BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781042|ref|YP_003065455.1| succinate dehydrogenase
hydrophobic membrane anchor [Candidatus Liberibacter asiaticus str.
psy62]
(130 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781042|ref|YP_003065455.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040719|gb|ACT57515.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter asiaticus str. psy62]
Length = 130
Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV
Sbjct: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS
Sbjct: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
Query: 121 LLKIAILGTL 130
LLKIAILGTL
Sbjct: 121 LLKIAILGTL 130
>gi|315122381|ref|YP_004062870.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495783|gb|ADR52382.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 128
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/126 (76%), Positives = 113/126 (89%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MRSSLG+VRGMGSAKDGTGHF+KQRFTAIANIPF+IFFI FFI+YG AP+EQIVSV+SN
Sbjct: 2 NMRSSLGKVRGMGSAKDGTGHFLKQRFTAIANIPFVIFFIIFFIRYGSAPHEQIVSVVSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ VASIMGLG +SI HMQLGMQVIIEDY+H +LLKI+ L +NS FVL + +FCLFS+LK
Sbjct: 62 LFVASIMGLGAVSIFFHMQLGMQVIIEDYVHSKLLKIVLLMLNSSFVLFMAVFCLFSILK 121
Query: 124 IAILGT 129
I+ILG
Sbjct: 122 ISILGN 127
>gi|325294013|ref|YP_004279877.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
sp. H13-3]
gi|325061866|gb|ADY65557.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
sp. H13-3]
Length = 126
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 94/125 (75%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+AN+P +IFF+ F IKY APY ++ + LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVANVPLLIFFVVFLIKYAGAPYPEVAAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL +S +HM+LGMQVIIEDY+H + K++ L +N+ F +L+ C+F++LK
Sbjct: 62 PLVAVIMGLVLVSGLIHMKLGMQVIIEDYVHGEVSKLVLLMLNTFFAVLIGGLCIFAILK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|241206663|ref|YP_002977759.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860553|gb|ACS58220.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 126
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F + Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFVFFMLAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI+ L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIVLLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|209551263|ref|YP_002283180.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537019|gb|ACI56954.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 126
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|86359477|ref|YP_471369.1| succinate dehydrogenase subunit D, membrane anchor protein
[Rhizobium etli CFN 42]
gi|86283579|gb|ABC92642.1| succinate dehydrogenase subunit D, membrane anchor protein
[Rhizobium etli CFN 42]
Length = 126
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLFS+LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIASLCLFSILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|116254177|ref|YP_770015.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|115258825|emb|CAK09931.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 126
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F + Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFVFFMLAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H K+ L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKVALLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|218671677|ref|ZP_03521346.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli GR56]
Length = 126
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+ANIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVANIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|190893745|ref|YP_001980287.1| succinate dehydrogenase, membrane anchor subunit [Rhizobium etli
CIAT 652]
gi|218515348|ref|ZP_03512188.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli 8C-3]
gi|190699024|gb|ACE93109.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli CIAT 652]
Length = 126
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|15889900|ref|NP_355581.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
tumefaciens str. C58]
gi|15157851|gb|AAK88366.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
tumefaciens str. C58]
Length = 126
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 94/125 (75%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF++QR TA+AN+P +IFF+ F IKY APY ++V+ LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFLRQRVTAVANVPLLIFFVIFLIKYAGAPYPEVVAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IM L +S +HM+LGMQVIIEDY+H + K++ L +N+ F +L+ +F++LK
Sbjct: 62 PLVAVIMALVLVSGLIHMKLGMQVIIEDYVHAEVSKLVLLMLNTFFAILIGGLSIFAILK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|222150047|ref|YP_002551004.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
vitis S4]
gi|221737029|gb|ACM37992.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
vitis S4]
Length = 126
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TAIAN+P ++FFI F + + APY +VS LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTEHFWRQRLTAIANVPLMLFFIIFMLTHAGAPYADVVSALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL +S +HM++GMQ II DYIH ++K+ + +N+ FV++ CLF++LK
Sbjct: 62 PLVAVIMGLVVLSGLIHMKIGMQEIIADYIHNEVMKMGLMMLNTFFVVITGALCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|218462021|ref|ZP_03502112.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli Kim 5]
Length = 123
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 89/123 (72%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 1 RTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSNPF 60
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LKIA
Sbjct: 61 VAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILKIA 120
Query: 126 ILG 128
+G
Sbjct: 121 FVG 123
>gi|227823651|ref|YP_002827624.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Sinorhizobium fredii NGR234]
gi|227342653|gb|ACP26871.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Sinorhizobium fredii NGR234]
Length = 126
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 90/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++N+P + FF+ F +Y AP+ ++V+ L+N
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVSNLPLLTFFVFFVARYAGAPHAEVVAALAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IM L IS VHM++GMQVIIEDY+H +KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVIMALVVISALVHMRIGMQVIIEDYVHAEGVKIALLMLNTFFAIAIGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|15966824|ref|NP_387177.1| succinate dehydrogenase membrane anchor subunit protein
[Sinorhizobium meliloti 1021]
gi|307301652|ref|ZP_07581411.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti BL225C]
gi|307316324|ref|ZP_07595768.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti AK83]
gi|15076096|emb|CAC47650.1| Probable succinate dehydrogenase membrane anchor subunit
[Sinorhizobium meliloti 1021]
gi|306898164|gb|EFN28906.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti AK83]
gi|306903350|gb|EFN33939.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti BL225C]
Length = 126
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 88/125 (70%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MR+ LG+VRG+GSAK+GT HF +QR TA+A+IP IFF+ F Y AP+ ++++ LSN
Sbjct: 2 NMRTPLGKVRGLGSAKEGTDHFWRQRLTAVASIPLTIFFVVFLAHYAGAPHAELIAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA MGL ++ VHM++GMQVIIEDY+H KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVTMGLMVVAGLVHMKIGMQVIIEDYVHGEGAKIALLMLNTFFTIAVGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|222087468|ref|YP_002546005.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Agrobacterium radiobacter K84]
gi|221724916|gb|ACM28072.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Agrobacterium radiobacter K84]
Length = 126
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+AN+P IFF+ F I Y APY ++V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVANVPLFIFFVIFLIIYAGAPYAEVVHALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL IS +HM+LGMQVIIEDY+H KI+ L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVIMGLMVISGIIHMKLGMQVIIEDYVHGEFGKIVLLMLNTFFSIVMAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|150398155|ref|YP_001328622.1| succinate dehydrogenase hydrophobic membrane anchor [Sinorhizobium
medicae WSM419]
gi|150029670|gb|ABR61787.1| Succinate dehydrogenase hydrophobic membrane anchor [Sinorhizobium
medicae WSM419]
Length = 126
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 87/125 (69%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ LG+VRG+GSAK+GT HF +QR TA+A+IP IFF+ F Y AP+ ++++ L+N
Sbjct: 2 SMRTPLGKVRGLGSAKEGTDHFWRQRVTAVASIPLTIFFVVFLAHYAGAPHAELLAALAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA MGL ++ VHM++GMQVIIEDY+H KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVTMGLMVVAGLVHMKIGMQVIIEDYVHGEGAKIALLMLNTFFTIAVGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|319780754|ref|YP_004140230.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166642|gb|ADV10180.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 131
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 88/127 (69%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ DMR+ L RVRG+GSA++GTGHF +QR TAIANIP I+FF+ F I A +E + + L
Sbjct: 5 NTDMRTPLARVRGLGSAREGTGHFWRQRLTAIANIPLILFFVGFLIALNGADHEHVRAAL 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+N VA +M L IS HM++GMQVIIEDY+H +K+ + +N+ F + + + +F+L
Sbjct: 65 ANPFVALVMALVLISGLTHMRIGMQVIIEDYVHGEGMKLALIALNTFFTIAVGVASIFAL 124
Query: 122 LKIAILG 128
LK+A G
Sbjct: 125 LKLAFGG 131
>gi|110635574|ref|YP_675782.1| succinate dehydrogenase subunit D [Mesorhizobium sp. BNC1]
gi|110286558|gb|ABG64617.1| succinate dehydrogenase subunit D [Chelativorans sp. BNC1]
Length = 127
Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 85/125 (68%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSA+ GT HF +QR TA++NIP IIFFI F Y + YE+I + L+
Sbjct: 3 DMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAALAQ 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A +MGL +S+ HM+LGMQVIIEDY+H KI + +N+ F +++ L+SLL+
Sbjct: 63 PVSALLMGLAFVSVLYHMRLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSLLR 122
Query: 124 IAILG 128
IA G
Sbjct: 123 IAFGG 127
>gi|13473608|ref|NP_105176.1| succinate dehydrogenase cytochrome b small subunit [Mesorhizobium
loti MAFF303099]
gi|14024358|dbj|BAB50962.1| succinate dehydrogenase cytochrome b small subunit [Mesorhizobium
loti MAFF303099]
Length = 132
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSA++GTGHF +QR TAIANIP +FF+ F I A Y ++ + L+N
Sbjct: 8 DMRTPLAKVRGLGSAREGTGHFWRQRLTAIANIPLTLFFVGFLIALNGAGYAEVRAALAN 67
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V ++ L IS +HM+LGMQVIIEDYI LK+ + +N+ F + + + +F+LLK
Sbjct: 68 PFVGLMLALVLISGLIHMRLGMQVIIEDYITSEGLKLATIALNTFFTVAVGVASIFALLK 127
Query: 124 IAILG 128
+A G
Sbjct: 128 LAFGG 132
>gi|17986444|ref|NP_539078.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. 16M]
gi|17982040|gb|AAL51342.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. 16M]
Length = 128
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+SLG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 1 MNNDMRTSLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 61 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 120
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 121 ILKLSFGG 128
>gi|260562820|ref|ZP_05833306.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260152836|gb|EEW87928.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
Length = 131
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+SLG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTSLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|254713681|ref|ZP_05175492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M644/93/1]
gi|254715968|ref|ZP_05177779.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M13/05/1]
gi|261217732|ref|ZP_05932013.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M13/05/1]
gi|261321420|ref|ZP_05960617.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M644/93/1]
gi|260922821|gb|EEX89389.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M13/05/1]
gi|261294110|gb|EEX97606.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M644/93/1]
Length = 131
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++++
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVLAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|163761420|ref|ZP_02168494.1| probable succinate dehydrogenase membrane anchor subunit protein
[Hoeflea phototrophica DFL-43]
gi|162281415|gb|EDQ31712.1| probable succinate dehydrogenase membrane anchor subunit protein
[Hoeflea phototrophica DFL-43]
Length = 127
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 83/125 (66%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MR+ L +VRG+GSAK+GT HF +QR TA+AN+P IIFFI F I Y PYE + LSN
Sbjct: 3 NMRTPLSKVRGLGSAKEGTDHFWRQRVTAVANVPLIIFFILFIIAYNGEPYEVVAGALSN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS VHM+LGMQVIIEDYIH K+ L N+ F + LFS+LK
Sbjct: 63 PLVAVLMGLVVISGLVHMRLGMQVIIEDYIHAEGAKVALLLFNTFFTAAIGAVSLFSVLK 122
Query: 124 IAILG 128
+ G
Sbjct: 123 LGFGG 127
>gi|254700547|ref|ZP_05162375.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis bv. 5 str. 513]
gi|261751051|ref|ZP_05994760.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 5 str. 513]
gi|261740804|gb|EEY28730.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 5 str. 513]
Length = 131
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 88/128 (68%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVWAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|148559156|ref|YP_001259727.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ovis ATCC 25840]
gi|161619820|ref|YP_001593707.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella canis ATCC 23365]
gi|163843926|ref|YP_001628330.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis ATCC 23445]
gi|225628103|ref|ZP_03786138.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti str. Cudo]
gi|225853340|ref|YP_002733573.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis ATCC 23457]
gi|254704917|ref|ZP_05166745.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis bv. 3 str. 686]
gi|254707569|ref|ZP_05169397.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis M163/99/10]
gi|254708894|ref|ZP_05170705.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis B2/94]
gi|254717970|ref|ZP_05179781.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. 83/13]
gi|256030420|ref|ZP_05444034.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis M292/94/1]
gi|256045511|ref|ZP_05448394.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. Rev.1]
gi|256059879|ref|ZP_05450066.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella neotomae 5K33]
gi|256112238|ref|ZP_05453159.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis bv. 3 str. Ether]
gi|256158404|ref|ZP_05456302.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M490/95/1]
gi|256253824|ref|ZP_05459360.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti B1/94]
gi|256263173|ref|ZP_05465705.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|256370305|ref|YP_003107816.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella microti CCM 4915]
gi|260169331|ref|ZP_05756142.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella sp. F5/99]
gi|260567608|ref|ZP_05838078.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261220958|ref|ZP_05935239.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
B1/94]
gi|261315054|ref|ZP_05954251.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M163/99/10]
gi|261316389|ref|ZP_05955586.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis B2/94]
gi|261323850|ref|ZP_05963047.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
neotomae 5K33]
gi|261755613|ref|ZP_05999322.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 3 str. 686]
gi|261758846|ref|ZP_06002555.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|265982913|ref|ZP_06095648.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella sp.
83/13]
gi|265987462|ref|ZP_06100019.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M292/94/1]
gi|265991934|ref|ZP_06104491.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 1 str. Rev.1]
gi|265993666|ref|ZP_06106223.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 3 str. Ether]
gi|265996917|ref|ZP_06109474.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M490/95/1]
gi|294851144|ref|ZP_06791817.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella sp. NVSL 07-0026]
gi|306838922|ref|ZP_07471749.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. NF 2653]
gi|306842943|ref|ZP_07475577.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO2]
gi|306843358|ref|ZP_07475959.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO1]
gi|148370413|gb|ABQ60392.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ovis ATCC 25840]
gi|161336631|gb|ABX62936.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella canis ATCC 23365]
gi|163674649|gb|ABY38760.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis ATCC 23445]
gi|225616928|gb|EEH13975.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti str. Cudo]
gi|225641705|gb|ACO01619.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis ATCC 23457]
gi|256000468|gb|ACU48867.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella microti CCM 4915]
gi|260157126|gb|EEW92206.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260919542|gb|EEX86195.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
B1/94]
gi|261295612|gb|EEX99108.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis B2/94]
gi|261299830|gb|EEY03327.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
neotomae 5K33]
gi|261304080|gb|EEY07577.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M163/99/10]
gi|261738830|gb|EEY26826.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|261745366|gb|EEY33292.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 3 str. 686]
gi|262551385|gb|EEZ07375.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M490/95/1]
gi|262764647|gb|EEZ10568.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 3 str. Ether]
gi|263003000|gb|EEZ15293.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 1 str. Rev.1]
gi|263093079|gb|EEZ17229.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|264659659|gb|EEZ29920.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M292/94/1]
gi|264661505|gb|EEZ31766.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella sp.
83/13]
gi|294819733|gb|EFG36732.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella sp. NVSL 07-0026]
gi|306276049|gb|EFM57749.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO1]
gi|306286871|gb|EFM58396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO2]
gi|306405992|gb|EFM62244.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. NF 2653]
gi|326409904|gb|ADZ66969.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis M28]
gi|326539617|gb|ADZ87832.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis M5-90]
Length = 131
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 88/128 (68%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|260464203|ref|ZP_05812396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium opportunistum WSM2075]
gi|259030006|gb|EEW31289.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium opportunistum WSM2075]
Length = 131
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L RVRG+GSA++GTGHF +QR TAIANIP I+FF+ F I A + ++ + L+N
Sbjct: 7 DMRTPLARVRGLGSAREGTGHFWRQRLTAIANIPLILFFVGFLIALNGAGFAEVRAALAN 66
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA ++ L +S +HM++GMQVIIEDY+H +K+ + +N+ F + + + +F+LLK
Sbjct: 67 PFVALVVALVLVSGLIHMRIGMQVIIEDYVHGEGMKLALIALNTFFTVAVGVTSIFALLK 126
Query: 124 IAILG 128
+A G
Sbjct: 127 LAFGG 131
>gi|153008287|ref|YP_001369502.1| succinate dehydrogenase hydrophobic membrane anchor [Ochrobactrum
anthropi ATCC 49188]
gi|151560175|gb|ABS13673.1| Succinate dehydrogenase hydrophobic membrane anchor [Ochrobactrum
anthropi ATCC 49188]
Length = 131
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 86/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GTGHF QR +A A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTGHFWYQRLSAAALVPLVMFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +K++ + +N+ F ++ C+F+
Sbjct: 64 LSHPFTAIVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKVVLVMLNTFFTAVVGFACIFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|23502754|ref|NP_698881.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis 1330]
gi|23348772|gb|AAN30796.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella suis 1330]
Length = 131
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L + HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLMGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|239833034|ref|ZP_04681363.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ochrobactrum intermedium LMG 3301]
gi|239825301|gb|EEQ96869.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ochrobactrum intermedium LMG 3301]
Length = 131
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GTGHF QR +A+A +P ++FFI + A + ++ +
Sbjct: 4 MNKDMRTPLGKVRGLGSAKEGTGHFWYQRLSAVALVPLVMFFIGLVVSLNGASFAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +K++ + +NS F ++ C+F+
Sbjct: 64 LSHPFTAIVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKVVLVMLNSFFTAVVGFACIFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|62290759|ref|YP_222552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus bv. 1 str. 9-941]
gi|82700670|ref|YP_415244.1| hypothetical protein BAB1_1902 [Brucella melitensis biovar Abortus
2308]
gi|189024972|ref|YP_001935740.1| succinate dehydrogenase [Brucella abortus S19]
gi|237816265|ref|ZP_04595258.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus str. 2308 A]
gi|254690048|ref|ZP_05153302.1| succinate dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|254694536|ref|ZP_05156364.1| succinate dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|254696161|ref|ZP_05157989.1| succinate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|254731079|ref|ZP_05189657.1| succinate dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|256258301|ref|ZP_05463837.1| succinate dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|260546024|ref|ZP_05821764.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260755582|ref|ZP_05867930.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 6 str. 870]
gi|260758808|ref|ZP_05871156.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 4 str. 292]
gi|260760532|ref|ZP_05872875.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 2 str. 86/8/59]
gi|260884608|ref|ZP_05896222.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 9 str. C68]
gi|261214855|ref|ZP_05929136.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 3 str. Tulya]
gi|297247146|ref|ZP_06930864.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella abortus bv. 5 str. B3196]
gi|62196891|gb|AAX75191.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus bv. 1 str. 9-941]
gi|82616771|emb|CAJ11858.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
gi|189020544|gb|ACD73266.1| succinate dehydrogenase [Brucella abortus S19]
gi|237788332|gb|EEP62547.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus str. 2308 A]
gi|260096131|gb|EEW80007.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260669126|gb|EEX56066.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 4 str. 292]
gi|260670964|gb|EEX57785.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 2 str. 86/8/59]
gi|260675690|gb|EEX62511.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 6 str. 870]
gi|260874136|gb|EEX81205.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 9 str. C68]
gi|260916462|gb|EEX83323.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 3 str. Tulya]
gi|297174315|gb|EFH33662.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella abortus bv. 5 str. B3196]
Length = 131
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRIPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|49476234|ref|YP_034275.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella henselae str. Houston-1]
gi|49239042|emb|CAF28342.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella henselae str. Houston-1]
Length = 128
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 81/128 (63%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF QR T N+P +IFFI + Y I +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLQRLTGFINLPLLIFFIVLILSLVGKDYSIIRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T+S+ HM+LGMQV+IEDYI L+I+FL +N F +L +F+
Sbjct: 61 LAHPVVAVLMGLLTLSVLYHMKLGMQVVIEDYIPREGLRIIFLVLNILFCFVLGGIIVFA 120
Query: 121 LLKIAILG 128
LLKIAI G
Sbjct: 121 LLKIAIGG 128
>gi|307942784|ref|ZP_07658129.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseibium sp. TrichSKD4]
gi|307773580|gb|EFO32796.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseibium sp. TrichSKD4]
Length = 127
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I + YE +++ L N
Sbjct: 3 DMRTPLAKVRGLGSAKDGTEHFWRQRVTAVANVFLISFFVILVISMQGSSYEDMIATLQN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +M + +S HM+LGMQVIIEDYIH +K++ + N+ F L+ +F++LK
Sbjct: 63 PLVAILMLMVILSGVYHMKLGMQVIIEDYIHSEGVKVLAVLGNTFFSALIGFGTVFAVLK 122
Query: 124 IAILG 128
I G
Sbjct: 123 IGFGG 127
>gi|154245909|ref|YP_001416867.1| succinate dehydrogenase hydrophobic membrane anchor [Xanthobacter
autotrophicus Py2]
gi|154159994|gb|ABS67210.1| Succinate dehydrogenase hydrophobic membrane anchor [Xanthobacter
autotrophicus Py2]
Length = 135
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 81/125 (64%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR++LGRVRG+GSA+ GT HF KQR T +AN+ +I FI I + Y + L +
Sbjct: 11 PMRTALGRVRGLGSARSGTDHFFKQRVTGLANLILMIAFIGIVISLAGSSYAATRATLGH 70
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA ++ L +S++ HM++GMQV+IEDYIH LK+M + N+ F + + + F++LK
Sbjct: 71 PFVAVVILLTLLSVTTHMRIGMQVVIEDYIHTEALKVMLIVANTFFSIAIALAGAFAVLK 130
Query: 124 IAILG 128
I++ G
Sbjct: 131 ISLGG 135
>gi|254503995|ref|ZP_05116146.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Labrenzia alexandrii DFL-11]
gi|222440066|gb|EEE46745.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Labrenzia alexandrii DFL-11]
Length = 127
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 79/125 (63%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+V G+GSAKDGT HF KQR TA+AN+ I FF+ I + + +V L N
Sbjct: 3 DMRTPLGKVLGLGSAKDGTDHFWKQRLTAVANVFLISFFVILVISMQGSSHGDVVETLQN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ I+ L +S HM+LGMQVIIEDYIH LK + + N+ F + + C+F++LK
Sbjct: 63 PLVSIILLLVILSGVYHMKLGMQVIIEDYIHGEALKFLTVMANTFFCVFIGFGCIFAVLK 122
Query: 124 IAILG 128
I G
Sbjct: 123 IGFGG 127
>gi|240851319|ref|YP_002972722.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella grahamii as4aup]
gi|240268442|gb|ACS52030.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella grahamii as4aup]
Length = 128
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF QR T + N+P +IFFI + Y + +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLQRLTGLVNLPLLIFFIVLILSLVGKDYSIVRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T S+ HM+LGMQV+IEDYI +I FL +N F L+ +FS
Sbjct: 61 LAHPVVAILMGLMTFSVLYHMKLGMQVVIEDYIPREGFRIFFLTLNISFCFLIGGVIIFS 120
Query: 121 LLKIAILG 128
LLKIA+ G
Sbjct: 121 LLKIALGG 128
>gi|118590534|ref|ZP_01547936.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Stappia aggregata IAM 12614]
gi|118436997|gb|EAV43636.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Stappia aggregata IAM 12614]
Length = 127
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 78/125 (62%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAK+GT HF KQR TA+AN+ I FF+ I + + +V L N
Sbjct: 3 DMRTPLNKVRGLGSAKEGTDHFWKQRLTAVANVFLISFFVILVIAMQGSTHADVVETLKN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ I+ L +S HM+LGMQVIIEDY+H +K + L N+ F + C+F++LK
Sbjct: 63 PLVSIILLLVILSGVYHMKLGMQVIIEDYVHGEGIKFLTLMANTFFCAFIGFGCVFAVLK 122
Query: 124 IAILG 128
I G
Sbjct: 123 IGFGG 127
>gi|90421133|ref|ZP_01229035.1| succinate dehydrogenase hydrophobic membrane anchor, SdhD
[Aurantimonas manganoxydans SI85-9A1]
gi|90334625|gb|EAS48405.1| succinate dehydrogenase hydrophobic membrane anchor, SdhD
[Aurantimonas manganoxydans SI85-9A1]
Length = 126
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MR+SL RVRG+GSA +GTGHF +QR +AI+N+ I F+ I D PY ++ + L++
Sbjct: 3 EMRTSLRRVRGLGSAHEGTGHFWQQRLSAISNLVLITGFVILLIVLHDQPYAEVRAALAH 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V ++ L IS + HM+LGMQVIIEDY+H K+ L +N+ F + + + LF++ +
Sbjct: 63 PLVGLLVALTVISFTYHMRLGMQVIIEDYVH-GTTKLPLLILNNFFAIAIAVASLFAIAR 121
Query: 124 IA 125
++
Sbjct: 122 MS 123
>gi|49474756|ref|YP_032798.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella quintana str. Toulouse]
gi|49240260|emb|CAF26730.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella quintana str. Toulouse]
Length = 128
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 80/126 (63%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D ++ LG+VRG+GSA++GT HF +R T++ N+P IFFI + Y + +
Sbjct: 1 MKKDFQTELGKVRGLGSAREGTEHFWLERLTSVLNLPLCIFFIVLILSLIGKDYTIVHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V +MGL T S+ HM+L MQV+IEDYI L+I+FL +N F +L +F+
Sbjct: 61 LSHPVVTILMGLLTFSVLYHMKLEMQVVIEDYIRREGLRILFLVLNVSFCFVLGGIIIFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|328541810|ref|YP_004301919.1| Succinate dehydrogenase, hydrophobic membrane anchor protein
[polymorphum gilvum SL003B-26A1]
gi|326411562|gb|ADZ68625.1| Succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Polymorphum gilvum SL003B-26A1]
Length = 127
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 79/125 (63%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I A Y+++ + L N
Sbjct: 3 DMRTPLAKVRGLGSAKDGTEHFWRQRVTAVANVFLISFFVITLISLQGAGYDEVRTCLGN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +M L S HM+LGMQVIIEDY+H +K + L N+ F + + +F++LK
Sbjct: 63 PIVAILMLLVIASGVYHMKLGMQVIIEDYVHGDGVKFLALMANTFFCAFIGLGSVFAVLK 122
Query: 124 IAILG 128
+ G
Sbjct: 123 LGFGG 127
>gi|158425368|ref|YP_001526660.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azorhizobium caulinodans ORS 571]
gi|158332257|dbj|BAF89742.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azorhizobium caulinodans ORS 571]
Length = 128
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M MR+ LGRVRG+GSA+ GT HF QR TAI N+ ++ + I A Y +
Sbjct: 1 MHSPMRTPLGRVRGLGSARSGTEHFFLQRLTAIGNLILVVITLGIMISLLGAGYNAAHAT 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L N VA ++ L +S++ HM++GMQV+IEDY+H LK+ + N+ F ++ + F+
Sbjct: 61 LGNPIVAVVILLLLLSVTTHMRIGMQVVIEDYVHSEGLKVALIIANTFFTTVVGLAGAFA 120
Query: 121 LLKIAILG 128
+LKI++ G
Sbjct: 121 VLKISLGG 128
>gi|254471020|ref|ZP_05084423.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudovibrio sp. JE062]
gi|211960162|gb|EEA95359.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudovibrio sp. JE062]
Length = 127
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 78/125 (62%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I A Y L N
Sbjct: 3 DMRTPLAKVRGLGSAKDGTTHFWRQRVTAVANVFLISFFVILVIALQGADYASFTEALQN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ ++ L + +HM+LGMQVIIEDYIH LK++ L N FV ++ + + ++LK
Sbjct: 63 PVISILLLLVILVGCLHMKLGMQVIIEDYIHSEGLKLLLLMGNIFFVSIIALSSVVAVLK 122
Query: 124 IAILG 128
I+ G
Sbjct: 123 ISFGG 127
>gi|319409392|emb|CBI83036.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella schoenbuchensis R1]
Length = 128
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 78/126 (61%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ G+VRG GSA +GTGHF + T ++ IFFI I Y+ I +
Sbjct: 1 MKKDFRTEFGKVRGFGSAHEGTGHFWLENLTGFTSVLLWIFFIVLVISLVGEGYDVIYAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ VA +MGL T S +M+LGMQV+IEDYI + L+I+FL +N+ F +L F +F+
Sbjct: 61 LSHPIVAVLMGLMTFSSLYYMKLGMQVVIEDYIPHGNLRILFLVLNTLFCCVLGGFIIFA 120
Query: 121 LLKIAI 126
LLKI +
Sbjct: 121 LLKIVL 126
>gi|121602811|ref|YP_988427.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Bartonella bacilliformis KC583]
gi|120614988|gb|ABM45589.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Bartonella bacilliformis KC583]
Length = 128
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M ++R+ LG+VRG+GSA GT HF Q T+ NIP +IFFI I Y I +
Sbjct: 1 MKKNLRTELGKVRGLGSAHKGTEHFWVQNLTSWINIPLLIFFIILMISLAGEDYSTIHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ + M L S HM+L MQV+IEDYI ++++++ FL +N + L+ +F+
Sbjct: 61 LSHPVILVFMVLTVFSNLYHMKLEMQVVIEDYIPHKIIRMFFLILNISYCCLIGSLIIFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|170744095|ref|YP_001772750.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium sp. 4-46]
gi|168198369|gb|ACA20316.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium sp. 4-46]
Length = 137
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 80/122 (65%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+R+S RV+G+G A GTG + R TA++N+P I+ F+ YE V ++S+
Sbjct: 12 IRTSYARVQGLGPAHHGTGEWWLHRVTAVSNVPLILSFVVIVALCAGRSYEDAVRLVSHP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA ++ LG +S++ HM++GMQ++IEDY+H + LKI + N+ + ++ + CL+++++I
Sbjct: 72 LVAILLILGVLSVTNHMRMGMQIVIEDYVHDKGLKIAAVIANTFYSTVVAVACLYAIVRI 131
Query: 125 AI 126
++
Sbjct: 132 SL 133
>gi|304394276|ref|ZP_07376199.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ahrensia sp. R2A130]
gi|303293716|gb|EFL88093.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ahrensia sp. R2A130]
Length = 136
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
MD D R+ L RVRG+GSAKDGT HF QR TA+AN+ I FF+ + A +E+ V+
Sbjct: 1 MDQDFRTPLSRVRGLGSAKDGTQHFWHQRLTAMANLVLITFFVWTVVALNGATWEETVAY 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIH 94
LS+ VA +M + + HM+LGMQVIIEDY+H
Sbjct: 61 LSSPLVAIVMVMVLGAGIYHMKLGMQVIIEDYVH 94
>gi|220926985|ref|YP_002502287.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium nodulans ORS 2060]
gi|219951592|gb|ACL61984.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium nodulans ORS 2060]
Length = 137
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 80/122 (65%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+R++ RV+G+G A GT + R TA++NIP I+ F+ YE V ++S+
Sbjct: 12 IRTAYARVQGLGPAHHGTSEWWLHRVTAVSNIPLIVSFVVIVALCAGRSYEDAVRLVSHP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA ++ LG +S++ HM++G+Q++IEDY+H + LKI + N+ + +++ + CL+++++I
Sbjct: 72 LVAILLILGVLSVTNHMRMGLQIVIEDYVHDKGLKIAAVIANTFYSVVVAVACLYAIVRI 131
Query: 125 AI 126
++
Sbjct: 132 SL 133
>gi|163853007|ref|YP_001641050.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium extorquens PA1]
gi|163664612|gb|ABY31979.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium extorquens PA1]
Length = 139
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++S
Sbjct: 12 LSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALVS 71
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL+++L
Sbjct: 72 HPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAIL 131
Query: 123 KIAILG 128
++++ G
Sbjct: 132 RVSLGG 137
>gi|218531817|ref|YP_002422633.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium chloromethanicum CM4]
gi|240140348|ref|YP_002964827.1| Succinate dehydrogenase delta subunit [Methylobacterium extorquens
AM1]
gi|254562943|ref|YP_003070038.1| succinate dehydrogenase, membrane anchor subunit [Methylobacterium
extorquens DM4]
gi|27902657|gb|AAO24620.1| succinate dehydrogenase delta subunit [Methylobacterium extorquens]
gi|218524120|gb|ACK84705.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium chloromethanicum CM4]
gi|240010324|gb|ACS41550.1| Succinate dehydrogenase delta subunit [Methylobacterium extorquens
AM1]
gi|254270221|emb|CAX26215.1| succinate dehydrogenase, membrane anchor subunit [Methylobacterium
extorquens DM4]
Length = 139
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++S
Sbjct: 12 LSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALVS 71
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL+++L
Sbjct: 72 HPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAIL 131
Query: 123 KIAILG 128
++++ G
Sbjct: 132 RVSLGG 137
>gi|300024742|ref|YP_003757353.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299526563|gb|ADJ25032.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomicrobium denitrificans ATCC 51888]
Length = 126
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 73/121 (60%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ L R +GSAK+G HF KQR TA+AN+ +F + + A Y + L N
Sbjct: 3 MRTPLKTARYLGSAKEGADHFWKQRVTAVANVVLAVFLVWLVVSLTGADYATVKRQLGNP 62
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA + +S ++HM+LGMQ IIEDY+H KI+ L +N+ F +++ + +FS+LK+
Sbjct: 63 LVALGLLSLVLSGAIHMRLGMQTIIEDYVHGEGAKIVALMLNTFFTIVVALVSIFSVLKL 122
Query: 125 A 125
+
Sbjct: 123 S 123
>gi|319406314|emb|CBI79951.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella sp. AR 15-3]
Length = 128
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + S
Sbjct: 1 MEKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYSVVYSR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
S+ VA +MGL S +M+LGMQV+IEDYI ++I FL +N F LL +F+
Sbjct: 61 FSHPIVAVLMGLIIFSSLYYMKLGMQVVIEDYIPNEGMRIFFLVLNILFCFLLGSIMMFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|188583473|ref|YP_001926918.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium populi BJ001]
gi|179346971|gb|ACB82383.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium populi BJ001]
Length = 139
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 74/126 (58%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ RV+G+G++ G HF QR T +N ++ F+ Y Q V+++S
Sbjct: 12 LSMRTPRARVKGLGASGHGASHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALVS 71
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL++++
Sbjct: 72 HPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAII 131
Query: 123 KIAILG 128
++++ G
Sbjct: 132 RVSLGG 137
>gi|298293273|ref|YP_003695212.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Starkeya novella DSM 506]
gi|296929784|gb|ADH90593.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Starkeya novella DSM 506]
Length = 136
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ RV G+GSA+ GTGHF QR TA++N+ +I + I + +V+ L N
Sbjct: 13 MRTPRRRVAGLGSARSGTGHFWLQRVTALSNLILVIIALPIVIAVAGEGHAGVVATLGNP 72
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA ++ L +S+ +HM++GMQV+IEDY+H +K++ L N+ F + F++LKI
Sbjct: 73 LVAIVLLLLLLSVCMHMRIGMQVVIEDYVHAEGVKVLALIANTFFTTAVGFAGAFAILKI 132
Query: 125 AILG 128
+ G
Sbjct: 133 SFGG 136
>gi|254292678|ref|YP_003058701.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hirschia baltica ATCC 49814]
gi|254041209|gb|ACT58004.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hirschia baltica ATCC 49814]
Length = 132
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFI------KYGDAPY 54
M MR+ LG+VRG+GSA+DG GHFI QR +A+A ++F + +F+ GD
Sbjct: 1 MSNSMRTPLGKVRGLGSARDGAGHFIGQRVSAVA----LVFLVPWFLISLLGATRGDNTL 56
Query: 55 EQIVSV---LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVL 111
E+ + LS A ++ L HM+LG+QV+IEDYI + +I+ L +N+
Sbjct: 57 ERFANAEAWLSQPLNAILVLLAVCGTIYHMRLGLQVVIEDYISGHMPRIVLLMLNTFLSF 116
Query: 112 LLIIFCLFSLLKIAI 126
LI +FS+ K+A+
Sbjct: 117 ALIAATVFSVFKVAV 131
>gi|319899435|ref|YP_004159532.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella clarridgeiae 73]
gi|319403403|emb|CBI76971.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella clarridgeiae 73]
Length = 128
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + S
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYNVVHSR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
S+ V +MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 FSHPIVTVLMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|319407789|emb|CBI81440.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella sp. 1-1C]
Length = 128
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + +
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYSVVHAK 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 LSHPMVTVWMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|163796398|ref|ZP_02190358.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [alpha proteobacterium BAL199]
gi|159178248|gb|EDP62792.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [alpha proteobacterium BAL199]
Length = 132
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ L RVRG+GSAK+G H+ QR TAIA +P I+F+ + V+ + +
Sbjct: 8 SMRNPLARVRGLGSAKEGVHHWWAQRLTAIALVPLTIWFVISIAGLAGVDHAGAVAWIGS 67
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA ++ L ++ H QLG+QV+IEDY+H +K+ L + L + +F++L+
Sbjct: 68 APVAVLLVLLIAAVYWHAQLGVQVVIEDYVHNEAVKLTALIALKFAAIALGVASIFAVLR 127
Query: 124 IA 125
+A
Sbjct: 128 LA 129
>gi|319404829|emb|CBI78430.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella rochalimae ATCC BAA-1498]
Length = 128
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 70/126 (55%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FI + Y + +
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTLFIILVMSCVGKDYSVVHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 LSHPMVTVWMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAI 126
LLKIA+
Sbjct: 121 LLKIAL 126
>gi|114320489|ref|YP_742172.1| succinate dehydrogenase subunit D [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226883|gb|ABI56682.1| succinate dehydrogenase subunit D [Alkalilimnicola ehrlichii
MLHE-1]
Length = 126
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
++R+++ +G+GSAKDG H+ QR TA+A +P +++ ++G A YE V+ ++N
Sbjct: 2 NLRTNIKEAQGLGSAKDGVSHWWLQRLTAVALVPLMLWLAFGLARHGGAGYEATVAWVAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ L ++ H++LG+QV+IEDY+H K L +LL + ++L+
Sbjct: 62 PMTTVLWVLSLAALFWHIKLGLQVVIEDYVHDERAKFASLIAMKFITVLLAAIAILAVLR 121
Query: 124 IAI 126
+A+
Sbjct: 122 VAL 124
>gi|163869247|ref|YP_001610503.1| SdhD succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella tribocorum CIP 105476]
gi|161018950|emb|CAK02508.1| SdhD succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella tribocorum CIP 105476]
Length = 128
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF +R T N+P +IF I + Y + +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLERLTGFINLPLLIFLIVLILSLVGKDYAIVRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T+S+ HM+L MQV+IEDYI ++ FL +N F + +FS
Sbjct: 61 LAHPIVAILMGLMTLSVIYHMKLVMQVVIEDYIPREGFRLFFLILNILFCFFIGGVIIFS 120
Query: 121 LLKIAILG 128
LLKIA+ G
Sbjct: 121 LLKIALGG 128
>gi|218679248|ref|ZP_03527145.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Rhizobium etli CIAT 894]
Length = 81
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 54/80 (67%)
Query: 49 YGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
Y APY +V LSN VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+
Sbjct: 2 YAGAPYADVVRALSNPFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTF 61
Query: 109 FVLLLIIFCLFSLLKIAILG 128
F +L+ CLF++LKIA +G
Sbjct: 62 FAILIAGLCLFAILKIAFVG 81
>gi|148554232|ref|YP_001261814.1| succinate dehydrogenase subunit D [Sphingomonas wittichii RW1]
gi|148499422|gb|ABQ67676.1| succinate dehydrogenase subunit D [Sphingomonas wittichii RW1]
Length = 129
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSAK G H+ +QR TA N+ +F+ + + ++ +V + + V
Sbjct: 5 TGIGRVRGLGSAKHGAMHWWRQRVTAAGNLLLATWFVVSLFRLPNLGHDVVVQWIGSPIV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L T+S+ HM+LG+QV++EDY+H K+ L + + + + +FS+LKIA
Sbjct: 65 AVPLVLLTVSVFYHMRLGLQVVLEDYVHEDAGKVFSLLLLNLYTIAGAALAIFSILKIAF 124
Query: 127 LG 128
G
Sbjct: 125 GG 126
>gi|23014377|ref|ZP_00054197.1| COG2142: Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 127
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+ S +GR RG+GSAK+G H+I QR TAI IP ++F I A Y + ++
Sbjct: 4 LESPVGRARGLGSAKEGASHWIAQRVTAIFLIPLSLWFAVSVIGLSHADYATFKAWMAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+S++ L +++ H QLG+QV+IEDY+H K+ L + + L +F S+LK+
Sbjct: 64 GNSSLLLLTVLTVLYHAQLGLQVVIEDYVHCECKKVAALVGSKLVIAFLAVFMTVSILKV 123
Query: 125 AI 126
AI
Sbjct: 124 AI 125
>gi|319777840|ref|YP_004134270.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317171559|gb|ADV15096.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 129
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+R+ L RVRG+GSAK GT F+ +R T+ A + +I+ +A I+ P + ++ V+ +
Sbjct: 6 SIRTPLARVRGLGSAKHGTETFMLERLTSAALLILVIYIVAVVIRLSGEPRDVVIRVVGS 65
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ VA + + VHM+LGMQ IIEDY H +LK + L N F + + F++L
Sbjct: 66 IYVAPALIAFILVNCVHMRLGMQSIIEDYCHATVLKSVLLIANWLFCWAVALASFFAVLV 125
Query: 124 IA 125
I+
Sbjct: 126 IS 127
>gi|85374259|ref|YP_458321.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erythrobacter litoralis HTCC2594]
gi|84787342|gb|ABC63524.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erythrobacter litoralis HTCC2594]
Length = 128
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+SLGRVRG+GSAK+G H+I QRFTAI N+ +++ +A FI + Y+ + L++
Sbjct: 5 TSLGRVRGLGSAKEGAHHWIVQRFTAIGNVVLMLWLVASFILLPNLSYDTVSGWLASPIP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIH 94
A+ M L +S+ H +LG+ V+IEDY+H
Sbjct: 65 AAAMVLLIVSVFWHARLGLTVLIEDYVH 92
>gi|83313050|ref|YP_423314.1| succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magneticum AMB-1]
gi|82947891|dbj|BAE52755.1| Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magneticum AMB-1]
Length = 126
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+ S +GR RG+GSAK+G GH+I QR TAI IP ++F I A Y + ++
Sbjct: 2 SLESPVGRARGLGSAKEGAGHWIAQRVTAIFLIPLSLWFAVSVIGLSHADYATFKAWMAK 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+S++ L +++ H QLG+QV+IEDY+ KI L + + L +F S+LK
Sbjct: 62 PGNSSLLLLTVLTVLYHAQLGLQVVIEDYVSCECKKIAALVGSKLIIAFLAVFMTVSILK 121
Query: 124 IAI 126
+AI
Sbjct: 122 VAI 124
>gi|312112887|ref|YP_004010483.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311218016|gb|ADP69384.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 130
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Query: 6 RSSLGRVRGMGSA--KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
R+ L +VRG+GSA GT HF QR TA++N+ + F + + AP + + +
Sbjct: 7 RTELKKVRGLGSAIGGPGTDHFWAQRLTAVSNLFVVAFLVYTGLTLAGAPLGDVKAFFGH 66
Query: 64 V--AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
A+ASI L IS ++HM+LGMQV +E+Y+ + LK+ FLF+N+ FV+++ + + S+
Sbjct: 67 PFNAIASI--LVVISTAIHMRLGMQVPVEEYMPHG-LKVPFLFLNTFFVIVIAVVGVLSI 123
Query: 122 LKI 124
LK+
Sbjct: 124 LKL 126
>gi|114328743|ref|YP_745900.1| succinate dehydrogenase membrane anchor subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114316917|gb|ABI62977.1| succinate dehydrogenase membrane anchor subunit [Granulibacter
bethesdensis CGDNIH1]
Length = 132
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+GSAK G H+ +R T++A +P ++FI + ++ + +
Sbjct: 11 MRSHLGRARGLGSAKHGLTHWWAERVTSVALVPLTLWFIFAALHLTGHSRAEVAQWVGHP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ + H+QLG+QVIIEDY+H +KI L LL + C S+LK+
Sbjct: 71 VHAVLLLSLVFATFHHVQLGLQVIIEDYVHTESVKIASLLATKAVCFLLGLACAVSILKM 130
Query: 125 AI 126
+
Sbjct: 131 TL 132
>gi|146337398|ref|YP_001202446.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bradyrhizobium sp. ORS278]
gi|146190204|emb|CAL74196.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bradyrhizobium sp. ORS278]
Length = 124
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ LGRVR +G+A GTG F +QR TA+A I+ + I +L ++
Sbjct: 1 MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+A IM L ++ HM++GMQVIIEDY+H LK++ + N+ F + + I +++L+K+
Sbjct: 61 PIALIMLLFVVASCWHMKIGMQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKL 120
Query: 125 A 125
+
Sbjct: 121 S 121
>gi|83944806|ref|ZP_00957172.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Oceanicaulis alexandrii HTCC2633]
gi|83851588|gb|EAP89443.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Oceanicaulis alexandrii HTCC2633]
Length = 125
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
D R+ L + RG+GSAK G GHFI QR +A+A + + F+ A Y + + +
Sbjct: 3 DFRTPLAKARGLGSAKSGVGHFIAQRVSALALVILVPLFVWAVASLPGADYASAYAFVGS 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A + L + HM+LG+QV+IEDYIH + K + L N+ L + L+++L
Sbjct: 63 PYGAILTLLTLTAALYHMRLGLQVVIEDYIHKPMSKALLLIANTLICAGLWVAALYAVLA 122
Query: 124 IA 125
IA
Sbjct: 123 IA 124
>gi|332188518|ref|ZP_08390238.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingomonas sp. S17]
gi|332011423|gb|EGI53508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingomonas sp. S17]
Length = 127
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 5 MRS--SLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MRS ++GRVRG+GSAK GT H++ QR TA +N +++ + ++ Y + L+
Sbjct: 1 MRSGTAIGRVRGLGSAKSGTHHWLNQRLTAGSNFLLVVWLLISILRQPSYDYAAMRLWLA 60
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
N A M + SI HM+LG+QV+IEDY + + + MN FV + +FS+L
Sbjct: 61 NPWAAIPMVMLVASIFYHMRLGLQVVIEDYEQDQNRVALLVVMN-LFVFTIAAVAIFSIL 119
Query: 123 KIA 125
KIA
Sbjct: 120 KIA 122
>gi|103488507|ref|YP_618068.1| succinate dehydrogenase, cytochrome b subunit [Sphingopyxis
alaskensis RB2256]
gi|98978584|gb|ABF54735.1| succinate dehydrogenase subunit D [Sphingopyxis alaskensis RB2256]
Length = 134
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 74/120 (61%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ LGRVRG+GS+ G+ H+++QR TA+ NI + F ++ A + ++ SN +V
Sbjct: 5 TRLGRVRGLGSSHHGSHHWLQQRLTALGNILLVSFLFVSLLRLPLADHGAVLRWASNPSV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L IS+ H++LG+QV+IEDYIH ++ L + + + + + +F++++IA+
Sbjct: 65 ALALILMVISVFWHLRLGLQVMIEDYIHGEATRLFALVLLNFYAIGGAAYGIFAIVRIAL 124
>gi|94496885|ref|ZP_01303459.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphingomonas sp. SKA58]
gi|94423561|gb|EAT08588.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphingomonas sp. SKA58]
Length = 129
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 64/95 (67%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSAK+G H++ QR+TA+ N+ +++ + I Y+ +V+ ++N V
Sbjct: 5 TGIGRVRGLGSAKEGAHHWLTQRYTAVGNLLLVLWLLFSLISLPGLDYDSVVAWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
A M L +SI +H++LGMQV++EDY+H + L +
Sbjct: 65 AVPMMLMLVSIFLHLRLGMQVMLEDYVHDKGLNFL 99
>gi|307822159|ref|ZP_07652391.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacter tundripaludum SV96]
gi|307736725|gb|EFO07570.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacter tundripaludum SV96]
Length = 126
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
D R+ L RV+G+GSAKDGT H+ QR TA+A IP + I F APY+Q V L++
Sbjct: 2 DYRTPLSRVKGLGSAKDGTTHWWMQRVTAVALIPLSFWLIYFLGLSLTAPYQQTVVWLTS 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLF 104
+ I+ H LG+QV+IEDY+ KI+ ++
Sbjct: 62 PVNTVCIVAWIIAAFYHAALGLQVVIEDYVAAEGPKIISIW 102
>gi|154251887|ref|YP_001412711.1| succinate dehydrogenase hydrophobic membrane anchor [Parvibaculum
lavamentivorans DS-1]
gi|154155837|gb|ABS63054.1| Succinate dehydrogenase hydrophobic membrane anchor [Parvibaculum
lavamentivorans DS-1]
Length = 141
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L RV +GSAK GT I+QR TA+A P +FF+ + A YE S L+N
Sbjct: 17 DMRTPLARVLHLGSAKSGTQDHIRQRLTAVAIAPLSLFFLVLLVALTGADYETARSWLAN 76
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V + ++ +HM++GMQ++IEDY+ LK + + N+ F + + CL+++LK
Sbjct: 77 PLVGILALCLIVAAIIHMRIGMQIVIEDYVIAPGLKHLSILANTFFSYGVGLACLYAVLK 136
Query: 124 IA 125
+A
Sbjct: 137 LA 138
>gi|148251846|ref|YP_001236431.1| succinate dehydrogenase subunit D [Bradyrhizobium sp. BTAi1]
gi|146404019|gb|ABQ32525.1| succinate dehydrogenase subunit D [Bradyrhizobium sp. BTAi1]
Length = 124
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 71/121 (58%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ LGRVR +G+A GT F +QR TA+A I+ + I +L ++
Sbjct: 1 MRTPLGRVRNLGAAHSGTSDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+A IM L I+ HM++GMQV+IEDY+H LK++ + N+ F + + + +++L+K+
Sbjct: 61 PIALIMLLFVIASCWHMKIGMQVVIEDYVHSEPLKLVAIMANNFFAVTVALASIYALIKL 120
Query: 125 A 125
+
Sbjct: 121 S 121
>gi|197103677|ref|YP_002129054.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Phenylobacterium zucineum HLK1]
gi|196477097|gb|ACG76625.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Phenylobacterium zucineum HLK1]
Length = 139
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L R +G+GSAK G GH+I +R +A A IP ++ + I+ Y V+ +S
Sbjct: 16 RTPLSRAKGLGSAKHGVGHWIGERVSAAALIPLTLWAVYAVIRLAALDYYGAVAWISTPL 75
Query: 66 VASIMGLGTISIS-VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
++M L T++ S HM G++V++EDYIH L K L +N L +FS+LK+
Sbjct: 76 NMTLMVL-TLAFSFWHMHAGLRVVVEDYIHKTLSKAALLLLNFFVCGLAGALAVFSVLKV 134
Query: 125 AILGT 129
A+ G
Sbjct: 135 ALGGA 139
>gi|294011058|ref|YP_003544518.1| succinate dehydrogenase hydrophobic anchor subunit [Sphingobium
japonicum UT26S]
gi|292674388|dbj|BAI95906.1| succinate dehydrogenase hydrophobic anchor subunit [Sphingobium
japonicum UT26S]
Length = 129
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSA+ G H++ QR+TAI N+ +++ + I Y+ +V ++N V
Sbjct: 5 TGIGRVRGLGSARHGAHHWLAQRYTAIGNLLLVLWLLFSLIALPGLDYQSVVGWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +SI H++LGMQV++EDY+H + L + + + + + +F++ KIA
Sbjct: 65 AVPLMLMIVSIFWHLRLGMQVMLEDYVHDKGLAFLSMLLLNFYAFGGAAAGVFAIAKIAF 124
Query: 127 LG 128
G
Sbjct: 125 TG 126
>gi|307295106|ref|ZP_07574948.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingobium chlorophenolicum L-1]
gi|306879580|gb|EFN10798.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingobium chlorophenolicum L-1]
Length = 129
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSA+ G H++ QR+TAI N+ +++ + I Y+ +V ++N V
Sbjct: 5 TGIGRVRGLGSARHGAHHWLAQRYTAIGNLLLVLWLLFSLIALPGLDYQSVVGWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +SI H++LGMQV++EDY+H + L + + + + + +F++ KIA
Sbjct: 65 AVPLMLMIVSIFWHLRLGMQVMLEDYVHDKGLAFLSMLLLNFYAFGGAAAGVFAIAKIAF 124
Query: 127 LG 128
G
Sbjct: 125 TG 126
>gi|27375624|ref|NP_767153.1| succinate dehydrogenase hydrophobic membrane anchor protein subunit
[Bradyrhizobium japonicum USDA 110]
gi|3169723|gb|AAC17941.1| succinate dehydrogenase membrane anchor subunit [Bradyrhizobium
japonicum]
gi|27348761|dbj|BAC45778.1| succinate dehydrogenase hydrophobic membrane anchor protein subunit
[Bradyrhizobium japonicum USDA 110]
Length = 134
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIAN----IPFIIFFIAFFIKYGDAPYEQIVS 59
MR+ LGRVR +G+A GT F +QR T +A IP I+ + F + +
Sbjct: 10 SMRTPLGRVRNLGAAHSGTSDFWRQRITGVAMVLMMIPVIVIIVMLFGRN----QAFVAQ 65
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ ++ +A IM L + + HM++GMQV+IEDY+H LK+ + +N+ F + + + +
Sbjct: 66 TIGSLPIAIIMLLFIFASAWHMKIGMQVVIEDYVHNEKLKLTAIMLNNFFSIAVALASTY 125
Query: 120 SLLKIA 125
++LK++
Sbjct: 126 AILKLS 131
>gi|209967179|ref|YP_002300094.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Rhodospirillum centenum SW]
gi|209960645|gb|ACJ01282.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Rhodospirillum centenum SW]
Length = 132
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
D R+ LGRVRG+GSA+ G+ H+ R A AN+P +++ + I A + ++V+ L
Sbjct: 7 DAGFRTPLGRVRGLGSARSGSAHWFGYRMLAAANVPLLLWLLVSLIPLAGAGHAEVVAFL 66
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
A +M L +I H GM ++EDY+ +L+K + + LLL + F++
Sbjct: 67 QRPLNAVLMLLTIGAIFYHAAYGMMEVLEDYVQAKLVKTLAAALIKGGCLLLAVASAFAV 126
Query: 122 LKIAI 126
LKIA+
Sbjct: 127 LKIAL 131
>gi|162147200|ref|YP_001601661.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209544253|ref|YP_002276482.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161785777|emb|CAP55348.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531930|gb|ACI51867.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
Length = 140
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS L R RG+GSAK G H+ +R +A+A +P +F+ ++ + E +V
Sbjct: 12 MRSQLSRARGLGSAKTGVDHWWMERMSAVALVPLSGWFVLQVLRLAGSSQEDVVE-WGGK 70
Query: 65 AVASIMGLGTISIS-VHMQLGMQVIIEDYIHYRL-LKIMFLFMNSCFVLLLIIFCLFSLL 122
V S M L + ++ HMQLG+QVII+DY+H + L + L + F L+ +F + ++L
Sbjct: 71 PVNSSMLLALMVLTFYHMQLGLQVIIDDYVHGKAHLPVSLLMKGAAF--LIGLFAVIAVL 128
Query: 123 KIAI 126
K+A+
Sbjct: 129 KLAL 132
>gi|75676983|ref|YP_319404.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421853|gb|ABA06052.1| succinate dehydrogenase subunit D [Nitrobacter winogradskyi Nb-255]
Length = 135
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ LGRVR GSA GT F +QR T++A I I+ + + +L +
Sbjct: 11 SMRTPLGRVRNHGSAHSGTTDFWRQRLTSVAMILLIVPMVVVMMILLGRNQAGAAQILGS 70
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+A IM L ++ HM++GMQVIIEDY+H LK+ + N+ F + L + +++ K
Sbjct: 71 PPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDGKLKLASIMANNFFSVTLALTAAYAIFK 130
Query: 124 IA 125
++
Sbjct: 131 LS 132
>gi|325920387|ref|ZP_08182318.1| succinate dehydrogenase subunit D [Xanthomonas gardneri ATCC 19865]
gi|325549134|gb|EGD20057.1| succinate dehydrogenase subunit D [Xanthomonas gardneri ATCC 19865]
Length = 128
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A + I+F+ F + + Y V+ +S
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVLQRLTATALVVLSIWFLVFVLSLLGSDYPTAVAAVSRPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ +++ H Q+G+QV++EDYIH LL + L I +F++ +IA
Sbjct: 65 NAILLVGFLVAMFWHAQIGLQVVLEDYIHNSLLALALQTTVKFVAALGAIVSIFAVARIA 124
Query: 126 ILG 128
+ G
Sbjct: 125 LGG 127
>gi|85714478|ref|ZP_01045466.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
gi|85698925|gb|EAQ36794.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
Length = 135
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ LGRVR +GSA GT F +QR T++A I II + + +L +
Sbjct: 11 SMRTPLGRVRNLGSAHSGTTDFWRQRLTSVAMILLIIPMVVVMMILLGRNQAGAAQILGS 70
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCF 109
+A IM L ++ HM++GMQVIIEDY+H LK+ + N+ F
Sbjct: 71 PPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDEKLKLASIMANNFF 116
>gi|92119076|ref|YP_578805.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
hamburgensis X14]
gi|91801970|gb|ABE64345.1| succinate dehydrogenase subunit D [Nitrobacter hamburgensis X14]
Length = 133
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ L RVR +G+A GT F +QR TA+A I I+ I + +L +
Sbjct: 9 SMRTPLSRVRNLGAAHSGTKDFWRQRLTAVAMILLIVPMIVVMMILLGRNQAGAAQILGS 68
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+A IM L ++ HM++GMQVIIEDY+H K+ + N+ F + L + +++ K
Sbjct: 69 PPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDEKTKLASIMANNFFSVTLALAAAYAIFK 128
Query: 124 IA 125
++
Sbjct: 129 LS 130
>gi|241518523|ref|YP_002979151.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862936|gb|ACS60600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 127
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 70/120 (58%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
M + LGRVRG+GSAK GT ++ ++ + +A + I I + +V+ + +
Sbjct: 1 MTTPLGRVRGLGSAKGGTRPYVLKQASGLALGILTPYLIGIGIYLLGRDRDFVVASIGSF 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ + + +VHM +GM+ IIEDY+H + K++ LF+NS F L+ + C+F++L++
Sbjct: 61 WIGPALLAFILLSAVHMDIGMRTIIEDYVHGHMRKLVILFLNSAFTWLVCLLCVFAILRM 120
>gi|114571386|ref|YP_758066.1| succinate dehydrogenase subunit D [Maricaulis maris MCS10]
gi|114341848|gb|ABI67128.1| succinate dehydrogenase subunit D [Maricaulis maris MCS10]
Length = 123
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA----FFIKYGDAPYEQIVS 59
D R+ +VRG+G++ G H+I R T+IA +FF+A + + AP
Sbjct: 3 DYRTPTAKVRGLGASGHGASHWIVHRVTSIA-----LFFLAPVFVWMLAKSGAP-ASAAE 56
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
S+ A A I L + HM+LGMQVIIEDY+H K + + N+ L L + F
Sbjct: 57 FFSSPAGAIITLLTLTAGLSHMRLGMQVIIEDYVHKHGTKTLLMLANTFLTLGLWLVTAF 116
Query: 120 SLLKIAI 126
+LLK+A+
Sbjct: 117 ALLKLAL 123
>gi|21231575|ref|NP_637492.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768303|ref|YP_243065.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991442|ref|YP_001903452.1| succinate dehydrogenase (ubiquinone) membrane anchor subunit
[Xanthomonas campestris pv. campestris str. B100]
gi|21113262|gb|AAM41416.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66573635|gb|AAY49045.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167733202|emb|CAP51400.1| succinate dehydrogenase (ubiquinone) membrane anchor subunit
[Xanthomonas campestris pv. campestris]
Length = 128
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVVQRLTATALVPLSIWFLILVLSLIGADHTAASAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL + + +L I +F++ +IA
Sbjct: 65 NAILLVGFLIASFWHAQLGMQVVLEDYVHNSLLALAAQTLVRFVAVLGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|254521173|ref|ZP_05133228.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas sp. SKA14]
gi|219718764|gb|EED37289.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas sp. SKA14]
Length = 128
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 5 RTPLKSVRGLGSAKTGTEHFVHQRLTAAALVVLGIWFLVFVLSLLGSDYATAAAAVAKPW 64
Query: 66 VA-SIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++GL I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 65 NAVPLIGL-LIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AI 126
A+
Sbjct: 124 AL 125
>gi|194365314|ref|YP_002027924.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas maltophilia R551-3]
gi|194348118|gb|ACF51241.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas maltophilia R551-3]
Length = 128
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 5 RTPLKGVRGLGSAKTGTEHFVHQRLTAAALVALGIWFLVFVLGLLGSDYATAAAAVAKPW 64
Query: 66 VA-SIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++GL I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 65 NAVPLIGL-LIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AI 126
A+
Sbjct: 124 AL 125
>gi|190573777|ref|YP_001971622.1| putative succinate dehydrogenase hydrophobic membrane anchor
subunit [Stenotrophomonas maltophilia K279a]
gi|190011699|emb|CAQ45318.1| putative succinate dehydrogenase hydrophobic membrane anchor
subunit [Stenotrophomonas maltophilia K279a]
Length = 128
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 5 RTPLKNVRGLGSAKTGTEHFVHQRLTAAALVVLGIWFLVFVLGLLGSDYATAAAAVAKPW 64
Query: 66 VA-SIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++GL I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 65 NAVPLIGL-LIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AI 126
A+
Sbjct: 124 AL 125
>gi|299133111|ref|ZP_07026306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Afipia sp. 1NLS2]
gi|298593248|gb|EFI53448.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Afipia sp. 1NLS2]
Length = 135
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ L RVR +G+A GT F +QR TAIA II + +L +
Sbjct: 11 SMRTPLARVRRLGAAHAGTSDFFRQRVTAIAMALLIIPVAIIVLMLTGRDQAAAAQLLGS 70
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA ++ L ++ +HM++G+QV+IEDY+H LK++ + N+ F + + +F++LK
Sbjct: 71 PIVAILLALFIVAGCLHMKIGVQVVIEDYVHSEALKLLAIIANNFFSFAVGLASIFAILK 130
Query: 124 IA 125
++
Sbjct: 131 LS 132
>gi|258541136|ref|YP_003186569.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256632214|dbj|BAH98189.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256635271|dbj|BAI01240.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256638326|dbj|BAI04288.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256641380|dbj|BAI07335.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256644435|dbj|BAI10383.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256647490|dbj|BAI13431.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256650543|dbj|BAI16477.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653534|dbj|BAI19461.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 137
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+G+ G GH+ +R TA + +P +F+ + G A + ++V
Sbjct: 11 MRSQLGRARGLGAGHSGVGHWWAERVTAASLLPLSTWFVVQMFRLGGADHTEVVKWGGKP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYR 96
A+++ I+ H QLG+QVI++DY+H +
Sbjct: 71 VNATMLIALIITTFYHAQLGLQVIVDDYVHGK 102
>gi|85708848|ref|ZP_01039914.1| hypothetical protein NAP1_06395 [Erythrobacter sp. NAP1]
gi|85690382|gb|EAQ30385.1| hypothetical protein NAP1_06395 [Erythrobacter sp. NAP1]
Length = 128
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+G+VRG+GS+ G H++ R TAI N+ + + I F+ D Y+ + LS
Sbjct: 5 TSIGKVRGLGSSHHGAHHWLAARTTAIGNLVLMTWLILSFVLLPDFSYQSVSGWLSQPIA 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A M L IS+ H +LG+QV+IEDYIH K L + F +FS+ +A+
Sbjct: 65 AVPMILLIISVFYHARLGLQVVIEDYIHEPGSKFALLSALNLAAFGGGAFAIFSVASLAL 124
Query: 127 LGT 129
G
Sbjct: 125 TGA 127
>gi|329114747|ref|ZP_08243504.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Acetobacter pomorum DM001]
gi|326695878|gb|EGE47562.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Acetobacter pomorum DM001]
Length = 137
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+G+ G GH+ +R TA + +P +F+ + G A + ++V
Sbjct: 11 MRSQLGRARGLGAGHSGVGHWWAERVTAASLLPLSTWFVVQMFRLGGADHAEVVKWGGKP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYR 96
A+++ I+ H QLG+QVI++DY+H +
Sbjct: 71 VNATMLIALIITTFYHAQLGLQVIVDDYVHGK 102
>gi|316931810|ref|YP_004106792.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris DX-1]
gi|315599524|gb|ADU42059.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris DX-1]
Length = 137
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSV 60
MR+ +G+VR G A GT F +QR T +A I I I + A QI
Sbjct: 13 SMRTPIGKVRKFGPAGSGTSDFWRQRITGVAMTLLILPTIVVIMMLLGRNQAAAAQI--- 69
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + +A +M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F+
Sbjct: 70 LGSPLIALVMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFSIAVALAAIFA 129
Query: 121 LLKIA 125
+ K+A
Sbjct: 130 IFKMA 134
>gi|289669027|ref|ZP_06490102.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 128
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL +M + +L I +F++ +IA
Sbjct: 65 NAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALMAQTLVRFVAVLGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|15837673|ref|NP_298361.1| succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
gi|9106018|gb|AAF83881.1|AE003943_12 succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
Length = 127
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 5 RTPLKNARGLGAAKAGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++IA
Sbjct: 65 NAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALALQTMVKFIAVLGAVASVFAVVRIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|319786901|ref|YP_004146376.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudoxanthomonas suwonensis 11-1]
gi|317465413|gb|ADV27145.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudoxanthomonas suwonensis 11-1]
Length = 127
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A + ++F+ F + + Y +S
Sbjct: 5 RTPLKNVRGLGTAKTGTDHFVHQRLTATALVFLSLWFVYFVLGLVGSDYMAATDAVSKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ +++ H QLG+QV++EDY+H L+ + +L I +F++ +IA
Sbjct: 65 NAVLLVGFLVAMFWHAQLGLQVVLEDYVHNSLVALALQVSVKFIAVLGAIVSIFAVARIA 124
Query: 126 ILG 128
+ G
Sbjct: 125 LAG 127
>gi|330991157|ref|ZP_08315110.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Gluconacetobacter sp. SXCC-1]
gi|329761743|gb|EGG78234.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Gluconacetobacter sp. SXCC-1]
Length = 143
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS L R RG+GS + G GH+ +R +A+A +P +F+ + A ++ +
Sbjct: 12 MRSQLSRARGLGSGQAGVGHWWAERASAVALVPLSGWFVIQVFRLAGASQPEVAKWGARP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
++M I H QLG+QVII+DY+H + L M V LL +F S+LK+
Sbjct: 72 FNTTMMLSLVILTFYHTQLGLQVIIDDYVHGKAHLPAGLLMKG-IVFLLGLFGTVSVLKL 130
Query: 125 AILGT 129
A+ G+
Sbjct: 131 ALAGS 135
>gi|114799518|ref|YP_761917.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomonas neptunium ATCC 15444]
gi|114739692|gb|ABI77817.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomonas neptunium ATCC 15444]
Length = 129
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIAN---IPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASI 69
RG+GSAK GT H I+ R TAIA +P+ ++ + IK A YE ++ + A++
Sbjct: 14 RGLGSAKSGTQHHIRLRVTAIALAFLVPWCLYAV---IKASGAGYEGALAWVGQPINATL 70
Query: 70 MGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNS 107
+ L ++S HM+LGMQVIIEDYI + L +N+
Sbjct: 71 LILTAAAVSYHMRLGMQVIIEDYIAKTATRTTLLILNT 108
>gi|149184715|ref|ZP_01863033.1| succinate dehydrogenase, cytochrome b subunit [Erythrobacter sp.
SD-21]
gi|148832035|gb|EDL50468.1| succinate dehydrogenase, cytochrome b subunit [Erythrobacter sp.
SD-21]
Length = 128
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFF---IAFFIKYGDAPYEQIVSVLSN 63
+ +GRVRG+GSA +G H+++QRFTAI N+ ++F IA Y Y + S
Sbjct: 5 TPIGRVRGLGSAHEGPHHWLQQRFTAIGNLVLVLFLAVSIALLPSY---DYTTMSGWASQ 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A+ + L I+ H ++G+QV+IEDY+H K + + + + +F L S+ +
Sbjct: 62 TLPATALALICINTFWHARIGLQVLIEDYVHTPGNKFACIALLNLAAIGGAVFGLVSIAR 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFGG 126
>gi|285018595|ref|YP_003376306.1| succinate dehydrogenase membrane anchor subunit protein
[Xanthomonas albilineans GPE PC73]
gi|283473813|emb|CBA16315.1| putative succinate dehydrogenase membrane anchor subunit protein
[Xanthomonas albilineans]
Length = 128
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A + I+F+ + A Y ++
Sbjct: 5 RTPLKNVRGLGAAKSGTEHFVLQRLTATALVGLTIWFLTLVLSLLGADYVTATQAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I++ H Q+G+QVI+EDY+H LL + +L I +F++ +IA
Sbjct: 65 NAVLLVGFLIAMFWHAQIGLQVILEDYVHNSLLALALQTTVKFIAVLGAIVGVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|28198268|ref|NP_778582.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa Temecula1]
gi|182680905|ref|YP_001829065.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xylella fastidiosa M23]
gi|28056338|gb|AAO28231.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa Temecula1]
gi|182631015|gb|ACB91791.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xylella fastidiosa M23]
gi|307579373|gb|ADN63342.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 127
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 5 RTPLKNARGLGAAKVGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++IA
Sbjct: 65 NAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALTLQTMVRFIAVLGAVASVFAVVRIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|71275602|ref|ZP_00651887.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Dixon]
gi|71899419|ref|ZP_00681578.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|71899499|ref|ZP_00681656.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|170729590|ref|YP_001775023.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa M12]
gi|71163493|gb|EAO13210.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Dixon]
gi|71730719|gb|EAO32793.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|71730828|gb|EAO32900.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|167964383|gb|ACA11393.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa M12]
Length = 127
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 5 RTPLKNARGLGAAKVGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++IA
Sbjct: 65 NAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALALQTMVRFIAVLGAVASVFAVVRIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|86747452|ref|YP_483948.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris HaA2]
gi|86570480|gb|ABD05037.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris HaA2]
Length = 140
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIAN----IPFIIFFIAFFIKYGDAPYEQI 57
+ MR+ +G+VR +G A GT F +QR T +A +P I+ I + A QI
Sbjct: 14 ERTMRTPMGKVRKLGPAGSGTSDFWQQRITGVAMTLLILPVIVV-IMMLLGRNQAGAAQI 72
Query: 58 VSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
L + ++ M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + +
Sbjct: 73 ---LGSPLISLTMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFSIAVALAA 129
Query: 118 LFSLLKIA 125
+F++ K+A
Sbjct: 130 IFAIFKLA 137
>gi|87199762|ref|YP_497019.1| succinate dehydrogenase subunit D [Novosphingobium aromaticivorans
DSM 12444]
gi|87135443|gb|ABD26185.1| succinate dehydrogenase subunit D [Novosphingobium aromaticivorans
DSM 12444]
Length = 127
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+GRVRG+GS+ +GT H++ R TA+ N+ I F + D Y + ++
Sbjct: 5 TSIGRVRGLGSSHEGTHHWLTARLTAVGNLVLITFLVVSLALLPDYSYATVRGWVARPVP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + L I+ H ++G+QV++EDY+H KI + + + F + S+L+IA+
Sbjct: 65 SIALILIMINTFTHARMGVQVMLEDYVHEEGGKIAAWLLVNIVPFVAAAFGILSVLRIAL 124
Query: 127 LG 128
G
Sbjct: 125 GG 126
>gi|153868749|ref|ZP_01998496.1| succinate dehydrogenase membrane anchor subunit [Beggiatoa sp. PS]
gi|152074660|gb|EDN71494.1| succinate dehydrogenase membrane anchor subunit [Beggiatoa sp. PS]
Length = 128
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA----FFIKYGDAPYEQIVSVL 61
++ L +VR GSA++GT HFI QR +AIA +P +++F+A F +K A + + +
Sbjct: 5 QTPLSQVRLWGSAREGTSHFIAQRLSAIALVPLLLWFVAAIIFFIVKADHASLVEWIRLY 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
N + ++ L T H G+Q I+ DY+H ++K + + + FV+ + + + ++
Sbjct: 65 WNTELLILLILLTFH---HAHAGLQEILVDYVHNEIIKAIVMTLMKFFVIGITVASVLAV 121
Query: 122 LKIAILG 128
L+IA+ G
Sbjct: 122 LRIALGG 128
>gi|53804138|ref|YP_114004.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylococcus capsulatus str. Bath]
gi|53757899|gb|AAU92190.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Methylococcus capsulatus str. Bath]
Length = 126
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+ R+ L R RG+GSA++G + +QR TA+A +P ++F A + ++V+ + N
Sbjct: 3 NYRTPLARARGLGSAREGLHDWWRQRVTAVALVPLGLWFAFSVALLPSASHAELVAWI-N 61
Query: 64 VAVASIMGLGTISIS-VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
V +++ L I I+ H LG+QV+IEDY+H LK++ + V L + ++++L
Sbjct: 62 VPWNTLLLLSFILIAFYHTMLGLQVVIEDYVHLDWLKLVGILGVKLVVSFLTLAAVYAIL 121
Query: 123 KI 124
+I
Sbjct: 122 RI 123
>gi|289665884|ref|ZP_06487465.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 128
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I H QLGMQV++EDY+H LL +M + +L I +F++ +IA
Sbjct: 65 NAILLVAFLIVSFWHAQLGMQVVLEDYVHDSLLALMAQTLVRFVAVLGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|39933295|ref|NP_945571.1| succinate dehydrogenase cytochrome b subunit [Rhodopseudomonas
palustris CGA009]
gi|192288648|ref|YP_001989253.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris TIE-1]
gi|39652920|emb|CAE25662.1| succinate dehydrogenase cytochrome b small subunit
[Rhodopseudomonas palustris CGA009]
gi|192282397|gb|ACE98777.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris TIE-1]
Length = 137
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIAN----IPFIIFFIAFFIKYGDAPYEQIVS 59
MR+ +G+VR G A GT F +QR T +A +P I+ I + A QI
Sbjct: 13 SMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVV-IMMLLGRNQAAAAQI-- 69
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + ++ IM L I+ ++HM++GMQV+IEDY+ LK++ + N+ F + + + +F
Sbjct: 70 -LGSPLISLIMILFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIF 128
Query: 120 SLLKIA 125
++ K+A
Sbjct: 129 AIFKMA 134
>gi|254448797|ref|ZP_05062254.1| succinate dehydrogenase, hydrophobic membrane anchor protein [gamma
proteobacterium HTCC5015]
gi|198261638|gb|EDY85926.1| succinate dehydrogenase, hydrophobic membrane anchor protein [gamma
proteobacterium HTCC5015]
Length = 120
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 9 LGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVAS 68
+ + G+GSAKDGT HF+ QR T IA +P +++ G A + ++N A+
Sbjct: 1 MSKAYGLGSAKDGTHHFMIQRLTGIALVPLMLWLTFSIACLGGADLASVRDFIANPLNAT 60
Query: 69 IMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
++ T+S+ H LGMQV++EDY+ L++ V +LI F F+L ++IL
Sbjct: 61 LLICLTVSVFYHSSLGMQVVLEDYLRPHWLRLT--------VQILINFANFALAVVSILA 112
Query: 129 TL 130
L
Sbjct: 113 IL 114
>gi|21242815|ref|NP_642397.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|21108301|gb|AAM36933.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|50981402|gb|AAT91479.1| succinate dehydrogenase subunit D [Xanthomonas citri]
Length = 128
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLVFVLSLIGADHAAASAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL ++ + +L I +F++ +IA
Sbjct: 65 NAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|288957015|ref|YP_003447356.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azospirillum sp. B510]
gi|288909323|dbj|BAI70812.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azospirillum sp. B510]
Length = 131
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+RS L RG+GSAK GT H+ QR TAIA +P ++F+ I + A + V+ + +
Sbjct: 8 LRSPLQVARGLGSAKHGTEHWWSQRLTAIALVPLTVWFVFGVIGHLGADHAAFVAWMKSP 67
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKI 100
A +M L + H Q G+QV+IEDY++ K+
Sbjct: 68 FSAVMMVLTAVVTFHHAQSGLQVVIEDYVNVEWQKM 103
>gi|296532572|ref|ZP_06895278.1| succinate dehydrogenase membrane anchor subunit [Roseomonas
cervicalis ATCC 49957]
gi|296267097|gb|EFH13016.1| succinate dehydrogenase membrane anchor subunit [Roseomonas
cervicalis ATCC 49957]
Length = 132
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ S+LGRVRG+GSAK GT H+ QR +++A +P ++F+ +E ++ +
Sbjct: 8 SLRLESALGRVRGLGSAKQGTHHWWMQRVSSMALLPLTLWFVISVATLAGKSHEATIAWI 67
Query: 62 SNVAVASIMGLGTISIS-VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
++ + +++ L +I +S H G+QV+IEDY+ ++ + L + +
Sbjct: 68 AH-PLNAVLLLASIGLSFQHAASGLQVVIEDYVRGEFARMFSVLAVKAACWLFGLLSAIA 126
Query: 121 LLKIAI 126
+LKIA+
Sbjct: 127 VLKIAL 132
>gi|182679665|ref|YP_001833811.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182635548|gb|ACB96322.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 130
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR++ RVR +G+A+ GT R T++A +P I F+ + Y+ +V+ L +
Sbjct: 7 SMRTAASRVRFLGAARSGTAETWHMRATSVALLPLSIAFVWIVLSLLGKNYQDVVATLGS 66
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A ++ L ++ HM++GMQ II+DY+H K L N F + + C++++LK
Sbjct: 67 PLPALLILLFVLASVYHMKIGMQSIIDDYVHEPHFKDWALLGNLFFSFCIGLACIYAVLK 126
Query: 124 IAIL 127
++ L
Sbjct: 127 LSFL 130
>gi|294624874|ref|ZP_06703531.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665037|ref|ZP_06730344.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600833|gb|EFF44913.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605194|gb|EFF48538.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 128
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK-----------YGDAPY 54
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + P+
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLIGADHAAASAAVAKPW 64
Query: 55 EQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
I +L VAS H QLGMQV++EDY+H LL ++ + +L
Sbjct: 65 NAI--LLVAFLVASFW---------HAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGA 113
Query: 115 IFCLFSLLKIAI 126
I +F++ +IA+
Sbjct: 114 IVSVFAVARIAL 125
>gi|78047798|ref|YP_363973.1| putative succinate dehydrogenase membrane anchor subunit
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325928376|ref|ZP_08189571.1| succinate dehydrogenase subunit D [Xanthomonas perforans 91-118]
gi|78036228|emb|CAJ23919.1| putative succinate dehydrogenase membrane anchor subunit
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325541252|gb|EGD12799.1| succinate dehydrogenase subunit D [Xanthomonas perforans 91-118]
Length = 128
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLIGADHAAATAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL ++ + +L I +F++ +IA
Sbjct: 65 NAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|170746892|ref|YP_001753152.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium radiotolerans JCM 2831]
gi|170653414|gb|ACB22469.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium radiotolerans JCM 2831]
Length = 139
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+R+ RVRG+G + G H+ QR TA+AN+ ++ F+ K Y + +++
Sbjct: 13 SIRTPRARVRGLGVSHHGADHWWLQRLTAVANVVLMLSFVVIIAKMAGRGYAEARLLVAT 72
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLF 104
V+ ++ L +S++VHM+LGMQVIIEDY+H KI +F
Sbjct: 73 PLVSILLILALLSVTVHMRLGMQVIIEDYVHAPSTKIAAVF 113
>gi|325917572|ref|ZP_08179772.1| succinate dehydrogenase subunit D [Xanthomonas vesicatoria ATCC
35937]
gi|325536206|gb|EGD08002.1| succinate dehydrogenase subunit D [Xanthomonas vesicatoria ATCC
35937]
Length = 128
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK-----------YGDAPY 54
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + P+
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVVQRLTATALVPLSIWFLIFVLSLIGADHAAASAAVAKPW 64
Query: 55 EQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
I +L +AS H QLGMQV++EDY+H LL + + +L
Sbjct: 65 NAI--LLVGFLIASFW---------HAQLGMQVVLEDYVHNSLLALAAQTIVRFVAVLGA 113
Query: 115 IFCLFSLLKIAI 126
I +F++ +IA+
Sbjct: 114 IVSVFAVARIAL 125
>gi|332285735|ref|YP_004417646.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Pusillimonas sp. T7-7]
gi|330429688|gb|AEC21022.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Pusillimonas sp. T7-7]
Length = 137
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+R+ L R +GS+K G H+ QR TAIA IP I+ + F A Y +++ ++
Sbjct: 9 SLRTPLKVARRLGSSKSGVHHWWLQRLTAIALIPLSIWLLYFMGALMHASYPTVLAAIAQ 68
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A + + ++ + H LG+QVIIEDY+H R L++ +L + C+ ++L
Sbjct: 69 PVHAIFLIVLSLCLFWHGALGLQVIIEDYVHTRWLEVALQIALRFGAILATLACVLAVLA 128
Query: 124 I 124
I
Sbjct: 129 I 129
>gi|88812337|ref|ZP_01127587.1| succinate dehydrogenase membrane anchor subunit [Nitrococcus
mobilis Nb-231]
gi|88790344|gb|EAR21461.1| succinate dehydrogenase membrane anchor subunit [Nitrococcus
mobilis Nb-231]
Length = 126
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 70/123 (56%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L + G+G++ GT + QR +++A +P +I+ I +++G A Y + LS+
Sbjct: 4 RTPLKQALGLGASHSGTSRWWAQRVSSVALVPLLIWLIIGIVRHGGADYTDAQAWLSSPI 63
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A + L ++ H LGMQVI+EDY+ + +++ + + ++L + +F++L +A
Sbjct: 64 TAVLTILTLVASFYHGALGMQVIVEDYVSHETVQLALVVLVKFAAMVLAVAGIFAVLLVA 123
Query: 126 ILG 128
+ G
Sbjct: 124 LGG 126
>gi|58581932|ref|YP_200948.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84623844|ref|YP_451216.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188576492|ref|YP_001913421.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xanthomonas oryzae pv. oryzae PXO99A]
gi|50313516|gb|AAT74620.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae]
gi|58426526|gb|AAW75563.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84367784|dbj|BAE68942.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188520944|gb|ACD58889.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xanthomonas oryzae pv. oryzae PXO99A]
Length = 128
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVMQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL + + ++ I +F++ +IA
Sbjct: 65 NAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALTAQTLVRFVAVVGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|83592539|ref|YP_426291.1| succinate dehydrogenase subunit D [Rhodospirillum rubrum ATCC
11170]
gi|83575453|gb|ABC22004.1| succinate dehydrogenase subunit D [Rhodospirillum rubrum ATCC
11170]
Length = 128
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 4 DMRSSLGRVRGMGSAKDGTG-HFIKQRFTAIANIPFIIFFI-AFFIKYGDAPYEQIVSVL 61
+RS LGR RG+GSAK G H++ +R AIA +P ++F+ I A Y QI + +
Sbjct: 2 SLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFM 61
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ A++M L H LG+ VIIEDY+ +K +F + L + S+
Sbjct: 62 AVPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSI 121
Query: 122 LKI 124
LK+
Sbjct: 122 LKL 124
>gi|166712287|ref|ZP_02243494.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 128
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 5 RTPLKNVRGLGAAKTGTEHFVMQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKPW 64
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ I+ H QLGMQV++EDY+H LL + + ++ I +F++ +IA
Sbjct: 65 NAILLVAFLIASFWHAQLGMQVVLEDYVHDPLLALTAQTLVRFVAVVGAIVSVFAVARIA 124
Query: 126 I 126
+
Sbjct: 125 L 125
>gi|114707254|ref|ZP_01440152.1| succinate dehydrogenase subunit D, membrane anchor protein
[Fulvimarina pelagi HTCC2506]
gi|114537450|gb|EAU40576.1| succinate dehydrogenase subunit D, membrane anchor protein
[Fulvimarina pelagi HTCC2506]
Length = 113
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
MG++ GT HF +QR TAIAN+ F+ + A ++ N + ++ L
Sbjct: 1 MGASSGGTEHFWQQRLTAIANLVLFTTFLIIVLTLIGADITEVRETFGNPIIGTLAALMI 60
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
+S VHM+LGMQ I+EDY+H +K N+ F L+ L++++K++
Sbjct: 61 VSACVHMRLGMQTILEDYVHGP-MKWPLAIANTFFACLIAALGLYAIVKMS 110
>gi|115522539|ref|YP_779450.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisA53]
gi|115516486|gb|ABJ04470.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisA53]
Length = 137
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ LG+VR +G A+ GT F +QR T +A I+ I + +L +
Sbjct: 14 MRTPLGKVRKLGPARSGTSDFWQQRITGVAMTLLILPVIIIIMMLLGRNQAGAAQILGSP 73
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+A M L ++ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F+++K+
Sbjct: 74 LIALTMILFIVASAIHMKIGMQVVIEDYIQNEKLKLVTIMANNFFSIAVALAPIFAIIKL 133
Query: 125 A 125
+
Sbjct: 134 S 134
>gi|209883445|ref|YP_002287302.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Oligotropha carboxidovorans OM5]
gi|209871641|gb|ACI91437.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Oligotropha carboxidovorans OM5]
Length = 134
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIAN----IPFIIFFIAFFIKYGDAPYEQI 57
+ MR+ L VR +G+A GT F +QR TA+A IP + I + D Q
Sbjct: 8 NVSMRTPLANVRRLGAAHGGTSDFFRQRLTAVAMALLMIPVAVIVIMLVGR--DQASAQ- 64
Query: 58 VSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
++L + VA ++ L I+ VHM++G+QV+IEDY+H KI + N+ F + +
Sbjct: 65 -ALLGSPVVAILLTLFIIAGCVHMKIGVQVVIEDYVHSEAAKISAILANNFFSFAVGLAS 123
Query: 118 LFSLLKIAI 126
++++ K+++
Sbjct: 124 IYAIFKLSV 132
>gi|91974960|ref|YP_567619.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB5]
gi|91681416|gb|ABE37718.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisB5]
Length = 140
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ +G+VR +G A GT F +QR T +A + + + +L +
Sbjct: 16 SMRTPMGKVRKLGPAGSGTSDFWQQRITGVAMTLLTLPVVVVVMMLLGRNQAGAAQILGS 75
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F++ K
Sbjct: 76 PLISLTMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFTIAVALAAIFAIFK 135
Query: 124 IA 125
+A
Sbjct: 136 LA 137
>gi|90421599|ref|YP_529969.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB18]
gi|90103613|gb|ABD85650.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisB18]
Length = 140
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIAN----IPFIIFFIAFFIKYGDAPYEQIVS 59
+R+ LG+VR G A GT F +QR T +A +P ++ I + A QI+
Sbjct: 16 SLRTPLGKVRKFGPAGSGTSDFWQQRITGVAMTLLILPVVVV-IMMLLGRNQAGAAQIIG 74
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ +A + L IS +VHM++GMQV+IEDY+ LK++ + N+ F + + + +F
Sbjct: 75 ---SPLIALTLILFIISSAVHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIF 131
Query: 120 SLLKIA 125
++ K++
Sbjct: 132 AIFKLS 137
>gi|296285023|ref|ZP_06863021.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citromicrobium bathyomarinum JL354]
Length = 128
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+GRVRG+GSA +G H++ QRFTAI N+ ++F + F+ Y + LS+
Sbjct: 5 TSIGRVRGLGSAHEGAHHWLLQRFTAIGNLVLVLFLLVSFLLLPAYDYGTVTGWLSSPIA 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A+ + L +S H +LG+QV+IEDYIH + + + + + +F +F + IA
Sbjct: 65 AAALILLIVSTFWHARLGLQVLIEDYIHQGGSRFALIALLNLVAVAGAVFGIFCIASIAF 124
Query: 127 LGT 129
G
Sbjct: 125 AGA 127
>gi|16127758|ref|NP_422322.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter crescentus CB15]
gi|13425260|gb|AAK25490.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Caulobacter crescentus CB15]
Length = 139
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L R RGMG+++ G HFI +R + +A P ++ +K AP++ +V ++
Sbjct: 13 RTPLSRARGMGASRHGVSHFITERVSGLALAPLTVWGAYAALKQVRAPHDVVVQWMAQPV 72
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ L I+ VH+Q +QV+IEDYI K + N +L +FS+LK+A
Sbjct: 73 NAVLLSLLLIAALVHLQSAVQVVIEDYIERFTTKTALVIGNLFVCVLAGAVGVFSILKVA 132
Query: 126 I 126
+
Sbjct: 133 L 133
>gi|144898838|emb|CAM75702.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Magnetospirillum gryphiswaldense MSR-1]
Length = 127
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+RS +GR RG+GSAK G GH +A+ IP ++F+ + A + + ++
Sbjct: 3 TLRSPIGRARGLGSAKSGMGHHWSTIVSAVGLIPLSLWFVVSIARLAGADHAVFTAWIAK 62
Query: 64 VAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A+++ L TI ++ H LG+ ++IEDY+ + K L LL + S+L
Sbjct: 63 GPNAALLIL-TIGLTCYHASLGLSMVIEDYVTCKAKKFAALLATRLIAALLAVGMSVSIL 121
Query: 123 KIAILG 128
K+AI G
Sbjct: 122 KVAIGG 127
>gi|241518580|ref|YP_002979208.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862993|gb|ACS60657.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 127
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIA---NIPFIIFFIAFFIKYGDAPYEQIVSVL 61
M + LGRVRG+GSA GT ++ ++ + IA P+I+ + +G ++SV
Sbjct: 1 MTTPLGRVRGLGSAHGGTKAYVLKQASGIAIGVLTPYIVGLGIYL--FGRDRDFLVLSVG 58
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S ++ +S ++HM++GM+ IIEDY+H + K+ LF+NS F + + C+F++
Sbjct: 59 SFWVGPPLLAFVILS-AIHMEIGMRTIIEDYVHGHMRKLALLFLNSAFTWSVCLLCVFAI 117
Query: 122 L 122
+
Sbjct: 118 V 118
>gi|221236579|ref|YP_002519016.1| succinate dehydrogenase membrane anchor subunit [Caulobacter
crescentus NA1000]
gi|220965752|gb|ACL97108.1| succinate dehydrogenase membrane anchor subunit [Caulobacter
crescentus NA1000]
Length = 151
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L R RGMG+++ G HFI +R + +A P ++ +K AP++ +V ++
Sbjct: 25 RTPLSRARGMGASRHGVSHFITERVSGLALAPLTVWGAYAALKQVRAPHDVVVQWMAQPV 84
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A ++ L I+ VH+Q +QV+IEDYI K + N +L +FS+LK+A
Sbjct: 85 NAVLLSLLLIAALVHLQSAVQVVIEDYIERFTTKTALVIGNLFVCVLAGAVGVFSILKVA 144
Query: 126 I 126
+
Sbjct: 145 L 145
>gi|114769285|ref|ZP_01446911.1| probable succinate dehydrogenase membrane anchor subunit protein
[alpha proteobacterium HTCC2255]
gi|114550202|gb|EAU53083.1| probable succinate dehydrogenase membrane anchor subunit protein
[alpha proteobacterium HTCC2255]
Length = 126
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ +V G+GSAK G H+ +R ++A IP I F++ + ++S N
Sbjct: 4 RTDRAKVLGLGSAKSGADHWFGERLKSVALIPLTIIFVSIVAPLIGKDHTTVISSFQNPF 63
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
V+ + L + H++ G+QV+IEDY+H + ++ + N F + +F++LKI
Sbjct: 64 VSISLILFFLVSFKHLEEGLQVVIEDYVHSKGSLLLLIIFNKLFCWTFGLAAVFAILKIT 123
Query: 126 ILG 128
G
Sbjct: 124 FAG 126
>gi|121996855|ref|YP_001001642.1| succinate dehydrogenase, cytochrome b subunit [Halorhodospira
halophila SL1]
gi|121588260|gb|ABM60840.1| succinate dehydrogenase subunit D [Halorhodospira halophila SL1]
Length = 127
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFF-IAFFIKYGDAPYEQIVSVLSNV 64
+++ R RG+GSAK+G H+ QR TA+ +P +++ I ++ G A +E + ++N
Sbjct: 5 ETAVSRARGLGSAKNGFHHWWHQRLTALVLVPLMMWLGIGLALQAG-ADFEAARAWVANP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLK 99
A+++ I + H LG+QV+IEDY+H LK
Sbjct: 64 FNATLLIAAIIMLFYHGALGVQVVIEDYVHLEGLK 98
>gi|46203231|ref|ZP_00051839.2| COG2142: Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 131
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++S
Sbjct: 12 LSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALVS 71
Query: 63 NVAVASIMGLGTISISVHMQLGMQ 86
+ VA I+ L +S++ HM++GMQ
Sbjct: 72 HPLVAIILILAVVSVATHMRIGMQ 95
>gi|84684218|ref|ZP_01012120.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84667971|gb|EAQ14439.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2654]
Length = 125
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIA---NIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
++ RV G+GSAK GTGHF +QR +AIA +P +F A+ GD YE + + +
Sbjct: 4 QTDRARVEGLGSAKQGTGHFWEQRISAIALLFLVPLFVFPFAY--NLGDG-YEAVRAAYA 60
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYR 96
+ A I ++ +H+ G+QV++EDY+H R
Sbjct: 61 HPVNAIIAIAFFLTAFLHLFQGVQVVVEDYVHGR 94
>gi|217979668|ref|YP_002363815.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocella silvestris BL2]
gi|217505044|gb|ACK52453.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocella silvestris BL2]
Length = 129
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 1 MDFDMRSSLGRVRG--MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIV 58
M D SS VR +GSAK G T++A +P I F+ + Y +
Sbjct: 1 MAHDKSSSRSPVRKGFLGSAKSGASDAWSMHVTSVALLPLAIGFVWVMLSLMHKDYAGVK 60
Query: 59 SVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ L + A ++ L ++ HM+LGMQ II+DYIH K L N CF + + +
Sbjct: 61 AELGHPLPAIVLLLFILAGCWHMKLGMQSIIDDYIHAPHAKEWALVGNFCFSAAIALASV 120
Query: 119 FSLLKIAI 126
F+++K+ +
Sbjct: 121 FAVVKLGL 128
>gi|326387616|ref|ZP_08209222.1| succinate dehydrogenase subunit D [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207662|gb|EGD58473.1| succinate dehydrogenase subunit D [Novosphingobium nitrogenifigens
DSM 19370]
Length = 118
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
RG+GS+ G H++ R TA+ N+ I + I D + + S L+ A+ + L
Sbjct: 2 RGLGSSHQGAHHWLLTRLTAVGNLILIPYLIVSLALLPDFEWATVHSWLAKPVPATALIL 61
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
I+ H +LG+QV++EDY+H KI + + F + S+++IA+
Sbjct: 62 TFINTFYHARLGIQVMLEDYVHEEAGKIAAWLLVNIVPFAAGAFGVVSVIRIAL 115
>gi|84515884|ref|ZP_01003245.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Loktanella vestfoldensis SKA53]
gi|84510326|gb|EAQ06782.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Loktanella vestfoldensis SKA53]
Length = 123
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT H + T++A + I F+ F APY ++++ A +
Sbjct: 9 RAVGMGSAKSGTHHHWQMMVTSVALLVLIPLFVFTFGTILGAPYAEVIAYYQRPFPAVVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L + H +LG+Q +IEDY+H K +FM C F +F++++IA+
Sbjct: 69 ILTMLVGFFHFRLGVQTVIEDYVHGFARKAAIIFMI-CLSYAAAGFAVFAIIRIAL 123
>gi|83943850|ref|ZP_00956307.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. EE-36]
gi|83845097|gb|EAP82977.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. EE-36]
Length = 123
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT HF + +++A + I F+ F YE+I++ S A +
Sbjct: 9 RAMGMGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGAALGGTYEEIIAYYSRPFPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L I H G+QV+IEDY+H K+ + M +C +F++ +IA+
Sbjct: 69 ALTLIVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAVGVFAIARIAL 123
>gi|119385744|ref|YP_916799.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus
denitrificans PD1222]
gi|119376339|gb|ABL71103.1| succinate dehydrogenase subunit D [Paracoccus denitrificans PD1222]
Length = 127
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R RG+G+A GTG + QR +A +P +++F A + ++V+ L+ + +M
Sbjct: 11 RARGLGAAGHGTGRWWAQRVSAAGLVPLVLWFALALAGGAAADHAKLVAWLAAPLNSGLM 70
Query: 71 GLGTISISVHMQLGMQVIIEDYIH--YRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
L ++ H LG+QV+ EDYIH R + + + +CF ++F + S+L+IA
Sbjct: 71 ILLLMAGFHHAALGLQVLAEDYIHSGARFVAAAAIQL-ACFA--GVVFGIASVLRIA 124
>gi|304320538|ref|YP_003854181.1| hypothetical protein PB2503_04822 [Parvularcula bermudensis
HTCC2503]
gi|303299440|gb|ADM09039.1| hypothetical protein PB2503_04822 [Parvularcula bermudensis
HTCC2503]
Length = 112
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
+ T H+I QRFTA+ IP +I+ + I + +Q LS AS+M + +S+
Sbjct: 2 SSKPTKHYIAQRFTALIQIPLVIWLVFGVIGHAGDTQDQFRVWLSEPLTASLMIIFILSV 61
Query: 78 SVHMQLGMQVIIEDYIH 94
HM LGM +++DYIH
Sbjct: 62 FFHMHLGMGEVVDDYIH 78
>gi|83953491|ref|ZP_00962213.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. NAS-14.1]
gi|83842459|gb|EAP81627.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. NAS-14.1]
Length = 123
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT HF + +++A + I F+ F YE+I++ S A +
Sbjct: 9 RAMGLGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGSALGGTYEEIIAYYSRPFPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L I H G+QV+IEDY+H K+ + M +C +F++ +IA+
Sbjct: 69 ALTLIVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAVGVFAIARIAL 123
>gi|91205982|ref|YP_538337.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii RML369-C]
gi|157826654|ref|YP_001495718.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii OSU 85-389]
gi|122425295|sp|Q1RHB6|DHSD_RICBR RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|91069526|gb|ABE05248.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii RML369-C]
gi|157801958|gb|ABV78681.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii OSU 85-389]
Length = 125
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D R+ + + + GSAK G+ H++ QR TAI + ++ + F + ++ I+
Sbjct: 1 MTYDFRAEIVKAKNTGSAKSGSHHWLLQRITAIILVLCSLWLLYFTLANKNSDVNIIIWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
L + + I+ H LGMQV+IEDYI L+ + F +L I+
Sbjct: 61 LKRPINLIPLLIAVITSLYHAMLGMQVVIEDYISCNKLRNTLIIAVKLFSILTIV 115
>gi|6649875|gb|AAF21610.1|AF018287_4 SdhD [papaya bunchy top disease rickettsia]
Length = 125
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D R+ + + + GSAK G+ H++ QR TAI ++ I F + ++ I+
Sbjct: 1 MTYDFRAEILKAKNTGSAKSGSHHWLLQRITAIILALCSVWLIYFTLANKNSDVNIIIWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + I+ H LGMQV+IEDYI L+ N+ L+I+ LFS
Sbjct: 61 LKRPINLVPLLIAVITSLYHAMLGMQVVIEDYIGCNKLR------NT----LVIVVKLFS 110
Query: 121 LLKI 124
+L I
Sbjct: 111 ILTI 114
>gi|126734840|ref|ZP_01750586.1| succinate dehydrogenase [Roseobacter sp. CCS2]
gi|126715395|gb|EBA12260.1| succinate dehydrogenase [Roseobacter sp. CCS2]
Length = 123
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT H + T++A + I FI F APYE++++ A +
Sbjct: 9 RASGMGSAKTGTEHHWQMMVTSVALLILIPMFIFTFGWILGAPYEEVIAYYQRPFPAVVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIH 94
L + H +LG+Q +IEDY+H
Sbjct: 69 ILTLLVGFFHYRLGVQTLIEDYVH 92
>gi|3273340|dbj|BAA31211.1| succinate dehydrogenase cytochrome b small subunit [Rhodospirillum
rubrum]
Length = 127
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFI-AFFIKYGDAPYEQIVSVLS 62
+RS LGR R H++ +R AIA +P ++F+ I A Y QI + ++
Sbjct: 2 SLRSPLGRARRGFRQGGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFMA 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A++M L H LG+ VIIEDY+ +K +F + L + S+L
Sbjct: 62 VPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSIL 121
Query: 123 KIAILG 128
K+ G
Sbjct: 122 KLTFGG 127
>gi|167648794|ref|YP_001686457.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter sp. K31]
gi|167351224|gb|ABZ73959.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter sp. K31]
Length = 135
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ + R RG+G+++ G HFI +R + +A IP ++ + ++ ++ ++
Sbjct: 11 RTPMSRARGLGASRHGVAHFITERVSGVALIPLALWGLFAALRLASLGFDGAAEWVAIPC 70
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A+++ L + +H++ +QV+IEDYI LK + + N +L + + ++LK+A
Sbjct: 71 NAALLCLLLVVALIHLKGAVQVVIEDYIADFTLKTVLVLANLFVCVLGGVLGVVAILKVA 130
Query: 126 ILGT 129
G
Sbjct: 131 FTGA 134
>gi|254486788|ref|ZP_05099993.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. GAI101]
gi|214043657|gb|EEB84295.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. GAI101]
Length = 123
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT HF + +++A + I F+ F YE+I++ + A I
Sbjct: 9 RAVGMGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGAALGGTYEEILAYYAKPFPALIA 68
Query: 71 GLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L TI++ H G+QV+IEDY+H K+ + M +C +F+++++A+
Sbjct: 69 AL-TIAVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAAGVFAIIRLAL 123
>gi|326404268|ref|YP_004284350.1| succinate dehydrogenase membrane anchor subunit [Acidiphilium
multivorum AIU301]
gi|325051130|dbj|BAJ81468.1| succinate dehydrogenase membrane anchor subunit [Acidiphilium
multivorum AIU301]
Length = 122
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS+LGR RGMG+AK G H+ QR TA+A +P ++ + + A +++ ++
Sbjct: 1 MRSALGRARGMGAAKSGVHHWWAQRLTALALLPLALYAVLSVLLLEGASQAEMLRYMAEP 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIH---YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ I++ H+QLG+QV+IEDYI RL ++ + + F LL I + L
Sbjct: 61 WNGVLFLALVIALFYHLQLGLQVVIEDYIRSEGKRLAVMLAMRATAGFFGLLAIISVLKL 120
>gi|148260874|ref|YP_001235001.1| succinate dehydrogenase, cytochrome b subunit [Acidiphilium cryptum
JF-5]
gi|146402555|gb|ABQ31082.1| succinate dehydrogenase subunit D [Acidiphilium cryptum JF-5]
Length = 125
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS+LGR RGMG+AK G H+ QR TA+A +P ++ + + A +++ ++
Sbjct: 4 MRSALGRARGMGAAKSGVHHWWAQRLTALALLPLALYAVLSVLLLEGASQAEMLRYMAEP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIH---YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ I++ H+QLG+QV+IEDYI RL ++ + + F LL I + L
Sbjct: 64 WNGVLFLALVIALFYHLQLGLQVVIEDYIRSEGKRLAVMLAMRATAGFFGLLAIISVLKL 123
>gi|295687607|ref|YP_003591300.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Caulobacter segnis ATCC 21756]
gi|295429510|gb|ADG08682.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter segnis ATCC 21756]
Length = 139
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ L R RG+GS+ G HFI +R + +A P ++ + +K A + + L +
Sbjct: 13 RTPLSRARGLGSSHHGVSHFITERVSGLALAPLSLWGVYSALKLIGADQHTVAAWLGHPL 72
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI-IFCLFSLLKI 124
A ++ L +S VH+ +QV+IEDY+H R L + + FV +L +FS+LK+
Sbjct: 73 NAVLLLLLLLSALVHLSNAVQVVIEDYVH-RFTSKSALVIGNLFVCVLAGAIGIFSILKV 131
Query: 125 AI 126
A+
Sbjct: 132 AL 133
>gi|56695274|ref|YP_165622.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria pomeroyi DSS-3]
gi|56677011|gb|AAV93677.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria pomeroyi DSS-3]
Length = 123
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT HF + +++A + I F+ F P++ ++ S A +
Sbjct: 9 RAVGMGSAKTGTAHFWAMKVSSVALLILIPLFVFTFGPMLGEPHQAVLDYFSRPFPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L + H G QV+IEDY+H + KI+ + + C LF++ +IA+
Sbjct: 69 ALTLVVGFKHFADGAQVLIEDYVHGLMQKILIILVI-CLSYAAAATGLFAIARIAL 123
>gi|254463366|ref|ZP_05076782.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2083]
gi|206679955|gb|EDZ44442.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium HTCC2083]
Length = 123
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT HF + +++A + + FI F + Y ++++ A +
Sbjct: 9 RATGMGSAKSGTHHFWSMKVSSVALLFLLPMFIFTFGGTLGSNYAEVMTYFGRPFPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L T+ H G QV+IEDY+H + K++ + + +C +F++ K+A+
Sbjct: 69 ALTTLVGFKHFNDGAQVLIEDYVHGLMQKVLIILL-TCLSYGAAAVGIFAIAKLAL 123
>gi|163734149|ref|ZP_02141590.1| succinate dehydrogenase [Roseobacter litoralis Och 149]
gi|161392685|gb|EDQ17013.1| succinate dehydrogenase [Roseobacter litoralis Och 149]
Length = 123
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT H ++ A + I F+ F A YE++ + + A I
Sbjct: 9 RAVGLGSAKSGTEHHWSMTVSSGALLILIPLFVFTFGPMLGASYEEVTAYFARPFPAVIA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
GL I H G+Q ++EDY+H K+ + M +C + F L++++++A+
Sbjct: 69 GLTIIVTFKHFAGGVQALLEDYVHGVAQKVAIVAM-TCVSYAAMGFGLYAIVRLAL 123
>gi|163744266|ref|ZP_02151626.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanibulbus indolifex HEL-45]
gi|161381084|gb|EDQ05493.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanibulbus indolifex HEL-45]
Length = 120
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT HF + +++A + I F+ F YE+I++ + A +
Sbjct: 6 RALGLGSAKTGTAHFWAMKVSSLALLVLIPLFVFTFGSALGGTYEEILAYYARPFPAIVA 65
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
L I H G+QV+IEDY+H KI + M
Sbjct: 66 ALTLIVGFKHFNDGVQVLIEDYVHGLANKIAIIVMT 101
>gi|239947121|ref|ZP_04698874.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsia endosymbiont of Ixodes scapularis]
gi|239921397|gb|EER21421.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsia endosymbiont of Ixodes scapularis]
Length = 125
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I I+ I F + + I+
Sbjct: 1 MVYDFKAKIVKAKNSGSAKSGSHHWLLQRATGIILALCSIWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L I L T++IS+ H LGM+V+IEDY+ Y L+ + ++++ +FC+
Sbjct: 61 LKK-PFNVIALLITVAISLYHAMLGMRVVIEDYVSYHKLR-------NTLIIIVQLFCIV 112
Query: 120 SL 121
++
Sbjct: 113 TI 114
>gi|260431520|ref|ZP_05785491.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter lacuscaerulensis ITI-1157]
gi|260415348|gb|EEX08607.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter lacuscaerulensis ITI-1157]
Length = 123
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT HF + +++A + + F+ F PY+ ++ S A +
Sbjct: 9 RALGLGSAKSGTQHFWAMKVSSVALLILVPLFVFTFGPTLGQPYDVMLDYYSRPFPAIVA 68
Query: 71 GLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L T+++ H G QV+IEDY+H L K++ + + +C +F++ +IA+
Sbjct: 69 AL-TLAVGFKHFADGAQVMIEDYVHGTLEKVLIILV-TCLSYGAAAVGIFAIARIAL 123
>gi|254512425|ref|ZP_05124492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium KLH11]
gi|221536136|gb|EEE39124.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium KLH11]
Length = 123
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT HF + +++A + + FI F PY+ ++ S A +
Sbjct: 9 RAVGLGSAKSGTAHFWSMKVSSVALLILVPLFIFTFGPILGQPYDVVLDYYSRPFPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L + H G QV+IEDY+H + K++
Sbjct: 69 ALTLLVGFKHFADGAQVMIEDYVHGTMEKVL 99
>gi|126725052|ref|ZP_01740895.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2150]
gi|126706216|gb|EBA05306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2150]
Length = 123
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK+GT HF ++IA + FI F D Y + + + A +
Sbjct: 9 RANGMGSAKEGTHHFWSMTVSSIALAILMPLFIFNFGPMLDESYADVQAHFARPYPAILT 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
GL I H ++G Q +IEDY+ KI + + S + LF+L IA+
Sbjct: 69 GLTLIVAFTHFKMGAQTMIEDYVKGGARKITIIAV-SLLSYAAMATGLFALASIAL 123
>gi|229586367|ref|YP_002844868.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia africae ESF-5]
gi|228021417|gb|ACP53125.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia africae ESF-5]
Length = 126
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFMLTNKNNDINIIMLW 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ IS+ H LGM+V+IEDYI Y L+ + ++++ +FC+
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLR-------NTLIIIVQLFCIV 113
Query: 120 SLL 122
+++
Sbjct: 114 TIV 116
>gi|110678933|ref|YP_681940.1| hypothetical protein RD1_1627 [Roseobacter denitrificans OCh 114]
gi|109455049|gb|ABG31254.1| suc [Roseobacter denitrificans OCh 114]
Length = 123
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT H ++ A + I F+ F A Y+++ + + A I
Sbjct: 9 RAVGLGSAKSGTEHHWSMTVSSGALLILIPLFVFTFGPMLGASYDEVTAYFARPFPAVIA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
GL I H G+Q ++EDY+H K+ + M +C + F L++++++A+
Sbjct: 69 GLTIIVTFKHFAGGVQALLEDYVHGVAQKVAIVAM-TCVSYAAMGFGLYAVVRLAL 123
>gi|156934785|ref|YP_001438701.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Cronobacter sakazakii ATCC BAA-894]
gi|156533039|gb|ABU77865.1| hypothetical protein ESA_02625 [Cronobacter sakazakii ATCC BAA-894]
Length = 115
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R T+I +II+ I FF GD YE S+
Sbjct: 6 SALGR--------NGVHDFILVRATSIVMTLYIIYMIGFFAMNGDLTYEVWTGFFSSTFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L ISI VH +GM ++ DY+ + L+ LF+ V+ L+++ ++
Sbjct: 58 KVFTLLTLISILVHTWIGMWQVLTDYVKHLALR---LFLQLAIVVALVVYVIY 107
>gi|34580877|ref|ZP_00142357.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia sibirica 246]
gi|28262262|gb|EAA25766.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia sibirica 246]
Length = 126
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMLW 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ IS+ H LGM+V+IEDYI Y L+ + ++++ +FC+
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLR-------NTLIIIVQLFCIV 113
Query: 120 SLL 122
+++
Sbjct: 114 TIV 116
>gi|15892092|ref|NP_359806.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia conorii str. Malish 7]
gi|20137872|sp|Q92J98|DHSD_RICCN RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|15619215|gb|AAL02707.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia conorii str. Malish 7]
Length = 126
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMLW 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ IS+ H LGM+V+IEDYI Y L+ + ++++ +FC+
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLR-------NTLIIIVQLFCIV 113
Query: 120 SLL 122
+++
Sbjct: 114 TIV 116
>gi|260597121|ref|YP_003209692.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Cronobacter turicensis z3032]
gi|260216298|emb|CBA29265.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Cronobacter turicensis z3032]
Length = 115
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R T+I +II+ I FF GD YE S+
Sbjct: 6 SALGR--------NGVHDFILVRATSIVMTLYIIYMIGFFAMNGDLTYEVWTGFFSSTFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L +SI VH +GM ++ DY+ + L+ LF+ V+ L+++ ++
Sbjct: 58 KVFTLLTLVSILVHTWIGMWQVLTDYVKHLALR---LFLQLAIVVALVVYVIY 107
>gi|255262499|ref|ZP_05341841.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thalassiobium sp. R2A62]
gi|255104834|gb|EET47508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thalassiobium sp. R2A62]
Length = 123
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMGSAK GT H ++ A + + FI F YE++++ S V +++
Sbjct: 9 RAAGMGSAKQGTEHHWSMMVSSAALLILVPLFIFTFGAALGGTYEEVIAYYSR-PVPAVI 67
Query: 71 GLGTISIS-VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
+ T+ + +H + G+QV+IEDY+H KI + M
Sbjct: 68 AVLTLWVGFMHFKSGVQVLIEDYVHGVARKIAIIAM 103
>gi|84500177|ref|ZP_00998443.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola batsensis HTCC2597]
gi|84392111|gb|EAQ04379.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola batsensis HTCC2597]
Length = 123
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMG++K GT H + + ++IA + + F+ F + YE++V+ S A +
Sbjct: 9 RAVGMGASKTGTAHHWQMQISSIALLILVPLFVLNFGAILGSSYEEVVAHYSRPYPAIVA 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIH 94
L + H + G Q+ IEDYIH
Sbjct: 69 ALTLLVGMTHFKNGAQMAIEDYIH 92
>gi|159045406|ref|YP_001534200.1| hypothetical protein Dshi_2866 [Dinoroseobacter shibae DFL 12]
gi|157913166|gb|ABV94599.1| hypothetical protein Dshi_2866 [Dinoroseobacter shibae DFL 12]
Length = 123
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT H + +++ + + F+ F + APYE++++ L+ A +
Sbjct: 9 RAMGLGSAKSGTEHHWHMQVSSVGLLILVPLFLFTFGRVVGAPYEEVIAYLARPFPAIVT 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L + H + G+ V IEDY K + + M +C + LF++ ++A+
Sbjct: 69 ALMLVVGFDHFRHGVTVAIEDYAQGTTRKALIIAM-TCVSYGAMATGLFAIARLAL 123
>gi|254464400|ref|ZP_05077811.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium Y4I]
gi|206685308|gb|EDZ45790.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium Y4I]
Length = 123
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMG+AK GT H + +A+A + + F+ F YE+I + S +++
Sbjct: 9 RAVGMGAAKSGTAHHWSMQVSAVALLILVPLFVFTFGSALGGSYEEITAYYSR-PFPALV 67
Query: 71 GLGTISISV-HMQLGMQVIIEDYIH 94
+ TI + + H + G Q++IEDY+H
Sbjct: 68 AVLTIWVGMMHFKSGAQIMIEDYVH 92
>gi|157828043|ref|YP_001494285.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia rickettsii str. 'Sheila Smith']
gi|165932740|ref|YP_001649529.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
rickettsii str. Iowa]
gi|157800524|gb|ABV75777.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia rickettsii str. 'Sheila Smith']
gi|165907827|gb|ABY72123.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
rickettsii str. Iowa]
Length = 125
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWA 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + L T+ IS+ H LGM+V+IEDYI L+ + ++++ +FC+
Sbjct: 61 LKK-PFNVVALLITVVISLYHAMLGMRVVIEDYISCHKLR-------NTLIIIVQLFCIV 112
Query: 120 SLL 122
+++
Sbjct: 113 TIV 115
>gi|189184863|ref|YP_001938648.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Ikeda]
gi|189181634|dbj|BAG41414.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Ikeda]
Length = 129
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPYEQIVSVL 61
++++SL ++ + + K H+ QR +AI +P +++ + FF K +P E + V
Sbjct: 5 NLQNSLNTIKSLSTDKYCVQHWWYQRLSAILMLPLLVWLV-FFGKAIVQKSPVELVELVK 63
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
V I+ L I++ H +G++VIIEDY++ ++ + + + CF + ++ + S+
Sbjct: 64 YPYNVLMIILL-LITMFFHAAIGLKVIIEDYVNNLSVRYLLIVLVQCFTFVTVVAGIISI 122
Query: 122 LKIAI 126
+ + I
Sbjct: 123 ILLCI 127
>gi|148284920|ref|YP_001249010.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Boryong]
gi|146740359|emb|CAM80792.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Boryong]
Length = 129
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPYEQIVSVL 61
++++SL ++ + + K H+ QR +AI +P +++ + FF K +P E + V
Sbjct: 5 NLQNSLNTIKSLSTDKYCVQHWRYQRLSAILMLPLLVWLV-FFGKAIVQKSPVELVELVK 63
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
V I+ L I++ H +G++VIIEDY++ ++ + + + CF + ++ + S+
Sbjct: 64 YPYNVLMIILL-LITMFFHAAIGLKVIIEDYVNNLAVRYLLIVLVQCFTFVTVVAGIISI 122
Query: 122 LKIAI 126
+ + I
Sbjct: 123 ILLCI 127
>gi|238650697|ref|YP_002916550.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
peacockii str. Rustic]
gi|238624795|gb|ACR47501.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
peacockii str. Rustic]
Length = 125
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + L T+ IS+ H LGM+V+IEDYI L+ + ++++ +FC+
Sbjct: 61 LKK-PFNVVALLITVVISLYHAMLGMRVVIEDYISCHKLR-------NTLIIIVQLFCIV 112
Query: 120 SLL 122
+++
Sbjct: 113 TIV 115
>gi|157803314|ref|YP_001491863.1| hypothetical protein A1E_00650 [Rickettsia canadensis str. McKiel]
gi|157784577|gb|ABV73078.1| hypothetical protein A1E_00650 [Rickettsia canadensis str. McKiel]
Length = 125
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D + + + + GSAK G+ H++ QR TAI I+ I F + + I+
Sbjct: 1 MVYDFKVEIVKAKASGSAKSGSHHWLLQRVTAIILALCSIWLIYFTLTNKSSDLSIIMWE 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + L T+ IS+ H +G+Q++IEDYI N L+I+ LF
Sbjct: 61 LKK-PFNVVALLITVIISLYHAMIGVQIVIEDYIR----------CNKLLNTLIIVVKLF 109
Query: 120 SLLKIA 125
L+ IA
Sbjct: 110 CLVTIA 115
>gi|157964194|ref|YP_001499018.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia massiliae MTU5]
gi|157843970|gb|ABV84471.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia massiliae MTU5]
Length = 125
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++++ + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAAIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIH-YRLLKIMFLFMNSCFVLLLIIFCL 118
L + L T+ IS+ H LGM+V+IEDYI Y+L + ++++ +FC+
Sbjct: 61 LKK-PFNVVALLITVVISLYHAMLGMRVVIEDYISCYKL--------RNTLIIIVQLFCI 111
Query: 119 FSLL 122
+++
Sbjct: 112 VTIV 115
>gi|163738940|ref|ZP_02146353.1| malate dehydrogenase [Phaeobacter gallaeciensis BS107]
gi|163741816|ref|ZP_02149206.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Phaeobacter gallaeciensis 2.10]
gi|161384989|gb|EDQ09368.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Phaeobacter gallaeciensis 2.10]
gi|161387745|gb|EDQ12101.1| malate dehydrogenase [Phaeobacter gallaeciensis BS107]
Length = 123
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GMG+AK GT H + ++I + + F+ F YE+I + + +++
Sbjct: 9 RAVGMGAAKSGTAHHWSMQVSSIGLLILVPLFVFTFGSALGGSYEEITAYYAR-PFPALV 67
Query: 71 GLGTISIS-VHMQLGMQVIIEDYIH 94
L TI + +H + G Q++IEDY+H
Sbjct: 68 ALLTIWVGMMHFKSGAQIMIEDYVH 92
>gi|89053301|ref|YP_508752.1| succinate dehydrogenase subunit D [Jannaschia sp. CCS1]
gi|88862850|gb|ABD53727.1| succinate dehydrogenase subunit D [Jannaschia sp. CCS1]
Length = 123
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
RV G+GSAK GT T++A + FF+A + + +++ L A I+
Sbjct: 9 RVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLGKPVPALIV 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ H++ GMQ ++EDY H L K + + + + L L +L++IA+
Sbjct: 69 AAYLVVGMHHLRYGMQTLLEDYTH-GLTKKVSIIVTTILSYGLAAGGLVALMQIAL 123
>gi|315126698|ref|YP_004068701.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with sdhC [Pseudoalteromonas sp. SM9913]
gi|315015212|gb|ADT68550.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with sdhC [Pseudoalteromonas sp. SM9913]
Length = 115
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + YE + SN+A+ + + I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLAMPEVTYEAWTGLFSNLAMKGATLITLVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
VH ++G+ ++ DY+ L+
Sbjct: 70 VHTRIGLWQVLTDYVKNAKLR 90
>gi|90021754|ref|YP_527581.1| succinate dehydrogenase subunit D [Saccharophagus degradans 2-40]
gi|89951354|gb|ABD81369.1| succinate dehydrogenase subunit D [Saccharophagus degradans 2-40]
Length = 122
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QRF+A+ + IF +A+ + + YE+ + + V L ISI+
Sbjct: 10 RSGLSDWVAQRFSAVVLAAYTIFIVAYLVMHPGLTYEEWSGLFQQLWVRIFTLLVLISIA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
H +G+ ++ DYI R++ LF+ +
Sbjct: 70 AHGWIGLWGVLTDYITTRMIGSSALFLRTV 99
>gi|332535003|ref|ZP_08410819.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035570|gb|EGI72063.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pseudoalteromonas haloplanktis ANT/505]
Length = 115
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + +E + SN+A+ + I I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLITLICIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
VH ++G+ ++ DY+ L+
Sbjct: 70 VHTRIGLWQVLTDYVKCSKLR 90
>gi|77360591|ref|YP_340166.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with sdhC [Pseudoalteromonas haloplanktis TAC125]
gi|76875502|emb|CAI86723.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas haloplanktis TAC125]
Length = 115
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + +E + SN+A+ + + I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLIALVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
VH ++G+ ++ DY+ L+
Sbjct: 70 VHTRIGLWQVLTDYVKCAKLR 90
>gi|94499005|ref|ZP_01305543.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanobacter sp. RED65]
gi|94428637|gb|EAT13609.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanobacter sp. RED65]
Length = 115
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + F + D Y Q S+ AV L IS
Sbjct: 9 SRSGLSDWLIQRVSAVILALYTVFIVGFLLANPDLDYAQWKEFFSSNAVRIFSLLALIST 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
H +GM + DY ++ + I F+F +CF+ L +
Sbjct: 69 VAHAWIGMWTVATDY--FKPVSIRFVFQVACFLALFV 103
>gi|148652074|ref|YP_001279167.1| succinate dehydrogenase, hydrophobic membrane anchor [Psychrobacter
sp. PRwf-1]
gi|148571158|gb|ABQ93217.1| succinate dehydrogenase subunit D [Psychrobacter sp. PRwf-1]
Length = 127
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ G G G+ ++ QR +A+ + + + FF+ GD Y+Q VS + ++
Sbjct: 3 RNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMSLP 62
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ + + I+++ H +GM + DY+ L+ L + + ++ ++++ + ++
Sbjct: 63 MRLLSLVAIIALAAHAWVGMWTVFTDYVKSTGLR---LVLQAAMIIAILVYLFWGVM 116
>gi|57238922|ref|YP_180058.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
gi|58578854|ref|YP_197066.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
gi|57161001|emb|CAH57907.1| putative succinate dehydrogenase cytochrome b small subunit
[Ehrlichia ruminantium str. Welgevonden]
gi|58417480|emb|CAI26684.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
Length = 116
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV-LSNVAVASIMGLG 73
MGS+ H++ QR TA +PF ++F F+++ + + + LS V + +I +
Sbjct: 1 MGSS---VYHWLSQRLTAFIMLPFSVWFFYKFLRFLSIVCKSVSELDLSFVELNTIDVIA 57
Query: 74 TISISV----HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
++ + H LG+QVI+EDY+ +L++ L + V + ++F +F++ I++
Sbjct: 58 SVCFFIIAFYHAILGLQVILEDYVQSSVLRVSILLLIKGIVTVTLLFLIFAIFNISL 114
>gi|157825306|ref|YP_001493026.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia akari str. Hartford]
gi|157799264|gb|ABV74518.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia akari str. Hartford]
Length = 125
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D + + + + GSAK G+ ++ QR T I I+ I F + + I+
Sbjct: 1 MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISV-HMQLGMQVIIEDYI 93
L + L T++IS+ H LGM+V+IEDYI
Sbjct: 61 LKK-PFNVVALLITVAISLYHSMLGMRVVIEDYI 93
>gi|296445360|ref|ZP_06887318.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylosinus trichosporium OB3b]
gi|296257121|gb|EFH04190.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylosinus trichosporium OB3b]
Length = 126
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 10 GRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASI 69
G+ S + G+ H + R +A A P + + F YE + L + +I
Sbjct: 8 GKGAAFTSDRSGSLHALAMRHSARALAPLGLLSVWFIANLSGQSYEAARAHLGR-PLPAI 66
Query: 70 MGLGTISI-SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
+ I I S H +LGM+ I+EDY+H LK L +N + + S++ IA
Sbjct: 67 TLIAFICIASYHARLGMETIVEDYVHDEALKARALQINKWLTVAIAASWTLSIMIIA 123
>gi|58616912|ref|YP_196111.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Gardel]
gi|58416524|emb|CAI27637.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Gardel]
Length = 116
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV-LSNVAVASIMGLG 73
MGS+ H++ QR TA +PF ++F F+++ + + LS V + +I +
Sbjct: 1 MGSS---VYHWLSQRVTAFIVLPFSVWFFYKFLRFLSIVCRSVSELDLSFVELNTIDVIA 57
Query: 74 TISISV----HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
++ + H LG+QVI+EDY+ +L++ L + V + ++F +F++ I++
Sbjct: 58 SVCFFIIAFYHAVLGLQVILEDYVQSSVLRVSILLLIKGIVTVTLLFLVFAIFNISL 114
>gi|323976307|gb|EGB71397.1| succinate dehydrogenase [Escherichia coli TW10509]
Length = 115
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATTGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|331672238|ref|ZP_08373029.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA280]
gi|331070433|gb|EGI41797.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA280]
Length = 115
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|331656739|ref|ZP_08357701.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA206]
gi|331054987|gb|EGI26996.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA206]
Length = 111
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|218694146|ref|YP_002401813.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 55989]
gi|218350878|emb|CAU96576.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 55989]
Length = 115
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVVFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|16128697|ref|NP_415250.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. MG1655]
gi|24112002|ref|NP_706512.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 2a str. 301]
gi|26246690|ref|NP_752730.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli CFT073]
gi|30062115|ref|NP_836286.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 2a str. 2457T]
gi|74311246|ref|YP_309665.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sonnei Ss046]
gi|82543149|ref|YP_407096.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella boydii Sb227]
gi|82775990|ref|YP_402337.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella dysenteriae Sd197]
gi|89107580|ref|AP_001360.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. W3110]
gi|91209756|ref|YP_539742.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UTI89]
gi|110640931|ref|YP_668659.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 536]
gi|110804650|ref|YP_688170.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 5 str. 8401]
gi|117622916|ref|YP_851829.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli APEC O1]
gi|157156814|ref|YP_001461882.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli E24377A]
gi|157160202|ref|YP_001457520.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli HS]
gi|170020933|ref|YP_001725887.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli ATCC 8739]
gi|170080389|ref|YP_001729709.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. DH10B]
gi|170684264|ref|YP_001742823.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli SMS-3-5]
gi|188494894|ref|ZP_03002164.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 53638]
gi|191167187|ref|ZP_03029006.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B7A]
gi|191174074|ref|ZP_03035590.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli F11]
gi|193065515|ref|ZP_03046583.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E22]
gi|193070649|ref|ZP_03051586.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E110019]
gi|194429057|ref|ZP_03061588.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B171]
gi|194433999|ref|ZP_03066270.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1012]
gi|194439238|ref|ZP_03071318.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 101-1]
gi|209917973|ref|YP_002292057.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli SE11]
gi|215485741|ref|YP_002328172.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O127:H6 str. E2348/69]
gi|218549713|ref|YP_002383504.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia fergusonii ATCC 35469]
gi|218553249|ref|YP_002386162.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli IAI1]
gi|218557638|ref|YP_002390551.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli S88]
gi|218688516|ref|YP_002396728.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli ED1a]
gi|218699077|ref|YP_002406706.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli IAI39]
gi|218704039|ref|YP_002411558.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UMN026]
gi|227884311|ref|ZP_04002116.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 83972]
gi|237707316|ref|ZP_04537797.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 3_2_53FAA]
gi|238899987|ref|YP_002925783.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli BW2952]
gi|253774307|ref|YP_003037138.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160792|ref|YP_003043900.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli B str. REL606]
gi|256021204|ref|ZP_05435069.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|256023676|ref|ZP_05437541.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 4_1_40B]
gi|260842929|ref|YP_003220707.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O103:H2 str. 12009]
gi|260853957|ref|YP_003227848.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O26:H11 str. 11368]
gi|260866853|ref|YP_003233255.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O111:H- str. 11128]
gi|293403966|ref|ZP_06647960.1| sdhD [Escherichia coli FVEC1412]
gi|293409096|ref|ZP_06652672.1| succinate dehydrogenase [Escherichia coli B354]
gi|293413999|ref|ZP_06656648.1| succinate dehydrogenase [Escherichia coli B185]
gi|293432991|ref|ZP_06661419.1| succinate dehydrogenase [Escherichia coli B088]
gi|297521385|ref|ZP_06939771.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli OP50]
gi|298379742|ref|ZP_06989347.1| sdhD [Escherichia coli FVEC1302]
gi|300816370|ref|ZP_07096592.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 107-1]
gi|300822990|ref|ZP_07103125.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 119-7]
gi|300900717|ref|ZP_07118866.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 198-1]
gi|300906979|ref|ZP_07124648.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 84-1]
gi|300918381|ref|ZP_07134981.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 115-1]
gi|300926125|ref|ZP_07141938.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 182-1]
gi|300929474|ref|ZP_07144942.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 187-1]
gi|300937821|ref|ZP_07152617.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 21-1]
gi|300947199|ref|ZP_07161409.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 116-1]
gi|300957668|ref|ZP_07169858.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 175-1]
gi|300989868|ref|ZP_07178997.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 45-1]
gi|300996467|ref|ZP_07181441.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 200-1]
gi|301020817|ref|ZP_07184881.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 69-1]
gi|301027098|ref|ZP_07190470.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 196-1]
gi|301046046|ref|ZP_07193226.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 185-1]
gi|301305208|ref|ZP_07211306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 124-1]
gi|301327914|ref|ZP_07221085.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 78-1]
gi|301648025|ref|ZP_07247792.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 146-1]
gi|306812869|ref|ZP_07447062.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli NC101]
gi|307137333|ref|ZP_07496689.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli H736]
gi|307314813|ref|ZP_07594407.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli W]
gi|309786386|ref|ZP_07681012.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1617]
gi|309797435|ref|ZP_07691827.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 145-7]
gi|312965152|ref|ZP_07779389.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 2362-75]
gi|312970799|ref|ZP_07784978.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1827-70]
gi|331641223|ref|ZP_08342358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H736]
gi|331645871|ref|ZP_08346974.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M605]
gi|331651720|ref|ZP_08352739.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M718]
gi|331662075|ref|ZP_08362998.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA143]
gi|331667088|ref|ZP_08367953.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA271]
gi|331676404|ref|ZP_08377101.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H591]
gi|331682153|ref|ZP_08382775.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H299]
gi|332282430|ref|ZP_08394843.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|81175274|sp|P0AC45|DHSD_ECOL6 RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|81175275|sp|P0AC44|DHSD_ECOLI RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|81175276|sp|P0AC46|DHSD_SHIFL RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|28948821|pdb|1NEK|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Ubiquinone Bound
gi|28948825|pdb|1NEN|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Dinitrophenol-17 Inhibitor Co-Crystallized At The
Ubiquinone Binding Site
gi|85544087|pdb|2ACZ|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone
Binding Site
gi|256599503|pdb|2WDQ|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599507|pdb|2WDQ|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599511|pdb|2WDQ|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599515|pdb|2WDV|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599519|pdb|2WDV|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599523|pdb|2WDV|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|259045636|pdb|2WDR|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045640|pdb|2WDR|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045644|pdb|2WDR|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|304445591|pdb|2WP9|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445595|pdb|2WP9|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445599|pdb|2WP9|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445631|pdb|2WU2|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445635|pdb|2WU2|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445639|pdb|2WU2|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|26107089|gb|AAN79273.1|AE016757_177 Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli CFT073]
gi|42924|emb|CAA25486.1| unnamed protein product [Escherichia coli]
gi|146198|gb|AAA23894.1| succinate dehydrogenase [Escherichia coli K-12]
gi|1651318|dbj|BAA35389.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K12 substr. W3110]
gi|1786941|gb|AAC73816.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. MG1655]
gi|24050818|gb|AAN42219.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 2a
str. 301]
gi|30040360|gb|AAP16092.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 2a
str. 2457T]
gi|73854723|gb|AAZ87430.1| succinate dehydrogenase, hydrophobic subunit [Shigella sonnei
Ss046]
gi|81240138|gb|ABB60848.1| succinate dehydrogenase, hydrophobic subunit [Shigella dysenteriae
Sd197]
gi|81244560|gb|ABB65268.1| succinate dehydrogenase, hydrophobic subunit [Shigella boydii
Sb227]
gi|91071330|gb|ABE06211.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli
UTI89]
gi|110342523|gb|ABG68760.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 536]
gi|110614198|gb|ABF02865.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 5
str. 8401]
gi|115512040|gb|ABJ00115.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli APEC O1]
gi|157065882|gb|ABV05137.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli HS]
gi|157078844|gb|ABV18552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E24377A]
gi|169755861|gb|ACA78560.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli ATCC 8739]
gi|169888224|gb|ACB01931.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. DH10B]
gi|170521982|gb|ACB20160.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli SMS-3-5]
gi|188490093|gb|EDU65196.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 53638]
gi|190902735|gb|EDV62465.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B7A]
gi|190905682|gb|EDV65305.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli F11]
gi|192926804|gb|EDV81430.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E22]
gi|192956037|gb|EDV86503.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E110019]
gi|194412888|gb|EDX29179.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B171]
gi|194417764|gb|EDX33862.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1012]
gi|194421823|gb|EDX37830.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 101-1]
gi|209911232|dbj|BAG76306.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli SE11]
gi|215263813|emb|CAS08150.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O127:H6 str. E2348/69]
gi|218357254|emb|CAQ89889.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia fergusonii ATCC 35469]
gi|218360017|emb|CAQ97564.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli IAI1]
gi|218364407|emb|CAR02087.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli S88]
gi|218369063|emb|CAR16817.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli IAI39]
gi|218426080|emb|CAR06898.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli ED1a]
gi|218431136|emb|CAR12012.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli UMN026]
gi|222032459|emb|CAP75198.1| Succinate dehydrogenase hydrophobic membrane anchor [Escherichia
coli LF82]
gi|226898526|gb|EEH84785.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 3_2_53FAA]
gi|227838397|gb|EEJ48863.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 83972]
gi|238863589|gb|ACR65587.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli BW2952]
gi|242376484|emb|CAQ31188.1| succinate dehydrogenase membrane protein, subunit of succinate
dehydrogenase [Escherichia coli BL21(DE3)]
gi|253325351|gb|ACT29953.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972693|gb|ACT38364.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli B str. REL606]
gi|253976887|gb|ACT42557.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli BL21(DE3)]
gi|257752606|dbj|BAI24108.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O26:H11 str. 11368]
gi|257758076|dbj|BAI29573.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O103:H2 str. 12009]
gi|257763209|dbj|BAI34704.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O111:H- str. 11128]
gi|260450124|gb|ACX40546.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli DH1]
gi|281177865|dbj|BAI54195.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli SE15]
gi|281599963|gb|ADA72947.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Shigella flexneri 2002017]
gi|284920500|emb|CBG33562.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 042]
gi|291323810|gb|EFE63232.1| succinate dehydrogenase [Escherichia coli B088]
gi|291428552|gb|EFF01577.1| sdhD [Escherichia coli FVEC1412]
gi|291434057|gb|EFF07030.1| succinate dehydrogenase [Escherichia coli B185]
gi|291469564|gb|EFF12048.1| succinate dehydrogenase [Escherichia coli B354]
gi|294490933|gb|ADE89689.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli IHE3034]
gi|298279440|gb|EFI20948.1| sdhD [Escherichia coli FVEC1302]
gi|299879432|gb|EFI87643.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 196-1]
gi|300301963|gb|EFJ58348.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 185-1]
gi|300304521|gb|EFJ59041.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 200-1]
gi|300315613|gb|EFJ65397.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 175-1]
gi|300355776|gb|EFJ71646.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 198-1]
gi|300398463|gb|EFJ82001.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 69-1]
gi|300401200|gb|EFJ84738.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 84-1]
gi|300407271|gb|EFJ90809.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 45-1]
gi|300414444|gb|EFJ97754.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 115-1]
gi|300417824|gb|EFK01135.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 182-1]
gi|300453185|gb|EFK16805.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 116-1]
gi|300457186|gb|EFK20679.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 21-1]
gi|300462583|gb|EFK26076.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 187-1]
gi|300524531|gb|EFK45600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 119-7]
gi|300531060|gb|EFK52122.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 107-1]
gi|300839520|gb|EFK67280.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 124-1]
gi|300845557|gb|EFK73317.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 78-1]
gi|301073851|gb|EFK88657.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 146-1]
gi|305853632|gb|EFM54071.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli NC101]
gi|306905711|gb|EFN36239.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli W]
gi|307552574|gb|ADN45349.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli ABU 83972]
gi|307627863|gb|ADN72167.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UM146]
gi|308118959|gb|EFO56221.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 145-7]
gi|308925780|gb|EFP71261.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1617]
gi|309700944|emb|CBJ00241.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli ETEC H10407]
gi|310336560|gb|EFQ01727.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1827-70]
gi|312290243|gb|EFR18126.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 2362-75]
gi|312945247|gb|ADR26074.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O83:H1 str. NRG 857C]
gi|313649637|gb|EFS14061.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2a str. 2457T]
gi|315059965|gb|ADT74292.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli W]
gi|315135378|dbj|BAJ42537.1| sdhD [Escherichia coli DH1]
gi|315257639|gb|EFU37607.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 85-1]
gi|315287164|gb|EFU46576.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 110-3]
gi|315292035|gb|EFU51387.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 153-1]
gi|315299239|gb|EFU58493.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 16-3]
gi|315614596|gb|EFU95238.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 3431]
gi|320177265|gb|EFW52271.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella dysenteriae CDC 74-1112]
gi|320179438|gb|EFW54395.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella boydii ATCC 9905]
gi|320182927|gb|EFW57796.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella flexneri CDC 796-83]
gi|320194120|gb|EFW68752.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli WV_060327]
gi|320198159|gb|EFW72763.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli EC4100B]
gi|323153765|gb|EFZ40012.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli EPECa14]
gi|323158772|gb|EFZ44785.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E128010]
gi|323163880|gb|EFZ49690.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella sonnei 53G]
gi|323170841|gb|EFZ56491.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli LT-68]
gi|323180040|gb|EFZ65596.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1180]
gi|323185119|gb|EFZ70485.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1357]
gi|323191067|gb|EFZ76332.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli RN587/1]
gi|323379475|gb|ADX51743.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli KO11]
gi|323938300|gb|EGB34557.1| succinate dehydrogenase [Escherichia coli E1520]
gi|323942944|gb|EGB39108.1| succinate dehydrogenase [Escherichia coli E482]
gi|323947013|gb|EGB43027.1| succinate dehydrogenase [Escherichia coli H120]
gi|323952719|gb|EGB48587.1| succinate dehydrogenase [Escherichia coli H252]
gi|323958466|gb|EGB54172.1| succinate dehydrogenase [Escherichia coli H263]
gi|323963103|gb|EGB58673.1| succinate dehydrogenase [Escherichia coli H489]
gi|323967429|gb|EGB62849.1| succinate dehydrogenase [Escherichia coli M863]
gi|323972007|gb|EGB67227.1| succinate dehydrogenase [Escherichia coli TA007]
gi|324006246|gb|EGB75465.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 57-2]
gi|324010443|gb|EGB79662.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 60-1]
gi|324020371|gb|EGB89590.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 117-3]
gi|324114832|gb|EGC08800.1| succinate dehydrogenase [Escherichia fergusonii B253]
gi|324116263|gb|EGC10184.1| succinate dehydrogenase [Escherichia coli E1167]
gi|325498103|gb|EGC95962.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia fergusonii ECD227]
gi|327254401|gb|EGE66023.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli STEC_7v]
gi|330910471|gb|EGH38981.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli AA86]
gi|331038021|gb|EGI10241.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H736]
gi|331044623|gb|EGI16750.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M605]
gi|331049998|gb|EGI22056.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M718]
gi|331060497|gb|EGI32461.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA143]
gi|331065444|gb|EGI37337.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA271]
gi|331075897|gb|EGI47194.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H591]
gi|331080577|gb|EGI51753.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H299]
gi|332093782|gb|EGI98836.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii 5216-82]
gi|332096512|gb|EGJ01508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 155-74]
gi|332097688|gb|EGJ02663.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii 3594-74]
gi|332104782|gb|EGJ08128.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|332342057|gb|AEE55391.1| succinate dehydrogenase, hydrophobic membrane anchor protein SdhD
[Escherichia coli UMNK88]
gi|332760913|gb|EGJ91201.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 4343-70]
gi|332761362|gb|EGJ91648.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2747-71]
gi|332763960|gb|EGJ94198.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-671]
gi|332768181|gb|EGJ98366.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2930-71]
gi|333007369|gb|EGK26849.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri VA-6]
gi|333008010|gb|EGK27486.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-218]
gi|333010163|gb|EGK29598.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-272]
gi|333021433|gb|EGK40683.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-304]
Length = 115
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|15800426|ref|NP_286438.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 EDL933]
gi|15830001|ref|NP_308774.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. Sakai]
gi|168750653|ref|ZP_02775675.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4113]
gi|168757175|ref|ZP_02782182.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4401]
gi|168764003|ref|ZP_02789010.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767162|ref|ZP_02792169.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4486]
gi|168779205|ref|ZP_02804212.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4076]
gi|168786875|ref|ZP_02811882.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC869]
gi|168801369|ref|ZP_02826376.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC508]
gi|195939063|ref|ZP_03084445.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. EC4024]
gi|208807233|ref|ZP_03249570.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4206]
gi|208815555|ref|ZP_03256734.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4045]
gi|208823090|ref|ZP_03263408.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4042]
gi|209398560|ref|YP_002269345.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4115]
gi|217325246|ref|ZP_03441330.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. TW14588]
gi|254791868|ref|YP_003076705.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. TW14359]
gi|261224423|ref|ZP_05938704.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. FRIK2000]
gi|261254586|ref|ZP_05947119.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. FRIK966]
gi|291281654|ref|YP_003498472.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli O55:H7 str. CB9615]
gi|81170423|sp|Q8X9A9|DHSD_ECO57 RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|12513637|gb|AAG55046.1|AE005250_5 succinate dehydrogenase, hydrophobic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|13360205|dbj|BAB34170.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|188015182|gb|EDU53304.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002984|gb|EDU71970.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4076]
gi|189355801|gb|EDU74220.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363457|gb|EDU81876.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4486]
gi|189365920|gb|EDU84336.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4501]
gi|189373110|gb|EDU91526.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC869]
gi|189376492|gb|EDU94908.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC508]
gi|208727034|gb|EDZ76635.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732203|gb|EDZ80891.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4045]
gi|208737283|gb|EDZ84967.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4042]
gi|209159960|gb|ACI37393.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4115]
gi|209776528|gb|ACI86576.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776530|gb|ACI86577.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776532|gb|ACI86578.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776534|gb|ACI86579.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776536|gb|ACI86580.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|217321467|gb|EEC29891.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591268|gb|ACT70629.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. TW14359]
gi|290761527|gb|ADD55488.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli O55:H7 str. CB9615]
gi|320193116|gb|EFW67756.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC1212]
gi|320637969|gb|EFX07738.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. G5101]
gi|320643364|gb|EFX12544.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H- str. 493-89]
gi|320648713|gb|EFX17346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H- str. H 2687]
gi|320654297|gb|EFX22350.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659930|gb|EFX27472.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O55:H7 str. USDA 5905]
gi|320664754|gb|EFX31892.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. LSU-61]
gi|326341540|gb|EGD65330.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. 1044]
gi|326345758|gb|EGD69497.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. 1125]
Length = 115
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFCASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|119472930|ref|ZP_01614803.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonadales bacterium TW-7]
gi|119444648|gb|EAW25957.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonadales bacterium TW-7]
Length = 115
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TA+ + IF I +F+ + +E + SN+A+ + + I
Sbjct: 10 RDGVQDYVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLVTLVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
VH ++G+ ++ DY+ L+
Sbjct: 70 VHTRIGLWQVLTDYVKNSKLR 90
>gi|329847591|ref|ZP_08262619.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis biprosthecum C19]
gi|328842654|gb|EGF92223.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis biprosthecum C19]
Length = 127
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIF--FIAFFIKYG--DAPYEQIVSVLSNVAVASIMGL 72
S K G G ++ +RFT+IA IP ++ + AF I D + + +A+A+ M
Sbjct: 16 SEKHGAGEWLAERFTSIALIPLTLWAAYAAFTIAGTGYDGALAFVAKPFNILAIAATM-- 73
Query: 73 GTISISVHMQLGMQVIIEDYI 93
+ + HM +G++VII+DYI
Sbjct: 74 --LITAWHMYMGVKVIIDDYI 92
>gi|254449958|ref|ZP_05063395.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 238]
gi|198264364|gb|EDY88634.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 238]
Length = 123
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA---PYEQIVSVLSNVAVA 67
R GMGSAK GT H + +++A I F+ YG A YE + +
Sbjct: 9 RAVGMGSAKSGTEHHWQMIVSSVALTGLIPLFV---FTYGAALGMSYEDAAAYYAR-PFP 64
Query: 68 SIMGLGTISIS-VHMQLGMQVIIEDYIH 94
SI+G+ T+ + +H + G+Q +IEDY H
Sbjct: 65 SIVGILTLLVGFLHFKGGVQTLIEDYFH 92
>gi|170769071|ref|ZP_02903524.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia albertii TW07627]
gi|170122143|gb|EDS91074.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia albertii TW07627]
Length = 115
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ ++FF G+ Y+ + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVSFFATSGELTYDVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLM 92
>gi|254475941|ref|ZP_05089327.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria sp. R11]
gi|214030184|gb|EEB71019.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria sp. R11]
Length = 123
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYG-DAPYEQIVSVLSNVAVASI 69
R +G+GS + GT T+ +P + F+ F + G YE++++ S A +
Sbjct: 9 RAQGLGSGRTGTKTHWNAIVTSTLLVPAVPVFV-FTVGAGLGGTYEEVLAYFSRPVPAIL 67
Query: 70 MGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L I I +H ++ IEDY+H + + M + F LI L +L+K+A+
Sbjct: 68 TALSMIVIVLHTLHEVREAIEDYMH-GVSERMATIAATAFAYSLIAAGLLALIKLAL 123
>gi|187733765|ref|YP_001879377.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella boydii CDC 3083-94]
gi|187430757|gb|ACD10031.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii CDC 3083-94]
Length = 115
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ DY L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYAKPLALRLM 92
>gi|262277892|ref|ZP_06055685.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[alpha proteobacterium HIMB114]
gi|262224995|gb|EEY75454.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[alpha proteobacterium HIMB114]
Length = 109
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
++ QR A+ +PF+++F+ F Y V L+N I+ L + HM++G
Sbjct: 8 WLLQRVAAVILLPFLVWFLFHFDNLMTFSYSDAVMFLNNKIYVGILSLVFLLAFFHMRIG 67
Query: 85 MQVIIEDYIHYRLLK 99
M I EDYIH +K
Sbjct: 68 MGEIFEDYIHNEKVK 82
>gi|304445615|pdb|2WS3|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445619|pdb|2WS3|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445623|pdb|2WS3|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
Length = 115
Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI +H +GM ++ D++ L++M
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDFVKPLALRLM 92
>gi|149913138|ref|ZP_01901672.1| malate dehydrogenase [Roseobacter sp. AzwK-3b]
gi|149813544|gb|EDM73370.1| malate dehydrogenase [Roseobacter sp. AzwK-3b]
Length = 123
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+G+A GT H +A+ + F+ FF + ++++++ S+ A+A I+
Sbjct: 9 RAEGLGAAHSGTEHHWYMTVSAVGLALIVPLFLFFFGRALGGTHDEVMATFSHPAMA-IL 67
Query: 71 GLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L I + + H + G Q +IEDY K++ + + + LI +F++LKIA+
Sbjct: 68 TLLVIFVGLQHFRKGAQTMIEDYARGMTRKVLIIAV-TVLSYGLIATGVFAVLKIAL 123
>gi|15604004|ref|NP_220519.1| succinate dehydrogenase hydrophobic membrane anchor protein (sdhD)
[Rickettsia prowazekii str. Madrid E]
gi|729337|sp|P41086|DHSD_RICPR RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|409935|gb|AAA18326.1| putative hydrophobic subunit of succinate dehydrogenase [Rickettsia
prowazekii]
gi|3860695|emb|CAA14596.1| SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN (sdhD)
[Rickettsia prowazekii]
gi|292571720|gb|ADE29635.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia prowazekii Rp22]
Length = 125
Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAI--ANIPFIIFFIAFFIKYGDAPYEQIV 58
M +D ++ + + + +K G+ H++ QR T + A F + + F K D I+
Sbjct: 1 MIYDFKAEIIKAKNSSFSKSGSHHWLLQRVTGVILALCSFWLIYFMFTNKNNDI---NII 57
Query: 59 SVLSNVAVASIMGLGTISISV-HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
++ L T++IS+ H LGM+V+IEDYI+ L+ + + F +L I+
Sbjct: 58 MWEFKKPFNIVILLITVTISLYHSVLGMRVVIEDYINCHKLRNTLIIIVKLFCILTIV 115
>gi|237730686|ref|ZP_04561167.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter sp. 30_2]
gi|226906225|gb|EEH92143.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter sp. 30_2]
Length = 115
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|161504117|ref|YP_001571229.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865464|gb|ABX22087.1| hypothetical protein SARI_02215 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 115
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEVWTSFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|149201369|ref|ZP_01878344.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseovarius sp. TM1035]
gi|149145702|gb|EDM33728.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseovarius sp. TM1035]
Length = 123
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G G+A GT HF + + + I F+ F + ++++ S+ A+A +
Sbjct: 9 RAEGKGAAGTGTEHFWYMKLSGVGLALIIPVFLVAFGRALGGDRAEVLAAFSHPAMAILT 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
GL H G Q +IEDY H + + + + + LI LF+L KIA+
Sbjct: 69 GLVIFFGLRHYASGAQTMIEDYSHGSTRRGLIIAV-TVLSYGLIATGLFALAKIAL 123
>gi|88860186|ref|ZP_01134825.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas tunicata D2]
gi|88818180|gb|EAR27996.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas tunicata D2]
Length = 117
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 43/87 (49%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + +F + +FI + +E + +N+A+ + +
Sbjct: 12 RDGVQDFVSLRATALVLAAYALFILGYFIATPEVTFEAWQGLFANLAMKVFTLAALVCMM 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
+H ++G+ ++ DYI L+ + F+
Sbjct: 72 IHTRIGLWQVLTDYIKCAKLRAILSFV 98
>gi|205351997|ref|YP_002225798.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205271778|emb|CAR36612.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|326627037|gb|EGE33380.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 115
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFAASGELTFEAWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DYI
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYI 84
>gi|283784478|ref|YP_003364343.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter rodentium ICC168]
gi|282947932|emb|CBG87496.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter rodentium ICC168]
Length = 115
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGNLTWEAWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|270157996|ref|ZP_06186653.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|289163738|ref|YP_003453876.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
gi|269990021|gb|EEZ96275.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|288856911|emb|CBJ10725.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
Length = 115
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV--ASIMGLGTISI 77
+G ++ QR TA+ + IF I F + + + Q ++ SN+ V ASI+ L ++
Sbjct: 11 NGLKDWLIQRVTAVYFAVYTIFIIGFLLSHPGLSFAQWHALFSNIVVQIASIIAL--FAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSCFVLLLII 115
S+H +G+ + DY+ +L+ I+ L++ S FV L+I
Sbjct: 69 SLHAWIGLWTVTTDYMKCTVLRVSVQMIVVLWLLSQFVWGLMI 111
>gi|213023775|ref|ZP_03338222.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 110
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 1 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFT 52
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 53 KVFTLLALFSILIHAWIGMWQVLTDYV 79
>gi|16759672|ref|NP_455289.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16764103|ref|NP_459718.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142555|ref|NP_805897.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56414150|ref|YP_151225.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|161615041|ref|YP_001589006.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi
B str. SPB7]
gi|167552849|ref|ZP_02346600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167993009|ref|ZP_02574104.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168230611|ref|ZP_02655669.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168238876|ref|ZP_02663934.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168240584|ref|ZP_02665516.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|168264336|ref|ZP_02686309.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|168467711|ref|ZP_02701548.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168820139|ref|ZP_02832139.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443367|ref|YP_002039970.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194447545|ref|YP_002044763.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194471846|ref|ZP_03077830.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194733964|ref|YP_002113839.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197247879|ref|YP_002145691.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197265977|ref|ZP_03166051.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197363072|ref|YP_002142709.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|198246230|ref|YP_002214701.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200389482|ref|ZP_03216093.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930109|ref|ZP_03221130.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|207856177|ref|YP_002242828.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213053348|ref|ZP_03346226.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425382|ref|ZP_03358132.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213581388|ref|ZP_03363214.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213615565|ref|ZP_03371391.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213646452|ref|ZP_03376505.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213851936|ref|ZP_03381468.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|224582548|ref|YP_002636346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|289824380|ref|ZP_06543973.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|25284587|pir||AI0590 succinate dehydrogenase hydrophobic membrane anchor protein
[imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16419243|gb|AAL19677.1| succinate dehydrogenase, hydrophobic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16501965|emb|CAD05195.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29138186|gb|AAO69757.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56128407|gb|AAV77913.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|161364405|gb|ABX68173.1| hypothetical protein SPAB_02801 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402030|gb|ACF62252.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194405849|gb|ACF66068.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194458210|gb|EDX47049.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194709466|gb|ACF88687.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195629226|gb|EDX48594.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094549|emb|CAR60069.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197211582|gb|ACH48979.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197244232|gb|EDY26852.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288373|gb|EDY27754.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197940746|gb|ACH78079.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199601927|gb|EDZ00473.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321103|gb|EDZ06304.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205322595|gb|EDZ10434.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328887|gb|EDZ15651.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334665|gb|EDZ21429.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340151|gb|EDZ26915.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|205343043|gb|EDZ29807.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205347147|gb|EDZ33778.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|206707980|emb|CAR32269.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224467075|gb|ACN44905.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|261245996|emb|CBG23798.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992471|gb|ACY87356.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301157324|emb|CBW16813.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312911759|dbj|BAJ35733.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320085001|emb|CBY94790.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321226308|gb|EFX51359.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615834|gb|EFY12752.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322621230|gb|EFY18087.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623650|gb|EFY20488.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628922|gb|EFY25702.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634902|gb|EFY31632.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322636570|gb|EFY33274.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641779|gb|EFY38412.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322647811|gb|EFY44291.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322651859|gb|EFY48228.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322652644|gb|EFY48993.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322658452|gb|EFY54715.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322664945|gb|EFY61136.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322668385|gb|EFY64541.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322670527|gb|EFY66660.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322675267|gb|EFY71343.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322679693|gb|EFY75734.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322684831|gb|EFY80830.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|322713776|gb|EFZ05347.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323129043|gb|ADX16473.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323193149|gb|EFZ78368.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323200600|gb|EFZ85675.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323202272|gb|EFZ87320.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205461|gb|EFZ90427.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323213500|gb|EFZ98293.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323215334|gb|EGA00079.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323220912|gb|EGA05346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323228079|gb|EGA12215.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231015|gb|EGA15131.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234152|gb|EGA18241.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323238153|gb|EGA22211.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243588|gb|EGA27606.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323247388|gb|EGA31347.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323251376|gb|EGA35248.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323258485|gb|EGA42157.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260639|gb|EGA44248.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323264711|gb|EGA48213.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270975|gb|EGA54410.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|326622457|gb|EGE28802.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
gi|332987670|gb|AEF06653.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 115
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|238911663|ref|ZP_04655500.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
Length = 115
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|85711266|ref|ZP_01042325.1| Succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
baltica OS145]
gi|85694767|gb|EAQ32706.1| Succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
baltica OS145]
Length = 115
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 12 VRGMGS-AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
VR G+ + G FI R +A+ + +++F + FF D Y + SN+ +
Sbjct: 2 VREAGTFGRSGPHDFILLRASAVVMLLYVLFMVGFFASTADVTYANWTGLFSNLWMKVFT 61
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
L + VH +G+ ++ DY+ ++ F+ S ++++ + LF L +
Sbjct: 62 LLALTGVLVHGWIGIWQVLTDYVKASGVRAFIQFVFSVGLIIVWLTGLFVLWGV 115
>gi|89068122|ref|ZP_01155539.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola granulosus HTCC2516]
gi|89046361|gb|EAR52418.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola granulosus HTCC2516]
Length = 123
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G+GSAK GT + ++ A + ++ FI F YE+ V V + +I+
Sbjct: 9 RASGLGSAKRGTEKHWQMSLSSAALVVLVVLFIFTFGGALGMGYEEAV-VYYHRPFPAIV 67
Query: 71 GLGTISIS-VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L TI++ +H + G+Q++I+DY L + + +C + +F++ ++A+
Sbjct: 68 ALLTIAVGLLHFRGGVQILIDDYTR-GLTRKALIVGTACLSYAALAAGVFAIARLAL 123
>gi|126730328|ref|ZP_01746139.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sagittula stellata E-37]
gi|126709061|gb|EBA08116.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sagittula stellata E-37]
Length = 123
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R +G+GS + GT + T++A + + F+ F YE + + + A I
Sbjct: 9 RAQGLGSGRTGTQFHKRMLVTSMALVVLVPLFVFSFGSGFGGSYEDVQAFFARPFPAIIT 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
L + +H Q IEDY+H K++ + + + F +LI LF+L+++A+
Sbjct: 69 ALMLVVGVIHFNGEAQEAIEDYVHGTTGKLLAVAV-TAFSYVLIAAGLFALVRLAL 123
>gi|152969293|ref|YP_001334402.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206580925|ref|YP_002239653.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella pneumoniae 342]
gi|238893760|ref|YP_002918494.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Klebsiella pneumoniae NTUH-K2044]
gi|262041215|ref|ZP_06014427.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288936495|ref|YP_003440554.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella variicola At-22]
gi|290510450|ref|ZP_06549820.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. 1_1_55]
gi|329998779|ref|ZP_08303214.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. MS 92-3]
gi|150954142|gb|ABR76172.1| hypothetical protein KPN_00729 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206569983|gb|ACI11759.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella pneumoniae 342]
gi|238546076|dbj|BAH62427.1| succinate dehydrogenase hydrophobic subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259041444|gb|EEW42503.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288891204|gb|ADC59522.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella variicola At-22]
gi|289777166|gb|EFD85164.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. 1_1_55]
gi|328538565|gb|EGF64670.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. MS 92-3]
Length = 115
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATTGEISWEVWTGFFASGFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L +SI +H +GM ++ DY+ L+ L + V+ L+ + L+
Sbjct: 58 KVFTLLALVSILIHAWIGMWQVLTDYVKPLALR---LVLQLAIVVALVAYVLY 107
>gi|304445643|pdb|2WU5|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445647|pdb|2WU5|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445651|pdb|2WU5|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
Length = 115
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ YE + ++
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
L SI + +GM ++ DY+ L++M
Sbjct: 58 KVFTLLALFSILIMAWIGMWQVLTDYVKPLALRLM 92
>gi|283833992|ref|ZP_06353733.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citrobacter youngae ATCC 29220]
gi|291070126|gb|EFE08235.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citrobacter youngae ATCC 29220]
Length = 115
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G+ +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEVWTGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|85706757|ref|ZP_01037849.1| putative succinate dehydrogenase, hydrophobic membrane
anchorprotein [Roseovarius sp. 217]
gi|85668815|gb|EAQ23684.1| putative succinate dehydrogenase, hydrophobic membrane
anchorprotein [Roseovarius sp. 217]
Length = 123
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R G G+A GT HF + + + I F+ F + ++++ ++ +A +
Sbjct: 9 RAEGKGAAGTGTEHFWYMKLSGVGLALIIPVFLVAFGRALGGDRTEVMAAFAHPGMAILT 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
GL H G Q +IEDY H + + + + + + LI LF+L KIA+
Sbjct: 69 GLVIFFGLRHYASGAQTMIEDYSHGSMRRGLIIAV-TVLSYGLIATGLFALAKIAL 123
>gi|254438569|ref|ZP_05052063.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 307]
gi|198254015|gb|EDY78329.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 307]
Length = 123
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 22/95 (23%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFI-----AFFIKYGDA------PYEQIVS 59
R GMGSAK GT H + +++A I F+ A + Y DA P+ IV
Sbjct: 9 RAVGMGSAKSGTEHHWQMIVSSVALTGLIPLFVFTYGAALGMSYADASAYYARPFPSIVG 68
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIH 94
+L+ ++G +H + G+Q +IEDY+
Sbjct: 69 ILTL-----LVGF------LHFKGGVQTLIEDYVQ 92
>gi|145588944|ref|YP_001155541.1| succinate dehydrogenase, cytochrome b subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047350|gb|ABP33977.1| succinate dehydrogenase subunit D [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 121
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 8 SLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVA 67
+G R + A G +I QR TAI + F I + + G A YE S+ SN +
Sbjct: 5 QIGPKRLVVGAHYGLKEWIIQRVTAIVMVVFTIVLLVDYCITGSATYEGWSSLFSNQFMK 64
Query: 68 SIMGLGTISISVHMQLGMQVIIEDYI 93
+ L IS+ H +G++ I DYI
Sbjct: 65 LLTLLAFISLFYHAWIGIRDIWMDYI 90
>gi|332977197|gb|EGK13994.1| succinate dehydrogenase cytochrome b small subunit [Psychrobacter
sp. 1501(2011)]
Length = 128
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
D MR+ G G G+ ++ QR +A+ + + ++FF+ G YEQ V +
Sbjct: 3 DVLMRNDSGIKSATGLTGSGSRDWVMQRISAVVLAVYAVVIVSFFLFNGHIGYEQWVMFI 62
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++ + + L ++++VH +GM + DY+ L+I+ + + ++ ++++ + +
Sbjct: 63 MSMPMRLLSLLAIVALAVHAWVGMWTVFTDYVKSTGLRIV---LQAAMIIAILVYLFWGV 119
Query: 122 L 122
+
Sbjct: 120 M 120
>gi|311280403|ref|YP_003942634.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cloacae SCF1]
gi|308749598|gb|ADO49350.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cloacae SCF1]
Length = 115
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ + FF G +E S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMVGFFATTGTVTWEVWTGFFSSSFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|91208852|ref|YP_539013.1| succinate dehydrogenase subunit 4 [Physcomitrella patens]
gi|90991392|dbj|BAE93084.1| succinate dehydrogenase subunit 4 [Physcomitrella patens]
gi|328775201|gb|AEB39996.1| succinate dehydrogenase subunit 4 [Funaria hygrometrica]
Length = 86
Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
M + ++ GH++ QR TA + IP I+ +SNV S + L
Sbjct: 1 MKAHRETLGHWLLQRMTAASLIPTIL--------------------ISNV---STLILLN 37
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLF 119
I + H+ +G++ I+ DY+H+ + + I+ LF C +++ +F F
Sbjct: 38 ILLFWHIHVGIEEILTDYVHHEITRNWILILFRVFCLIIIKYVFLFF 84
>gi|325275375|ref|ZP_08141321.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas sp. TJI-51]
gi|324099492|gb|EGB97392.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas sp. TJI-51]
Length = 122
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYVVAHPGIDYTQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIH-----YRLLKIMFLFMNSCFVLLLIIF 116
H +GM I DY+ I FLF C V + F
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSATAIRFLFQAVCGVAMFAYF 112
>gi|229589334|ref|YP_002871453.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Pseudomonas fluorescens SBW25]
gi|312959840|ref|ZP_07774356.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens WH6]
gi|229361200|emb|CAY48064.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Pseudomonas fluorescens SBW25]
gi|311286006|gb|EFQ64571.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens WH6]
Length = 122
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + YEQ + S+ A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLVANPGIGYEQWHGLFSHNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C V + F
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATAVRFLFQAVCGVAMFAYF 112
>gi|146307529|ref|YP_001187994.1| succinate dehydrogenase subunit D [Pseudomonas mendocina ymp]
gi|145575730|gb|ABP85262.1| succinate dehydrogenase subunit D [Pseudomonas mendocina ymp]
Length = 122
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + + I Y + + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYTLFLLGYVICNPGMGYAEWHGLFSNTAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
SVH +GM I DY+ L + FLF C + + +F
Sbjct: 69 SVHAWVGMWTISTDYLTPMALGKWATGVRFLFQAVCGIAMFAMF 112
>gi|114764871|ref|ZP_01444053.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pelagibaca bermudensis HTCC2601]
gi|114542757|gb|EAU45780.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseovarius sp. HTCC2601]
Length = 123
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA---PYEQIVSVLSNVAVA 67
R G GSA G H F ++++ + I +G A Y+ + +S A
Sbjct: 9 RAVGKGSAHAGAEH---HWFMIVSSVALAFMLPTWLIVFGRALGSGYDAALDTMSRPFPA 65
Query: 68 SIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ L I VH Q G + +IEDY K++ + + F L+I +F+L+KIA+
Sbjct: 66 ILTALVLIVGMVHFQKGARTMIEDYTGGTTRKLLIMAF-AGFAYLMIACGIFALVKIAL 123
>gi|94311421|ref|YP_584631.1| succinate dehydrogenase subunit D [Cupriavidus metallidurans
CH34]
gi|93355273|gb|ABF09362.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Cupriavidus metallidurans CH34]
Length = 121
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
+++G R + A G ++ QR TA+ + F + A ++ +G+ YE + +N
Sbjct: 3 NNNIGPKRLVVGAHYGLKDWLAQRVTAVIMVVFTVVLAAVYLAFGNPSYEGWSGLFANQW 62
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYI 93
+ + L +S+ H +G++ I DY+
Sbjct: 63 MKILTFLTILSLLFHAWIGVRDIWMDYV 90
>gi|304310234|ref|YP_003809832.1| Succinate dehydrogenase, membrane anchor subunit [gamma
proteobacterium HdN1]
gi|301795967|emb|CBL44168.1| Succinate dehydrogenase, membrane anchor subunit [gamma
proteobacterium HdN1]
Length = 122
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP-YEQIVSVLSNVAVASIMGLGTIS 76
A+ G ++ QR +A+ + +F + + +G P Y ++ S + L IS
Sbjct: 9 ARSGLYDWMAQRVSAVVIAAYSLFLMGYLF-FGATPDYAAWHALFSQTWMRIFSLLALIS 67
Query: 77 ISVHMQLGMQVIIEDYIHYRLL 98
I+VH +GM I DY+ RLL
Sbjct: 68 IAVHAWVGMWTITTDYLTTRLL 89
>gi|71064680|ref|YP_263407.1| succinate dehydrogenase subunit D [Psychrobacter arcticus 273-4]
gi|71037665|gb|AAZ17973.1| succinate dehydrogenase subunit D [Psychrobacter arcticus 273-4]
Length = 134
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ +I QR +A+ + + + FF+ +GD Y + + ++++ + + ++++
Sbjct: 16 SGSRDWIVQRISAVVLAVYSVVLLGFFLTHGDVTYTEWSNFMTSLPMRLFSLVAVLALAG 75
Query: 80 HMQLGMQVIIEDYI 93
H +GM + DYI
Sbjct: 76 HAWIGMWTVFTDYI 89
>gi|104782664|ref|YP_609162.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas entomophila L48]
gi|95111651|emb|CAK16372.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas entomophila L48]
Length = 122
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLAAHPGIDYAQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIH-----YRLLKIMFLFMNSCFVLLLIIF 116
H +GM I DY+ I FLF C V + F
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSATAIRFLFQAVCGVAMFAYF 112
>gi|328789605|ref|XP_001121743.2| PREDICTED: protein Kr-h2 [Apis mellifera]
Length = 267
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTA---IANIPFIIFFIAFFIKYGDAPYEQIV 58
D +S+ +G G+ + H I + A + + IIF I + I+ PY
Sbjct: 5 DTASSNSVHMEKGWGALRQ---HIIDNKIKAALWVTRLFTIIFTIGYIIQIFGNPYNIYY 61
Query: 59 SVLSNVAVASIMGLGTISISVHMQLGMQVI----IEDYIHYRLLKIMFLFMNSCFVLLLI 114
+L N A S + L H+QL Q + +ED HY L ++FL+ ++L
Sbjct: 62 KILMNNAATSALRLH--QRVPHVQLNRQFLERLFVEDSCHYLLYSLIFLYTAPVTLVLTP 119
Query: 115 IFCLFSLLKIA 125
IF LF+L+ A
Sbjct: 120 IF-LFALMHFA 129
>gi|109898116|ref|YP_661371.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with SdhC [Pseudoalteromonas atlantica T6c]
gi|109700397|gb|ABG40317.1| succinate dehydrogenase subunit D [Pseudoalteromonas atlantica
T6c]
Length = 115
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TAI F ++ + FF+ YE + S++ + +S+
Sbjct: 10 RDGVQDYVTVRATAIIMTAFTLYMLWFFLSTPTVTYEIWHELFSSLGMKVFTFAALVSVM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H+++G ++ DY+ L+
Sbjct: 70 LHIRIGFWQVLTDYVKSTALR 90
>gi|93004939|ref|YP_579376.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Psychrobacter cryohalolentis K5]
gi|92392617|gb|ABE73892.1| succinate dehydrogenase subunit D [Psychrobacter cryohalolentis
K5]
Length = 134
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ +I QR +A+ + + + FF+ +GD Y + + ++++ + + ++++
Sbjct: 16 SGSRDWIVQRISAVVLAVYSVVLLGFFLTHGDVSYTEWSNFMTSLPMRLFSLVAVLALAG 75
Query: 80 HMQLGMQVIIEDYI 93
H +GM + DYI
Sbjct: 76 HAWIGMWTVFTDYI 89
>gi|289209040|ref|YP_003461106.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. K90mix]
gi|288944671|gb|ADC72370.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. K90mix]
Length = 112
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 47/88 (53%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G G ++ QR TA+ F+I + +F+ + + V+V+++ AVA L + + +
Sbjct: 5 SGQGAWLLQRITAVYVGLFVILVLGYFLIAPPSDHAAWVAVIAHPAVALGSALFVVLLLL 64
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNS 107
H +G++ ++ DY+ L++ L + +
Sbjct: 65 HAWIGLRDVVLDYVKPLALRLTVLTLGA 92
>gi|26990884|ref|NP_746309.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida KT2440]
gi|148546900|ref|YP_001267002.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida F1]
gi|167034758|ref|YP_001669989.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida GB-1]
gi|170722679|ref|YP_001750367.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida W619]
gi|24985897|gb|AAN69773.1|AE016613_8 succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida KT2440]
gi|148510958|gb|ABQ77818.1| succinate dehydrogenase subunit D [Pseudomonas putida F1]
gi|166861246|gb|ABY99653.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida GB-1]
gi|169760682|gb|ACA73998.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida W619]
gi|313497962|gb|ADR59328.1| SdhD [Pseudomonas putida BIRD-1]
Length = 122
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F I + + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFLFLIGYVVAHPGIDYTQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIH-----YRLLKIMFLFMNSCFVLLLIIF 116
H +GM I DY+ I FLF C V + F
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSATAIRFLFQAVCGVAMFAYF 112
>gi|146310881|ref|YP_001175955.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Enterobacter sp. 638]
gi|145317757|gb|ABP59904.1| succinate dehydrogenase subunit D [Enterobacter sp. 638]
Length = 115
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ I FF G+ +E +
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMIGFFATSGELTWEIWSGFFGSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|68171572|ref|ZP_00544947.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Ehrlichia chaffeensis str. Sapulpa]
gi|88658456|ref|YP_507708.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Ehrlichia chaffeensis str. Arkansas]
gi|67999013|gb|EAM85689.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Ehrlichia chaffeensis str. Sapulpa]
gi|88599913|gb|ABD45382.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Ehrlichia chaffeensis str. Arkansas]
Length = 118
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 24 HFIKQRFTAIANIPFIIFF-------IAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
H++ QR TA IP ++F I+ +K + ++ +SN++ ++ L
Sbjct: 8 HWLIQRVTAFVLIPLSLWFLFKVLGVISIILK----SFPELHLSISNISNTDLIILLCFF 63
Query: 77 ISV--HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
IS H LG+QVI+EDYIH +L+ + V+L ++F F +L +LG
Sbjct: 64 ISAFYHAVLGVQVILEDYIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLG 117
>gi|259415142|ref|ZP_05739064.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter sp. TrichCH4B]
gi|259349052|gb|EEW60806.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter sp. TrichCH4B]
Length = 123
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 33 IANIPFIIFFIAFFIKYG---DAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVII 89
+++I + AF I +G YE++++ A I GL + +H+ QV +
Sbjct: 28 VSSILLVFLVPAFVITFGLGLGGTYEEVLAYYGRPVPAIITGLTLVVGIIHLMREAQVAV 87
Query: 90 EDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
EDY+H L + + L + F +I LF+L+K+A+
Sbjct: 88 EDYMH-GLAEKLTLIAVAAFSYTMIAAGLFALVKLAL 123
>gi|89073517|ref|ZP_01160040.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium sp. SKA34]
gi|89050781|gb|EAR56262.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium sp. SKA34]
Length = 115
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
SS+GR +G FI R TAI + ++ + FF + +E + S ++
Sbjct: 6 SSVGR--------NGIHDFILIRATAIILTLYTVYMVGFFAFGPELTFETWSAFFSQIST 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKI 100
L +SI VH +G+ ++ DYI +L++
Sbjct: 58 KVFTMLALVSILVHAWIGLWQVLTDYIKPAVLRV 91
>gi|253687627|ref|YP_003016817.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754205|gb|ACT12281.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 115
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G ++ R +AI + ++I+ I F GD YE I ++A+
Sbjct: 6 SALGR--------NGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYE-IWRGFFSMAL 56
Query: 67 ASIMGLGTI-SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ SI VH +GM ++ DYI L+ L + V+ L+++ ++
Sbjct: 57 TKVFTLLTLFSILVHAWIGMWQVLTDYIKPLALR---LTLQLAIVVALLVYVIY 107
>gi|326794792|ref|YP_004312612.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
gi|326545556|gb|ADZ90776.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
Length = 115
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA--VASIMGLGTI 75
+ G ++ QR +AI + +F I + + D YEQ + + S+M L +
Sbjct: 9 GRSGLYDWMMQRISAIVLALYSVFIIGYLVLNPDLTYEQWSGLFETTWMRIFSLMTL--L 66
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
SI +H +G+ + DYI + + FLF C
Sbjct: 67 SIGIHSWIGLWSVSTDYI--KATGVRFLFQAVC 97
>gi|226945048|ref|YP_002800121.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Azotobacter vinelandii DJ]
gi|226719975|gb|ACO79146.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Azotobacter vinelandii DJ]
Length = 122
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + + D Y + + S+ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVILAAYTLFLLGYLFFSSDLSYAEWHGLFSSTGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSC 108
SVH +GM I DY+ L + FLF +C
Sbjct: 69 SVHAWVGMWTISTDYLTPMALGKLATVVRFLFQAAC 104
>gi|11466548|ref|NP_044797.1| succinate:ubiquinone oxidoreductase subunit 4 [Reclinomonas
americana]
gi|1706431|sp|P80482|DHSD_RECAM RecName: Full=Succinate dehydrogenase membrane anchor subunit;
AltName: Full=Succinate dehydrogenase, subunit IV
gi|2258378|gb|AAD11912.1| succinate:ubiquinone oxidoreductase subunit 4 [Reclinomonas
americana]
Length = 120
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 18 AKDGTGHFIKQRFTAIANIP---FIIFFIAFFIKYGDAPYEQIVSVLSNV--AVASIMGL 72
K G+ H+ QRF AI P +++F +A +I P ++ L+ + + + +
Sbjct: 11 TKSGSMHWWLQRFLAILLAPIILYLLFDVAIYIGQQSDP--TVMMFLNRIFNHNSIFIFI 68
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFM 105
++ + H++ GM+VIIEDY+H +I+ +F+
Sbjct: 69 TSVILIWHVRGGMEVIIEDYVHGEKTRIVSIFL 101
>gi|261341309|ref|ZP_05969167.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cancerogenus ATCC 35316]
gi|288316613|gb|EFC55551.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cancerogenus ATCC 35316]
Length = 115
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ I FF G +E +
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWELWSGFFGSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|330813448|ref|YP_004357687.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486543|gb|AEA80948.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Pelagibacter sp. IMCC9063]
Length = 111
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
+I QR TA+ +P +I+F++ FI + ++ N S + + + H
Sbjct: 5 AVTKWILQRVTAVILLPLLIWFLSVFIGLVQKDFTTVIIFFENNINFSFSVVFLVLVFSH 64
Query: 81 MQLGMQVIIEDYIH 94
M++GM I EDYI
Sbjct: 65 MKIGMGEIFEDYIQ 78
>gi|50120297|ref|YP_049464.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium atrosepticum SCRI1043]
gi|49610823|emb|CAG74268.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pectobacterium atrosepticum SCRI1043]
Length = 115
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G ++ R +AI + ++I+ I F GD YE I +A+
Sbjct: 6 SALGR--------NGVHDWLLIRASAIVIVLYVIYLIGFIATAGDITYE-IWRGFFAMAL 56
Query: 67 ASIMGLGTI-SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ SI VH +GM ++ DYI L+ L + V+ L+++ ++
Sbjct: 57 TKVFTLLTLFSILVHAWIGMWQVLTDYIKPLALR---LTLQLAIVIALLVYVIY 107
>gi|73542010|ref|YP_296530.1| succinate dehydrogenase subunit D [Ralstonia eutropha JMP134]
gi|72119423|gb|AAZ61686.1| succinate dehydrogenase subunit D [Ralstonia eutropha JMP134]
Length = 121
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPF-IIFFIAFFIKYGDAPYEQIVSVLSNV 64
+++G R + A G ++ QR TA+ + F +I IAF + G A YE + SN
Sbjct: 3 NNNIGPKRLVVGAHYGLKDWLAQRVTAVIMVVFTVILAIAFLLSNG-ASYEAWAGLFSNQ 61
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYI 93
+ I L +S+ H +G++ I DY+
Sbjct: 62 WMKIITFLTILSLLYHAWIGVRDIWMDYV 90
>gi|52840773|ref|YP_094572.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627884|gb|AAU26625.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 115
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 40/80 (50%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
+G ++ QR TA+ ++IF F + D + Q + +N A +G +++++
Sbjct: 11 NGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLSFSQWHLLFTNKAFQIATTIGLMALTL 70
Query: 80 HMQLGMQVIIEDYIHYRLLK 99
H +G+ + DY+ +++
Sbjct: 71 HAWIGIWTVTTDYMKCTVIR 90
>gi|99078502|ref|YP_611760.1| succinate dehydrogenase subunit D [Ruegeria sp. TM1040]
gi|99035640|gb|ABF62498.1| succinate dehydrogenase subunit D [Ruegeria sp. TM1040]
Length = 123
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 33 IANIPFIIFFIAFFIKYG---DAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVII 89
+++I ++ AF I +G YE++++ A I GL + +H+ QV +
Sbjct: 28 VSSILLVVLVPAFVITFGLGLGGTYEEVLAYYGRPVPAIITGLTLVVGIIHLMREAQVAV 87
Query: 90 EDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
EDY+H L + + L + +I LF+L+K+A+
Sbjct: 88 EDYMH-GLAEKLTLIAVAALSYTMIAAGLFALVKLAL 123
>gi|294676289|ref|YP_003576904.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter capsulatus SB 1003]
gi|294475109|gb|ADE84497.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter capsulatus SB 1003]
Length = 133
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIA---NIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVA 67
R G G++ GT HF +++A +P IF I A Q+ + + A
Sbjct: 9 RAVGKGASGSGTEHFWWMTMSSVALAFLVPAFIFVFGHAIGMDQA---QLQAYFARPFPA 65
Query: 68 SIMGLGTISISVHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLFSLLKIA 125
+ L TI H G QV++EDY L K ++F++ S + L+++ L ++ +A
Sbjct: 66 ILTALVTIVGMRHFAKGAQVMLEDYTQGSLRKGLVIFVYSLSWLISALVLYALAKMMFLA 125
>gi|295096571|emb|CBK85661.1| succinate dehydrogenase subunit D [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 115
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ I FF G +E +
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWEIWSGFFGSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|54308238|ref|YP_129258.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum SS9]
gi|46912666|emb|CAG19456.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum SS9]
Length = 115
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++G FI R TAI + I+ + FF D +E + ++ L +SI
Sbjct: 9 GRNGIHDFILIRATAIILTLYTIYMVGFFAFGPDLSFETWTAFWGQLSTKVFTMLALVSI 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK 99
VH +G+ ++ DYI L+
Sbjct: 69 LVHAWIGLWQVLTDYIKCAALR 90
>gi|313106595|ref|ZP_07792822.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 39016]
gi|310879324|gb|EFQ37918.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 39016]
Length = 124
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 11 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 70
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSC 108
SVH +GM I DY+ L + FLF C
Sbjct: 71 SVHAWVGMWTISTDYLTSMALGKAATVVRFLFQAVC 106
>gi|54293524|ref|YP_125939.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Lens]
gi|53753356|emb|CAH14806.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Lens]
Length = 115
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
+G ++ QR TA+ ++IF F + D + Q + +N +G I++++
Sbjct: 11 NGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLNFSQWHLLFANKVFQIATTIGLIALTL 70
Query: 80 HMQLGMQVIIEDY-------IHYRLLKIMFLF 104
H +G+ + DY + +LL +++LF
Sbjct: 71 HAWIGIWTVTTDYMKCTVIRLSVQLLVVLWLF 102
>gi|296390044|ref|ZP_06879519.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas aeruginosa PAb1]
Length = 122
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLITHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSC 108
SVH +GM I DY+ L + FLF C
Sbjct: 69 SVHAWVGMWTISTDYLTSMALGKAATVVRFLFQAVC 104
>gi|113868592|ref|YP_727081.1| succinate dehydrogenase (hydrophobic anchor subunit) [Ralstonia
eutropha H16]
gi|33320237|gb|AAQ05855.1| SdhD protein [Cupriavidus necator]
gi|113527368|emb|CAJ93713.1| succinate dehydrogenase (hydrophobic anchor subunit) [Ralstonia
eutropha H16]
Length = 121
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPF-IIFFIAFFIKYGDAPYEQIVSVLSNVA 65
+++G R + A G ++ QR TA+ + F ++ IAF + G A YE + SN
Sbjct: 4 NNIGPKRLVVGAHYGLKDWLAQRVTAVIMVVFTVVLAIAFLLSNG-ASYEAWAGLFSNQW 62
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIH 94
+ I L +S+ H +G++ I DY+
Sbjct: 63 MKIITFLTILSLLYHAWIGVRDIWMDYVR 91
>gi|15596779|ref|NP_250273.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa PAO1]
gi|116049527|ref|YP_791669.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218892461|ref|YP_002441328.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa LESB58]
gi|254234683|ref|ZP_04928006.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa C3719]
gi|254239931|ref|ZP_04933253.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 2192]
gi|9947545|gb|AAG04971.1|AE004586_9 succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa PAO1]
gi|115584748|gb|ABJ10763.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166614|gb|EAZ52125.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa C3719]
gi|126193309|gb|EAZ57372.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 2192]
gi|218772687|emb|CAW28472.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa LESB58]
Length = 122
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSC 108
SVH +GM I DY+ L + FLF C
Sbjct: 69 SVHAWVGMWTISTDYLTSMALGKAATVVRFLFQAVC 104
>gi|330973470|gb|EGH73536.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 122
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPSRSYAQWHGLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C VL+ F
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATAVRFLFQAVCGVLMFAYF 112
>gi|296103349|ref|YP_003613495.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|29418060|gb|AAO39686.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae]
gi|295057808|gb|ADF62546.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 115
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +II+ I FF G +E +
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWEIWSGFFGSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYI 93
L SI +H +GM ++ DY+
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYV 84
>gi|330445466|ref|ZP_08309118.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489657|dbj|GAA03615.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 115
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
SS+GR +G FI R TAI + ++ + FF + +E + S ++
Sbjct: 6 SSVGR--------NGIHDFILIRATAIILTLYTVYMVGFFAFGPELTFETWSAFFSQIST 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLK 99
L +SI VH +G+ ++ DYI +L+
Sbjct: 58 KVFTMLALVSILVHAWIGLWQVLTDYIKPAVLR 90
>gi|194290223|ref|YP_002006130.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with sdhc [Cupriavidus taiwanensis LMG 19424]
gi|193224058|emb|CAQ70067.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Cupriavidus taiwanensis LMG 19424]
Length = 121
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPF-IIFFIAFFIKYGDAPYEQIVSVLSNV 64
+++G R + A G ++ QR TA+ + F +I IAF + G A YE + +N
Sbjct: 3 NNNIGPKRLVVGAHYGLKDWLAQRVTAVVMVVFTVILAIAFLLSNG-ASYEAWAGLFANQ 61
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYI 93
+ I L +S+ H +G++ I DY+
Sbjct: 62 WMKIITFLTILSLLYHAWIGVRDIWMDYV 90
>gi|290474114|ref|YP_003466991.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Xenorhabdus bovienii SS-2004]
gi|289173424|emb|CBJ80201.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Xenorhabdus bovienii SS-2004]
Length = 115
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR G ++ R +AI + ++++ + F D YE S S+
Sbjct: 6 SALGR--------TGIQDWLLLRASAIVIVLYVLYLVGFVATTSDITYEVWRSFFSSSLT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIH 94
L +SI VH +GM ++ DY+
Sbjct: 58 KVFTVLALLSILVHAWIGMWQVLTDYVK 85
>gi|157146671|ref|YP_001453990.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Citrobacter koseri ATCC BAA-895]
gi|157083876|gb|ABV13554.1| hypothetical protein CKO_02437 [Citrobacter koseri ATCC BAA-895]
Length = 115
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G FI R TAI +I++ + FF G+ ++ S+
Sbjct: 6 SALGR--------NGVHDFILVRATAIVLTLYIVYMVGFFAISGELTFDVWSGFFSSAFT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L SI +H +GM ++ DY+ L+ L + V+ L+++ ++
Sbjct: 58 KVFTLLALFSILIHAWIGMWQVLTDYVKPLALR---LVLQLAIVVALVVYVIY 107
>gi|227114760|ref|ZP_03828416.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
gi|227327542|ref|ZP_03831566.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 115
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G ++ R +AI + ++I+ I F GD YE I +A+
Sbjct: 6 SALGR--------NGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYE-IWRGFFAMAL 56
Query: 67 ASIMGLGTI-SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ SI VH +GM ++ DYI L+ L + V+ L+++ ++
Sbjct: 57 TKVFTLLTLFSILVHAWIGMWQVLTDYIKPLALR---LTLQLAIVVALLVYVIY 107
>gi|261822346|ref|YP_003260452.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium wasabiae WPP163]
gi|261606359|gb|ACX88845.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium wasabiae WPP163]
Length = 115
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR +G ++ R +AI + ++I+ I F GD YE I +A+
Sbjct: 6 SALGR--------NGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYE-IWRGFFAMAL 56
Query: 67 ASIMGLGTI-SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ L T+ SI VH +GM ++ DYI L+ L + V+ L+++ ++
Sbjct: 57 TKVFTLLTLFSILVHAWIGMWQVLTDYIKPLALR---LTLQLAIVVALLVYVIY 107
>gi|49077572|gb|AAT49694.1| PA1582 [synthetic construct]
Length = 123
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYI 93
SVH +GM I DY+
Sbjct: 69 SVHAWVGMWTISTDYL 84
>gi|152984268|ref|YP_001349046.1| succinate dehydrogenase subunit D [Pseudomonas aeruginosa PA7]
gi|150959426|gb|ABR81451.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas aeruginosa PA7]
Length = 124
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 11 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 70
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSC 108
SVH +GM I DY+ L + FLF C
Sbjct: 71 SVHAWVGMWTISTDYLTPMALGKAATVVRFLFQAVC 106
>gi|145537153|ref|XP_001454293.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422048|emb|CAK86896.1| unnamed protein product [Paramecium tetraurelia]
Length = 1560
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 24 HFIKQR----FTAIANIPFIIFFIAFFIKYGDAPYEQIV--SVLSNVAVASIMGLGTISI 77
HFI Q F I +IP I F + + Y +V + ++NVA S L T S
Sbjct: 479 HFILQNLLIVFQMIPSIPLSIVLDPFIVNLQEKTYPSLVVFNFIANVANNS--NLTTKSQ 536
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFM 105
M L ++ I D +HYR+ +FL M
Sbjct: 537 IQIMDLLSKIAIYDTLHYRIASQIFLQM 564
>gi|300722383|ref|YP_003711669.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Xenorhabdus nematophila ATCC 19061]
gi|297628886|emb|CBJ89469.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Xenorhabdus nematophila ATCC 19061]
Length = 115
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
S+LGR G ++ R +AI + ++++ + F D YE S S+
Sbjct: 6 SALGR--------TGIQDWLLLRASAIIIVLYVLYLVGFVATTSDMTYEVWRSFFSSSLT 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIH 94
L ISI VH +GM ++ DY+
Sbjct: 58 KVFTVLTLISILVHAWIGMWQVLTDYVK 85
>gi|260576580|ref|ZP_05844568.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter sp. SW2]
gi|259021184|gb|EEW24492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter sp. SW2]
Length = 123
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 14 GMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG 73
G GSA GT T+I + F+ F + P+E +V+ A + GL
Sbjct: 12 GKGSAHSGTHEHKDMALTSIGLAFLMPTFLFIFGRTLGQPHEVVVATFGRPIPAIVTGLM 71
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
HM G+ ++ DY +++ +F+N+ L+ L++L+++A
Sbjct: 72 VFLAMRHMMHGVGSVLADYTRGTARRLLTIFVNA-LAYLITAAVLYALIRMA 122
>gi|261856936|ref|YP_003264219.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Halothiobacillus neapolitanus c2]
gi|261837405|gb|ACX97172.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Halothiobacillus neapolitanus c2]
Length = 116
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R A+ G ++ QR TA+ + + +F + + + + + + ++ V +
Sbjct: 4 RVPSGARYGIKDWLVQRLTAVVMVIYTLFITGYLLWHPVSNFADWQMMFHSLPVRLFSLI 63
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+S+ VH LGM+ I DYIH L++ L +++ +L L+ + +++
Sbjct: 64 FLLSLFVHAWLGMRDIFMDYIHPTLIR---LGLHALVILALVAYTAWAV 109
>gi|28869398|ref|NP_792017.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|71734632|ref|YP_274201.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|213968187|ref|ZP_03396332.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato T1]
gi|237803490|ref|ZP_04591075.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|257485478|ref|ZP_05639519.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289624404|ref|ZP_06457358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289646682|ref|ZP_06478025.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|301383808|ref|ZP_07232226.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato Max13]
gi|302059586|ref|ZP_07251127.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato K40]
gi|302133375|ref|ZP_07259365.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852639|gb|AAO55712.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|71555185|gb|AAZ34396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|213927167|gb|EEB60717.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato T1]
gi|320324893|gb|EFW80965.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329259|gb|EFW85256.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330867442|gb|EGH02151.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330875699|gb|EGH09848.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
gi|330880845|gb|EGH14994.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330888151|gb|EGH20812.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330967013|gb|EGH67273.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330987438|gb|EGH85541.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010659|gb|EGH90715.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331018600|gb|EGH98656.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. lachrymans str. M302278PT]
gi|331025472|gb|EGI05528.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 122
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHDLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C VL+ F
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATAVRFLFQAVCGVLMFAYF 112
>gi|11467130|ref|NP_054431.1| succinate dehydrogenase subunit 4 [Marchantia polymorpha]
gi|262186732|ref|YP_003275991.1| succinate dehydrogenase subunit 4 [Pleurozia purpurea]
gi|586765|sp|P38460|YMF17_MARPO RecName: Full=Uncharacterized mitochondrial protein ymf17; AltName:
Full=ORF86A
gi|786215|gb|AAC09428.1| ORF86a [Marchantia polymorpha]
gi|237780729|gb|ACR19375.1| succinate dehydrogenase subunit 4 [Pleurozia purpurea]
Length = 86
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 30/104 (28%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
M + ++ GH++ QR TA IP I+ +A S + L
Sbjct: 1 MKTHRETLGHWLLQRITAAFLIPTIL-----------------------IANVSTLILLN 37
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I + H+ +G++ I+ DY+H+ + + + ++LL +FCL
Sbjct: 38 ILLFWHIHVGIEEILADYVHHEVTR-------NWILILLRVFCL 74
>gi|66045246|ref|YP_235087.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae B728a]
gi|289679939|ref|ZP_06500829.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae FF5]
gi|302187423|ref|ZP_07264096.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae 642]
gi|63255953|gb|AAY37049.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae B728a]
gi|330899181|gb|EGH30600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. japonica str. M301072PT]
gi|330940368|gb|EGH43473.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330951680|gb|EGH51940.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae Cit 7]
gi|330980728|gb|EGH78831.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 122
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHGLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C VL+ F
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATAVRFLFQAVCGVLMFAYF 112
>gi|38638303|ref|NP_943706.1| succinate:cytochrome c oxidoreductase subunit 4 [Chara vulgaris]
gi|32966617|gb|AAP92200.1| succinate:cytochrome c oxidoreductase subunit 4 [Chara vulgaris]
Length = 92
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 27/107 (25%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
M + ++ H++ QR TA IP I+ L+NV S + L
Sbjct: 1 MKANRERLAHWLLQRITAAFLIPTIL--------------------LANV---STLILLN 37
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI----IFC 117
I + HM +G++ I+ DYIH+ + + FVL++I +FC
Sbjct: 38 ILLFWHMHVGIEEILADYIHHEVTRNFICLFLRVFVLIIIKYVFVFC 84
>gi|66816323|ref|XP_642171.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
gi|60470271|gb|EAL68251.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
Length = 179
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLK 99
+N+A+ S + LG IS+ H+ LGM+ +I DYI+ L+
Sbjct: 107 TNLALVSDIALG-ISLPAHLYLGMEAVINDYIYRPALR 143
>gi|90580051|ref|ZP_01235859.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Vibrio angustum S14]
gi|90438936|gb|EAS64119.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Vibrio angustum S14]
Length = 115
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
SS+GR +G FI R TAI + ++ + FF + +E + ++
Sbjct: 6 SSVGR--------NGIHDFILIRATAIILTLYTVYMVGFFAFGSELTFETWSVFFNQIST 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKI 100
L +SI VH +G+ ++ DYI +L++
Sbjct: 58 KVFTMLALVSILVHAWIGLWQVLTDYIKPAVLRV 91
>gi|119945915|ref|YP_943595.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Psychromonas ingrahamii 37]
gi|119864519|gb|ABM03996.1| succinate dehydrogenase subunit D [Psychromonas ingrahamii 37]
Length = 114
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F + + D Y V S I++
Sbjct: 10 RNGVHDYVLTRASAIIILAYVLYLVGF-VTFADIDYFTWVDFFSLTLTKVFTLFALIAML 68
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFV 110
VH +G+ ++ DY+ LL+ + FL ++ FV
Sbjct: 69 VHSWIGLWQVLTDYVKNALLRAALQFLLTSTAFV 102
>gi|330959059|gb|EGH59319.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 122
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHDLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLK-----IMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C VL+ F
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATVVRFLFQAVCGVLMFAYF 112
>gi|90416068|ref|ZP_01224001.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2207]
gi|90332442|gb|EAS47639.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2207]
Length = 122
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+SLGR G ++ R +A ++IF + + + + Y ++ S++ +
Sbjct: 6 TSLGR--------SGLSDWLIARVSAYVMSAYLIFIVGYLMLTPELNYADWAALNSSLPM 57
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLL 98
L +SI+ H +GM ++ DY+ RL+
Sbjct: 58 RMFSLLTILSIAAHAWIGMWCVLTDYVTVRLI 89
>gi|149911924|ref|ZP_01900523.1| hypothetical succinate dehydrogenase, hydrophobic subunit
[Moritella sp. PE36]
gi|149805017|gb|EDM65045.1| hypothetical succinate dehydrogenase, hydrophobic subunit
[Moritella sp. PE36]
Length = 114
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ GT FI R TAI + +F+ F+ + D Y+ ++ L I+I
Sbjct: 10 RSGTHDFIMIRATAIIMALYTFYFVG-FVAFNDLTYQVWSDFFASTGNKVFTLLTLIAIV 68
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCL 118
+H +G+ ++ DY+ L+ + F+ + F+ L+ F +
Sbjct: 69 IHAWIGVWQVLTDYVKSTGLRGALQFILTTTAFIYALVGFVV 110
>gi|332306146|ref|YP_004433997.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173475|gb|AEE22729.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 115
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TAI F ++ FF+ YE + S++ + +S+
Sbjct: 10 RDGVQDYVTVRATAIIMTVFSLYMAWFFLSTETVTYEIWRGLFSSLGMKVFTFAALVSVM 69
Query: 79 VHMQLGMQVIIEDYIH 94
+H+++G ++ DY+
Sbjct: 70 LHIRIGFWQVLTDYVK 85
>gi|70729105|ref|YP_258841.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens Pf-5]
gi|68343404|gb|AAY91010.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens Pf-5]
Length = 122
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + Y Q + +N + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLVANPGIDYTQWHGLFANNWMRIFSLLAMVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL-----KIMFLFMNSCFVLLLIIF 116
H +GM I DY+ L + FLF C V + F
Sbjct: 69 GAHAWVGMWTISTDYLTPMALGKSATAVRFLFQAVCGVAMFAYF 112
Searching..................................................done
Results from round 2
>gi|148559156|ref|YP_001259727.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ovis ATCC 25840]
gi|161619820|ref|YP_001593707.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella canis ATCC 23365]
gi|163843926|ref|YP_001628330.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis ATCC 23445]
gi|225628103|ref|ZP_03786138.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti str. Cudo]
gi|225853340|ref|YP_002733573.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis ATCC 23457]
gi|254704917|ref|ZP_05166745.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis bv. 3 str. 686]
gi|254707569|ref|ZP_05169397.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis M163/99/10]
gi|254708894|ref|ZP_05170705.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis B2/94]
gi|254717970|ref|ZP_05179781.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. 83/13]
gi|256030420|ref|ZP_05444034.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella pinnipedialis M292/94/1]
gi|256045511|ref|ZP_05448394.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. Rev.1]
gi|256059879|ref|ZP_05450066.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella neotomae 5K33]
gi|256112238|ref|ZP_05453159.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis bv. 3 str. Ether]
gi|256158404|ref|ZP_05456302.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M490/95/1]
gi|256253824|ref|ZP_05459360.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti B1/94]
gi|256263173|ref|ZP_05465705.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|256370305|ref|YP_003107816.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella microti CCM 4915]
gi|260169331|ref|ZP_05756142.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella sp. F5/99]
gi|260567608|ref|ZP_05838078.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261220958|ref|ZP_05935239.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
B1/94]
gi|261315054|ref|ZP_05954251.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M163/99/10]
gi|261316389|ref|ZP_05955586.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis B2/94]
gi|261323850|ref|ZP_05963047.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
neotomae 5K33]
gi|261755613|ref|ZP_05999322.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 3 str. 686]
gi|261758846|ref|ZP_06002555.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|265982913|ref|ZP_06095648.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella sp.
83/13]
gi|265987462|ref|ZP_06100019.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M292/94/1]
gi|265991934|ref|ZP_06104491.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 1 str. Rev.1]
gi|265993666|ref|ZP_06106223.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 3 str. Ether]
gi|265996917|ref|ZP_06109474.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M490/95/1]
gi|294851144|ref|ZP_06791817.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella sp. NVSL 07-0026]
gi|306838922|ref|ZP_07471749.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. NF 2653]
gi|306842943|ref|ZP_07475577.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO2]
gi|306843358|ref|ZP_07475959.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO1]
gi|148370413|gb|ABQ60392.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ovis ATCC 25840]
gi|161336631|gb|ABX62936.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella canis ATCC 23365]
gi|163674649|gb|ABY38760.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis ATCC 23445]
gi|225616928|gb|EEH13975.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti str. Cudo]
gi|225641705|gb|ACO01619.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis ATCC 23457]
gi|256000468|gb|ACU48867.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella microti CCM 4915]
gi|260157126|gb|EEW92206.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260919542|gb|EEX86195.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
B1/94]
gi|261295612|gb|EEX99108.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis B2/94]
gi|261299830|gb|EEY03327.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
neotomae 5K33]
gi|261304080|gb|EEY07577.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M163/99/10]
gi|261738830|gb|EEY26826.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|261745366|gb|EEY33292.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 3 str. 686]
gi|262551385|gb|EEZ07375.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M490/95/1]
gi|262764647|gb|EEZ10568.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 3 str. Ether]
gi|263003000|gb|EEZ15293.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
melitensis bv. 1 str. Rev.1]
gi|263093079|gb|EEZ17229.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|264659659|gb|EEZ29920.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
pinnipedialis M292/94/1]
gi|264661505|gb|EEZ31766.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella sp.
83/13]
gi|294819733|gb|EFG36732.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella sp. NVSL 07-0026]
gi|306276049|gb|EFM57749.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO1]
gi|306286871|gb|EFM58396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. BO2]
gi|306405992|gb|EFM62244.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella sp. NF 2653]
gi|326409904|gb|ADZ66969.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis M28]
gi|326539617|gb|ADZ87832.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella melitensis M5-90]
Length = 131
Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 88/128 (68%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|23502754|ref|NP_698881.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis 1330]
gi|23348772|gb|AAN30796.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Brucella suis 1330]
Length = 131
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L + HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLMGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|254713681|ref|ZP_05175492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M644/93/1]
gi|254715968|ref|ZP_05177779.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella ceti M13/05/1]
gi|261217732|ref|ZP_05932013.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M13/05/1]
gi|261321420|ref|ZP_05960617.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M644/93/1]
gi|260922821|gb|EEX89389.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M13/05/1]
gi|261294110|gb|EEX97606.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella ceti
M644/93/1]
Length = 131
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++++
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVLAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|254700547|ref|ZP_05162375.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella suis bv. 5 str. 513]
gi|261751051|ref|ZP_05994760.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 5 str. 513]
gi|261740804|gb|EEY28730.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella suis
bv. 5 str. 513]
Length = 131
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 88/128 (68%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVWAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|260562820|ref|ZP_05833306.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260152836|gb|EEW87928.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
Length = 131
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 56/128 (43%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+SLG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTSLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|153008287|ref|YP_001369502.1| succinate dehydrogenase hydrophobic membrane anchor [Ochrobactrum
anthropi ATCC 49188]
gi|151560175|gb|ABS13673.1| Succinate dehydrogenase hydrophobic membrane anchor [Ochrobactrum
anthropi ATCC 49188]
Length = 131
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 86/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GTGHF QR +A A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRTPLGKVRGLGSAKEGTGHFWYQRLSAAALVPLVMFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +K++ + +N+ F ++ C+F+
Sbjct: 64 LSHPFTAIVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKVVLVMLNTFFTAVVGFACIFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|17986444|ref|NP_539078.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. 16M]
gi|17982040|gb|AAL51342.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella melitensis bv. 1 str. 16M]
Length = 128
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/128 (43%), Positives = 89/128 (69%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+SLG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 1 MNNDMRTSLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 61 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 120
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 121 ILKLSFGG 128
>gi|62290759|ref|YP_222552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus bv. 1 str. 9-941]
gi|82700670|ref|YP_415244.1| hypothetical protein BAB1_1902 [Brucella melitensis biovar Abortus
2308]
gi|189024972|ref|YP_001935740.1| succinate dehydrogenase [Brucella abortus S19]
gi|237816265|ref|ZP_04595258.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus str. 2308 A]
gi|254690048|ref|ZP_05153302.1| succinate dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|254694536|ref|ZP_05156364.1| succinate dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|254696161|ref|ZP_05157989.1| succinate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|254731079|ref|ZP_05189657.1| succinate dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|256258301|ref|ZP_05463837.1| succinate dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|260546024|ref|ZP_05821764.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260755582|ref|ZP_05867930.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 6 str. 870]
gi|260758808|ref|ZP_05871156.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 4 str. 292]
gi|260760532|ref|ZP_05872875.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 2 str. 86/8/59]
gi|260884608|ref|ZP_05896222.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 9 str. C68]
gi|261214855|ref|ZP_05929136.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 3 str. Tulya]
gi|297247146|ref|ZP_06930864.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella abortus bv. 5 str. B3196]
gi|62196891|gb|AAX75191.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus bv. 1 str. 9-941]
gi|82616771|emb|CAJ11858.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
gi|189020544|gb|ACD73266.1| succinate dehydrogenase [Brucella abortus S19]
gi|237788332|gb|EEP62547.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brucella abortus str. 2308 A]
gi|260096131|gb|EEW80007.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260669126|gb|EEX56066.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 4 str. 292]
gi|260670964|gb|EEX57785.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 2 str. 86/8/59]
gi|260675690|gb|EEX62511.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 6 str. 870]
gi|260874136|gb|EEX81205.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 9 str. C68]
gi|260916462|gb|EEX83323.1| succinate dehydrogenase hydrophobic membrane anchor [Brucella
abortus bv. 3 str. Tulya]
gi|297174315|gb|EFH33662.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Brucella abortus bv. 5 str. B3196]
Length = 131
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR LG+VRG+GSAK+GT HF QR +A+A +P ++FFI I A Y ++ +
Sbjct: 4 MNNDMRIPLGKVRGLGSAKEGTSHFWYQRLSAVALVPLVLFFIGLVISLNGASYAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +KI+ + +N+ F +++ + C+F+
Sbjct: 64 LSHPFTAVVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKIVLVMLNTFFTVVVGLACVFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|239833034|ref|ZP_04681363.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ochrobactrum intermedium LMG 3301]
gi|239825301|gb|EEQ96869.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ochrobactrum intermedium LMG 3301]
Length = 131
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 87/128 (67%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ DMR+ LG+VRG+GSAK+GTGHF QR +A+A +P ++FFI + A + ++ +
Sbjct: 4 MNKDMRTPLGKVRGLGSAKEGTGHFWYQRLSAVALVPLVMFFIGLVVSLNGASFAEVRAA 63
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ A +M L ++ HM+LGMQVIIEDY+H +K++ + +NS F ++ C+F+
Sbjct: 64 LSHPFTAIVMALFVLTGVYHMRLGMQVIIEDYVHGEGMKVVLVMLNSFFTAVVGFACIFA 123
Query: 121 LLKIAILG 128
+LK++ G
Sbjct: 124 ILKLSFGG 131
>gi|325294013|ref|YP_004279877.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
sp. H13-3]
gi|325061866|gb|ADY65557.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
sp. H13-3]
Length = 126
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 68/125 (54%), Positives = 94/125 (75%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+AN+P +IFF+ F IKY APY ++ + LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVANVPLLIFFVVFLIKYAGAPYPEVAAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL +S +HM+LGMQVIIEDY+H + K++ L +N+ F +L+ C+F++LK
Sbjct: 62 PLVAVIMGLVLVSGLIHMKLGMQVIIEDYVHGEVSKLVLLMLNTFFAVLIGGLCIFAILK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|209551263|ref|YP_002283180.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537019|gb|ACI56954.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 126
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 71/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|116254177|ref|YP_770015.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|115258825|emb|CAK09931.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 126
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F + Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFVFFMLAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H K+ L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKVALLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|319780754|ref|YP_004140230.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166642|gb|ADV10180.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 131
Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 88/127 (69%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ DMR+ L RVRG+GSA++GTGHF +QR TAIANIP I+FF+ F I A +E + + L
Sbjct: 5 NTDMRTPLARVRGLGSAREGTGHFWRQRLTAIANIPLILFFVGFLIALNGADHEHVRAAL 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+N VA +M L IS HM++GMQVIIEDY+H +K+ + +N+ F + + + +F+L
Sbjct: 65 ANPFVALVMALVLISGLTHMRIGMQVIIEDYVHGEGMKLALIALNTFFTIAVGVASIFAL 124
Query: 122 LKIAILG 128
LK+A G
Sbjct: 125 LKLAFGG 131
>gi|241206663|ref|YP_002977759.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860553|gb|ACS58220.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 126
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 70/125 (56%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TA+AN+P I+FF+ F + Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFVFFMLAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI+ L +N+ F +L+ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIVLLMLNTFFAILIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|328541810|ref|YP_004301919.1| Succinate dehydrogenase, hydrophobic membrane anchor protein
[polymorphum gilvum SL003B-26A1]
gi|326411562|gb|ADZ68625.1| Succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Polymorphum gilvum SL003B-26A1]
Length = 127
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 79/125 (63%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I A Y+++ + L N
Sbjct: 3 DMRTPLAKVRGLGSAKDGTEHFWRQRVTAVANVFLISFFVITLISLQGAGYDEVRTCLGN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +M L S HM+LGMQVIIEDY+H +K + L N+ F + + +F++LK
Sbjct: 63 PIVAILMLLVIASGVYHMKLGMQVIIEDYVHGDGVKFLALMANTFFCAFIGLGSVFAVLK 122
Query: 124 IAILG 128
+ G
Sbjct: 123 LGFGG 127
>gi|86359477|ref|YP_471369.1| succinate dehydrogenase subunit D, membrane anchor protein
[Rhizobium etli CFN 42]
gi|86283579|gb|ABC92642.1| succinate dehydrogenase subunit D, membrane anchor protein
[Rhizobium etli CFN 42]
Length = 126
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLFS+LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIASLCLFSILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|218671677|ref|ZP_03521346.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli GR56]
Length = 126
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/125 (56%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+ANIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVANIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|190893745|ref|YP_001980287.1| succinate dehydrogenase, membrane anchor subunit [Rhizobium etli
CIAT 652]
gi|218515348|ref|ZP_03512188.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli 8C-3]
gi|190699024|gb|ACE93109.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli CIAT 652]
Length = 126
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|118590534|ref|ZP_01547936.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Stappia aggregata IAM 12614]
gi|118436997|gb|EAV43636.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Stappia aggregata IAM 12614]
Length = 127
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 78/125 (62%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAK+GT HF KQR TA+AN+ I FF+ I + + +V L N
Sbjct: 3 DMRTPLNKVRGLGSAKEGTDHFWKQRLTAVANVFLISFFVILVIAMQGSTHADVVETLKN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ I+ L +S HM+LGMQVIIEDY+H +K + L N+ F + C+F++LK
Sbjct: 63 PLVSIILLLVILSGVYHMKLGMQVIIEDYVHGEGIKFLTLMANTFFCAFIGFGCVFAVLK 122
Query: 124 IAILG 128
I G
Sbjct: 123 IGFGG 127
>gi|227823651|ref|YP_002827624.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Sinorhizobium fredii NGR234]
gi|227342653|gb|ACP26871.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Sinorhizobium fredii NGR234]
Length = 126
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 64/125 (51%), Positives = 90/125 (72%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA++N+P + FF+ F +Y AP+ ++V+ L+N
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVSNLPLLTFFVFFVARYAGAPHAEVVAALAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IM L IS VHM++GMQVIIEDY+H +KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVIMALVVISALVHMRIGMQVIIEDYVHAEGVKIALLMLNTFFAIAIGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|15966824|ref|NP_387177.1| succinate dehydrogenase membrane anchor subunit protein
[Sinorhizobium meliloti 1021]
gi|307301652|ref|ZP_07581411.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti BL225C]
gi|307316324|ref|ZP_07595768.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti AK83]
gi|15076096|emb|CAC47650.1| Probable succinate dehydrogenase membrane anchor subunit
[Sinorhizobium meliloti 1021]
gi|306898164|gb|EFN28906.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti AK83]
gi|306903350|gb|EFN33939.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sinorhizobium meliloti BL225C]
Length = 126
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 88/125 (70%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MR+ LG+VRG+GSAK+GT HF +QR TA+A+IP IFF+ F Y AP+ ++++ LSN
Sbjct: 2 NMRTPLGKVRGLGSAKEGTDHFWRQRLTAVASIPLTIFFVVFLAHYAGAPHAELIAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA MGL ++ VHM++GMQVIIEDY+H KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVTMGLMVVAGLVHMKIGMQVIIEDYVHGEGAKIALLMLNTFFTIAVGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|254503995|ref|ZP_05116146.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Labrenzia alexandrii DFL-11]
gi|222440066|gb|EEE46745.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Labrenzia alexandrii DFL-11]
Length = 127
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 58/125 (46%), Positives = 79/125 (63%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+V G+GSAKDGT HF KQR TA+AN+ I FF+ I + + +V L N
Sbjct: 3 DMRTPLGKVLGLGSAKDGTDHFWKQRLTAVANVFLISFFVILVISMQGSSHGDVVETLQN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ I+ L +S HM+LGMQVIIEDYIH LK + + N+ F + + C+F++LK
Sbjct: 63 PLVSIILLLVILSGVYHMKLGMQVIIEDYIHGEALKFLTVMANTFFCVFIGFGCIFAVLK 122
Query: 124 IAILG 128
I G
Sbjct: 123 IGFGG 127
>gi|218462021|ref|ZP_03502112.1| succinate dehydrogenase protein, membrane anchor subunit [Rhizobium
etli Kim 5]
Length = 123
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 67/123 (54%), Positives = 89/123 (72%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
R+ LG+VRG+GSAK+GT HF +QR TA++NIP I+FF+ F I Y APY +V LSN
Sbjct: 1 RTPLGKVRGLGSAKEGTSHFWRQRLTAVSNIPLILFFVIFMIAYAGAPYADVVRALSNPF 60
Query: 66 VASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+ F +++ CLF++LKIA
Sbjct: 61 VAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAIVIAGLCLFAILKIA 120
Query: 126 ILG 128
+G
Sbjct: 121 FVG 123
>gi|110635574|ref|YP_675782.1| succinate dehydrogenase subunit D [Mesorhizobium sp. BNC1]
gi|110286558|gb|ABG64617.1| succinate dehydrogenase subunit D [Chelativorans sp. BNC1]
Length = 127
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/125 (48%), Positives = 85/125 (68%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSA+ GT HF +QR TA++NIP IIFFI F Y + YE+I + L+
Sbjct: 3 DMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAALAQ 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A +MGL +S+ HM+LGMQVIIEDY+H KI + +N+ F +++ L+SLL+
Sbjct: 63 PVSALLMGLAFVSVLYHMRLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSLLR 122
Query: 124 IAILG 128
IA G
Sbjct: 123 IAFGG 127
>gi|307942784|ref|ZP_07658129.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseibium sp. TrichSKD4]
gi|307773580|gb|EFO32796.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseibium sp. TrichSKD4]
Length = 127
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 81/126 (64%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I + YE +++ L
Sbjct: 2 KDMRTPLAKVRGLGSAKDGTEHFWRQRVTAVANVFLISFFVILVISMQGSSYEDMIATLQ 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
N VA +M + +S HM+LGMQVIIEDYIH +K++ + N+ F L+ +F++L
Sbjct: 62 NPLVAILMLMVILSGVYHMKLGMQVIIEDYIHSEGVKVLAVLGNTFFSALIGFGTVFAVL 121
Query: 123 KIAILG 128
KI G
Sbjct: 122 KIGFGG 127
>gi|13473608|ref|NP_105176.1| succinate dehydrogenase cytochrome b small subunit [Mesorhizobium
loti MAFF303099]
gi|14024358|dbj|BAB50962.1| succinate dehydrogenase cytochrome b small subunit [Mesorhizobium
loti MAFF303099]
Length = 132
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 59/127 (46%), Positives = 85/127 (66%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
DMR+ L +VRG+GSA++GTGHF +QR TAIANIP +FF+ F I A Y ++ + L
Sbjct: 6 STDMRTPLAKVRGLGSAREGTGHFWRQRLTAIANIPLTLFFVGFLIALNGAGYAEVRAAL 65
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+N V ++ L IS +HM+LGMQVIIEDYI LK+ + +N+ F + + + +F+L
Sbjct: 66 ANPFVGLMLALVLISGLIHMRLGMQVIIEDYITSEGLKLATIALNTFFTVAVGVASIFAL 125
Query: 122 LKIAILG 128
LK+A G
Sbjct: 126 LKLAFGG 132
>gi|15889900|ref|NP_355581.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
tumefaciens str. C58]
gi|15157851|gb|AAK88366.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
tumefaciens str. C58]
Length = 126
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 67/125 (53%), Positives = 94/125 (75%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF++QR TA+AN+P +IFF+ F IKY APY ++V+ LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFLRQRVTAVANVPLLIFFVIFLIKYAGAPYPEVVAALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IM L +S +HM+LGMQVIIEDY+H + K++ L +N+ F +L+ +F++LK
Sbjct: 62 PLVAVIMALVLVSGLIHMKLGMQVIIEDYVHAEVSKLVLLMLNTFFAILIGGLSIFAILK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|240851319|ref|YP_002972722.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella grahamii as4aup]
gi|240268442|gb|ACS52030.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella grahamii as4aup]
Length = 128
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF QR T + N+P +IFFI + Y + +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLQRLTGLVNLPLLIFFIVLILSLVGKDYSIVRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T S+ HM+LGMQV+IEDYI +I FL +N F L+ +FS
Sbjct: 61 LAHPVVAILMGLMTFSVLYHMKLGMQVVIEDYIPREGFRIFFLTLNISFCFLIGGVIIFS 120
Query: 121 LLKIAILG 128
LLKIA+ G
Sbjct: 121 LLKIALGG 128
>gi|150398155|ref|YP_001328622.1| succinate dehydrogenase hydrophobic membrane anchor [Sinorhizobium
medicae WSM419]
gi|150029670|gb|ABR61787.1| Succinate dehydrogenase hydrophobic membrane anchor [Sinorhizobium
medicae WSM419]
Length = 126
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/125 (49%), Positives = 87/125 (69%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ LG+VRG+GSAK+GT HF +QR TA+A+IP IFF+ F Y AP+ ++++ L+N
Sbjct: 2 SMRTPLGKVRGLGSAKEGTDHFWRQRVTAVASIPLTIFFVVFLAHYAGAPHAELLAALAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA MGL ++ VHM++GMQVIIEDY+H KI L +N+ F + + CLF++LK
Sbjct: 62 PFVAVTMGLMVVAGLVHMKIGMQVIIEDYVHGEGAKIALLMLNTFFTIAVGGLCLFAVLK 121
Query: 124 IAILG 128
IA G
Sbjct: 122 IAFAG 126
>gi|222150047|ref|YP_002551004.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
vitis S4]
gi|221737029|gb|ACM37992.1| succinate dehydrogenase hydrophobic membrane anchor [Agrobacterium
vitis S4]
Length = 126
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/125 (53%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAKDGT HF +QR TAIAN+P ++FFI F + + APY +VS LSN
Sbjct: 2 DMRTPLGKVRGLGSAKDGTEHFWRQRLTAIANVPLMLFFIIFMLTHAGAPYADVVSALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL +S +HM++GMQ II DYIH ++K+ + +N+ FV++ CLF++LK
Sbjct: 62 PLVAVIMGLVVLSGLIHMKIGMQEIIADYIHNEVMKMGLMMLNTFFVVITGALCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|222087468|ref|YP_002546005.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Agrobacterium radiobacter K84]
gi|221724916|gb|ACM28072.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Agrobacterium radiobacter K84]
Length = 126
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/125 (56%), Positives = 92/125 (73%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ LG+VRG+GSAK+GT HF +QR TA+AN+P IFF+ F I Y APY ++V LSN
Sbjct: 2 DMRTPLGKVRGLGSAKEGTDHFWRQRLTAVANVPLFIFFVIFLIIYAGAPYAEVVHALSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA IMGL IS +HM+LGMQVIIEDY+H KI+ L +N+ F +++ CLF++LK
Sbjct: 62 PFVAVIMGLMVISGIIHMKLGMQVIIEDYVHGEFGKIVLLMLNTFFSIVMAGLCLFAILK 121
Query: 124 IAILG 128
IA +G
Sbjct: 122 IAFVG 126
>gi|260464203|ref|ZP_05812396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium opportunistum WSM2075]
gi|259030006|gb|EEW31289.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium opportunistum WSM2075]
Length = 131
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/127 (45%), Positives = 88/127 (69%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
DMR+ L RVRG+GSA++GTGHF +QR TAIANIP I+FF+ F I A + ++ + L
Sbjct: 5 KTDMRTPLARVRGLGSAREGTGHFWRQRLTAIANIPLILFFVGFLIALNGAGFAEVRAAL 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+N VA ++ L +S +HM++GMQVIIEDY+H +K+ + +N+ F + + + +F+L
Sbjct: 65 ANPFVALVVALVLVSGLIHMRIGMQVIIEDYVHGEGMKLALIALNTFFTVAVGVTSIFAL 124
Query: 122 LKIAILG 128
LK+A G
Sbjct: 125 LKLAFGG 131
>gi|49476234|ref|YP_034275.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella henselae str. Houston-1]
gi|49239042|emb|CAF28342.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella henselae str. Houston-1]
Length = 128
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/128 (47%), Positives = 81/128 (63%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF QR T N+P +IFFI + Y I +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLQRLTGFINLPLLIFFIVLILSLVGKDYSIIRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T+S+ HM+LGMQV+IEDYI L+I+FL +N F +L +F+
Sbjct: 61 LAHPVVAVLMGLLTLSVLYHMKLGMQVVIEDYIPREGLRIIFLVLNILFCFVLGGIIVFA 120
Query: 121 LLKIAILG 128
LLKIAI G
Sbjct: 121 LLKIAIGG 128
>gi|163761420|ref|ZP_02168494.1| probable succinate dehydrogenase membrane anchor subunit protein
[Hoeflea phototrophica DFL-43]
gi|162281415|gb|EDQ31712.1| probable succinate dehydrogenase membrane anchor subunit protein
[Hoeflea phototrophica DFL-43]
Length = 127
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 83/126 (65%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
+MR+ L +VRG+GSAK+GT HF +QR TA+AN+P IIFFI F I Y PYE + LS
Sbjct: 2 NNMRTPLSKVRGLGSAKEGTDHFWRQRVTAVANVPLIIFFILFIIAYNGEPYEVVAGALS 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
N VA +MGL IS VHM+LGMQVIIEDYIH K+ L N+ F + LFS+L
Sbjct: 62 NPLVAVLMGLVVISGLVHMRLGMQVIIEDYIHAEGAKVALLLFNTFFTAAIGAVSLFSVL 121
Query: 123 KIAILG 128
K+ G
Sbjct: 122 KLGFGG 127
>gi|254781042|ref|YP_003065455.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040719|gb|ACT57515.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter asiaticus str. psy62]
Length = 130
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV
Sbjct: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS
Sbjct: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
Query: 121 LLKIAILGTL 130
LLKIAILGTL
Sbjct: 121 LLKIAILGTL 130
>gi|49474756|ref|YP_032798.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella quintana str. Toulouse]
gi|49240260|emb|CAF26730.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella quintana str. Toulouse]
Length = 128
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 80/127 (62%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D ++ LG+VRG+GSA++GT HF +R T++ N+P IFFI + Y + +
Sbjct: 1 MKKDFQTELGKVRGLGSAREGTEHFWLERLTSVLNLPLCIFFIVLILSLIGKDYTIVHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V +MGL T S+ HM+L MQV+IEDYI L+I+FL +N F +L +F+
Sbjct: 61 LSHPVVTILMGLLTFSVLYHMKLEMQVVIEDYIRREGLRILFLVLNVSFCFVLGGIIIFA 120
Query: 121 LLKIAIL 127
LLKIA+
Sbjct: 121 LLKIALG 127
>gi|254471020|ref|ZP_05084423.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudovibrio sp. JE062]
gi|211960162|gb|EEA95359.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudovibrio sp. JE062]
Length = 127
Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/125 (44%), Positives = 78/125 (62%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
DMR+ L +VRG+GSAKDGT HF +QR TA+AN+ I FF+ I A Y L N
Sbjct: 3 DMRTPLAKVRGLGSAKDGTTHFWRQRVTAVANVFLISFFVILVIALQGADYASFTEALQN 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ ++ L + +HM+LGMQVIIEDYIH LK++ L N FV ++ + + ++LK
Sbjct: 63 PVISILLLLVILVGCLHMKLGMQVIIEDYIHSEGLKLLLLMGNIFFVSIIALSSVVAVLK 122
Query: 124 IAILG 128
I+ G
Sbjct: 123 ISFGG 127
>gi|154245909|ref|YP_001416867.1| succinate dehydrogenase hydrophobic membrane anchor [Xanthobacter
autotrophicus Py2]
gi|154159994|gb|ABS67210.1| Succinate dehydrogenase hydrophobic membrane anchor [Xanthobacter
autotrophicus Py2]
Length = 135
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 53/124 (42%), Positives = 81/124 (65%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR++LGRVRG+GSA+ GT HF KQR T +AN+ +I FI I + Y + L +
Sbjct: 12 MRTALGRVRGLGSARSGTDHFFKQRVTGLANLILMIAFIGIVISLAGSSYAATRATLGHP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA ++ L +S++ HM++GMQV+IEDYIH LK+M + N+ F + + + F++LKI
Sbjct: 72 FVAVVILLTLLSVTTHMRIGMQVVIEDYIHTEALKVMLIVANTFFSIAIALAGAFAVLKI 131
Query: 125 AILG 128
++ G
Sbjct: 132 SLGG 135
>gi|319406314|emb|CBI79951.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella sp. AR 15-3]
Length = 128
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 73/128 (57%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M+ D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + S
Sbjct: 1 MEKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYSVVYSR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
S+ VA +MGL S +M+LGMQV+IEDYI ++I FL +N F LL +F+
Sbjct: 61 FSHPIVAVLMGLIIFSSLYYMKLGMQVVIEDYIPNEGMRIFFLVLNILFCFLLGSIMMFA 120
Query: 121 LLKIAILG 128
LLKIA+
Sbjct: 121 LLKIALGA 128
>gi|121602811|ref|YP_988427.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Bartonella bacilliformis KC583]
gi|120614988|gb|ABM45589.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Bartonella bacilliformis KC583]
Length = 128
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 76/127 (59%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M ++R+ LG+VRG+GSA GT HF Q T+ NIP +IFFI I Y I +
Sbjct: 1 MKKNLRTELGKVRGLGSAHKGTEHFWVQNLTSWINIPLLIFFIILMISLAGEDYSTIHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ + M L S HM+L MQV+IEDYI ++++++ FL +N + L+ +F+
Sbjct: 61 LSHPVILVFMVLTVFSNLYHMKLEMQVVIEDYIPHKIIRMFFLILNISYCCLIGSLIIFA 120
Query: 121 LLKIAIL 127
LLKIA+
Sbjct: 121 LLKIALG 127
>gi|92119076|ref|YP_578805.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
hamburgensis X14]
gi|91801970|gb|ABE64345.1| succinate dehydrogenase subunit D [Nitrobacter hamburgensis X14]
Length = 133
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ L RVR +G+A GT F +QR TA+A I I+ I + +L
Sbjct: 8 KSMRTPLSRVRNLGAAHSGTKDFWRQRLTAVAMILLIVPMIVVMMILLGRNQAGAAQILG 67
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ +A IM L ++ HM++GMQVIIEDY+H K+ + N+ F + L + +++
Sbjct: 68 SPPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDEKTKLASIMANNFFSVTLALAAAYAIF 127
Query: 123 KIAIL 127
K++
Sbjct: 128 KLSSG 132
>gi|163796398|ref|ZP_02190358.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [alpha proteobacterium BAL199]
gi|159178248|gb|EDP62792.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [alpha proteobacterium BAL199]
Length = 132
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 71/126 (56%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
MR+ L RVRG+GSAK+G H+ QR TAIA +P I+F+ + V+ +
Sbjct: 7 QSMRNPLARVRGLGSAKEGVHHWWAQRLTAIALVPLTIWFVISIAGLAGVDHAGAVAWIG 66
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ VA ++ L ++ H QLG+QV+IEDY+H +K+ L + L + +F++L
Sbjct: 67 SAPVAVLLVLLIAAVYWHAQLGVQVVIEDYVHNEAVKLTALIALKFAAIALGVASIFAVL 126
Query: 123 KIAILG 128
++A G
Sbjct: 127 RLAFGG 132
>gi|319899435|ref|YP_004159532.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella clarridgeiae 73]
gi|319403403|emb|CBI76971.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella clarridgeiae 73]
Length = 128
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 71/127 (55%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + S
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYNVVHSR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
S+ V +MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 FSHPIVTVLMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAIL 127
LLKIA+
Sbjct: 121 LLKIALG 127
>gi|158425368|ref|YP_001526660.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azorhizobium caulinodans ORS 571]
gi|158332257|dbj|BAF89742.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azorhizobium caulinodans ORS 571]
Length = 128
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 78/128 (60%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M MR+ LGRVRG+GSA+ GT HF QR TAI N+ ++ + I A Y +
Sbjct: 1 MHSPMRTPLGRVRGLGSARSGTEHFFLQRLTAIGNLILVVITLGIMISLLGAGYNAAHAT 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L N VA ++ L +S++ HM++GMQV+IEDY+H LK+ + N+ F ++ + F+
Sbjct: 61 LGNPIVAVVILLLLLSVTTHMRIGMQVVIEDYVHSEGLKVALIIANTFFTTVVGLAGAFA 120
Query: 121 LLKIAILG 128
+LKI++ G
Sbjct: 121 VLKISLGG 128
>gi|27375624|ref|NP_767153.1| succinate dehydrogenase hydrophobic membrane anchor protein subunit
[Bradyrhizobium japonicum USDA 110]
gi|3169723|gb|AAC17941.1| succinate dehydrogenase membrane anchor subunit [Bradyrhizobium
japonicum]
gi|27348761|dbj|BAC45778.1| succinate dehydrogenase hydrophobic membrane anchor protein subunit
[Bradyrhizobium japonicum USDA 110]
Length = 134
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 70/126 (55%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ LGRVR +G+A GT F +QR T +A + +I I + + +
Sbjct: 8 KRSMRTPLGRVRNLGAAHSGTSDFWRQRITGVAMVLMMIPVIVIIVMLFGRNQAFVAQTI 67
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++ +A IM L + + HM++GMQV+IEDY+H LK+ + +N+ F + + + +++
Sbjct: 68 GSLPIAIIMLLFIFASAWHMKIGMQVVIEDYVHNEKLKLTAIMLNNFFSIAVALASTYAI 127
Query: 122 LKIAIL 127
LK++
Sbjct: 128 LKLSSG 133
>gi|319409392|emb|CBI83036.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella schoenbuchensis R1]
Length = 128
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 56/127 (44%), Positives = 78/127 (61%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ G+VRG GSA +GTGHF + T ++ IFFI I Y+ I +
Sbjct: 1 MKKDFRTEFGKVRGFGSAHEGTGHFWLENLTGFTSVLLWIFFIVLVISLVGEGYDVIYAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ VA +MGL T S +M+LGMQV+IEDYI + L+I+FL +N+ F +L F +F+
Sbjct: 61 LSHPIVAVLMGLMTFSSLYYMKLGMQVVIEDYIPHGNLRILFLVLNTLFCCVLGGFIIFA 120
Query: 121 LLKIAIL 127
LLKI +
Sbjct: 121 LLKIVLG 127
>gi|75676983|ref|YP_319404.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421853|gb|ABA06052.1| succinate dehydrogenase subunit D [Nitrobacter winogradskyi Nb-255]
Length = 135
Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ LGRVR GSA GT F +QR T++A I I+ + + +L
Sbjct: 9 AKSMRTPLGRVRNHGSAHSGTTDFWRQRLTSVAMILLIVPMVVVMMILLGRNQAGAAQIL 68
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +A IM L ++ HM++GMQVIIEDY+H LK+ + N+ F + L + +++
Sbjct: 69 GSPPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDGKLKLASIMANNFFSVTLALTAAYAI 128
Query: 122 LKIAIL 127
K++
Sbjct: 129 FKLSSG 134
>gi|163869247|ref|YP_001610503.1| SdhD succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella tribocorum CIP 105476]
gi|161018950|emb|CAK02508.1| SdhD succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella tribocorum CIP 105476]
Length = 128
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D R+ LG+VRG GSA +GT HF +R T N+P +IF I + Y + +
Sbjct: 1 MKKDFRTELGKVRGRGSAHEGTEHFWLERLTGFINLPLLIFLIVLILSLVGKDYAIVRAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L++ VA +MGL T+S+ HM+L MQV+IEDYI ++ FL +N F + +FS
Sbjct: 61 LAHPIVAILMGLMTLSVIYHMKLVMQVVIEDYIPREGFRLFFLILNILFCFFIGGVIIFS 120
Query: 121 LLKIAILG 128
LLKIA+ G
Sbjct: 121 LLKIALGG 128
>gi|319407789|emb|CBI81440.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella sp. 1-1C]
Length = 128
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 71/128 (55%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FFI + Y + +
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTFFIILVMSCVGKDYSVVHAK 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 LSHPMVTVWMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAILG 128
LLKIA+
Sbjct: 121 LLKIALGA 128
>gi|85714478|ref|ZP_01045466.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
gi|85698925|gb|EAQ36794.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
Length = 135
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ LGRVR +GSA GT F +QR T++A I II + + +L
Sbjct: 9 AKSMRTPLGRVRNLGSAHSGTTDFWRQRLTSVAMILLIIPMVVVMMILLGRNQAGAAQIL 68
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +A IM L ++ HM++GMQVIIEDY+H LK+ + N+ F L + +++
Sbjct: 69 GSPPIAIIMLLFVVASIWHMKIGMQVIIEDYVHDEKLKLASIMANNFFSATLALTAAYAI 128
Query: 122 LKIAIL 127
K++
Sbjct: 129 FKLSSG 134
>gi|90421133|ref|ZP_01229035.1| succinate dehydrogenase hydrophobic membrane anchor, SdhD
[Aurantimonas manganoxydans SI85-9A1]
gi|90334625|gb|EAS48405.1| succinate dehydrogenase hydrophobic membrane anchor, SdhD
[Aurantimonas manganoxydans SI85-9A1]
Length = 126
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MR+SL RVRG+GSA +GTGHF +QR +AI+N+ I F+ I D PY ++ + L++
Sbjct: 3 EMRTSLRRVRGLGSAHEGTGHFWQQRLSAISNLVLITGFVILLIVLHDQPYAEVRAALAH 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V ++ L IS + HM+LGMQVIIEDY+H K+ L +N+ F + + + LF++ +
Sbjct: 63 PLVGLLVALTVISFTYHMRLGMQVIIEDYVHG-TTKLPLLILNNFFAIAIAVASLFAIAR 121
Query: 124 IAIL 127
++
Sbjct: 122 MSFG 125
>gi|319404829|emb|CBI78430.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bartonella rochalimae ATCC BAA-1498]
Length = 128
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 70/128 (54%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M D+R+ LG+VRG GSA GT HF + + AN+ FI + Y + +
Sbjct: 1 MKKDLRTELGKVRGFGSAHTGTEHFWLENLVSFANVLLWTLFIILVMSCVGKDYSVVHAR 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ V MGL S +M+LGMQV+IEDYI + ++I F +N F +L +F+
Sbjct: 61 LSHPMVTVWMGLMIFSSLYYMKLGMQVVIEDYIPHEGMRIFFFVLNILFCFILGSIMMFA 120
Query: 121 LLKIAILG 128
LLKIA+
Sbjct: 121 LLKIALGA 128
>gi|90421599|ref|YP_529969.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB18]
gi|90103613|gb|ABD85650.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisB18]
Length = 140
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 66/126 (52%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+R+ LG+VR G A GT F +QR T +A I+ + + ++
Sbjct: 14 AKSLRTPLGKVRKFGPAGSGTSDFWQQRITGVAMTLLILPVVVVIMMLLGRNQAGAAQII 73
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +A + L IS +VHM++GMQV+IEDY+ LK++ + N+ F + + + +F++
Sbjct: 74 GSPLIALTLILFIISSAVHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIFAI 133
Query: 122 LKIAIL 127
K++
Sbjct: 134 FKLSSG 139
>gi|300024742|ref|YP_003757353.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299526563|gb|ADJ25032.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomicrobium denitrificans ATCC 51888]
Length = 126
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 47/125 (37%), Positives = 73/125 (58%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ L R +GSAK+G HF KQR TA+AN+ +F + + A Y + L N
Sbjct: 2 TMRTPLKTARYLGSAKEGADHFWKQRVTAVANVVLAVFLVWLVVSLTGADYATVKRQLGN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
VA + +S ++HM+LGMQ IIEDY+H KI+ L +N+ F +++ + +FS+LK
Sbjct: 62 PLVALGLLSLVLSGAIHMRLGMQTIIEDYVHGEGAKIVALMLNTFFTIVVALVSIFSVLK 121
Query: 124 IAILG 128
++
Sbjct: 122 LSFGA 126
>gi|148554232|ref|YP_001261814.1| succinate dehydrogenase subunit D [Sphingomonas wittichii RW1]
gi|148499422|gb|ABQ67676.1| succinate dehydrogenase subunit D [Sphingomonas wittichii RW1]
Length = 129
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 72/122 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSAK G H+ +QR TA N+ +F+ + + ++ +V + + V
Sbjct: 5 TGIGRVRGLGSAKHGAMHWWRQRVTAAGNLLLATWFVVSLFRLPNLGHDVVVQWIGSPIV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L T+S+ HM+LG+QV++EDY+H K+ L + + + + +FS+LKIA
Sbjct: 65 AVPLVLLTVSVFYHMRLGLQVVLEDYVHEDAGKVFSLLLLNLYTIAGAALAIFSILKIAF 124
Query: 127 LG 128
G
Sbjct: 125 GG 126
>gi|86747452|ref|YP_483948.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris HaA2]
gi|86570480|gb|ABD05037.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris HaA2]
Length = 140
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 68/126 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ MR+ +G+VR +G A GT F +QR T +A I+ I + +L
Sbjct: 14 ERTMRTPMGKVRKLGPAGSGTSDFWQQRITGVAMTLLILPVIVVIMMLLGRNQAGAAQIL 73
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ ++ M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F++
Sbjct: 74 GSPLISLTMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFSIAVALAAIFAI 133
Query: 122 LKIAIL 127
K+A
Sbjct: 134 FKLASG 139
>gi|170744095|ref|YP_001772750.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium sp. 4-46]
gi|168198369|gb|ACA20316.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium sp. 4-46]
Length = 137
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 80/125 (64%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+R+S RV+G+G A GTG + R TA++N+P I+ F+ YE V ++
Sbjct: 9 TRTIRTSYARVQGLGPAHHGTGEWWLHRVTAVSNVPLILSFVVIVALCAGRSYEDAVRLV 68
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ VA ++ LG +S++ HM++GMQ++IEDY+H + LKI + N+ + ++ + CL+++
Sbjct: 69 SHPLVAILLILGVLSVTNHMRMGMQIVIEDYVHDKGLKIAAVIANTFYSTVVAVACLYAI 128
Query: 122 LKIAI 126
++I++
Sbjct: 129 VRISL 133
>gi|209883445|ref|YP_002287302.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Oligotropha carboxidovorans OM5]
gi|209871641|gb|ACI91437.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Oligotropha carboxidovorans OM5]
Length = 134
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ MR+ L VR +G+A GT F +QR TA+A +I I ++L
Sbjct: 8 NVSMRTPLANVRRLGAAHGGTSDFFRQRLTAVAMALLMIPVAVIVIMLVGRDQASAQALL 67
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ VA ++ L I+ VHM++G+QV+IEDY+H KI + N+ F + + ++++
Sbjct: 68 GSPVVAILLTLFIIAGCVHMKIGVQVVIEDYVHSEAAKISAILANNFFSFAVGLASIYAI 127
Query: 122 LKIAIL 127
K+++
Sbjct: 128 FKLSVG 133
>gi|218531817|ref|YP_002422633.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium chloromethanicum CM4]
gi|240140348|ref|YP_002964827.1| Succinate dehydrogenase delta subunit [Methylobacterium extorquens
AM1]
gi|254562943|ref|YP_003070038.1| succinate dehydrogenase, membrane anchor subunit [Methylobacterium
extorquens DM4]
gi|27902657|gb|AAO24620.1| succinate dehydrogenase delta subunit [Methylobacterium extorquens]
gi|218524120|gb|ACK84705.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium chloromethanicum CM4]
gi|240010324|gb|ACS41550.1| Succinate dehydrogenase delta subunit [Methylobacterium extorquens
AM1]
gi|254270221|emb|CAX26215.1| succinate dehydrogenase, membrane anchor subunit [Methylobacterium
extorquens DM4]
Length = 139
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 75/127 (59%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++
Sbjct: 11 ALSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALV 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL+++
Sbjct: 71 SHPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAI 130
Query: 122 LKIAILG 128
L++++ G
Sbjct: 131 LRVSLGG 137
>gi|39933295|ref|NP_945571.1| succinate dehydrogenase cytochrome b subunit [Rhodopseudomonas
palustris CGA009]
gi|192288648|ref|YP_001989253.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris TIE-1]
gi|39652920|emb|CAE25662.1| succinate dehydrogenase cytochrome b small subunit
[Rhodopseudomonas palustris CGA009]
gi|192282397|gb|ACE98777.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris TIE-1]
Length = 137
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 67/124 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ +G+VR G A GT F +QR T +A I+ I + +L +
Sbjct: 13 SMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLGRNQAAAAQILGS 72
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ IM L I+ ++HM++GMQV+IEDY+ LK++ + N+ F + + + +F++ K
Sbjct: 73 PLISLIMILFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIFAIFK 132
Query: 124 IAIL 127
+A
Sbjct: 133 MASG 136
>gi|299133111|ref|ZP_07026306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Afipia sp. 1NLS2]
gi|298593248|gb|EFI53448.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Afipia sp. 1NLS2]
Length = 135
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ L RVR +G+A GT F +QR TAIA II + +L
Sbjct: 9 TVSMRTPLARVRRLGAAHAGTSDFFRQRVTAIAMALLIIPVAIIVLMLTGRDQAAAAQLL 68
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ VA ++ L ++ +HM++G+QV+IEDY+H LK++ + N+ F + + +F++
Sbjct: 69 GSPIVAILLALFIVAGCLHMKIGVQVVIEDYVHSEALKLLAIIANNFFSFAVGLASIFAI 128
Query: 122 LKIAIL 127
LK++
Sbjct: 129 LKLSFG 134
>gi|188583473|ref|YP_001926918.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium populi BJ001]
gi|179346971|gb|ACB82383.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium populi BJ001]
Length = 139
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 74/127 (58%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ RV+G+G++ G HF QR T +N ++ F+ Y Q V+++
Sbjct: 11 ALSMRTPRARVKGLGASGHGASHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALV 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL+++
Sbjct: 71 SHPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAI 130
Query: 122 LKIAILG 128
+++++ G
Sbjct: 131 IRVSLGG 137
>gi|197103677|ref|YP_002129054.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Phenylobacterium zucineum HLK1]
gi|196477097|gb|ACG76625.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Phenylobacterium zucineum HLK1]
Length = 139
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 66/126 (52%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
R+ L R +G+GSAK G GH+I +R +A A IP ++ + I+ Y V+ +S
Sbjct: 14 SFRTPLSRAKGLGSAKHGVGHWIGERVSAAALIPLTLWAVYAVIRLAALDYYGAVAWIST 73
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++M L HM G++V++EDYIH L K L +N L +FS+LK
Sbjct: 74 PLNMTLMVLTLAFSFWHMHAGLRVVVEDYIHKTLSKAALLLLNFFVCGLAGALAVFSVLK 133
Query: 124 IAILGT 129
+A+ G
Sbjct: 134 VALGGA 139
>gi|220926985|ref|YP_002502287.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium nodulans ORS 2060]
gi|219951592|gb|ACL61984.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium nodulans ORS 2060]
Length = 137
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 80/125 (64%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+R++ RV+G+G A GT + R TA++NIP I+ F+ YE V ++
Sbjct: 9 TRTIRTAYARVQGLGPAHHGTSEWWLHRVTAVSNIPLIVSFVVIVALCAGRSYEDAVRLV 68
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ VA ++ LG +S++ HM++G+Q++IEDY+H + LKI + N+ + +++ + CL+++
Sbjct: 69 SHPLVAILLILGVLSVTNHMRMGLQIVIEDYVHDKGLKIAAVIANTFYSVVVAVACLYAI 128
Query: 122 LKIAI 126
++I++
Sbjct: 129 VRISL 133
>gi|114328743|ref|YP_745900.1| succinate dehydrogenase membrane anchor subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114316917|gb|ABI62977.1| succinate dehydrogenase membrane anchor subunit [Granulibacter
bethesdensis CGDNIH1]
Length = 132
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+GSAK G H+ +R T++A +P ++FI + ++ + +
Sbjct: 11 MRSHLGRARGLGSAKHGLTHWWAERVTSVALVPLTLWFIFAALHLTGHSRAEVAQWVGHP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ + H+QLG+QVIIEDY+H +KI L LL + C S+LK+
Sbjct: 71 VHAVLLLSLVFATFHHVQLGLQVIIEDYVHTESVKIASLLATKAVCFLLGLACAVSILKM 130
Query: 125 AI 126
+
Sbjct: 131 TL 132
>gi|316931810|ref|YP_004106792.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris DX-1]
gi|315599524|gb|ADU42059.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodopseudomonas palustris DX-1]
Length = 137
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 67/124 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ +G+VR G A GT F +QR T +A I+ I + +L +
Sbjct: 13 SMRTPIGKVRKFGPAGSGTSDFWRQRITGVAMTLLILPTIVVIMMLLGRNQAAAAQILGS 72
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+A +M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F++ K
Sbjct: 73 PLIALVMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFSIAVALAAIFAIFK 132
Query: 124 IAIL 127
+A
Sbjct: 133 MASG 136
>gi|115522539|ref|YP_779450.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisA53]
gi|115516486|gb|ABJ04470.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisA53]
Length = 137
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 69/126 (54%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ LG+VR +G A+ GT F +QR T +A I+ I + +L
Sbjct: 11 KNTMRTPLGKVRKLGPARSGTSDFWQQRITGVAMTLLILPVIIIIMMLLGRNQAGAAQIL 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +A M L ++ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F++
Sbjct: 71 GSPLIALTMILFIVASAIHMKIGMQVVIEDYIQNEKLKLVTIMANNFFSIAVALAPIFAI 130
Query: 122 LKIAIL 127
+K++
Sbjct: 131 IKLSSG 136
>gi|325920387|ref|ZP_08182318.1| succinate dehydrogenase subunit D [Xanthomonas gardneri ATCC 19865]
gi|325549134|gb|EGD20057.1| succinate dehydrogenase subunit D [Xanthomonas gardneri ATCC 19865]
Length = 128
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 68/127 (53%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
R+ L VRG+G+AK GT HF+ QR TA A + I+F+ F + + Y V+ +S
Sbjct: 2 NRYRTPLKNVRGLGAAKTGTEHFVLQRLTATALVVLSIWFLVFVLSLLGSDYPTAVAAVS 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A ++ +++ H Q+G+QV++EDYIH LL + L I +F++
Sbjct: 62 RPWNAILLVGFLVAMFWHAQIGLQVVLEDYIHNSLLALALQTTVKFVAALGAIVSIFAVA 121
Query: 123 KIAILGT 129
+IA+ G
Sbjct: 122 RIALGGA 128
>gi|163853007|ref|YP_001641050.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium extorquens PA1]
gi|163664612|gb|ABY31979.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium extorquens PA1]
Length = 139
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 75/127 (59%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++
Sbjct: 11 ALSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALV 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ VA I+ L +S+++HM+LGMQ +IEDY+H LK L N+ + + + CL+++
Sbjct: 71 SHPLVAIILILAVVSVTIHMRLGMQTVIEDYVHSHGLKFAALIANTFYAVAVAAACLYAI 130
Query: 122 LKIAILG 128
L++++ G
Sbjct: 131 LRVSLGG 137
>gi|254292678|ref|YP_003058701.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hirschia baltica ATCC 49814]
gi|254041209|gb|ACT58004.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hirschia baltica ATCC 49814]
Length = 132
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP-----YE 55
M MR+ LG+VRG+GSA+DG GHFI QR +A+A + + +F+ + +
Sbjct: 1 MSNSMRTPLGKVRGLGSARDGAGHFIGQRVSAVALVFLVPWFLISLLGATRGDNTLERFA 60
Query: 56 QIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
+ LS A ++ L HM+LG+QV+IEDYI + +I+ L +N+ LI
Sbjct: 61 NAEAWLSQPLNAILVLLAVCGTIYHMRLGLQVVIEDYISGHMPRIVLLMLNTFLSFALIA 120
Query: 116 FCLFSLLKIAIL 127
+FS+ K+A+
Sbjct: 121 ATVFSVFKVAVA 132
>gi|154251887|ref|YP_001412711.1| succinate dehydrogenase hydrophobic membrane anchor [Parvibaculum
lavamentivorans DS-1]
gi|154155837|gb|ABS63054.1| Succinate dehydrogenase hydrophobic membrane anchor [Parvibaculum
lavamentivorans DS-1]
Length = 141
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 72/126 (57%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
DMR+ L RV +GSAK GT I+QR TA+A P +FF+ + A YE S L
Sbjct: 15 ANDMRTPLARVLHLGSAKSGTQDHIRQRLTAVAIAPLSLFFLVLLVALTGADYETARSWL 74
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+N V + ++ +HM++GMQ++IEDY+ LK + + N+ F + + CL+++
Sbjct: 75 ANPLVGILALCLIVAAIIHMRIGMQIVIEDYVIAPGLKHLSILANTFFSYGVGLACLYAV 134
Query: 122 LKIAIL 127
LK+A
Sbjct: 135 LKLAFG 140
>gi|298293273|ref|YP_003695212.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Starkeya novella DSM 506]
gi|296929784|gb|ADH90593.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Starkeya novella DSM 506]
Length = 136
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 75/124 (60%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ RV G+GSA+ GTGHF QR TA++N+ +I + I + +V+ L N
Sbjct: 13 MRTPRRRVAGLGSARSGTGHFWLQRVTALSNLILVIIALPIVIAVAGEGHAGVVATLGNP 72
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
VA ++ L +S+ +HM++GMQV+IEDY+H +K++ L N+ F + F++LKI
Sbjct: 73 LVAIVLLLLLLSVCMHMRIGMQVVIEDYVHAEGVKVLALIANTFFTTAVGFAGAFAILKI 132
Query: 125 AILG 128
+ G
Sbjct: 133 SFGG 136
>gi|315122381|ref|YP_004062870.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495783|gb|ADR52382.1| succinate dehydrogenase hydrophobic membrane anchor [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 128
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 96/126 (76%), Positives = 113/126 (89%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+MRSSLG+VRGMGSAKDGTGHF+KQRFTAIANIPF+IFFI FFI+YG AP+EQIVSV+SN
Sbjct: 2 NMRSSLGKVRGMGSAKDGTGHFLKQRFTAIANIPFVIFFIIFFIRYGSAPHEQIVSVVSN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ VASIMGLG +SI HMQLGMQVIIEDY+H +LLKI+ L +NS FVL + +FCLFS+LK
Sbjct: 62 LFVASIMGLGAVSIFFHMQLGMQVIIEDYVHSKLLKIVLLMLNSSFVLFMAVFCLFSILK 121
Query: 124 IAILGT 129
I+ILG
Sbjct: 122 ISILGN 127
>gi|304394276|ref|ZP_07376199.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ahrensia sp. R2A130]
gi|303293716|gb|EFL88093.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ahrensia sp. R2A130]
Length = 136
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
MD D R+ L RVRG+GSAKDGT HF QR TA+AN+ I FF+ + A +E+ V+
Sbjct: 1 MDQDFRTPLSRVRGLGSAKDGTQHFWHQRLTAMANLVLITFFVWTVVALNGATWEETVAY 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
LS+ VA +M + + HM+LGMQVIIEDY+H K L N F + + C+F+
Sbjct: 61 LSSPLVAIVMVMVLGAGIYHMKLGMQVIIEDYVHGAAGK-ALLIANVFFAIAIAAACVFA 119
Query: 121 LLKIAIL 127
+LK+
Sbjct: 120 VLKLGFG 126
>gi|21231575|ref|NP_637492.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768303|ref|YP_243065.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991442|ref|YP_001903452.1| succinate dehydrogenase (ubiquinone) membrane anchor subunit
[Xanthomonas campestris pv. campestris str. B100]
gi|21113262|gb|AAM41416.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66573635|gb|AAY49045.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167733202|emb|CAP51400.1| succinate dehydrogenase (ubiquinone) membrane anchor subunit
[Xanthomonas campestris pv. campestris]
Length = 128
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 67/123 (54%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVVQRLTATALVPLSIWFLILVLSLIGADHTAASAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL + + +L I +F++ +I
Sbjct: 64 WNAILLVGFLIASFWHAQLGMQVVLEDYVHNSLLALAAQTLVRFVAVLGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|319786901|ref|YP_004146376.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudoxanthomonas suwonensis 11-1]
gi|317465413|gb|ADV27145.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudoxanthomonas suwonensis 11-1]
Length = 127
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 67/124 (54%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A + ++F+ F + + Y +S
Sbjct: 4 YRTPLKNVRGLGTAKTGTDHFVHQRLTATALVFLSLWFVYFVLGLVGSDYMAATDAVSKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ +++ H QLG+QV++EDY+H L+ + +L I +F++ +I
Sbjct: 64 WNAVLLVGFLVAMFWHAQLGLQVVLEDYVHNSLVALALQVSVKFIAVLGAIVSIFAVARI 123
Query: 125 AILG 128
A+ G
Sbjct: 124 ALAG 127
>gi|296532572|ref|ZP_06895278.1| succinate dehydrogenase membrane anchor subunit [Roseomonas
cervicalis ATCC 49957]
gi|296267097|gb|EFH13016.1| succinate dehydrogenase membrane anchor subunit [Roseomonas
cervicalis ATCC 49957]
Length = 132
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+ S+LGRVRG+GSAK GT H+ QR +++A +P ++F+ +E ++ +
Sbjct: 8 SLRLESALGRVRGLGSAKQGTHHWWMQRVSSMALLPLTLWFVISVATLAGKSHEATIAWI 67
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++ A ++ H G+QV+IEDY+ ++ + L + ++
Sbjct: 68 AHPLNAVLLLASIGLSFQHAASGLQVVIEDYVRGEFARMFSVLAVKAACWLFGLLSAIAV 127
Query: 122 LKIAI 126
LKIA+
Sbjct: 128 LKIAL 132
>gi|149184715|ref|ZP_01863033.1| succinate dehydrogenase, cytochrome b subunit [Erythrobacter sp.
SD-21]
gi|148832035|gb|EDL50468.1| succinate dehydrogenase, cytochrome b subunit [Erythrobacter sp.
SD-21]
Length = 128
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 65/123 (52%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSA +G H+++QRFTAI N+ ++F Y + S
Sbjct: 5 TPIGRVRGLGSAHEGPHHWLQQRFTAIGNLVLVLFLAVSIALLPSYDYTTMSGWASQTLP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A+ + L I+ H ++G+QV+IEDY+H K + + + + +F L S+ +IA
Sbjct: 65 ATALALICINTFWHARIGLQVLIEDYVHTPGNKFACIALLNLAAIGGAVFGLVSIARIAF 124
Query: 127 LGT 129
G
Sbjct: 125 GGI 127
>gi|114320489|ref|YP_742172.1| succinate dehydrogenase subunit D [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226883|gb|ABI56682.1| succinate dehydrogenase subunit D [Alkalilimnicola ehrlichii
MLHE-1]
Length = 126
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 71/124 (57%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
++R+++ +G+GSAKDG H+ QR TA+A +P +++ ++G A YE V+ ++N
Sbjct: 2 NLRTNIKEAQGLGSAKDGVSHWWLQRLTAVALVPLMLWLAFGLARHGGAGYEATVAWVAN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ L ++ H++LG+QV+IEDY+H K L +LL + ++L+
Sbjct: 62 PMTTVLWVLSLAALFWHIKLGLQVVIEDYVHDERAKFASLIAMKFITVLLAAIAILAVLR 121
Query: 124 IAIL 127
+A+
Sbjct: 122 VALG 125
>gi|91974960|ref|YP_567619.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB5]
gi|91681416|gb|ABE37718.1| succinate dehydrogenase subunit D [Rhodopseudomonas palustris
BisB5]
Length = 140
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
MR+ +G+VR +G A GT F +QR T +A + + + +L +
Sbjct: 16 SMRTPMGKVRKLGPAGSGTSDFWQQRITGVAMTLLTLPVVVVVMMLLGRNQAGAAQILGS 75
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ M L I+ ++HM++GMQV+IEDYI LK++ + N+ F + + + +F++ K
Sbjct: 76 PLISLTMILFIIASAIHMKIGMQVVIEDYIQNEKLKLVTVMANNFFTIAVALAAIFAIFK 135
Query: 124 IAIL 127
+A
Sbjct: 136 LASG 139
>gi|182679665|ref|YP_001833811.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182635548|gb|ACB96322.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 130
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 67/125 (53%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR++ RVR +G+A+ GT R T++A +P I F+ + Y+ +V+ L
Sbjct: 5 SSSMRTAASRVRFLGAARSGTAETWHMRATSVALLPLSIAFVWIVLSLLGKNYQDVVATL 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ A ++ L ++ HM++GMQ II+DY+H K L N F + + C++++
Sbjct: 65 GSPLPALLILLFVLASVYHMKIGMQSIIDDYVHEPHFKDWALLGNLFFSFCIGLACIYAV 124
Query: 122 LKIAI 126
LK++
Sbjct: 125 LKLSF 129
>gi|148251846|ref|YP_001236431.1| succinate dehydrogenase subunit D [Bradyrhizobium sp. BTAi1]
gi|146404019|gb|ABQ32525.1| succinate dehydrogenase subunit D [Bradyrhizobium sp. BTAi1]
Length = 124
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 71/123 (57%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ LGRVR +G+A GT F +QR TA+A I+ + I +L ++
Sbjct: 1 MRTPLGRVRNLGAAHSGTSDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+A IM L I+ HM++GMQV+IEDY+H LK++ + N+ F + + + +++L+K+
Sbjct: 61 PIALIMLLFVIASCWHMKIGMQVVIEDYVHSEPLKLVAIMANNFFAVTVALASIYALIKL 120
Query: 125 AIL 127
+
Sbjct: 121 STG 123
>gi|285018595|ref|YP_003376306.1| succinate dehydrogenase membrane anchor subunit protein
[Xanthomonas albilineans GPE PC73]
gi|283473813|emb|CBA16315.1| putative succinate dehydrogenase membrane anchor subunit protein
[Xanthomonas albilineans]
Length = 128
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A + I+F+ + A Y ++
Sbjct: 4 YRTPLKNVRGLGAAKSGTEHFVLQRLTATALVGLTIWFLTLVLSLLGADYVTATQAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I++ H Q+G+QVI+EDY+H LL + +L I +F++ +I
Sbjct: 64 WNAVLLVGFLIAMFWHAQIGLQVILEDYVHNSLLALALQTTVKFIAVLGAIVGVFAVARI 123
Query: 125 AILGT 129
A+
Sbjct: 124 ALGSA 128
>gi|288957015|ref|YP_003447356.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azospirillum sp. B510]
gi|288909323|dbj|BAI70812.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Azospirillum sp. B510]
Length = 131
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
+RS L RG+GSAK GT H+ QR TAIA +P ++F+ I + A + V+ +
Sbjct: 5 SKTLRSPLQVARGLGSAKHGTEHWWSQRLTAIALVPLTVWFVFGVIGHLGADHAAFVAWM 64
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ A +M L + H Q G+QV+IEDY++ K+ + L C+ ++
Sbjct: 65 KSPFSAVMMVLTAVVTFHHAQSGLQVVIEDYVNVEWQKMALIIGVKFLSFALAAACVLAV 124
Query: 122 LKIAILG 128
+KI I
Sbjct: 125 VKIFIGA 131
>gi|114769285|ref|ZP_01446911.1| probable succinate dehydrogenase membrane anchor subunit protein
[alpha proteobacterium HTCC2255]
gi|114550202|gb|EAU53083.1| probable succinate dehydrogenase membrane anchor subunit protein
[alpha proteobacterium HTCC2255]
Length = 126
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
R+ +V G+GSAK G H+ +R ++A IP I F++ + ++S N
Sbjct: 2 TFRTDRAKVLGLGSAKSGADHWFGERLKSVALIPLTIIFVSIVAPLIGKDHTTVISSFQN 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ + L + H++ G+QV+IEDY+H + ++ + N F + +F++LK
Sbjct: 62 PFVSISLILFFLVSFKHLEEGLQVVIEDYVHSKGSLLLLIIFNKLFCWTFGLAAVFAILK 121
Query: 124 IAILG 128
I G
Sbjct: 122 ITFAG 126
>gi|88812337|ref|ZP_01127587.1| succinate dehydrogenase membrane anchor subunit [Nitrococcus
mobilis Nb-231]
gi|88790344|gb|EAR21461.1| succinate dehydrogenase membrane anchor subunit [Nitrococcus
mobilis Nb-231]
Length = 126
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 70/125 (56%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
R+ L + G+G++ GT + QR +++A +P +I+ I +++G A Y + LS+
Sbjct: 2 SFRTPLKQALGLGASHSGTSRWWAQRVSSVALVPLLIWLIIGIVRHGGADYTDAQAWLSS 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A + L ++ H LGMQVI+EDY+ + +++ + + ++L + +F++L
Sbjct: 62 PITAVLTILTLVASFYHGALGMQVIVEDYVSHETVQLALVVLVKFAAMVLAVAGIFAVLL 121
Query: 124 IAILG 128
+A+ G
Sbjct: 122 VALGG 126
>gi|87199762|ref|YP_497019.1| succinate dehydrogenase subunit D [Novosphingobium aromaticivorans
DSM 12444]
gi|87135443|gb|ABD26185.1| succinate dehydrogenase subunit D [Novosphingobium aromaticivorans
DSM 12444]
Length = 127
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+GRVRG+GS+ +GT H++ R TA+ N+ I F + D Y + ++
Sbjct: 5 TSIGRVRGLGSSHEGTHHWLTARLTAVGNLVLITFLVVSLALLPDYSYATVRGWVARPVP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + L I+ H ++G+QV++EDY+H KI + + + F + S+L+IA+
Sbjct: 65 SIALILIMINTFTHARMGVQVMLEDYVHEEGGKIAAWLLVNIVPFVAAAFGILSVLRIAL 124
Query: 127 LGT 129
G
Sbjct: 125 GGA 127
>gi|53804138|ref|YP_114004.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylococcus capsulatus str. Bath]
gi|53757899|gb|AAU92190.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Methylococcus capsulatus str. Bath]
Length = 126
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
+ R+ L R RG+GSA++G + +QR TA+A +P ++F A + ++V+ ++
Sbjct: 2 KNYRTPLARARGLGSAREGLHDWWRQRVTAVALVPLGLWFAFSVALLPSASHAELVAWIN 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ + H LG+QV+IEDY+H LK++ + V L + ++++L
Sbjct: 62 VPWNTLLLLSFILIAFYHTMLGLQVVIEDYVHLDWLKLVGILGVKLVVSFLTLAAVYAIL 121
Query: 123 KIAIL 127
+I
Sbjct: 122 RIVFT 126
>gi|146337398|ref|YP_001202446.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bradyrhizobium sp. ORS278]
gi|146190204|emb|CAL74196.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bradyrhizobium sp. ORS278]
Length = 124
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 72/123 (58%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ LGRVR +G+A GTG F +QR TA+A I+ + I +L ++
Sbjct: 1 MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+A IM L ++ HM++GMQVIIEDY+H LK++ + N+ F + + I +++L+K+
Sbjct: 61 PIALIMLLFVVASCWHMKIGMQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKL 120
Query: 125 AIL 127
+
Sbjct: 121 STG 123
>gi|162147200|ref|YP_001601661.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209544253|ref|YP_002276482.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161785777|emb|CAP55348.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531930|gb|ACI51867.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gluconacetobacter diazotrophicus PAl 5]
Length = 140
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS L R RG+GSAK G H+ +R +A+A +P +F+ ++ + E +V
Sbjct: 12 MRSQLSRARGLGSAKTGVDHWWMERMSAVALVPLSGWFVLQVLRLAGSSQEDVVEWGGKP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+S++ + HMQLG+QVII+DY+H + + L M L+ +F + ++LK+
Sbjct: 72 VNSSMLLALMVLTFYHMQLGLQVIIDDYVHGKAHLPVSLLM-KGAAFLIGLFAVIAVLKL 130
Query: 125 AIL 127
A+
Sbjct: 131 ALA 133
>gi|103488507|ref|YP_618068.1| succinate dehydrogenase, cytochrome b subunit [Sphingopyxis
alaskensis RB2256]
gi|98978584|gb|ABF54735.1| succinate dehydrogenase subunit D [Sphingopyxis alaskensis RB2256]
Length = 134
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 74/121 (61%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ LGRVRG+GS+ G+ H+++QR TA+ NI + F ++ A + ++ SN +V
Sbjct: 5 TRLGRVRGLGSSHHGSHHWLQQRLTALGNILLVSFLFVSLLRLPLADHGAVLRWASNPSV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L IS+ H++LG+QV+IEDYIH ++ L + + + + + +F++++IA+
Sbjct: 65 ALALILMVISVFWHLRLGLQVMIEDYIHGEATRLFALVLLNFYAIGGAAYGIFAIVRIAL 124
Query: 127 L 127
Sbjct: 125 A 125
>gi|332188518|ref|ZP_08390238.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingomonas sp. S17]
gi|332011423|gb|EGI53508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingomonas sp. S17]
Length = 127
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+++GRVRG+GSAK GT H++ QR TA +N +++ + ++ Y + L+N
Sbjct: 5 TAIGRVRGLGSAKSGTHHWLNQRLTAGSNFLLVVWLLISILRQPSYDYAAMRLWLANPWA 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A M + SI HM+LG+QV+IEDY + ++ L + + FV + +FS+LKIA
Sbjct: 65 AIPMVMLVASIFYHMRLGLQVVIEDYEQDQN-RVALLVVMNLFVFTIAAVAIFSILKIAF 123
Query: 127 LGT 129
Sbjct: 124 GAA 126
>gi|166712287|ref|ZP_02243494.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 128
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVMQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL + + ++ I +F++ +I
Sbjct: 64 WNAILLVAFLIASFWHAQLGMQVVLEDYVHDPLLALTAQTLVRFVAVVGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|307295106|ref|ZP_07574948.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingobium chlorophenolicum L-1]
gi|306879580|gb|EFN10798.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sphingobium chlorophenolicum L-1]
Length = 129
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSA+ G H++ QR+TAI N+ +++ + I Y+ +V ++N V
Sbjct: 5 TGIGRVRGLGSARHGAHHWLAQRYTAIGNLLLVLWLLFSLIALPGLDYQSVVGWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +SI H++LGMQV++EDY+H + L + + + + + +F++ KIA
Sbjct: 65 AVPLMLMIVSIFWHLRLGMQVMLEDYVHDKGLAFLSMLLLNFYAFGGAAAGVFAIAKIAF 124
Query: 127 LGTL 130
G +
Sbjct: 125 TGIV 128
>gi|190573777|ref|YP_001971622.1| putative succinate dehydrogenase hydrophobic membrane anchor
subunit [Stenotrophomonas maltophilia K279a]
gi|190011699|emb|CAQ45318.1| putative succinate dehydrogenase hydrophobic membrane anchor
subunit [Stenotrophomonas maltophilia K279a]
Length = 128
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 4 FRTPLKNVRGLGSAKTGTEHFVHQRLTAAALVVLGIWFLVFVLGLLGSDYATAAAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A + I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 64 WNAVPLIGLLIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|23014377|ref|ZP_00054197.1| COG2142: Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 127
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 70/124 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+ S +GR RG+GSAK+G H+I QR TAI IP ++F I A Y + ++
Sbjct: 4 LESPVGRARGLGSAKEGASHWIAQRVTAIFLIPLSLWFAVSVIGLSHADYATFKAWMAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+S++ L +++ H QLG+QV+IEDY+H K+ L + + L +F S+LK+
Sbjct: 64 GNSSLLLLTVLTVLYHAQLGLQVVIEDYVHCECKKVAALVGSKLVIAFLAVFMTVSILKV 123
Query: 125 AILG 128
AI
Sbjct: 124 AIGA 127
>gi|58581932|ref|YP_200948.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84623844|ref|YP_451216.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188576492|ref|YP_001913421.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xanthomonas oryzae pv. oryzae PXO99A]
gi|50313516|gb|AAT74620.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae]
gi|58426526|gb|AAW75563.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84367784|dbj|BAE68942.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188520944|gb|ACD58889.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xanthomonas oryzae pv. oryzae PXO99A]
Length = 128
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVMQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL + + ++ I +F++ +I
Sbjct: 64 WNAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALTAQTLVRFVAVVGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|294011058|ref|YP_003544518.1| succinate dehydrogenase hydrophobic anchor subunit [Sphingobium
japonicum UT26S]
gi|292674388|dbj|BAI95906.1| succinate dehydrogenase hydrophobic anchor subunit [Sphingobium
japonicum UT26S]
Length = 129
Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSA+ G H++ QR+TAI N+ +++ + I Y+ +V ++N V
Sbjct: 5 TGIGRVRGLGSARHGAHHWLAQRYTAIGNLLLVLWLLFSLIALPGLDYQSVVGWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +SI H++LGMQV++EDY+H + L + + + + + +F++ KIA
Sbjct: 65 AVPLMLMIVSIFWHLRLGMQVMLEDYVHDKGLAFLSMLLLNFYAFGGAAAGVFAIAKIAF 124
Query: 127 LGTL 130
G +
Sbjct: 125 TGIV 128
>gi|332285735|ref|YP_004417646.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Pusillimonas sp. T7-7]
gi|330429688|gb|AEC21022.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Pusillimonas sp. T7-7]
Length = 137
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+R+ L R +GS+K G H+ QR TAIA IP I+ + F A Y +++ ++
Sbjct: 9 SLRTPLKVARRLGSSKSGVHHWWLQRLTAIALIPLSIWLLYFMGALMHASYPTVLAAIAQ 68
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A + + ++ + H LG+QVIIEDY+H R L++ +L + C+ ++L
Sbjct: 69 PVHAIFLIVLSLCLFWHGALGLQVIIEDYVHTRWLEVALQIALRFGAILATLACVLAVLA 128
Query: 124 IAIL 127
I +
Sbjct: 129 IWLG 132
>gi|289669027|ref|ZP_06490102.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 128
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 2 NRYRTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVA 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A ++ I+ H QLGMQV++EDY+H LL +M + +L I +F++
Sbjct: 62 KPWNAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALMAQTLVRFVAVLGAIVSVFAVA 121
Query: 123 KIAIL 127
+IA+
Sbjct: 122 RIALG 126
>gi|330991157|ref|ZP_08315110.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Gluconacetobacter sp. SXCC-1]
gi|329761743|gb|EGG78234.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Gluconacetobacter sp. SXCC-1]
Length = 143
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS L R RG+GS + G GH+ +R +A+A +P +F+ + A ++ +
Sbjct: 12 MRSQLSRARGLGSGQAGVGHWWAERASAVALVPLSGWFVIQVFRLAGASQPEVAKWGARP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
++M I H QLG+QVII+DY+H + + + V LL +F S+LK+
Sbjct: 72 FNTTMMLSLVILTFYHTQLGLQVIIDDYVHGKAH-LPAGLLMKGIVFLLGLFGTVSVLKL 130
Query: 125 AILGT 129
A+ G+
Sbjct: 131 ALAGS 135
>gi|254521173|ref|ZP_05133228.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas sp. SKA14]
gi|219718764|gb|EED37289.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas sp. SKA14]
Length = 128
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 4 FRTPLKSVRGLGSAKTGTEHFVHQRLTAAALVVLGIWFLVFVLSLLGSDYATAAAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A + I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 64 WNAVPLIGLLIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|325917572|ref|ZP_08179772.1| succinate dehydrogenase subunit D [Xanthomonas vesicatoria ATCC
35937]
gi|325536206|gb|EGD08002.1| succinate dehydrogenase subunit D [Xanthomonas vesicatoria ATCC
35937]
Length = 128
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVVQRLTATALVPLSIWFLIFVLSLIGADHAAASAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL + + +L I +F++ +I
Sbjct: 64 WNAILLVGFLIASFWHAQLGMQVVLEDYVHNSLLALAAQTIVRFVAVLGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|78047798|ref|YP_363973.1| putative succinate dehydrogenase membrane anchor subunit
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325928376|ref|ZP_08189571.1| succinate dehydrogenase subunit D [Xanthomonas perforans 91-118]
gi|78036228|emb|CAJ23919.1| putative succinate dehydrogenase membrane anchor subunit
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325541252|gb|EGD12799.1| succinate dehydrogenase subunit D [Xanthomonas perforans 91-118]
Length = 128
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLIGADHAAATAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL ++ + +L I +F++ +I
Sbjct: 64 WNAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|21242815|ref|NP_642397.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|21108301|gb|AAM36933.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|50981402|gb|AAT91479.1| succinate dehydrogenase subunit D [Xanthomonas citri]
Length = 128
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLVFVLSLIGADHAAASAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ I+ H QLGMQV++EDY+H LL ++ + +L I +F++ +I
Sbjct: 64 WNAILLVAFLIASFWHAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|289665884|ref|ZP_06487465.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 128
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 68/125 (54%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 2 NRYRTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLMGADHAAATAAVA 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A ++ I H QLGMQV++EDY+H LL +M + +L I +F++
Sbjct: 62 KPWNAILLVAFLIVSFWHAQLGMQVVLEDYVHDSLLALMAQTLVRFVAVLGAIVSVFAVA 121
Query: 123 KIAIL 127
+IA+
Sbjct: 122 RIALG 126
>gi|307822159|ref|ZP_07652391.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacter tundripaludum SV96]
gi|307736725|gb|EFO07570.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacter tundripaludum SV96]
Length = 126
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 67/121 (55%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
D R+ L RV+G+GSAKDGT H+ QR TA+A IP + I F APY+Q V L++
Sbjct: 2 DYRTPLSRVKGLGSAKDGTTHWWMQRVTAVALIPLSFWLIYFLGLSLTAPYQQTVVWLTS 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+ I+ H LG+QV+IEDY+ KI+ ++ + L L I L ++ +
Sbjct: 62 PVNTVCIVAWIIAAFYHAALGLQVVIEDYVAAEGPKIISIWAVNLAFLFLAIAALLAVFR 121
Query: 124 I 124
I
Sbjct: 122 I 122
>gi|294624874|ref|ZP_06703531.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665037|ref|ZP_06730344.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600833|gb|EFF44913.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605194|gb|EFF48538.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 128
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+G+AK GT HF+ QR TA A +P I+F+ F + A + + ++
Sbjct: 4 YRTPLKNVRGLGAAKTGTEHFVIQRLTAAALVPLSIWFLIFVLSLIGADHAAASAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ ++ H QLGMQV++EDY+H LL ++ + +L I +F++ +I
Sbjct: 64 WNAILLVAFLVASFWHAQLGMQVVLEDYVHDSLLALIAQTLVRFVAVLGAIVSVFAVARI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|329114747|ref|ZP_08243504.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Acetobacter pomorum DM001]
gi|326695878|gb|EGE47562.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Acetobacter pomorum DM001]
Length = 137
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+G+ G GH+ +R TA + +P +F+ + G A + ++V
Sbjct: 11 MRSQLGRARGLGAGHSGVGHWWAERVTAASLLPLSTWFVVQMFRLGGADHAEVVKWGGKP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A+++ I+ H QLG+QVI++DY+H + + + LL + + +++K+
Sbjct: 71 VNATMLIALIITTFYHAQLGLQVIVDDYVHGKAH-LPARLLVKIGTSLLGLLGVIAVIKL 129
Query: 125 AILGT 129
+ G+
Sbjct: 130 FVRGS 134
>gi|83313050|ref|YP_423314.1| succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magneticum AMB-1]
gi|82947891|dbj|BAE52755.1| Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magneticum AMB-1]
Length = 126
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 70/125 (56%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+ S +GR RG+GSAK+G GH+I QR TAI IP ++F I A Y + ++
Sbjct: 2 SLESPVGRARGLGSAKEGAGHWIAQRVTAIFLIPLSLWFAVSVIGLSHADYATFKAWMAK 61
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
+S++ L +++ H QLG+QV+IEDY+ KI L + + L +F S+LK
Sbjct: 62 PGNSSLLLLTVLTVLYHAQLGLQVVIEDYVSCECKKIAALVGSKLIIAFLAVFMTVSILK 121
Query: 124 IAILG 128
+AI
Sbjct: 122 VAIGA 126
>gi|15837673|ref|NP_298361.1| succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
gi|9106018|gb|AAF83881.1|AE003943_12 succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
Length = 127
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 4 YRTPLKNARGLGAAKAGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++I
Sbjct: 64 WNAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALALQTMVKFIAVLGAVASVFAVVRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|194365314|ref|YP_002027924.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas maltophilia R551-3]
gi|194348118|gb|ACF51241.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Stenotrophomonas maltophilia R551-3]
Length = 128
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 68/123 (55%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L VRG+GSAK GT HF+ QR TA A + I+F+ F + + Y + ++
Sbjct: 4 FRTPLKGVRGLGSAKTGTEHFVHQRLTAAALVALGIWFLVFVLGLLGSDYATAAAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A + I++ H QLGMQV++EDYIH LL ++ +L +I +F++ +I
Sbjct: 64 WNAVPLIGLLIAMFWHAQLGMQVVLEDYIHESLLALVLQTAVKFVAVLGMIVSVFAVGRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|121996855|ref|YP_001001642.1| succinate dehydrogenase, cytochrome b subunit [Halorhodospira
halophila SL1]
gi|121588260|gb|ABM60840.1| succinate dehydrogenase subunit D [Halorhodospira halophila SL1]
Length = 127
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+++ R RG+GSAK+G H+ QR TA+ +P +++ A +E + ++N
Sbjct: 4 YETAVSRARGLGSAKNGFHHWWHQRLTALVLVPLMMWLGIGLALQAGADFEAARAWVANP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A+++ I + H LG+QV+IEDY+H LK L+ + + ++++I
Sbjct: 64 FNATLLIAAIIMLFYHGALGVQVVIEDYVHLEGLKWFGNLAVYFACFLVAVAGILAVIQI 123
Query: 125 AILG 128
+ G
Sbjct: 124 VLGG 127
>gi|85708848|ref|ZP_01039914.1| hypothetical protein NAP1_06395 [Erythrobacter sp. NAP1]
gi|85690382|gb|EAQ30385.1| hypothetical protein NAP1_06395 [Erythrobacter sp. NAP1]
Length = 128
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 65/123 (52%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+G+VRG+GS+ G H++ R TAI N+ + + I F+ D Y+ + LS
Sbjct: 5 TSIGKVRGLGSSHHGAHHWLAARTTAIGNLVLMTWLILSFVLLPDFSYQSVSGWLSQPIA 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A M L IS+ H +LG+QV+IEDYIH K L + F +FS+ +A+
Sbjct: 65 AVPMILLIISVFYHARLGLQVVIEDYIHEPGSKFALLSALNLAAFGGGAFAIFSVASLAL 124
Query: 127 LGT 129
G
Sbjct: 125 TGA 127
>gi|83944806|ref|ZP_00957172.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Oceanicaulis alexandrii HTCC2633]
gi|83851588|gb|EAP89443.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Oceanicaulis alexandrii HTCC2633]
Length = 125
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
D R+ L + RG+GSAK G GHFI QR +A+A + + F+ A Y + + +
Sbjct: 3 DFRTPLAKARGLGSAKSGVGHFIAQRVSALALVILVPLFVWAVASLPGADYASAYAFVGS 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A + L + HM+LG+QV+IEDYIH + K + L N+ L + L+++L
Sbjct: 63 PYGAILTLLTLTAALYHMRLGLQVVIEDYIHKPMSKALLLIANTLICAGLWVAALYAVLA 122
Query: 124 IA 125
IA
Sbjct: 123 IA 124
>gi|258541136|ref|YP_003186569.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256632214|dbj|BAH98189.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256635271|dbj|BAI01240.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256638326|dbj|BAI04288.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256641380|dbj|BAI07335.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256644435|dbj|BAI10383.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256647490|dbj|BAI13431.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256650543|dbj|BAI16477.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653534|dbj|BAI19461.1| succinate dehydrogenase membrane anchor subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 137
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS LGR RG+G+ G GH+ +R TA + +P +F+ + G A + ++V
Sbjct: 11 MRSQLGRARGLGAGHSGVGHWWAERVTAASLLPLSTWFVVQMFRLGGADHTEVVKWGGKP 70
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A+++ I+ H QLG+QVI++DY+H + + + LL + + +++K+
Sbjct: 71 VNATMLIALIITTFYHAQLGLQVIVDDYVHGKAH-LPTRLLVKIGTSLLGLLGVIAVIKL 129
Query: 125 AILGT 129
+ G+
Sbjct: 130 FVRGS 134
>gi|71275602|ref|ZP_00651887.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Dixon]
gi|71899419|ref|ZP_00681578.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|71899499|ref|ZP_00681656.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|170729590|ref|YP_001775023.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa M12]
gi|71163493|gb|EAO13210.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Dixon]
gi|71730719|gb|EAO32793.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|71730828|gb|EAO32900.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
gi|167964383|gb|ACA11393.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa M12]
Length = 127
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 4 YRTPLKNARGLGAAKVGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++I
Sbjct: 64 WNAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALALQTMVRFIAVLGAVASVFAVVRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|28198268|ref|NP_778582.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa Temecula1]
gi|182680905|ref|YP_001829065.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xylella fastidiosa M23]
gi|28056338|gb|AAO28231.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Xylella fastidiosa Temecula1]
gi|182631015|gb|ACB91791.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Xylella fastidiosa M23]
gi|307579373|gb|ADN63342.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 127
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 69/123 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L RG+G+AK GTGHF+ QR TAIA + ++F+AF + Y V+ ++
Sbjct: 4 YRTPLKNARGLGAAKVGTGHFVLQRLTAIALVLLGVWFLAFLLTLLGVDYAAAVAAVAKP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ ++ H QLG+QV++EDYIH L + M +L + +F++++I
Sbjct: 64 WNAILLIGFLVAAFWHAQLGLQVVLEDYIHNSFLALTLQTMVRFIAVLGAVASVFAVVRI 123
Query: 125 AIL 127
A+
Sbjct: 124 ALG 126
>gi|83953491|ref|ZP_00962213.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. NAS-14.1]
gi|83842459|gb|EAP81627.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. NAS-14.1]
Length = 123
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT HF + +++A + I F+ F YE+I++ S
Sbjct: 5 TDRKRAMGLGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGSALGGTYEEIIAYYSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I H G+QV+IEDY+H K+ + M +C +F++ +IA+
Sbjct: 65 AIVAALTLIVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAVGVFAIARIAL 123
>gi|260431520|ref|ZP_05785491.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter lacuscaerulensis ITI-1157]
gi|260415348|gb|EEX08607.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter lacuscaerulensis ITI-1157]
Length = 123
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT HF + +++A + + F+ F PY+ ++ S
Sbjct: 5 TDRKRALGLGSAKSGTQHFWAMKVSSVALLILVPLFVFTFGPTLGQPYDVMLDYYSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L H G QV+IEDY+H L K+ + + +C +F++ +IA+
Sbjct: 65 AIVAALTLAVGFKHFADGAQVMIEDYVHGTLEKV-LIILVTCLSYGAAAVGIFAIARIAL 123
>gi|319777840|ref|YP_004134270.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317171559|gb|ADV15096.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 129
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 71/124 (57%)
Query: 3 FDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLS 62
+R+ L RVRG+GSAK GT F+ +R T+ A + +I+ +A I+ P + ++ V+
Sbjct: 5 RSIRTPLARVRGLGSAKHGTETFMLERLTSAALLILVIYIVAVVIRLSGEPRDVVIRVVG 64
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ VA + + VHM+LGMQ IIEDY H +LK + L N F + + F++L
Sbjct: 65 SIYVAPALIAFILVNCVHMRLGMQSIIEDYCHATVLKSVLLIANWLFCWAVALASFFAVL 124
Query: 123 KIAI 126
I+
Sbjct: 125 VISF 128
>gi|85374259|ref|YP_458321.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erythrobacter litoralis HTCC2594]
gi|84787342|gb|ABC63524.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erythrobacter litoralis HTCC2594]
Length = 128
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 75/122 (61%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+SLGRVRG+GSAK+G H+I QRFTAI N+ +++ +A FI + Y+ + L++
Sbjct: 5 TSLGRVRGLGSAKEGAHHWIVQRFTAIGNVVLMLWLVASFILLPNLSYDTVSGWLASPIP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A+ M L +S+ H +LG+ V+IEDY+H LK L + + +F +F + ++A+
Sbjct: 65 AAAMVLLIVSVFWHARLGLTVLIEDYVHEAGLKFAALAALNLAAVAGGVFGIFCIARLAL 124
Query: 127 LG 128
G
Sbjct: 125 GG 126
>gi|83943850|ref|ZP_00956307.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. EE-36]
gi|83845097|gb|EAP82977.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sulfitobacter sp. EE-36]
Length = 123
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT HF + +++A + I F+ F YE+I++ S
Sbjct: 5 TDRKRAMGMGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGAALGGTYEEIIAYYSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I H G+QV+IEDY+H K+ + M +C +F++ +IA+
Sbjct: 65 AIVAALTLIVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAVGVFAIARIAL 123
>gi|312112887|ref|YP_004010483.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311218016|gb|ADP69384.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 130
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 2 DFDMRSSLGRVRGMGSA--KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS 59
R+ L +VRG+GSA GT HF QR TA++N+ + F + + AP + +
Sbjct: 3 STTYRTELKKVRGLGSAIGGPGTDHFWAQRLTAVSNLFVVAFLVYTGLTLAGAPLGDVKA 62
Query: 60 VLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ A L IS ++HM+LGMQV +E+Y+ LK+ FLF+N+ FV+++ + +
Sbjct: 63 FFGHPFNAIASILVVISTAIHMRLGMQVPVEEYMP-HGLKVPFLFLNTFFVIVIAVVGVL 121
Query: 120 SLLKIAIL 127
S+LK+ +
Sbjct: 122 SILKLFLG 129
>gi|217979668|ref|YP_002363815.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocella silvestris BL2]
gi|217505044|gb|ACK52453.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocella silvestris BL2]
Length = 129
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 1 MDFDMRSSLGRVRG--MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIV 58
M D SS VR +GSAK G T++A +P I F+ + Y +
Sbjct: 1 MAHDKSSSRSPVRKGFLGSAKSGASDAWSMHVTSVALLPLAIGFVWVMLSLMHKDYAGVK 60
Query: 59 SVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ L + A ++ L ++ HM+LGMQ II+DYIH K L N CF + + +
Sbjct: 61 AELGHPLPAIVLLLFILAGCWHMKLGMQSIIDDYIHAPHAKEWALVGNFCFSAAIALASV 120
Query: 119 FSLLKIAI 126
F+++K+ +
Sbjct: 121 FAVVKLGL 128
>gi|84515884|ref|ZP_01003245.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Loktanella vestfoldensis SKA53]
gi|84510326|gb|EAQ06782.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Loktanella vestfoldensis SKA53]
Length = 123
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT H + T++A + I F+ F APY ++++
Sbjct: 5 TDRKRAVGMGSAKSGTHHHWQMMVTSVALLVLIPLFVFTFGTILGAPYAEVIAYYQRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L + H +LG+Q +IEDY+H K +FM C F +F++++IA+
Sbjct: 65 AVVAILTMLVGFFHFRLGVQTVIEDYVHGFARKAAIIFM-ICLSYAAAGFAVFAIIRIAL 123
>gi|254463366|ref|ZP_05076782.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2083]
gi|206679955|gb|EDZ44442.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium HTCC2083]
Length = 123
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT HF + +++A + + FI F + Y ++++
Sbjct: 5 TDRKRATGMGSAKSGTHHFWSMKVSSVALLFLLPMFIFTFGGTLGSNYAEVMTYFGRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L T+ H G QV+IEDY+H + K++ + + +C +F++ K+A+
Sbjct: 65 AIVAALTTLVGFKHFNDGAQVLIEDYVHGLMQKVLIILL-TCLSYGAAAVGIFAIAKLAL 123
>gi|144898838|emb|CAM75702.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Magnetospirillum gryphiswaldense MSR-1]
Length = 127
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+RS +GR RG+GSAK G GH +A+ IP ++F+ + A + + ++
Sbjct: 3 TLRSPIGRARGLGSAKSGMGHHWSTIVSAVGLIPLSLWFVVSIARLAGADHAVFTAWIAK 62
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A+++ L H LG+ ++IEDY+ + K L LL + S+LK
Sbjct: 63 GPNAALLILTIGLTCYHASLGLSMVIEDYVTCKAKKFAALLATRLIAALLAVGMSVSILK 122
Query: 124 IAILG 128
+AI G
Sbjct: 123 VAIGG 127
>gi|254448797|ref|ZP_05062254.1| succinate dehydrogenase, hydrophobic membrane anchor protein [gamma
proteobacterium HTCC5015]
gi|198261638|gb|EDY85926.1| succinate dehydrogenase, hydrophobic membrane anchor protein [gamma
proteobacterium HTCC5015]
Length = 120
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 9 LGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVAS 68
+ + G+GSAKDGT HF+ QR T IA +P +++ G A + ++N A+
Sbjct: 1 MSKAYGLGSAKDGTHHFMIQRLTGIALVPLMLWLTFSIACLGGADLASVRDFIANPLNAT 60
Query: 69 IMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
++ T+S+ H LGMQV++EDY+ L++ + + L + + ++LK+A+
Sbjct: 61 LLICLTVSVFYHSSLGMQVVLEDYLRPHWLRLTVQILINFANFALAVVSILAILKLAVAA 120
>gi|16127758|ref|NP_422322.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter crescentus CB15]
gi|13425260|gb|AAK25490.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Caulobacter crescentus CB15]
Length = 139
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L R RGMG+++ G HFI +R + +A P ++ +K AP++ +V ++
Sbjct: 12 FRTPLSRARGMGASRHGVSHFITERVSGLALAPLTVWGAYAALKQVRAPHDVVVQWMAQP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ L I+ VH+Q +QV+IEDYI K + N +L +FS+LK+
Sbjct: 72 VNAVLLSLLLIAALVHLQSAVQVVIEDYIERFTTKTALVIGNLFVCVLAGAVGVFSILKV 131
Query: 125 AIL 127
A+
Sbjct: 132 ALT 134
>gi|221236579|ref|YP_002519016.1| succinate dehydrogenase membrane anchor subunit [Caulobacter
crescentus NA1000]
gi|220965752|gb|ACL97108.1| succinate dehydrogenase membrane anchor subunit [Caulobacter
crescentus NA1000]
Length = 151
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L R RGMG+++ G HFI +R + +A P ++ +K AP++ +V ++
Sbjct: 24 FRTPLSRARGMGASRHGVSHFITERVSGLALAPLTVWGAYAALKQVRAPHDVVVQWMAQP 83
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ L I+ VH+Q +QV+IEDYI K + N +L +FS+LK+
Sbjct: 84 VNAVLLSLLLIAALVHLQSAVQVVIEDYIERFTTKTALVIGNLFVCVLAGAVGVFSILKV 143
Query: 125 AIL 127
A+
Sbjct: 144 ALT 146
>gi|326387616|ref|ZP_08209222.1| succinate dehydrogenase subunit D [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207662|gb|EGD58473.1| succinate dehydrogenase subunit D [Novosphingobium nitrogenifigens
DSM 19370]
Length = 118
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
RG+GS+ G H++ R TA+ N+ I + I D + + S L+ A+ + L
Sbjct: 2 RGLGSSHQGAHHWLLTRLTAVGNLILIPYLIVSLALLPDFEWATVHSWLAKPVPATALIL 61
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I+ H +LG+QV++EDY+H KI + + F + S+++IA+
Sbjct: 62 TFINTFYHARLGIQVMLEDYVHEEAGKIAAWLLVNIVPFAAGAFGVVSVIRIALGAA 118
>gi|83592539|ref|YP_426291.1| succinate dehydrogenase subunit D [Rhodospirillum rubrum ATCC
11170]
gi|83575453|gb|ABC22004.1| succinate dehydrogenase subunit D [Rhodospirillum rubrum ATCC
11170]
Length = 128
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 4 DMRSSLGRVRGMGSAKDGTG-HFIKQRFTAIANIPFIIFFIA-FFIKYGDAPYEQIVSVL 61
+RS LGR RG+GSAK G H++ +R AIA +P ++F+ I A Y QI + +
Sbjct: 2 SLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFM 61
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ A++M L H LG+ VIIEDY+ +K +F + L + S+
Sbjct: 62 AVPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSI 121
Query: 122 LKIAILG 128
LK+ G
Sbjct: 122 LKLTFGG 128
>gi|295687607|ref|YP_003591300.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Caulobacter segnis ATCC 21756]
gi|295429510|gb|ADG08682.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter segnis ATCC 21756]
Length = 139
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ L R RG+GS+ G HFI +R + +A P ++ + +K A + + L +
Sbjct: 12 FRTPLSRARGLGSSHHGVSHFITERVSGLALAPLSLWGVYSALKLIGADQHTVAAWLGHP 71
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A ++ L +S VH+ +QV+IEDY+H K + N +L +FS+LK+
Sbjct: 72 LNAVLLLLLLLSALVHLSNAVQVVIEDYVHRFTSKSALVIGNLFVCVLAGAIGIFSILKV 131
Query: 125 AIL 127
A+
Sbjct: 132 ALT 134
>gi|254486788|ref|ZP_05099993.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. GAI101]
gi|214043657|gb|EEB84295.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. GAI101]
Length = 123
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT HF + +++A + I F+ F YE+I++ +
Sbjct: 5 TDRKRAVGMGSAKSGTAHFWAMKVSSVALLILIPLFVFTFGAALGGTYEEILAYYAKPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I L H G+QV+IEDY+H K+ + M +C +F+++++A+
Sbjct: 65 ALIAALTIAVGFKHFNDGVQVLIEDYVHGLSQKVAIILM-TCLSYGAAAAGVFAIIRLAL 123
>gi|84684218|ref|ZP_01012120.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84667971|gb|EAQ14439.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2654]
Length = 125
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
++ RV G+GSAK GTGHF +QR +AIA + + F+ F YE + + ++
Sbjct: 3 YQTDRARVEGLGSAKQGTGHFWEQRISAIALLFLVPLFVFPFAYNLGDGYEAVRAAYAHP 62
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A I ++ +H+ G+QV++EDY+H R ++ + L + ++++++I
Sbjct: 63 VNAIIAIAFFLTAFLHLFQGVQVVVEDYVHGRAG-MVIIIATRLLCTLFALVGVYAVIRI 121
Query: 125 AILG 128
++
Sbjct: 122 SLGA 125
>gi|56695274|ref|YP_165622.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria pomeroyi DSS-3]
gi|56677011|gb|AAV93677.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria pomeroyi DSS-3]
Length = 123
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT HF + +++A + I F+ F P++ ++ S
Sbjct: 5 TDRKRAVGMGSAKTGTAHFWAMKVSSVALLILIPLFVFTFGPMLGEPHQAVLDYFSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L + H G QV+IEDY+H + KI + + C LF++ +IA+
Sbjct: 65 AIVAALTLVVGFKHFADGAQVLIEDYVHGLMQKI-LIILVICLSYAAAATGLFAIARIAL 123
>gi|91205982|ref|YP_538337.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii RML369-C]
gi|157826654|ref|YP_001495718.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii OSU 85-389]
gi|122425295|sp|Q1RHB6|DHSD_RICBR RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|91069526|gb|ABE05248.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii RML369-C]
gi|157801958|gb|ABV78681.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia bellii OSU 85-389]
Length = 125
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D R+ + + + GSAK G+ H++ QR TAI + ++ + F + ++ I+
Sbjct: 1 MTYDFRAEIVKAKNTGSAKSGSHHWLLQRITAIILVLCSLWLLYFTLANKNSDVNIIIWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + I+ H LGMQV+IEDYI L+ + F +L I+ + +
Sbjct: 61 LKRPINLIPLLIAVITSLYHAMLGMQVVIEDYISCNKLRNTLIIAVKLFSILTIVAFIVA 120
Query: 121 LL 122
+
Sbjct: 121 VF 122
>gi|163744266|ref|ZP_02151626.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanibulbus indolifex HEL-45]
gi|161381084|gb|EDQ05493.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanibulbus indolifex HEL-45]
Length = 120
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT HF + +++A + I F+ F YE+I++ +
Sbjct: 2 TDRKRALGLGSAKTGTAHFWAMKVSSLALLVLIPLFVFTFGSALGGTYEEILAYYARPFP 61
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I H G+QV+IEDY+H KI + M + +F++ K+A+
Sbjct: 62 AIVAALTLIVGFKHFNDGVQVLIEDYVHGLANKIAIIVM-TIISYGAAAVGVFAIAKLAL 120
>gi|114799518|ref|YP_761917.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomonas neptunium ATCC 15444]
gi|114739692|gb|ABI77817.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hyphomonas neptunium ATCC 15444]
Length = 129
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 63/118 (53%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ RG+GSAK GT H I+ R TAIA + + + IK A YE ++ +
Sbjct: 8 TPTKAARGLGSAKSGTQHHIRLRVTAIALAFLVPWCLYAVIKASGAGYEGALAWVGQPIN 67
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A+++ L ++S HM+LGMQVIIEDYI + L +N+ + I ++++I
Sbjct: 68 ATLLILTAAAVSYHMRLGMQVIIEDYIAKTATRTTLLILNTFAAYAMFIAVAMAVVQI 125
>gi|209967179|ref|YP_002300094.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Rhodospirillum centenum SW]
gi|209960645|gb|ACJ01282.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Rhodospirillum centenum SW]
Length = 132
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 69/126 (54%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
D R+ LGRVRG+GSA+ G+ H+ R A AN+P +++ + I A + ++V+ L
Sbjct: 7 DAGFRTPLGRVRGLGSARSGSAHWFGYRMLAAANVPLLLWLLVSLIPLAGAGHAEVVAFL 66
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
A +M L +I H GM ++EDY+ +L+K + + LLL + F++
Sbjct: 67 QRPLNAVLMLLTIGAIFYHAAYGMMEVLEDYVQAKLVKTLAAALIKGGCLLLAVASAFAV 126
Query: 122 LKIAIL 127
LKIA+
Sbjct: 127 LKIALA 132
>gi|296285023|ref|ZP_06863021.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citromicrobium bathyomarinum JL354]
Length = 128
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 69/123 (56%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+S+GRVRG+GSA +G H++ QRFTAI N+ ++F + F+ Y + LS+
Sbjct: 5 TSIGRVRGLGSAHEGAHHWLLQRFTAIGNLVLVLFLLVSFLLLPAYDYGTVTGWLSSPIA 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A+ + L +S H +LG+QV+IEDYIH + + + + + +F +F + IA
Sbjct: 65 AAALILLIVSTFWHARLGLQVLIEDYIHQGGSRFALIALLNLVAVAGAVFGIFCIASIAF 124
Query: 127 LGT 129
G
Sbjct: 125 AGA 127
>gi|163734149|ref|ZP_02141590.1| succinate dehydrogenase [Roseobacter litoralis Och 149]
gi|161392685|gb|EDQ17013.1| succinate dehydrogenase [Roseobacter litoralis Och 149]
Length = 123
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT H ++ A + I F+ F A YE++ + +
Sbjct: 5 TDRKRAVGLGSAKSGTEHHWSMTVSSGALLILIPLFVFTFGPMLGASYEEVTAYFARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I GL I H G+Q ++EDY+H K+ + +C + F L++++++A+
Sbjct: 65 AVIAGLTIIVTFKHFAGGVQALLEDYVHGVAQKVA-IVAMTCVSYAAMGFGLYAIVRLAL 123
>gi|241518523|ref|YP_002979151.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862936|gb|ACS60600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 127
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 70/125 (56%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
M + LGRVRG+GSAK GT ++ ++ + +A + I I + +V+ + +
Sbjct: 1 MTTPLGRVRGLGSAKGGTRPYVLKQASGLALGILTPYLIGIGIYLLGRDRDFVVASIGSF 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ + + +VHM +GM+ IIEDY+H + K++ LF+NS F L+ + C+F++L++
Sbjct: 61 WIGPALLAFILLSAVHMDIGMRTIIEDYVHGHMRKLVILFLNSAFTWLVCLLCVFAILRM 120
Query: 125 AILGT 129
Sbjct: 121 MFDAA 125
>gi|159045406|ref|YP_001534200.1| hypothetical protein Dshi_2866 [Dinoroseobacter shibae DFL 12]
gi|157913166|gb|ABV94599.1| hypothetical protein Dshi_2866 [Dinoroseobacter shibae DFL 12]
Length = 123
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+ R G+GSAK GT H + +++ + + F+ F + APYE++++ L+
Sbjct: 3 FMTDRKRAMGLGSAKSGTEHHWHMQVSSVGLLILVPLFLFTFGRVVGAPYEEVIAYLARP 62
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A + L + H + G+ V IEDY K + +C + LF++ ++
Sbjct: 63 FPAIVTALMLVVGFDHFRHGVTVAIEDYAQGTTRK-ALIIAMTCVSYGAMATGLFAIARL 121
Query: 125 AI 126
A+
Sbjct: 122 AL 123
>gi|110678933|ref|YP_681940.1| hypothetical protein RD1_1627 [Roseobacter denitrificans OCh 114]
gi|109455049|gb|ABG31254.1| suc [Roseobacter denitrificans OCh 114]
Length = 123
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT H ++ A + I F+ F A Y+++ + +
Sbjct: 5 TDRKRAVGLGSAKSGTEHHWSMTVSSGALLILIPLFVFTFGPMLGASYDEVTAYFARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I GL I H G+Q ++EDY+H K+ + +C + F L++++++A+
Sbjct: 65 AVIAGLTIIVTFKHFAGGVQALLEDYVHGVAQKVA-IVAMTCVSYAAMGFGLYAVVRLAL 123
>gi|94496885|ref|ZP_01303459.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphingomonas sp. SKA58]
gi|94423561|gb|EAT08588.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphingomonas sp. SKA58]
Length = 129
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 68/103 (66%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ +GRVRG+GSAK+G H++ QR+TA+ N+ +++ + I Y+ +V+ ++N V
Sbjct: 5 TGIGRVRGLGSAKEGAHHWLTQRYTAVGNLLLVLWLLFSLISLPGLDYDSVVAWIANPLV 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCF 109
A M L +SI +H++LGMQV++EDY+H + L + + + + +
Sbjct: 65 AVPMMLMLVSIFLHLRLGMQVMLEDYVHDKGLNFLCILLLNFY 107
>gi|6649875|gb|AAF21610.1|AF018287_4 SdhD [papaya bunchy top disease rickettsia]
Length = 125
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D R+ + + + GSAK G+ H++ QR TAI ++ I F + ++ I+
Sbjct: 1 MTYDFRAEILKAKNTGSAKSGSHHWLLQRITAIILALCSVWLIYFTLANKNSDVNIIIWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + I+ H LGMQV+IEDYI L+ + + F +L I+ + +
Sbjct: 61 LKRPINLVPLLIAVITSLYHAMLGMQVVIEDYIGCNKLRNTLVIVVKLFSILTIVAFIVA 120
Query: 121 LL 122
+
Sbjct: 121 VF 122
>gi|114571386|ref|YP_758066.1| succinate dehydrogenase subunit D [Maricaulis maris MCS10]
gi|114341848|gb|ABI67128.1| succinate dehydrogenase subunit D [Maricaulis maris MCS10]
Length = 123
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
D R+ +VRG+G++ G H+I R T+IA F+ K AP S+
Sbjct: 3 DYRTPTAKVRGLGASGHGASHWIVHRVTSIALFFLAPVFVWMLAK-SGAP-ASAAEFFSS 60
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
A A I L + HM+LGMQVIIEDY+H K + + N+ L L + F+LLK
Sbjct: 61 PAGAIITLLTLTAGLSHMRLGMQVIIEDYVHKHGTKTLLMLANTFLTLGLWLVTAFALLK 120
Query: 124 IAI 126
+A+
Sbjct: 121 LAL 123
>gi|114707254|ref|ZP_01440152.1| succinate dehydrogenase subunit D, membrane anchor protein
[Fulvimarina pelagi HTCC2506]
gi|114537450|gb|EAU40576.1| succinate dehydrogenase subunit D, membrane anchor protein
[Fulvimarina pelagi HTCC2506]
Length = 113
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
MG++ GT HF +QR TAIAN+ F+ + A ++ N + ++ L
Sbjct: 1 MGASSGGTEHFWQQRLTAIANLVLFTTFLIIVLTLIGADITEVRETFGNPIIGTLAALMI 60
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAIL 127
+S VHM+LGMQ I+EDY+H + K N+ F L+ L++++K++
Sbjct: 61 VSACVHMRLGMQTILEDYVHGPM-KWPLAIANTFFACLIAALGLYAIVKMSFG 112
>gi|254512425|ref|ZP_05124492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium KLH11]
gi|221536136|gb|EEE39124.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacteraceae bacterium KLH11]
Length = 123
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT HF + +++A + + FI F PY+ ++ S
Sbjct: 5 TDRKRAVGLGSAKSGTAHFWSMKVSSVALLILVPLFIFTFGPILGQPYDVVLDYYSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L + H G QV+IEDY+H + K+ + + C LF++ +IA+
Sbjct: 65 AIVAALTLLVGFKHFADGAQVMIEDYVHGTMEKV-LIILTICLSYGAAAAGLFAIARIAL 123
>gi|170746892|ref|YP_001753152.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium radiotolerans JCM 2831]
gi|170653414|gb|ACB22469.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylobacterium radiotolerans JCM 2831]
Length = 139
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 75/124 (60%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
+R+ RVRG+G + G H+ QR TA+AN+ ++ F+ K Y + +++
Sbjct: 13 SIRTPRARVRGLGVSHHGADHWWLQRLTAVANVVLMLSFVVIIAKMAGRGYAEARLLVAT 72
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
V+ ++ L +S++VHM+LGMQVIIEDY+H KI +F N+ + +++ + CL+++L+
Sbjct: 73 PLVSILLILALLSVTVHMRLGMQVIIEDYVHAPSTKIAAVFANNAYAVVVAVACLYAVLR 132
Query: 124 IAIL 127
I
Sbjct: 133 IGFG 136
>gi|254464400|ref|ZP_05077811.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium Y4I]
gi|206685308|gb|EDZ45790.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium Y4I]
Length = 123
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMG+AK GT H + +A+A + + F+ F YE+I + S
Sbjct: 5 TDRKRAVGMGAAKSGTAHHWSMQVSAVALLILVPLFVFTFGSALGGSYEEITAYYSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +H + G Q++IEDY+H ++ + + C + ++L+++A+
Sbjct: 65 ALVAVLTIWVGMMHFKSGAQIMIEDYVHGLKGRLA-IILVKCLSYAVAATSAYALIRLAL 123
>gi|167648794|ref|YP_001686457.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter sp. K31]
gi|167351224|gb|ABZ73959.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Caulobacter sp. K31]
Length = 135
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 66/126 (52%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
R+ + R RG+G+++ G HFI +R + +A IP ++ + ++ ++ ++
Sbjct: 10 FRTPMSRARGLGASRHGVAHFITERVSGVALIPLALWGLFAALRLASLGFDGAAEWVAIP 69
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A+++ L + +H++ +QV+IEDYI LK + + N +L + + ++LK+
Sbjct: 70 CNAALLCLLLVVALIHLKGAVQVVIEDYIADFTLKTVLVLANLFVCVLGGVLGVVAILKV 129
Query: 125 AILGTL 130
A G
Sbjct: 130 AFTGAF 135
>gi|126725052|ref|ZP_01740895.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2150]
gi|126706216|gb|EBA05306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacterales bacterium HTCC2150]
Length = 123
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
+ R GMGSAK+GT HF ++IA + FI F D Y + + +
Sbjct: 3 FMTDRKRANGMGSAKEGTHHFWSMTVSSIALAILMPLFIFNFGPMLDESYADVQAHFARP 62
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
A + GL I H ++G Q +IEDY+ KI + S + LF+L I
Sbjct: 63 YPAILTGLTLIVAFTHFKMGAQTMIEDYVKGGARKIT-IIAVSLLSYAAMATGLFALASI 121
Query: 125 AI 126
A+
Sbjct: 122 AL 123
>gi|3273340|dbj|BAA31211.1| succinate dehydrogenase cytochrome b small subunit [Rhodospirillum
rubrum]
Length = 127
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA-FFIKYGDAPYEQIVSVLS 62
+RS LGR R H++ +R AIA +P ++F+ I A Y QI + ++
Sbjct: 2 SLRSPLGRARRGFRQGGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFMA 61
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
A++M L H LG+ VIIEDY+ +K +F + L + S+L
Sbjct: 62 VPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSIL 121
Query: 123 KIAILG 128
K+ G
Sbjct: 122 KLTFGG 127
>gi|238650697|ref|YP_002916550.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
peacockii str. Rustic]
gi|238624795|gb|ACR47501.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
peacockii str. Rustic]
Length = 125
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + + H LGM+V+IEDYI L+ + + F ++ I+ + +
Sbjct: 61 LKKPFNVVALLITVVISLYHAMLGMRVVIEDYISCHKLRNTLIIIVQLFCIVTIVAFVVA 120
Query: 121 LL 122
L
Sbjct: 121 LF 122
>gi|254438569|ref|ZP_05052063.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 307]
gi|198254015|gb|EDY78329.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 307]
Length = 123
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT H + +++A I F+ + Y + +
Sbjct: 5 TDRKRAVGMGSAKSGTEHHWQMIVSSVALTGLIPLFVFTYGAALGMSYADASAYYARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + L + +H + G+Q +IEDY+ K + + C +F++++IA+
Sbjct: 65 SIVGILTLLVGFLHFKGGVQTLIEDYVQGFARK-ALIIGSICLSYGAAAAGVFAIVRIAL 123
>gi|157828043|ref|YP_001494285.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia rickettsii str. 'Sheila Smith']
gi|165932740|ref|YP_001649529.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
rickettsii str. Iowa]
gi|157800524|gb|ABV75777.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia rickettsii str. 'Sheila Smith']
gi|165907827|gb|ABY72123.1| succinate dehydrogenase membrane anchor subunit [Rickettsia
rickettsii str. Iowa]
Length = 125
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWA 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + + H LGM+V+IEDYI L+ + + F ++ I+ + +
Sbjct: 61 LKKPFNVVALLITVVISLYHAMLGMRVVIEDYISCHKLRNTLIIIVQLFCIVTIVAFVVA 120
Query: 121 LL 122
L
Sbjct: 121 LF 122
>gi|254449958|ref|ZP_05063395.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 238]
gi|198264364|gb|EDY88634.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Octadecabacter antarcticus 238]
Length = 123
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT H + +++A I F+ + YE + +
Sbjct: 5 TDRKRAVGMGSAKSGTEHHWQMIVSSVALTGLIPLFVFTYGAALGMSYEDAAAYYARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + L + +H + G+Q +IEDY H K + + C +F++++IA+
Sbjct: 65 SIVGILTLLVGFLHFKGGVQTLIEDYFHGFARK-ALIIGSICLSYAAAAVGVFAIVRIAL 123
>gi|126734840|ref|ZP_01750586.1| succinate dehydrogenase [Roseobacter sp. CCS2]
gi|126715395|gb|EBA12260.1| succinate dehydrogenase [Roseobacter sp. CCS2]
Length = 123
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT H + T++A + I FI F APYE++++
Sbjct: 5 TDRKRASGMGSAKTGTEHHWQMMVTSVALLILIPMFIFTFGWILGAPYEEVIAYYQRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFL 103
A + L + H +LG+Q +IEDY+H K +
Sbjct: 65 AVVAILTLLVGFFHYRLGVQTLIEDYVHGFARKAAII 101
>gi|157964194|ref|YP_001499018.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia massiliae MTU5]
gi|157843970|gb|ABV84471.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia massiliae MTU5]
Length = 125
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++++ + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAAIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + + H LGM+V+IEDYI L+ + + F ++ I+ + +
Sbjct: 61 LKKPFNVVALLITVVISLYHAMLGMRVVIEDYISCYKLRNTLIIIVQLFCIVTIVAFVVA 120
Query: 121 LL 122
+
Sbjct: 121 IF 122
>gi|241518580|ref|YP_002979208.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862993|gb|ACS60657.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 127
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
M + LGRVRG+GSA GT ++ ++ + IA + + I + +V + +
Sbjct: 1 MTTPLGRVRGLGSAHGGTKAYVLKQASGIAIGVLTPYIVGLGIYLFGRDRDFLVLSVGSF 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
V + I ++HM++GM+ IIEDY+H + K+ LF+NS F + + C+F+++ +
Sbjct: 61 WVGPPLLAFVILSAIHMEIGMRTIIEDYVHGHMRKLALLFLNSAFTWSVCLLCVFAIVLM 120
Query: 125 AI 126
Sbjct: 121 MF 122
>gi|153868749|ref|ZP_01998496.1| succinate dehydrogenase membrane anchor subunit [Beggiatoa sp. PS]
gi|152074660|gb|EDN71494.1| succinate dehydrogenase membrane anchor subunit [Beggiatoa sp. PS]
Length = 128
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK-YGDAPYEQIVSVLSN 63
++ L +VR GSA++GT HFI QR +AIA +P +++F+A I A + +V +
Sbjct: 4 FQTPLSQVRLWGSAREGTSHFIAQRLSAIALVPLLLWFVAAIIFFIVKADHASLVEWIRL 63
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ L + H G+Q I+ DY+H ++K + + + FV+ + + + ++L+
Sbjct: 64 YWNTELLILLILLTFHHAHAGLQEILVDYVHNEIIKAIVMTLMKFFVIGITVASVLAVLR 123
Query: 124 IAILG 128
IA+ G
Sbjct: 124 IALGG 128
>gi|15892092|ref|NP_359806.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia conorii str. Malish 7]
gi|20137872|sp|Q92J98|DHSD_RICCN RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|15619215|gb|AAL02707.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia conorii str. Malish 7]
Length = 126
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMLW 60
Query: 61 -LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + + + H LGM+V+IEDYI Y L+ + + F ++ I+ +
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLRNTLIIIVQLFCIVTIVAFVV 120
Query: 120 SLL 122
+L
Sbjct: 121 ALF 123
>gi|326404268|ref|YP_004284350.1| succinate dehydrogenase membrane anchor subunit [Acidiphilium
multivorum AIU301]
gi|325051130|dbj|BAJ81468.1| succinate dehydrogenase membrane anchor subunit [Acidiphilium
multivorum AIU301]
Length = 122
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS+LGR RGMG+AK G H+ QR TA+A +P ++ + + A +++ ++
Sbjct: 1 MRSALGRARGMGAAKSGVHHWWAQRLTALALLPLALYAVLSVLLLEGASQAEMLRYMAEP 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ I++ H+QLG+QV+IEDYI ++ + + + S+LK+
Sbjct: 61 WNGVLFLALVIALFYHLQLGLQVVIEDYIRSEGKRLAVMLAMRATAGFFGLLAIISVLKL 120
Query: 125 AI 126
+
Sbjct: 121 SF 122
>gi|239947121|ref|ZP_04698874.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsia endosymbiont of Ixodes scapularis]
gi|239921397|gb|EER21421.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsia endosymbiont of Ixodes scapularis]
Length = 125
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I I+ I F + + I+
Sbjct: 1 MVYDFKAKIVKAKNSGSAKSGSHHWLLQRATGIILALCSIWLIYFTLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + H LGM+V+IEDY+ Y L+ + + F ++ I + +
Sbjct: 61 LKKPFNVIALLITVAISLYHAMLGMRVVIEDYVSYHKLRNTLIIIVQLFCIVTIAAFVVA 120
Query: 121 LL 122
+
Sbjct: 121 MF 122
>gi|84500177|ref|ZP_00998443.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola batsensis HTCC2597]
gi|84392111|gb|EAQ04379.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola batsensis HTCC2597]
Length = 123
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMG++K GT H + + ++IA + + F+ F + YE++V+ S
Sbjct: 5 TDRKRAVGMGASKTGTAHHWQMQISSIALLILVPLFVLNFGAILGSSYEEVVAHYSRPYP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L + H + G Q+ IEDYIH ++ + + + +FSLL++A+
Sbjct: 65 AIVAALTLLVGMTHFKNGAQMAIEDYIHGLAGRL-SIIGVTILAYAIAGVGIFSLLRLAL 123
>gi|148260874|ref|YP_001235001.1| succinate dehydrogenase, cytochrome b subunit [Acidiphilium cryptum
JF-5]
gi|146402555|gb|ABQ31082.1| succinate dehydrogenase subunit D [Acidiphilium cryptum JF-5]
Length = 125
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MRS+LGR RGMG+AK G H+ QR TA+A +P ++ + + A +++ ++
Sbjct: 4 MRSALGRARGMGAAKSGVHHWWAQRLTALALLPLALYAVLSVLLLEGASQAEMLRYMAEP 63
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ I++ H+QLG+QV+IEDYI ++ + + + S+LK+
Sbjct: 64 WNGVLFLALVIALFYHLQLGLQVVIEDYIRSEGKRLAVMLAMRATAGFFGLLAIISVLKL 123
Query: 125 AI 126
+
Sbjct: 124 SF 125
>gi|229586367|ref|YP_002844868.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia africae ESF-5]
gi|228021417|gb|ACP53125.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia africae ESF-5]
Length = 126
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFMLTNKNNDINIIMLW 60
Query: 61 -LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + + + H LGM+V+IEDYI Y L+ + + F ++ I+ +
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLRNTLIIIVQLFCIVTIVAFVV 120
Query: 120 SLL 122
L
Sbjct: 121 VLF 123
>gi|119385744|ref|YP_916799.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus
denitrificans PD1222]
gi|119376339|gb|ABL71103.1| succinate dehydrogenase subunit D [Paracoccus denitrificans PD1222]
Length = 127
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 8 SLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVA 67
R RG+G+A GTG + QR +A +P +++F A + ++V+ L+ +
Sbjct: 8 PFARARGLGAAGHGTGRWWAQRVSAAGLVPLVLWFALALAGGAAADHAKLVAWLAAPLNS 67
Query: 68 SIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
+M L ++ H LG+QV+ EDYIH + + ++F + S+L+IA
Sbjct: 68 GLMILLLMAGFHHAALGLQVLAEDYIHS-GARFVAAAAIQLACFAGVVFGIASVLRIA 124
>gi|34580877|ref|ZP_00142357.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia sibirica 246]
gi|28262262|gb|EAA25766.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia sibirica 246]
Length = 126
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + GSAK G+ H++ QR T I ++ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKNSGSAKSGSHHWLLQRVTGIILALCSVWLIYFTLTNKNNDINIIMLW 60
Query: 61 -LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
L + + + H LGM+V+IEDYI Y L+ + + F ++ I+ +
Sbjct: 61 ELKKPFNVVALLITVVISLYHAMLGMRVVIEDYISYHKLRNTLIIIVQLFCIVTIVAFVV 120
Query: 120 SLL 122
L
Sbjct: 121 VLF 123
>gi|255262499|ref|ZP_05341841.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thalassiobium sp. R2A62]
gi|255104834|gb|EET47508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thalassiobium sp. R2A62]
Length = 123
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 47/102 (46%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMGSAK GT H ++ A + + FI F YE++++ S
Sbjct: 5 TDRKRAAGMGSAKQGTEHHWSMMVSSAALLILVPLFIFTFGAALGGTYEEVIAYYSRPVP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
A I L +H + G+QV+IEDY+H KI + M
Sbjct: 65 AVIAVLTLWVGFMHFKSGVQVLIEDYVHGVARKIAIIAMIIL 106
>gi|163738940|ref|ZP_02146353.1| malate dehydrogenase [Phaeobacter gallaeciensis BS107]
gi|163741816|ref|ZP_02149206.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Phaeobacter gallaeciensis 2.10]
gi|161384989|gb|EDQ09368.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Phaeobacter gallaeciensis 2.10]
gi|161387745|gb|EDQ12101.1| malate dehydrogenase [Phaeobacter gallaeciensis BS107]
Length = 123
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R GMG+AK GT H + ++I + + F+ F YE+I + +
Sbjct: 5 TDRKRAVGMGAAKSGTAHHWSMQVSSIGLLILVPLFVFTFGSALGGSYEEITAYYARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +H + G Q++IEDY+H ++ + + +C + ++L+++A+
Sbjct: 65 ALVALLTIWVGMMHFKSGAQIMIEDYVHGFAGRLT-IILVTCLSYAVAAVSAYALIRLAL 123
>gi|149913138|ref|ZP_01901672.1| malate dehydrogenase [Roseobacter sp. AzwK-3b]
gi|149813544|gb|EDM73370.1| malate dehydrogenase [Roseobacter sp. AzwK-3b]
Length = 123
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R G+G+A GT H +A+ + F+ FF + ++++++ S+ A+
Sbjct: 5 TARKRAEGLGAAHSGTEHHWYMTVSAVGLALIVPLFLFFFGRALGGTHDEVMATFSHPAM 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L H + G Q +IEDY K+ + + LI +F++LKIA+
Sbjct: 65 AILTLLVIFVGLQHFRKGAQTMIEDYARGMTRKV-LIIAVTVLSYGLIATGVFAVLKIAL 123
>gi|15604004|ref|NP_220519.1| succinate dehydrogenase hydrophobic membrane anchor protein (sdhD)
[Rickettsia prowazekii str. Madrid E]
gi|729337|sp|P41086|DHSD_RICPR RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|409935|gb|AAA18326.1| putative hydrophobic subunit of succinate dehydrogenase [Rickettsia
prowazekii]
gi|3860695|emb|CAA14596.1| SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN (sdhD)
[Rickettsia prowazekii]
gi|292571720|gb|ADE29635.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia prowazekii Rp22]
Length = 125
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + +K G+ H++ QR T + + I F + I+
Sbjct: 1 MIYDFKAEIIKAKNSSFSKSGSHHWLLQRVTGVILALCSFWLIYFMFTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
I+ + H LGM+V+IEDYI+ L+ + + F +L I+ + +
Sbjct: 61 FKKPFNIVILLITVTISLYHSVLGMRVVIEDYINCHKLRNTLIIIVKLFCILTIVSFVVA 120
Query: 121 LL 122
+
Sbjct: 121 IF 122
>gi|157803314|ref|YP_001491863.1| hypothetical protein A1E_00650 [Rickettsia canadensis str. McKiel]
gi|157784577|gb|ABV73078.1| hypothetical protein A1E_00650 [Rickettsia canadensis str. McKiel]
Length = 125
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D + + + + GSAK G+ H++ QR TAI I+ I F + + I+
Sbjct: 1 MVYDFKVEIVKAKASGSAKSGSHHWLLQRVTAIILALCSIWLIYFTLTNKSSDLSIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + I H +G+Q++IEDYI L + + F L+ I + +
Sbjct: 61 LKKPFNVVALLITVIISLYHAMIGVQIVIEDYIRCNKLLNTLIIVVKLFCLVTIAAFVTA 120
Query: 121 LL 122
+
Sbjct: 121 MF 122
>gi|157825306|ref|YP_001493026.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia akari str. Hartford]
gi|157799264|gb|ABV74518.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia akari str. Hartford]
Length = 125
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D + + + + GSAK G+ ++ QR T I I+ I F + + I+
Sbjct: 1 MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWE 60
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + H LGM+V+IEDYI L + + + F ++ I + +
Sbjct: 61 LKKPFNVVALLITVAISLYHSMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVA 120
Query: 121 LLKI 124
+ I
Sbjct: 121 MFYI 124
>gi|189184863|ref|YP_001938648.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Ikeda]
gi|189181634|dbj|BAG41414.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Ikeda]
Length = 129
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 65/123 (52%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN 63
++++SL ++ + + K H+ QR +AI +P +++ + F ++V ++
Sbjct: 5 NLQNSLNTIKSLSTDKYCVQHWWYQRLSAILMLPLLVWLVFFGKAIVQKSPVELVELVKY 64
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
++ L I++ H +G++VIIEDY++ ++ + + + CF + ++ + S++
Sbjct: 65 PYNVLMIILLLITMFFHAAIGLKVIIEDYVNNLSVRYLLIVLVQCFTFVTVVAGIISIIL 124
Query: 124 IAI 126
+ I
Sbjct: 125 LCI 127
>gi|89068122|ref|ZP_01155539.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola granulosus HTCC2516]
gi|89046361|gb|EAR52418.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanicola granulosus HTCC2516]
Length = 123
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G+GSAK GT + ++ A + ++ FI F YE+ V
Sbjct: 5 TDRKRASGLGSAKRGTEKHWQMSLSSAALVVLVVLFIFTFGGALGMGYEEAVVYYHRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L +H + G+Q++I+DY K + +C + +F++ ++A+
Sbjct: 65 AIVALLTIAVGLLHFRGGVQILIDDYTRGLTRK-ALIVGTACLSYAALAAGVFAIARLAL 123
>gi|126740504|ref|ZP_01756191.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. SK209-2-6]
gi|126718305|gb|EBA15020.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseobacter sp. SK209-2-6]
Length = 123
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R G G++ GT H + +A+A + F+ + +E++++ S
Sbjct: 5 TARKRAEGKGASGTGTEHHWYMQASAVALAFLVPAFLYVVGSAIGSSHEEVLATFSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL + +H G Q++IEDY + K + I +F+L KIA+
Sbjct: 65 AILTGLTLYAGVMHFNKGAQMMIEDYARGSMRK-ALIIFVIGLSYTTIATGVFALAKIAL 123
>gi|86138976|ref|ZP_01057547.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseobacter sp. MED193]
gi|85824207|gb|EAQ44411.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseobacter sp. MED193]
Length = 123
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R G G+A GT H + +A+A + FI E++++ +
Sbjct: 5 TARKRAVGKGAAGTGTEHHWYMQVSAVALAFLVPAFIYIVGSAIGGTQEEVLATFARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL +H G Q++IEDY + K + I +F+L KIA+
Sbjct: 65 AILTGLTLFVGVMHFNKGAQMMIEDYARGSMRK-ALIMFVIGLSYATIATGVFALAKIAL 123
>gi|89053301|ref|YP_508752.1| succinate dehydrogenase subunit D [Jannaschia sp. CCS1]
gi|88862850|gb|ABD53727.1| succinate dehydrogenase subunit D [Jannaschia sp. CCS1]
Length = 123
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ RV G+GSAK GT T++A + FF+A + + +++ L
Sbjct: 5 TDRKRVSGLGSAKGGTAQHWTMTVTSVALLILTPFFLAIIGSALGSDHADVIATLGKPVP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I+ + H++ GMQ ++EDY H K+ + + L L +L++IA+
Sbjct: 65 ALIVAAYLVVGMHHLRYGMQTLLEDYTHGLTKKVSIIV-TTILSYGLAAGGLVALMQIAL 123
>gi|67459553|ref|YP_247177.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia felis URRWXCal2]
gi|75536047|sp|Q4UKC3|DHSD_RICFE RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|67005086|gb|AAY62012.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia felis URRWXCal2]
Length = 120
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Query: 1 MDFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV 60
M +D ++ + + + G+ H++ QR T I I+ I F + + I+
Sbjct: 1 MVYDFKAEIVKAKN-----SGSHHWLLQRVTGIILALCSIWLIYFTLTNKNNDINIIMWE 55
Query: 61 LSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
L + + H LGM+V+IEDY+ L+ + + F ++ I + +
Sbjct: 56 LKKPFNVVALLITVAISLYHAMLGMRVVIEDYVSCHKLRNTLIVIVQLFCIVTIAAFVVA 115
Query: 121 LL 122
+
Sbjct: 116 MF 117
>gi|148284920|ref|YP_001249010.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Boryong]
gi|146740359|emb|CAM80792.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Orientia tsutsugamushi str. Boryong]
Length = 129
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 65/125 (52%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
++++SL ++ + + K H+ QR +AI +P +++ + F ++V ++
Sbjct: 3 AQNLQNSLNTIKSLSTDKYCVQHWRYQRLSAILMLPLLVWLVFFGKAIVQKSPVELVELV 62
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++ L I++ H +G++VIIEDY++ ++ + + + CF + ++ + S+
Sbjct: 63 KYPYNVLMIILLLITMFFHAAIGLKVIIEDYVNNLAVRYLLIVLVQCFTFVTVVAGIISI 122
Query: 122 LKIAI 126
+ + I
Sbjct: 123 ILLCI 127
>gi|46203231|ref|ZP_00051839.2| COG2142: Succinate dehydrogenase, hydrophobic anchor subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 131
Score = 97.1 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 2 DFDMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVL 61
MR+ RV+G+G++ G GHF QR T +N ++ F+ Y Q V+++
Sbjct: 11 ALSMRTPRARVKGLGASGHGAGHFWLQRLTGASNALLMLAFVVIIALMAGRTYPQAVALV 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQ 86
S+ VA I+ L +S++ HM++GMQ
Sbjct: 71 SHPLVAIILILAVVSVATHMRIGMQ 95
>gi|149201369|ref|ZP_01878344.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseovarius sp. TM1035]
gi|149145702|gb|EDM33728.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Roseovarius sp. TM1035]
Length = 123
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R G G+A GT HF + + + I F+ F + ++++ S+ A+
Sbjct: 5 TARKRAEGKGAAGTGTEHFWYMKLSGVGLALIIPVFLVAFGRALGGDRAEVLAAFSHPAM 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL H G Q +IEDY H + + + LI LF+L KIA+
Sbjct: 65 AILTGLVIFFGLRHYASGAQTMIEDYSHGSTRR-GLIIAVTVLSYGLIATGLFALAKIAL 123
>gi|218679248|ref|ZP_03527145.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Rhizobium etli CIAT 894]
Length = 81
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 54/81 (66%)
Query: 48 KYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNS 107
Y APY +V LSN VA +MGL IS +HM+LGMQVIIEDY+H KI L +N+
Sbjct: 1 AYAGAPYADVVRALSNPFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNT 60
Query: 108 CFVLLLIIFCLFSLLKIAILG 128
F +L+ CLF++LKIA +G
Sbjct: 61 FFAILIAGLCLFAILKIAFVG 81
>gi|85706757|ref|ZP_01037849.1| putative succinate dehydrogenase, hydrophobic membrane
anchorprotein [Roseovarius sp. 217]
gi|85668815|gb|EAQ23684.1| putative succinate dehydrogenase, hydrophobic membrane
anchorprotein [Roseovarius sp. 217]
Length = 123
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R G G+A GT HF + + + I F+ F + ++++ ++ +
Sbjct: 5 TARKRAEGKGAAGTGTEHFWYMKLSGVGLALIIPVFLVAFGRALGGDRTEVMAAFAHPGM 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL H G Q +IEDY H + + + + LI LF+L KIA+
Sbjct: 65 AILTGLVIFFGLRHYASGAQTMIEDYSHGSMRR-GLIIAVTVLSYGLIATGLFALAKIAL 123
>gi|119383320|ref|YP_914376.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Paracoccus denitrificans PD1222]
gi|2494618|sp|Q59660|DHSD_PARDE RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|975317|gb|AAA75176.1| succinate dehydrogenase hydrophobic membrane anchor [Paracoccus
denitrificans]
gi|119373087|gb|ABL68680.1| succinate dehydrogenase subunit D [Paracoccus denitrificans PD1222]
Length = 129
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ G+GSA +GT H +A+A F+ + EQ+++
Sbjct: 5 TPRKAAEGLGSAHEGTQHHWAMTVSAVALTVLTPLFMIVVARAIGLSQEQLLAYFGRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I L I VH G +++I+DY K +F F +I +++L ++ +
Sbjct: 65 ALITALFVIVGMVHFIKGTRIMIDDYFQGGTRKAAIIFSVI-FGWAVIAAAVYALARMGL 123
Query: 127 LGTL 130
+
Sbjct: 124 GAIV 127
>gi|126730328|ref|ZP_01746139.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sagittula stellata E-37]
gi|126709061|gb|EBA08116.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sagittula stellata E-37]
Length = 123
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R +G+GS + GT + T++A + + F+ F YE + + +
Sbjct: 5 TDRKRAQGLGSGRTGTQFHKRMLVTSMALVVLVPLFVFSFGSGFGGSYEDVQAFFARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A I L + +H Q IEDY+H K++ + + F +LI LF+L+++A+
Sbjct: 65 AIITALMLVVGVIHFNGEAQEAIEDYVHGTTGKLLAV-AVTAFSYVLIAAGLFALVRLAL 123
>gi|260425803|ref|ZP_05779783.1| succinate dehydrogenase hydrophobic membrane anchor [Citreicella
sp. SE45]
gi|260423743|gb|EEX16993.1| succinate dehydrogenase hydrophobic membrane anchor [Citreicella
sp. SE45]
Length = 123
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G GSA G H +++A + +I F + Y+ ++ +S
Sbjct: 5 TDRKRAVGKGSAHTGAEHHWFMIVSSVALAFMMPAWIFIFGNALGSGYDAALATMSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I +H G +V+IEDY K+ + F ++I LF+L+KIA+
Sbjct: 65 AILTALVLIVGMMHFHKGGRVMIEDYTAGTTRKV-LIMAYVAFSYVMIACGLFALVKIAL 123
>gi|51473327|ref|YP_067084.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia typhi str. Wilmington]
gi|81390259|sp|Q68XP0|DHSD_RICTY RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|51459639|gb|AAU03602.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rickettsia typhi str. Wilmington]
Length = 125
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 42/102 (41%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G H++ QR T + + I F + I+ I+ + H
Sbjct: 21 GAHHWLLQRVTGVVLALCSFWLIYFMFTNKNNDINIIMWEFKKPFNIVILLITVTISLYH 80
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
LGM+V+IEDYI+ L+ + + F +L I+ + ++
Sbjct: 81 SVLGMRVVIEDYINCHKLRNTLIIIVKLFCILTIVAFIVAIF 122
>gi|77464555|ref|YP_354059.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides 2.4.1]
gi|126463395|ref|YP_001044509.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Rhodobacter sphaeroides ATCC 17029]
gi|221640466|ref|YP_002526728.1| Succinate dehydrogenase subunit D [Rhodobacter sphaeroides KD131]
gi|332559448|ref|ZP_08413770.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides WS8N]
gi|77388973|gb|ABA80158.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides 2.4.1]
gi|126105059|gb|ABN77737.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides ATCC
17029]
gi|221161247|gb|ACM02227.1| Succinate dehydrogenase subunit D [Rhodobacter sphaeroides KD131]
gi|332277160|gb|EGJ22475.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides WS8N]
Length = 123
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R GMG+A GT +A+ I F+ E+++ + S+
Sbjct: 5 TARKRAEGMGAAHHGTDRHWYMIVSAVGLAVLIPIFVYIVGNAIGEGRERVLEIFSHPFN 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL H G ++IEDY +++ + S F + LF+L KIA+
Sbjct: 65 AILSGLVLFFGMRHFAEGSTMMIEDYWQGVPRRLLVICAQS-FAYGVAAIGLFALAKIAL 123
>gi|146276144|ref|YP_001166303.1| hypothetical protein Rsph17025_0087 [Rhodobacter sphaeroides ATCC
17025]
gi|145554385|gb|ABP68998.1| succinate dehydrogenase subunit D [Rhodobacter sphaeroides ATCC
17025]
Length = 123
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
++ R GMG+A GT +A+ I F+ E+++ + S+
Sbjct: 5 TARKRAEGMGAAHHGTDRHWYMIVSAVGLAVLIPIFVYVVGNAIGEGRERVLEIFSHPFN 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + GL H G ++IEDY +++ + S F + LF+L KIA+
Sbjct: 65 AILSGLVLFFGMRHFAEGSTMMIEDYWQGVPRRLLVICAQS-FAYGVAAIGLFALAKIAL 123
>gi|294676289|ref|YP_003576904.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter capsulatus SB 1003]
gi|294475109|gb|ADE84497.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter capsulatus SB 1003]
Length = 133
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G G++ GT HF +++A + FI F Q+ + +
Sbjct: 5 TDRKRAVGKGASGSGTEHFWWMTMSSVALAFLVPAFIFVFGHAIGMDQAQLQAYFARPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L TI H G QV++EDY L K + +F+ S L+ L++L K+
Sbjct: 65 AILTALVTIVGMRHFAKGAQVMLEDYTQGSLRKGLVIFVYSL-SWLISALVLYALAKMMF 123
Query: 127 LGT 129
L
Sbjct: 124 LAA 126
>gi|114764871|ref|ZP_01444053.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pelagibaca bermudensis HTCC2601]
gi|114542757|gb|EAU45780.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseovarius sp. HTCC2601]
Length = 123
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G GSA G H +++A + ++ F + + Y+ + +S
Sbjct: 5 TDRKRAVGKGSAHAGAEHHWFMIVSSVALAFMLPTWLIVFGRALGSGYDAALDTMSRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I VH Q G + +IEDY K+ + + F L+I +F+L+KIA+
Sbjct: 65 AILTALVLIVGMVHFQKGARTMIEDYTGGTTRKL-LIMAFAGFAYLMIACGIFALVKIAL 123
>gi|296445360|ref|ZP_06887318.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylosinus trichosporium OB3b]
gi|296257121|gb|EFH04190.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylosinus trichosporium OB3b]
Length = 126
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S + G+ H + R +A A P + + F YE + L A +
Sbjct: 15 SDRSGSLHALAMRHSARALAPLGLLSVWFIANLSGQSYEAARAHLGRPLPAITLIAFICI 74
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
S H +LGM+ I+EDY+H LK L +N + + S++ IA
Sbjct: 75 ASYHARLGMETIVEDYVHDEALKARALQINKWLTVAIAASWTLSIMIIA 123
>gi|254475941|ref|ZP_05089327.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria sp. R11]
gi|214030184|gb|EEB71019.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ruegeria sp. R11]
Length = 123
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R +G+GS + GT T+ +P + F+ YE++++ S
Sbjct: 5 TDRKRAQGLGSGRTGTKTHWNAIVTSTLLVPAVPVFVFTVGAGLGGTYEEVLAYFSRPVP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
A + L I I +H ++ IEDY+H ++ + + F LI L +L+K+A+
Sbjct: 65 AILTALSMIVIVLHTLHEVREAIEDYMHGVSERMATIAA-TAFAYSLIAAGLLALIKLAL 123
>gi|83950427|ref|ZP_00959160.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseovarius nubinhibens ISM]
gi|83838326|gb|EAP77622.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Roseovarius nubinhibens ISM]
Length = 98
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
+ ++ + + FI F AP+ ++V+ + A + L I H + G Q+
Sbjct: 1 MKLSSAGLLVLVPLFIFTFGPMLGAPHAEVVAYFARPFPALVAALTIIVGFKHFRDGAQI 60
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
++EDY+H KI + + + LF++ KIA+
Sbjct: 61 MLEDYVHGTAQKI-CIMALTLLSYGAMAAGLFAIAKIAL 98
>gi|304320538|ref|YP_003854181.1| hypothetical protein PB2503_04822 [Parvularcula bermudensis
HTCC2503]
gi|303299440|gb|ADM09039.1| hypothetical protein PB2503_04822 [Parvularcula bermudensis
HTCC2503]
Length = 112
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
T H+I QRFTA+ IP +I+ + I + +Q LS AS+M + +S+ HM
Sbjct: 6 TKHYIAQRFTALIQIPLVIWLVFGVIGHAGDTQDQFRVWLSEPLTASLMIIFILSVFFHM 65
Query: 82 QLGMQVIIEDYIHYRLLKIMF 102
LGM +++DYIH + +
Sbjct: 66 HLGMGEVVDDYIHKPSSRSLL 86
>gi|259415142|ref|ZP_05739064.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter sp. TrichCH4B]
gi|259349052|gb|EEW60806.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Silicibacter sp. TrichCH4B]
Length = 123
Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
T H + ++I + + F+ F YE++++ A I GL + +H+
Sbjct: 20 THHHWQMMVSSILLVFLVPAFVITFGLGLGGTYEEVLAYYGRPVPAIITGLTLVVGIIHL 79
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
QV +EDY+H K+ + + F +I LF+L+K+A+
Sbjct: 80 MREAQVAVEDYMHGLAEKLTLI-AVAAFSYTMIAAGLFALVKLAL 123
>gi|99078502|ref|YP_611760.1| succinate dehydrogenase subunit D [Ruegeria sp. TM1040]
gi|99035640|gb|ABF62498.1| succinate dehydrogenase subunit D [Ruegeria sp. TM1040]
Length = 123
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
T H + ++I + + F+ F YE++++ A I GL + +H+
Sbjct: 20 THHHWQMMVSSILLVVLVPAFVITFGLGLGGTYEEVLAYYGRPVPAIITGLTLVVGIIHL 79
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
QV +EDY+H K+ + + +I LF+L+K+A+
Sbjct: 80 MREAQVAVEDYMHGLAEKLTLI-AVAALSYTMIAAGLFALVKLAL 123
>gi|260576580|ref|ZP_05844568.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter sp. SW2]
gi|259021184|gb|EEW24492.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rhodobacter sp. SW2]
Length = 123
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ G GSA GT T+I + F+ F + P+E +V+
Sbjct: 5 TDRKTANGKGSAHSGTHEHKDMALTSIGLAFLMPTFLFIFGRTLGQPHEVVVATFGRPIP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
A + GL HM G+ ++ DY +++ +F+N+ L+ L++L+++A
Sbjct: 65 AIVTGLMVFLAMRHMMHGVGSVLADYTRGTARRLLTIFVNAL-AYLITAAVLYALIRMA 122
>gi|310814647|ref|YP_003962611.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ketogulonicigenium vulgare Y25]
gi|308753382|gb|ADO41311.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ketogulonicigenium vulgare Y25]
Length = 127
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 7 SSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAV 66
+ R G G+++ GT I T+ + + + P++Q + +
Sbjct: 5 TDRKRAVGNGASRTGTFDHIFMTSTSYGLLVLVPCLVWVLGNALFLPFDQARAYVGRPFP 64
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
++GL + H +G Q+++EDY+ +I L LLI L +L+++A+
Sbjct: 65 LIVLGLTLVVGLRHFAVGAQMMLEDYLQGFAREITVLIA-RGLSWLLIATGLLALVRLAL 123
Query: 127 L 127
Sbjct: 124 G 124
>gi|329847591|ref|ZP_08262619.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis biprosthecum C19]
gi|328842654|gb|EGF92223.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis biprosthecum C19]
Length = 127
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S K G G ++ +RFT+IA IP ++ Y+ ++ ++ + +
Sbjct: 16 SEKHGAGEWLAERFTSIALIPLTLWAAYAAFTIAGTGYDGALAFVAKPFNILAIAATMLI 75
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
+ HM +G++VII+DYI + LF+
Sbjct: 76 TAWHMYMGVKVIIDDYIGKPGTRGFLLFLT 105
>gi|294085394|ref|YP_003552154.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664969|gb|ADE40070.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Candidatus Puniceispirillum marinum IMCC1322]
Length = 121
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G H+ QR +A+A + + +F+ + G Y + L+ A + L +
Sbjct: 15 SGLSHWRWQRMSAVAVLMLMAYFVFVVTRIGTLDYAAARAFLATPYQALALALLVVIGVF 74
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
H LG V+IEDY+ + + + S + ++ L ++ +A
Sbjct: 75 HGTLGAHVVIEDYVPVKSGRHALILTVSIIMAIIAGASLIAIASVAF 121
>gi|225629574|ref|ZP_03787601.1| succinate dehydrogenase, hydrophobic membrane [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225591572|gb|EEH12585.1| succinate dehydrogenase, hydrophobic membrane [Wolbachia
endosymbiont of Muscidifurax uniraptor]
Length = 116
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPYEQIVSVLSNVAVASIMGL 72
M + + H+ QR +A+ + +FI F Y D+ +++ +
Sbjct: 1 MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVV 60
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I H LGMQV+ EDYIH L+I + + I F++
Sbjct: 61 LLFCIFWHAVLGMQVVCEDYIHSVPLRIFTITCIKYLSSITYITLAFTIF 110
>gi|302381552|ref|YP_003817375.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brevundimonas subvibrioides ATCC 15264]
gi|302192180|gb|ADK99751.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brevundimonas subvibrioides ATCC 15264]
Length = 134
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 49/113 (43%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S + G G + ++ A +P ++ + Y+ ++ ++ A+++ +
Sbjct: 14 SERHGAGEWTLEKILLAALMPLGLWVASTAFTLSGQGYDIVLQWFASPVNAALLAATALI 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
+ L +VIIEDYIH K + + + + L +F ++++A+
Sbjct: 74 LFGFASLAWKVIIEDYIHVAGTKALLIGLVNLICLAAAAASVFFIVRLALGSA 126
>gi|58698190|ref|ZP_00373111.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630886|ref|YP_002727677.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia sp. wRi]
gi|58535271|gb|EAL59349.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592867|gb|ACN95886.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia sp. wRi]
Length = 118
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPYEQIVSVLSNVAVASIMGL 72
M + + H+ QR +A+ + +FI F Y D+ +++ +
Sbjct: 1 MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVV 60
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I H LGMQV+ EDYIH L+I + + I F++
Sbjct: 61 LLFCIFWHAVLGMQVVCEDYIHSVPLRIFTITCIKYLSSITYITLAFTIF 110
>gi|42521019|ref|NP_966934.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410760|gb|AAS14868.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 118
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPYEQIVSVLSNVAVASIMGL 72
M + + H+ QR +A+ + +FI F Y D+ +++ +
Sbjct: 1 MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVV 60
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I H LGMQV+ EDYIH L+I + + I F++
Sbjct: 61 LLFCIFWHAVLGMQVVCEDYIHSVPLRIFTITCIKYLSSITYITLAFTIF 110
>gi|323138216|ref|ZP_08073288.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocystis sp. ATCC 49242]
gi|322396468|gb|EFX98997.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylocystis sp. ATCC 49242]
Length = 131
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 41/109 (37%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S +G+ H R +A A P + + P E + + + A ++ +
Sbjct: 20 SDHEGSVHARFMRLSAYALAPLGALSAWWLVGVVGKPLEGVRAEIGRPVPAIVLLAFAVI 79
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
+H GM II DY+H LK N + + ++L IA
Sbjct: 80 GMIHAYHGMNEIIVDYVHDEALKERAHKANKWAAIAIAAAWTLAILLIA 128
>gi|330813448|ref|YP_004357687.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486543|gb|AEA80948.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Pelagibacter sp. IMCC9063]
Length = 111
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
+I QR TA+ +P +I+F++ FI + ++ N S + + + HM++G
Sbjct: 9 WILQRVTAVILLPLLIWFLSVFIGLVQKDFTTVIIFFENNINFSFSVVFLVLVFSHMKIG 68
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
M I EDYI K + + S F +L + + SL+ I
Sbjct: 69 MGEIFEDYIQDSRYKSVANLIISIFATVLPLITIVSLILIKF 110
>gi|190571455|ref|YP_001975813.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|190357727|emb|CAQ55177.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
Length = 121
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIK--YGDAPY---EQIVSVLSNVAVASIMGLGTIS 76
H+ QR +A+ + +FI F Y D+P E++ +++ +
Sbjct: 8 VHHWWIQRVSAVILLFLFPWFIYSFSCTFYVDSPLSFNEKLFQAINHPLELLFFVILVFC 67
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
I H LGMQV+ EDYI LL+I + + I F
Sbjct: 68 IFWHAVLGMQVVCEDYIDSVLLRIFTITCIKYLSSITYIVLAF 110
>gi|11466548|ref|NP_044797.1| succinate:ubiquinone oxidoreductase subunit 4 [Reclinomonas
americana]
gi|1706431|sp|P80482|DHSD_RECAM RecName: Full=Succinate dehydrogenase membrane anchor subunit;
AltName: Full=Succinate dehydrogenase, subunit IV
gi|2258378|gb|AAD11912.1| succinate:ubiquinone oxidoreductase subunit 4 [Reclinomonas
americana]
Length = 120
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAV--ASIMGLGTI 75
K G+ H+ QRF AI P I++ + Y ++ L+ + + + + ++
Sbjct: 12 KSGSMHWWLQRFLAILLAPIILYLLFDVAIYIGQQSDPTVMMFLNRIFNHNSIFIFITSV 71
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
+ H++ GM+VIIEDY+H +I+ +F+ + ++
Sbjct: 72 ILIWHVRGGMEVIIEDYVHGEKTRIVSIFLIRVIAIEIM 110
>gi|254418739|ref|ZP_05032463.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brevundimonas sp. BAL3]
gi|196184916|gb|EDX79892.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Brevundimonas sp. BAL3]
Length = 139
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 51/113 (45%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S + G G ++ +R + +P ++ + A Y+ + +N A ++ L +
Sbjct: 19 SERHGAGEWLAERVLLVVVLPLGLWVASTAFTLTGAGYDAVQDWFANRLNAGLLALTAVV 78
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
++ + +VI+EDY+ + + + + L+L +F ++++A+
Sbjct: 79 FFGYVSVAWKVILEDYVPQPGTRKALVALLNLVFLVLAAASVFFIVRMALGSA 131
>gi|57238922|ref|YP_180058.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
gi|58578854|ref|YP_197066.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
gi|57161001|emb|CAH57907.1| putative succinate dehydrogenase cytochrome b small subunit
[Ehrlichia ruminantium str. Welgevonden]
gi|58417480|emb|CAI26684.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Welgevonden]
Length = 116
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS-----VLSNVAVASIMGLG 73
H++ QR TA +PF ++F F+++ + + V N
Sbjct: 2 GSSVYHWLSQRLTAFIMLPFSVWFFYKFLRFLSIVCKSVSELDLSFVELNTIDVIASVCF 61
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
I H LG+QVI+EDY+ +L++ L + V + ++F +F++ I++
Sbjct: 62 FIIAFYHAILGLQVILEDYVQSSVLRVSILLLIKGIVTVTLLFLIFAIFNISL 114
>gi|58584742|ref|YP_198315.1| succinate dehydrogenase subunit D sdhD, hydrophobic membrane anchor
protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58419058|gb|AAW71073.1| Succinate dehydrogenase subunit D sdhD, hydrophobic membrane anchor
protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 121
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPY-----EQIVSVLSNVAVASIMGL 72
+ + ++ R +A+ + + +FI F A E++ +++ +
Sbjct: 4 SGNAVHYWWVHRISAVILLFLLPWFIYSFSYAFYANNSLSFNEKLFQAINHPLDLLFFVV 63
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I H LGMQV+ EDYIH L+I + + I F++
Sbjct: 64 LLFCIFWHAVLGMQVVCEDYIHSIPLRIFTITCIKYLSSITYIVLAFTIF 113
>gi|329891126|ref|ZP_08269469.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Brevundimonas diminuta ATCC 11568]
gi|328846427|gb|EGF95991.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Brevundimonas diminuta ATCC 11568]
Length = 131
Score = 65.5 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S + G G + ++ +A +P ++ ++ A Y +V+ + A ++ + +
Sbjct: 14 SERHGAGEWKLEKLALLALMPLGLWALSTGFTLAGADYGAVVAWFGSTLNAGLLAVTAVV 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
+ L +VI+EDY+ + + +++ L+L +F ++++A+
Sbjct: 74 FCLFASLAWKVILEDYVPGSS-RPALILVSNLIFLVLAAASVFFIVRLALGSA 125
>gi|302342523|ref|YP_003807052.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Desulfarculus baarsii DSM 2075]
gi|301639136|gb|ADK84458.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Desulfarculus baarsii DSM 2075]
Length = 122
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP----YEQIVSVLSNVAVASIM 70
+GS + G + QR + +A + + I Y P Y+++ L++ +
Sbjct: 4 LGSGRTGAFEWFFQRVSGVALVAL-LGLHFILIHYTGEPGPVTYDKVAPRLASPLYKAWE 62
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
L + H G++++I+DY+H + L ++ L L+IF +++
Sbjct: 63 LLFLVLALYHAMNGVKLVIDDYVHNSTWRSCLLGLSWLVALALLIFGALTII 114
>gi|68171572|ref|ZP_00544947.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Ehrlichia chaffeensis str. Sapulpa]
gi|88658456|ref|YP_507708.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Ehrlichia chaffeensis str. Arkansas]
gi|67999013|gb|EAM85689.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Ehrlichia chaffeensis str. Sapulpa]
gi|88599913|gb|ABD45382.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Ehrlichia chaffeensis str. Arkansas]
Length = 118
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNVAVA--SIMGLGT 74
H++ QR TA IP ++F+ + + ++ +SN++ I+
Sbjct: 4 HSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILLCFF 63
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
IS H LG+QVI+EDYIH +L+ + V+L ++F F +L +LG
Sbjct: 64 ISAFYHAVLGVQVILEDYIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLG 117
>gi|111073628|emb|CAL29490.1| SdhD; succinate dehydrogenase [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 121
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPY---EQIVSVLSNVAVASIMGLG 73
++ ++ QR +A+ + +FI F+ Y +A E+++ + + +
Sbjct: 5 RNSVHYWWVQRVSAVVLLLLFPWFIYLGFYAFYANASLLFNEKLLQAIDHPLELLFFVIL 64
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I H LG+QV+ EDYIH +K + + I F++
Sbjct: 65 LFYIFWHAVLGIQVVCEDYIHSIPIKFFVITCIKYLSSVTYIVLAFTIF 113
>gi|58616912|ref|YP_196111.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Gardel]
gi|58416524|emb|CAI27637.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Ehrlichia ruminantium str. Gardel]
Length = 116
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS-----VLSNVAVASIMGLG 73
H++ QR TA +PF ++F F+++ + V N
Sbjct: 2 GSSVYHWLSQRVTAFIVLPFSVWFFYKFLRFLSIVCRSVSELDLSFVELNTIDVIASVCF 61
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
I H LG+QVI+EDY+ +L++ L + V + ++F +F++ I++
Sbjct: 62 FIIAFYHAVLGLQVILEDYVQSSVLRVSILLLIKGIVTVTLLFLVFAIFNISL 114
>gi|73542010|ref|YP_296530.1| succinate dehydrogenase subunit D [Ralstonia eutropha JMP134]
gi|72119423|gb|AAZ61686.1| succinate dehydrogenase subunit D [Ralstonia eutropha JMP134]
Length = 121
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + F + F+ A YE + SN + I L +S+
Sbjct: 15 AHYGLKDWLAQRVTAVIMVVFTVILAIAFLLSNGASYEAWAGLFSNQWMKIITFLTILSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ ++++ + +++ +
Sbjct: 75 LYHAWIGVRDIWMDYVKPMAVRLVLQVLTILWLVGCAGYAA 115
>gi|113868592|ref|YP_727081.1| succinate dehydrogenase (hydrophobic anchor subunit) [Ralstonia
eutropha H16]
gi|33320237|gb|AAQ05855.1| SdhD protein [Cupriavidus necator]
gi|113527368|emb|CAJ93713.1| succinate dehydrogenase (hydrophobic anchor subunit) [Ralstonia
eutropha H16]
Length = 121
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + F + F+ A YE + SN + I L +S+
Sbjct: 15 AHYGLKDWLAQRVTAVIMVVFTVVLAIAFLLSNGASYEAWAGLFSNQWMKIITFLTILSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ ++++ + +++ +
Sbjct: 75 LYHAWIGVRDIWMDYVRPMAVRLVLQVLTILWLVGCAGYAA 115
>gi|88607526|ref|YP_505560.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Anaplasma phagocytophilum HZ]
gi|46361035|gb|AAS89250.1| succinate dehydrogenase subunit D [Anaplasma phagocytophilum]
gi|88598589|gb|ABD44059.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Anaplasma phagocytophilum HZ]
Length = 109
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 24 HFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQL 83
H+ QR TA+ +P IF + + + + + L++ ++ L + H L
Sbjct: 8 HWWMQRMTAVVMLPVPIFLVKALLV---SDFATGLLDLTHGYKGALTALFLMPAFYHGVL 64
Query: 84 GMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
G+QV++EDY+ L+ + F +L C+FSL+ +
Sbjct: 65 GVQVVLEDYVRSDALRAFLITFIKLFAVLT--VCVFSLVVL 103
>gi|194290223|ref|YP_002006130.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
sdhc [Cupriavidus taiwanensis LMG 19424]
gi|193224058|emb|CAQ70067.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Cupriavidus taiwanensis LMG 19424]
Length = 121
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + F + F+ A YE + +N + I L +S+
Sbjct: 15 AHYGLKDWLAQRVTAVVMVVFTVILAIAFLLSNGASYEAWAGLFANQWMKIITFLTILSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ ++++ + +++ +
Sbjct: 75 LYHAWIGVRDIWMDYVKPMAVRLVLQVLTILWLVGCAGYAA 115
>gi|156934785|ref|YP_001438701.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Cronobacter sakazakii ATCC BAA-894]
gi|156533039|gb|ABU77865.1| hypothetical protein ESA_02625 [Cronobacter sakazakii ATCC BAA-894]
Length = 115
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R T+I +II+ I FF GD YE S+ L ISI
Sbjct: 10 RNGVHDFILVRATSIVMTLYIIYMIGFFAMNGDLTYEVWTGFFSSTFTKVFTLLTLISIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DY+ + L++ +++ +I+ +
Sbjct: 70 VHTWIGMWQVLTDYVKHLALRLFLQLAIVVALVVYVIYGFVVV 112
>gi|262277892|ref|ZP_06055685.1| succinate dehydrogenase, hydrophobic membrane anchor protein [alpha
proteobacterium HIMB114]
gi|262224995|gb|EEY75454.1| succinate dehydrogenase, hydrophobic membrane anchor protein [alpha
proteobacterium HIMB114]
Length = 109
Score = 62.8 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
++ QR A+ +PF+++F+ F Y V L+N I+ L + HM++G
Sbjct: 8 WLLQRVAAVILLPFLVWFLFHFDNLMTFSYSDAVMFLNNKIYVGILSLVFLLAFFHMRIG 67
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
M I EDYIH +K + + L++ I + +++ + +
Sbjct: 68 MGEIFEDYIHNEKVKKIASGLILLISLIIPIAAISAMVILGL 109
>gi|260597121|ref|YP_003209692.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Cronobacter turicensis z3032]
gi|260216298|emb|CBA29265.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Cronobacter turicensis z3032]
Length = 115
Score = 62.8 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R T+I +II+ I FF GD YE S+ L +SI
Sbjct: 10 RNGVHDFILVRATSIVMTLYIIYMIGFFAMNGDLTYEVWTGFFSSTFTKVFTLLTLVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DY+ + L++ +++ +I+ +
Sbjct: 70 VHTWIGMWQVLTDYVKHLALRLFLQLAIVVALVVYVIYGFVVV 112
>gi|152979976|ref|YP_001353197.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Janthinobacterium sp. Marseille]
gi|151280053|gb|ABR88463.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Janthinobacterium sp. Marseille]
Length = 121
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 9 LGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVAS 68
+GR R + A G ++ QR TAI + + + + F+ D YE + +
Sbjct: 6 IGRHRLVVGAHYGVRDWLAQRITAIVMVLYTLVLLIAFLTATDFSYEGWAGLFAQQWFKM 65
Query: 69 IMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
+ +S+ H +GM+ I DYI +++ +++
Sbjct: 66 FTFVTFLSLFYHAWVGMRNIWMDYIKPVSIRLALQVATILWLVACA 111
>gi|82701991|ref|YP_411557.1| succinate dehydrogenase, cytochrome b subunit [Nitrosospira
multiformis ATCC 25196]
gi|82410056|gb|ABB74165.1| succinate dehydrogenase subunit D [Nitrosospira multiformis ATCC
25196]
Length = 120
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%)
Query: 12 VRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMG 71
VR + A G ++ QR TA +I+ + Y ++ N +
Sbjct: 6 VRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWMRVASF 65
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
L +S+ H +GM+ I+ DY+H ++++ + +L I+ +
Sbjct: 66 LFLLSLFWHAWIGMRNILMDYVHPAGIRLILEILVILSLLSYAIWSV 112
>gi|94499005|ref|ZP_01305543.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanobacter sp. RED65]
gi|94428637|gb|EAT13609.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Oceanobacter sp. RED65]
Length = 115
Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + F + D Y Q S+ AV L IS
Sbjct: 9 SRSGLSDWLIQRVSAVILALYTVFIVGFLLANPDLDYAQWKEFFSSNAVRIFSLLALIST 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
H +GM + DY ++ +F + FV L+ +
Sbjct: 69 VAHAWIGMWTVATDYFKPVSIRFVFQVACFLALFVYLVWGIEII 112
>gi|149911924|ref|ZP_01900523.1| hypothetical succinate dehydrogenase, hydrophobic subunit
[Moritella sp. PE36]
gi|149805017|gb|EDM65045.1| hypothetical succinate dehydrogenase, hydrophobic subunit
[Moritella sp. PE36]
Length = 114
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ GT FI R TAI + +F+ F + D Y+ ++ L I+I
Sbjct: 10 RSGTHDFIMIRATAIIMALYTFYFVGFVA-FNDLTYQVWSDFFASTGNKVFTLLTLIAIV 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ F+ + + +
Sbjct: 69 IHAWIGVWQVLTDYVKSTGLRGALQFILTTTAFIYALVGFV 109
>gi|320539323|ref|ZP_08038992.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Serratia symbiotica str. Tucson]
gi|320030448|gb|EFW12458.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Serratia symbiotica str. Tucson]
Length = 239
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 40/87 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R ++I I ++++ + FFI D YE + L +SI
Sbjct: 134 RNGVHDWLLLRASSIIIILYVLYLLGFFILAPDLTYEIWHGFFATSMTKVFTLLTLLSIL 193
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +G+ ++ DY+ ++++
Sbjct: 194 VHAWIGLWQVLTDYVKPLAVRLVSQLA 220
>gi|294787719|ref|ZP_06752963.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Simonsiella muelleri ATCC 29453]
gi|294484012|gb|EFG31695.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Simonsiella muelleri ATCC 29453]
Length = 115
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMG 71
R + A G + QR TA+ + + + F F + A Y + ++ + V
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVVMVLYTVLFFFFLLGMIGANDYTEWQALFNKTWVKVFTQ 63
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ I++ +H +G++ + DYI L++ +++ ++ F++
Sbjct: 64 VTFIALFLHAWVGIRDLWMDYIKPFYLRLFLQCATVVWLVGCTVYSFFAI 113
>gi|145588944|ref|YP_001155541.1| succinate dehydrogenase, cytochrome b subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047350|gb|ABP33977.1| succinate dehydrogenase subunit D [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 121
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TAI + F I + + G A YE S+ SN + + L IS+
Sbjct: 15 AHYGLKEWIIQRVTAIVMVVFTIVLLVDYCITGSATYEGWSSLFSNQFMKLLTLLAFISL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DYI +++ + +++ + +
Sbjct: 75 FYHAWIGIRDIWMDYIKPVSIRLTLQVLTVLYLVACAAYAV 115
>gi|315497256|ref|YP_004086060.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis excentricus CB 48]
gi|315415268|gb|ADU11909.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Asticcacaulis excentricus CB 48]
Length = 124
Score = 60.1 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 41/107 (38%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S K G G ++ +R+T++A ++ + YE +S + A ++ +
Sbjct: 17 SEKHGAGEWLAERWTSVALFFLTLWAAWSAFGLANQGYEAALSFVKVPLNAGLLAATFVI 76
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
H +G+ + DY + + VL + + ++ K
Sbjct: 77 TMWHTYMGLNANVLDYFPNSRALRLLNLLFCLAVLAVALGGIYLAFK 123
>gi|218694146|ref|YP_002401813.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 55989]
gi|218350878|emb|CAU96576.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 55989]
Length = 115
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVVFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|323976307|gb|EGB71397.1| succinate dehydrogenase [Escherichia coli TW10509]
Length = 115
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATTGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|209363839|ref|YP_001424000.2| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
Dugway 5J108-111]
gi|215919175|ref|NP_820387.2| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
RSA 493]
gi|218512006|sp|P51057|DHSD_COXBU RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|206584059|gb|AAO90901.2| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
RSA 493]
gi|207081772|gb|ABS78118.2| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
Dugway 5J108-111]
Length = 115
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+++ G + QR TA+ + + +F I F + + Y Q ++ S++ + + S
Sbjct: 7 TSRRGYRDWFVQRITALLSGIYAVFVIVFLLVHHPISYPQWHALFSHLIMKIFTLIVIFS 66
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
I H +GM I DY+ + +++ + + LLL+ + ++++
Sbjct: 67 ILWHAWIGMWTIFTDYVKNKPIRLA---LETLVCLLLVGYFVWAI 108
>gi|16128697|ref|NP_415250.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. MG1655]
gi|24112002|ref|NP_706512.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 2a str. 301]
gi|26246690|ref|NP_752730.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli CFT073]
gi|30062115|ref|NP_836286.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 2a str. 2457T]
gi|74311246|ref|YP_309665.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sonnei Ss046]
gi|82543149|ref|YP_407096.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella boydii Sb227]
gi|82775990|ref|YP_402337.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella dysenteriae Sd197]
gi|89107580|ref|AP_001360.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. W3110]
gi|91209756|ref|YP_539742.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UTI89]
gi|110640931|ref|YP_668659.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 536]
gi|110804650|ref|YP_688170.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella flexneri 5 str. 8401]
gi|117622916|ref|YP_851829.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli APEC O1]
gi|157156814|ref|YP_001461882.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli E24377A]
gi|157160202|ref|YP_001457520.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli HS]
gi|170020933|ref|YP_001725887.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli ATCC 8739]
gi|170080389|ref|YP_001729709.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. DH10B]
gi|170684264|ref|YP_001742823.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli SMS-3-5]
gi|188494894|ref|ZP_03002164.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 53638]
gi|191167187|ref|ZP_03029006.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B7A]
gi|191174074|ref|ZP_03035590.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli F11]
gi|193065515|ref|ZP_03046583.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E22]
gi|193070649|ref|ZP_03051586.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E110019]
gi|194429057|ref|ZP_03061588.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B171]
gi|194433999|ref|ZP_03066270.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1012]
gi|194439238|ref|ZP_03071318.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 101-1]
gi|209917973|ref|YP_002292057.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli SE11]
gi|215485741|ref|YP_002328172.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O127:H6 str. E2348/69]
gi|218549713|ref|YP_002383504.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia fergusonii ATCC 35469]
gi|218553249|ref|YP_002386162.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli IAI1]
gi|218557638|ref|YP_002390551.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli S88]
gi|218688516|ref|YP_002396728.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli ED1a]
gi|218699077|ref|YP_002406706.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli IAI39]
gi|218704039|ref|YP_002411558.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UMN026]
gi|227884311|ref|ZP_04002116.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 83972]
gi|237707316|ref|ZP_04537797.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 3_2_53FAA]
gi|238899987|ref|YP_002925783.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli BW2952]
gi|253774307|ref|YP_003037138.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160792|ref|YP_003043900.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli B str. REL606]
gi|256021204|ref|ZP_05435069.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|256023676|ref|ZP_05437541.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 4_1_40B]
gi|260842929|ref|YP_003220707.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O103:H2 str. 12009]
gi|260853957|ref|YP_003227848.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O26:H11 str. 11368]
gi|260866853|ref|YP_003233255.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O111:H- str. 11128]
gi|293403966|ref|ZP_06647960.1| sdhD [Escherichia coli FVEC1412]
gi|293409096|ref|ZP_06652672.1| succinate dehydrogenase [Escherichia coli B354]
gi|293413999|ref|ZP_06656648.1| succinate dehydrogenase [Escherichia coli B185]
gi|293432991|ref|ZP_06661419.1| succinate dehydrogenase [Escherichia coli B088]
gi|297521385|ref|ZP_06939771.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli OP50]
gi|298379742|ref|ZP_06989347.1| sdhD [Escherichia coli FVEC1302]
gi|300816370|ref|ZP_07096592.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 107-1]
gi|300822990|ref|ZP_07103125.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 119-7]
gi|300900717|ref|ZP_07118866.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 198-1]
gi|300906979|ref|ZP_07124648.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 84-1]
gi|300918381|ref|ZP_07134981.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 115-1]
gi|300926125|ref|ZP_07141938.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 182-1]
gi|300929474|ref|ZP_07144942.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 187-1]
gi|300937821|ref|ZP_07152617.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 21-1]
gi|300947199|ref|ZP_07161409.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 116-1]
gi|300957668|ref|ZP_07169858.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 175-1]
gi|300989868|ref|ZP_07178997.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 45-1]
gi|300996467|ref|ZP_07181441.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 200-1]
gi|301020817|ref|ZP_07184881.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 69-1]
gi|301027098|ref|ZP_07190470.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 196-1]
gi|301046046|ref|ZP_07193226.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 185-1]
gi|301305208|ref|ZP_07211306.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 124-1]
gi|301327914|ref|ZP_07221085.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 78-1]
gi|301648025|ref|ZP_07247792.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 146-1]
gi|306812869|ref|ZP_07447062.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli NC101]
gi|307137333|ref|ZP_07496689.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli H736]
gi|307314813|ref|ZP_07594407.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli W]
gi|309786386|ref|ZP_07681012.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1617]
gi|309797435|ref|ZP_07691827.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 145-7]
gi|312965152|ref|ZP_07779389.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 2362-75]
gi|312970799|ref|ZP_07784978.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1827-70]
gi|331641223|ref|ZP_08342358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H736]
gi|331645871|ref|ZP_08346974.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M605]
gi|331651720|ref|ZP_08352739.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M718]
gi|331662075|ref|ZP_08362998.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA143]
gi|331667088|ref|ZP_08367953.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA271]
gi|331676404|ref|ZP_08377101.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H591]
gi|331682153|ref|ZP_08382775.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H299]
gi|332282430|ref|ZP_08394843.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|81175274|sp|P0AC45|DHSD_ECOL6 RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|81175275|sp|P0AC44|DHSD_ECOLI RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|81175276|sp|P0AC46|DHSD_SHIFL RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|28948821|pdb|1NEK|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Ubiquinone Bound
gi|28948825|pdb|1NEN|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Dinitrophenol-17 Inhibitor Co-Crystallized At The
Ubiquinone Binding Site
gi|85544087|pdb|2ACZ|D Chain D, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone
Binding Site
gi|256599503|pdb|2WDQ|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599507|pdb|2WDQ|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599511|pdb|2WDQ|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599515|pdb|2WDV|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599519|pdb|2WDV|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599523|pdb|2WDV|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|259045636|pdb|2WDR|D Chain D, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045640|pdb|2WDR|H Chain H, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045644|pdb|2WDR|L Chain L, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|304445591|pdb|2WP9|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445595|pdb|2WP9|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445599|pdb|2WP9|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhb His207thr Mutant
gi|304445631|pdb|2WU2|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445635|pdb|2WU2|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445639|pdb|2WU2|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|26107089|gb|AAN79273.1|AE016757_177 Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli CFT073]
gi|42924|emb|CAA25486.1| unnamed protein product [Escherichia coli]
gi|146198|gb|AAA23894.1| succinate dehydrogenase [Escherichia coli K-12]
gi|1651318|dbj|BAA35389.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K12 substr. W3110]
gi|1786941|gb|AAC73816.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. MG1655]
gi|24050818|gb|AAN42219.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 2a
str. 301]
gi|30040360|gb|AAP16092.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 2a
str. 2457T]
gi|73854723|gb|AAZ87430.1| succinate dehydrogenase, hydrophobic subunit [Shigella sonnei
Ss046]
gi|81240138|gb|ABB60848.1| succinate dehydrogenase, hydrophobic subunit [Shigella dysenteriae
Sd197]
gi|81244560|gb|ABB65268.1| succinate dehydrogenase, hydrophobic subunit [Shigella boydii
Sb227]
gi|91071330|gb|ABE06211.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli
UTI89]
gi|110342523|gb|ABG68760.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 536]
gi|110614198|gb|ABF02865.1| succinate dehydrogenase, hydrophobic subunit [Shigella flexneri 5
str. 8401]
gi|115512040|gb|ABJ00115.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli APEC O1]
gi|157065882|gb|ABV05137.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli HS]
gi|157078844|gb|ABV18552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E24377A]
gi|169755861|gb|ACA78560.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli ATCC 8739]
gi|169888224|gb|ACB01931.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli str. K-12 substr. DH10B]
gi|170521982|gb|ACB20160.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli SMS-3-5]
gi|188490093|gb|EDU65196.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 53638]
gi|190902735|gb|EDV62465.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B7A]
gi|190905682|gb|EDV65305.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli F11]
gi|192926804|gb|EDV81430.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E22]
gi|192956037|gb|EDV86503.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E110019]
gi|194412888|gb|EDX29179.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli B171]
gi|194417764|gb|EDX33862.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1012]
gi|194421823|gb|EDX37830.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 101-1]
gi|209911232|dbj|BAG76306.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli SE11]
gi|215263813|emb|CAS08150.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O127:H6 str. E2348/69]
gi|218357254|emb|CAQ89889.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia fergusonii ATCC 35469]
gi|218360017|emb|CAQ97564.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli IAI1]
gi|218364407|emb|CAR02087.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli S88]
gi|218369063|emb|CAR16817.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli IAI39]
gi|218426080|emb|CAR06898.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli ED1a]
gi|218431136|emb|CAR12012.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli UMN026]
gi|222032459|emb|CAP75198.1| Succinate dehydrogenase hydrophobic membrane anchor [Escherichia
coli LF82]
gi|226898526|gb|EEH84785.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia sp. 3_2_53FAA]
gi|227838397|gb|EEJ48863.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli 83972]
gi|238863589|gb|ACR65587.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli BW2952]
gi|242376484|emb|CAQ31188.1| succinate dehydrogenase membrane protein, subunit of succinate
dehydrogenase [Escherichia coli BL21(DE3)]
gi|253325351|gb|ACT29953.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972693|gb|ACT38364.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli B str. REL606]
gi|253976887|gb|ACT42557.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli BL21(DE3)]
gi|257752606|dbj|BAI24108.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O26:H11 str. 11368]
gi|257758076|dbj|BAI29573.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O103:H2 str. 12009]
gi|257763209|dbj|BAI34704.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O111:H- str. 11128]
gi|260450124|gb|ACX40546.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli DH1]
gi|281177865|dbj|BAI54195.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli SE15]
gi|281599963|gb|ADA72947.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Shigella flexneri 2002017]
gi|284920500|emb|CBG33562.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli 042]
gi|291323810|gb|EFE63232.1| succinate dehydrogenase [Escherichia coli B088]
gi|291428552|gb|EFF01577.1| sdhD [Escherichia coli FVEC1412]
gi|291434057|gb|EFF07030.1| succinate dehydrogenase [Escherichia coli B185]
gi|291469564|gb|EFF12048.1| succinate dehydrogenase [Escherichia coli B354]
gi|294490933|gb|ADE89689.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli IHE3034]
gi|298279440|gb|EFI20948.1| sdhD [Escherichia coli FVEC1302]
gi|299879432|gb|EFI87643.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 196-1]
gi|300301963|gb|EFJ58348.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 185-1]
gi|300304521|gb|EFJ59041.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 200-1]
gi|300315613|gb|EFJ65397.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 175-1]
gi|300355776|gb|EFJ71646.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 198-1]
gi|300398463|gb|EFJ82001.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 69-1]
gi|300401200|gb|EFJ84738.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 84-1]
gi|300407271|gb|EFJ90809.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 45-1]
gi|300414444|gb|EFJ97754.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 115-1]
gi|300417824|gb|EFK01135.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 182-1]
gi|300453185|gb|EFK16805.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 116-1]
gi|300457186|gb|EFK20679.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 21-1]
gi|300462583|gb|EFK26076.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 187-1]
gi|300524531|gb|EFK45600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 119-7]
gi|300531060|gb|EFK52122.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 107-1]
gi|300839520|gb|EFK67280.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 124-1]
gi|300845557|gb|EFK73317.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 78-1]
gi|301073851|gb|EFK88657.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 146-1]
gi|305853632|gb|EFM54071.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli NC101]
gi|306905711|gb|EFN36239.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli W]
gi|307552574|gb|ADN45349.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli ABU 83972]
gi|307627863|gb|ADN72167.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli UM146]
gi|308118959|gb|EFO56221.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 145-7]
gi|308925780|gb|EFP71261.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 1617]
gi|309700944|emb|CBJ00241.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli ETEC H10407]
gi|310336560|gb|EFQ01727.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1827-70]
gi|312290243|gb|EFR18126.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 2362-75]
gi|312945247|gb|ADR26074.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O83:H1 str. NRG 857C]
gi|313649637|gb|EFS14061.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2a str. 2457T]
gi|315059965|gb|ADT74292.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli W]
gi|315135378|dbj|BAJ42537.1| sdhD [Escherichia coli DH1]
gi|315257639|gb|EFU37607.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 85-1]
gi|315287164|gb|EFU46576.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 110-3]
gi|315292035|gb|EFU51387.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 153-1]
gi|315299239|gb|EFU58493.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 16-3]
gi|315614596|gb|EFU95238.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 3431]
gi|320177265|gb|EFW52271.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella dysenteriae CDC 74-1112]
gi|320179438|gb|EFW54395.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella boydii ATCC 9905]
gi|320182927|gb|EFW57796.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Shigella flexneri CDC 796-83]
gi|320194120|gb|EFW68752.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli WV_060327]
gi|320198159|gb|EFW72763.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli EC4100B]
gi|323153765|gb|EFZ40012.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli EPECa14]
gi|323158772|gb|EFZ44785.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli E128010]
gi|323163880|gb|EFZ49690.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella sonnei 53G]
gi|323170841|gb|EFZ56491.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli LT-68]
gi|323180040|gb|EFZ65596.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1180]
gi|323185119|gb|EFZ70485.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli 1357]
gi|323191067|gb|EFZ76332.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli RN587/1]
gi|323379475|gb|ADX51743.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli KO11]
gi|323938300|gb|EGB34557.1| succinate dehydrogenase [Escherichia coli E1520]
gi|323942944|gb|EGB39108.1| succinate dehydrogenase [Escherichia coli E482]
gi|323947013|gb|EGB43027.1| succinate dehydrogenase [Escherichia coli H120]
gi|323952719|gb|EGB48587.1| succinate dehydrogenase [Escherichia coli H252]
gi|323958466|gb|EGB54172.1| succinate dehydrogenase [Escherichia coli H263]
gi|323963103|gb|EGB58673.1| succinate dehydrogenase [Escherichia coli H489]
gi|323967429|gb|EGB62849.1| succinate dehydrogenase [Escherichia coli M863]
gi|323972007|gb|EGB67227.1| succinate dehydrogenase [Escherichia coli TA007]
gi|324006246|gb|EGB75465.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 57-2]
gi|324010443|gb|EGB79662.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 60-1]
gi|324020371|gb|EGB89590.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli MS 117-3]
gi|324114832|gb|EGC08800.1| succinate dehydrogenase [Escherichia fergusonii B253]
gi|324116263|gb|EGC10184.1| succinate dehydrogenase [Escherichia coli E1167]
gi|325498103|gb|EGC95962.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia fergusonii ECD227]
gi|327254401|gb|EGE66023.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli STEC_7v]
gi|330910471|gb|EGH38981.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli AA86]
gi|331038021|gb|EGI10241.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H736]
gi|331044623|gb|EGI16750.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M605]
gi|331049998|gb|EGI22056.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli M718]
gi|331060497|gb|EGI32461.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA143]
gi|331065444|gb|EGI37337.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA271]
gi|331075897|gb|EGI47194.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H591]
gi|331080577|gb|EGI51753.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli H299]
gi|332093782|gb|EGI98836.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii 5216-82]
gi|332096512|gb|EGJ01508.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella dysenteriae 155-74]
gi|332097688|gb|EGJ02663.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii 3594-74]
gi|332104782|gb|EGJ08128.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella sp. D9]
gi|332342057|gb|AEE55391.1| succinate dehydrogenase, hydrophobic membrane anchor protein SdhD
[Escherichia coli UMNK88]
gi|332760913|gb|EGJ91201.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 4343-70]
gi|332761362|gb|EGJ91648.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2747-71]
gi|332763960|gb|EGJ94198.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-671]
gi|332768181|gb|EGJ98366.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri 2930-71]
gi|333007369|gb|EGK26849.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri VA-6]
gi|333008010|gb|EGK27486.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-218]
gi|333010163|gb|EGK29598.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-272]
gi|333021433|gb|EGK40683.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella flexneri K-304]
Length = 115
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|331672238|ref|ZP_08373029.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA280]
gi|331070433|gb|EGI41797.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA280]
Length = 115
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|212212229|ref|YP_002303165.1| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
CbuG_Q212]
gi|212010639|gb|ACJ18020.1| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
CbuG_Q212]
Length = 115
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+++ G + QR TA+ + + +F I F + + Y Q ++ S++ + + S
Sbjct: 7 TSRRGYRDWFVQRITALLSGIYAVFVIVFLLVHYPISYPQWHALFSHLIMKIFTLIVIFS 66
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
I H +GM I DY+ + +++ + + LLL+ + ++++
Sbjct: 67 ILWHAWIGMWTIFTDYVKNKPIRLA---LETLVCLLLVGYFVWAI 108
>gi|331656739|ref|ZP_08357701.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA206]
gi|331054987|gb|EGI26996.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli TA206]
Length = 111
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +GM ++ DY+ L++M + +++ +I+
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFV 110
>gi|161829711|ref|YP_001597243.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii RSA 331]
gi|495754|gb|AAA74132.1| succinate dehydrogenase [Coxiella burnetii]
gi|161761578|gb|ABX77220.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii RSA 331]
Length = 113
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+++ G + QR TA+ + + +F I F + + Y Q ++ S++ + + S
Sbjct: 5 TSRRGYRDWFVQRITALLSGIYAVFVIVFLLVHHPISYPQWHALFSHLIMKIFTLIVIFS 64
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
I H +GM I DY+ + +++ + + LLL+ + ++++
Sbjct: 65 ILWHAWIGMWTIFTDYVKNKPIRLA---LETLVCLLLVGYFVWAI 106
>gi|94311421|ref|YP_584631.1| succinate dehydrogenase subunit D [Cupriavidus metallidurans CH34]
gi|93355273|gb|ABF09362.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Cupriavidus metallidurans CH34]
Length = 121
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 47/101 (46%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + F + A ++ +G+ YE + +N + + L +S+
Sbjct: 15 AHYGLKDWLAQRVTAVIMVVFTVVLAAVYLAFGNPSYEGWSGLFANQWMKILTFLTILSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ ++++ + +++ +
Sbjct: 75 LFHAWIGVRDIWMDYVKPMAVRLVLQVLTILWLVGCAGYAA 115
>gi|212218999|ref|YP_002305786.1| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
CbuK_Q154]
gi|212013261|gb|ACJ20641.1| succinate dehydrogenase membrane anchor subunit [Coxiella burnetii
CbuK_Q154]
Length = 115
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G + QR TA+ + + +F I F + + Y Q ++ S++ + + SI
Sbjct: 8 SRRGYRDWFVQRITALLSGIYAVFVIVFLLVHHPISYPQWHALFSHLIMKIFTLIVIFSI 67
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +GM I DY+ + +++ + + LLL+ + ++++
Sbjct: 68 LWHAWIGMWTIFTDYVKNKPIRLA---LETLVCLLLVGYFVWAI 108
>gi|237730686|ref|ZP_04561167.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter sp. 30_2]
gi|226906225|gb|EEH92143.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter sp. 30_2]
Length = 115
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ ++++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLILQLAIVVALVVYVIYGFVVV 112
>gi|254994784|ref|ZP_05276974.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str.
Mississippi]
gi|255002909|ref|ZP_05277873.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str. Puerto
Rico]
gi|255004037|ref|ZP_05278838.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str.
Virginia]
Length = 109
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
+ QR + +P F F+ YG +E + + + ++ H LG
Sbjct: 9 WWMQRIAGLVMLPVPFLFAFFYRSYG---FESVHAADYGFCASVSAIALLVAAFYHGVLG 65
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+QV++EDY+H +L+ + F L+ + ++L
Sbjct: 66 VQVVLEDYVHSEVLRAFMITFFRLFALVTVCAVTLAML 103
>gi|71082949|ref|YP_265668.1| membrane portion of succinate dehydrogenase [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062062|gb|AAZ21065.1| possible membrane portion of succinate dehydrogenase [Candidatus
Pelagibacter ubique HTCC1062]
Length = 108
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 46/103 (44%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
T ++ + +++ +P +I+FI + D Y ++V+ + ++ L +
Sbjct: 5 TKKWLFMKISSVILVPLMIWFILNLVSIFDKDYIEVVNFFTTQPSKILVSLTLVFAYFFS 64
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
L + + EDYI +K + + F +++ I + +L +
Sbjct: 65 TLSISEVFEDYIQNEKIKNAANKVLNIFAIIMPIITITVILNL 107
>gi|15800426|ref|NP_286438.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 EDL933]
gi|15830001|ref|NP_308774.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. Sakai]
gi|168750653|ref|ZP_02775675.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4113]
gi|168757175|ref|ZP_02782182.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4401]
gi|168764003|ref|ZP_02789010.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767162|ref|ZP_02792169.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4486]
gi|168779205|ref|ZP_02804212.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4076]
gi|168786875|ref|ZP_02811882.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC869]
gi|168801369|ref|ZP_02826376.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC508]
gi|195939063|ref|ZP_03084445.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. EC4024]
gi|208807233|ref|ZP_03249570.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4206]
gi|208815555|ref|ZP_03256734.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4045]
gi|208823090|ref|ZP_03263408.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4042]
gi|209398560|ref|YP_002269345.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4115]
gi|217325246|ref|ZP_03441330.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. TW14588]
gi|254791868|ref|YP_003076705.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. TW14359]
gi|261224423|ref|ZP_05938704.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. FRIK2000]
gi|261254586|ref|ZP_05947119.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. FRIK966]
gi|291281654|ref|YP_003498472.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli O55:H7 str. CB9615]
gi|81170423|sp|Q8X9A9|DHSD_ECO57 RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|12513637|gb|AAG55046.1|AE005250_5 succinate dehydrogenase, hydrophobic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|13360205|dbj|BAB34170.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|188015182|gb|EDU53304.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002984|gb|EDU71970.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4076]
gi|189355801|gb|EDU74220.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363457|gb|EDU81876.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4486]
gi|189365920|gb|EDU84336.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4501]
gi|189373110|gb|EDU91526.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC869]
gi|189376492|gb|EDU94908.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC508]
gi|208727034|gb|EDZ76635.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732203|gb|EDZ80891.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4045]
gi|208737283|gb|EDZ84967.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4042]
gi|209159960|gb|ACI37393.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC4115]
gi|209776528|gb|ACI86576.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776530|gb|ACI86577.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776532|gb|ACI86578.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776534|gb|ACI86579.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|209776536|gb|ACI86580.1| succinate dehydrogenase hydrophobic subunit [Escherichia coli]
gi|217321467|gb|EEC29891.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591268|gb|ACT70629.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Escherichia coli O157:H7 str. TW14359]
gi|290761527|gb|ADD55488.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Escherichia coli O55:H7 str. CB9615]
gi|320193116|gb|EFW67756.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. EC1212]
gi|320637969|gb|EFX07738.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. G5101]
gi|320643364|gb|EFX12544.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H- str. 493-89]
gi|320648713|gb|EFX17346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H- str. H 2687]
gi|320654297|gb|EFX22350.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659930|gb|EFX27472.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O55:H7 str. USDA 5905]
gi|320664754|gb|EFX31892.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Escherichia coli O157:H7 str. LSU-61]
gi|326341540|gb|EGD65330.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. 1044]
gi|326345758|gb|EGD69497.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Escherichia coli O157:H7 str. 1125]
Length = 115
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFCASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|153207682|ref|ZP_01946329.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii 'MSU Goat Q177']
gi|165918983|ref|ZP_02219069.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii RSA 334]
gi|120576378|gb|EAX33002.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii 'MSU Goat Q177']
gi|165917308|gb|EDR35912.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Coxiella burnetii RSA 334]
Length = 113
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G + QR TA+ + + +F I F + + Y Q ++ S++ + + SI
Sbjct: 6 SRRGYRDWFVQRITALLSGIYAVFVIVFLLVHHPISYPQWHALFSHLIMKIFTLIVIFSI 65
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +GM I DY+ + +++ + + LLL+ + ++++
Sbjct: 66 LWHAWIGMWTIFTDYVKNKPIRLA---LETLVCLLLVGYFVWAI 106
>gi|152969293|ref|YP_001334402.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206580925|ref|YP_002239653.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella pneumoniae 342]
gi|238893760|ref|YP_002918494.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Klebsiella pneumoniae NTUH-K2044]
gi|262041215|ref|ZP_06014427.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288936495|ref|YP_003440554.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella variicola At-22]
gi|290510450|ref|ZP_06549820.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. 1_1_55]
gi|329998779|ref|ZP_08303214.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. MS 92-3]
gi|150954142|gb|ABR76172.1| hypothetical protein KPN_00729 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206569983|gb|ACI11759.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella pneumoniae 342]
gi|238546076|dbj|BAH62427.1| succinate dehydrogenase hydrophobic subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259041444|gb|EEW42503.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288891204|gb|ADC59522.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella variicola At-22]
gi|289777166|gb|EFD85164.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. 1_1_55]
gi|328538565|gb|EGF64670.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Klebsiella sp. MS 92-3]
Length = 115
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E ++ L +SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATTGEISWEVWTGFFASGFTKVFTLLALVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L+++ ++ +++ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLVLQLAIVVALVAYVLYGFVVV 112
>gi|283784478|ref|YP_003364343.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter rodentium ICC168]
gi|282947932|emb|CBG87496.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Citrobacter rodentium ICC168]
Length = 115
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGNLTWEAWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAIRLGLQLAIVVALVVYVIYGFVVV 112
>gi|134094983|ref|YP_001100058.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Herminiimonas arsenicoxydans]
gi|133738886|emb|CAL61933.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Herminiimonas arsenicoxydans]
Length = 121
Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TAI I + + + F+ D YE + + + +++
Sbjct: 15 AHYGLKDWLAQRVTAIIMIVYTVVLLVAFLLASDFSYEGWAGLFAQQWFKMFTFVTFLAL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
H +GM+ I DYI ++++ V L+
Sbjct: 75 FYHAWVGMRNIWMDYIKPVSIRLILQVAT--IVWLVACAG 112
>gi|16759672|ref|NP_455289.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16764103|ref|NP_459718.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|29142555|ref|NP_805897.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56414150|ref|YP_151225.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|161615041|ref|YP_001589006.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167552849|ref|ZP_02346600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167993009|ref|ZP_02574104.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168230611|ref|ZP_02655669.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168238876|ref|ZP_02663934.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168240584|ref|ZP_02665516.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|168264336|ref|ZP_02686309.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|168467711|ref|ZP_02701548.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168820139|ref|ZP_02832139.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|194443367|ref|YP_002039970.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194447545|ref|YP_002044763.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194471846|ref|ZP_03077830.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194733964|ref|YP_002113839.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197247879|ref|YP_002145691.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197265977|ref|ZP_03166051.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197363072|ref|YP_002142709.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|198246230|ref|YP_002214701.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200389482|ref|ZP_03216093.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930109|ref|ZP_03221130.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|207856177|ref|YP_002242828.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|213053348|ref|ZP_03346226.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425382|ref|ZP_03358132.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213581388|ref|ZP_03363214.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213615565|ref|ZP_03371391.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213646452|ref|ZP_03376505.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213851936|ref|ZP_03381468.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|224582548|ref|YP_002636346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|289824380|ref|ZP_06543973.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|25284587|pir||AI0590 succinate dehydrogenase hydrophobic membrane anchor protein
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16419243|gb|AAL19677.1| succinate dehydrogenase, hydrophobic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16501965|emb|CAD05195.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29138186|gb|AAO69757.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56128407|gb|AAV77913.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|161364405|gb|ABX68173.1| hypothetical protein SPAB_02801 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402030|gb|ACF62252.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194405849|gb|ACF66068.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194458210|gb|EDX47049.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194709466|gb|ACF88687.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195629226|gb|EDX48594.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094549|emb|CAR60069.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|197211582|gb|ACH48979.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197244232|gb|EDY26852.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288373|gb|EDY27754.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197940746|gb|ACH78079.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199601927|gb|EDZ00473.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321103|gb|EDZ06304.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205322595|gb|EDZ10434.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328887|gb|EDZ15651.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334665|gb|EDZ21429.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340151|gb|EDZ26915.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|205343043|gb|EDZ29807.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205347147|gb|EDZ33778.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|206707980|emb|CAR32269.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|224467075|gb|ACN44905.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|261245996|emb|CBG23798.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. D23580]
gi|267992471|gb|ACY87356.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157324|emb|CBW16813.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. SL1344]
gi|312911759|dbj|BAJ35733.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|320085001|emb|CBY94790.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|321226308|gb|EFX51359.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322615834|gb|EFY12752.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322621230|gb|EFY18087.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623650|gb|EFY20488.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628922|gb|EFY25702.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634902|gb|EFY31632.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322636570|gb|EFY33274.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641779|gb|EFY38412.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322647811|gb|EFY44291.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322651859|gb|EFY48228.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322652644|gb|EFY48993.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322658452|gb|EFY54715.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322664945|gb|EFY61136.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322668385|gb|EFY64541.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322670527|gb|EFY66660.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322675267|gb|EFY71343.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322679693|gb|EFY75734.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322684831|gb|EFY80830.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|322713776|gb|EFZ05347.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323129043|gb|ADX16473.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|323193149|gb|EFZ78368.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323200600|gb|EFZ85675.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323202272|gb|EFZ87320.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205461|gb|EFZ90427.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323213500|gb|EFZ98293.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323215334|gb|EGA00079.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323220912|gb|EGA05346.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323228079|gb|EGA12215.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231015|gb|EGA15131.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234152|gb|EGA18241.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323238153|gb|EGA22211.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243588|gb|EGA27606.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323247388|gb|EGA31347.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323251376|gb|EGA35248.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323258485|gb|EGA42157.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260639|gb|EGA44248.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323264711|gb|EGA48213.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270975|gb|EGA54410.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|326622457|gb|EGE28802.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
gi|332987670|gb|AEF06653.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 115
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ ++++ + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLILQLVIVVALVVYVIYGFVVV 112
>gi|213023775|ref|ZP_03338222.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 110
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 5 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFTKVFTLLALFSIL 64
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ ++++ + +++ +I+ +
Sbjct: 65 IHAWIGMWQVLTDYVKPLAVRLILQLVIVVALVVYVIYGFVVV 107
>gi|311280403|ref|YP_003942634.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cloacae SCF1]
gi|308749598|gb|ADO49350.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cloacae SCF1]
Length = 115
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATTGTVTWEVWTGFFSSSFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ ++++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLVLQLAIVVALVVYVIYGFVVV 112
>gi|73666823|ref|YP_302839.1| succinate dehydrogenase subunit D [Ehrlichia canis str. Jake]
gi|72393964|gb|AAZ68241.1| succinate dehydrogenase subunit D [Ehrlichia canis str. Jake]
Length = 118
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIA---FFIKYGDAPYEQIVSVLSNVAVA--SIMGLGT 74
H++ QR TA +P ++F+ + + S++ + ++
Sbjct: 4 HSVYHWLIQRATAFVLLPLSMWFLFKFVAVVSLIFKSLPDLHLCFSSIGITDLVVLLCFF 63
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ H LG+QVI+EDYIH +L+ + V+L ++F +F +L
Sbjct: 64 VFAFYHGVLGIQVILEDYIHSSILRTSVFLVIKVIVVLTVLFLVFIVL 111
>gi|170769071|ref|ZP_02903524.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia albertii TW07627]
gi|170122143|gb|EDS91074.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Escherichia albertii TW07627]
Length = 115
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ ++FF G+ Y+ + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVSFFATSGELTYDVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +GM ++ DY+ L+ L + V+ L + ++
Sbjct: 70 IHAWIGMWQVLTDYVKPLALR---LMLQLVIVVALGGYVIY 107
>gi|292490835|ref|YP_003526274.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus halophilus Nc4]
gi|291579430|gb|ADE13887.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus halophilus Nc4]
Length = 109
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 47/104 (45%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QR TA+ + ++ F ++ YE+ + ++ ++ L ++ +
Sbjct: 6 TGLRAWLVQRVTAVFMLVVLLLFFIRLVQDPFESYEEWQRWVGEPLISVLVTLFFGALLL 65
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
H +G++ +I DY+H L++ + + + + LL+
Sbjct: 66 HAWVGLRDVILDYVHSTPLRLFAHSLVVIGYSGIAFWIVRILLR 109
>gi|241663420|ref|YP_002981780.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12D]
gi|240865447|gb|ACS63108.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12D]
Length = 121
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + I +A F+ D Y+ + SN + + L +S+
Sbjct: 15 AHYGLKDFLAQRVTAVIMAVYTIVLLAAFLLSKDTSYQSWAGLFSNQWMKMLTFLAFVSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|146310881|ref|YP_001175955.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Enterobacter sp. 638]
gi|145317757|gb|ABP59904.1| succinate dehydrogenase subunit D [Enterobacter sp. 638]
Length = 115
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ I FF G+ +E + L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMIGFFATSGELTWEIWSGFFGSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAIRLPLQLAIVVALVVYVIYGFVVV 112
>gi|296103349|ref|YP_003613495.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|29418060|gb|AAO39686.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae]
gi|295057808|gb|ADF62546.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 115
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ I FF G +E + L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWEIWSGFFGSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAIRLPLQLAIVVALVVYVIYGFVVV 112
>gi|187733765|ref|YP_001879377.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Shigella boydii CDC 3083-94]
gi|187430757|gb|ACD10031.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shigella boydii CDC 3083-94]
Length = 115
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYAKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|300722383|ref|YP_003711669.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Xenorhabdus nematophila ATCC 19061]
gi|297628886|emb|CBJ89469.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Xenorhabdus nematophila ATCC 19061]
Length = 115
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++++ + F D YE S S+ L ISI
Sbjct: 10 RTGIQDWLLLRASAIIIVLYVLYLVGFVATTSDMTYEVWRSFFSSSLTKVFTVLTLISIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
VH +GM ++ DY+ L+++
Sbjct: 70 VHAWIGMWQVLTDYVKPVALRLVLQL 95
>gi|187926534|ref|YP_001892879.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12J]
gi|187929229|ref|YP_001899716.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12J]
gi|241666045|ref|YP_002984404.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12D]
gi|309783486|ref|ZP_07678187.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia sp. 5_7_47FAA]
gi|187726119|gb|ACD27284.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12J]
gi|187728288|gb|ACD29452.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12J]
gi|240868072|gb|ACS65732.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia pickettii 12D]
gi|308917744|gb|EFP63440.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ralstonia sp. 5_7_47FAA]
Length = 121
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + + +A F+ D Y+ + SN + + L +S+
Sbjct: 15 AHYGLKDFLAQRVTAVIMAVYTVVLLAAFLLSKDTSYQSWAGLFSNQWMKMLTFLAFVSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|205351997|ref|YP_002225798.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205271778|emb|CAR36612.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|326627037|gb|EGE33380.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 115
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFAASGELTFEAWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DYI ++++ + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYIKPLAVRLILQLVIVVALVVYVIYGFVVV 112
>gi|85711266|ref|ZP_01042325.1| Succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
baltica OS145]
gi|85694767|gb|EAQ32706.1| Succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
baltica OS145]
Length = 115
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + +++F + FF D Y + SN+ + L +
Sbjct: 10 RSGPHDFILLRASAVVMLLYVLFMVGFFASTADVTYANWTGLFSNLWMKVFTLLALTGVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ ++ F+ S ++++ + LF
Sbjct: 70 VHGWIGIWQVLTDYVKASGVRAFIQFVFSVGLIIVWLTGLF 110
>gi|261341309|ref|ZP_05969167.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cancerogenus ATCC 35316]
gi|288316613|gb|EFC55551.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enterobacter cancerogenus ATCC 35316]
Length = 115
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ I FF G +E + L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWELWSGFFGSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAIRLPLQLAIVVALVVYVIYGFVVV 112
>gi|56416568|ref|YP_153642.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str. St.
Maries]
gi|222474935|ref|YP_002563350.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str.
Florida]
gi|56387800|gb|AAV86387.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str. St.
Maries]
gi|222419071|gb|ACM49094.1| succinate dehyrdrogenase subunit D [Anaplasma marginale str.
Florida]
Length = 116
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
+ QR + +P F F+ YG +E + + + ++ H LG
Sbjct: 16 WWMQRIAGLVMLPVPFLFAFFYRSYG---FESVHAADYGFCASVSAIALLVAAFYHGVLG 72
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+QV++EDY+H +L+ + F L+ + ++L
Sbjct: 73 VQVVLEDYVHSEVLRAFMITFFRLFALVTVCAVTLAML 110
>gi|114332435|ref|YP_748657.1| succinate dehydrogenase, cytochrome b subunit [Nitrosomonas
eutropha C91]
gi|114309449|gb|ABI60692.1| succinate dehydrogenase subunit D [Nitrosomonas eutropha C91]
Length = 117
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + I + Y YE+ S+ S V L +
Sbjct: 12 AHYGLRDWLVQRVTAVIMAVYTGLLIVLVVVYQPEGYEEFKSLFSIQWVKIASLLCFAGL 71
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
H +G++ ++ DY+H +++ M C V LL F
Sbjct: 72 CWHAWVGVRNVLMDYVHPMFIRLTLQVM--CIVALLGYLIWF 111
>gi|283833992|ref|ZP_06353733.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citrobacter youngae ATCC 29220]
gi|291070126|gb|EFE08235.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Citrobacter youngae ATCC 29220]
Length = 115
Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEVWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ ++++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLILQLAIVVALVVYVIYGFVVV 112
>gi|119897841|ref|YP_933054.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Azoarcus sp. BH72]
gi|119670254|emb|CAL94167.1| probable succinate dehydrogenase, hydrophobic membrane anchor
subunit [Azoarcus sp. BH72]
Length = 114
Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 38/97 (39%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + + F + + Y + SN + L +S+
Sbjct: 8 AHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFASFLFFLSV 67
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
H +G++ I DY+ L++ + ++
Sbjct: 68 FYHAWIGVRDIWMDYVKPDGLRLSLHLITLFLLVGYA 104
>gi|329903474|ref|ZP_08273493.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Oxalobacteraceae bacterium IMCC9480]
gi|327548349|gb|EGF33034.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Oxalobacteraceae bacterium IMCC9480]
Length = 121
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + F K + Y + S + +++
Sbjct: 15 AHYGLKDWLAQRITAAVMAVYTVILLVVFFKAQNFSYAGWAGMFSQQWFKIATFVTFLAL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
H +GM+ I DY+ ++I +++
Sbjct: 75 FYHAWVGMRDIWMDYVKPVSIRISLQVATILWLIACA 111
>gi|187477681|ref|YP_785705.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Bordetella avium 197N]
gi|115422267|emb|CAJ48791.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Bordetella avium 197N]
Length = 127
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS-----VLSNVAVASIMGL 72
A GT FI QR TA+ + + I + YE + V + + L
Sbjct: 16 AHYGTIDFIAQRLTAVIMAVYTLVLIIGLLIMPAYNYENWKALFTFHVFAIPLGQILASL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
+++ H +G++ I DYI L+++ + L+ F+
Sbjct: 76 AFFALAWHAWIGVRDIWMDYIRPVGLRLLLQVLTVL--WLVGSVVYFA 121
>gi|17546714|ref|NP_520116.1| transmembrane succinate dehydrogenase (hydrophobic membrane anchor
subunit) oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17429013|emb|CAD15697.1| putative transmembrane succinate dehydrogenase (hydrophobic
membrane anchor subunit) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 121
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + I +A F+ D Y+ + +N + + L +S+
Sbjct: 15 AHYGLKDFLAQRVTAVIMAVYTIVLLAAFLFSKDTSYQSWAGLFANQWMKLLTFLAFLSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|225023988|ref|ZP_03713180.1| hypothetical protein EIKCOROL_00855 [Eikenella corrodens ATCC
23834]
gi|224943013|gb|EEG24222.1| hypothetical protein EIKCOROL_00855 [Eikenella corrodens ATCC
23834]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + I F + Y + V +
Sbjct: 6 RKLTGAHYGLRDWAMQRATAVLMLIYTVALIVFLLALPG-DYAAWQAFFGQTWVKVFTQI 64
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI L++ ++ +++ +
Sbjct: 65 SFIALFLHAWVGIRDLWMDYIKPFGLRLFLQVATIVWLAGCMVYSV 110
>gi|295096571|emb|CBK85661.1| succinate dehydrogenase subunit D [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ I FF G +E + L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWEIWSGFFGSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIM--FLFMNSCFVLLLIIFCLF 119
+H +GM ++ DY+ +++ + + + V ++ F +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAIRLPLQLIIVVALLVYVIYGFVVV 112
>gi|92113340|ref|YP_573268.1| succinate dehydrogenase subunit D [Chromohalobacter salexigens DSM
3043]
gi|91796430|gb|ABE58569.1| succinate dehydrogenase subunit D [Chromohalobacter salexigens DSM
3043]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 43/100 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +A+ + +F + + + + Y + S + L ISI+
Sbjct: 10 RSGLSDWLIQRISAVILAVYALFMVLYLLFHPGLDYATWSGLFSQTWMRVFSLLAFISIA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ + DY+ ++ F + + + +++ +
Sbjct: 70 AHAWVGLWTVSTDYLKQTGVRFAFQAVVMLAIFVFLVWGV 109
>gi|304445615|pdb|2WS3|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445619|pdb|2WS3|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445623|pdb|2WS3|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ D++ L++M + +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDFVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|238911663|ref|ZP_04655500.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIM--FLFMNSCFVLLLIIFCLF 119
+H +GM ++ DY+ ++++ + + + V ++ F +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLILQLIIVVALVVYVIYGFVVV 112
>gi|114047207|ref|YP_737757.1| succinate dehydrogenase subunit D [Shewanella sp. MR-7]
gi|113888649|gb|ABI42700.1| succinate dehydrogenase subunit D [Shewanella sp. MR-7]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 10 RSGVHDFILLRASAVILACYTIFMVGFIACSSPLTYDVWHGLFSALPMKVFTLLALVALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 IHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIV 112
>gi|299066397|emb|CBJ37582.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Ralstonia solanacearum CMR15]
Length = 121
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + + +A F+ D Y+ + +N + + L +S+
Sbjct: 15 AHYGLKDFLAQRVTAVIMAVYTVVLLAAFLFSKDTSYQSWAGLFANQWMKLLTFLAFLSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|83748082|ref|ZP_00945111.1| Succinate dehydrogenase membrane anchor subunit [Ralstonia
solanacearum UW551]
gi|207723906|ref|YP_002254304.1| transmembrane succinate dehydrogenase (hydrophobic membrane anchor
protein subunit) [Ralstonia solanacearum MolK2]
gi|207742802|ref|YP_002259194.1| transmembrane succinate dehydrogenase (hydrophobic membrane anchor
protein subunit) [Ralstonia solanacearum IPO1609]
gi|300703705|ref|YP_003745307.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
sdhc [Ralstonia solanacearum CFBP2957]
gi|83725268|gb|EAP72417.1| Succinate dehydrogenase membrane anchor subunit [Ralstonia
solanacearum UW551]
gi|206589112|emb|CAQ36074.1| transmembrane succinate dehydrogenase (hydrophobic membrane anchor
protein subunit) [Ralstonia solanacearum MolK2]
gi|206594196|emb|CAQ61123.1| transmembrane succinate dehydrogenase (hydrophobic membrane anchor
protein subunit) [Ralstonia solanacearum IPO1609]
gi|299071368|emb|CBJ42687.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Ralstonia solanacearum CFBP2957]
Length = 121
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + I +A F+ D Y+ + +N + + L +S+
Sbjct: 15 AHYGLKDFLAQRVTAVVMAVYTIVLLAAFLFSKDTSYQSWAGLFANQWMKLLTFLAFLSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|242238587|ref|YP_002986768.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Dickeya dadantii Ech703]
gi|242130644|gb|ACS84946.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Dickeya dadantii Ech703]
Length = 115
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F G YE + L ISI
Sbjct: 10 RNGVHDWLLLRASAIVIVLYVLYIVGFIASAGGITYEIWRGFFAMHLTKVFTLLTLISIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI ++++ +++ +I+ +
Sbjct: 70 VHAWIGMWQVLTDYIKPLAIRLVLQLAIVVVLVVYVIYGTVVV 112
>gi|50120297|ref|YP_049464.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium atrosepticum SCRI1043]
gi|49610823|emb|CAG74268.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pectobacterium atrosepticum SCRI1043]
Length = 115
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 44/103 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++I+ I F GD YE + L SI
Sbjct: 10 RNGVHDWLLIRASAIVIVLYVIYLIGFIATAGDITYEIWRGFFAMALTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI L++ +L+ +I+ +
Sbjct: 70 VHAWIGMWQVLTDYIKPLALRLTLQLAIVIALLVYVIYGTIVV 112
>gi|163802539|ref|ZP_02196431.1| succinate dehydrogenase flavoprotein subunit [Vibrio sp. AND4]
gi|159173622|gb|EDP58441.1| succinate dehydrogenase flavoprotein subunit [Vibrio sp. AND4]
Length = 114
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R +AI + I+ ++FF + D Y S L +S+
Sbjct: 10 RNGVHDFLLIRASAIIMTLYTIYLVSFFA-FSDISYASWTQFFSGSFTKIFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ L + + LF
Sbjct: 69 IHAWIGLWQVLTDYVKCAKLRGALLLGVIAVLFGYVFSGLF 109
>gi|307545705|ref|YP_003898184.1| succinate dehydrogenase, D subunit [Halomonas elongata DSM 2581]
gi|307217729|emb|CBV42999.1| succinate dehydrogenase, D subunit [Halomonas elongata DSM 2581]
Length = 115
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 42/100 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +AI + +F + + + Y + + + L +S+S
Sbjct: 10 RSGLSDWLVQRASAIVLALYTLFIVGYLLFSPGLDYATWSGLFAQTWMRIFSLLAFVSLS 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ + DYI +++ + + + +++ +
Sbjct: 70 AHAWVGLWTVTTDYIKPTGIRVAAQSIIILAIFVFLVWGI 109
>gi|148652074|ref|YP_001279167.1| succinate dehydrogenase, hydrophobic membrane anchor [Psychrobacter
sp. PRwf-1]
gi|148571158|gb|ABQ93217.1| succinate dehydrogenase subunit D [Psychrobacter sp. PRwf-1]
Length = 127
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ ++ QR +A+ + + + FF+ GD Y+Q VS + ++ + + + I
Sbjct: 13 GLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMSLPMRLLSLVAII 72
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMN--SCFVLLLIIFCLF 119
+++ H +GM + DY+ L+++ + V L +F
Sbjct: 73 ALAAHAWVGMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIF 118
>gi|54308238|ref|YP_129258.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum SS9]
gi|46912666|emb|CAG19456.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum SS9]
Length = 115
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI + I+ + FF D +E + ++ L +SI
Sbjct: 10 RNGIHDFILIRATAIILTLYTIYMVGFFAFGPDLSFETWTAFWGQLSTKVFTMLALVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DYI L+ F + + + F +
Sbjct: 70 VHAWIGLWQVLTDYIKCAALRAGIQFGVVVVLFVYLFSGFFIV 112
>gi|288941678|ref|YP_003443918.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Allochromatium vinosum DSM 180]
gi|288897050|gb|ADC62886.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Allochromatium vinosum DSM 180]
Length = 114
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 51/109 (46%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QR TAI + + FI A + ++V+ +++ VA + LG +
Sbjct: 6 SGLMAWLLQRTTAIYLSFLAGYLLLKFIFDAPADHAELVAWVAHPLVAMALMLGVPLVLA 65
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
H +G++ ++ DY+ L++ + ++ ++ + +++ I G
Sbjct: 66 HAWVGIRDVLIDYVRLTNLRVGLMTWFVFIIVASGLWFVKAIITAGIGG 114
>gi|294671246|ref|ZP_06736099.1| hypothetical protein NEIELOOT_02956 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307074|gb|EFE48317.1| hypothetical protein NEIELOOT_02956 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 114
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMG 71
R + A G + QR TA+ I + + F F + A Y Q + V
Sbjct: 4 RKLAGAHYGLRDWAAQRITAVIMIIYAVVFFLFLLGMAGAEDYSQWQAFFGKTWVKVFTQ 63
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMF 102
I++ +H +G++ + DY+ L++
Sbjct: 64 TTLIALLLHAWVGIRDLWMDYVKPFGLRLTL 94
>gi|171463738|ref|YP_001797851.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193276|gb|ACB44237.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 121
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I Q TAI + F + + + G A YE + S+ + + L IS+
Sbjct: 15 AHYGLKEWIIQCVTAIVMVVFTVVLLVDYCITGSATYEGWSGLFSSQVMKLLTLLAFISL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DYI +++ + +++ + +
Sbjct: 75 FYHAWIGVRDIWMDYIKPVSVRLTLQVLTVLYLVACAAYAV 115
>gi|253687627|ref|YP_003016817.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754205|gb|ACT12281.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 115
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++I+ I F GD YE S L SI
Sbjct: 10 RNGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYEIWRGFFSMALTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI L++
Sbjct: 70 VHAWIGMWQVLTDYIKPLALRLTLQLA 96
>gi|256822761|ref|YP_003146724.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Kangiella koreensis DSM 16069]
gi|256796300|gb|ACV26956.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Kangiella koreensis DSM 16069]
Length = 117
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 45/100 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I QR +A+ + ++I+ F + + + ++ + L +S+
Sbjct: 12 RSGLHDWIIQRVSALVMLAYVIYLGYFLCTTPELTFPVWQELFASTFMKVFSLLALLSVI 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ ++ DY+ ++ +F + L L+++ +
Sbjct: 72 GHAWIGLWIVSTDYMPKLAIRFIFQVLVILICLTLLVWGI 111
>gi|28897618|ref|NP_797223.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus RIMD 2210633]
gi|153838595|ref|ZP_01991262.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AQ3810]
gi|260365983|ref|ZP_05778468.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus K5030]
gi|260878227|ref|ZP_05890582.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AN-5034]
gi|260895664|ref|ZP_05904160.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus Peru-466]
gi|260901292|ref|ZP_05909687.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AQ4037]
gi|28805830|dbj|BAC59107.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus RIMD 2210633]
gi|149748013|gb|EDM58872.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AQ3810]
gi|308088170|gb|EFO37865.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus Peru-466]
gi|308090108|gb|EFO39803.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AN-5034]
gi|308109847|gb|EFO47387.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus AQ4037]
gi|308111270|gb|EFO48810.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus K5030]
gi|328473398|gb|EGF44246.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio parahaemolyticus 10329]
Length = 114
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFSDISYASWTQFFGGTFTKVFTMLALASVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +GM + DYI L+ + + LF
Sbjct: 69 IHAWIGMWQVFTDYIKCAKLRGALQLGVIAVLFGYVFSGLF 109
>gi|157146671|ref|YP_001453990.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Citrobacter koseri ATCC BAA-895]
gi|157083876|gb|ABV13554.1| hypothetical protein CKO_02437 [Citrobacter koseri ATCC BAA-895]
Length = 115
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +I++ + FF G+ ++ S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIVYMVGFFAISGELTFDVWSGFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L+++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLVLQLAIVVALVVYVIYGFVVV 112
>gi|293397237|ref|ZP_06641510.1| succinate dehydrogenase [Serratia odorifera DSM 4582]
gi|291420257|gb|EFE93513.1| succinate dehydrogenase [Serratia odorifera DSM 4582]
Length = 115
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + F D YE + L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFVATAPDMTYEIWRGFFATSITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI L++M
Sbjct: 70 VHAWIGMWQVLTDYIKPLALRLMLQLA 96
>gi|153835348|ref|ZP_01988015.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio harveyi HY01]
gi|156973649|ref|YP_001444556.1| hypothetical protein VIBHAR_01352 [Vibrio harveyi ATCC BAA-1116]
gi|269960706|ref|ZP_06175078.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
harveyi 1DA3]
gi|148868139|gb|EDL67298.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio harveyi HY01]
gi|156525243|gb|ABU70329.1| hypothetical protein VIBHAR_01352 [Vibrio harveyi ATCC BAA-1116]
gi|269834783|gb|EEZ88870.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
harveyi 1DA3]
Length = 114
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R +AI + I+ + F + D Y L +SI
Sbjct: 10 RNGVHDFLLIRASAIIMTLYTIYLV-SFCAFSDISYASWTQFFGGTFTKVFTMLALVSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGALQLGVIAVLFGYVFSGLF 109
>gi|149191109|ref|ZP_01869368.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio shilonii AK1]
gi|148835037|gb|EDL52015.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio shilonii AK1]
Length = 115
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ ++F GD Y + L S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLVSFCAFAGDISYVSWTNFFGGTFTKVFTMLALASVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIF 116
+H +G+ ++ DYI L+ + +LL F
Sbjct: 70 IHAWIGLWQVLTDYIKCAKLRGALQL--TFIAVLLGYF 105
>gi|332306146|ref|YP_004433997.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173475|gb|AEE22729.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 115
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 45/101 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TAI F ++ FF+ YE + S++ + +S+
Sbjct: 10 RDGVQDYVTVRATAIIMTVFSLYMAWFFLSTETVTYEIWRGLFSSLGMKVFTFAALVSVM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G ++ DY+ L+ + F + + + LF
Sbjct: 70 LHIRIGFWQVLTDYVKSTGLRAVVQFFINLVAFVYVAVGLF 110
>gi|91762627|ref|ZP_01264592.1| possible membrane portion of succinate dehydrogenase [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718429|gb|EAS85079.1| possible membrane portion of succinate dehydrogenase [Candidatus
Pelagibacter ubique HTCC1002]
Length = 98
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 43/97 (44%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
+ +++ +P +I+FI + D Y ++V+ + ++ L + L +
Sbjct: 1 MKISSVILVPLMIWFILNLVSIFDKDYIEVVNFFTTQPSKILVSLTLVFAYFFSALSISE 60
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ EDYI +K + + F +++ I + +L +
Sbjct: 61 VFEDYIQNEKIKNAANKVLNIFAIIMPIITITVILNL 97
>gi|300691092|ref|YP_003752087.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Ralstonia solanacearum PSI07]
gi|299078152|emb|CBJ50795.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Ralstonia solanacearum PSI07]
Length = 121
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G F+ QR TA+ + + + F+ D Y+ + +N + + + +S+
Sbjct: 15 AHYGLKDFLAQRVTAVVMAVYTVVLLVAFLLSKDTSYQSWAGLFANQWMKLLTFVAFLSL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +G++ I DY+ +++ + +++ +
Sbjct: 75 TYHAWIGVRDIWMDYVKPVAVRLTLQVLTILWLVGCAGYAA 115
>gi|90021754|ref|YP_527581.1| succinate dehydrogenase subunit D [Saccharophagus degradans 2-40]
gi|89951354|gb|ABD81369.1| succinate dehydrogenase subunit D [Saccharophagus degradans 2-40]
Length = 122
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QRF+A+ + IF +A+ + + YE+ + + V L ISI+
Sbjct: 10 RSGLSDWVAQRFSAVVLAAYTIFIVAYLVMHPGLTYEEWSGLFQQLWVRIFTLLVLISIA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
H +G+ ++ DYI R++ LF+ + + +++++ A
Sbjct: 70 AHGWIGLWGVLTDYITTRMIGSSALFLRT------VALSVYAIITFA 110
>gi|297183594|gb|ADI19721.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 109
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
T +I + +++ IP +++FI + + Y IVS S + L I +
Sbjct: 5 TKKWIFLKVSSVILIPLMVWFIINLVSIYEKDYIDIVSFFSTQPSKFLTSLLMIVAFFYS 64
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
L + I EDYIH + +K + + +++ + +
Sbjct: 65 SLSISEIFEDYIHDKKIKKIANKVLYILSIIIPLITI 101
>gi|227114760|ref|ZP_03828416.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
gi|227327542|ref|ZP_03831566.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++I+ I F GD YE + L SI
Sbjct: 10 RNGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYEIWRGFFAMALTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI L++
Sbjct: 70 VHAWIGMWQVLTDYIKPLALRLTLQLA 96
>gi|161504117|ref|YP_001571229.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865464|gb|ABX22087.1| hypothetical protein SARI_02215 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S S+ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEVWTSFFSSAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYI 93
+H +GM ++ DY+
Sbjct: 70 IHAWIGMWQVLTDYV 84
>gi|261822346|ref|YP_003260452.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Pectobacterium wasabiae WPP163]
gi|261606359|gb|ACX88845.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pectobacterium wasabiae WPP163]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++I+ I F GD YE + L SI
Sbjct: 10 RNGVHDWLLIRASAIVIVLYVIYIIGFIATAGDITYEIWRGFFAMALTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI L++
Sbjct: 70 VHAWIGMWQVLTDYIKPLALRLTLQLA 96
>gi|84393481|ref|ZP_00992237.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio splendidus 12B01]
gi|86147664|ref|ZP_01065973.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio sp. MED222]
gi|218710214|ref|YP_002417835.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
splendidus LGP32]
gi|84375909|gb|EAP92800.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio splendidus 12B01]
gi|85834575|gb|EAQ52724.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio sp. MED222]
gi|218323233|emb|CAV19410.1| Succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
splendidus LGP32]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TAI + I+ ++F GD Y L SI
Sbjct: 10 RNGVHDYLLIRATAIIMTLYTIYLVSFCAFSGDISYASWTQFFGGTFTKVFTMLALTSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DYI L++ +L LF
Sbjct: 70 VHAWIGLWQVLTDYIKCAKLRVGLQVGVVAVLLGYFFSGLF 110
>gi|326794792|ref|YP_004312612.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
gi|326545556|gb|ADZ90776.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 45/100 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +AI + +F I + + D YEQ + + + +SI
Sbjct: 10 RSGLYDWMMQRISAIVLALYSVFIIGYLVLNPDLTYEQWSGLFETTWMRIFSLMTLLSIG 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+H +G+ + DYI ++ +F + + + +++ +
Sbjct: 70 IHSWIGLWSVSTDYIKATGVRFLFQAVCGFAMFVYVVWGI 109
>gi|257093960|ref|YP_003167601.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257046484|gb|ACV35672.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TAI + + F+ +E + +N + L IS+
Sbjct: 9 AHYGLKDWIIQRATAIIMAIYTVIFLVVAGAVAPDSFEAWRGIFANGFMKFATFLFFISV 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DYI L+++ + + ++ + +
Sbjct: 69 FYHAWIGVRDIWMDYIKPAGLRLLMMIVTVAVLVGYAGWAV 109
>gi|146307529|ref|YP_001187994.1| succinate dehydrogenase subunit D [Pseudomonas mendocina ymp]
gi|145575730|gb|ABP85262.1| succinate dehydrogenase subunit D [Pseudomonas mendocina ymp]
Length = 122
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + + I Y + + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYTLFLLGYVICNPGMGYAEWHGLFSNTAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
SVH +GM I DY+ L + +F++
Sbjct: 69 SVHAWVGMWTISTDYLTPMALGKWA-TGVRFLFQAVCGIAMFAMF 112
>gi|290474114|ref|YP_003466991.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Xenorhabdus bovienii SS-2004]
gi|289173424|emb|CBJ80201.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
SdhC [Xenorhabdus bovienii SS-2004]
Length = 115
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++++ + F D YE S S+ L +SI
Sbjct: 10 RTGIQDWLLLRASAIVIVLYVLYLVGFVATTSDITYEVWRSFFSSSLTKVFTVLALLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
VH +GM ++ DY+ L+++
Sbjct: 70 VHAWIGMWQVLTDYVKPLALRLVLQL 95
>gi|262281275|ref|ZP_06059057.1| succinate dehydrogenase hydrophobic subunit [Acinetobacter
calcoaceticus RUH2202]
gi|299768984|ref|YP_003731010.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Acinetobacter sp. DR1]
gi|262257506|gb|EEY76242.1| succinate dehydrogenase hydrophobic subunit [Acinetobacter
calcoaceticus RUH2202]
gi|298699072|gb|ADI89637.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Acinetobacter sp. DR1]
Length = 121
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + G Y+Q + + + L +
Sbjct: 6 GLTGSGSRDWFIQRVSAVVLAAYTVVLLGWILCKGGFDYQQWAGFMMTLPMKIFSLLAIL 65
Query: 76 SISVHMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ H +GM + DY+ K + L + + ++ + ++ ++ +
Sbjct: 66 SLIAHAWIGMWQVFTDYVTTRQMGPSAKGLRLVLTTAVIIAVFVYAIWGI 115
>gi|325266126|ref|ZP_08132810.1| succinate dehydrogenase cytochrome b small subunit [Kingella
denitrificans ATCC 33394]
gi|324982356|gb|EGC17984.1| succinate dehydrogenase cytochrome b small subunit [Kingella
denitrificans ATCC 33394]
Length = 132
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP-YEQIVSVLSNVAVASIMG 71
R + A G + QR TA+ + + +FF F + A Y + + V V
Sbjct: 21 RKLAGAHYGVRDWAMQRATAVIMLLYTVFFFFFLLGLIGADDYTEWQAFFGKVWVKVFTQ 80
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +++ +H +G++ + DYI L++ +++ I+ F++
Sbjct: 81 VTFLALFLHAWVGVRDLWMDYIKPFYLRLFLQCATVTWLVGCTIYSFFAI 130
>gi|109898116|ref|YP_661371.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with SdhC [Pseudoalteromonas atlantica T6c]
gi|109700397|gb|ABG40317.1| succinate dehydrogenase subunit D [Pseudoalteromonas atlantica T6c]
Length = 115
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TAI F ++ + FF+ YE + S++ + +S+
Sbjct: 10 RDGVQDYVTVRATAIIMTAFTLYMLWFFLSTPTVTYEIWHELFSSLGMKVFTFAALVSVM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G ++ DY+ L+ + F + + + LF
Sbjct: 70 LHIRIGFWQVLTDYVKSTALRAVVQFFINLVAFVYVAVGLF 110
>gi|269959018|ref|YP_003328807.1| putative succinate dehydrogenase SdhD [Anaplasma centrale str.
Israel]
gi|269848849|gb|ACZ49493.1| putative succinate dehydrogenase SdhD [Anaplasma centrale str.
Israel]
Length = 118
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
+ QR + +P F+ F+ YG +E + + + ++ H LG
Sbjct: 16 WWMQRIAGLVMLPVPFLFVFFYRSYG---FESVYAADYGFCASISGIALLVAAFYHGVLG 72
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+QV++EDY+ + + + F + I + +L
Sbjct: 73 VQVVLEDYVQSEVARAFMVTFFRLFSAVTIGAVVLALF 110
>gi|91228425|ref|ZP_01262350.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio alginolyticus 12G01]
gi|262394886|ref|YP_003286740.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. Ex25]
gi|269966049|ref|ZP_06180140.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
alginolyticus 40B]
gi|91188009|gb|EAS74316.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio alginolyticus 12G01]
gi|262338480|gb|ACY52275.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. Ex25]
gi|269829356|gb|EEZ83599.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
alginolyticus 40B]
Length = 114
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ I F + D Y L +SI
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLI-SFCAFSDISYASWTQFFGGTFTKVFTMLALVSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + + LF
Sbjct: 69 IHAWVGLWQVLTDYIKCAKLRGALQLGVIAVLFGYVFSGLF 109
>gi|163856131|ref|YP_001630429.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella petrii DSM 12804]
gi|163259859|emb|CAP42160.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella petrii]
Length = 127
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS-----VLSNVAVASIMGL 72
A G FI QR TA+ + + I + YE + V + + L
Sbjct: 16 AHYGVVDFIAQRLTAVIMAVYTLVLIIGVLVMPSFSYENWKALFTFHVYALPLGQILATL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
+++ H +G++ I DY+ ++++ + L+ F+
Sbjct: 76 FFFALAWHAWIGVRDIWMDYVRPAGVRMLLQVLTIL--WLVGSIVYFA 121
>gi|271499748|ref|YP_003332773.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Dickeya dadantii Ech586]
gi|270343303|gb|ACZ76068.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Dickeya dadantii Ech586]
Length = 115
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F G+ YE + L +I
Sbjct: 10 RNGVHDWLLLRASAIVIVLYVLYIVGFVASAGNLTYEVWRGFFAMHLTKVFTLLTLFAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI +++
Sbjct: 70 VHAWIGMWQVLTDYIKPLAIRLTLQLA 96
>gi|152996815|ref|YP_001341650.1| succinate dehydrogenase hydrophobic membrane anchor [Marinomonas
sp. MWYL1]
gi|150837739|gb|ABR71715.1| Succinate dehydrogenase hydrophobic membrane anchor [Marinomonas
sp. MWYL1]
Length = 115
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 44/100 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +A+ + IF I + + D Y+Q ++ + + +SI
Sbjct: 10 RSGLYDWMMQRVSAVVLSLYTIFIIGYLLLNPDLTYDQWSALYEATWMRIFSLMVLLSIG 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+H +G+ I DYI + F + + + I++ +
Sbjct: 70 MHSWIGLWSISTDYIKATGARFFFQSLCGLVMFVYIVWGV 109
>gi|169632621|ref|YP_001706357.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
baumannii SDF]
gi|169794943|ref|YP_001712736.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
baumannii AYE]
gi|184159279|ref|YP_001847618.1| succinate dehydrogenase, hydrophobic anchor subunit [Acinetobacter
baumannii ACICU]
gi|213157652|ref|YP_002320450.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii AB0057]
gi|215482490|ref|YP_002324676.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii AB307-0294]
gi|239502288|ref|ZP_04661598.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii AB900]
gi|260549002|ref|ZP_05823224.1| succinate dehydrogenase hydrophobic subunit [Acinetobacter sp.
RUH2624]
gi|260557309|ref|ZP_05829525.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii ATCC 19606]
gi|293610900|ref|ZP_06693199.1| succinate dehydrogenase [Acinetobacter sp. SH024]
gi|301346638|ref|ZP_07227379.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Acinetobacter baumannii AB056]
gi|301512216|ref|ZP_07237453.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Acinetobacter baumannii AB058]
gi|301595937|ref|ZP_07240945.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Acinetobacter baumannii AB059]
gi|169147870|emb|CAM85733.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
baumannii AYE]
gi|169151413|emb|CAP00144.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
baumannii]
gi|183210873|gb|ACC58271.1| Succinate dehydrogenase, hydrophobic anchor subunit [Acinetobacter
baumannii ACICU]
gi|193078178|gb|ABO13125.2| succinate dehydrogenase hydrophobic subunit [Acinetobacter
baumannii ATCC 17978]
gi|213056812|gb|ACJ41714.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii AB0057]
gi|213986477|gb|ACJ56776.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii AB307-0294]
gi|260408170|gb|EEX01641.1| succinate dehydrogenase hydrophobic subunit [Acinetobacter sp.
RUH2624]
gi|260409415|gb|EEX02717.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii ATCC 19606]
gi|292826552|gb|EFF84918.1| succinate dehydrogenase [Acinetobacter sp. SH024]
gi|322509192|gb|ADX04646.1| sdhD [Acinetobacter baumannii 1656-2]
gi|323519220|gb|ADX93601.1| succinate dehydrogenase, hydrophobic anchor subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|325123217|gb|ADY82740.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
calcoaceticus PHEA-2]
Length = 121
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + G Y+Q + + + L +
Sbjct: 6 GLTGSGSRDWFIQRVSAVVLAAYTVVLFGWILCKGGFDYQQWAGFMMTLPMKIFSLLAIL 65
Query: 76 SISVHMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ H +GM + DY+ K + L + + ++ + ++ ++ +
Sbjct: 66 SLIAHAWIGMWQVFTDYVTTRQMGPSAKGLRLVLTTAVIIAVFVYAIWGI 115
>gi|332854232|ref|ZP_08435252.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6013150]
gi|332866325|ref|ZP_08436930.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6013113]
gi|332872540|ref|ZP_08440509.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6014059]
gi|332728157|gb|EGJ59545.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6013150]
gi|332734673|gb|EGJ65777.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6013113]
gi|332739226|gb|EGJ70084.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter baumannii 6014059]
Length = 126
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + G Y+Q + + + L +
Sbjct: 11 GLTGSGSRDWFIQRVSAVVLAAYTVVLFGWILCKGGFDYQQWAGFMMTLPMKIFSLLAIL 70
Query: 76 SISVHMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ H +GM + DY+ K + L + + ++ + ++ ++ +
Sbjct: 71 SLIAHAWIGMWQVFTDYVTTRQMGPSAKGLRLVLTTAVIIAVFVYAIWGI 120
>gi|329120252|ref|ZP_08248920.1| succinate dehydrogenase cytochrome b small subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327462593|gb|EGF08916.1| succinate dehydrogenase cytochrome b small subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 114
Score = 55.1 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFI-IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMG 71
R + A G + QR TA+ I + +FF+ G Y Q + V
Sbjct: 4 RKLAGAHYGLRDWAAQRITAVIMIVYAAVFFLFLIGMAGAQDYSQWQAFFGKTWVKVFTQ 63
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMF 102
++ H +G++ + DYI L++
Sbjct: 64 TTLFALLFHAWVGIRDLWMDYIKPFGLRLTL 94
>gi|304445643|pdb|2WU5|D Chain D, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445647|pdb|2WU5|H Chain H, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445651|pdb|2WU5|L Chain L, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
Length = 115
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ YE + ++ L SI
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +GM ++ DY+ L++M + +++ +I+ +
Sbjct: 70 IMAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV 112
>gi|33593354|ref|NP_880998.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella pertussis Tohama I]
gi|33597754|ref|NP_885397.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella parapertussis 12822]
gi|33602656|ref|NP_890216.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella bronchiseptica RB50]
gi|33572710|emb|CAE42634.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella pertussis Tohama I]
gi|33574183|emb|CAE38514.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella parapertussis]
gi|33577098|emb|CAE35654.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella bronchiseptica RB50]
gi|332382763|gb|AEE67610.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Bordetella pertussis CS]
Length = 127
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVS-----VLSNVAVASIMGL 72
A G FI QR TA+ + + I + YE + V + + L
Sbjct: 16 AHYGVTDFIAQRITAVILAVYTLVLIVGLLIMPAFTYENWKALFTFHVFALPVGQILASL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
+++ H +G++ I DY+ ++++ + L+ F+
Sbjct: 76 AFFALAWHAWIGVRDIWMDYVRPVGVRLLLQVLTIL--WLVGSVVYFA 121
>gi|307130094|ref|YP_003882110.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Dickeya dadantii 3937]
gi|306527623|gb|ADM97553.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Dickeya dadantii 3937]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F G+ YE + L +I
Sbjct: 10 RNGVHDWLLLRASAIVIVLYVLYIVGFVASAGNITYEVWRGFFAMHLTKVFTLLTLFAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI +++
Sbjct: 70 VHAWIGMWQVLTDYIKPLAVRLTLQLA 96
>gi|56460612|ref|YP_155893.1| succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
loihiensis L2TR]
gi|56179622|gb|AAV82344.1| Succinate dehydrogenase, hydrophobic anchor subunit [Idiomarina
loihiensis L2TR]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G+ FI R +AI + + +F FF+ D Y+ + +N+ + L S+
Sbjct: 10 RSGSHDFILLRASAIVMVLYSLFMAGFFLSTPDVTYQVWSGLFANIWMKVFTMLALSSVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ + DY+ L+ + S ++ + + LF
Sbjct: 70 IHGWIGIWQVSTDYVKASGLRAFIQLVFSVGLIAVWLTGLF 110
>gi|167948441|ref|ZP_02535515.1| Succinate dehydrogenase, cytochrome b subunit [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 127
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G ++ QR +A+ + + +FI Y + L++ V S + L +++ VH
Sbjct: 7 GLQAWLFQRISAVYLGLYTPLLLLYFIVMPPQSYAEWHVFLASPWVNSSILLFALALLVH 66
Query: 81 MQLGMQVIIEDYIHYRLLKIMF 102
+G++ ++ DY+H LL++
Sbjct: 67 AWVGVRDVVLDYVHPYLLRLAI 88
>gi|167566430|ref|ZP_02359346.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia oklahomensis EO147]
gi|167573541|ref|ZP_02366415.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia oklahomensis C6786]
Length = 122
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTATVMAIYTVILLVWFFTARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|311694409|gb|ADP97282.1| succinate dehydrogenase, hydrophobic membrane anchor [marine
bacterium HP15]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G +I QR +A + +F + FFI D Y+ ++ V L +SI+
Sbjct: 11 RNGIQDWIIQRVSAYVLALYTLFLLGFFIS-TDVDYQTWSALFDQAWVKIFTLLALLSIA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ + DY+ +++ + V + +++ +
Sbjct: 70 GHAWVGLWTVTTDYMKSAGQRLLAQAVVILGVFVYVVWGI 109
>gi|167583943|ref|ZP_02376331.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ubonensis Bu]
Length = 122
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + I + F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTAAIMAVYTIILLVLFFGAHDFSYEGWASIFAAQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWIGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|90411596|ref|ZP_01219606.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum 3TCK]
gi|90327486|gb|EAS43839.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium profundum 3TCK]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI + I+ + F D +E + ++ L +SI
Sbjct: 10 RNGIHDFILIRATAIILTLYTIYMVGFIAFGPDLSFETWTAFWGQLSTKVFTMLALLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DYI L+ F + + + F +
Sbjct: 70 VHAWIGLWQVLTDYIKCAALRAGIQFGVVAVLFVYLFSGFFIV 112
>gi|322833846|ref|YP_004213873.1| succinate dehydrogenase [Rahnella sp. Y9602]
gi|321169047|gb|ADW74746.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rahnella sp. Y9602]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI +I++ + F + + ++ S+ L +SI
Sbjct: 10 RNGVHDWLLLRASAIILTLYILYILGFVVLAQELTFDVWHGFFSSSITKVFTLLALLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++M +++ +++ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLAVRLMLQLAIVVVLVVYLLYGTIVV 112
>gi|302878558|ref|YP_003847122.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gallionella capsiferriformans ES-2]
gi|302581347|gb|ADL55358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Gallionella capsiferriformans ES-2]
Length = 115
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + A+ + D Y++ + S+ V + L IS+
Sbjct: 9 AHYGLRDWLFQRVTAVVMAISSVTLAAYLLWQSDMDYDRWTGLFSSQPVRAFALLFLISL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +G++ I+ DY+ +++ + VL LI++ ++S+
Sbjct: 69 FFHAWVGIRDIVMDYVKPAAVRLAIHIL---VVLALIMYSIWSV 109
>gi|30249046|ref|NP_841116.1| succinate dehydrogenase, cytochrome b subunit [Nitrosomonas
europaea ATCC 19718]
gi|30138663|emb|CAD84958.1| Succinate dehydrogenase, cytochrome b subunit [Nitrosomonas
europaea ATCC 19718]
Length = 117
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + I Y +E+ ++ S + L +
Sbjct: 12 AHYGLKDWLVQRITAVLMAAYTGLLIILITVYQPESHEEFKALFSIQWMKIASLLFFAGL 71
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
H +G++ ++ DY+H +++ +C V LL F
Sbjct: 72 CWHAWVGVRNVLMDYVHPMPVRLTLQI--TCIVALLGYLIWF 111
>gi|37525381|ref|NP_928725.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|36784808|emb|CAE13720.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 115
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +A+ + ++++ + F + D YE ++ L SI
Sbjct: 10 RTGIHDWLLLRASAMIIVLYVLYMLGFIVTTPDITYEVWRGFFASSITKVFTVLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
H +GM ++ DY+ L++M
Sbjct: 70 AHAWIGMWQVLTDYVKPLALRLMLQLA 96
>gi|296390044|ref|ZP_06879519.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas aeruginosa PAb1]
Length = 122
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLITHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + +F+
Sbjct: 69 SVHAWVGMWTISTDYLTSMALGKAA-TVVRFLFQAVCGMAMFA 110
>gi|251790497|ref|YP_003005218.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Dickeya zeae Ech1591]
gi|247539118|gb|ACT07739.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Dickeya zeae Ech1591]
Length = 115
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 36/87 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F G YE + L +I
Sbjct: 10 RNGVHDWLLIRASAIVIVLYVLYIVGFVASAGHITYEVWRGFFAMHLTKVFTLLTLFAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DYI +++
Sbjct: 70 VHAWIGMWQVLTDYIKPLAIRLTLQLA 96
>gi|330811090|ref|YP_004355552.1| succinate dehydrogenase (succinate dehydrogenase hydrophobic
membrane anchor subunit) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379198|gb|AEA70548.1| Succinate dehydrogenase (Succinate dehydrogenase hydrophobic
membrane anchor subunit) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 122
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + Y Q + +N + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYVVANPGLGYAQWHELFANNWMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMAFGKSA-TAVRFLFQAVCGVAMFA 110
>gi|15596779|ref|NP_250273.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa PAO1]
gi|116049527|ref|YP_791669.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218892461|ref|YP_002441328.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa LESB58]
gi|254234683|ref|ZP_04928006.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa C3719]
gi|254239931|ref|ZP_04933253.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 2192]
gi|9947545|gb|AAG04971.1|AE004586_9 succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa PAO1]
gi|115584748|gb|ABJ10763.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166614|gb|EAZ52125.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa C3719]
gi|126193309|gb|EAZ57372.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 2192]
gi|218772687|emb|CAW28472.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa LESB58]
Length = 122
Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + +F+
Sbjct: 69 SVHAWVGMWTISTDYLTSMALGKAA-TVVRFLFQAVCGMAMFA 110
>gi|167840399|ref|ZP_02467083.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia thailandensis MSMB43]
Length = 122
Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTAAVMAIYTVILLVWFFTARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|313106595|ref|ZP_07792822.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 39016]
gi|310879324|gb|EFQ37918.1| succinate dehydrogenase (D subunit) [Pseudomonas aeruginosa 39016]
Length = 124
Score = 53.9 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 11 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 70
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + +F+
Sbjct: 71 SVHAWVGMWTISTDYLTSMALGKAA-TVVRFLFQAVCGMAMFA 112
>gi|295700756|ref|YP_003608649.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1002]
gi|295439969|gb|ADG19138.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1002]
Length = 122
Score = 53.9 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 43/101 (42%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + +A+F D Y+ S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTAVVMAVYTVILLAWFFLARDFSYDGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ +++ + ++L +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGTRLVLQALTILWLLACAGYAA 116
>gi|238024242|ref|YP_002908474.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae
BGR1]
gi|237878907|gb|ACR31239.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae
BGR1]
Length = 122
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + +A+F D Y+ S+ S + + +++
Sbjct: 16 AHYGLRDWLAQRITAVIMAVYTVILLAWFFSARDFSYDGWASIFSTQWMKLATFVTLLAL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGVRLVLQSLT--IVWLLACAGYAA 116
>gi|49077572|gb|AAT49694.1| PA1582 [synthetic construct]
Length = 123
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + + +F+
Sbjct: 69 SVHAWVGMWTISTDYLTSMALGKAA-TVVRFLLQAVCGMAMFA 110
>gi|300715875|ref|YP_003740678.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia billingiae Eb661]
gi|299061711|emb|CAX58827.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia billingiae Eb661]
Length = 115
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R A+ ++I+ + F + G Y+ ++ L SI
Sbjct: 10 RNGVHDWLLLRAAAMIMTLYVIYILGFVVMSGTLTYDIWRGFFASNFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI +++M + + + I+ +
Sbjct: 70 VHGWIGMWQVLTDYIKPVAIRLMLQLVVVVALFVYAIYGTVVV 112
>gi|209520501|ref|ZP_03269259.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. H160]
gi|209499039|gb|EDZ99136.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. H160]
Length = 122
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D Y+ S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITAAVMAIYTVILLVWFFGAQDFSYDGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ +++ V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGVRLFLQAAT--IVWLLACAGYAA 116
>gi|270263769|ref|ZP_06192038.1| hypothetical protein SOD_e03990 [Serratia odorifera 4Rx13]
gi|270042653|gb|EFA15748.1| hypothetical protein SOD_e03990 [Serratia odorifera 4Rx13]
Length = 115
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + FF+ D YE + L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFFVTAPDLTYEIWRGFFATSITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DY+ ++++ +L+ +++ +
Sbjct: 70 VHAWVGLWQVLTDYVKPLAVRLVLQLAIVVVLLVYLLYGTIVV 112
>gi|261210019|ref|ZP_05924318.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. RC341]
gi|260840965|gb|EEX67502.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. RC341]
Length = 114
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R +AI + + I+ I F + D Y + L +S+
Sbjct: 10 RNGVHDFLLIRASAIIMVLYTIY-IVSFCAFTDISYVAWTQFFGSTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + + LF
Sbjct: 69 IHGWIGLWQVLTDYIKCSKLRAGLQLVVIAVLFGYFFSGLF 109
>gi|126668308|ref|ZP_01739267.1| Succinate dehydrogenase, hydrophobic anchor subunit [Marinobacter
sp. ELB17]
gi|126627225|gb|EAZ97863.1| Succinate dehydrogenase, hydrophobic anchor subunit [Marinobacter
sp. ELB17]
Length = 117
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +A + + F I Y+ + + + + +SI
Sbjct: 12 RSGVADWLMQRVSAYVLALYTVVLFVFIIANPGMSYDTWAGLFGQTWMRIVTLMALLSIG 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
H +G+ + DY+ L + + + FV ++ +
Sbjct: 72 AHAWVGLWTVTTDYMKSALPRFLVQAACGLTMFVYVVWGIQIL 114
>gi|83716544|ref|YP_438860.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia thailandensis E264]
gi|257141947|ref|ZP_05590209.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia thailandensis E264]
gi|83650369|gb|ABC34433.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia thailandensis E264]
Length = 122
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTASVMAIYTVILLVWFFTARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|15676842|ref|NP_273987.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis MC58]
gi|161869862|ref|YP_001599031.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis 053442]
gi|7226188|gb|AAF41355.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis MC58]
gi|161595415|gb|ABX73075.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis 053442]
gi|308389612|gb|ADO31932.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria meningitidis alpha710]
gi|325136115|gb|EGC58724.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M0579]
gi|325207984|gb|ADZ03436.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis NZ-05/33]
Length = 113
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G ++ QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|152984268|ref|YP_001349046.1| succinate dehydrogenase subunit D [Pseudomonas aeruginosa PA7]
gi|150959426|gb|ABR81451.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas aeruginosa PA7]
Length = 124
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ ++IF + + I + + Y + S + L +++
Sbjct: 11 SRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVAL 70
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + +F+
Sbjct: 71 SVHAWVGMWTISTDYLTPMALGKAA-TVVRFLFQAVCGMAMFA 112
>gi|70729105|ref|YP_258841.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens Pf-5]
gi|68343404|gb|AAY91010.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens Pf-5]
Length = 122
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + Y Q + +N + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLVANPGIDYTQWHGLFANNWMRIFSLLAMVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTISTDYLTPMALGKSA-TAVRFLFQAVCGVAMFA 110
>gi|332283674|ref|YP_004415585.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Pusillimonas sp. T7-7]
gi|330427627|gb|AEC18961.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Pusillimonas sp. T7-7]
Length = 126
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV-----LSNVAVASIMGL 72
A GT FI QR TAI + + + + + YE + LS + L
Sbjct: 15 AHYGTLDFIAQRVTAIIMAVYTLVLLGGILFTPELNYEGWRGLFTFTCLSLPVGQMLATL 74
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
+S+ H +G++ I DY+ L++ + L+ F+
Sbjct: 75 AFMSLVWHAWIGVRDIWMDYVRSAGLRLFLQVLTIL--WLVGALVYFA 120
>gi|186473181|ref|YP_001860523.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phymatum STM815]
gi|184195513|gb|ACC73477.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phymatum STM815]
Length = 122
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + + +F Y+ + + + + +S+
Sbjct: 16 AHYGLRDWLAQRITAVIMAVYTVILLGWFFGAQAFSYDGWAGIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI +++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGTRLVLQALT--IVWLLACAGYAA 116
>gi|186470390|ref|YP_001861708.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phymatum STM815]
gi|184196699|gb|ACC74662.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phymatum STM815]
Length = 122
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + + +F Y+ + + + + +S+
Sbjct: 16 AHYGLRDWLAQRITAVIMAVYTLILLGWFFGAQAFSYDGWAGIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI +++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGTRLVLQALT--IVWLLACAGYAA 116
>gi|157369507|ref|YP_001477496.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Serratia proteamaculans 568]
gi|157321271|gb|ABV40368.1| Succinate dehydrogenase hydrophobic membrane anchor [Serratia
proteamaculans 568]
Length = 115
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + FF+ D YE + L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFFVTAPDLTYEIWRGFFATSITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +G+ ++ DY+ ++++ +L+ +++ +
Sbjct: 70 AHAWIGLWQVLTDYVKPVAVRLVLQLAIVVVLLVYLLYGTIVV 112
>gi|291616725|ref|YP_003519467.1| SdhD [Pantoea ananatis LMG 20103]
gi|291151755|gb|ADD76339.1| SdhD [Pantoea ananatis LMG 20103]
gi|327393150|dbj|BAK10572.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Pantoea ananatis AJ13355]
Length = 115
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TAI +II+ + F + Y+ ++ L SI
Sbjct: 10 RNGIQDWLLLRATAILITLYIIYLLGFVVMTDTLTYDIWRGFFASAFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ + +L I+ +
Sbjct: 70 IHGWIGMWQVLTDYVKPLATRLLLQLVIVVALLSYAIYGFVVV 112
>gi|145299316|ref|YP_001142157.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142852088|gb|ABO90409.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 114
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R TA+ ++++ + F + D YE + L + +
Sbjct: 10 RSGVHDYILIRATALIMTAYVLYLVGFVA-FNDISYEVWTGFFAKTFTKVFTLLTLLCVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ F FV L+ F +
Sbjct: 69 IHAWIGLWQVLTDYIKPVGLRGALQFALVVVLFVYLMTGFVVL 111
>gi|91777243|ref|YP_552451.1| succinate dehydrogenase subunit D [Burkholderia xenovorans LB400]
gi|91689903|gb|ABE33101.1| succinate dehydrogenase subunit D [Burkholderia xenovorans LB400]
Length = 122
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITACVMAIYTVILLVWFFGARDFSYEGWSSIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGTRLFLQALT--IVWLLACAGYAA 116
>gi|134293106|ref|YP_001116842.1| succinate dehydrogenase subunit D [Burkholderia vietnamiensis G4]
gi|161521190|ref|YP_001584617.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|161522865|ref|YP_001585794.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|189348300|ref|YP_001941496.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|189352634|ref|YP_001948261.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|221196967|ref|ZP_03570014.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD2M]
gi|221203640|ref|ZP_03576658.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD2]
gi|221212431|ref|ZP_03585408.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD1]
gi|254253641|ref|ZP_04946958.1| Succinate dehydrogenase cytochrome b subunit [Burkholderia dolosa
AUO158]
gi|124898286|gb|EAY70129.1| Succinate dehydrogenase cytochrome b subunit [Burkholderia dolosa
AUO158]
gi|134136263|gb|ABO57377.1| succinate dehydrogenase subunit D [Burkholderia vietnamiensis G4]
gi|160345240|gb|ABX18325.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|160346418|gb|ABX19502.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|189336656|dbj|BAG45725.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|189338438|dbj|BAG47506.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Burkholderia multivorans ATCC 17616]
gi|221167530|gb|EED99999.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD1]
gi|221175806|gb|EEE08235.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD2]
gi|221183521|gb|EEE15921.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia multivorans CGD2M]
gi|325525108|gb|EGD02999.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. TJI49]
Length = 122
Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + F D YE S+ S + + +S+
Sbjct: 16 AHYGLRDWLAQRVTATIMAVYTVILLVLFFGAHDFSYEGWASIFSAQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|330829372|ref|YP_004392324.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Aeromonas veronii B565]
gi|328804508|gb|AEB49707.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Aeromonas veronii B565]
Length = 114
Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R TA+ ++++ + F + D YE + L + +
Sbjct: 10 RSGVHDYILIRATALIMTCYVLYLVGFVA-FNDITYEVWAGFFAKTFTKVFTLLTLLCVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ F FV L+ F +
Sbjct: 69 IHAWIGLWQVLTDYIKPVGLRGALQFALVVVLFVYLMTGFVVL 111
>gi|270157996|ref|ZP_06186653.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|289163738|ref|YP_003453876.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
gi|269990021|gb|EEZ96275.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|288856911|emb|CBJ10725.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
Length = 115
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ + IF I F + + + Q ++ SN+ V + ++S
Sbjct: 10 GNGLKDWLIQRVTAVYFAVYTIFIIGFLLSHPGLSFAQWHALFSNIVVQIASIIALFALS 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
+H +G+ + DY+ +L++ +
Sbjct: 70 LHAWIGLWTVTTDYMKCTVLRVSVQMIVVL 99
>gi|123443161|ref|YP_001007135.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|238757976|ref|ZP_04619157.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia aldovae ATCC 35236]
gi|122090122|emb|CAL12985.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|238703730|gb|EEP96266.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia aldovae ATCC 35236]
gi|318604820|emb|CBY26318.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia enterocolitica subsp. palearctica Y11]
Length = 115
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI +I++ + F + D YE ++ L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYILYILGFVVIVPDITYEIWRGFFASHITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G+ ++ DYI ++++
Sbjct: 70 AHAWIGLWQVLTDYIKPLAVRLVLQLAV 97
>gi|261252261|ref|ZP_05944834.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
orientalis CIP 102891]
gi|260935652|gb|EEX91641.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
orientalis CIP 102891]
Length = 114
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L +S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFTDISYVSWTQFFGGTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGGLQLAVIAVLFGYFFSGLF 109
>gi|304415183|ref|ZP_07395898.1| succinate dehydrogenase membrane subunit 2 that binds cytochrome
b556 [Candidatus Regiella insecticola LSR1]
gi|304282965|gb|EFL91413.1| succinate dehydrogenase membrane subunit 2 that binds cytochrome
b556 [Candidatus Regiella insecticola LSR1]
Length = 115
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 40/88 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + F D YE + + + L +SI
Sbjct: 10 RNGVHDWLLLRASAIVIFLYVLYIVGFIAIAPDITYEIWHNFFALIFTKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
VH +G+ ++ DY+ L+++ M
Sbjct: 70 VHAWIGLWQVLTDYVKPLALRLVLQLMV 97
>gi|240115519|ref|ZP_04729581.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID18]
gi|268601194|ref|ZP_06135361.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID18]
gi|268585325|gb|EEZ50001.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID18]
Length = 113
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G ++ QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALP-KEYPAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|77165930|ref|YP_344455.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus oceani ATCC 19707]
gi|76884244|gb|ABA58925.1| succinate dehydrogenase subunit D [Nitrosococcus oceani ATCC 19707]
Length = 105
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 49/104 (47%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QR TA+ + ++FF+A ++ YE +S+ V+ ++ L + +
Sbjct: 2 TGLRAWLVQRGTAVIMLVLLLFFLARLMQGSFKTYEAWREWISDPLVSIMVALFFGVLLL 61
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
H +G++ II DY+ L++ + + + + LL+
Sbjct: 62 HSWVGLRDIILDYVRPVSLRLFAHSLIVVVYSGIGFWVIRILLR 105
>gi|307726506|ref|YP_003909719.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1003]
gi|307726615|ref|YP_003909828.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1003]
gi|307587031|gb|ADN60428.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1003]
gi|307587140|gb|ADN60537.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1003]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A+F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRLTACVMAIYTVILLAWFFGARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ +++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGTRLLLQALT--IVWLLACAGYAA 116
>gi|117618674|ref|YP_856455.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117560081|gb|ABK37029.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 114
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R TA+ ++++ + F + D YE + L + +
Sbjct: 10 RSGVHDYILIRATALIMTCYVLYLVGFVA-FNDISYEVWTGFFAKTFTKVFTLLALLCVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ F FV L+ F +
Sbjct: 69 IHAWIGLWQVLTDYIKPVGLRGALQFALVVVLFVYLMTGFVVL 111
>gi|120598553|ref|YP_963127.1| putative succinate dehydrogenase, hydrophobic subunit [Shewanella
sp. W3-18-1]
gi|146293368|ref|YP_001183792.1| putative succinate dehydrogenase, hydrophobic subunit [Shewanella
putrefaciens CN-32]
gi|120558646|gb|ABM24573.1| succinate dehydrogenase subunit D [Shewanella sp. W3-18-1]
gi|145565058|gb|ABP75993.1| succinate dehydrogenase subunit D [Shewanella putrefaciens CN-32]
gi|319426670|gb|ADV54744.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella putrefaciens 200]
Length = 115
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 10 RSGVHDFILLRASAVILACYTIFLVGFIACSSPLTYDVWHGLFSALPMKVFTLLALVALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 VHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIV 112
>gi|89073517|ref|ZP_01160040.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium sp. SKA34]
gi|89050781|gb|EAR56262.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Photobacterium sp. SKA34]
Length = 115
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI + ++ + FF + +E + S ++ L +SI
Sbjct: 10 RNGIHDFILIRATAIILTLYTVYMVGFFAFGPELTFETWSAFFSQISTKVFTMLALVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DYI +L++ F+ + + + F +
Sbjct: 70 VHAWIGLWQVLTDYIKPAVLRVGLQFVVVAVLFVYLFAGFFIV 112
>gi|260776542|ref|ZP_05885437.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607765|gb|EEX34030.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 114
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L +S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFSDISYVSWTQFFGGTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGFLQLGIIAVLFGYFFSGLF 109
>gi|120554078|ref|YP_958429.1| succinate dehydrogenase, hydrophobic anchor subunit [Marinobacter
aquaeolei VT8]
gi|120323927|gb|ABM18242.1| succinate dehydrogenase subunit D [Marinobacter aquaeolei VT8]
Length = 113
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G +I QR TA + +F + FF+ D Y+ ++ + L +SI+
Sbjct: 9 RNGIQDWIIQRVTAYVLALYTLFLLGFFVT-TDVDYQAWSALFAQGWFKIFSLLALLSIA 67
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ + DYI + + + + + +++ +
Sbjct: 68 GHAWVGLWTVSTDYIKSAMPRFLLQAACVLVMFVYVVWGI 107
>gi|332970370|gb|EGK09362.1| succinate dehydrogenase cytochrome b small subunit [Kingella kingae
ATCC 23330]
Length = 115
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMG 71
R + A G + QR TA+ + + +FF F I A Y + S V
Sbjct: 4 RKLAGAGYGLRDWAMQRATAVLMLLYTVFFFFFLIGLLGAKDYTEWQSFFGTTWVKVFTQ 63
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+++ +H +G++ + DYI +++ +++ ++ + +
Sbjct: 64 TTFLALFLHAWVGIRDLWMDYIKPFGIRLFLQCATIIWLVACTVYSFYVI 113
>gi|170702917|ref|ZP_02893758.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria IOP40-10]
gi|170132176|gb|EDT00663.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria IOP40-10]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A F D YE S+ S + + +S+
Sbjct: 16 AHYGLRDWLAQRVTAAIMAVYTVILLALFFGAHDFSYEGWASIFSAQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|187921486|ref|YP_001890518.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phytofirmans PsJN]
gi|187719924|gb|ACD21147.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia phytofirmans PsJN]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A+F D Y+ S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITAAVMAIYTVILLAWFFGARDFSYDGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGIRLLLQALT--IVWLLACAGYAA 116
>gi|312796840|ref|YP_004029762.1| succinate dehydrogenase membrane anchor subunit [Burkholderia
rhizoxinica HKI 454]
gi|312168615|emb|CBW75618.1| Succinate dehydrogenase membrane anchor subunit (EC 1.3.99.1)
[Burkholderia rhizoxinica HKI 454]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 40/89 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + + + +F G+ Y+ ++ S + + +++
Sbjct: 16 AHYGLRDWIAQRATAMIMAIYTVILLVWFFLAGNFSYDGWAAIFSIQWMKLATFVTLLAL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G++ I DY+ ++++ +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLVLQVLT 104
>gi|115358063|ref|YP_775201.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia
ambifaria AMMD]
gi|171316068|ref|ZP_02905294.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria MEX-5]
gi|172062860|ref|YP_001810511.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria MC40-6]
gi|115283351|gb|ABI88867.1| succinate dehydrogenase subunit D [Burkholderia ambifaria AMMD]
gi|171098770|gb|EDT43563.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria MEX-5]
gi|171995377|gb|ACB66295.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia ambifaria MC40-6]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A F D YE S+ S + + +S+
Sbjct: 16 AHYGLRDWLAQRVTATIMAVYTVILLALFFGAHDFSYEGWASIFSAQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|323495091|ref|ZP_08100178.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio brasiliensis LMG 20546]
gi|323310642|gb|EGA63819.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio brasiliensis LMG 20546]
Length = 114
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L +S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFTDISYVSWTQFFGGTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGGLQLGVIAVLFGYFFSGLF 109
>gi|114775455|ref|ZP_01451023.1| hypothetical protein SPV1_03983 [Mariprofundus ferrooxydans PV-1]
gi|114553566|gb|EAU55947.1| hypothetical protein SPV1_03983 [Mariprofundus ferrooxydans PV-1]
Length = 120
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIF-FIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLG 73
GSA+ G + QR +A+ + F+ + Y ++ ++ + + +
Sbjct: 8 GSARSGFRDWYLQRLSAVVLAVLLPLPFVVLILVYAGVVDQFGLLDIVDHFVSRLLHTIL 67
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFL 103
++ +H +G++V+IEDY+ ++ +
Sbjct: 68 IFALIIHAYMGLKVMIEDYVPAIGWRVSLI 97
>gi|323498612|ref|ZP_08103604.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio sinaloensis DSM 21326]
gi|323316310|gb|EGA69329.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio sinaloensis DSM 21326]
Length = 114
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L +S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFTDISYVSWTQFFGGTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGGLQLGVIAVLFAYFFSGLF 109
>gi|107026776|ref|YP_624287.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia
cenocepacia AU 1054]
gi|116692032|ref|YP_837565.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia
cenocepacia HI2424]
gi|170735975|ref|YP_001777235.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia cenocepacia MC0-3]
gi|206562823|ref|YP_002233586.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Burkholderia cenocepacia J2315]
gi|105896150|gb|ABF79314.1| succinate dehydrogenase subunit D [Burkholderia cenocepacia AU
1054]
gi|116650032|gb|ABK10672.1| succinate dehydrogenase subunit D [Burkholderia cenocepacia HI2424]
gi|169818163|gb|ACA92745.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia cenocepacia MC0-3]
gi|198038863|emb|CAR54825.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Burkholderia cenocepacia J2315]
Length = 122
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTATIMAVYTVILLVLFFGAHDFSYEGWASIFAAQWMKLATFVMLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|160872782|ref|ZP_02062914.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsiella grylli]
gi|159121581|gb|EDP46919.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rickettsiella grylli]
Length = 127
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
+ +G ++ QR T++ +I+F +A+ + + + S++++ L S+
Sbjct: 12 SGNGLRDWLIQRVTSLVLAAYILFLLAYIGYHHPLDFTTWQHLFSHLSMRLFSTLFLFSL 71
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIM--FLFMNSCFVLLLIIFCLF 119
H +G+ I+ DYI + L++M + + F+ L+ +F
Sbjct: 72 FWHAWVGLWTIVTDYIRWASLRLMVQLFIIMTLFLYLIWGLAIF 115
>gi|71892106|ref|YP_277838.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796212|gb|AAZ40963.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 115
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ R +A+ + +I++ F I + Y++ S + +S
Sbjct: 11 HGVYEWLLVRISAVWMLLYIVYISIFIISANNLSYDKWYDFFSKNTTKIFSIMVLLSALN 70
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +GM+ I+EDYI +L+ + +++ + + F + +
Sbjct: 71 HAWIGMRHILEDYITLPVLRQLGVWITGSILFAYLFFGMIII 112
>gi|311104830|ref|YP_003977683.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Achromobacter xylosoxidans A8]
gi|310759519|gb|ADP14968.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Achromobacter xylosoxidans A8]
Length = 127
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN-----VAVASIMGL 72
A G FI QR TA+ + + + + YE ++ + + L
Sbjct: 16 AHYGVMDFIIQRITAVIMAVYTLVLLIGILMMPAFTYEHWTALFNFYVGVLPVGQILATL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
I+++ H +G++ I DY+ ++++ + L+ F+
Sbjct: 76 AFIALAWHAWIGVRDIWMDYVKSVGVRLLLQVLTIL--WLVGSVVYFA 121
>gi|85058851|ref|YP_454553.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Sodalis glossinidius str. 'morsitans']
gi|84779371|dbj|BAE74148.1| succinate dehydrogenase hydrophobic subunit [Sodalis glossinidius
str. 'morsitans']
Length = 115
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI +II+ + F + Y+ + L SI
Sbjct: 10 RNGVHEWLLVRASAIVICLYIIYLLGFILLADTLTYDVWRGFFATPMTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYI 93
VH +GM ++ DYI
Sbjct: 70 VHTWIGMWQVLTDYI 84
>gi|332160915|ref|YP_004297492.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|325665145|gb|ADZ41789.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330862921|emb|CBX73056.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia enterocolitica W22703]
Length = 115
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + F + D YE ++ L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFVVIVPDITYEIWRGFFASHITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G+ ++ DYI ++++
Sbjct: 70 AHAWIGLWQVLTDYIKPLAVRLVLQLAV 97
>gi|330445466|ref|ZP_08309118.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489657|dbj|GAA03615.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 115
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI + ++ + FF + +E + S ++ L +SI
Sbjct: 10 RNGIHDFILIRATAIILTLYTVYMVGFFAFGPELTFETWSAFFSQISTKVFTMLALVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DYI +L+ F+ + + + F +
Sbjct: 70 VHAWIGLWQVLTDYIKPAVLRAGLQFVVVAVLFVYLFAGFFIV 112
>gi|114563517|ref|YP_751030.1| succinate dehydrogenase, cytochrome b subunit [Shewanella
frigidimarina NCIMB 400]
gi|2239248|emb|CAA74086.1| putative membrane anchor protein subunit [Shewanella frigidimarina
NCIMB 400]
gi|114334810|gb|ABI72192.1| succinate dehydrogenase subunit D [Shewanella frigidimarina NCIMB
400]
Length = 115
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R +A+ + IF + F +E + +++ + + I++
Sbjct: 10 RSGVHDYILLRASAVILACYTIFLVGFIACSAPLTFEIWNGLFASLPMKVFTLITLIALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +G+ ++ DY+ + L+ + F + + +
Sbjct: 70 IHAWIGVWQVLTDYVKHTALRGVLQFTFVLIAFSYLASGIVIV 112
>gi|325982598|ref|YP_004295000.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosomonas sp. AL212]
gi|325532117|gb|ADZ26838.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosomonas sp. AL212]
Length = 117
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 38/89 (42%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G+ ++ QR TAI I ++I ++ Y + + + + + +
Sbjct: 12 AHYGSRDWLLQRVTAILMIIYLIVLVSVLCVAAPQNYAEWKGLFQLQWLRIATFVFFMGM 71
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G++ ++ DY+H +++M
Sbjct: 72 FWHAWVGVRNVLMDYVHSTPIRLMMHIAV 100
>gi|258621143|ref|ZP_05716177.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus VM573]
gi|258626218|ref|ZP_05721066.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus VM603]
gi|262170920|ref|ZP_06038598.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus MB-451]
gi|262404440|ref|ZP_06080995.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. RC586]
gi|258581573|gb|EEW06474.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus VM603]
gi|258586531|gb|EEW11246.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus VM573]
gi|261891996|gb|EEY37982.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
mimicus MB-451]
gi|262349472|gb|EEY98610.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
sp. RC586]
Length = 114
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R +AI + + I+ I F + D Y + L +S+
Sbjct: 10 RNGVHDFLLIRASAIIMVLYTIY-IVSFCAFTDISYVAWTQFFGSTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + +L LF
Sbjct: 69 IHGWIGLWQVLTDYIKCSKLRAGLQLVVIAVLLGYFFSGLF 109
>gi|229589334|ref|YP_002871453.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Pseudomonas fluorescens SBW25]
gi|312959840|ref|ZP_07774356.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens WH6]
gi|229361200|emb|CAY48064.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Pseudomonas fluorescens SBW25]
gi|311286006|gb|EFQ64571.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas fluorescens WH6]
Length = 122
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + YEQ + S+ A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLVANPGIGYEQWHGLFSHNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSA-TAVRFLFQAVCGVAMFA 110
>gi|171059386|ref|YP_001791735.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Leptothrix cholodnii SP-6]
gi|170776831|gb|ACB34970.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Leptothrix cholodnii SP-6]
Length = 120
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ F + + + G YE+ + S + + + IS+
Sbjct: 14 AHYGLRDWLAQRVTAVLMALFTVALLLQVLFGGPIGYERWSGIFSQQWMKVLTFVLIISL 73
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +GM+ I DYI L++ +++ + +
Sbjct: 74 AWHAWVGMRDIWMDYIKPVGLRLSLQVFTLVWLVGTAGWAI 114
>gi|113969972|ref|YP_733765.1| succinate dehydrogenase subunit D [Shewanella sp. MR-4]
gi|117920154|ref|YP_869346.1| succinate dehydrogenase subunit D [Shewanella sp. ANA-3]
gi|113884656|gb|ABI38708.1| succinate dehydrogenase subunit D [Shewanella sp. MR-4]
gi|117612486|gb|ABK47940.1| succinate dehydrogenase subunit D [Shewanella sp. ANA-3]
Length = 115
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 10 RSGVHDFILLRASAVILACYTIFMVGFIACSSPLTYDVWHGLFSALPMKVFTLLALVALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 VHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIV 112
>gi|124267356|ref|YP_001021360.1| succinate dehydrogenase subunit D [Methylibium petroleiphilum PM1]
gi|124260131|gb|ABM95125.1| succinate dehydrogenase subunit D [Methylibium petroleiphilum PM1]
Length = 120
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA F I IA + YE+ + S+ + + + +S+
Sbjct: 14 AHYGLRDWLSQRVTAALMAIFTIVLIAQVLFGAPMGYERWAGIFSSQWMKVLTFVVIVSL 73
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H +G++ I DY+ ++++ + L+
Sbjct: 74 AWHAWVGVRDIWMDYVKPVGVRLLLQVLT--ISWLVGCAG 111
>gi|27363643|ref|NP_759171.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio vulnificus CMCP6]
gi|37679213|ref|NP_933822.1| succinate dehydrogenase, hydrophobic anchor subunit [Vibrio
vulnificus YJ016]
gi|320157044|ref|YP_004189423.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
vulnificus MO6-24/O]
gi|27359759|gb|AAO08698.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio vulnificus CMCP6]
gi|37197956|dbj|BAC93793.1| succinate dehydrogenase, hydrophobic anchor subunit [Vibrio
vulnificus YJ016]
gi|319932356|gb|ADV87220.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
vulnificus MO6-24/O]
Length = 114
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFTDINYASWTQFFGGTFTKVFTMLALASVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + LF
Sbjct: 69 IHAWIGLWQVLTDYIKCAKLRGGLQLGVIALLFGYFFSGLF 109
>gi|238765259|ref|ZP_04626188.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia kristensenii ATCC 33638]
gi|238696531|gb|EEP89319.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia kristensenii ATCC 33638]
Length = 115
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + F + D YE ++ L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFVVIVPDITYEIWRGFFASHITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G+ ++ DYI ++++
Sbjct: 70 AHAWIGLWQVLTDYIKPIAIRLVLQLAV 97
>gi|264679526|ref|YP_003279433.1| succinate dehydrogenase, cytochrome b subunit [Comamonas
testosteroni CNB-2]
gi|262210039|gb|ACY34137.1| succinate dehydrogenase, cytochrome b subunit [Comamonas
testosteroni CNB-2]
Length = 121
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTIS 76
A GT F+ QR TA+ + + + F+ G YEQ + + + + ++
Sbjct: 14 AHYGTRDFLAQRSTAVLMALYTVVLLVRFLTVGGPVGYEQWAGIFAPQWMKFLTLALFVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMF-----LFMNSCFVLLLIIF 116
+ H +G++ I DY+ L++ +++ C + +
Sbjct: 74 LGWHAWIGVRDIWMDYVKPVGLRLALQVVTIVWLVGCISWGIQVL 118
>gi|313680397|ref|YP_004058136.1| succinate dehydrogenase subunit d [Oceanithermus profundus DSM
14977]
gi|313153112|gb|ADR36963.1| succinate dehydrogenase subunit D [Oceanithermus profundus DSM
14977]
Length = 133
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIA---FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + ++ I I Y+ + S S + + +H
Sbjct: 24 WVFMRVSGVLLVFLVLGHIYMNNIMISNTSIDYDYVASRFSQPLIKVYDLVMLALAMLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
G++ +I+DY+H+ + F+ V LLI
Sbjct: 84 TNGLRYVIDDYVHHAGWRSFIKFVLYFLVALLIATG 119
>gi|259909081|ref|YP_002649437.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Erwinia pyrifoliae Ep1/96]
gi|224964703|emb|CAX56220.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia pyrifoliae Ep1/96]
gi|283479107|emb|CAY75023.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia pyrifoliae DSM 12163]
gi|310767019|gb|ADP11969.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Erwinia sp. Ejp617]
Length = 115
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R A+ ++++ +AF + G Y+ ++ L SI
Sbjct: 10 RNGIHDWLLLRAAAMIMTLYVLYILAFIVMSGSLTYDIWRGFFASSFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI L++M + +L+ I+ +
Sbjct: 70 VHGWIGMWQVLTDYIKPLALRMMLQLVVVVALLVYAIYGTVVV 112
>gi|296159710|ref|ZP_06842533.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. Ch1-1]
gi|295890154|gb|EFG69949.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. Ch1-1]
Length = 122
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A+F D Y+ S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITATIMAVYTVILLAWFFGARDFSYDGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGIRLLLQALT--IVWLLACAGYAA 116
>gi|157961609|ref|YP_001501643.1| succinate dehydrogenase hydrophobic membrane anchor [Shewanella
pealeana ATCC 700345]
gi|157846609|gb|ABV87108.1| Succinate dehydrogenase hydrophobic membrane anchor [Shewanella
pealeana ATCC 700345]
Length = 117
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 41/103 (39%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 12 RSGVHDFILIRASAVVLACYTIFLVGFIACSSPLTYDVWHGLFSTLPMKVFTLLALVAVL 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DY+ L+ + F+ + + +
Sbjct: 72 VHAWIGIWQVLTDYVKCVALRGVLQFVFVIAAFSYLAAGILIV 114
>gi|146282235|ref|YP_001172388.1| succinate dehydrogenase (D subunit) [Pseudomonas stutzeri A1501]
gi|145570440|gb|ABP79546.1| succinate dehydrogenase (D subunit) [Pseudomonas stutzeri A1501]
gi|327480483|gb|AEA83793.1| succinate dehydrogenase (D subunit) [Pseudomonas stutzeri DSM 4166]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + + I Y Q ++ S + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFLFLLGYLIANPGLEYTQWHALFSANWMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
SVH +GM I DY+ + + +F
Sbjct: 69 SVHAWVGMWTISTDYLTNMAIGKWA-TGVRFLFQAVCGIAMF 109
>gi|254804832|ref|YP_003083053.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis alpha14]
gi|254668374|emb|CBA05464.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis alpha14]
gi|254671328|emb|CBA08734.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis alpha153]
gi|254672873|emb|CBA07132.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria meningitidis alpha275]
gi|261392703|emb|CAX50276.1| succinate dehydrogenase membrane anchor protein [Neisseria
meningitidis 8013]
gi|316985352|gb|EFV64301.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis H44/76]
gi|319410282|emb|CBY90624.1| succinate dehydrogenase membrane anchor protein [Neisseria
meningitidis WUE 2594]
gi|325128092|gb|EGC50987.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis N1568]
gi|325132168|gb|EGC54864.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M6190]
gi|325134134|gb|EGC56786.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M13399]
gi|325138100|gb|EGC60673.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis ES14902]
gi|325140161|gb|EGC62688.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis CU385]
gi|325142229|gb|EGC64647.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis 961-5945]
gi|325144259|gb|EGC66564.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M01-240013]
gi|325200366|gb|ADY95821.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis H44/76]
gi|325204021|gb|ADY99474.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M01-240355]
gi|325206220|gb|ADZ01673.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M04-240196]
Length = 113
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 108
>gi|170691024|ref|ZP_02882190.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia graminis C4D1M]
gi|170691141|ref|ZP_02882307.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia graminis C4D1M]
gi|323529178|ref|YP_004231330.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1001]
gi|323529266|ref|YP_004231418.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1001]
gi|170144273|gb|EDT12435.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia graminis C4D1M]
gi|170144390|gb|EDT12552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia graminis C4D1M]
gi|323386180|gb|ADX58270.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1001]
gi|323386268|gb|ADX58358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. CCGE1001]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A+F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITACVMALYTVILLAWFFGARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGVRLLLQALT--IVWLLACAGYAA 116
>gi|78062998|ref|YP_372906.1| succinate dehydrogenase subunit D [Burkholderia sp. 383]
gi|77970883|gb|ABB12262.1| succinate dehydrogenase subunit D [Burkholderia sp. 383]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRITATIMAVYTVILLVLFFGAHDFSYEGWASIFAAQWMKLATFVMLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|270157617|ref|ZP_06186274.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|289164010|ref|YP_003454148.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
gi|269989642|gb|EEZ95896.1| succinate dehydrogenase [Legionella longbeachae D-4968]
gi|288857183|emb|CBJ11001.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella longbeachae NSW150]
Length = 119
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR +A+ + FFI + Y + + + + S+
Sbjct: 13 GNGLRDWLVQRISALILAGYFFVVFGFFILHPHLDYMGLRQFFATTWMQVFTLIALFSLF 72
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
VH +G+ +I DY+H L++ + + F+ +
Sbjct: 73 VHAWVGIWTVITDYVHPVALRLSIQVLVIVTLFIYFFWGVEIL 115
>gi|330820917|ref|YP_004349779.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia
gladioli BSR3]
gi|327372912|gb|AEA64267.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia
gladioli BSR3]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR T + + + +A+F D Y+ S+ + + + +++
Sbjct: 16 AHYGLRDWLAQRITGVIMAVYTVILLAWFFAARDFSYDGWASIFATQWMKLATFVTLLAL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|294141509|ref|YP_003557487.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Shewanella violacea DSS12]
gi|293327978|dbj|BAJ02709.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Shewanella violacea DSS12]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +AI + IF + F Y+ + S + + L ++I
Sbjct: 10 RSGVHDFILIRASAIILALYTIFVVGFIALSSPLTYDAWHGLFSALPMKVFTLLALVAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +G+ ++ DY+ +L+ + F+ + + +
Sbjct: 70 IHAWIGVWQVLTDYVKPLMLRGLLQFVVVVAAFSYLAAGILIV 112
>gi|53716138|ref|YP_106307.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei ATCC 23344]
gi|53722740|ref|YP_111725.1| succinate dehydrogenase [Burkholderia pseudomallei K96243]
gi|67642754|ref|ZP_00441506.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei GB8 horse 4]
gi|76817271|ref|YP_335951.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia pseudomallei 1710b]
gi|121597322|ref|YP_991216.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei SAVP1]
gi|124382804|ref|YP_001025627.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei NCTC 10229]
gi|126445800|ref|YP_001077701.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei NCTC 10247]
gi|126458135|ref|YP_001076366.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1106a]
gi|167000016|ref|ZP_02265843.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei PRL-20]
gi|167724523|ref|ZP_02407759.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei DM98]
gi|167743481|ref|ZP_02416255.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 14]
gi|167820667|ref|ZP_02452347.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 91]
gi|167829027|ref|ZP_02460498.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 9]
gi|167850503|ref|ZP_02476011.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei B7210]
gi|167899098|ref|ZP_02486499.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 7894]
gi|167907443|ref|ZP_02494648.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei NCTC 13177]
gi|167915781|ref|ZP_02502872.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 112]
gi|167923620|ref|ZP_02510711.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei BCC215]
gi|217422123|ref|ZP_03453626.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 576]
gi|226195689|ref|ZP_03791276.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei Pakistan 9]
gi|237509002|ref|ZP_04521717.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia pseudomallei MSHR346]
gi|242313245|ref|ZP_04812262.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1106b]
gi|254175975|ref|ZP_04882633.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei ATCC 10399]
gi|254184976|ref|ZP_04891565.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1655]
gi|254186203|ref|ZP_04892721.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei Pasteur 52237]
gi|254194328|ref|ZP_04900760.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei S13]
gi|254203288|ref|ZP_04909649.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei FMH]
gi|254205167|ref|ZP_04911520.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei JHU]
gi|254262820|ref|ZP_04953685.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1710a]
gi|254301257|ref|ZP_04968701.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 406e]
gi|254359293|ref|ZP_04975565.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei 2002721280]
gi|52213154|emb|CAH39193.1| putative succinate dehydrogenase [Burkholderia pseudomallei K96243]
gi|52422108|gb|AAU45678.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei ATCC 23344]
gi|76581744|gb|ABA51218.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia pseudomallei 1710b]
gi|121225120|gb|ABM48651.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei SAVP1]
gi|126231903|gb|ABN95316.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1106a]
gi|126238654|gb|ABO01766.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei NCTC 10247]
gi|147745527|gb|EDK52606.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei FMH]
gi|147754753|gb|EDK61817.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei JHU]
gi|148028480|gb|EDK86440.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei 2002721280]
gi|157811301|gb|EDO88471.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 406e]
gi|157933889|gb|EDO89559.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei Pasteur 52237]
gi|160697017|gb|EDP86987.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei ATCC 10399]
gi|169651079|gb|EDS83772.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei S13]
gi|184215568|gb|EDU12549.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1655]
gi|217394354|gb|EEC34373.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 576]
gi|225932174|gb|EEH28174.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei Pakistan 9]
gi|235001207|gb|EEP50631.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia pseudomallei MSHR346]
gi|238523945|gb|EEP87380.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei GB8 horse 4]
gi|242136484|gb|EES22887.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1106b]
gi|243063969|gb|EES46155.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei PRL-20]
gi|254213822|gb|EET03207.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 1710a]
gi|261826987|gb|ABM99623.2| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia mallei NCTC 10229]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTASVMAIYTVILLVWFFIARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|170726187|ref|YP_001760213.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella woodyi ATCC 51908]
gi|169811534|gb|ACA86118.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella woodyi ATCC 51908]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 10 RSGVHDFILIRSSAVVLAIYTIFLVGFIACSSPLTYDAWHGLFSALPMKVFTLLALVAVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ +L+ + F+F+ + F L +
Sbjct: 70 IHAWIGIWQVLTDYVKPLMLRGVLQFVFVVAAFSYLAAGILIV 112
>gi|104782664|ref|YP_609162.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas entomophila L48]
gi|95111651|emb|CAK16372.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas entomophila L48]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLAAHPGIDYAQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSA-TAIRFLFQAVCGVAMFA 110
>gi|91793540|ref|YP_563191.1| succinate dehydrogenase, cytochrome b subunit [Shewanella
denitrificans OS217]
gi|91715542|gb|ABE55468.1| succinate dehydrogenase subunit D [Shewanella denitrificans OS217]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R +A+ + IF + F ++ + S + + + I++
Sbjct: 10 RSGVHDYILLRASAVILACYTIFLVGFIACSSPLTFDIWHGLFSTLPMKVFTLVTLIALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 IHAWIGIWQVLTDYVKSTALRGVLQFTFVVTAFSYLAAGIIIV 112
>gi|167624414|ref|YP_001674708.1| succinate dehydrogenase hydrophobic membrane anchor [Shewanella
halifaxensis HAW-EB4]
gi|167354436|gb|ABZ77049.1| Succinate dehydrogenase hydrophobic membrane anchor [Shewanella
halifaxensis HAW-EB4]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S +++ L I++
Sbjct: 10 RSGVHDFILIRASAVVLAFYTIFLVGFIACSSPVTYDVWHGLFSTLSMKVFTVLALIAVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+F+ + F L+ +
Sbjct: 70 VHAWIGIWQVLTDYVKCISLRGVLQFVFVIAAFCYLVAGILIV 112
>gi|126174731|ref|YP_001050880.1| putative succinate dehydrogenase, hydrophobic subunit [Shewanella
baltica OS155]
gi|153001030|ref|YP_001366711.1| succinate dehydrogenase hydrophobic membrane anchor [Shewanella
baltica OS185]
gi|160875743|ref|YP_001555059.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS195]
gi|217973010|ref|YP_002357761.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS223]
gi|304409108|ref|ZP_07390729.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS183]
gi|307303111|ref|ZP_07582866.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica BA175]
gi|125997936|gb|ABN62011.1| succinate dehydrogenase subunit D [Shewanella baltica OS155]
gi|151365648|gb|ABS08648.1| Succinate dehydrogenase hydrophobic membrane anchor [Shewanella
baltica OS185]
gi|160861265|gb|ABX49799.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS195]
gi|217498145|gb|ACK46338.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS223]
gi|304352929|gb|EFM17326.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS183]
gi|306913471|gb|EFN43893.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica BA175]
gi|315267932|gb|ADT94785.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Shewanella baltica OS678]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R +A+ + IF + F Y+ S+ S + + L +++
Sbjct: 10 RSGVHDYILLRASAVILACYTIFLVGFIACSSPLTYDVWHSLFSALPMKVFTLLALVALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 VHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIV 112
>gi|317491183|ref|ZP_07949619.1| succinate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920730|gb|EFV42053.1| succinate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 120
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 45/117 (38%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
M + + ++G ++ R AI ++++ + F Y ++
Sbjct: 1 MVTPNSKSSASALGRNGVHDWLLLRAAAIVITLYVLYILGFIFTADSLTYGIWRGFFASN 60
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
L +SI H +GM ++ DYI L+++ + +++ +++ +
Sbjct: 61 ITKVFTVLTLVSILAHAWIGMWQVLTDYIKPLALRLILQLVIVVALVVYLVYGTLVV 117
>gi|88860186|ref|ZP_01134825.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas tunicata D2]
gi|88818180|gb|EAR27996.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas tunicata D2]
Length = 117
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + +F + +FI + +E + +N+A+ + +
Sbjct: 12 RDGVQDFVSLRATALVLAAYALFILGYFIATPEVTFEAWQGLFANLAMKVFTLAALVCMM 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H ++G+ ++ DYI L+ + F+ + + LF
Sbjct: 72 IHTRIGLWQVLTDYIKCAKLRAILSFVLNLMAFAYVAVGLF 112
>gi|292487650|ref|YP_003530523.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia amylovora CFBP1430]
gi|292898887|ref|YP_003538256.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia amylovora ATCC 49946]
gi|291198735|emb|CBJ45844.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia amylovora ATCC 49946]
gi|291553070|emb|CBA20115.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia amylovora CFBP1430]
gi|312171758|emb|CBX80016.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia amylovora ATCC BAA-2158]
Length = 116
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R A+ ++++ +AF + G Y+ ++ L SI
Sbjct: 10 RNGIHDWLLLRAAAMIMTLYVLYILAFIVMSGTLTYDIWRGFFASSFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI L++M + +L+ I+ +
Sbjct: 70 VHGWIGMWQVLTDYIKPLALRMMLQLVVVVALLVYAIYGTVVV 112
>gi|59801318|ref|YP_208030.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria gonorrhoeae FA 1090]
gi|194098443|ref|YP_002001502.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae NCCP11945]
gi|239998842|ref|ZP_04718766.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae 35/02]
gi|240014243|ref|ZP_04721156.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae DGI18]
gi|240016679|ref|ZP_04723219.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae FA6140]
gi|240080868|ref|ZP_04725411.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae FA19]
gi|240112768|ref|ZP_04727258.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae MS11]
gi|240117814|ref|ZP_04731876.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID1]
gi|240121806|ref|ZP_04734768.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID24-1]
gi|240123369|ref|ZP_04736325.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID332]
gi|240125617|ref|ZP_04738503.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-92-679]
gi|240128073|ref|ZP_04740734.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-93-1035]
gi|254493628|ref|ZP_05106799.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae 1291]
gi|260440670|ref|ZP_05794486.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae DGI2]
gi|268594685|ref|ZP_06128852.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae 35/02]
gi|268596985|ref|ZP_06131152.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae FA19]
gi|268598836|ref|ZP_06133003.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae MS11]
gi|268603514|ref|ZP_06137681.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID1]
gi|268681994|ref|ZP_06148856.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID332]
gi|268684206|ref|ZP_06151068.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-92-679]
gi|268686462|ref|ZP_06153324.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-93-1035]
gi|291043979|ref|ZP_06569695.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae DGI2]
gi|293399178|ref|ZP_06643343.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria gonorrhoeae F62]
gi|59718213|gb|AAW89618.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria gonorrhoeae FA 1090]
gi|193933733|gb|ACF29557.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae NCCP11945]
gi|226512668|gb|EEH62013.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae 1291]
gi|268548074|gb|EEZ43492.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae 35/02]
gi|268550773|gb|EEZ45792.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae FA19]
gi|268582967|gb|EEZ47643.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae MS11]
gi|268587645|gb|EEZ52321.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID1]
gi|268622278|gb|EEZ54678.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae PID332]
gi|268624490|gb|EEZ56890.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-92-679]
gi|268626746|gb|EEZ59146.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae SK-93-1035]
gi|291012442|gb|EFE04431.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria gonorrhoeae DGI2]
gi|291610592|gb|EFF39702.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria gonorrhoeae F62]
gi|317164129|gb|ADV07670.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 113
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G ++ QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALP-KEYPAWQAFFSQAWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|325130093|gb|EGC52878.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis OX99.30304]
Length = 113
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|212635739|ref|YP_002312264.1| succinate dehydrogenase, hydrophobic subunit [Shewanella
piezotolerans WP3]
gi|212557223|gb|ACJ29677.1| Succinate dehydrogenase, hydrophobic subunit, putative [Shewanella
piezotolerans WP3]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L ++I
Sbjct: 10 RSGVHDFILIRASAVILACYTIFMVGFIACSSPLTYDAWHGLFSALPMKVFTLLALVAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+F+ + F L +
Sbjct: 70 VHAWIGIWQVLTDYVKCVSLRGVLQFVFVVAAFSYLAAGILIV 112
>gi|221065941|ref|ZP_03542046.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Comamonas testosteroni KF-1]
gi|220710964|gb|EED66332.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Comamonas testosteroni KF-1]
Length = 121
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTIS 76
A GT F+ QR TA+ + + + F+ YEQ + S + + ++
Sbjct: 14 AHYGTRDFLAQRSTAVLMALYTVVLLVRFLTVSGPVGYEQWAGIFSPQWMKFLTLALFVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H +G++ I DY+ L++ + V L+
Sbjct: 74 LGWHAWIGVRDIWMDYVKPVGLRLALQVVT--IVWLVGCIG 112
>gi|28275225|ref|NP_783480.1| succinate dehydrogenase hydrophobic subunit [Shewanella oneidensis
MR-1]
Length = 117
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L +++
Sbjct: 12 RSGVHDFILLRASAVILACYTIFMVGFIACSSPLTYDAWHGLFSALPMKVFTLLTLVALL 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 72 VHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIV 114
>gi|119945915|ref|YP_943595.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Psychromonas ingrahamii 37]
gi|119864519|gb|ABM03996.1| succinate dehydrogenase subunit D [Psychromonas ingrahamii 37]
Length = 114
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + ++++ + F + D Y V S I++
Sbjct: 10 RNGVHDYVLTRASAIIILAYVLYLVGFV-TFADIDYFTWVDFFSLTLTKVFTLFALIAML 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DY+ LL+ F+ + + +IF
Sbjct: 69 VHSWIGLWQVLTDYVKNALLRAALQFLLTSTAFVYVIFGFV 109
>gi|254468528|ref|ZP_05081934.1| succinate dehydrogenase, hydrophobic membrane anchor protein [beta
proteobacterium KB13]
gi|207087338|gb|EDZ64621.1| succinate dehydrogenase, hydrophobic membrane anchor protein [beta
proteobacterium KB13]
Length = 115
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QRF+A FI + I +++ Y+ V ++ SI+ + +
Sbjct: 11 GGMTQWLYQRFSAFCLYFFIGYLIFNWVQIDHLDYQAWVDFFQSIIHRSIITILFLITFF 70
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
H +G+Q +I+DYI + + + ++L IIF + LL I
Sbjct: 71 HGWIGVQHVIDDYIKNKWMNQTIYLILLFSMVLQIIFLVLFLLDI 115
>gi|134278534|ref|ZP_01765248.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 305]
gi|134250318|gb|EBA50398.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 305]
Length = 122
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + +F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTASVMAIYTVILLVWFFIARDFSYEGWASIFATRWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|317401833|gb|EFV82443.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Achromobacter xylosoxidans C54]
Length = 127
Score = 52.0 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN-----VAVASIMGL 72
A G FI QR TA+ + + + + YE ++ + + L
Sbjct: 16 AHYGVMDFIIQRITAVIMAVYTLVLLIGILLMPAFTYESWHALFTFYVGVLPVGQILATL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
++++ H +G++ I DY+ L+++ + L+ F+
Sbjct: 76 AFVALAWHAWIGVRDIWMDYVKPVGLRLLLQVLTIL--WLIGSVVYFA 121
>gi|299530385|ref|ZP_07043808.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Comamonas testosteroni S44]
gi|298721610|gb|EFI62544.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Comamonas testosteroni S44]
Length = 121
Score = 52.0 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTIS 76
A GT F+ QR TA+ + + + F+ G YEQ + + + + ++
Sbjct: 14 AHYGTRDFLAQRSTAVLMALYTVVLLVRFLTVGGPVGYEQWAGIFAPQWMKFLTLALFVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H +G++ I DY+ L++ + V L+
Sbjct: 74 LGWHAWIGVRDIWMDYVKPVGLRLALQVVT--IVWLVGCIG 112
>gi|148978235|ref|ZP_01814753.1| succinate dehydrogenase, hydrophobic anchor subunit [Vibrionales
bacterium SWAT-3]
gi|145962536|gb|EDK27813.1| succinate dehydrogenase, hydrophobic anchor subunit [Vibrionales
bacterium SWAT-3]
Length = 114
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L S+
Sbjct: 10 RNGVHDFLLIRATAIIMTLYTIYLV-SFCAFTDISYVSWTQFFGGTFTKVFTMLALTSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DYI L++ +L LF
Sbjct: 69 VHAWIGLWQVLTDYIKCAKLRVGLQVGVVAVLLGYFFSGLF 109
>gi|325275375|ref|ZP_08141321.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas sp. TJI-51]
gi|324099492|gb|EGB97392.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas sp. TJI-51]
Length = 122
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYVVAHPGIDYTQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSA-TAIRFLFQAVCGVAMFA 110
>gi|308186068|ref|YP_003930199.1| succinate dehydrogenase, hydrophobic subunit [Pantoea vagans C9-1]
gi|308056578|gb|ADO08750.1| succinate dehydrogenase, hydrophobic subunit [Pantoea vagans C9-1]
Length = 115
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TAI +I++ + F + Y+ ++ L SI
Sbjct: 10 RNGIQDWLLLRATAILITLYIVYILGFVVMTDTLTYDLWRGFFASAFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
+H +GM ++ DY+ +++ F
Sbjct: 70 IHGWIGMWQVLTDYVKSLPTRLLLQF 95
>gi|296314765|ref|ZP_06864706.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria polysaccharea ATCC 43768]
gi|296838409|gb|EFH22347.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria polysaccharea ATCC 43768]
Length = 113
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVTLLVVLFALP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 108
>gi|77457838|ref|YP_347343.1| succinate dehydrogenase subunit D [Pseudomonas fluorescens Pf0-1]
gi|77381841|gb|ABA73354.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Pseudomonas fluorescens Pf0-1]
Length = 122
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + Y+Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYLAANPGIGYDQWHGLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSA-TAVRFLFQAVCGVAMFA 110
>gi|220934638|ref|YP_002513537.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995948|gb|ACL72550.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. HL-EbGR7]
Length = 115
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 46/106 (43%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G G ++ QR TA+ +I+ + + G +++ L + +
Sbjct: 6 SGMGAWLWQRLTALYLGVYILVLLLALVLSGGPSAGAWQGWMTHPGALLASALFLGAWLM 65
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
H +G++ ++ DY+H ++ L + F+L I+ F L++ A
Sbjct: 66 HAWIGLRDVVVDYVHPFGARVTVLVAVALFLLSCGIWGTFILIQAA 111
>gi|120610877|ref|YP_970555.1| succinate dehydrogenase subunit D [Acidovorax citrulli AAC00-1]
gi|120589341|gb|ABM32781.1| succinate dehydrogenase subunit D [Acidovorax citrulli AAC00-1]
Length = 121
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A GT +I QR TA F + +A + Y++ + + + + +
Sbjct: 14 AHYGTRDWISQRVTAALMAVFTLVVLAQLVLTKGPIGYDRWAGIFAAQWMKVLTFSVIVG 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
++ H +GM+ + DY+ L++ + +++ + +
Sbjct: 74 LAWHAWVGMRDVWMDYVKPVGLRLALQAVTIFWLVGCAGWGI 115
>gi|26990884|ref|NP_746309.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida KT2440]
gi|148546900|ref|YP_001267002.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida F1]
gi|167034758|ref|YP_001669989.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida GB-1]
gi|170722679|ref|YP_001750367.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida W619]
gi|24985897|gb|AAN69773.1|AE016613_8 succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida KT2440]
gi|148510958|gb|ABQ77818.1| succinate dehydrogenase subunit D [Pseudomonas putida F1]
gi|166861246|gb|ABY99653.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida GB-1]
gi|169760682|gb|ACA73998.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas putida W619]
gi|313497962|gb|ADR59328.1| SdhD [Pseudomonas putida BIRD-1]
Length = 122
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F I + + + Y Q + SN A+ L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFLFLIGYVVAHPGIDYTQWHGLFSNNAMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMSFGKSA-TAIRFLFQAVCGVAMFA 110
>gi|218768033|ref|YP_002342545.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria meningitidis Z2491]
gi|121052041|emb|CAM08350.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria meningitidis Z2491]
Length = 113
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 108
>gi|312884959|ref|ZP_07744649.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio caribbenthicus ATCC BAA-2122]
gi|309367436|gb|EFP94998.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio caribbenthicus ATCC BAA-2122]
Length = 114
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ R TAI + I+ + F + D Y L S+
Sbjct: 10 RNGVHDFLLVRATAIIMTLYTIYLV-SFCAFTDISYVSWTQFFGGTFTKVFTMLALASLL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ VL LF
Sbjct: 69 IHAWIGLWQVLTDYIKSTKLRGGLQLGVIAVVLSYFFSGLF 109
>gi|126444145|ref|YP_001063465.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 668]
gi|126223636|gb|ABN87141.1| succinate dehydrogenase, hydrophobic membrane anchor subunit
[Burkholderia pseudomallei 668]
Length = 122
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + + D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTASVMAIYTVILLVWLFIARDFSYEGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DYI ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYIKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|304395704|ref|ZP_07377587.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pantoea sp. aB]
gi|304356998|gb|EFM21362.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pantoea sp. aB]
Length = 115
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 38/86 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TAI +I++ + F + Y+ ++ L SI
Sbjct: 10 RNGIQDWLLLRATAILITLYIVYILGFVVMTDTLTYDLWRGFFASAFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
VH +GM ++ DY+ ++++ F
Sbjct: 70 VHGWIGMWQVLTDYVKSLPVRLLLQF 95
>gi|15642090|ref|NP_231722.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586933|ref|ZP_01676713.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 2740-80]
gi|121727376|ref|ZP_01680515.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae V52]
gi|147674183|ref|YP_001217615.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae O395]
gi|153213702|ref|ZP_01948954.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 1587]
gi|153801974|ref|ZP_01956560.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae MZO-3]
gi|153818373|ref|ZP_01971040.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae NCTC 8457]
gi|153821671|ref|ZP_01974338.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae B33]
gi|153831295|ref|ZP_01983962.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 623-39]
gi|227082216|ref|YP_002810767.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae M66-2]
gi|229507821|ref|ZP_04397326.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae BX 330286]
gi|229511942|ref|ZP_04401421.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae B33]
gi|229513745|ref|ZP_04403207.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae TMA 21]
gi|229519078|ref|ZP_04408521.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae RC9]
gi|229522047|ref|ZP_04411464.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae TM 11079-80]
gi|229524096|ref|ZP_04413501.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae bv. albensis VL426]
gi|229528894|ref|ZP_04418284.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae 12129(1)]
gi|229607366|ref|YP_002878014.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae MJ-1236]
gi|254286793|ref|ZP_04961746.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae AM-19226]
gi|254849176|ref|ZP_05238526.1| succinate dehydrogenase [Vibrio cholerae MO10]
gi|255745167|ref|ZP_05419116.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholera CIRS 101]
gi|262155975|ref|ZP_06029096.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae INDRE 91/1]
gi|262167709|ref|ZP_06035412.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae RC27]
gi|262190296|ref|ZP_06048564.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae CT 5369-93]
gi|297579594|ref|ZP_06941522.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae RC385]
gi|298497884|ref|ZP_07007691.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae MAK 757]
gi|9656639|gb|AAF95236.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548869|gb|EAX58912.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 2740-80]
gi|121630268|gb|EAX62666.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae V52]
gi|124115763|gb|EAY34583.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 1587]
gi|124122488|gb|EAY41231.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae MZO-3]
gi|126511063|gb|EAZ73657.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae NCTC 8457]
gi|126520769|gb|EAZ77992.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae B33]
gi|146316066|gb|ABQ20605.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae O395]
gi|148873226|gb|EDL71361.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae 623-39]
gi|150423084|gb|EDN15032.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae AM-19226]
gi|227010104|gb|ACP06316.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae M66-2]
gi|227013987|gb|ACP10197.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae O395]
gi|229332668|gb|EEN98154.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae 12129(1)]
gi|229337677|gb|EEO02694.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae bv. albensis VL426]
gi|229340972|gb|EEO05977.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae TM 11079-80]
gi|229343767|gb|EEO08742.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae RC9]
gi|229348926|gb|EEO13883.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae TMA 21]
gi|229351907|gb|EEO16848.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae B33]
gi|229355326|gb|EEO20247.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae BX 330286]
gi|229370021|gb|ACQ60444.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae MJ-1236]
gi|254844881|gb|EET23295.1| succinate dehydrogenase [Vibrio cholerae MO10]
gi|255736997|gb|EET92393.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholera CIRS 101]
gi|262023914|gb|EEY42612.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae RC27]
gi|262030286|gb|EEY48929.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae INDRE 91/1]
gi|262033825|gb|EEY52297.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae CT 5369-93]
gi|297537188|gb|EFH76021.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae RC385]
gi|297542217|gb|EFH78267.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio cholerae MAK 757]
gi|327484622|gb|AEA79029.1| Succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
cholerae LMA3894-4]
Length = 114
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI + + I+ I F + D Y + L +S+
Sbjct: 10 RNGVHDYLLIRASAIILVLYTIY-IVSFCAFTDISYVAWTQFFGSTFTKVFTMLALVSVL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DYI L+ + +L LF
Sbjct: 69 IHGWIGLWQVLTDYIKCSKLRAGLQLVVIAVLLGYFFSGLF 109
>gi|317047342|ref|YP_004114990.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pantoea sp. At-9b]
gi|316948959|gb|ADU68434.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pantoea sp. At-9b]
Length = 115
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R AI +I++ + F + G Y+ ++ L SI
Sbjct: 10 RNGIHDWLLLRAAAILITLYILYILGFVVMTGTLTYDVWRGFFASSFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ +++ + +L I+ +
Sbjct: 70 IHGWIGMWQVLTDYVKPLATRLVLQLVIVVALLSYAIYGTVVV 112
>gi|209521207|ref|ZP_03269930.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. H160]
gi|209498349|gb|EDZ98481.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Burkholderia sp. H160]
Length = 122
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 41/101 (40%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + +A+F D Y+ S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTACVMAVYTVILLAWFFLARDFSYDGWASIFATQWMKLATFVTLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I DY+ ++ + ++L +
Sbjct: 76 FYHAWVGIRDIWMDYVKPVGARLFLQALTILWLLASAGYAA 116
>gi|304310234|ref|YP_003809832.1| Succinate dehydrogenase, membrane anchor subunit [gamma
proteobacterium HdN1]
gi|301795967|emb|CBL44168.1| Succinate dehydrogenase, membrane anchor subunit [gamma
proteobacterium HdN1]
Length = 122
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A+ G ++ QR +A+ + +F + + Y ++ S + L ISI
Sbjct: 9 ARSGLYDWMAQRVSAVVIAAYSLFLMGYLFFGATPDYAAWHALFSQTWMRIFSLLALISI 68
Query: 78 SVHMQLGMQVIIEDYIHYRLL--KIMFLFMNSCFVLLLIIFCLF 119
+VH +GM I DY+ RLL K L + V ++ F +F
Sbjct: 69 AVHAWVGMWTITTDYLTTRLLGPKGTALRFGAQVVCGILNFVVF 112
>gi|87119171|ref|ZP_01075069.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas sp. MED121]
gi|86165562|gb|EAQ66829.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas sp. MED121]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +AI + +F I + + + Y+Q ++ + + +SI
Sbjct: 10 RSGLYDWMVQRVSAIVLSLYTVFIIGYLVMNPELTYDQWSALFEATWMRIFTLMTLLSIG 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +G+ I DY+ ++ F +
Sbjct: 70 VHSWIGLWSISTDYLKATGVRFFFQSL 96
>gi|254248723|ref|ZP_04942043.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia
cenocepacia PC184]
gi|124875224|gb|EAY65214.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia
cenocepacia PC184]
Length = 122
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + F D YE S+ + + + +S+
Sbjct: 16 AHYGLRDWLAQRVTATITAVYTVILLVLFFGAHDFSYEGWASIFAAQWMKLATFVMLLSL 75
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +G++ I DY+ ++++ + V LL +
Sbjct: 76 FYHAWVGVRDIWMDYVKPVGVRLLLQSLT--IVWLLACAGYAA 116
>gi|22126946|ref|NP_670369.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis KIM 10]
gi|45440880|ref|NP_992419.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis biovar Microtus str. 91001]
gi|51595488|ref|YP_069679.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pseudotuberculosis IP 32953]
gi|108806585|ref|YP_650501.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Antiqua]
gi|108813048|ref|YP_648815.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Nepal516]
gi|145599852|ref|YP_001163928.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Pestoides F]
gi|149366890|ref|ZP_01888924.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia pestis CA88-4125]
gi|153949963|ref|YP_001401847.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pseudotuberculosis IP 31758]
gi|162421861|ref|YP_001605907.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Angola]
gi|165924328|ref|ZP_02220160.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165938275|ref|ZP_02226833.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166011542|ref|ZP_02232440.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211707|ref|ZP_02237742.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167400068|ref|ZP_02305586.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419680|ref|ZP_02311433.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423845|ref|ZP_02315598.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468942|ref|ZP_02333646.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis FV-1]
gi|170025193|ref|YP_001721698.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pseudotuberculosis YPIII]
gi|186894541|ref|YP_001871653.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pseudotuberculosis PB1/+]
gi|218928278|ref|YP_002346153.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis CO92]
gi|229841046|ref|ZP_04461205.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843150|ref|ZP_04463296.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis biovar Orientalis str. India 195]
gi|229893987|ref|ZP_04509173.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis Pestoides A]
gi|229903489|ref|ZP_04518602.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis Nepal516]
gi|270487271|ref|ZP_06204345.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis KIM D27]
gi|294503117|ref|YP_003567179.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Z176003]
gi|21959987|gb|AAM86620.1|AE013908_3 succinate dehydrogenase, hydrophobic subunit [Yersinia pestis KIM
10]
gi|45435738|gb|AAS61296.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia pestis biovar Microtus str. 91001]
gi|51588770|emb|CAH20384.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia pseudotuberculosis IP 32953]
gi|108776696|gb|ABG19215.1| succinate dehydrogenase subunit D [Yersinia pestis Nepal516]
gi|108778498|gb|ABG12556.1| succinate dehydrogenase subunit D [Yersinia pestis Antiqua]
gi|115346889|emb|CAL19776.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia pestis CO92]
gi|145211548|gb|ABP40955.1| succinate dehydrogenase subunit D [Yersinia pestis Pestoides F]
gi|149291264|gb|EDM41339.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Yersinia pestis CA88-4125]
gi|152961458|gb|ABS48919.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354676|gb|ABX88624.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis Angola]
gi|165913653|gb|EDR32272.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923388|gb|EDR40520.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165989490|gb|EDR41791.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207478|gb|EDR51958.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962421|gb|EDR58442.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050776|gb|EDR62184.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056694|gb|EDR66457.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751727|gb|ACA69245.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pseudotuberculosis YPIII]
gi|186697567|gb|ACC88196.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pseudotuberculosis PB1/+]
gi|229679259|gb|EEO75362.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis Nepal516]
gi|229689497|gb|EEO81558.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis biovar Orientalis str. India 195]
gi|229697412|gb|EEO87459.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229703872|gb|EEO90885.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis Pestoides A]
gi|262361153|gb|ACY57874.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis D106004]
gi|262365293|gb|ACY61850.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis D182038]
gi|270335775|gb|EFA46552.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Yersinia pestis KIM D27]
gi|294353576|gb|ADE63917.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Yersinia pestis Z176003]
gi|320014249|gb|ADV97820.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++ + + F + D YE ++ L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYVFYILGFVVIVPDITYEIWRGFFASHITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H +G+ ++ DYI ++++ +
Sbjct: 70 AHAWIGLWQVLTDYIKPLAIRLVLQLVV 97
>gi|329295933|ref|ZP_08253269.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Plautia stali symbiont]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R AI +I++ + F + G Y+ ++ L SI
Sbjct: 10 RNGIHDWLLLRAAAILITLYILYILGFVVMTGTLTYDVWRGFFASSFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DY+ +++ + +L I+ +
Sbjct: 70 VHGWIGMWQVLTDYVKPLATRLLLQLVIVVALLSYAIYGTVVV 112
>gi|83647435|ref|YP_435870.1| succinate dehydrogenase, hydrophobic anchor subunit [Hahella
chejuensis KCTC 2396]
gi|83635478|gb|ABC31445.1| Succinate dehydrogenase, hydrophobic anchor subunit [Hahella
chejuensis KCTC 2396]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR +A+ + F + + D YE ++ + + +++
Sbjct: 10 RSGAYDWMVQRVSAVVLALYTAFMVGVLVFTPDLTYEVWSALFAKTWMRIFSLAALVALG 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM--NSCFVLLLIIFCLF 119
H +G+ I DY+ +++ + FV + +
Sbjct: 70 AHAWIGLWTITTDYMKNGVIRFVAQAACGTIMFVYFIWGVQIL 112
>gi|293604091|ref|ZP_06686501.1| succinate dehydrogenase cytochrome b small subunit [Achromobacter
piechaudii ATCC 43553]
gi|292817515|gb|EFF76586.1| succinate dehydrogenase cytochrome b small subunit [Achromobacter
piechaudii ATCC 43553]
Length = 127
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSN-----VAVASIMGL 72
A G FI QR TA+ + + + + YE V + + + L
Sbjct: 16 AHYGVMDFIVQRITAVIMAVYTLVLLVGILMMPAFTYEHWVKLFTFYVGIIPVGQILASL 75
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
I+++ H +G++ I DY+ L+++ + L+ F+
Sbjct: 76 AFIALAWHAWIGVRDIWMDYVKPVGLRLLLQVLTIL--WLVGTVVYFA 121
>gi|238793883|ref|ZP_04637503.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia intermedia ATCC 29909]
gi|238726786|gb|EEQ18320.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia intermedia ATCC 29909]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI +I++ + F D YE ++ L +SI
Sbjct: 10 RNGVHDWLLLRASAIVITLYILYILGFVAIVPDITYEVWRGFFASHITKVFTLLTLLSIL 69
Query: 79 VHMQLGMQVIIEDYI 93
H +G+ ++ DYI
Sbjct: 70 AHAWIGLWQVLTDYI 84
>gi|326317738|ref|YP_004235410.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374574|gb|ADX46843.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 121
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A GT ++ QR TA F + +A + Y++ + + + +
Sbjct: 14 AHYGTRDWLSQRVTAALMAVFTLVVLAQLVLTKGPIGYDRWAGIFGAQWMKVLTFSVIVG 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
++ H +GM+ + DY+ L++ + +++ + +
Sbjct: 74 LAWHAWVGMRDVWMDYVKPVGLRLALQAVTIFWLVGCAGWGI 115
>gi|224824512|ref|ZP_03697619.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Lutiella nitroferrum 2002]
gi|224603005|gb|EEG09181.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Lutiella nitroferrum 2002]
Length = 114
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + F + + YE + V + +++
Sbjct: 9 AHYGLRDWVLQRVTAVIMAIYTFALVLFLLAMP-SSYEGWKAFFGQTWVQVLTQTTLLAV 67
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMF--LFMNSCFVLLLIIFCLF 119
+H +G++ + DYI +++ L + ++ +
Sbjct: 68 FMHAWVGIRDLWMDYIKPVGVRLTLHVLTLVWLVSCVIYSIKVV 111
>gi|157375952|ref|YP_001474552.1| putative succinate dehydrogenase, hydrophobic subunit [Shewanella
sediminis HAW-EB3]
gi|157318326|gb|ABV37424.1| conserved hypothetical succinate dehydrogenase, hydrophobic subunit
[Shewanella sediminis HAW-EB3]
Length = 115
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +AI + IF + F Y+ + S +++ L +S+
Sbjct: 10 RSGVHDFILIRASAIILTCYTIFLVGFVACSSPLTYDAWHGLFSTLSMKVFTLLALVSVL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK--IMFLFMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ + F+F+ + F L +
Sbjct: 70 IHSWIGIWQVLTDYVKPLALRGVLQFVFVVAAFSYLAAGILIV 112
>gi|296112296|ref|YP_003626234.1| succinate dehydrogenase subunit D [Moraxella catarrhalis RH4]
gi|295919990|gb|ADG60341.1| succinate dehydrogenase subunit D [Moraxella catarrhalis RH4]
gi|326561804|gb|EGE12139.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis 7169]
gi|326563241|gb|EGE13508.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis 46P47B1]
gi|326563355|gb|EGE13620.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis 12P80B1]
gi|326565893|gb|EGE16054.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis 103P14B1]
gi|326568970|gb|EGE19039.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis BC1]
gi|326569269|gb|EGE19330.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis BC7]
gi|326571946|gb|EGE21951.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis BC8]
gi|326575457|gb|EGE25382.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis 101P30B1]
gi|326576454|gb|EGE26362.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis CO72]
gi|326577925|gb|EGE27789.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Moraxella catarrhalis O35E]
Length = 117
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR++ G G G+ +I QR +A+ + + + FF+ + D +E + ++
Sbjct: 1 MRNNSGIKSATGLTGSGSRDWILQRISAVVLAVYSVVMVGFFL-FNDVNFESWQGFMLSL 59
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC--FVLLLIIFCLF 119
+ + +S+ H +GM ++ DY+ L+++ + V L +F
Sbjct: 60 PMKLFSLVAILSLVFHAWVGMWTVLTDYVKSSGLRLVIQSLVIIAVLVYLFWGVMIF 116
>gi|90406984|ref|ZP_01215174.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Psychromonas sp. CNPT3]
gi|90311855|gb|EAS39950.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Psychromonas sp. CNPT3]
Length = 114
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G +I R +A+ + +I++ I FI + D Y S S++ +S+
Sbjct: 10 RSGVHDYILLRASAVILLAYILY-IVGFIAFNDVNYLVWRSFFSSLCTQVFSLFALLSML 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
VH +G+ I+ DYI L+ F+ + + +F F +L
Sbjct: 69 VHAWIGLWQILTDYIKCTRLRGTLQFLLTSVAF-IYVFSGFVIL 111
>gi|325202263|gb|ADY97717.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis M01-240149]
Length = 108
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA+ + + + + Y + S V + I++
Sbjct: 4 AHYGLRDWVMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFSQTWVKVFTQVSFIAV 62
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+H +G++ + DYI +++ +++ +++ +
Sbjct: 63 FLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 103
>gi|296136776|ref|YP_003644018.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thiomonas intermedia K12]
gi|295796898|gb|ADG31688.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thiomonas intermedia K12]
Length = 121
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 46/101 (45%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA F + + +F+ G YE+ + + + + + +++
Sbjct: 15 AHYGLRDWMAQRVTAAVIAVFTLVLLVYFLAPGPLSYERWHDLFAQQWMKLLTFVTVLAL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H+ +GM+ I DY+ ++++ ++L + L
Sbjct: 75 TYHVWVGMRDIWMDYVKPVGVRLLLQIGTILWLLACAGWAL 115
>gi|127512581|ref|YP_001093778.1| putative succinate dehydrogenase, hydrophobic subunit [Shewanella
loihica PV-4]
gi|126637876|gb|ABO23519.1| succinate dehydrogenase subunit D [Shewanella loihica PV-4]
Length = 115
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF + F Y+ + S + + L ++I
Sbjct: 10 RSGVHDFILLRASAVILTCYTIFLVGFIAASAPLTYDVWHGLFSALPMKVFTLLALVAIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
VH +G+ ++ DY+ K + + FV ++ +
Sbjct: 70 VHAWIGIWQVLTDYV-----KPVAVRGVLQFVFVVAALSYLA 106
>gi|295698448|ref|YP_003603103.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Riesia pediculicola USDA]
gi|291157033|gb|ADD79478.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Riesia pediculicola USDA]
Length = 110
Score = 50.8 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
GT ++I R T+I ++ + +F+I F + + + V + S V
Sbjct: 9 SGTKNWIILRITSIISLIY-LFYILIFFSEREIDHTSLQEFFLKRPVKILTIFAVFSTVV 67
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
H +G Q I+ DYI + LKI L ++ +V L F LF L KI
Sbjct: 68 HFLIGTQNILTDYIKNKKLKI--LIYSTLYVFL--AFHLFYLKKIIF 110
>gi|332141294|ref|YP_004427032.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551316|gb|AEA98034.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonas macleodii str. 'Deep
ecotype']
Length = 115
Score = 50.8 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 46/101 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TA + +F FFI + + + + S +A+ +++
Sbjct: 10 RDGVQDYVSLRATAAIIFAYSVFMAWFFITTDNLTFIEWRGLFSGLAMKVFTLAALVAVM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G+ ++ DY+ L+ + ++ + + LF
Sbjct: 70 IHVRIGLWQVLTDYVKATGLRAVLQYILNIIAFGYVAVGLF 110
>gi|226330951|ref|ZP_03806469.1| hypothetical protein PROPEN_04874 [Proteus penneri ATCC 35198]
gi|225201746|gb|EEG84100.1| hypothetical protein PROPEN_04874 [Proteus penneri ATCC 35198]
Length = 114
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++++ + F YE S+ L +SI
Sbjct: 10 RTGIQDWLFLRASAIIIVLYVLYLVGFIATTE-ITYEVWRGFFSSSLTKVFTILTLLSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
+H +GM ++ DYI L++
Sbjct: 69 IHAWIGMWQVLTDYIKPLALRLTLQL 94
>gi|297537887|ref|YP_003673656.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylotenera sp. 301]
gi|297257234|gb|ADI29079.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylotenera sp. 301]
Length = 114
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G ++ QR +A+ + IF +A F+ + Y V + L IS+ +H
Sbjct: 12 GMRAWLTQRLSALVMAVYSIFAVARFLIVQPSNYGAWVDFFQPLWWRIATLLFWISLCIH 71
Query: 81 MQLGMQVIIEDYIHYRLLKIMF--LFMNSCFVLLLII 115
LG++ + +DY+ ++ + L + S +V L+
Sbjct: 72 AWLGIRDVFKDYVPNPSVRDVLDKLLVVSLWVYLVWA 108
>gi|89900589|ref|YP_523060.1| succinate dehydrogenase, cytochrome b subunit [Rhodoferax
ferrireducens T118]
gi|89345326|gb|ABD69529.1| succinate dehydrogenase subunit D [Rhodoferax ferrireducens T118]
Length = 121
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA+ F + +A I Y Q + S + ++ +S
Sbjct: 14 AHYGMRDWLSQRVTAVLMALFTVLVLAELIFTKGPIGYAQWAGIFSPQWMKALTFTVILS 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMF 102
+ H+ +GM+ I +DY+H ++ +
Sbjct: 74 LLYHVWVGMRNIFQDYVHPYGVRFVL 99
>gi|315126698|ref|YP_004068701.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
sdhC [Pseudoalteromonas sp. SM9913]
gi|315015212|gb|ADT68550.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
sdhC [Pseudoalteromonas sp. SM9913]
Length = 115
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + YE + SN+A+ + + I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLAMPEVTYEAWTGLFSNLAMKGATLITLVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH ++G+ ++ DY+ L+ F+ + + + L
Sbjct: 70 VHTRIGLWQVLTDYVKNAKLRAFLGFVLNLMAVAYVAVGLI 110
>gi|309380088|emb|CBX21499.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 113
Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
+++ +H +G++ + DYI +++
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGVRLFLQVAT 96
>gi|255318871|ref|ZP_05360097.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter radioresistens SK82]
gi|255304127|gb|EET83318.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter radioresistens SK82]
Length = 126
Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + G YEQ + V + L +
Sbjct: 11 GLTGSGSRDWYIQRISAVVLAAYTVVVLGWILLNGGFTYEQWSGFMMTVPMKIFSLLAIL 70
Query: 76 SISVHMQLGMQVIIEDYI-------HYRLLKIMFLFMNSCFVLLLIIFCL 118
S+ H +GM + DY+ L+++ V + I+ +
Sbjct: 71 SLIGHAWIGMWQVFTDYVTTRQMGPSANGLRLVLTSAVIIAVFVYAIWGI 120
>gi|262378872|ref|ZP_06072029.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter radioresistens SH164]
gi|262300157|gb|EEY88069.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter radioresistens SH164]
Length = 121
Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + G YEQ + V + L +
Sbjct: 6 GLTGSGSRDWYIQRISAVVLAAYTVVVLGWILLNGGFTYEQWSGFMMTVPMKIFSLLAIL 65
Query: 76 SISVHMQLGMQVIIEDYI-------HYRLLKIMFLFMNSCFVLLLIIFCL 118
S+ H +GM + DY+ L+++ V + I+ +
Sbjct: 66 SLIGHAWIGMWQVFTDYVTTRQMGPSANGLRLVLTSAVIIAVFVYAIWGI 115
>gi|28869398|ref|NP_792017.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|71734632|ref|YP_274201.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|213968187|ref|ZP_03396332.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato T1]
gi|237803490|ref|ZP_04591075.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|257485478|ref|ZP_05639519.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289624404|ref|ZP_06457358.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289646682|ref|ZP_06478025.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|301383808|ref|ZP_07232226.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato Max13]
gi|302059586|ref|ZP_07251127.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato K40]
gi|302133375|ref|ZP_07259365.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852639|gb|AAO55712.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|71555185|gb|AAZ34396.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|213927167|gb|EEB60717.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tomato T1]
gi|320324893|gb|EFW80965.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329259|gb|EFW85256.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330867442|gb|EGH02151.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330875699|gb|EGH09848.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
gi|330880845|gb|EGH14994.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330888151|gb|EGH20812.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330967013|gb|EGH67273.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330987438|gb|EGH85541.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010659|gb|EGH90715.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331018600|gb|EGH98656.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. lachrymans str. M302278PT]
gi|331025472|gb|EGI05528.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 122
Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHDLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSA-TAVRFLFQAVCGVLMFA 110
>gi|332526163|ref|ZP_08402298.1| succinate dehydrogenase subunit D [Rubrivivax benzoatilyticus JA2]
gi|332110003|gb|EGJ10631.1| succinate dehydrogenase subunit D [Rubrivivax benzoatilyticus JA2]
Length = 120
Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA F + + G Y++ + S + + + +S+
Sbjct: 14 AHYGARDWLAQRITAALIALFTFVLLVQLLAPGPLGYDRWAGIFSAQWMKVLTFVVIVSL 73
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H +G++ I DY+ +++ ++ V L+
Sbjct: 74 AWHAWIGIRDIWMDYVRPAGIRLALQVLS--IVWLVGCAG 111
>gi|226951561|ref|ZP_03822025.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter sp.
ATCC 27244]
gi|294651218|ref|ZP_06728546.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|226837703|gb|EEH70086.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter sp.
ATCC 27244]
gi|292822871|gb|EFF81746.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 126
Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + YEQ + + + L +
Sbjct: 11 GLTGSGSRDWYIQRVSAVVLAAYTVVILGWILCNSGFGYEQWAGFMLTLPMKIFSLLAVL 70
Query: 76 SISVHMQLGMQVIIEDYI-------HYRLLKIMFLFMNSCFVLLLIIFCL 118
S+ H +GM + DY+ L+++ V + I+ +
Sbjct: 71 SLVAHAWIGMWQVFTDYVTTRQMGPSASGLRLVLTSAVIISVFVYAIWGI 120
>gi|308050200|ref|YP_003913766.1| succinate dehydrogenase subunit D [Ferrimonas balearica DSM 9799]
gi|307632390|gb|ADN76692.1| succinate dehydrogenase subunit D [Ferrimonas balearica DSM 9799]
Length = 115
Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 44/101 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G F+ R +A+ F++F + F + +E + S+ A+ + +++
Sbjct: 10 RSGVHDFVLLRASALVLASFVLFMVGFLALTPELTFESWHGLFSHTAMKVYTLVSLVALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH +G+ ++ DYI L+ F + +L + +
Sbjct: 70 VHGWIGLWQVLTDYIKPAGLRAFLQFAVNLVLLAYLFAGVV 110
>gi|262371931|ref|ZP_06065210.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter junii SH205]
gi|262311956|gb|EEY93041.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter junii SH205]
Length = 121
Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + YEQ + + + L +
Sbjct: 6 GLTGSGSRDWYIQRVSAVVLAAYTVVMFGWILCNSGFGYEQWAGFMLTLPMKIFSLLAVL 65
Query: 76 SISVHMQLGMQVIIEDYI-------HYRLLKIMFLFMNSCFVLLLIIFCL 118
S+ H +GM + DY+ L+++ V + I+ +
Sbjct: 66 SLVAHAWIGMWQVFTDYVTTRQMGPSASGLRLVLTSAVIISVFVYAIWGI 115
>gi|66045246|ref|YP_235087.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae B728a]
gi|289679939|ref|ZP_06500829.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae FF5]
gi|302187423|ref|ZP_07264096.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae 642]
gi|63255953|gb|AAY37049.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. syringae B728a]
gi|330899181|gb|EGH30600.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. japonica str. M301072PT]
gi|330940368|gb|EGH43473.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330951680|gb|EGH51940.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae Cit 7]
gi|330980728|gb|EGH78831.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 122
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHGLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSA-TAVRFLFQAVCGVLMFA 110
>gi|221134278|ref|ZP_03560583.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Glaciecola sp. HTCC2999]
Length = 115
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 43/101 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TA+ + + FI + + + +++ + +SI
Sbjct: 10 RNGIQDWVSLRATALIIALYSFYLAFVFITTDISSFAIWQGIFASLFMKVFTFAALVSIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G+ ++ DYI L+ ++ + + LF
Sbjct: 70 LHVRIGLWQVLTDYIKPTGLRAGIQYVLNLIAFAYVAVGLF 110
>gi|71908477|ref|YP_286064.1| succinate dehydrogenase subunit D [Dechloromonas aromatica RCB]
gi|71848098|gb|AAZ47594.1| succinate dehydrogenase subunit D [Dechloromonas aromatica RCB]
Length = 115
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + + A + +E V +N + + L +S+
Sbjct: 9 AHYGLKDWIAQRATAVIMAVYSVLIAAVLLVVRPNTFEAWQGVFANGVIKFLTFLFFVSL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMF 102
H +G++ I DY+ +++
Sbjct: 69 FYHAWIGVRDIWMDYVKPTGVRLTL 93
>gi|289209040|ref|YP_003461106.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. K90mix]
gi|288944671|gb|ADC72370.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thioalkalivibrio sp. K90mix]
Length = 112
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G G ++ QR TA+ F+I + +F+ + + V+V+++ AVA L + + +
Sbjct: 5 SGQGAWLLQRITAVYVGLFVILVLGYFLIAPPSDHAAWVAVIAHPAVALGSALFVVLLLL 64
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFM 105
H +G++ ++ DY+ L++ L +
Sbjct: 65 HAWIGLRDVVLDYVKPLALRLTVLTL 90
>gi|212712448|ref|ZP_03320576.1| hypothetical protein PROVALCAL_03542 [Providencia alcalifaciens DSM
30120]
gi|212684905|gb|EEB44433.1| hypothetical protein PROVALCAL_03542 [Providencia alcalifaciens DSM
30120]
Length = 114
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++++ + F D YE ++ L SI
Sbjct: 10 RTGIQDWLLIRGSAIVIVLYVLYIVGFVA-INDITYEVWRGFFASSVTKVFTILTLFSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DY+ ++++
Sbjct: 69 VHAWIGMWQVLTDYVKPLAIRLVLQLA 95
>gi|304387746|ref|ZP_07369926.1| succinate dehydrogenase cytochrome b small subunit [Neisseria
meningitidis ATCC 13091]
gi|304338222|gb|EFM04352.1| succinate dehydrogenase cytochrome b small subunit [Neisseria
meningitidis ATCC 13091]
Length = 113
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFDQVWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 108
>gi|88798679|ref|ZP_01114262.1| Succinate dehydrogenase, hydrophobic anchor subunit [Reinekea sp.
MED297]
gi|88778442|gb|EAR09634.1| Succinate dehydrogenase, hydrophobic anchor subunit [Reinekea sp.
MED297]
Length = 102
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 24 HFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQL 83
++ QR +A+ + +F + + + D +EQ + +++ H+ +
Sbjct: 2 DWLAQRVSAVILGSYAVFMVVYLLASSDLTFEQWQGLFGQFWFKIYTLAALVALVAHIWV 61
Query: 84 GMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
GM + DY+ + + L + F +I F
Sbjct: 62 GMWTVATDYVKNAWSRFIVLGVIALTNFSYFIIGFSAV 99
>gi|121634751|ref|YP_974996.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria meningitidis FAM18]
gi|120866457|emb|CAM10203.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria meningitidis FAM18]
gi|325198182|gb|ADY93638.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria meningitidis G2136]
Length = 108
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G + QR TA+ + + + + Y + S V + I++
Sbjct: 4 AHYGLRDWAMQRATAVIMLIYTVALLVVLFSLP-KEYSAWQAFFSQTWVKVFTQVSFIAV 62
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+H +G++ + DYI +++ +++ +++ +
Sbjct: 63 FLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 103
>gi|330959059|gb|EGH59319.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 122
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 40/100 (40%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPGLSYAQWHDLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
H +GM I DY+ L + F + +
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSATVVRFLFQAVCGVLM 108
>gi|90580051|ref|ZP_01235859.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Vibrio angustum S14]
gi|90438936|gb|EAS64119.1| Putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Vibrio angustum S14]
Length = 115
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI + ++ + FF + +E + ++ L +SI
Sbjct: 10 RNGIHDFILIRATAIILTLYTVYMVGFFAFGSELTFETWSVFFNQISTKVFTMLALVSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +G+ ++ DYI +L++ F+ + + + F +
Sbjct: 70 VHAWIGLWQVLTDYIKPAVLRVGLQFVVVAVLFVYLFAGFFIV 112
>gi|255065300|ref|ZP_05317155.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria sicca ATCC 29256]
gi|255050721|gb|EET46185.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria sicca ATCC 29256]
Length = 113
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVILFTLP-KEYSAWQAFFDQVWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSI 108
>gi|241761112|ref|ZP_04759201.1| hypothetical protein ZmobDRAFT_0278 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374731|gb|EER64192.1| hypothetical protein ZmobDRAFT_0278 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 128
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
++ TA AN+ ++ I F++ + I ++ VA M IS + +
Sbjct: 24 FYKKLTAAANLLLYVWLIVSFLELPVYDFNVIRRWVAQTIVALPMIFLAISTYGYACSFV 83
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + + + F ++++ +FS+LKIA
Sbjct: 84 DKLFSE-ERFPKAGLYFQIAAYFYMIIFAAIAVFSILKIAF 123
>gi|260752924|ref|YP_003225817.1| hypothetical protein Za10_0686 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283856282|ref|YP_162303.2| hypothetical protein ZMO0568 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552287|gb|ACV75233.1| hypothetical protein Za10_0686 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283775278|gb|AAV89192.2| hypothetical protein ZMO0568 [Zymomonas mobilis subsp. mobilis ZM4]
Length = 128
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
++ TA AN+ ++ I F++ + I ++ VA M IS + +
Sbjct: 24 FYKKLTAAANLLLYVWLIVSFLELPVYDFNVIRRWVAQTIVALPMIFLAISTYGYACSFV 83
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
+ + + + F ++++ +FS+LKIA
Sbjct: 84 DKLFSE-ERFPKAGLYFQIAAYFYMIIFAAIAVFSILKIAF 123
>gi|253996131|ref|YP_003048195.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylotenera mobilis JLW8]
gi|253982810|gb|ACT47668.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Methylotenera mobilis JLW8]
Length = 115
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
++ QR +A+A + +++ + Y + +S + + +S+ H LG
Sbjct: 16 WLTQRISAVAMVIYLLLLLLVLAIKQPHDYASWLDFMSPWWWRLLTLVFFVSLLTHAWLG 75
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ + +DY+ L+ + L+ C S++
Sbjct: 76 VRDVFKDYVFNLRLRAVLQVTVDIL--LIGYLCWVSII 111
>gi|241765616|ref|ZP_04763571.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax delafieldii 2AN]
gi|241364554|gb|EER59620.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax delafieldii 2AN]
Length = 121
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA + F + + + Y++ S+ S+ + + ++
Sbjct: 14 AHYGLRDWLSQRVTAALMVLFTLIVLVQLVLTKGPIGYDRWASIFSSQWMKVLTFSVILA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H +GM+ I DYI L+++ +++ + +
Sbjct: 74 LVWHAWVGMRNIWMDYIKPVSLRLVLQIFTIVWLVGCAGWGI 115
>gi|226945048|ref|YP_002800121.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Azotobacter vinelandii DJ]
gi|226719975|gb|ACO79146.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Azotobacter vinelandii DJ]
Length = 122
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + +F + + D Y + + S+ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVILAAYTLFLLGYLFFSSDLSYAEWHGLFSSTGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
SVH +GM I DY+ L + + +F+
Sbjct: 69 SVHAWVGMWTISTDYLTPMALGKLA-TVVRFLFQAACGIAMFA 110
>gi|261364265|ref|ZP_05977148.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria mucosa ATCC 25996]
gi|298369269|ref|ZP_06980587.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria sp. oral taxon 014 str. F0314]
gi|288567508|gb|EFC89068.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria mucosa ATCC 25996]
gi|298283272|gb|EFI24759.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria sp. oral taxon 014 str. F0314]
Length = 113
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVALLVILFTLP-KEYSAWQAFFDQVWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
I++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|93004939|ref|YP_579376.1| succinate dehydrogenase hydrophobic membrane anchor subunit
[Psychrobacter cryohalolentis K5]
gi|92392617|gb|ABE73892.1| succinate dehydrogenase subunit D [Psychrobacter cryohalolentis K5]
Length = 134
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
G+ +I QR +A+ + + + FF+ +GD Y + + ++++ + + ++++
Sbjct: 15 GSGSRDWIVQRISAVVLAVYSVVLLGFFLTHGDVSYTEWSNFMTSLPMRLFSLVAVLALA 74
Query: 79 VHMQLGMQVIIEDYI---------HYRLLKIMFLFMNSCFVLLLIIFCLF 119
H +GM + DYI L + L + + FV L +F
Sbjct: 75 GHAWIGMWTVFTDYITTGKLGASAAGLRLVLQTLMIIAVFVFLFWGIMIF 124
>gi|183598173|ref|ZP_02959666.1| hypothetical protein PROSTU_01552 [Providencia stuartii ATCC 25827]
gi|188020340|gb|EDU58380.1| hypothetical protein PROSTU_01552 [Providencia stuartii ATCC 25827]
Length = 114
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++++ + FI D YE ++ L SI
Sbjct: 10 RTGIQDWLLIRGSAIVIVLYVLYLVG-FIAINDITYETWRGFFASSVTKVFTILTLFSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
VH +G+ ++ DY+ L+++
Sbjct: 69 VHAWIGLWQVLTDYVKPLALRLVLQL 94
>gi|261343508|ref|ZP_05971153.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Providencia rustigianii DSM 4541]
gi|282568654|gb|EFB74189.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Providencia rustigianii DSM 4541]
Length = 114
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI I + +I F+ D YE ++ L SI
Sbjct: 10 RTGIQDWLLIRGSAI-LIVLYVLYIVGFVAINDITYEVWRGFFASSVTKVFTILTLFSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DY+ ++++
Sbjct: 69 VHAWIGMWQVLTDYVKPIAIRLVLQLA 95
>gi|188534434|ref|YP_001908231.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Erwinia tasmaniensis Et1/99]
gi|188029476|emb|CAO97353.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Erwinia tasmaniensis Et1/99]
Length = 115
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R A+ ++++ +AF + G ++ ++ L SI
Sbjct: 10 RNGIHDWLLLRAAAMIMTFYVLYILAFIVMSGPLTFDIWRGFFASSFTKVFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
VH +GM ++ DYI L++M + +L+ I+ +
Sbjct: 70 VHGWIGMWQVLTDYIKPLALRMMLQLVVVVALLVYAIYGTVVV 112
>gi|149374989|ref|ZP_01892762.1| Succinate dehydrogenase, hydrophobic anchor subunit [Marinobacter
algicola DG893]
gi|149360878|gb|EDM49329.1| Succinate dehydrogenase, hydrophobic anchor subunit [Marinobacter
algicola DG893]
Length = 114
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR TA + +F F + D Y+ ++ L +SI
Sbjct: 10 RSGVFDWMIQRVTAYVLALYTVFLFGFVLT-TDINYDSWSALFDQTWFRIFTLLALLSIG 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ + DYI L + + + + + +++ +
Sbjct: 69 AHAWVGLWTVTTDYIKATLPRFLVQALCGLAMFVYLVWGI 108
>gi|239993979|ref|ZP_04714503.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonas macleodii ATCC 27126]
Length = 115
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 45/101 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TA + +F FFI + + + + S +A+ +++
Sbjct: 10 RDGVQDYVSLRATAAIIFAYSVFMAWFFITTDNLTFIEWRGLFSGLAMKVFTLAALVAVM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G+ ++ DY+ L+ ++ + + LF
Sbjct: 70 IHVRIGLWQVLTDYVKSAGLRAGLQYILNIIAFGYVAVGLF 110
>gi|254786525|ref|YP_003073954.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Teredinibacter turnerae T7901]
gi|237684865|gb|ACR12129.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Teredinibacter turnerae T7901]
Length = 123
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 43/100 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QRF+A+ + + + F I + Y + S + + L +S
Sbjct: 10 RSGLSDWLIQRFSALVLATYTLVVLGFLILHPQLTYAEWSGFYSQLWMRVFSLLVLVSTV 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ ++ DY+ R++ L + +L+ + +
Sbjct: 70 AHGWIGLWGVLTDYVTSRMIGSSALMLRMIALLIYALISV 109
>gi|330973470|gb|EGH73536.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 122
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR +A+ + IF I + + + Y Q + ++ + L +++
Sbjct: 9 SRSGLYDWMAQRVSAVVLAAYFIFLIGYMVFHPSRSYAQWHGLFAHNGMRIFSLLALVAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
H +GM I DY+ L + +F+
Sbjct: 69 GAHAWVGMWTIATDYLTPMALGKSA-TAVRFLFQAVCGVLMFA 110
>gi|332535003|ref|ZP_08410819.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035570|gb|EGI72063.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Pseudoalteromonas haloplanktis ANT/505]
Length = 115
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + +E + SN+A+ + I I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLITLICIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH ++G+ ++ DY+ L+ + F+ + + + L
Sbjct: 70 VHTRIGLWQVLTDYVKCSKLRAVLGFVLNLMAVAYVAIGLI 110
>gi|291614299|ref|YP_003524456.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sideroxydans lithotrophicus ES-1]
gi|291584411|gb|ADE12069.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Sideroxydans lithotrophicus ES-1]
Length = 115
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 44/101 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA + + + + + Y+ + + S + + L +S+
Sbjct: 9 AHYGLRDWLAQRVTAAVMAVYSLVVVVYLLMQPSLGYDTWIDLFSGNIMRTFSMLFLLSL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G++ I+ DY+ +++ + ++L I+ L
Sbjct: 69 FYHAWIGVRDIVMDYVKPAGIRLSIHVLVILALVLYTIWSL 109
>gi|296138695|ref|YP_003645938.1| succinate dehydrogenase cytochrome b subunit [Tsukamurella
paurometabola DSM 20162]
gi|296026829|gb|ADG77599.1| succinate dehydrogenase cytochrome b subunit [Tsukamurella
paurometabola DSM 20162]
Length = 155
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPY-----EQIVSVLSNVAVASIMGLGTISISV 79
++ RF+ IA + + + + + ++ +
Sbjct: 42 WLFMRFSGIALLVLVFGHVFIMLALDSDGVHRINAAFVAQRWASPFWQIWDITMLWLAQL 101
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
H G++VII+DY + + ++L++ ++LL
Sbjct: 102 HGGNGLRVIIDDYAKKDRTRFWLKALLVLSMILVVGLGSYALL 144
>gi|71279703|ref|YP_268941.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Colwellia psychrerythraea 34H]
gi|71145443|gb|AAZ25916.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Colwellia psychrerythraea 34H]
Length = 115
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+ ++G FI R +AI + + + FF+ Y+ + ++V + ++
Sbjct: 8 AGRNGVHDFILLRASAIILVLYTLLLAGFFVVTPSVTYDVWQGFFACMSVKVATVMALLA 67
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLF 104
+ VH ++G+ ++ DY+ L+ F
Sbjct: 68 LLVHAKIGVWQVLSDYVKPAFLRGALQF 95
>gi|261856936|ref|YP_003264219.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Halothiobacillus neapolitanus c2]
gi|261837405|gb|ACX97172.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Halothiobacillus neapolitanus c2]
Length = 116
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 47/101 (46%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A+ G ++ QR TA+ + + +F + + + + + + ++ V + +S+
Sbjct: 9 ARYGIKDWLVQRLTAVVMVIYTLFITGYLLWHPVSNFADWQMMFHSLPVRLFSLIFLLSL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
VH LGM+ I DYIH L+++ + ++ + +
Sbjct: 69 FVHAWLGMRDIFMDYIHPTLIRLGLHALVILALVAYTAWAV 109
>gi|226941337|ref|YP_002796411.1| SdhD [Laribacter hongkongensis HLHK9]
gi|226716264|gb|ACO75402.1| SdhD [Laribacter hongkongensis HLHK9]
Length = 116
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA + + + + + + YE ++ S V I + I++
Sbjct: 10 AGYGVKDWIVQRMTAAVMLVYTVLIVLMLLAMP-SSYEGWQALFSLTWVQVITQITFIAV 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMF--LFMNSCFVLLLIIFCLF 119
H+ +G++ + DYI L++ L L+ F +
Sbjct: 69 VWHLWVGIRDLWMDYIKPDGLRLALHALTAVWLVGCLVYSFVVV 112
>gi|3273344|dbj|BAA31214.1| fumarate reductase cytochrome b small subunit [Rhodoferax
fermentans]
Length = 121
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA+ F + +A I YE + + + ++ + +S
Sbjct: 14 AHYGVRDWLSQRVTAVILALFTVLLLAQVIFSKGPISYELWAGIFAAQWMKTLTFVVFLS 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMF 102
+ H+ +GM+ I DY+ ++ +
Sbjct: 74 LFYHVWVGMRNIFMDYVKPYAVRFVL 99
>gi|294340932|emb|CAZ89327.1| putative Succinate dehydrogenase hydrophobic membrane anchor
protein (sdhD) [Thiomonas sp. 3As]
Length = 121
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 45/101 (44%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR TA F + + +F+ G +E+ + + + + + +++
Sbjct: 15 AHYGLRDWMAQRVTAAVIAVFTLVLLVYFLAPGPLSFERWHDLFAQQWMKLLTFVTVLAL 74
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H+ +GM+ I DY+ ++++ ++L + L
Sbjct: 75 IYHVWVGMRDIWMDYVKPVGVRLLLQIGTILWLLACAGWAL 115
>gi|192360343|ref|YP_001981988.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Cellvibrio japonicus Ueda107]
gi|190686508|gb|ACE84186.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Cellvibrio japonicus Ueda107]
Length = 123
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR + + IF +A+ + + YEQ S+ S + + +S
Sbjct: 10 RSGLYDWLIQRVGGVIMAAYTIFIVAYLVLNPELTYEQWQSLYSQLWMRVFSLAVLLSFI 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H +G+ ++ DY+ RLL F+ ++L +
Sbjct: 70 SHAWIGLWAVLTDYLTVRLLGSKATFLRIFAQIVLGAVAV 109
>gi|268590351|ref|ZP_06124572.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Providencia rettgeri DSM 1131]
gi|291314261|gb|EFE54714.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Providencia rettgeri DSM 1131]
Length = 114
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI ++++ + F D Y+ ++ L SI
Sbjct: 10 RTGIQDWLLIRGSAIVIALYVLYIVGFVA-INDITYDVWRGFFASSVTKVFTILTLFSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
VH +GM ++ DY+ ++++
Sbjct: 69 VHAWIGMWQVLTDYVKPLAIRLVLQLA 95
>gi|329897268|ref|ZP_08272006.1| Succinate dehydrogenase hydrophobic membrane anchor protein [gamma
proteobacterium IMCC3088]
gi|328921264|gb|EGG28660.1| Succinate dehydrogenase hydrophobic membrane anchor protein [gamma
proteobacterium IMCC3088]
Length = 119
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G F+ QR T++ + + + + Y Q ++ + + +S+
Sbjct: 10 RNGLSDFLVQRITSVILLAYFAWLAYVLV--AGTDYAQWEALFAATWMRIFSVAALLSLV 67
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIF 116
H +GM ++ DY+ RL+ + L +
Sbjct: 68 FHAWIGMWGVLSDYVTERLMGPKGNVLRFLLQLAIGAA 105
>gi|59711427|ref|YP_204203.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Vibrio fischeri ES114]
gi|197335345|ref|YP_002155582.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio fischeri MJ11]
gi|59479528|gb|AAW85315.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556
[Vibrio fischeri ES114]
gi|197316835|gb|ACH66282.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Vibrio fischeri MJ11]
Length = 115
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R +AI + ++ + F + Y + + + L +SI
Sbjct: 10 RNGVHDFILIRASAIILTLYTLYIVGFCAFGPELTYLSWTNFFGGLFTKAFTMLALLSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMF------LFMNSCFVLLLIIFCL 118
+H +G+ ++ DYI +L+ + + F L+I++ +
Sbjct: 70 IHAWIGLWQVLTDYIKPVMLRALLQLGLVSVLFVYFFSGLIIVWGV 115
>gi|257453554|ref|ZP_05618844.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enhydrobacter aerosaccus SK60]
gi|257449012|gb|EEV23965.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Enhydrobacter aerosaccus SK60]
Length = 123
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ ++ QR +A+ + + + +F+ + +E + ++ + L +
Sbjct: 18 GLTGSGSRDWVVQRISAVVLAVYSLVMLGWFLTHQ-PTFELWQGFMLSLPMRLFTLLMIL 76
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC--FVLLLIIFCLF 119
++ H +GM ++ DY+ L+ + V L +F
Sbjct: 77 ALVGHAWVGMWTVLTDYVKSNGLRFVLQSAMILAVLVYLFWGVMIF 122
>gi|327398308|ref|YP_004339177.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hippea maritima DSM 10411]
gi|327180937|gb|AEA33118.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Hippea maritima DSM 10411]
Length = 123
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFII--FFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
R GS K G ++ QR + +A + ++ FFI F+ Y+ + + L++
Sbjct: 10 RYQGSGKGGDLSWLLQRVSGVALLVLLLGHFFIEHFVGGP-LDYQHVAARLASPLWKVFD 68
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ H G+ + IEDY+H +F F ++ II+ + + + I
Sbjct: 69 LTFVVFALYHGINGIFMNIEDYVHSGWR----VFWKGFFWVVGIIYLVLAAITI 118
>gi|313668608|ref|YP_004048892.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria lactamica ST-640]
gi|313006070|emb|CBN87531.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Neisseria lactamica 020-06]
Length = 108
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G + QR TA+ + + + + Y + S V + +++
Sbjct: 4 AHYGLRDWAMQRATAVIMLIYTVALLVVLFTLP-KEYSAWQAFFSQTWVKVFTQVSFLAV 62
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
+H +G++ + DYI +++
Sbjct: 63 FLHAWVGIRDLWMDYIKPFGVRLFLQVAT 91
>gi|300113364|ref|YP_003759939.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Nitrosococcus watsonii C-113]
gi|299539301|gb|ADJ27618.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus watsonii C-113]
Length = 109
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 52/104 (50%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QR TA+ + ++ F+A ++ YE + +++ V+ ++ L ++ +
Sbjct: 6 SGLRAWLAQRGTAVTMLVLLLLFLARLMQDSFPTYEAWRAWINDPLVSIMVALFFGALLL 65
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
H +G++ II DY+ L+++ F+ + + + LL+
Sbjct: 66 HSWIGLRNIILDYVDPTPLRLLAHFLVVVVYSAIGFWVIRILLR 109
>gi|56479263|ref|YP_160852.1| succinate dehydrogenase (membrane anchor subunit) [Aromatoleum
aromaticum EbN1]
gi|56315306|emb|CAI09951.1| Succinate dehydrogenase (membrane anchor subunit) [Aromatoleum
aromaticum EbN1]
Length = 115
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 42/97 (43%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + F I F ++ + +E + + + L +++
Sbjct: 9 AHYGLRDWIGQRATAVFMVIFTILFAIAALRLPEMTHEAWSGLFRSGVMRFFTFLFFLAL 68
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
H +G++ I DYI+ ++++ + ++
Sbjct: 69 FYHAWIGVRDIFMDYINPVGVRLVLHVVTIFVLVGYA 105
>gi|71064680|ref|YP_263407.1| succinate dehydrogenase subunit D [Psychrobacter arcticus 273-4]
gi|71037665|gb|AAZ17973.1| succinate dehydrogenase subunit D [Psychrobacter arcticus 273-4]
Length = 134
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
G+ +I QR +A+ + + + FF+ +GD Y + + ++++ + + ++++
Sbjct: 15 GSGSRDWIVQRISAVVLAVYSVVLLGFFLTHGDVTYTEWSNFMTSLPMRLFSLVAVLALA 74
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMF----LFMNSCFVLLLIIF 116
H +GM + DYI L L + + ++ +++F
Sbjct: 75 GHAWIGMWTVFTDYITTGKLGASAAGLRLVLQTLMIIAVLVF 116
>gi|213018856|ref|ZP_03334664.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
gi|212995807|gb|EEB56447.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
Length = 101
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 35 NIPFIIFFIAFFIK--YGDAPY---EQIVSVLSNVAVASIMGLGTISISVHMQLGMQVII 89
+ +FI F Y D+P E++ +++ + I H LGMQV+
Sbjct: 1 MLFLFPWFIYSFSCTFYVDSPLSFNEKLFQAINHPLELLFFVILVFCIFWHAVLGMQVVC 60
Query: 90 EDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
EDYI LL+I + + I F
Sbjct: 61 EDYIDSVLLRIFTITCIKYLSSITYIVLAF 90
>gi|238898941|ref|YP_002924623.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466701|gb|ACQ68475.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556
with SdhC [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 115
Score = 48.1 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++ + FF + YE + L SI
Sbjct: 10 RNGIQDWLLLRASAIIIALYVFYLFGFFAITPNVTYEIWQHFFAAAFTKIFTLLTLFSIL 69
Query: 79 VHMQLGMQVIIEDYI 93
+H +G+ + DY+
Sbjct: 70 IHAWIGLWQVFTDYV 84
>gi|261401136|ref|ZP_05987261.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria lactamica ATCC 23970]
gi|269208914|gb|EEZ75369.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria lactamica ATCC 23970]
Length = 113
Score = 48.1 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + G + QR TA+ + + + + Y + S V +
Sbjct: 4 RKLTGVHYGLRDWAMQRATAVIMLIYTVALLVVLFTLP-KEYSAWQAFFSQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMN 106
+++ +H +G++ + DYI +++
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGVRLFLQVAT 96
>gi|119472930|ref|ZP_01614803.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonadales bacterium TW-7]
gi|119444648|gb|EAW25957.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonadales bacterium TW-7]
Length = 115
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG ++ R TA+ + IF I +F+ + +E + SN+A+ + + I
Sbjct: 10 RDGVQDYVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLVTLVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH ++G+ ++ DY+ L+ F+ + + + L
Sbjct: 70 VHTRIGLWQVLTDYVKNSKLRAFLGFVLNLMAVAYVAIGLI 110
>gi|119774561|ref|YP_927301.1| succinate dehydrogenase, cytochrome subunit B [Shewanella
amazonensis SB2B]
gi|119767061|gb|ABL99631.1| succinate dehydrogenase subunit D [Shewanella amazonensis SB2B]
Length = 115
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +A+ + IF ++F +E + S + + L I++
Sbjct: 10 RSGVHDFILLRASAVILACYTIFLVSFIALSAPLTFEIWHGLFSTLPMKVFTLLALIALL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFL--FMNSCFVLLLIIFCLF 119
+H +G+ ++ DY+ L+ + F+ + F L +
Sbjct: 70 IHAWIGIWQVLTDYVKQTALRGVLQFTFVVTAFAYLAAGIVIV 112
>gi|222111458|ref|YP_002553722.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax ebreus TPSY]
gi|221730902|gb|ACM33722.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acidovorax ebreus TPSY]
Length = 121
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA+ F + +A I Y+ + S+ + + ++
Sbjct: 14 AHYGVRDWLVQRATAVLMALFTLVLLACVIFSKGPIGYDLWAGIFSSQWMKVLTLSVIVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLF 104
++ H +G++ + DYI L++
Sbjct: 74 LAWHAWVGVRNVWMDYIKPAGLRLTLQV 101
>gi|319943669|ref|ZP_08017950.1| succinate dehydrogenase cytochrome b small subunit [Lautropia
mirabilis ATCC 51599]
gi|319742902|gb|EFV95308.1| succinate dehydrogenase cytochrome b small subunit [Lautropia
mirabilis ATCC 51599]
Length = 116
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 36/102 (35%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G ++ QR T + + IF + Y + + + +++
Sbjct: 10 AHYGLRDWLAQRITGLIMALYTIFLLCSVCTLPQLDYISWSQLFQGQFMKVATMVAVLAL 69
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
H +G++ + DY+ L++++ + + F
Sbjct: 70 IYHAWVGIRDLYMDYLKNTLVRLVLEVGTLVLLTGYAFWAAF 111
>gi|121605924|ref|YP_983253.1| succinate dehydrogenase, cytochrome b subunit [Polaromonas
naphthalenivorans CJ2]
gi|120594893|gb|ABM38332.1| succinate dehydrogenase subunit D [Polaromonas naphthalenivorans
CJ2]
Length = 121
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A GT ++ QR TA F + + + Y+Q + S + + ++
Sbjct: 14 AHYGTRDWLSQRITAALMAIFTLLLLGQVLLSKGPIGYDQWAGIFSAQWMKILTFAVIVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H+ +GM+ I DYI L+++ +++ + +
Sbjct: 74 LLWHVWVGMRDIWMDYIKPVGLRLLLQVFTIVWLVACAGWGI 115
>gi|149926164|ref|ZP_01914426.1| putative transmembrane succinate dehydrogenase (hydrophobic
membrane anchor subunit) oxidoreductase protein
[Limnobacter sp. MED105]
gi|149824982|gb|EDM84194.1| putative transmembrane succinate dehydrogenase (hydrophobic
membrane anchor subunit) oxidoreductase protein
[Limnobacter sp. MED105]
Length = 125
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSV-----LSNVAVASIMGL 72
A G ++ QR TA+ + I + D Y + V LS + L
Sbjct: 14 AHYGLKEWVAQRITAVIMSVYTIGLFLAVLFTPDLDYAKWVGFFNFTVLSFPLGKILALL 73
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+S+ H +G++ I DY+ +++ + ++L +
Sbjct: 74 AILSLCYHAYIGIRDIWMDYVKPTGIRLGLQVFTALWLLGAAGYAA 119
>gi|319949457|ref|ZP_08023517.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Dietzia cinnamea P4]
gi|319436883|gb|EFV91943.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Dietzia cinnamea P4]
Length = 143
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 4/105 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
+I R++ +A + + + + + + + + A L +H
Sbjct: 36 WIFMRYSGVALVILTLGHLTVGLMIDEGVHRIDWAYVADRWQSPFWAIWDILMLWLAMLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
G++ II DY + + +L ++ +++ +A
Sbjct: 96 GANGVRTIIADYSRKDSTRFWLNSILLVATVLTLVLGTYAIFGLA 140
>gi|332977197|gb|EGK13994.1| succinate dehydrogenase cytochrome b small subunit [Psychrobacter
sp. 1501(2011)]
Length = 128
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 5 MRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV 64
MR+ G G G+ ++ QR +A+ + + ++FF+ G YEQ V + ++
Sbjct: 6 MRNDSGIKSATGLTGSGSRDWVMQRISAVVLAVYAVVIVSFFLFNGHIGYEQWVMFIMSM 65
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMN--SCFVLLLIIFCLF 119
+ + L ++++VH +GM + DY+ L+I+ + V L +F
Sbjct: 66 PMRLLSLLAIVALAVHAWVGMWTVFTDYVKSTGLRIVLQAAMIIAILVYLFWGVMIF 122
>gi|209694422|ref|YP_002262350.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Aliivibrio salmonicida LFI1238]
gi|208008373|emb|CAQ78528.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Aliivibrio salmonicida LFI1238]
Length = 115
Score = 47.7 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G FI R +AI + ++ + F + + Y + + L +SI
Sbjct: 10 RSGVHDFILIRASAIILTLYTLYIVGFCVFGPELTYMSWTNFFGGLFTKVFTMLALLSII 69
Query: 79 VHMQLGMQVIIEDYIH------YRLLKIMFLFMNSCFVLLLIIFCL 118
+H +G+ ++ DYI L ++ + + F L+I++ +
Sbjct: 70 IHAWIGLWQVLTDYIKPVLLRALLQLGLVAVLLGYFFSGLIIVWGV 115
>gi|54293524|ref|YP_125939.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Lens]
gi|53753356|emb|CAH14806.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Lens]
Length = 115
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 43/94 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ ++IF F + D + Q + +N +G I+++
Sbjct: 10 GNGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLNFSQWHLLFANKVFQIATTIGLIALT 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL 112
+H +G+ + DY+ ++++ + ++
Sbjct: 70 LHAWIGIWTVTTDYMKCTVIRLSVQLLVVLWLFG 103
>gi|253990451|ref|YP_003041807.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|211638982|emb|CAR67597.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781901|emb|CAQ85065.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Photorhabdus asymbiotica]
Length = 115
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +AI + ++I+ + F D YE S+ L SI
Sbjct: 10 RTGIHDWLLLRASAIIIVLYVIYILGFVAITSDITYEVWRGFFSSSITKVFTVLALFSIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFM 105
H +GM ++ DY+ L+++
Sbjct: 70 AHAWIGMWQVLTDYVKPLALRLVLQLA 96
>gi|77360591|ref|YP_340166.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with
sdhC [Pseudoalteromonas haloplanktis TAC125]
gi|76875502|emb|CAI86723.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Pseudoalteromonas haloplanktis TAC125]
Length = 115
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+DG F+ R TA+ + IF I +F+ + +E + SN+A+ + + I
Sbjct: 10 RDGVQDFVSLRTTALIISAYAIFIIGYFLATPEVTFEAWTGLFSNLAMKGFTLIALVCIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
VH ++G+ ++ DY+ L+ + F+ + + L
Sbjct: 70 VHTRIGLWQVLTDYVKCAKLRAVLGFVLNLMAFAYVAIGLI 110
>gi|332992985|gb|AEF03040.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome
b556 with sdhC [Alteromonas sp. SN2]
Length = 115
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 45/101 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R TA + +F FFI + + + S +A+ I+I
Sbjct: 10 RNGIQDYVSLRTTAAIIFAYTVFMAWFFISTDNITFIAWRGLFSGLAMKVFTLAALIAIM 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+H+++G+ ++ DY+ L+ + ++ + + LF
Sbjct: 70 IHVRIGLWQVLTDYVKASGLRAIIQYVLNIIAFGYVAVGLF 110
>gi|323357073|ref|YP_004223469.1| succinate dehydrogenase, hydrophobic anchor subunit [Microbacterium
testaceum StLB037]
gi|323273444|dbj|BAJ73589.1| succinate dehydrogenase, hydrophobic anchor subunit [Microbacterium
testaceum StLB037]
Length = 152
Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVL 61
R+ R +G K G +I R + + + I + + GD + + L
Sbjct: 14 RTPSVRKKGSNLEKWG---WIYMRASGVLLLVLIFGHLFVNLMLGDGIHQIDFAFVAGKL 70
Query: 62 SNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++ L +H GM+ I+ DY+ ++ + ++ LLI+ +
Sbjct: 71 ASPFWQWWDVLMLWLALIHGANGMRTIVNDYVTNAAVRKVLVWSLWLSAGLLILLGTLVV 130
Query: 122 L 122
Sbjct: 131 F 131
>gi|121611267|ref|YP_999074.1| succinate dehydrogenase, cytochrome b subunit [Verminephrobacter
eiseniae EF01-2]
gi|121555907|gb|ABM60056.1| succinate dehydrogenase subunit D [Verminephrobacter eiseniae
EF01-2]
Length = 122
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA F + +A I Y Q + + + S+ ++
Sbjct: 15 AHYGLRDWLCQRVTAALMALFTLVLLARLIFSKGPIGYHQWAGIFHSQWMKSLTFAIIVA 74
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
++ H +G++ I+ DYIH L+++ V L+
Sbjct: 75 LAWHAWVGVRDILMDYIHPVGLRLVLQVG--ALVWLVGCAG 113
>gi|294637439|ref|ZP_06715729.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Edwardsiella tarda ATCC 23685]
gi|291089380|gb|EFE21941.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Edwardsiella tarda ATCC 23685]
Length = 115
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++I+ +AF + G Y + S+ L + +
Sbjct: 10 RNGIQDWLLLRASAIIMTLYVIYLVAFIVGAGPLNYGVWLDFFSSRLTQVFTLLTLLCVL 69
Query: 79 VHMQLGMQVIIEDYI 93
VH +GM ++ DY+
Sbjct: 70 VHAWIGMWQVLTDYV 84
>gi|193214176|ref|YP_001995375.1| succinate dehydrogenase membrane subunit [Chloroherpeton thalassium
ATCC 35110]
gi|193087653|gb|ACF12928.1| succinate dehydrogenase, membrane subunit, putative [Chloroherpeton
thalassium ATCC 35110]
Length = 172
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL 112
YE++ + LSN L I H G+ II+DY+ + L++ + F +
Sbjct: 82 TYEKVTTRLSNPIWKIFDLLFLIFGLYHGMNGLLNIIDDYVRHTGLRLTLV----SFCWV 137
Query: 113 LIIFCLF 119
L L
Sbjct: 138 LAALLLV 144
>gi|169630753|ref|YP_001704402.1| succinate dehydrogenase, hydrophobic membrane anchor protein SdhD
[Mycobacterium abscessus ATCC 19977]
gi|169242720|emb|CAM63748.1| Probable succinate dehydrogenase, hydrophobic membrane anchor
protein SdhD [Mycobacterium abscessus]
Length = 160
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
+I R + + I + + + + + + + ++ + L +H
Sbjct: 52 WIFMRLSGVVLIFLALGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLMLWLAQLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ II DY + + + ++ ++ + LL
Sbjct: 112 GGNGMRTIIADYTRKDSTRFWLNCLLALSIIFTVVLGTYVLL 153
>gi|330503171|ref|YP_004380040.1| succinate dehydrogenase subunit D [Pseudomonas mendocina NK-01]
gi|328917457|gb|AEB58288.1| succinate dehydrogenase subunit D [Pseudomonas mendocina NK-01]
Length = 106
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
+ QR +A+ + +F + + I Y + + S+ A+ L +++SVH +GM
Sbjct: 1 MAQRVSAVVLAAYTLFLLGYVICNPGMGYAEWHGLFSHTAMRIFSLLALVALSVHAWVGM 60
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
I DY+ L + +F++
Sbjct: 61 WTISTDYLTPMALGKWA-TGVRFLFQAVCGIAMFAMF 96
>gi|206889944|ref|YP_002248615.1| succinate dehydrogenase membrane subunit, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741882|gb|ACI20939.1| succinate dehydrogenase membrane subunit, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 104
Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 25 FIKQRFTAIANI--PFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R T + + F + F+ + + Y ++ LS + + S H
Sbjct: 4 WLLHRITGVILVVGLLYHFILMHFMGHDNYSYNAVMQRLSEPSWKIFNIVFLFSALYHGF 63
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
G+ ++ +Y+ LK + FM + L +
Sbjct: 64 YGLNGVVTEYVRNNSLKRILKFMAFTVPIGLAFYG 98
>gi|237653214|ref|YP_002889528.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thauera sp. MZ1T]
gi|237624461|gb|ACR01151.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thauera sp. MZ1T]
Length = 116
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + I F + Y++ + S+ + L +S+
Sbjct: 10 AHYGLKDWIAQRATAVYMAAYTIIFALCAFSLRELNYQEWSGLFSHGLFKFLSFLFFLSV 69
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLI 114
H +G++ + DYI +++ + ++
Sbjct: 70 FYHAWIGIRDLWMDYIKPNGVRLALHLVTIFVLVGYA 106
>gi|319760460|ref|YP_004124398.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Blochmannia vafer str. BVAF]
gi|318039174|gb|ADV33724.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Candidatus Blochmannia vafer str. BVAF]
Length = 117
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 45/103 (43%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
K G ++ RF+A+ I +I++ + F + YEQ S + + + +
Sbjct: 12 KHGVYEWLIVRFSAMLMILYILYILNFMCFNHNVSYEQWRSFFYSNKIRLFSIIILFFVL 71
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +G++ ++EDYI K + + + + ++ + +
Sbjct: 72 QHTWIGIRHVLEDYIKSVQFKRLGMKLIGIVIYTYLLSGIVII 114
>gi|257069274|ref|YP_003155529.1| succinate dehydrogenase subunit D [Brachybacterium faecium DSM
4810]
gi|256560092|gb|ACU85939.1| succinate dehydrogenase subunit D [Brachybacterium faecium DSM
4810]
Length = 150
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYG----DAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + + + + G + + ++ L +H
Sbjct: 29 WMFMRASGVLLVILVFGHLFVNLWLGQGVKGIDFAFVGGKWASPFWQVWDLLMLWLGLIH 88
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY L+++ + V++ II +
Sbjct: 89 GGNGVRTIINDYARGDRLRLVLKGLLYFAVVVTIILGTLVIF 130
>gi|197284463|ref|YP_002150335.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Proteus mirabilis HI4320]
gi|194681950|emb|CAR41361.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Proteus mirabilis HI4320]
Length = 114
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R TAI ++++F+ F D YE S+ L +SI
Sbjct: 10 RTGIQDWLFLRATAIIIFLYVLYFVGFVAT-TDITYEVWRGFFSSSLTKVFTLLTLLSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
+H +GM ++ DYI L++
Sbjct: 69 IHAWIGMWQVLTDYIKPIALRLTLQL 94
>gi|320008970|gb|ADW03820.1| succinate dehydrogenase cytochrome b subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 159
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I + +I + + + + ++ +H
Sbjct: 51 WLFMRLSGIVLVVLVIGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLAMLWLAMLH 110
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +I DY + + + F +LL +F
Sbjct: 111 GANGLRTVINDYAERDNTRFWLKMLLYTATVFTVLLGTLVIF 152
>gi|227356641|ref|ZP_03841027.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Proteus mirabilis ATCC 29906]
gi|227163149|gb|EEI48080.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Proteus mirabilis ATCC 29906]
Length = 114
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R TAI ++++F+ F D YE S+ L +SI
Sbjct: 10 RTGIQDWLFLRATAIIIFLYVLYFVGFVAT-TDITYEVWRGFFSSSLTKVFTLLTLLSIL 68
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLF 104
+H +GM ++ DYI L++
Sbjct: 69 IHAWIGMWQVLTDYIKPIALRLTLQL 94
>gi|91789452|ref|YP_550404.1| succinate dehydrogenase subunit D [Polaromonas sp. JS666]
gi|91698677|gb|ABE45506.1| succinate dehydrogenase subunit D [Polaromonas sp. JS666]
Length = 121
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA F + +A + Y++ + S+ + + I+
Sbjct: 14 AHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSSQWMKVLTFTIIIA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ H+ +GM+ I DYI L++ +++ + +
Sbjct: 74 LLWHVWVGMRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGI 115
>gi|332528253|ref|ZP_08404258.1| succinate dehydrogenase subunit D [Hylemonella gracilis ATCC 19624]
gi|332042273|gb|EGI78594.1| succinate dehydrogenase subunit D [Hylemonella gracilis ATCC 19624]
Length = 121
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTIS 76
A G +I QR TA+ F + +A + YE ++ + + + I+
Sbjct: 14 AHYGVRDWIVQRATAVIMALFTLLLLARVLLSSGPLGYESWAAIFAPQWMKVVTFAVVIA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H+ +GM+ I DYI L++ V L
Sbjct: 74 LVWHVWVGMRDIWMDYIKPVWLRLSLQVFT--IVWLAGCAG 112
>gi|118473638|ref|YP_886047.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium smegmatis str. MC2 155]
gi|118174925|gb|ABK75821.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium smegmatis str. MC2 155]
Length = 156
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ IA + + + + + D + + ++ +H
Sbjct: 48 WLFMRFSGIALVFLALGHLFIMLMWQDGVYRIDFNYVAERWASPFWQIWDMALLWLAMIH 107
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
GM+ II DY + K L + + F L+L + L
Sbjct: 108 GANGMRTIIGDYARKNVTKFWLNSLLLLATGFTLVLGSYVLV 149
>gi|121595115|ref|YP_987011.1| succinate dehydrogenase subunit D [Acidovorax sp. JS42]
gi|120607195|gb|ABM42935.1| succinate dehydrogenase subunit D [Acidovorax sp. JS42]
Length = 121
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA F I +A I Y++ + S + + ++
Sbjct: 14 AHYGIRDWLAQRVTAALMALFTIALLAQVIFSKGPIGYDRWAGIFSTQWMKVLTFSVIVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H+ +G++ + DY+ L+++ V L+
Sbjct: 74 LVWHVWVGVRDVWMDYVKSAGLRLLLQVFT--IVWLVACAG 112
>gi|50085919|ref|YP_047429.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter sp.
ADP1]
gi|49531895|emb|CAG69607.1| succinate dehydrogenase, hydrophobic subunit [Acinetobacter sp.
ADP1]
Length = 121
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + +G YEQ + + + + L +
Sbjct: 6 GLTGSGSRDWFIQRISAVVLAVYTVVIFGWILFHGGFSYEQWSGFMMTLPMKILSLLAIL 65
Query: 76 SISVHMQLGMQVIIEDYI-------HYRLLKIMFLFMNSCFVLLLIIFCL 118
S++ H +GM + DY+ L+++ V + I+ +
Sbjct: 66 SLAAHAWIGMWQVFTDYVTTRQMGPSASGLRLVLTSAVIIAVFVFAIWGI 115
>gi|262201720|ref|YP_003272928.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Gordonia bronchialis DSM 43247]
gi|262085067|gb|ACY21035.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Gordonia bronchialis DSM 43247]
Length = 153
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA-----PYEQIVSVLSNVAVASIMGLGTISISV 79
++ RF+ +A I I + + + ++ S+ +
Sbjct: 43 WMFMRFSGLALIILTIGHMFIMLAWDSQGVHRIDAAFVLERWSSPFWQIWDLSMLWLAQL 102
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
H G++ +I DY + + ++L+++ +++L I
Sbjct: 103 HGGNGVRTVIADYSRKDSTRFWLNVLLGVSMILILVLGTYAILTI 147
>gi|302536397|ref|ZP_07288739.1| succinate dehydrogenase membrane subunit [Streptomyces sp. C]
gi|302445292|gb|EFL17108.1| succinate dehydrogenase membrane subunit [Streptomyces sp. C]
Length = 160
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I + +I + + + + ++ L +H
Sbjct: 52 WLFMRLSGIVLVVLVIGHLVIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 112 GSNGLRTVINDYAERANTRLWLKGLLYTATVFTILLGTLVIF 153
>gi|282860944|ref|ZP_06270010.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Streptomyces sp. ACTE]
gi|282564680|gb|EFB70216.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Streptomyces sp. ACTE]
Length = 160
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I + +I + + + + ++ +H
Sbjct: 52 WLFMRLSGIVLVVLVIGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLAMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +I DY + + + F +LL +F
Sbjct: 112 GANGLRTVINDYAERDNTRFWLKMLLYTATVFTVLLGTLVIF 153
>gi|261377704|ref|ZP_05982277.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria cinerea ATCC 14685]
gi|269145977|gb|EEZ72395.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria cinerea ATCC 14685]
Length = 113
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + + V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLIYTVVLLVVLFTLP-KEYSAWQAFFNQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|238752113|ref|ZP_04613596.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia rohdei ATCC 43380]
gi|238709690|gb|EEQ01925.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia rohdei ATCC 43380]
Length = 115
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 34/75 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++++ + F + D YE ++ L ++I
Sbjct: 10 RNGVHDWLLLRASAIVITLYVLYILGFVVIVPDITYEIWRGFFASHITKVFTLLTLLAIL 69
Query: 79 VHMQLGMQVIIEDYI 93
H +G+ ++ DYI
Sbjct: 70 AHAWIGLWQVLTDYI 84
>gi|283458662|ref|YP_003363297.1| succinate dehydrogenase, hydrophobic anchor subunit [Rothia
mucilaginosa DY-18]
gi|283134712|dbj|BAI65477.1| succinate dehydrogenase, hydrophobic anchor subunit [Rothia
mucilaginosa DY-18]
Length = 161
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + +N L +H
Sbjct: 39 WLGMRLSGVVLVVLIFGHLFSNLMVGDGIHAIDFGFVGGKWANPFWQVWDLLLLWLAMLH 98
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLFS 120
G++VII+DY L+I LF FVLL+ +F+
Sbjct: 99 GANGIRVIIDDYAEKDRLRIWLKVILFAACAFVLLVGTLTIFA 141
>gi|107101015|ref|ZP_01364933.1| hypothetical protein PaerPA_01002045 [Pseudomonas aeruginosa PACS2]
Length = 106
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
+ QR +A+ ++IF + + I + + Y + S + L +++SVH +GM
Sbjct: 1 MAQRVSAVVLAAYVIFLLGYLIAHPNISYADWHGLFSQGWMRIFSLLTLVALSVHAWVGM 60
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFS 120
I DY+ L + + +F+
Sbjct: 61 WTISTDYLTSMALGKAA-TVVRFLFQAVCGMAMFA 94
>gi|238920752|ref|YP_002934267.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
[Edwardsiella ictaluri 93-146]
gi|238870321|gb|ACR70032.1| succinate dehydrogenase, hydrophobic membrane anchor protein,
putative [Edwardsiella ictaluri 93-146]
Length = 115
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 46/103 (44%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++I+ +AF + G Y + S+ L + I
Sbjct: 10 RNGIQDWLLLRASAIVITLYVIYLLAFVVGAGPLNYTLWLDFFSSRITQVFTLLTLLCIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+H +GM ++ DY+ L+++ +++ +I+ +
Sbjct: 70 IHAWIGMWQVLTDYVKPLALRLVLQLAIVVVLVVYLIYGTLVV 112
>gi|269139932|ref|YP_003296633.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Edwardsiella tarda EIB202]
gi|267985593|gb|ACY85422.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Edwardsiella tarda EIB202]
gi|304559767|gb|ADM42431.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Edwardsiella tarda FL6-60]
Length = 115
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ R +AI ++I+ +AF + G Y + S+ L + I
Sbjct: 10 RNGIQDWLLLRASAIIITLYVIYLLAFVVGAGPLTYTLWLDFFSSRITQVFTLLTLLCIL 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H +GM ++ DY+ L+
Sbjct: 70 IHAWIGMWQVLTDYVKPLALR 90
>gi|126666299|ref|ZP_01737278.1| hypothetical protein MELB17_11961 [Marinobacter sp. ELB17]
gi|126629100|gb|EAZ99718.1| hypothetical protein MELB17_11961 [Marinobacter sp. ELB17]
Length = 59
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 30 FTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQL 83
TA +P +I+ +A I E +V L+ VA M L I++ HM L
Sbjct: 1 MTAAILVPLVIWSLASLIAIVGGGRETVVGWLARPGVAIPMILLLIALFWHMAL 54
>gi|239814436|ref|YP_002943346.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Variovorax paradoxus S110]
gi|239801013|gb|ACS18080.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Variovorax paradoxus S110]
Length = 121
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR T F I +A I Y+ + + + + S
Sbjct: 14 AHYGLRDWLSQRITGGLMALFTIILLAQLIFTRGPIGYDLWAGIFAAQWMKVLTFCVIAS 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ H+ +GM+ + DY+ +++ +++ + + L KI
Sbjct: 74 LLYHVWVGMRDVWMDYVQPVGIRLALQIFTIVWLVGCAGWAIQVLWKI 121
>gi|255327363|ref|ZP_05368437.1| succinate dehydrogenase hydrophobic membrane anchor protein [Rothia
mucilaginosa ATCC 25296]
gi|255295643|gb|EET74986.1| succinate dehydrogenase hydrophobic membrane anchor protein [Rothia
mucilaginosa ATCC 25296]
Length = 161
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + +N L +H
Sbjct: 39 WLGMRLSGVVLVVLIFGHLFSNLMVGDGIHAIDFGFVGGKWANPFWQVWDLLLLWLAMLH 98
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLFS 120
G++VII+DY L++ LF FVLL+ +F+
Sbjct: 99 GANGIRVIIDDYAEKDRLRVWLKVILFAACAFVLLVGTLTIFA 141
>gi|319792255|ref|YP_004153895.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Variovorax paradoxus EPS]
gi|315594718|gb|ADU35784.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Variovorax paradoxus EPS]
Length = 121
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR T F + +A I Y+ + + + + +S
Sbjct: 14 AHYGLRDWLSQRITGGLMALFTVILLAQMIFTRGPIGYDLWAGIFAAQWMKVLTFSVIVS 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
+ H+ +GM+ + DY+ ++++ +++ + + L KI
Sbjct: 74 LLYHVWVGMRDVWMDYVQPVGIRLVLQIFTIVWLVGCAGWAIQVLWKI 121
>gi|90416068|ref|ZP_01224001.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2207]
gi|90332442|gb|EAS47639.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2207]
Length = 122
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ R +A ++IF + + + + Y ++ S++ + L +SI+
Sbjct: 10 RSGLSDWLIARVSAYVMSAYLIFIVGYLMLTPELNYADWAALNSSLPMRMFSLLTILSIA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
H +GM ++ DY+ RL+ + F L +I L ++
Sbjct: 70 AHAWIGMWCVLTDYVTVRLIGPKATALRIIFQLGMIAITLLYVI 113
>gi|260220785|emb|CBA28696.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Curvibacter putative symbiont of Hydra magnipapillata]
Length = 121
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR TA+ F I +A I + Y++ + S + + I+
Sbjct: 14 AHYGLRDWLAQRVTAVLMALFTIALLAQVILFKGPIGYDKWAGIFSQQWMKFLTFAVIIA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
+ H+ +G++ I DY+ +++ + V L+
Sbjct: 74 MLYHVWVGVRDIWMDYVKPVSIRLSLQVFS--IVWLVGCAG 112
>gi|34496521|ref|NP_900736.1| succinate dehydrogenase, hydrophobic subunit [Chromobacterium
violaceum ATCC 12472]
gi|34102375|gb|AAQ58741.1| succinate dehydrogenase, hydrophobic subunit [Chromobacterium
violaceum ATCC 12472]
Length = 114
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G +I QR TA+ + + + F + A YE S+ S+ V + +++
Sbjct: 9 AGYGLRDWIMQRVTAVVMVLYTVALALFLLALP-AGYEGWKSLFSHTWVQLFTQVTLLAL 67
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMF-----LFMNSCFVLLLIIF 116
+H+ +G++ + DY+ +++ +++ SCF+ + +
Sbjct: 68 FLHVWVGIRDVWMDYVKPVGIRLALHVFTIVWLVSCFIYSVKVV 111
>gi|254385209|ref|ZP_05000541.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1]
gi|194344086|gb|EDX25052.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1]
Length = 165
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I + +I + + + + ++ L +H
Sbjct: 57 WLFMRLSGIVLVVLVIGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 116
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 117 GSNGLRTVINDYAERANTRLWLKGLLYTATVFTILLGTLVIF 158
>gi|54296563|ref|YP_122932.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Paris]
gi|53750348|emb|CAH11742.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila str. Paris]
Length = 115
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ ++IF F + D + Q + +N +G ++++
Sbjct: 10 GNGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLNFSQWHLLFANKLFQIATTIGLMALT 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H +G+ + DY+ +++
Sbjct: 70 LHAWIGIWTVTTDYMKCTVIR 90
>gi|284029309|ref|YP_003379240.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Kribbella flavida DSM 17836]
gi|283808602|gb|ADB30441.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Kribbella flavida DSM 17836]
Length = 153
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + +A + ++ + + GD + + +N L +H
Sbjct: 36 WLFMRLSGLALVVLVLGHLFVNLMVGDGINALDFGFVAGKWANPLWQVWDLLMLWLAMLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + + +++++ +
Sbjct: 96 GTNGLRTIINDYAEKDQTRFWLKSLLVTASIVVVVLGTLVIF 137
>gi|307609336|emb|CBW98820.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Legionella pneumophila 130b]
Length = 115
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ ++IF F + D + Q + +N +G ++++
Sbjct: 10 GNGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLNFSQWHLLFANKVFQIATTIGLMALT 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H +G+ + DY+ +++
Sbjct: 70 LHAWIGIWTVTTDYMKCTVIR 90
>gi|325283228|ref|YP_004255769.1| succinate dehydrogenase cytochrome b subunit [Deinococcus
proteolyticus MRP]
gi|324315037|gb|ADY26152.1| succinate dehydrogenase cytochrome b subunit [Deinococcus
proteolyticus MRP]
Length = 125
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+I R + + I + I+ + DA Y +V+ LSN A L +H
Sbjct: 23 WIFMRVSGLILIFLVLGHIYMTFIQVSESDATYHAVVAKLSNPAWKLYDWLILTLTMLHG 82
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFV---LLLIIFCLFSL 121
G + ++EDYI + + L LFS+
Sbjct: 83 MNGARYVMEDYIRSNPNRAWVKMVVFSIAALIYALGTVGLFSI 125
>gi|148360815|ref|YP_001252022.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila str. Corby]
gi|296106121|ref|YP_003617821.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Legionella pneumophila 2300/99 Alcoy]
gi|148282588|gb|ABQ56676.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila str. Corby]
gi|295648022|gb|ADG23869.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Legionella pneumophila 2300/99 Alcoy]
Length = 115
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ ++IF F + D + Q + +N +G ++++
Sbjct: 10 GNGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLNFSQWHLLFANKIFQIATTIGLMALT 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H +G+ + DY+ +++
Sbjct: 70 LHAWIGIWTVTTDYMKCTVIR 90
>gi|298246054|ref|ZP_06969860.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ktedonobacter racemifer DSM 44963]
gi|297553535|gb|EFH87400.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Ktedonobacter racemifer DSM 44963]
Length = 136
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAP---YEQIVSVLSNVAVASIMGLGTISISVHM 81
+ R + + I +I + D Y + + +N L H
Sbjct: 21 WYYFRISGVVLIFLVIIHLTIMHVTNDVSCTTYAFVAARYANPFWRLFDWLLLTFGLTHG 80
Query: 82 QLGMQVIIEDYIHYRLLK-----IMFLFMNSCFVLLLIIFCLF 119
G++V+I+DY+ + I + + + F+L I F
Sbjct: 81 VNGLRVVIDDYVRSPGTRLVLQGIAAVLLLAFFMLGTITLITF 123
>gi|45199041|ref|NP_986070.1| AFR523Cp [Ashbya gossypii ATCC 10895]
gi|44985116|gb|AAS53894.1| AFR523Cp [Ashbya gossypii ATCC 10895]
Length = 180
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R +A++ IP + + + Y I + L + M L +
Sbjct: 61 QGSYHWYYERISAVSMIPLTLVPLYGAVTGASVEYPLIDAALCS------MLL------I 108
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H Q+G+ I DYI R I C + L+ +
Sbjct: 109 HTQMGLTSCIVDYIPKRKFGIWHNLAM-CLLYSGTAVGLYGV 149
>gi|300743788|ref|ZP_07072808.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rothia dentocariosa M567]
gi|300380149|gb|EFJ76712.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Rothia dentocariosa M567]
Length = 161
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + +N L +H
Sbjct: 39 WLGMRLSGVVLVVLIFGHLFVNLMVGDGIHAIDFGFVGGKWANPFWQIWDLLLLWLAMLH 98
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLFS 120
G++V+I+DY +++ LF S FVLL+ +F+
Sbjct: 99 GTNGIRVVIDDYAEKDRVRVWLKIILFAASAFVLLVGTLTIFA 141
>gi|262375852|ref|ZP_06069084.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter lwoffii SH145]
gi|262309455|gb|EEY90586.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Acinetobacter lwoffii SH145]
Length = 121
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + G +EQ + V + + L +
Sbjct: 6 GLTGSGSRDWFLQRVSAVVLAVYTVVVLGWILLNGGFNFEQWYGFMMTVPMKIMSLLAVL 65
Query: 76 SISVHMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ H +GM + DY+ + L + S ++ ++ + ++++
Sbjct: 66 SLVAHAWIGMWQVFTDYVTTRQMGPSASGLRLVLTSAVIIAVLAYAIWAI 115
>gi|311113029|ref|YP_003984251.1| succinate dehydrogenase cytochrome b small subunit [Rothia
dentocariosa ATCC 17931]
gi|310944523|gb|ADP40817.1| succinate dehydrogenase cytochrome b small subunit [Rothia
dentocariosa ATCC 17931]
Length = 161
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + +N L +H
Sbjct: 39 WLGMRLSGVVLVVLIFGHLFVNLMVGDGIHAIDFGFVGGKWANPFWQIWDLLLLWLAMLH 98
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLFS 120
G++V+I+DY +++ LF S FVLL+ +F+
Sbjct: 99 GTNGIRVVIDDYAEKDRVRVWLKIILFAASAFVLLVGTLTIFA 141
>gi|152967896|ref|YP_001363680.1| succinate dehydrogenase hydrophobic anchor subunit-like
[Kineococcus radiotolerans SRS30216]
gi|151362413|gb|ABS05416.1| Succinate dehydrogenase hydrophobic anchor subunit-like
[Kineococcus radiotolerans SRS30216]
Length = 169
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + I + + + GD + + S+ L +H
Sbjct: 38 WLFMRMSGVVLIVLVFGHLFVNLMTGDGIHQVDWGFVAGKWSSPFWQVWDLLMLWLAQLH 97
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +I DY + + +++++ +
Sbjct: 98 GTNGVRTVINDYAERDVTRFWLKMALYLATVIVLVVGTLVIF 139
>gi|269925902|ref|YP_003322525.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Thermobaculum terrenum ATCC BAA-798]
gi|269789562|gb|ACZ41703.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 126
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIAFF---IKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+ R + + + + + Y + + + + + + H
Sbjct: 19 WYYFRISGVLLLFLALGHVYIMHIATPVEQINYAFVAARYATPFWRTYDLVLLLLAMSHG 78
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++VII DYI R ++ L L+ + +L
Sbjct: 79 VNGIRVIIHDYIRSRSWRLFALSALYSISLIFTVLGALVIL 119
>gi|319779730|ref|YP_004130643.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Taylorella equigenitalis MCE9]
gi|317109754|gb|ADU92500.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Taylorella equigenitalis MCE9]
Length = 124
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFI----KYGDAPYEQIVSVLSNVAVASIMGLG 73
A GT FI QR TA + +FF+ + Y + + +VLS A + L
Sbjct: 14 AHYGTIGFIVQRLTATLLAIYSVFFLLTLLFTPVTYENWLHLFTFTVLSIPAGQICVTLV 73
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+++ H +G++ + DYI +L+++ +++ + ++ F +
Sbjct: 74 FFTLAWHAWIGIRDVWMDYIDCWMLRLVLFIFTIFWLIAMSMYFCFVI 121
>gi|254480494|ref|ZP_05093741.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2148]
gi|214039077|gb|EEB79737.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2148]
Length = 119
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR + + + + I + Y Q ++ ++ + L +S++
Sbjct: 10 RSGLSDWLLQRVSGVILLAYAICLGGTLV--IGVNYAQWQAMFASTGMRVFTLLAILSLA 67
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
H +GM + DY+ R+L + F + + ++
Sbjct: 68 AHAWIGMWAVGTDYLTERMLGTKGNLLRLAFQIGCSLAIFVYVI 111
>gi|56478027|ref|YP_159616.1| succinate dehydrogenase,hydrophobic membrane anchor protein
[Aromatoleum aromaticum EbN1]
gi|56314070|emb|CAI08715.1| Succinate dehydrogenase,hydrophobic membrane anchor protein
[Aromatoleum aromaticum EbN1]
Length = 114
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 49/95 (51%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G ++ QR TA+ + F+ A + YE+ + ++ A ++ + ++++H
Sbjct: 6 GQRAWMLQRVTAVVLLIFLAAAAAMLLAGLPLTYERWYELATSPHGAVLIVVLFAALALH 65
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
+G++ I+ DYIH +++ L + + ++ ++I
Sbjct: 66 GWIGIRDIVLDYIHPPAVRLPLLGLIALVLIAIVI 100
>gi|160897867|ref|YP_001563449.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Delftia acidovorans SPH-1]
gi|160363451|gb|ABX35064.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Delftia acidovorans SPH-1]
Length = 121
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G ++ QR T + F I +A I + Y+ + + + + +S
Sbjct: 14 AHYGIRDWMVQRVTGVLMALFTIVLLAKLIFSTGSVGYDLWAGIFAPQWMKFLTFAVIVS 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
++ H+ +G++ I DY+ L+++ +++ + + L +I
Sbjct: 74 LAWHVWVGVRDIWMDYVKPVGLRLVLNVFTLVWLVGCAGWGIQILWRI 121
>gi|52840773|ref|YP_094572.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627884|gb|AAU26625.1| succinate dehydrogenase hydrophobic membrane anchor protein
subunit D [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 115
Score = 43.5 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 40/81 (49%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+G ++ QR TA+ ++IF F + D + Q + +N A +G ++++
Sbjct: 10 GNGLKDWLIQRVTAVYFAAYLIFLFGFILANPDLSFSQWHLLFTNKAFQIATTIGLMALT 69
Query: 79 VHMQLGMQVIIEDYIHYRLLK 99
+H +G+ + DY+ +++
Sbjct: 70 LHAWIGIWTVTTDYMKCTVIR 90
>gi|119476703|ref|ZP_01617013.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2143]
gi|119449959|gb|EAW31195.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2143]
Length = 128
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ G ++ QR T + + + + FIA + + + ++ V +S++
Sbjct: 10 RSGLSDWMIQRITGVILLAYTL-FIAAVLFIVAPEFAEWKALFGQTWVKVFSLAAVLSVA 68
Query: 79 VHMQLGMQVIIEDY 92
H +G+ + DY
Sbjct: 69 AHAWIGLWCVSTDY 82
>gi|226305531|ref|YP_002765491.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhodococcus erythropolis PR4]
gi|229489342|ref|ZP_04383205.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Rhodococcus erythropolis SK121]
gi|226184648|dbj|BAH32752.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Rhodococcus erythropolis PR4]
gi|229323439|gb|EEN89197.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Rhodococcus erythropolis SK121]
Length = 151
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVA 65
RS + R ++ RF+ +A I ++ + + + + ++
Sbjct: 26 RSPRAKARNNFE----LYAWLFMRFSGVALIVLVLGHMFIMLMLDGGVHRLNFAFVAGRW 81
Query: 66 VASIMGLGTISISV----HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
+ +++ H G++ +I DY + + ++L++ + +
Sbjct: 82 SSPFWQFWDLTMLWLAQLHGGNGLRTVIADYSRKDSTRFWLTTILVLSMILIMGLGTYVI 141
Query: 122 L 122
Sbjct: 142 F 142
>gi|225075123|ref|ZP_03718322.1| hypothetical protein NEIFLAOT_00122 [Neisseria flavescens
NRL30031/H210]
gi|241760351|ref|ZP_04758446.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria flavescens SK114]
gi|224953607|gb|EEG34816.1| hypothetical protein NEIFLAOT_00122 [Neisseria flavescens
NRL30031/H210]
gi|241319229|gb|EER55707.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria flavescens SK114]
Length = 113
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLVYTVVLLVVLFTLP-KEYSAWQAFFDQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+++ +H +G++ + DYI L++ +++ +++ +
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGLRLFLQVATIVWLVGCLVYSV 108
>gi|289641513|ref|ZP_06473676.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Frankia symbiont of Datisca glomerata]
gi|289508723|gb|EFD29659.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Frankia symbiont of Datisca glomerata]
Length = 145
Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 33/102 (32%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I + ++ + + + ++ + L + +H
Sbjct: 37 WLFMRVSGILLVFLVLGHLFIMNILDGGVQRIGFGFVAGRWASPFWRTWDLLMLVLAELH 96
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +I DY + + + V+ L +F
Sbjct: 97 GTNGLRTVINDYAERPQTRFWLKMLLYVSAFLVISLGSLVIF 138
>gi|50312329|ref|XP_456198.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645334|emb|CAG98906.1| KLLA0F25080p [Kluyveromyces lactis]
Length = 193
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 15/104 (14%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R TA++ +P YG S + S++ + +
Sbjct: 68 HGSYHWDYERITAVSLVPLT-----MVPLYGAMSSATFASGFPFPVIDSLLASTIL---I 119
Query: 80 HMQLGMQVIIEDYIH-------YRLLKIMFLFMNSCFVLLLIIF 116
H LG+ I DYI ++ K +S + + +
Sbjct: 120 HAYLGITSCIIDYIPKRKFGFWHKAAKFALALGSSFSLYGIYVL 163
>gi|260767666|ref|ZP_05876601.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
furnissii CIP 102972]
gi|260617175|gb|EEX42359.1| succinate dehydrogenase hydrophobic membrane anchor protein [Vibrio
furnissii CIP 102972]
gi|315179502|gb|ADT86416.1| Succinate dehydrogenase, hydrophobic anchor subunit [Vibrio
furnissii NCTC 11218]
Length = 97
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Query: 29 RFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVI 88
R +AI + I+ I F + D Y L + I +H +G+ +
Sbjct: 3 RASAIIMTLYTIY-IVSFCAFTDISYVSWTQFFGGTFTKVFTMLALVCILIHGWIGLWQV 61
Query: 89 IEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ DY+ L+ + + LF
Sbjct: 62 LTDYVKCSKLRGGLQLVVIAVLFGYFFSGLF 92
>gi|33519788|ref|NP_878620.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Blochmannia floridanus]
gi|33504133|emb|CAD83395.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Candidatus Blochmannia floridanus]
Length = 115
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 44/98 (44%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G ++ R +AI I + ++ F + YE+ + + + + + H
Sbjct: 12 GVYEWLIVRISAILTILYSVYLFNFINIDDNFSYEKWCIFFYDKKIKIFNTIVLLMLLKH 71
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+GM+ I+EDYI +L+ + + + + + ++F +
Sbjct: 72 TWIGMRHILEDYISSIILRRLSIGLIHIILYVYLLFGI 109
>gi|319637650|ref|ZP_07992416.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria mucosa C102]
gi|317400805|gb|EFV81460.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Neisseria mucosa C102]
Length = 113
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLVYTVVLLVVLFTLP-KEYSAWQAFFDQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|261379698|ref|ZP_05984271.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria subflava NJ9703]
gi|284797362|gb|EFC52709.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Neisseria subflava NJ9703]
Length = 113
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 13 RGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGL 72
R + A G + QR TA+ + + + + Y + V +
Sbjct: 4 RKLTGAHYGLRDWAMQRATAVIMLVYTVVLLVVLFTLP-KEYSAWQAFFDQTWVKVFTQV 62
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+++ +H +G++ + DYI +++ +++ +++ +
Sbjct: 63 SFLAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSV 108
>gi|268315784|ref|YP_003289503.1| hypothetical protein Rmar_0209 [Rhodothermus marinus DSM 4252]
gi|262333318|gb|ACY47115.1| hypothetical protein Rmar_0209 [Rhodothermus marinus DSM 4252]
Length = 167
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 53 PYEQIVSVLSNVAVASIM----GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
PY+ ++ L++ A + L I H G+ I+ DYI + +++ ++
Sbjct: 84 PYDVVMLRLADPVYAVLWKGFNILFLIFALHHGFYGLNNILTDYIRNPIGRVLAQTLSWT 143
Query: 109 FVLLLIIFCLFSLL 122
L L+I L+S++
Sbjct: 144 LALALLIVGLYSII 157
>gi|126433857|ref|YP_001069548.1| succinate dehydrogenase subunit D [Mycobacterium sp. JLS]
gi|126233657|gb|ABN97057.1| succinate dehydrogenase subunit D [Mycobacterium sp. JLS]
Length = 159
Score = 42.7 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ +A + + + + + + + + S+ + L +H
Sbjct: 51 WLFMRFSGMALVFLALGHLFIMLMWDNGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 110
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++VII DY + + + ++ +++ + LL
Sbjct: 111 GGNGLRVIISDYARKDSTRFWLNSLLALSMIFILVLGTYVLL 152
>gi|295396420|ref|ZP_06806582.1| succinate dehydrogenase cytochrome b small subunit [Brevibacterium
mcbrellneri ATCC 49030]
gi|294970722|gb|EFG46635.1| succinate dehydrogenase cytochrome b small subunit [Brevibacterium
mcbrellneri ATCC 49030]
Length = 149
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFI----KYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + + + ++ +H
Sbjct: 28 WLFMRVSGLILVILIFGHLFVNLWQGEGVQGLDFGFVAGKWASPFWQIWDLAMLWLAMLH 87
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ II DY ++ + ++++ +
Sbjct: 88 GTNGMRTIINDYAEKPGTNVVLQLVLYIASAIVVVLGTLVIF 129
>gi|91208852|ref|YP_539013.1| succinate dehydrogenase subunit 4 [Physcomitrella patens]
gi|90991392|dbj|BAE93084.1| succinate dehydrogenase subunit 4 [Physcomitrella patens]
gi|328775201|gb|AEB39996.1| succinate dehydrogenase subunit 4 [Funaria hygrometrica]
Length = 86
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 23/91 (25%)
Query: 23 GHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
GH++ QR TA + IP I+ + S + L I + H+
Sbjct: 9 GHWLLQRMTAASLIPTILI-----------------------SNVSTLILLNILLFWHIH 45
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
+G++ I+ DY+H+ + + L + F L++
Sbjct: 46 VGIEEILTDYVHHEITRNWILILFRVFCLII 76
>gi|83814218|ref|YP_444631.1| succinate dehydrogenase, membrane subunit, putative [Salinibacter
ruber DSM 13855]
gi|294506382|ref|YP_003570440.1| Succinate dehydrogenase flavoprotein subunit [Salinibacter ruber
M8]
gi|83755612|gb|ABC43725.1| succinate dehydrogenase, membrane subunit, putative [Salinibacter
ruber DSM 13855]
gi|294342710|emb|CBH23488.1| Succinate dehydrogenase flavoprotein subunit [Salinibacter ruber
M8]
Length = 150
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 53 PYEQIVSVLSNVAVASIM----GLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
PY+ ++ L++ A + L + H G+ ++ DYI + +++ ++
Sbjct: 73 PYQVVMQRLADPVYAVLWKGFNILFLVVALHHGFYGLNNVMTDYIRDPMGRLVAKSLSWT 132
Query: 109 FVLLLIIFCLFSLL 122
L L+I +S+L
Sbjct: 133 VALGLLIIGTYSVL 146
>gi|256380450|ref|YP_003104110.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Actinosynnema mirum DSM 43827]
gi|255924753|gb|ACU40264.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Actinosynnema mirum DSM 43827]
Length = 138
Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + +A + ++ + + + ++ +H
Sbjct: 27 WLFMRLSGVALLVLVLGHLFIMNILDGGVHRINFGFVAGRWASPFWQIWDLAMLWLAQIH 86
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +I DY + + ++L+I+ + +
Sbjct: 87 GGNGLRTVINDYARKDATRFWLKMLLYVSMVLIIVTGTYVVF 128
>gi|254434381|ref|ZP_05047889.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus oceani AFC27]
gi|207090714|gb|EDZ67985.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Nitrosococcus oceani AFC27]
Length = 89
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 41/89 (46%)
Query: 35 NIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIH 94
+ ++FF+A ++ YE +S+ V+ ++ L + +H +G++ II DY+
Sbjct: 1 MLVLLLFFLARLMQGSFKTYEAWREWISDPLVSIMVALFFGVLLLHSWVGLRDIILDYVR 60
Query: 95 YRLLKIMFLFMNSCFVLLLIIFCLFSLLK 123
L++ + + + + LL+
Sbjct: 61 PVSLRLFAHSLIVVVYSGIGFWVIRILLR 89
>gi|150406492|ref|YP_001315098.1| succinate:cytochrome c oxidoreductase subunit 4 [Chlorokybus
atmophyticus]
gi|126507729|gb|ABO15126.1| succinate:cytochrome c oxidoreductase subunit 4 [Chlorokybus
atmophyticus]
Length = 109
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 23/94 (24%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
+ + H+ QR TAI P I+ S++ L +
Sbjct: 27 SGKASTHWHIQRLTAILLFPTILSL-----------------------NPSLILLLIAVL 63
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVL 111
+H+Q G+ I++DY+H + +++ + + F+L
Sbjct: 64 PLHIQAGISEILDDYVHNEVTRMVSILLARLFIL 97
>gi|22550364|ref|NP_689351.1| succinate:cytochrome c oxidoreductase subunit 4
[Chaetosphaeridium globosum]
gi|22417030|gb|AAM96629.1|AF494279_34 succinate:cytochrome c oxidoreductase subunit 4
[Chaetosphaeridium globosum]
Length = 79
Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 23/77 (29%)
Query: 23 GHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
H++ QR TA P ++F I+ + + + HMQ
Sbjct: 2 SHWLYQRATAAILFPTLLFADVS-----------------------ILIVLNLVLFWHMQ 38
Query: 83 LGMQVIIEDYIHYRLLK 99
+G+Q I+ DYIH + +
Sbjct: 39 IGIQEILSDYIHNEVTR 55
>gi|256389983|ref|YP_003111547.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Catenulispora acidiphila DSM 44928]
gi|256356209|gb|ACU69706.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Catenulispora acidiphila DSM 44928]
Length = 151
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 14/107 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + + ++ L +H
Sbjct: 42 WLFMRASGVLLVFLVLGHLFIMMVTDGGVEKIGFAFVAGRWASPWWQFWDLLQLWLAMIH 101
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAIL 127
GM+ +I DY + +L + ++L IA+
Sbjct: 102 GSNGMRTVINDYADKDRTR----------AILKGLLYTAAVLTIALG 138
>gi|182436481|ref|YP_001824200.1| putative succinate dehydrogenase membrane subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326777102|ref|ZP_08236367.1| putative succinate dehydrogenase membrane subunit [Streptomyces cf.
griseus XylebKG-1]
gi|178464997|dbj|BAG19517.1| putative succinate dehydrogenase membrane subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326657435|gb|EGE42281.1| putative succinate dehydrogenase membrane subunit [Streptomyces cf.
griseus XylebKG-1]
Length = 160
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I +I + + + + ++ +H
Sbjct: 52 WLFMRLSGILLTVLVIGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLTMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +I DY + + + F +LL +F
Sbjct: 112 GGNGLRTVINDYAERDNTRFWLKMLLYTATVFTVLLGTLVIF 153
>gi|94984995|ref|YP_604359.1| succinate dehydrogenase, cytochrome b subunit [Deinococcus
geothermalis DSM 11300]
gi|94555276|gb|ABF45190.1| succinate dehydrogenase, cytochrome b subunit [Deinococcus
geothermalis DSM 11300]
Length = 125
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+I R + + + I I+ + DA ++ +V+ L N A L + +H
Sbjct: 23 WIFMRISGLILVFLILGHIYMTFIQVSESDATFDAVVAKLQNPAWKFYDWLILLLAMLHG 82
Query: 82 QLGMQVIIEDYIHYRLLKIMF--LFMNSC-FVLLLIIFCLFSL 121
G + IEDY+ R + +F C + LL LFS+
Sbjct: 83 VNGARYSIEDYVRSRPNRAWVKGIFYTICAVIFLLGTVGLFSI 125
>gi|111023210|ref|YP_706182.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhodococcus jostii RHA1]
gi|226365715|ref|YP_002783498.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhodococcus opacus B4]
gi|110822740|gb|ABG98024.1| probable succinate dehydrogenase hydrophobic membrane anchor
protein [Rhodococcus jostii RHA1]
gi|226244205|dbj|BAH54553.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhodococcus opacus B4]
Length = 147
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ RF+ +A I ++ + + D + + ++ + +++ H
Sbjct: 37 WLFMRFSGLALIFLVLGHLFIMLMLDDGVHRINFAFVAGRWSSPFWQFWDLTMLWLAQLH 96
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +I DY + + ++L++ + +
Sbjct: 97 GGNGLRTVIADYSRKDSTRFWLTTILVLSMILIMGLGTYVIF 138
>gi|262369423|ref|ZP_06062751.1| succinate dehydrogenase [Acinetobacter johnsonii SH046]
gi|262315491|gb|EEY96530.1| succinate dehydrogenase [Acinetobacter johnsonii SH046]
Length = 121
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTI 75
G G+ + QR +A+ + + + + + G YEQ + + + L +
Sbjct: 6 GLTGSGSRDWFIQRVSAVVLAVYTVVVLGWILCNGGFSYEQWYGFMMTAPMKILSLLAVL 65
Query: 76 SISVHMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
S+ H +GM + DY+ + L + S ++ + + ++++
Sbjct: 66 SLVAHAWIGMWQVFTDYVTTRQMGPSASGLRLVLTSAVIIAVFAYAIWAI 115
>gi|226356177|ref|YP_002785917.1| succinate dehydrogenase, hydrophobic membrane anchor protein SdhD
[Deinococcus deserti VCD115]
gi|226318167|gb|ACO46163.1| putative Succinate dehydrogenase, hydrophobic membrane anchor
protein SdhD [Deinococcus deserti VCD115]
Length = 125
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+I R + + + + I+ + DA ++ +V+ LSN A + +H
Sbjct: 23 WIFMRISGLILVFLVLGHIYMTFIQVSESDATFDAVVAKLSNPAWKFYDWMILFLSLLHG 82
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
G + IEDYI R + + + ++ ++F ++ I+I
Sbjct: 83 ANGARYSIEDYIRSRPNR--AWVKSIFYTVIALVFAFGTIGLISI 125
>gi|239943741|ref|ZP_04695678.1| putative succinate dehydrogenase membrane subunit [Streptomyces
roseosporus NRRL 15998]
gi|239990193|ref|ZP_04710857.1| putative succinate dehydrogenase membrane subunit [Streptomyces
roseosporus NRRL 11379]
gi|291447201|ref|ZP_06586591.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces roseosporus NRRL 15998]
gi|291350148|gb|EFE77052.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces roseosporus NRRL 15998]
Length = 160
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + I +I + + + + ++ + + +H
Sbjct: 52 WLFMRLSGILLTVLVIGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQAWDLIMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +I DY + + + F +LL +F
Sbjct: 112 GGNGLRTVINDYAERDNTRFWLKMLLYTATVFTVLLGTLVIF 153
>gi|297622604|ref|YP_003704038.1| succinate dehydrogenase, membrane subunit (SdhD) [Truepera
radiovictrix DSM 17093]
gi|297163784|gb|ADI13495.1| succinate dehydrogenase, membrane subunit (SdhD) [Truepera
radiovictrix DSM 17093]
Length = 152
Score = 42.0 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + +A I ++ I G + + LS V L +H
Sbjct: 25 WVFMRVSGLALIFLTFGHLYMSNIVIDAGQIDFSYVARRLSITWVKIYDTLLLGLAVLHG 84
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
G + IEDY + + +L++I + SL
Sbjct: 85 VNGARYSIEDYARHPGWRFGIKMGLYSATVLVMIIGIISL 124
>gi|38638303|ref|NP_943706.1| succinate:cytochrome c oxidoreductase subunit 4 [Chara vulgaris]
gi|32966617|gb|AAP92200.1| succinate:cytochrome c oxidoreductase subunit 4 [Chara vulgaris]
Length = 92
Score = 42.0 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 23 GHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
H++ QR TA IP I+ A S + L I + HM
Sbjct: 9 AHWLLQRITAAFLIPTILL-----------------------ANVSTLILLNILLFWHMH 45
Query: 83 LGMQVIIEDYIHYRLLK-IMFLFMNSCFVLLLIIFCLFSLL 122
+G++ I+ DYIH+ + + + LF+ ++++ +F +L
Sbjct: 46 VGIEEILADYIHHEVTRNFICLFLRVFVLIIIKYVFVFCVL 86
>gi|260907393|ref|ZP_05915715.1| succinate dehydrogenase cytochrome b556 subunit [Brevibacterium
linens BL2]
Length = 150
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFI----KYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + + + ++ L +H
Sbjct: 28 WLFMRISGVVLVILIFGHLFVNLWAGEGVQAIDFGFVAGKWASPFWQIWDLLMLWLAMLH 87
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY ++ + +++I+ +
Sbjct: 88 GTNGLRTIIMDYAEKPGTRMALQVILYIASIIVIVLGTLVIF 129
>gi|11467130|ref|NP_054431.1| succinate dehydrogenase subunit 4 [Marchantia polymorpha]
gi|262186732|ref|YP_003275991.1| succinate dehydrogenase subunit 4 [Pleurozia purpurea]
gi|586765|sp|P38460|YMF17_MARPO RecName: Full=Uncharacterized mitochondrial protein ymf17; AltName:
Full=ORF86A
gi|786215|gb|AAC09428.1| ORF86a [Marchantia polymorpha]
gi|237780729|gb|ACR19375.1| succinate dehydrogenase subunit 4 [Pleurozia purpurea]
Length = 86
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 23/91 (25%)
Query: 23 GHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
GH++ QR TA IP I+ A S + L I + H+
Sbjct: 9 GHWLLQRITAAFLIPTILI-----------------------ANVSTLILLNILLFWHIH 45
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
+G++ I+ DY+H+ + + L + F L++
Sbjct: 46 VGIEEILADYVHHEVTRNWILILLRVFCLII 76
>gi|15805977|ref|NP_294677.1| succinate dehydrogenase, hydrophobic subunit SdhD [Deinococcus
radiodurans R1]
gi|6458674|gb|AAF10526.1|AE001947_9 succinate dehydrogenase, hydrophobic subunit SdhD, putative
[Deinococcus radiodurans R1]
Length = 125
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+I R + + + + I+ + DA Y +V+ LSN A L +H
Sbjct: 23 WIFMRISGLILVFLVLGHIYMTFIQVSEADATYVAVVNKLSNPAWKFYDWLILALALLHG 82
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
G + IEDY+ R + + + ++ ++F
Sbjct: 83 ANGARYSIEDYVRTRPDR--AWIKGTFYTVIALLFA 116
>gi|302342524|ref|YP_003807053.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfarculus
baarsii DSM 2075]
gi|301639137|gb|ADK84459.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfarculus
baarsii DSM 2075]
Length = 125
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFF--IKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
G ++ QR + +A + ++I + I G +++I++V+ + +
Sbjct: 13 HPGYIAWLFQRISGLALVLYLIMHVYVIHHIALGRQAFDEIMAVVQSPLFHLAEAALLAA 72
Query: 77 ISVHMQLGMQVIIEDYIH-YRLLKIMFLFM-NSCFVLLLIIFCLFSLLKIAI 126
+ H G++VI+ DY KI + ++++ ++K+A+
Sbjct: 73 VVYHGVNGLRVILLDYGRAADKQKISPWVLGVMSLCAVIVLAGAIPMIKLAL 124
>gi|225174743|ref|ZP_03728741.1| hypothetical protein DealDRAFT_0596 [Dethiobacter alkaliphilus AHT
1]
gi|225169870|gb|EEG78666.1| hypothetical protein DealDRAFT_0596 [Dethiobacter alkaliphilus AHT
1]
Length = 100
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
++ QR T I + I + I +I +LS+ VA++ GL +++ H+ G
Sbjct: 4 WLSQRITGIFLMFLIPWKIYSGYALTGQ-VPRIEGLLSSHIVATLDGLLIVTVIFHLAYG 62
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
++V++ D + + + + LLL ++ L+ +
Sbjct: 63 LRVMLID--AGIKQEKVLFYAATALSLLLSVYALYYI 97
>gi|118594807|ref|ZP_01552154.1| succinate dehydrogenase (membrane anchor subunit) [Methylophilales
bacterium HTCC2181]
gi|118440585|gb|EAV47212.1| succinate dehydrogenase (membrane anchor subunit) [Methylophilales
bacterium HTCC2181]
Length = 118
Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIM 70
+ + S G ++ QRFTA+ ++I Y ++ S+ + +
Sbjct: 2 NAKSLKSPFGGMTQWLYQRFTALFMTTYMISLALILTTYRPLTFDVWASLFDHWTIKYAT 61
Query: 71 GLGTISISVHMQLGMQVIIEDYIHYRLLKIMF 102
+ I + H +G+ I EDYI ++
Sbjct: 62 LVFFILMFFHAWIGILHITEDYIKVIAVRTTI 93
>gi|145225423|ref|YP_001136101.1| putative succinate dehydrogenase [Mycobacterium gilvum PYR-GCK]
gi|145217909|gb|ABP47313.1| succinate dehydrogenase subunit D [Mycobacterium gilvum PYR-GCK]
Length = 167
Score = 41.2 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ I + + + + + + + + S+ + L +H
Sbjct: 59 WLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 118
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ II DY K + + + ++ + LL
Sbjct: 119 GGNGMRTIIADYTRKDSTKFWLNTLLALSMAFTLVLGTYVLL 160
>gi|296168860|ref|ZP_06850532.1| succinate dehydrogenase cytochrome b small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896477|gb|EFG76127.1| succinate dehydrogenase cytochrome b small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 156
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ +A I + + + + D + + ++ +H
Sbjct: 47 WLFMRFSGVALIVLAVGHLFIMLMWDDGVYRIDFNYVAQRWASPFWQFWDLALLWLAQLH 106
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + L
Sbjct: 107 GGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGFTLVLGTYVLV 148
>gi|15610453|ref|NP_217834.1| succinate dehydrogenase hydrophobic membrane anchor subunit SdhD
[Mycobacterium tuberculosis H37Rv]
gi|148663181|ref|YP_001284704.1| succinate dehydrogenase hydrophobic membrane anchor subunit SdhD
[Mycobacterium tuberculosis H37Ra]
gi|167968952|ref|ZP_02551229.1| succinate dehydrogenase hydrophobic membrane anchor subunit SdhD
[Mycobacterium tuberculosis H37Ra]
gi|2894227|emb|CAA17089.1| PROBABLE SUCCINATE DEHYDROGENASE (HYDROPHOBIC MEMBRANE ANCHOR
SUBUNIT) SDHD (SUCCINIC DEHYDROGENASE) (FUMARATE
REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC
HYDROGENASE) [Mycobacterium tuberculosis H37Rv]
gi|148507333|gb|ABQ75142.1| succinate dehydrogenase hydrophobic membrane anchor subunit SdhD
[Mycobacterium tuberculosis H37Ra]
Length = 144
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 36 WLFMRFSGVVLVFLAIGHVFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 96 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 137
>gi|15827294|ref|NP_301557.1| succinate dehydrogenase hydrophobic membrane anchor protei
[Mycobacterium leprae TN]
gi|221229772|ref|YP_002503188.1| putative succinate dehydrogenase hydrophobic membrane anchor protei
[Mycobacterium leprae Br4923]
gi|467180|gb|AAA17338.1| L308_F1_25 [Mycobacterium leprae]
gi|13092843|emb|CAC30207.1| putative succinate dehydrogenase hydrophobic membrane anchor protei
[Mycobacterium leprae]
gi|219932879|emb|CAR70792.1| putative succinate dehydrogenase hydrophobic membrane anchor protei
[Mycobacterium leprae Br4923]
Length = 163
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ +A + + + + + + + S+ VH
Sbjct: 55 WLFMRFSGVALVVLAFGHLFIMLMWDNGVYRIDFNFVAQRWSSPFWRFWDLALLWLAQVH 114
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLFS 120
G++ II+DY + L ++ F L+L + L S
Sbjct: 115 GGNGLRNIIDDYSRKDHTRFWLNSLLLLSMGFTLVLGSYVLLS 157
>gi|322694650|gb|EFY86474.1| succinate dehydrogenase cytochrome b small subunit precursor
[Metarhizium acridum CQMa 102]
Length = 163
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A +P I AP+ S ++ + ++ +
Sbjct: 60 HGSYHWTFERLLAAGLVPLTI-----------APFA------SGSLNPTMDAVLCSAVLI 102
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H +G Q +I DYI R L+ +F + + +++ +
Sbjct: 103 HSHIGFQSVIIDYIPKRRYPGLRKLFWWGLNAATVVVGV 141
>gi|312140770|ref|YP_004008106.1| succinate dehydrogenase membrane subunit sdhd2 [Rhodococcus equi
103S]
gi|325675590|ref|ZP_08155274.1| succinate dehydrogenase cytochrome b small subunit [Rhodococcus
equi ATCC 33707]
gi|311890109|emb|CBH49427.1| succinate dehydrogenase membrane subunit SdhD2 [Rhodococcus equi
103S]
gi|325553561|gb|EGD23239.1| succinate dehydrogenase cytochrome b small subunit [Rhodococcus
equi ATCC 33707]
Length = 147
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ RF+ +A I ++ + + D + + ++ + +++ H
Sbjct: 37 WLFMRFSGLALIILVLGHLFIMLMLDDGVHRINFAFVAGRWSSPFWQFWDLTMLWLAQLH 96
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +I DY + + ++L++ + +
Sbjct: 97 GGNGLRTVIADYSRKDSTRFWLNTILVVSMILIMGLGTYVIF 138
>gi|308406119|ref|ZP_07669513.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu012]
gi|308364447|gb|EFP53298.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu012]
Length = 149
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 41 WLFMRFSGVVLVFLAIGHVFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 100
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 101 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 142
>gi|83815294|ref|YP_444632.1| putative succinate dehydrogenase membrane subunit [Salinibacter
ruber DSM 13855]
gi|83756688|gb|ABC44801.1| putative succinate dehydrogenase membrane subunit [Salinibacter
ruber DSM 13855]
Length = 164
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTISI 77
+ G ++ R T + + ++I I D + +++ + +++
Sbjct: 42 RTGMFAWMMHRLTGVGLVVYLIVHIWGLTALTDPETFNALIAKYHSPIFKVGEFALLVAV 101
Query: 78 SVHMQLGMQVIIEDYIH-YRLLKIMFLFMNSCFVLLLIIFC 117
+ H G+++++ D++ K +F + + +++ +
Sbjct: 102 AYHAMNGLRLVLIDFLGWSPKQKKLFWTLGAVTAVIIAVGG 142
>gi|315445771|ref|YP_004078650.1| succinate dehydrogenase subunit D [Mycobacterium sp. Spyr1]
gi|315264074|gb|ADU00816.1| succinate dehydrogenase subunit D [Mycobacterium sp. Spyr1]
Length = 167
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ I + + + + + + + S+ + L +H
Sbjct: 59 WLFMRFSGIVLVFLALGHLFIMLMWESGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 118
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ II DY K + + + ++ + LL
Sbjct: 119 GGNGMRTIIADYTRKDSTKFWLNTLLALSMAFTLVLGTYVLL 160
>gi|108798200|ref|YP_638397.1| succinate dehydrogenase subunit D [Mycobacterium sp. MCS]
gi|119867296|ref|YP_937248.1| succinate dehydrogenase subunit D [Mycobacterium sp. KMS]
gi|108768619|gb|ABG07341.1| succinate dehydrogenase subunit D [Mycobacterium sp. MCS]
gi|119693385|gb|ABL90458.1| succinate dehydrogenase subunit D [Mycobacterium sp. KMS]
Length = 159
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + + + + + + + + S+ + L +H
Sbjct: 51 WLFMRFSGMVLVFLALGHLFIMLMWDNGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 110
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++VII DY + + + ++ +++ + LL
Sbjct: 111 GGNGLRVIISDYARKDSTRFWLNSLLALSMIFILVLGTYVLL 152
>gi|110834360|ref|YP_693219.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alcanivorax borkumensis SK2]
gi|110647471|emb|CAL16947.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alcanivorax borkumensis SK2]
Length = 123
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 43/104 (41%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ QR +A+ ++I + + I GD Y + + ++ + L IS+
Sbjct: 10 RNGLYDWLIQRVSAVIIGVYMIGMLGYLITVGDLDYSSWKAFMGSICMQIANTLLVISVV 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
H +G+ + DY+ + + + + + LL
Sbjct: 70 AHTWVGVWGVTTDYLTSLTFGKAATGVRLIAQVAIALALVVYLL 113
>gi|254429440|ref|ZP_05043147.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alcanivorax sp. DG881]
gi|196195609|gb|EDX90568.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alcanivorax sp. DG881]
Length = 123
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G ++ QR +A+ ++I + + I GD Y + + ++ + L IS++
Sbjct: 10 RNGLYDWLIQRVSAVIIGVYMIGMLGYLITAGDLDYGSWKAFMGSICMQIANTLLVISVA 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
H +G+ + DY+ + L + + + LL
Sbjct: 70 AHTWVGLWGVTTDYLTSLTFGKAATGVRLIAQLAIALALVVYLL 113
>gi|163839067|ref|YP_001623472.1| succinate dehydrogenase cytochrome b556 subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162952543|gb|ABY22058.1| succinate dehydrogenase cytochrome b556 subunit [Renibacterium
salmoninarum ATCC 33209]
Length = 158
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + + I I + + G+ + + ++ L +H
Sbjct: 35 WLFMRLSGVILIVLIFGHLFVNLMVGEGVHAIDFGFVAGKWASPFWQIWDLLMLWLAMLH 94
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY +I + +++I +
Sbjct: 95 GTNGVRTIINDYAEKTGTRIALKTVLYVATVVIITLGTLVIF 136
>gi|120402594|ref|YP_952423.1| putative succinate dehydrogenase [Mycobacterium vanbaalenii PYR-1]
gi|119955412|gb|ABM12417.1| succinate dehydrogenase subunit D [Mycobacterium vanbaalenii PYR-1]
Length = 163
Score = 40.8 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ I + + + + + + + + S+ + L +H
Sbjct: 55 WLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAERWSSPFWQTWDLLLLWLAQLH 114
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ II DY K + + + ++ + LL
Sbjct: 115 GGNGMRTIIADYSRKDSTKFWLNTLLALSMAFTLVLGTYVLL 156
>gi|326793535|ref|YP_004311355.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
gi|326544299|gb|ADZ89519.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Marinomonas mediterranea MMB-1]
Length = 116
Score = 40.8 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
+ GT ++ QR + + + + FI+ FI YE V + S + + +
Sbjct: 10 RSGTREWLFQRLSNLLICVWSVVFISLFISAPQLNYESWVQLFSPLWFKLYSSATLLIVC 69
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
++ L I DYI + +++ LL + LF
Sbjct: 70 LNSVLAGWQIGTDYIKANAVNWVYMQFIRLVSLLYAVLGLF 110
>gi|326381947|ref|ZP_08203640.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Gordonia neofelifaecis NRRL B-59395]
gi|326199373|gb|EGD56554.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Gordonia neofelifaecis NRRL B-59395]
Length = 143
Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ RF+ +A I + + + + S +++ + + +++ H
Sbjct: 36 WMFMRFSGLALIVLTFGHMFIMLMWDSGVHRIDASFVADRWKSPFWQVWDLTMLWLAQLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +I DY + + + ++L+++ +++L
Sbjct: 96 GGNGVRTVIADYSRKDSTRFWLNTLLALSMILILVLGTYAIL 137
>gi|215405332|ref|ZP_03417513.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis 02_1987]
gi|215447625|ref|ZP_03434377.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T85]
gi|289747136|ref|ZP_06506514.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis 02_1987]
gi|294993740|ref|ZP_06799431.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mycobacterium tuberculosis 210]
gi|289687664|gb|EFD55152.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis 02_1987]
gi|326902454|gb|EGE49387.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis W-148]
Length = 144
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 36 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 96 GGNGLRTIIDDYSRKDATRFWLNSLLVLSMLFTLMLGTYVIV 137
>gi|294506383|ref|YP_003570441.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Salinibacter ruber M8]
gi|294342711|emb|CBH23489.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Salinibacter ruber M8]
Length = 153
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTISI 77
+ G ++ R T + + ++I I D + +++ + +++
Sbjct: 31 RTGMFAWMMHRLTGVGLVVYLIVHIWGLTALTDPETFNALIAKYHSPIFKVGEFALLVAV 90
Query: 78 SVHMQLGMQVIIEDYIH-YRLLKIMFLFMNSCFVLLLIIFC 117
+ H G+++++ D++ K +F + + +++ +
Sbjct: 91 AYHAMNGLRLVLIDFLGWSPKQKKLFWTLGAVTAVIIAVGG 131
>gi|322705581|gb|EFY97166.1| succinate dehydrogenase cytochrome b small subunit [Metarhizium
anisopliae ARSEF 23]
Length = 167
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A +P I AP+ S ++ + ++ +
Sbjct: 64 HGSYHWTFERLLAAGLVPLTI-----------APFA------SGSLNPTMDAILCSAVLI 106
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H +G Q +I DYI R L+ +F + + +++ +
Sbjct: 107 HSHIGFQSVIIDYIPKRRYPGLRRLFWWGLNAATVVVGV 145
>gi|317508112|ref|ZP_07965796.1| succinate dehydrogenase subunit D protein [Segniliparus rugosus
ATCC BAA-974]
gi|316253623|gb|EFV13009.1| succinate dehydrogenase subunit D protein [Segniliparus rugosus
ATCC BAA-974]
Length = 156
Score = 40.4 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 9/105 (8%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 23 GHFIKQRFTAIANIPFIIFFIAFFIKYG-----DAPYEQIVSVLSNVAVASIMGLGTISI 77
+ R + +A + + + + + +
Sbjct: 48 HAWFFMRISGVALVFLALGHMLIMLTITPDGVHRVSSTFVAERWHQPFWRGWDLIMLWLA 107
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+H G++V+I+DY +++ + + ++ ++ ++L+
Sbjct: 108 ELHGTNGVRVVIDDYARKPATRLVLRTILALSAIITLVAGSYALI 152
>gi|15842909|ref|NP_337946.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mycobacterium tuberculosis CDC1551]
gi|31794498|ref|NP_856991.1| succinate dehydrogenase hydrophobic membrane anchor subunit SdhD
[Mycobacterium bovis AF2122/97]
gi|121639241|ref|YP_979465.1| putative succinate dehydrogenase (hydrophobic membrane anchor
subunit) sdhD [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148824521|ref|YP_001289275.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis F11]
gi|215413197|ref|ZP_03421898.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis 94_M4241A]
gi|215428804|ref|ZP_03426723.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T92]
gi|215432282|ref|ZP_03430201.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis EAS054]
gi|218755101|ref|ZP_03533897.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis GM 1503]
gi|219559380|ref|ZP_03538456.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T17]
gi|224991700|ref|YP_002646389.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|224991719|ref|YP_002646408.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|224991738|ref|YP_002646427.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253800362|ref|YP_003033363.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis KZN 1435]
gi|254233927|ref|ZP_04927252.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis C]
gi|254365939|ref|ZP_04981984.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis str. Haarlem]
gi|254552421|ref|ZP_05142868.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260188367|ref|ZP_05765841.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis CPHL_A]
gi|260202481|ref|ZP_05769972.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T46]
gi|260206671|ref|ZP_05774162.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis K85]
gi|289444901|ref|ZP_06434645.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T46]
gi|289449008|ref|ZP_06438752.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis CPHL_A]
gi|289555596|ref|ZP_06444806.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis KZN 605]
gi|289571546|ref|ZP_06451773.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T17]
gi|289576039|ref|ZP_06456266.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis K85]
gi|289752015|ref|ZP_06511393.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T92]
gi|289755441|ref|ZP_06514819.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis EAS054]
gi|289763507|ref|ZP_06522885.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis GM 1503]
gi|297635973|ref|ZP_06953753.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mycobacterium tuberculosis KZN 4207]
gi|297732970|ref|ZP_06962088.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mycobacterium tuberculosis KZN R506]
gi|313660302|ref|ZP_07817182.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Mycobacterium tuberculosis KZN V2475]
gi|13883243|gb|AAK47760.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Mycobacterium tuberculosis CDC1551]
gi|31620094|emb|CAD95438.1| PROBABLE SUCCINATE DEHYDROGENASE (HYDROPHOBIC MEMBRANE ANCHOR
SUBUNIT) SDHD (SUCCINIC DEHYDROGENASE) (FUMARATE
REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC
HYDROGENASE) [Mycobacterium bovis AF2122/97]
gi|121494889|emb|CAL73372.1| Probable succinate dehydrogenase (hydrophobic membrane anchor
subunit) sdhD [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124599456|gb|EAY58560.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis C]
gi|134151452|gb|EBA43497.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis str. Haarlem]
gi|148723048|gb|ABR07673.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis F11]
gi|224774815|dbj|BAH27621.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|224774834|dbj|BAH27640.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|224774853|dbj|BAH27659.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321865|gb|ACT26468.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis KZN 1435]
gi|289417820|gb|EFD15060.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T46]
gi|289421966|gb|EFD19167.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis CPHL_A]
gi|289440228|gb|EFD22721.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis KZN 605]
gi|289540470|gb|EFD45048.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis K85]
gi|289545300|gb|EFD48948.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T17]
gi|289692602|gb|EFD60031.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T92]
gi|289696028|gb|EFD63457.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis EAS054]
gi|289711013|gb|EFD75029.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD
[Mycobacterium tuberculosis GM 1503]
gi|328460095|gb|AEB05518.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis KZN 4207]
Length = 144
Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 36 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 96 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 137
>gi|306782370|ref|ZP_07420707.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu002]
gi|306795081|ref|ZP_07433383.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu005]
gi|308325119|gb|EFP13970.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu002]
gi|308336656|gb|EFP25507.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu005]
Length = 144
Score = 40.4 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 36 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTRDLLLLWLAQLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 96 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 137
>gi|289759462|ref|ZP_06518840.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T85]
gi|289715026|gb|EFD79038.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis T85]
Length = 149
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 41 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 100
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 101 GGNGLRTIIDDYSRKDATRFWLNSLLVLSMLFTLMLGTYVIV 142
>gi|308372499|ref|ZP_07667393.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu004]
gi|308378270|ref|ZP_07668702.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu009]
gi|308333171|gb|EFP22022.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu004]
gi|308353052|gb|EFP41903.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu009]
Length = 171
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 63 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTRDLLLLWLAQLH 122
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 123 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 164
>gi|218295723|ref|ZP_03496519.1| succinate dehydrogenase, membrane subunit (SdhD) [Thermus aquaticus
Y51MC23]
gi|218243882|gb|EED10409.1| succinate dehydrogenase, membrane subunit (SdhD) [Thermus aquaticus
Y51MC23]
Length = 131
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 3/101 (2%)
Query: 25 FIKQRFTAIANIPFII---FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + +I + A Y+ + LS L +H
Sbjct: 24 WVFMRISGVVLVFLVIGHMWMNAILTDINKINYDYVAQRLSQTTWKIYDWLMLALGLLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +++D+I + + + L FSL
Sbjct: 84 ANGLRYVMDDWIRDPAKRFWTKVVVYSLIAFLFALGSFSLF 124
>gi|154320917|ref|XP_001559774.1| Succinate dehydrogenase-ubiquinone-cytochrome b small subunit,
mitochondrial precursor [Botryotinia fuckeliana B05.10]
gi|150851871|gb|EDN27063.1| Succinate dehydrogenase-ubiquinone-cytochrome b small subunit,
mitochondrial precursor [Botryotinia fuckeliana B05.10]
gi|254839119|gb|ACT83438.1| SdhD [Botryotinia fuckeliana]
Length = 192
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+ +P + +S + L +
Sbjct: 86 SPSHGSYHWTFERLIAVGLVPL-----------------TVAPFVSGSLNPATDALLCAA 128
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I +H +G + I DY + K + +L+ +
Sbjct: 129 ILIHSHIGFESCITDYFPSKRVPKTKAFLWWGLRGATVLVGV 170
>gi|41409540|ref|NP_962376.1| SdhD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398371|gb|AAS05992.1| SdhD [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 156
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ +A I + + + D + + ++ +H
Sbjct: 47 WLFMRFSGVALFVLAIGHLFIMLMWDDGVYRIDFNYVAQRWASPFWQLWDLALLWLAQLH 106
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLI 114
G++ II+DY + L ++ F L+L
Sbjct: 107 GGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGFTLVLG 143
>gi|194335044|ref|YP_002016904.1| succinate dehydrogenase, membrane subunit, putative
[Prosthecochloris aestuarii DSM 271]
gi|194312862|gb|ACF47257.1| succinate dehydrogenase, membrane subunit, putative
[Prosthecochloris aestuarii DSM 271]
Length = 165
Score = 40.0 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL 112
Y + + L+N +I + + H G+ ++ DY+ L+ + L
Sbjct: 90 TYSSVAARLANPLWKAIDIMLLLFALAHGLNGLNNVLVDYVQRAALRKALFAGSLAVCLF 149
Query: 113 LIIFCLFSLL 122
L + + S+L
Sbjct: 150 LSVQGIASIL 159
>gi|269795864|ref|YP_003315319.1| succinate dehydrogenase subunit D [Sanguibacter keddieii DSM 10542]
gi|269098049|gb|ACZ22485.1| succinate dehydrogenase subunit D [Sanguibacter keddieii DSM 10542]
Length = 151
Score = 40.0 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + ++ L +H
Sbjct: 30 WVFMRASGVILLVLIFGHLFVNLMVGDGVNAIDFAFVGGKWASPFWQIWDLLMLWLGMMH 89
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ I+ DY L+++ + + + +
Sbjct: 90 GTNGVRTIVNDYAERPLVRLWLKVALYTAFVAVTVLGTLVIF 131
>gi|261194400|ref|XP_002623605.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
dermatitidis SLH14081]
gi|239588619|gb|EEQ71262.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
dermatitidis SLH14081]
Length = 203
Score = 40.0 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A IP I + + + +
Sbjct: 97 SPSHGSYHWTFERAIAVALIPLTI------APFAGGS-----------LNPVMDAVFCGT 139
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I +H +G Q I DYI R K F ++ L + +
Sbjct: 140 ILMHSHIGFQSCIIDYIPGRRFPKAKKAFDWLLRVMTLTVAV 181
>gi|39974375|ref|XP_368578.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145018419|gb|EDK02698.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 171
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G H+ +R A +P + + + + ++ +
Sbjct: 68 HGHYHWTFERILAAGLVPL-----------------TVAPFAAGSFNPVMDAVLCSTLLL 110
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H LG+Q +I DY+ + + +++ + ++ +
Sbjct: 111 HSHLGLQNVITDYLPQKRVPKSRKAAMWLLNLATAVVGV 149
>gi|254839117|gb|ACT83437.1| SdhD [Botryotinia fuckeliana]
Length = 192
Score = 40.0 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+ +P + +S + L +
Sbjct: 86 SPSHGSYHWTFERLIAVGLVPL-----------------TVAPFVSGSLNPATDALLCAA 128
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I +H +G + I DY + K + +L+ +
Sbjct: 129 ILIHSHIGFESCITDYFPSKRVPKTKAFLWWGLRGATVLVGV 170
>gi|226365716|ref|YP_002783499.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus opacus
B4]
gi|226244206|dbj|BAH54554.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus opacus
B4]
Length = 156
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNV 64
R R + G ++ R T + FF+ ++ Y+ ++ N
Sbjct: 35 RTRSLYRGDPGMWSWVLHRITGV----MTFFFLFVHVLDTALVRVNPDTYDSVIETYKNP 90
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
V + ++ H G++V++ D+ Y+ L + + V++ +F
Sbjct: 91 IVGLMELALVAAVLYHALNGVRVMLVDFWSKGPQYQRLMLWVILAIWFLVMIPGAGRIF 149
>gi|118464043|ref|YP_883436.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium avium 104]
gi|254776731|ref|ZP_05218247.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium avium subsp. avium ATCC 25291]
gi|118165330|gb|ABK66227.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium avium 104]
Length = 156
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ +A I + + + D + + ++ +H
Sbjct: 47 WLFMRFSGVALFVLAIGHLFIMLMWDDGVYRIDFNYVAQRWASPFWQFWDLALLWLAQLH 106
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLI 114
G++ II+DY + L ++ F L+L
Sbjct: 107 GGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGFTLVLG 143
>gi|298526794|ref|ZP_07014203.1| SdhD [Mycobacterium tuberculosis 94_M4241A]
gi|308232415|ref|ZP_07664076.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu001]
gi|308379481|ref|ZP_07668968.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu010]
gi|308380647|ref|ZP_07669234.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu011]
gi|298496588|gb|EFI31882.1| SdhD [Mycobacterium tuberculosis 94_M4241A]
gi|308214023|gb|EFO73422.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu001]
gi|308357006|gb|EFP45857.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu010]
gi|308360862|gb|EFP49713.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu011]
gi|323718188|gb|EGB27370.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis CDC1551A]
Length = 149
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 41 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLH 100
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 101 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 142
>gi|308371309|ref|ZP_07667132.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu003]
gi|308374840|ref|ZP_07667875.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu006]
gi|308376070|ref|ZP_07668182.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu007]
gi|308377301|ref|ZP_07668477.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu008]
gi|308329340|gb|EFP18191.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu003]
gi|308340691|gb|EFP29542.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu006]
gi|308344425|gb|EFP33276.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu007]
gi|308348429|gb|EFP37280.1| succinate dehydrogenase hydrophobic membrane anchor subunit sdhD
[Mycobacterium tuberculosis SUMu008]
Length = 149
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + I + + + + + + ++ + L +H
Sbjct: 41 WLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFWQTRDLLLLWLAQLH 100
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ II+DY + L ++ F L+L + +
Sbjct: 101 GGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIV 142
>gi|119503173|ref|ZP_01625257.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2080]
gi|119460819|gb|EAW41910.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[marine gamma proteobacterium HTCC2080]
Length = 119
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
++ G ++ QR T+ I F I G Y ++ A+ L +S+
Sbjct: 9 SRSGLSDWLIQRVTS--LILLAYFICLAGILLGGVDYGAWKAMHDTTAMRIFTLLAAMSL 66
Query: 78 SVHMQLGMQVIIEDYIHYRLL 98
+ H +G+ + DY+ R+L
Sbjct: 67 AAHAWIGLWAVYTDYLTERML 87
>gi|268315783|ref|YP_003289502.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus
marinus DSM 4252]
gi|262333317|gb|ACY47114.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus
marinus DSM 4252]
Length = 136
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP-YEQIVSVLSNVAVASIMGLGTISI 77
+ G ++ R T I + ++I + D + ++++ L ++
Sbjct: 22 RTGMLAWLLHRLTGIGLVVYLILHVWGLRALTDREAFNELIATYHAPIFKIGEFLLLAAV 81
Query: 78 SVHMQLGMQVIIEDYI--HYRLLKIMFLFMNSCFVLLLIIF--CLFSLL 122
+ H G+++++ D++ H K+ + C +++ + L++++
Sbjct: 82 AYHALNGLRIVLIDFLGWHPHSKKLFWTLAVVCLLIIGVGGYPSLYAVI 130
>gi|327351974|gb|EGE80831.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 203
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A IP I + + + +
Sbjct: 97 SPSHGSYHWTFERAIAVALIPLTI------APFAGGS-----------LNPVMDAVFCGT 139
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I +H +G Q I DYI R K F ++ L + +
Sbjct: 140 ILMHSHIGFQACIIDYIPGRRFPKAKKAFDWLLRVMTLTVAV 181
>gi|254514198|ref|ZP_05126259.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[gamma proteobacterium NOR5-3]
gi|219676441|gb|EED32806.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[gamma proteobacterium NOR5-3]
Length = 102
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 27 KQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQ 86
QR TA+ + F +F Y + ++ + + L +S++ H +GM
Sbjct: 1 MQRVTAVILLAFFVFVGVQIAS--GVSYAEWTALFAQTWMKIFTLLAILSLAAHAWIGMW 58
Query: 87 VIIEDY 92
+ DY
Sbjct: 59 GVFTDY 64
>gi|323398683|ref|YP_004222758.1| succinate dehydrogenase subunit 4 [Glaucocystis nostochinearum]
gi|321401376|gb|ADW83130.1| succinate dehydrogenase subunit 4 [Glaucocystis nostochinearum]
Length = 93
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 25/95 (26%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
K G +I QR +++ +PF +F + +
Sbjct: 15 KSGWLDWIFQRVSSLFLLPFCFYF-----------------------NNLLFINHFL--F 49
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
H++LG+ I+EDYIH +K + ++L
Sbjct: 50 FHIKLGLYSILEDYIHNETIKEILSLFIRLIIILG 84
>gi|254820241|ref|ZP_05225242.1| succinate dehydrogenase hydrophobic membrane anchor protein SdhD
[Mycobacterium intracellulare ATCC 13950]
Length = 156
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ IA I + + + + + + ++ +H
Sbjct: 47 WLFMRFSGIALFVLAIGHLFIMLMWDNGVYRIDFNYVAQRWASPFWQFWDLALLWLAQLH 106
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLI 114
G++ II+DY + L ++ F L+L
Sbjct: 107 GGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGFTLVLG 143
>gi|258578271|ref|XP_002543317.1| succinate dehydrogenase cytochrome b small subunit [Uncinocarpus
reesii 1704]
gi|237903583|gb|EEP77984.1| succinate dehydrogenase cytochrome b small subunit [Uncinocarpus
reesii 1704]
Length = 494
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R AI+ IP I + + +
Sbjct: 388 SPTHGSYHWDFERLVAISLIPLTI-----------------TPFAAGSLNPVTDAILCGA 430
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
+ +H +G Q +I DY+ R + + ++ L + +
Sbjct: 431 LVLHSHIGFQALIVDYLPARRVPKTRALCVWALRLATLTVAV 472
>gi|62257889|gb|AAX77751.1| unknown protein [synthetic construct]
Length = 157
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 40 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYL 99
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 100 AMFFHAWVGIWIICGDYI-KFAWASALVMLSFVLVYIFCFFWLFAVL 145
>gi|167627194|ref|YP_001677694.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|241667757|ref|ZP_04755335.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|167597195|gb|ABZ87193.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 117
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP---YEQIVSVLS-NVAVASIMGLGTI 75
G F QR TA+ + + I + A Y+ + + ++ + +
Sbjct: 9 SGIKDFFVQRVTAVIIAVYFGYLILETLCLSHAGTLNYDSWRGLFTDSMFFRVATLMAYL 68
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI Y + ++ + + F LF++L
Sbjct: 69 AMFFHAWVGIWIICGDYIKYAW-ASALVMLSFVLIYVFCFFWLFAVL 114
>gi|50954261|ref|YP_061549.1| succinate dehydrogenase, membrane subunit [Leifsonia xyli subsp.
xyli str. CTCB07]
gi|50950743|gb|AAT88444.1| succinate dehydrogenase, membrane subunit [Leifsonia xyli subsp.
xyli str. CTCB07]
Length = 147
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + GD + + + L +H
Sbjct: 25 WVYMRASGVVLVVLIFGHLLINLVLGDGVKQIDFAFVAGKYATPFWQVWDLLMLWLALIH 84
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
GM+ ++ DY L + + V++LI+ +
Sbjct: 85 GGNGMRTLVNDYTANATLNRILKGAIAAAVVVLIVLGTLVIF 126
>gi|88856452|ref|ZP_01131110.1| succinate dehydrogenase, membrane subunit [marine actinobacterium
PHSC20C1]
gi|88814319|gb|EAR24183.1| succinate dehydrogenase, membrane subunit [marine actinobacterium
PHSC20C1]
Length = 148
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 25 FIKQRFTAIANIPFII--FFIAFFIK--YGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
+I R + + I I F+ + + L++ GL +H
Sbjct: 26 WIYMRASGVVLIVLIFGHLFVNLVAGEGVKAIDFAFVGGKLADPFWIVWDGLMLWLALLH 85
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
GM+ ++ DY ++ + L + +LII +
Sbjct: 86 GANGMRTLVNDYAINPKVRKVLLIGIAASTAILIILGTLVI 126
>gi|46199393|ref|YP_005060.1| putative membrane anchor of succinate dehydrogenase [Thermus
thermophilus HB27]
gi|55981424|ref|YP_144721.1| succinate dehydrogenase, membrane subunit SdhD [Thermus
thermophilus HB8]
gi|46197018|gb|AAS81433.1| putative membrane anchor of succinate dehydrogenase [Thermus
thermophilus HB27]
gi|55772837|dbj|BAD71278.1| succinate dehydrogenase, membrane subunit (SdhD) [Thermus
thermophilus HB8]
Length = 131
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Query: 25 FIKQRFTAIANIPFII---FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + +I + A + Y+ + LS L +H
Sbjct: 24 WVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVAKRLSQTTWKVYDWLILALALLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMN---SCFVLLLIIFCLF 119
G++ +++D++ + + + F+ L LF
Sbjct: 84 GNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGSLSLF 124
>gi|312140769|ref|YP_004008105.1| succinate dehydrogenase cytochrome b subunit sdhc [Rhodococcus equi
103S]
gi|311890108|emb|CBH49426.1| succinate dehydrogenase cytochrome b subunit SdhC [Rhodococcus equi
103S]
Length = 140
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVAS 68
R R + G ++ R T +A F+ + ++ Y++++ N V
Sbjct: 19 RTRSLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDRVIETYKNPLVGL 78
Query: 69 IMGLGTISISVHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + H G++V++ D+ Y+ + + + V++ +F
Sbjct: 79 MELALVAMVLYHALNGLRVMLVDFWSKGPQYQRVMLWVIIAIWFVVMIPGAGRIF 133
>gi|184201437|ref|YP_001855644.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Kocuria rhizophila DC2201]
gi|183581667|dbj|BAG30138.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Kocuria rhizophila DC2201]
Length = 161
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQ----IVSVLSNVAVASIMGLGTISISVH 80
++ R + I + + + + G+ + + +N + +H
Sbjct: 39 WLFMRMSGIVLVVLVFGHLFVNLMVGEGVHAVDFGFVGGKWANPFWQVWDLVMLWLAMLH 98
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLF 119
GM+ II+DY + LF+ S FV+LL +F
Sbjct: 99 GTNGMRTIIDDYAGRNTTRFWLKVFLFVASAFVILLGTMVIF 140
>gi|154245910|ref|YP_001416868.1| succinate dehydrogenase cytochrome b556 subunit [Xanthobacter
autotrophicus Py2]
gi|154159995|gb|ABS67211.1| Succinate dehydrogenase cytochrome b556 subunit [Xanthobacter
autotrophicus Py2]
Length = 133
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAP--YEQIVSVLSNVAVASIMGLGTISISVHMQL 83
I R T + + + + +P +E SV + ++ T ++ H
Sbjct: 29 IVHRITGVGLYFGTAILVWWLLAAATSPSAFESFRSVAGSPIGLIVLFGYTWALLHHALG 88
Query: 84 GMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
G + I D+IH K L + + + + ++ +A+ G
Sbjct: 89 GARHFIWDFIHGFGPKERMLLAQATLAGSVALTVILWVVGLAVKG 133
>gi|296128871|ref|YP_003636121.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Cellulomonas flavigena DSM 20109]
gi|296020686|gb|ADG73922.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Cellulomonas flavigena DSM 20109]
Length = 152
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + G+ + + ++ L +H
Sbjct: 31 WMFMRGSGVVLVVLIFGHLFVNLMVGEGISAIDFGFVAGKWASPFWQVWDLLMLWLAMLH 90
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY +++ L+I+ +
Sbjct: 91 GTNGVRTIINDYAEKDTTRLVLKLALYVATTLVIVLGTLVIF 132
>gi|213421919|ref|ZP_03354985.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 83
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%)
Query: 42 FIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM 101
+ FF G+ +E S+ L SI +H +GM ++ DY+ ++++
Sbjct: 1 MVGFFATSGELTFEAWTGFFSSAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLAVRLI 60
Query: 102 FLFMNSCFVLLLIIFCLFSL 121
+ +++ +I+ +
Sbjct: 61 LQLVIVVALVVYVIYGFVVV 80
>gi|325675591|ref|ZP_08155275.1| succinate dehydrogenase cytochrome b558 subunit [Rhodococcus equi
ATCC 33707]
gi|325553562|gb|EGD23240.1| succinate dehydrogenase cytochrome b558 subunit [Rhodococcus equi
ATCC 33707]
Length = 134
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVAS 68
R R + G ++ R T +A F+ + ++ Y++++ N V
Sbjct: 13 RTRSLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDRVIETYKNPLVGL 72
Query: 69 IMGLGTISISVHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + H G++V++ D+ Y+ + + + V++ +F
Sbjct: 73 MELALVAMVLYHALNGLRVMLVDFWSKGPQYQRVMLWVIIAIWFVVMIPGAGRIF 127
>gi|290957988|ref|YP_003489170.1| succinate dehydrogenase membrane subunit [Streptomyces scabiei
87.22]
gi|260647514|emb|CBG70619.1| putative succinate dehydrogenase membrane subunit [Streptomyces
scabiei 87.22]
Length = 163
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 36/102 (35%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + +I + + + + ++ + L +H
Sbjct: 55 WLFMRLSGVVLVVLVIGHLIIQLVLDGGVSKIGFAFVAGRWASPFWQTWDLLMLWLAMLH 114
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 115 GANGLRTVINDYAERPNTRLWLKGLLYTATVFTILLGTLVIF 156
>gi|46107720|ref|XP_380919.1| hypothetical protein FG00743.1 [Gibberella zeae PH-1]
Length = 197
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 17/102 (16%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S+ G+ H+ +RF A +P + + ++ +
Sbjct: 79 SSTHGSYHWTFERFLAAGLVPL-----------------TVAPFAAGSLNPTLDAILCSV 121
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
+ +H +G Q ++ DYI R + N + ++ +
Sbjct: 122 LLLHSHMGFQQVVIDYIPSRTYPGLRKTFNWLLNIATVLVGV 163
>gi|302927670|ref|XP_003054545.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735486|gb|EEU48832.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 177
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
SA G+ H+ +R A +P I AP+ S ++ +
Sbjct: 71 SAAHGSYHWSFERLLAAGLVPLTI-----------APFA------SGSLNPTLDAILCSV 113
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
+ +H +G Q ++ DYI R L+ +F ++ + +++ +
Sbjct: 114 LLLHSHMGFQQVVIDYIPKRTYAGLRKIFDWLLNIATVIVGV 155
>gi|254876301|ref|ZP_05249011.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842322|gb|EET20736.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 122
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAP---YEQIVSVLS-NVAVASIMGLGTI 75
G F QR TA+ + + I + A Y+ + + ++ + +
Sbjct: 14 SGIKDFFVQRVTAVIIAVYFGYLILETLCLSHAGTLNYDSWRGLFTDSMFFRVATLMAYL 73
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI Y + ++ + + F LF++L
Sbjct: 74 AMFFHAWVGIWIICGDYIKYAW-ASALVMLSFVLIYVFCFFWLFAVL 119
>gi|88660666|gb|ABD24440.1| succinate dehydrogenase subunit 4 [Populus trichocarpa]
Length = 108
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 22 QRITAALLLPLIII------------YKKVSSTF----------LLNLSLFWHINEGIEE 59
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ DY+H + + L F+L++
Sbjct: 60 IMADYVHQEMTRNWILVYLRLFLLIV 85
>gi|254393800|ref|ZP_05008914.1| succinate dehydrogenase membrane subunit [Streptomyces clavuligerus
ATCC 27064]
gi|294814601|ref|ZP_06773244.1| Succinate dehydrogenase membrane subunit [Streptomyces clavuligerus
ATCC 27064]
gi|326442989|ref|ZP_08217723.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces clavuligerus ATCC 27064]
gi|197707401|gb|EDY53213.1| succinate dehydrogenase membrane subunit [Streptomyces clavuligerus
ATCC 27064]
gi|294327200|gb|EFG08843.1| Succinate dehydrogenase membrane subunit [Streptomyces clavuligerus
ATCC 27064]
Length = 158
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + +I + + + + ++ L +H
Sbjct: 50 WLFMRLSGVVLVVLVIGHLIIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 109
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 110 GANGLRTVINDYAERPNTRLWLKGLLYTATVFTILLGTLVIF 151
>gi|300782782|ref|YP_003763073.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Amycolatopsis mediterranei U32]
gi|299792296|gb|ADJ42671.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Amycolatopsis mediterranei U32]
Length = 137
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + ++ L +H
Sbjct: 27 WLFMRISGLVLVILVLGHLLIMNILDGGVHRINWGFVAGRWASPFWQFWDLLMLWLAEIH 86
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II+DY + + ++L++ +
Sbjct: 87 GGNGLRTIIDDYARKDSTRFWLKILLYVSMVLILAVGTMVIF 128
>gi|32491171|ref|NP_871425.1| hypothetical protein WGLp422 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166378|dbj|BAC24568.1| sdhD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 113
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 54 YEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL 112
YE + + L +SI++H +G+ II DYI L++ + +
Sbjct: 45 YELWREFFNKSLIKIFTILTFMSIAIHSWIGLWQIITDYIKSESLRLKLEIVIFLILFA 103
>gi|320333906|ref|YP_004170617.1| succinate dehydrogenase cytochrome subunit B [Deinococcus
maricopensis DSM 21211]
gi|319755195|gb|ADV66952.1| succinate dehydrogenase cytochrome b subunit [Deinococcus
maricopensis DSM 21211]
Length = 127
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 25 FIKQRFTAIANIPFII---FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+I R + + + ++ + + DA ++ +V+ L+ A L + ++H
Sbjct: 23 WIFMRISGVLLVFLVLGHVYMTFIQVSESDATFDAVVNKLAQPAWKFYDFLILLLATLHG 82
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
G + IEDYI R + V ++ +F+L I +
Sbjct: 83 VNGARYSIEDYIRSRPNRFWVK-----GVFYTVVASIFTLGTIGL 122
>gi|289804527|ref|ZP_06535156.1| succinate dehydrogenase cytochrome b556 small membrane subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 84
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++G FI R TAI +II+ + FF G+ +E S+ L +
Sbjct: 10 RNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTFEAWTGFFSSAFTKVFTLL---ASF 66
Query: 79 VHM 81
H+
Sbjct: 67 FHL 69
>gi|302524159|ref|ZP_07276501.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces sp. AA4]
gi|302433054|gb|EFL04870.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces sp. AA4]
Length = 142
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + +A I ++ + + + ++ +H
Sbjct: 32 WLFMRISGLALIILVLGHLFIMNILDGGVHRINWGFVAGRWASPFWQFWDLAMLWLAEIH 91
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II+DY + + + L++ +
Sbjct: 92 GGNGLRTIIDDYARKDSTRFWLKILLYVSMALILAVGTMVIF 133
>gi|255714765|ref|XP_002553664.1| KLTH0E04180p [Lachancea thermotolerans]
gi|238935046|emb|CAR23227.1| KLTH0E04180p [Lachancea thermotolerans]
Length = 189
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 15/102 (14%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R TA+ +P + + + S + + + +
Sbjct: 71 HGSYHWDYERITAVMLVPLTLVPMYGALS-------------SGTLYPLLDAMLCSVLLI 117
Query: 80 HMQLGMQVIIEDYIHYRLLKIM--FLFMNSCFVLLLIIFCLF 119
H QLG+ I DYI R I + ++ ++
Sbjct: 118 HSQLGITSCIIDYIPKRKFGIWHKLAMGMLYTGSAVGLYGVY 159
>gi|88703465|ref|ZP_01101181.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Congregibacter litoralis KT71]
gi|88702179|gb|EAQ99282.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Congregibacter litoralis KT71]
Length = 103
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
+ QR TA+ F + Y + ++ S + L +S++ H +GM
Sbjct: 1 MVQRVTAVIL--LAFFALVGVKLAAGISYAEWSALFSQTWMKIFTMLAILSLAAHAWIGM 58
Query: 86 QVIIEDY 92
+ DY
Sbjct: 59 WGVFTDY 65
>gi|239612811|gb|EEQ89798.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
dermatitidis ER-3]
Length = 197
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A IP I + + + +
Sbjct: 91 SPSHGSYHWTFERAIAVALIPLTI------APFAGGS-----------LNPVMDAVFCGT 133
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I +H +G Q I DYI R K F ++ L + +
Sbjct: 134 ILMHSHIGFQACIIDYIPGRRFPKAKKAFDWLLRVMTLTVAV 175
>gi|88608060|ref|YP_505949.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Neorickettsia sennetsu str. Miyayama]
gi|88600229|gb|ABD45697.1| putative succinate dehydrogenase, hydrophobic membrane anchor
protein [Neorickettsia sennetsu str. Miyayama]
Length = 109
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLG 84
++ QR TA+ IF + + + + V + + + H LG
Sbjct: 8 WLAQRITALLLFLLFIFLLFSLRSSKWIFPFDVEYLSCHWGVLLVFAMFVLIAQCHALLG 67
Query: 85 MQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+ VIIEDYI +L+ + + +N F + +F ++
Sbjct: 68 LNVIIEDYIASSILRKVLVSLNIIF-VGSTLFAFVAVF 104
>gi|326381948|ref|ZP_08203641.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia
neofelifaecis NRRL B-59395]
gi|326199374|gb|EGD56555.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia
neofelifaecis NRRL B-59395]
Length = 112
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R T ++ F+ + I+ + Y +I+ + + + H
Sbjct: 4 WVLHRITGVSIFFFLFVHVLDTAVIRVNENSYTEIIETYKTPLIGLMEIGLVFCVLYHAL 63
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
G++VI+ D+ + K + + + I+F ++
Sbjct: 64 NGLRVILVDFW-GKGAKYQRQMLWTILTVFAIVFIAAAV 101
>gi|308176511|ref|YP_003915917.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis
Re117]
gi|307743974|emb|CBT74946.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis
Re117]
Length = 126
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+G ++ R T + +++ + ++ Y+ I+S +A +
Sbjct: 13 HEGMWSWVGHRVTGVVIFLYLLVHVLDTAMVRVDAGAYDAIISTYQTPWMALGETGLVAA 72
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL--LKIAILG 128
I H G+++I+ D+ + K + +L +I+F F++ L IA G
Sbjct: 73 ILFHAFNGLRLILVDF-WKQGTKYQRQMLWGVLILWVIVFAGFAIRHLSIAFGG 125
>gi|308176510|ref|YP_003915916.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis
Re117]
gi|307743973|emb|CBT74945.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis
Re117]
Length = 147
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYG----DAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + G + + ++ +H
Sbjct: 32 WLFMRLSGVVLVILIFGHLFSNLMVGEGISGIGFGFVAGKWASPLWQFWDLAMLWLAMLH 91
Query: 81 MQLGMQVIIEDYIHYRLLKIMF---LFMNSCFVLLLIIFCLF 119
G++ II DY + L++ + F+++L +F
Sbjct: 92 GTNGVRTIINDYAEKHATRAWLKGILYVATIFIIVLGSLVIF 133
>gi|183981224|ref|YP_001849515.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
[Mycobacterium marinum M]
gi|183174550|gb|ACC39660.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
[Mycobacterium marinum M]
Length = 155
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + + + + + + + + S+ + L +H
Sbjct: 47 WLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 106
Query: 81 MQLGMQVIIEDYIHYRLLKIMF-LFMNSCFVLLLIIFC 117
G++VII+DY + + V L +
Sbjct: 107 GGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVFTLALGS 144
>gi|319762654|ref|YP_004126591.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alicycliphilus denitrificans BC]
gi|330824795|ref|YP_004388098.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alicycliphilus denitrificans K601]
gi|317117215|gb|ADU99703.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alicycliphilus denitrificans BC]
gi|329310167|gb|AEB84582.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Alicycliphilus denitrificans K601]
Length = 121
Score = 38.1 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTIS 76
A G F+ QR TA+ F + + + Y+ + + + ++ ++
Sbjct: 14 AHYGWRDFLVQRITAVLIGVFTLLVLCKLLFTSGPIGYDTWAGIFAPQWMKALTFSVIVA 73
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFM 105
+ H +G+ + DY L+++ +
Sbjct: 74 VIWHAWVGVCSVWYDYAKPAGLRLVLQAL 102
>gi|118617053|ref|YP_905385.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
[Mycobacterium ulcerans Agy99]
gi|118569163|gb|ABL03914.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
[Mycobacterium ulcerans Agy99]
Length = 140
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + + + + + + + + S+ + L +H
Sbjct: 32 WLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLH 91
Query: 81 MQLGMQVIIEDYIHYRLLKIMF-LFMNSCFVLLLIIFC 117
G++VII+DY + + V L +
Sbjct: 92 GGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVFTLALGS 129
>gi|332671370|ref|YP_004454378.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Cellulomonas fimi ATCC 484]
gi|332340408|gb|AEE46991.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Cellulomonas fimi ATCC 484]
Length = 152
Score = 37.7 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 25 FIKQRFTAIANIPFII--FFIAFFIK--YGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I F+ + + ++ L +H
Sbjct: 31 WVFMRASGVLLVVLIFGHLFVNLVAGEGVTAIDFGFVAGKWASPFWQVWDLLMLWLAMIH 90
Query: 81 MQLGMQVIIEDYIHYRLLKIMF 102
GM+ I+ DY +++
Sbjct: 91 GTNGMRTIVNDYAEKDTTRLVL 112
>gi|111023211|ref|YP_706183.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Rhodococcus jostii RHA1]
gi|110822741|gb|ABG98025.1| probable succinate dehydrogenase hydrophobic membrane anchor
protein [Rhodococcus jostii RHA1]
Length = 134
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAF---FIKYGDAPYEQIVSVLSNVAVA 67
R R + G ++ R T + F +F ++ Y+ ++ N V
Sbjct: 13 RTRSLYRGDPGMWSWVLHRITGV-MTFFFLFVHVLDTALVRVNPDTYDSVIETYKNPIVG 71
Query: 68 SIMGLGTISISVHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ ++ H G++V++ D+ Y+ L + + V++ +F
Sbjct: 72 LMELALVAAVLYHALNGVRVMLVDFWSKGPQYQRLMLWVILAIWFLVMIPGAGRIF 127
>gi|226305532|ref|YP_002765492.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus
erythropolis PR4]
gi|229489604|ref|ZP_04383467.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodococcus
erythropolis SK121]
gi|226184649|dbj|BAH32753.1| probable succinate dehydrogenase cytochrome b subunit [Rhodococcus
erythropolis PR4]
gi|229323701|gb|EEN89459.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodococcus
erythropolis SK121]
Length = 142
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVAS 68
R R + G ++ R T +A F+ + ++ Y+ ++ N V
Sbjct: 21 RTRSLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDAVIDTYKNPLVGL 80
Query: 69 IMGLGTISISVHMQLGMQVIIEDY 92
+ + H G++V++ D+
Sbjct: 81 MEIGLVGVVLYHALNGVRVMLVDF 104
>gi|167522633|ref|XP_001745654.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776003|gb|EDQ89625.1| predicted protein [Monosiga brevicollis MX1]
Length = 170
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 20/87 (22%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G H+ +R ++A +P I + A GL I +
Sbjct: 73 HGLSHWKVERLLSVALVPLIP------------------AAFIAPGPAVDYGLAVIVP-I 113
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMN 106
H LGM II DY+ LK +N
Sbjct: 114 HNYLGMDAIITDYV-AHSLKGAVKGLN 139
>gi|256832058|ref|YP_003160785.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Jonesia denitrificans DSM 20603]
gi|256685589|gb|ACV08482.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Jonesia denitrificans DSM 20603]
Length = 146
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + G+ + + ++ + L +H
Sbjct: 27 WLFMRGSGVILVVLIFGHLFVNLMVGEGVSRIDFAFVGGKWTSPFWQTWDLLMLWLAMIH 86
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + +++ +L ++ +
Sbjct: 87 GTNGVRTIINDYSERHITRLILKLALYSAFILTVVLGTLVIF 128
>gi|320591256|gb|EFX03695.1| succinate dehydrogenase subunit [Grosmannia clavigera kw1407]
Length = 179
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 20/101 (19%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G+ H+ +R A +P + AP+ + + + ++
Sbjct: 74 ASHGSYHWTFERLVAAGLVPLTL-----------APFA------AGSLNPTTDAILCATV 116
Query: 78 SVHMQLGMQVIIEDYIH---YRLLKIMFLFMNSCFVLLLII 115
VH +G+ I+ DY+ Y L+ + + L+ +
Sbjct: 117 LVHTHMGLSTILVDYVPTWGYPKLRKGLTWGLNAITALVGL 157
>gi|167009436|ref|ZP_02274367.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica FSC200]
gi|290953666|ref|ZP_06558287.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica URFT1]
gi|295312983|ref|ZP_06803692.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica URFT1]
Length = 117
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 9 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMVYL 68
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 69 AMFFHAWVGIWIICGDYI-KFAWAFALVMLSFVLVYIFCFFWLFAVL 114
>gi|171695202|ref|XP_001912525.1| hypothetical protein [Podospora anserina S mat+]
gi|170947843|emb|CAP60007.1| unnamed protein product [Podospora anserina S mat+]
Length = 165
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 20/100 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ R A + IP + + ++ + ++ +
Sbjct: 62 HGSYHWTFDRLVAASLIPL-----------------TVAPFAAGSLNPTMDAVLCATLLI 104
Query: 80 HMQLGMQVIIEDYIH---YRLLKIMFLFMNSCFVLLLIIF 116
H G Q II DY+ + ++ + +++ +
Sbjct: 105 HSHTGFQNIIVDYVPQYRTPRARKAAIWGLNAATVVVGLA 144
>gi|120402595|ref|YP_952424.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium
vanbaalenii PYR-1]
gi|119955413|gb|ABM12418.1| succinate dehydrogenase subunit C [Mycobacterium vanbaalenii PYR-1]
Length = 142
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 40/119 (33%), Gaps = 5/119 (4%)
Query: 6 RSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSN 63
RS R R + G ++ R + F+ + ++ Y +++
Sbjct: 15 RSEPSRRRTIYRGDPGMWSWVLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKT 74
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDYI---HYRLLKIMFLFMNSCFVLLLIIFCLF 119
V + ++ H G+++I+ D+ K++++ + + +
Sbjct: 75 PIVGLMEIGLVAAVLYHALNGIRIILIDFWSEGPRHQRKMLWVIAGVFIAVFIAALGVI 133
>gi|238785855|ref|ZP_04629823.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia bercovieri ATCC 43970]
gi|238713225|gb|EEQ05269.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia bercovieri ATCC 43970]
Length = 79
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 46 FIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFM 105
I D YE ++ L +SI VH +G+ ++ DYI ++++
Sbjct: 1 MIIVPDITYEIWRGFFASHITKVFTLLTLLSILVHAWIGLWQVLTDYIKPLAIRLVLQLA 60
Query: 106 N 106
Sbjct: 61 V 61
>gi|87133588|gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoides]
gi|87133590|gb|ABD24437.1| succinate dehydrogenase subunit 4 [Populus nigra]
gi|87133592|gb|ABD24438.1| succinate dehydrogenase subunit 4 [Populus tremuloides]
Length = 106
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 22 QRITAALLLPLIII------------YKKVSSTF----------LPNLSLFWHINEGIEE 59
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ DY+H + + L F+L++
Sbjct: 60 IMADYVHQEMTRNWILVYLRLFLLIV 85
>gi|224077048|ref|XP_002305108.1| predicted protein [Populus trichocarpa]
gi|222848072|gb|EEE85619.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 22/88 (25%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
+ QR TA IP II Y+++ S+ + H+ G+
Sbjct: 199 LLQRITAALLIPLIII------------YKKVSSIF---LPNLFL-------FRHINEGI 236
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
+ I+ DY+H + + L F+L++
Sbjct: 237 KEIMADYVHQEMTRNWILVYLRLFLLIV 264
>gi|332184746|gb|AEE27000.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella cf. novicida 3523]
Length = 117
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 9 SGIKDFFVQRVTAVIIAVYFGYLIVEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYL 68
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 69 AMFFHAWVGIWIICGDYI-KFAWASALVMLSFVLVYVFCFFWLFAVL 114
>gi|302524160|ref|ZP_07276502.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp.
AA4]
gi|302433055|gb|EFL04871.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp.
AA4]
Length = 149
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + FF+ ++ Y+Q++ V + ++
Sbjct: 38 WVLHRITGV----LTFFFLFVHVLDTALVRVSPNTYDQVIETYKTPIVNLLEVGLVGAVL 93
Query: 79 VHMQLGMQVIIEDY 92
H G++V++ D+
Sbjct: 94 YHALNGLRVLLVDF 107
>gi|240169115|ref|ZP_04747774.1| succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
[Mycobacterium kansasii ATCC 12478]
Length = 159
Score = 37.3 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ RF+ + + + + + + + + + ++ + L +H
Sbjct: 51 WLFMRFSGVVLVFLALGHLFIGLMWDNGVYRIDFNYVAQRWNSPFWQTWDLLLLWLAQLH 110
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++VII+DY + L ++ F L+L + L
Sbjct: 111 GGNGLRVIIDDYSRKESTRFWLNSLLAVSMTFTLVLGSYVLL 152
>gi|126642743|ref|YP_001085727.1| succinate dehydrogenase hydrophobic subunit [Acinetobacter
baumannii ATCC 17978]
Length = 99
Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 35 NIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIH 94
+ + + + G Y+Q + + + L +S+ H +GM + DY+
Sbjct: 3 LAAYTVVLFGWILCKGGFDYQQWAGFMMTLPMKIFSLLAILSLIAHAWIGMWQVFTDYVT 62
Query: 95 ----YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
K + L + + ++ + ++ ++ +
Sbjct: 63 TRQMGPSAKGLRLVLTTAVIIAVFVYAIWGI 93
>gi|186920146|ref|YP_001874800.1| hypothetical protein HAM_072 [Hemiselmis andersenii]
gi|186461092|gb|ACC78254.1| hypothetical protein HAM_072 [Hemiselmis andersenii]
Length = 91
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 72 LGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
L I I H +LG + +IEDY H K++ + ++ L+ F ++
Sbjct: 40 LVLIVIVYHFKLGFETLIEDYTHNHTFKVLGFILLRLVIIYLVKFIFLLII 90
>gi|295838572|ref|ZP_06825505.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Streptomyces sp. SPB74]
gi|197697802|gb|EDY44735.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Streptomyces sp. SPB74]
Length = 162
Score = 37.3 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 43 IAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM- 101
+ + + ++ L +H G++ +I DY ++
Sbjct: 76 LFLDGGVQKIGFAFVAGRWASPFWQGWDLLMLWLAMLHGANGLRTVINDYAERPATRMWL 135
Query: 102 --FLFMNSCFVLLLIIFCLF 119
L+ + F +LL +F
Sbjct: 136 KGLLWAATLFTVLLGTLVIF 155
>gi|119964495|ref|YP_947030.1| succinate dehydrogenase, membrane subunit (sdhD) [Arthrobacter
aurescens TC1]
gi|119951354|gb|ABM10265.1| putative succinate dehydrogenase, membrane subunit (sdhD)
[Arthrobacter aurescens TC1]
Length = 158
Score = 37.3 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ R + I + I + + G+ + ++ +++ H
Sbjct: 36 WLFMRLSGIVLVVLIFGHLFVNLLVGEGIHAIDFGFVAGKWADPFWQFWDLAMLWLAMLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + + L++II +
Sbjct: 96 GTNGVRTIINDYAEKDSTRFWLKMVLYAATLVIIILGTLVIF 137
>gi|156843316|ref|XP_001644726.1| hypothetical protein Kpol_1024p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156115375|gb|EDO16868.1| hypothetical protein Kpol_1024p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 173
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 14/77 (18%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A++ IP + I S ++I + ++
Sbjct: 55 HGSYHWDFERIVAVSIIPLVT------IPTLGLS--------SMPLHSTIDAVLCVTAMS 100
Query: 80 HMQLGMQVIIEDYIHYR 96
H L Q I DY+ R
Sbjct: 101 HFFLEFQSCITDYVQKR 117
>gi|118481641|gb|ABK92762.1| unknown [Populus trichocarpa]
Length = 273
Score = 37.0 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 22/88 (25%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGM 85
+ QR TA IP II Y+++ S+ + H+ G+
Sbjct: 199 LLQRITAALLIPLIII------------YKKVSSIF---LPNLFL-------FRHINEGI 236
Query: 86 QVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
+ I+ DY+H + + L F+L++
Sbjct: 237 KEIMADYVHQEMTRNWILVYLRLFLLIV 264
>gi|116669691|ref|YP_830624.1| succinate dehydrogenase subunit D [Arthrobacter sp. FB24]
gi|116609800|gb|ABK02524.1| succinate dehydrogenase subunit D [Arthrobacter sp. FB24]
Length = 164
Score = 37.0 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 38/118 (32%), Gaps = 6/118 (5%)
Query: 11 RVRGMGSAKDGTG--HFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVAS 68
+ R G++K ++ R + + + I + + G+ + ++
Sbjct: 25 KYRRSGASKGNFEMAAWLFMRLSGVVLVVLIFGHLFVNLMVGEGIHAIDFGFVAGKWADP 84
Query: 69 IMGLGTISISV----HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+++ H G++ II DY + + ++II +
Sbjct: 85 FWQFWDLAMLWLAMLHGTNGVRTIINDYAEKDSTRFWLKIVLYAATAVIIILGTLVIF 142
>gi|58257393|gb|AAW69318.1| succinate dehydrogenase membrane anchor subunit-like protein
[Magnaporthe grisea]
Length = 171
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 32/99 (32%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G H+ +R A +P + + + + ++
Sbjct: 68 HGHYHWTFERILAAGLVPL-----------------TVAPFAAGSFNPVMDAVLCSTLLR 110
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H G+Q +I DY+ + + +++ + ++ +
Sbjct: 111 HSHRGLQNVITDYLPQKRVPKSRKAAMWLLNLATAVVGV 149
>gi|302415797|ref|XP_003005730.1| succinate dehydrogenase membrane anchor subunit [Verticillium
albo-atrum VaMs.102]
gi|261355146|gb|EEY17574.1| succinate dehydrogenase membrane anchor subunit [Verticillium
albo-atrum VaMs.102]
Length = 181
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 17/77 (22%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A +P + + ++ + + +
Sbjct: 78 HGSYHWTFERLLAAGLVPLTL-----------------TPFAAGSLNPTLDAILCAGLIL 120
Query: 80 HMQLGMQVIIEDYIHYR 96
H LG Q II DY+ +
Sbjct: 121 HSHLGFQAIIVDYVPAK 137
>gi|262201721|ref|YP_003272929.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia
bronchialis DSM 43247]
gi|262085068|gb|ACY21036.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia
bronchialis DSM 43247]
Length = 139
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVAS 68
R R + G ++ R T + F+ + I+ Y++I++ V
Sbjct: 14 RRRSLYRGNPGMWSWVLHRITGVTIFFFLFVHVLDTAVIRVDPNQYDEIIATYKTPIVGL 73
Query: 69 IMGLGTISISVHMQLGMQVIIEDYIHY--RLLKIMFLFMNSCFVLLLIIFCL 118
+ + H G+++I+ D+ + + M + + FV++ +
Sbjct: 74 MEIGLVACVLFHAFNGLRIILIDFWSKGPKYQRQMLWAILTLFVIVFGAATV 125
>gi|221632361|ref|YP_002521582.1| succinate dehydrogenase, membrane subunit [Thermomicrobium roseum
DSM 5159]
gi|221157184|gb|ACM06311.1| succinate dehydrogenase, membrane subunit [Thermomicrobium roseum
DSM 5159]
Length = 137
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIAF---FIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+ R + + I + + + ++ + ++ L H
Sbjct: 22 WYYFRISGLLLILLAVGHVVIMHVVNTVDEIDWQFVADRWNSPFWRVYDWLLLFLALTHG 81
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G ++ I+DY+ ++ + LL ++ +++
Sbjct: 82 LNGARLAIDDYVRPHGWRVFAHSVLWTLALLFLVIGSIAIV 122
>gi|254393799|ref|ZP_05008913.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294814602|ref|ZP_06773245.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197707400|gb|EDY53212.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294327201|gb|EFG08844.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
clavuligerus ATCC 27064]
Length = 126
Score = 37.0 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+V VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEDYDKVVAVYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
++ H G++VI D+
Sbjct: 66 LVAAVLFHALNGLRVIAVDF 85
>gi|19032302|dbj|BAB85638.1| succinate dehydrogenase subunit 4 [Pisum sativum]
gi|19032304|dbj|BAB85639.1| succinate dehydrogenase subunit 4 [Pisum sativum]
Length = 223
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 21/49 (42%)
Query: 65 AVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
A + + H+ G++ I+ DY+H+ + + F+++
Sbjct: 164 PNAYSLLAANFFVFWHINAGIEEILADYVHHEMTREFIFISLRLFLIIA 212
>gi|29829938|ref|NP_824572.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
avermitilis MA-4680]
gi|29607048|dbj|BAC71107.1| putative succinate dehydrogenase cytochrome b-556 subunit
(complex II) [Streptomyces avermitilis MA-4680]
Length = 126
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++VS VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEDYDKVVSTYKTPIVAVLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|148272151|ref|YP_001221712.1| putative succinate dehydrogenase, hydrophobic membrane subunit
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|147830081|emb|CAN01010.1| putative succinate dehydrogenase, hydrophobic membrane subunit
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 154
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFI----KYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + + + LS+ +H
Sbjct: 32 WMYMRASGVVLVVLIFGHLYVNLIQGEGIKAIDFAFVGGKLSDPFWKVWDIALLWLAVIH 91
Query: 81 MQLGMQVIIEDYIHYRLLKIMF 102
GM+ ++ DY + +
Sbjct: 92 GANGMRTLVNDYAASPRTRTIL 113
>gi|296419265|ref|XP_002839236.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635249|emb|CAZ83427.1| unnamed protein product [Tuber melanosporum]
Length = 194
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 20/101 (19%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G+ H+ +R ++A IP + + N +I+G +
Sbjct: 89 AAHGSYHWSFERLISVALIPLTV--------------APFAAGSINPVTDAILGATIV-- 132
Query: 78 SVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
+H +G + +I DYI +R L+ ++ +L+++
Sbjct: 133 -IHSHIGFESMIVDYIPHRRYPALRKGAMWALKGATMLVLV 172
>gi|254579439|ref|XP_002495705.1| ZYRO0C01056p [Zygosaccharomyces rouxii]
gi|238938596|emb|CAR26772.1| ZYRO0C01056p [Zygosaccharomyces rouxii]
Length = 185
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 14/105 (13%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
+G+ H+ +R A++ +P + + I + + + +
Sbjct: 68 EGSFHWDYERIAAVSLLPLVTVPLYIGIT-------------GGIVPPILDASLCSILLI 114
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKI 124
H+Q G+ I DYI R +I L+ + ++
Sbjct: 115 HVQYGLTSCIIDYIPMRKFRIWHNLAMYLL-YGGTAVGLYGVYQL 158
>gi|89257050|ref|YP_514412.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica LVS]
gi|115315405|ref|YP_764128.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica
OSU18]
gi|169656757|ref|YP_001429324.2| hypothetical protein FTA_1893 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368291|ref|ZP_04984310.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica 257]
gi|254369887|ref|ZP_04985896.1| hypothetical protein FTAG_01648 [Francisella tularensis subsp.
holarctica FSC022]
gi|89144881|emb|CAJ80226.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica LVS]
gi|115130304|gb|ABI83491.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica
OSU18]
gi|134254100|gb|EBA53194.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. holarctica 257]
gi|157122857|gb|EDO66974.1| hypothetical protein FTAG_01648 [Francisella tularensis subsp.
holarctica FSC022]
gi|164551825|gb|ABU62368.2| putative membrane protein [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 122
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 14 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMVYL 73
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 74 AMFFHAWVGIWIICGDYI-KFAWAFALVMLSFVLVYIFCFFWLFAVL 119
>gi|316996022|dbj|BAD83522.2| hypothetical protein [Nicotiana tabacum]
Length = 125
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 25/99 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 45 QRITAAFLLPLIII------------YKKVSSTF----------LLNLSLFWHINEGIEE 82
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL---IIFCLFSLLK 123
I+ DY+H + + L F+L++ + L S LK
Sbjct: 83 IMADYVHQEMTRNWILVYLRLFLLIVIKDVFLSLVSFLK 121
>gi|87133594|gb|ABD24439.1| succinate dehydrogenase subunit 4 [Salix gilgiana]
Length = 100
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 22 QRITAALLLPLIII------------YKKVSSTF----------LPNLSLFWHINEGIEE 59
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ DY+H + + L F+L++
Sbjct: 60 IMADYVHQEMTRNWILVYLRLFLLIV 85
>gi|269955789|ref|YP_003325578.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Xylanimonas cellulosilytica DSM 15894]
gi|269304470|gb|ACZ30020.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Xylanimonas cellulosilytica DSM 15894]
Length = 155
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
+I R + + + + + + G+ + + + L +H
Sbjct: 31 WIFMRASGVLLLVLVFGHLFVNLMTGEGVHSIDFGFVGGKWATPFWQIWDLLMLWLAMIH 90
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ I+ DY +++ + +++++ +
Sbjct: 91 GTNGVRTIVNDYASKDATRLVLKSLLYLAFVIVVVLGTLVIF 132
>gi|229821432|ref|YP_002882958.1| succinate dehydrogenase cytochrome b556 subunit [Beutenbergia
cavernae DSM 12333]
gi|229567345|gb|ACQ81196.1| succinate dehydrogenase cytochrome b556 subunit [Beutenbergia
cavernae DSM 12333]
Length = 152
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDA-PYEQIVSVLSNVAVASIMGLGTISISVH 80
+I R + + I I +F A + + ++ L +H
Sbjct: 31 WIFMRASGVLLIVLIFGHLFVNLLVGDGVGAIDFAFVGGKWASPFWQVWDLLMLWLAMIH 90
Query: 81 MQLGMQVIIEDYIHYRLLKIMF 102
G++ II DY + +++
Sbjct: 91 GTNGVRTIINDYAERDVTRVVL 112
>gi|238797744|ref|ZP_04641238.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia mollaretii ATCC 43969]
gi|238718385|gb|EEQ10207.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia mollaretii ATCC 43969]
Length = 79
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 46 FIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFM 105
+ D YE ++ L +SI VH +G+ ++ DYI ++++
Sbjct: 1 MVIVPDITYEIWRGFFASHITKVFTLLTLLSILVHAWIGLWQVLTDYIKPLAIRLVLQLA 60
Query: 106 N 106
Sbjct: 61 V 61
>gi|269837028|ref|YP_003319256.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphaerobacter thermophilus DSM 20745]
gi|269786291|gb|ACZ38434.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Sphaerobacter thermophilus DSM 20745]
Length = 155
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAP---YEQIVSVLSNVAVASIMGLGTISISVHM 81
+ R + + I I + Y+ + ++ + L + +H
Sbjct: 43 WYFFRVSGLLLILLAITHVVIMHVINTVDEIDYDFVADRWNSPFWRAFDWLMLVLALLHG 102
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G ++ ++DY+ R ++ + ++ +I +++
Sbjct: 103 LNGARIAVDDYVRPRGWRVFAHSVLWSTAIIFLIIGSIAVV 143
>gi|116182244|ref|XP_001220971.1| hypothetical protein CHGG_01750 [Chaetomium globosum CBS 148.51]
gi|88186047|gb|EAQ93515.1| hypothetical protein CHGG_01750 [Chaetomium globosum CBS 148.51]
Length = 173
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 20/103 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ R A + +P + + ++ +
Sbjct: 67 SPSHGSYHWTFDRLVAASLVPL-----------------TVAPFAAGSLNPTLDAFLCAT 109
Query: 77 ISVHMQLGMQVIIEDYIHYRLL---KIMFLFMNSCFVLLLIIF 116
I +H G Q +I DY+ + + + F++ + ++ +
Sbjct: 110 ILIHSHTGFQNVIIDYLPKKRVPRTRKAFMWGLNAATAVVGLA 152
>gi|297201915|ref|ZP_06919312.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sviceus ATCC 29083]
gi|197712711|gb|EDY56745.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sviceus ATCC 29083]
Length = 126
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEDYDKVVATYKTPLVACLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|254385208|ref|ZP_05000540.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1]
gi|194344085|gb|EDX25051.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1]
Length = 126
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ N VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|134301287|ref|YP_001121255.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis WY96-3418]
gi|194324382|ref|ZP_03058155.1| hypothetical protein FTE_0149 [Francisella tularensis subsp.
novicida FTE]
gi|208780226|ref|ZP_03247568.1| hypothetical protein FTG_0368 [Francisella novicida FTG]
gi|134049064|gb|ABO46135.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis WY96-3418]
gi|194321447|gb|EDX18932.1| hypothetical protein FTE_0149 [Francisella tularensis subsp.
novicida FTE]
gi|208743875|gb|EDZ90177.1| hypothetical protein FTG_0368 [Francisella novicida FTG]
gi|282158361|gb|ADA77752.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis NE061598]
gi|332678934|gb|AEE88063.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella cf. novicida Fx1]
Length = 117
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 9 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYL 68
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 69 AMFFHAWVGIWIICGDYI-KFAWASALVMLSFVLVYIFCFFWLFAVL 114
>gi|15021578|gb|AAK77854.1|AF362735_1 succinate dehydrogenase subunit 4 [Solanum lycopersicum]
Length = 100
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 22 QRITAAFLLPLIII------------YKKVSSTF----------LLNLSLFWHINEGIEE 59
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ DY+H + + L F+L++
Sbjct: 60 IMADYVHQEMTRNWILVYLRLFLLIV 85
>gi|189501421|ref|YP_001960891.1| succinate dehydrogenase, cytochrome b556 subunit [Chlorobium
phaeobacteroides BS1]
gi|189496862|gb|ACE05410.1| succinate dehydrogenase, cytochrome b556 subunit [Chlorobium
phaeobacteroides BS1]
Length = 154
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 6/121 (4%)
Query: 4 DMRSSLGRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLS 62
R+ L V + G +I R T ++ + ++ I G+ +E ++
Sbjct: 26 SFRTFLSTVFSY-RVRSGMAAWILHRVTGLSLVLYLAIHIMGLRSLGNPLAFEAYITGYR 84
Query: 63 NVAVASIMGLGTISISVHMQLGMQVIIED-YIHYRLLK---IMFLFMNSCFVLLLIIFCL 118
N + S++ H G+++ +D Y K L + ++ + +
Sbjct: 85 NPLFKFAEVMLLGSVAFHAFNGLRIFAQDMYFRSERQKPLFYAVLALTIIVTIIGGLPII 144
Query: 119 F 119
F
Sbjct: 145 F 145
>gi|295838573|ref|ZP_06825506.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. SPB74]
gi|197697801|gb|EDY44734.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. SPB74]
Length = 126
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ N VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPVVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G+++I D+
Sbjct: 66 LVAAILFHALNGLRIIAVDF 85
>gi|326435966|gb|EGD81536.1| hypothetical protein PTSG_02255 [Salpingoeca sp. ATCC 50818]
Length = 152
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G GH+ +R ++A + + + D ++
Sbjct: 51 SDTTGLGHWKLERVVSVALVGLVPAAFVAPGPFVDYSLA-------------------VT 91
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ +H +GM + DY+H + K + F+N V + + L
Sbjct: 92 MPLHTYMGMDCVFTDYVHGAMTKPLAKFLN-AVVHVGALGGLL 133
>gi|302519501|ref|ZP_07271843.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. SPB78]
gi|302428396|gb|EFL00212.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. SPB78]
Length = 126
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ N VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G+++I D+
Sbjct: 66 LVAAILFHALNGLRIIAVDF 85
>gi|288931614|ref|YP_003435674.1| succinate dehydrogenase, subunit C (SdhC) [Ferroglobus placidus DSM
10642]
gi|288893862|gb|ADC65399.1| succinate dehydrogenase, subunit C (SdhC) [Ferroglobus placidus DSM
10642]
Length = 122
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 16 GSAKDGTGHFIKQRFTAIANIPFIIFFIAFF--IKYGDAPYEQIVSVLSNVAVASIMGLG 73
G + G F R T + + +++ + F ++YG YE ++ A + L
Sbjct: 10 GRSLSGVS-FSLHRITGMVLLIYLVLHLTFLTSLRYGKDVYESLIEKTVQPATLPLDMLL 68
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAIL 127
++ H GM+VI+ ++ L+ +++ ++ I+ + + K +
Sbjct: 69 VLATFYHAFNGMRVILHEFGLAVELRKALIYVTYALTIIFWIYASYVMYKFVVG 122
>gi|86739393|ref|YP_479793.1| succinate dehydrogenase subunit D [Frankia sp. CcI3]
gi|86566255|gb|ABD10064.1| succinate dehydrogenase subunit D [Frankia sp. CcI3]
Length = 153
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 10/127 (7%)
Query: 6 RSS-LGRVRGM-GSAKDGTG----HFIKQRFTAIANIPFIIFFIAFFIKYGDA----PYE 55
R+ L R RG GSAK T ++ R + + ++ + +
Sbjct: 21 RTPGLSRRRGKPGSAKARTNFELYAWVFMRVSGLLLFFLVLGHLFIMNILDGGVQRVNFG 80
Query: 56 QIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
+ ++ + + + +H G++ II DY + + L++
Sbjct: 81 FVAGRWASPFWRTWDLVMLLLAELHGTNGLRTIINDYAGRPQTRFWLKTLLYTSAFLVVA 140
Query: 116 FCLFSLL 122
+
Sbjct: 141 LGTLVIF 147
>gi|320450964|ref|YP_004203060.1| succinate dehydrogenase, membrane subunit [Thermus scotoductus
SA-01]
gi|320151133|gb|ADW22511.1| succinate dehydrogenase, membrane subunit [Thermus scotoductus
SA-01]
Length = 131
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Query: 25 FIKQRFTAIANIPFII---FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + +I + A YE + LS L +H
Sbjct: 24 WVFMRISGVVLVFLLIGHMWMNAVITDLNSIDYEYVAKRLSQTTWKIYDLLILALGLLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIM 101
G++ +++D+I +
Sbjct: 84 ANGLRYVLDDWIRNPSRRFW 103
>gi|323357072|ref|YP_004223468.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Microbacterium testaceum StLB037]
gi|323273443|dbj|BAJ73588.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Microbacterium testaceum StLB037]
Length = 144
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 7 SSLGRVRG-MGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSN 63
++ R RG + ++G ++ R T +A F++ I I+ Y+ ++ N
Sbjct: 14 TTSKRPRGTLYRGREGMWSWVLHRITGVAIFFFLLVHILDTALIRVSPEAYDAVIGTYKN 73
Query: 64 VAVASIMGLGTISISVHMQLGMQVIIEDY 92
+ +I+ H G+++I+ D+
Sbjct: 74 PIMGLGEVALVGAIAYHAFNGLRIILVDF 102
>gi|289641512|ref|ZP_06473675.1| succinate dehydrogenase, cytochrome b556 subunit [Frankia
symbiont of Datisca glomerata]
gi|289508722|gb|EFD29658.1| succinate dehydrogenase, cytochrome b556 subunit [Frankia
symbiont of Datisca glomerata]
Length = 131
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAF------FIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ + Y+ +++ N V +
Sbjct: 13 REGMWSWVAHRITGV----LIFFFLFAHVLDTALVRVSPSSYDTVIATYKNPVVNLLEVG 68
Query: 73 GTISISVHMQLGMQVIIEDY 92
++ H G+++++ D+
Sbjct: 69 LVAAVLFHALNGIRIVLIDF 88
>gi|254373544|ref|ZP_04989031.1| succinate dehydrogenase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151571269|gb|EDN36923.1| succinate dehydrogenase [Francisella novicida GA99-3549]
Length = 122
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 14 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYL 73
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 74 AMFFHAWVGIWIICGDYI-KFAWASALVMLSFILVYIFCFFWLFAVL 119
>gi|256371006|ref|YP_003108830.1| succinate dehydrogenase, cytochrome b556 subunit [Acidimicrobium
ferrooxidans DSM 10331]
gi|256007590|gb|ACU53157.1| succinate dehydrogenase, cytochrome b556 subunit [Acidimicrobium
ferrooxidans DSM 10331]
Length = 138
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTISI 77
K G FI R T FI+ I D YEQI + N+ + ++
Sbjct: 25 KTGQWAFILHRVTGFLVFMFILLHIVDVATLNDPHVYEQIHQLYGNIFLRLFEVGLLFAL 84
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLF-MNSCFVLLLIIFCLFSLLKIAILG 128
H G++VI+ D+ + LF +LL I + ++K +G
Sbjct: 85 LYHALNGLRVIMIDFFPGAVRNERALFQAMLGLSVLLTIVGGYYIVKPFFVG 136
>gi|289705970|ref|ZP_06502344.1| putative succinate dehydrogenase, membrane subunit (SdhD)
[Micrococcus luteus SK58]
gi|289557307|gb|EFD50624.1| putative succinate dehydrogenase, membrane subunit (SdhD)
[Micrococcus luteus SK58]
Length = 159
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ R + + + I + + GD + ++ + +++ H
Sbjct: 36 WLFMRISGVFLVVLIAVHLTTNLLVGDGIHAVDFGFVAGKWAHPLWQFWDLALLWLAMLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + + ++I+ +
Sbjct: 96 GANGVRTIINDYTRRGTGRFWLTMILYIATAVIIVLGTLVIF 137
>gi|164659796|ref|XP_001731022.1| hypothetical protein MGL_2021 [Malassezia globosa CBS 7966]
gi|159104920|gb|EDP43808.1| hypothetical protein MGL_2021 [Malassezia globosa CBS 7966]
Length = 232
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
AK G+ H+ +R A A +P V+ + + A + G + ++
Sbjct: 72 AKHGSYHWAFERLVATALVPMF-----------------AVATVKHGACGVLDGALSATL 114
Query: 78 SVHMQLGMQVIIEDYI 93
+H +G +I DYI
Sbjct: 115 LLHTHMGFGQVIVDYI 130
>gi|86739394|ref|YP_479794.1| succinate dehydrogenase, cytochrome b subunit [Frankia sp. CcI3]
gi|86566256|gb|ABD10065.1| succinate dehydrogenase subunit C [Frankia sp. CcI3]
Length = 131
Score = 35.8 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 43/108 (39%), Gaps = 13/108 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAF------FIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + + FF+ ++ Y +++ V + V +
Sbjct: 13 REGMWSWVAHRITGV----LVFFFLFAHVLDTALVRVSPTSYNEVIEVYKSPIVNLLEVG 68
Query: 73 GTISISVHMQLGMQVIIEDYIHYRLL---KIMFLFMNSCFVLLLIIFC 117
++ H G+++++ D+ +++++ + VLL+
Sbjct: 69 LVAAVLYHALNGIRIMLIDFWESGPRYQKQMLYVELVIFVVLLVAAAS 116
>gi|328884581|emb|CCA57820.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
venezuelae ATCC 10712]
Length = 126
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|156054650|ref|XP_001593251.1| hypothetical protein SS1G_06173 [Sclerotinia sclerotiorum 1980]
gi|154703953|gb|EDO03692.1| hypothetical protein SS1G_06173 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 192
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+ IP + +S + + +
Sbjct: 86 SPSHGSYHWTFERLIAVGLIPL-----------------TVAPFVSGSLNPATDAILCAA 128
Query: 77 ISVHMQLGMQVIIEDYIHYRLL---KIMFLFMNSCFVLLLII 115
I +H +G + + DYI + L + +F + +L+ +
Sbjct: 129 ILIHSHIGFESCVIDYIPRKRLPKTRALFWWGLRGATVLVGV 170
>gi|56707252|ref|YP_169148.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110669722|ref|YP_666279.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis FSC198]
gi|118498200|ref|YP_899250.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. novicida U112]
gi|187931029|ref|YP_001891013.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Francisella tularensis subsp. mediasiatica FSC147]
gi|254369936|ref|ZP_04985944.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254375008|ref|ZP_04990488.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella novicida GA99-3548]
gi|254874088|ref|ZP_05246798.1| sdhD, succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|56603744|emb|CAG44706.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320055|emb|CAL08089.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis FSC198]
gi|118424106|gb|ABK90496.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella novicida U112]
gi|151568182|gb|EDN33836.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis FSC033]
gi|151572726|gb|EDN38380.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella novicida GA99-3548]
gi|187711938|gb|ACD30235.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Francisella tularensis subsp. mediasiatica FSC147]
gi|254840087|gb|EET18523.1| sdhD, succinate dehydrogenase hydrophobic membrane anchor protein
[Francisella tularensis subsp. tularensis MA00-2987]
Length = 122
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD---APYEQIVSVLSNV-AVASIMGLGTI 75
G F QR TA+ + + I + Y+ + ++ + +
Sbjct: 14 SGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYL 73
Query: 76 SISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
++ H +G+ +I DYI + ++ V + F LF++L
Sbjct: 74 AMFFHAWVGIWIICGDYI-KFAWASALVMLSFVLVYIFCFFWLFAVL 119
>gi|302499696|ref|XP_003011843.1| hypothetical protein ARB_01822 [Arthroderma benhamiae CBS 112371]
gi|291175397|gb|EFE31203.1| hypothetical protein ARB_01822 [Arthroderma benhamiae CBS 112371]
Length = 204
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I AP+ +S V A + G I
Sbjct: 98 SPTHGSYHWTFERVVAASLIPLTI-----------APFAS--GSVSPVLDAVLCGTLVI- 143
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC---FVLLLII 115
H +G Q +I DY + F+N F L +
Sbjct: 144 ---HSHIGFQAMIADYFRPWRVPKTSAFLNWLLRGFTLATAV 182
>gi|310789953|gb|EFQ25486.1| CybS protein [Glomerella graminicola M1.001]
Length = 175
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ R A +P I AP+ + + L I +
Sbjct: 72 HGSYHWTFDRLLAAGLVPITI-----------APFA------AGSLNPTTDALLCAMILI 114
Query: 80 HMQLGMQVIIEDYI---HYRLLKIMFLFMNSCFVLLLII 115
H G Q II DY+ HY + ++ + L+ +
Sbjct: 115 HSHTGFQNIIIDYVPTKHYPKSRKATMWGLNLATALVGL 153
>gi|302655525|ref|XP_003019549.1| hypothetical protein TRV_06423 [Trichophyton verrucosum HKI 0517]
gi|291183281|gb|EFE38904.1| hypothetical protein TRV_06423 [Trichophyton verrucosum HKI 0517]
Length = 204
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I AP+ +S V A + G I
Sbjct: 98 SPTHGSYHWTFERVVAASLIPLTI-----------APFAS--GSVSPVLDAVLCGTLVI- 143
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC---FVLLLII 115
H +G Q +I DY + F+N F L +
Sbjct: 144 ---HSHIGFQAMIADYFRPWRVPKTSAFLNWLLRGFTLATAV 182
>gi|145225422|ref|YP_001136100.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium gilvum
PYR-GCK]
gi|145217908|gb|ABP47312.1| succinate dehydrogenase subunit C [Mycobacterium gilvum PYR-GCK]
Length = 142
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R + F+ + ++ Y +++ V + ++ H
Sbjct: 34 WLLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLYHAL 93
Query: 83 LGMQVIIEDYI---HYRLLKIMFLFMNSCFVLLLIIFCLF 119
G+++I+ D+ K++++ VL +
Sbjct: 94 NGIRIILIDFWSEGPRHQRKMLWIIAGIFIVLFTAGLGVI 133
>gi|194766243|ref|XP_001965234.1| GF21167 [Drosophila ananassae]
gi|190617844|gb|EDV33368.1| GF21167 [Drosophila ananassae]
Length = 1441
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS-VHMQL-GMQVII 89
+ A + ++ F+ + + Y N I + + + H + +QV
Sbjct: 1324 SFALLAILLHFVVISVTFVHRDYAL---WQRNPFTNRIWAITCLVLLIFHGIICTLQVAF 1380
Query: 90 EDYIHYRLLKIMFLFMNSC 108
+D++ +L K+ +
Sbjct: 1381 DDFLQDQLPKVWVAMLVLF 1399
>gi|297192539|ref|ZP_06909937.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151391|gb|EDY61989.2| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
pristinaespiralis ATCC 25486]
Length = 126
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+I H G++VI D+ Y+ + + +++ ++ +
Sbjct: 66 LVAAILFHALNGLRVIAVDFWSKGPRYQKQMLWSVMAIWFVLMVGALYPVL 116
>gi|291437668|ref|ZP_06577058.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis
ATCC 14672]
gi|291340563|gb|EFE67519.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis
ATCC 14672]
Length = 126
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+Q+V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDQVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G++VI D+ I + L+ ++L++ ++ +L
Sbjct: 66 LVAAILFHALNGLRVIAVDFWIKGARYQKQMLWTVVAVWVVLMLGAIYPVL 116
>gi|220911974|ref|YP_002487283.1| succinate dehydrogenase, membrane subunit (SdhD) [Arthrobacter
chlorophenolicus A6]
gi|219858852|gb|ACL39194.1| putative succinate dehydrogenase, membrane subunit (SdhD)
[Arthrobacter chlorophenolicus A6]
Length = 153
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ R + + + I + + G+ + ++ +++ H
Sbjct: 32 WLFMRLSGVVLVVLIFGHLFVNLMVGEGIHAIDFGFVAGKWADPFWQFWDLAMLWLAMLH 91
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + + +++I+ +
Sbjct: 92 GTNGVRTIINDYAEKDSTRRWLKTVLYSATVVIIVLGTLVIF 133
>gi|15021584|gb|AAK77857.1|AF362738_1 succinate dehydrogenase subunit 4 [Euphorbia pubentissima]
Length = 101
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 22 QRITAALLLPLIII------------YKKVSSTF----------LLNLSLFWHINKGIED 59
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ DY+H + + + L F+L++
Sbjct: 60 IMADYVHQEMTRNLILVYFRLFLLIV 85
>gi|239917021|ref|YP_002956579.1| succinate dehydrogenase subunit D [Micrococcus luteus NCTC 2665]
gi|281414517|ref|ZP_06246259.1| succinate dehydrogenase subunit D [Micrococcus luteus NCTC 2665]
gi|239838228|gb|ACS30025.1| succinate dehydrogenase subunit D [Micrococcus luteus NCTC 2665]
Length = 159
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV----H 80
++ R + + + I + + GD + ++ + +++ H
Sbjct: 36 WLFMRISGVFLVVLIAVHLTTNLLVGDGIHAVDFGFVAGKWAHPLWQFWDLALLWLAMLH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ II DY + + ++II +
Sbjct: 96 GANGVRTIINDYTRRGTGRFWLTMILYIATAVIIILGTLVIF 137
>gi|302553710|ref|ZP_07306052.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471328|gb|EFL34421.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 126
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G++VI D+ I + L+ ++L++ ++ +L
Sbjct: 66 LVAAILFHALNGLRVIAVDFWIKGARYQKQMLWTVVAVWVVLMLGAIYPVL 116
>gi|315445770|ref|YP_004078649.1| succinate dehydrogenase subunit C [Mycobacterium sp. Spyr1]
gi|315264073|gb|ADU00815.1| succinate dehydrogenase subunit C [Mycobacterium sp. Spyr1]
Length = 142
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R + F+ + ++ Y +++ V + ++ H
Sbjct: 34 WLLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLYHAL 93
Query: 83 LGMQVIIEDYI---HYRLLKIMFLFMNSCFVLLLIIFCLF 119
G+++I+ D+ K++++ VL +
Sbjct: 94 NGIRIILIDFWSEGPRHQRKMLWIIAGIFLVLFTAGLGVI 133
>gi|238756030|ref|ZP_04617354.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia ruckeri ATCC 29473]
gi|238705755|gb|EEP98148.1| Succinate dehydrogenase hydrophobic membrane anchor subunit
[Yersinia ruckeri ATCC 29473]
Length = 82
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 45 FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYI 93
F D YE ++ L +SI H +G+ ++ DYI
Sbjct: 3 FVAIAPDITYEIWRGFFASSITKVFTLLTLLSILAHAWIGLWQVLTDYI 51
>gi|260950361|ref|XP_002619477.1| hypothetical protein CLUG_00636 [Clavispora lusitaniae ATCC 42720]
gi|238847049|gb|EEQ36513.1| hypothetical protein CLUG_00636 [Clavispora lusitaniae ATCC 42720]
Length = 165
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 19/102 (18%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
+G+ H+ +R A++ +P +F Y V + L +
Sbjct: 62 EGSYHWTYERILAMSLLPLSVF-----QYGAGCDY---------PLVDTAFCLTLL---F 104
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL--LIIFCLF 119
H G + I DYI R+ L + L + ++ ++
Sbjct: 105 HAHSGFKSCIIDYIPERVYGFWHLAASRLLSLGSFVAMYGIY 146
>gi|303317976|ref|XP_003068990.1| CybS family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240108671|gb|EER26845.1| CybS family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320036865|gb|EFW18803.1| succinate dehydrogenase subunit CybS [Coccidioides posadasii str.
Silveira]
Length = 194
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 33/102 (32%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R AI+ IP I + + +
Sbjct: 88 SPTHGSYHWDFERIIAISLIPLTI-----------------TPFAAGSLNPVTDAILCGA 130
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
+ +H +G Q +I DY+ R K + L + +
Sbjct: 131 LVLHSHIGFQALIVDYLPQRRVPKTKAFCTWALRAATLTVAV 172
>gi|71019523|ref|XP_759992.1| hypothetical protein UM03845.1 [Ustilago maydis 521]
gi|46099518|gb|EAK84751.1| hypothetical protein UM03845.1 [Ustilago maydis 521]
Length = 172
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 19/104 (18%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A G+ H+ +R ++A +P + + + A + G +S+
Sbjct: 67 ASHGSNHWAFERGLSVALVPLV-----------------AAGFAKHGSSAILDGALALSL 109
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCF--VLLLIIFCLF 119
VH +G I DY+H R I L ++ L+
Sbjct: 110 VVHSHIGFDCIFADYLHKRKFPIAGPLATWSLRAATLATLYGLY 153
>gi|21223233|ref|NP_629012.1| succinate dehydrogenase membrane subunit [Streptomyces coelicolor
A3(2)]
gi|7649587|emb|CAB89076.1| putative succinate dehydrogenase membrane subunit [Streptomyces
coelicolor A3(2)]
Length = 160
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + + ++ L +H
Sbjct: 52 WLFMRLSGVVLVVLVLGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 112 GANGLRTVINDYAERPNTRLWLKGLLYTATVFTILLGTLVIF 153
>gi|295396419|ref|ZP_06806581.1| succinate dehydrogenase cytochrome b558 subunit [Brevibacterium
mcbrellneri ATCC 49030]
gi|294970721|gb|EFG46634.1| succinate dehydrogenase cytochrome b558 subunit [Brevibacterium
mcbrellneri ATCC 49030]
Length = 125
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
+G ++ R T + F++ + ++ A Y+ ++ +A +
Sbjct: 13 HEGMWSWVAHRVTGVGIFFFLLVHVLDTALVRVSPAAYDAVIGTYKTPIMAMAEIGLVAA 72
Query: 77 ISVHMQLGMQVIIEDY 92
I H G++VI+ D+
Sbjct: 73 IIFHAFNGVRVILVDF 88
>gi|256785664|ref|ZP_05524095.1| succinate dehydrogenase membrane subunit [Streptomyces lividans
TK24]
gi|289769557|ref|ZP_06528935.1| succinate dehydrogenase membrane subunit [Streptomyces lividans
TK24]
gi|289699756|gb|EFD67185.1| succinate dehydrogenase membrane subunit [Streptomyces lividans
TK24]
Length = 160
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + + ++ L +H
Sbjct: 52 WLFMRLSGVVLVVLVLGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 112 GANGLRTVINDYAERPNTRLWLKGLLYTATVFTILLGTLVIF 153
>gi|118471568|ref|YP_886048.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118172855|gb|ABK73751.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium
smegmatis str. MC2 155]
Length = 138
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R T F+ + ++ Y +++ V + ++ H
Sbjct: 30 WVLHRITGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLFHAL 89
Query: 83 LGMQVIIEDYI---HYRLLKIMFLFMNSCFVLLLIIFCLF 119
G++VI+ D+ +++ + V+ + +
Sbjct: 90 NGIRVILIDFWAKGPRYQRQMLAVIAGLFLVIFIAAVGVI 129
>gi|21223234|ref|NP_629013.1| succinate dehydrogenase membrane subunit [Streptomyces coelicolor
A3(2)]
gi|289769556|ref|ZP_06528934.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
lividans TK24]
gi|7649588|emb|CAB89077.1| putative succinate dehydrogenase membrane subunit [Streptomyces
coelicolor A3(2)]
gi|289699755|gb|EFD67184.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
lividans TK24]
Length = 126
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDTVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G++VI D+ + + L+ ++L++ ++ +L
Sbjct: 66 LVAAILFHALNGLRVIAVDFWVKGARYQKQMLWTVVALWVVLMLGAIYPVL 116
>gi|322435016|ref|YP_004217228.1| hypothetical protein AciX9_1389 [Acidobacterium sp. MP5ACTX9]
gi|321162743|gb|ADW68448.1| hypothetical protein AciX9_1389 [Acidobacterium sp. MP5ACTX9]
Length = 268
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 25 FIKQRFTAIANIPFII-------FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
+I QR T I + +II F ++ A + ++ LSN + +I + I+
Sbjct: 119 YITQRVTGIIALAYIIQHVVRQRFMGVQLPEHPGAAFAKVQHELSNPWMLAIYVVAMIAT 178
Query: 78 SVHMQLGMQ 86
+ H G+
Sbjct: 179 TWHFAYGIW 187
>gi|119186173|ref|XP_001243693.1| hypothetical protein CIMG_03134 [Coccidioides immitis RS]
Length = 194
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 20/99 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R AI+ IP I + + ++ +
Sbjct: 91 HGSYHWDFERIIAISLIPLTI-----------------TPFAAGSLNPVTDAILCGALVL 133
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H +G Q +I DY+ R K + L + +
Sbjct: 134 HSHIGFQALIVDYLPQRRVPKTKAFCTWALRAATLTVAV 172
>gi|302558849|ref|ZP_07311191.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
griseoflavus Tu4000]
gi|302476467|gb|EFL39560.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
griseoflavus Tu4000]
Length = 126
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDNVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G++VI D+ + + L+ +L++ ++ +L
Sbjct: 66 LVAAILFHALNGLRVIAVDFWVKGARYQKQMLWTVVALWFVLMLGAIYPVL 116
>gi|291279088|ref|YP_003495923.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Deferribacter desulfuricans SSM1]
gi|290753790|dbj|BAI80167.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Deferribacter desulfuricans SSM1]
Length = 105
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 11/104 (10%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
MGS+ G ++ QR + + I I FI FF + ++G
Sbjct: 7 MGSSDRGVFEWLMQRISGVILILVI--FIHFFSMIKSGEWG---------LKKIVLGPLF 55
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H G ++I +DY+ + + L + + L I L
Sbjct: 56 AFGIFHTLNGFKMITDDYVSNPTWRAIILAIYWIVGVTLAILAL 99
>gi|297201914|ref|ZP_06919311.1| succinate dehydrogenase membrane subunit [Streptomyces sviceus ATCC
29083]
gi|197712712|gb|EDY56746.1| succinate dehydrogenase membrane subunit [Streptomyces sviceus ATCC
29083]
Length = 160
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM---FLFMNSCF 109
+ + ++ L +H G++ II DY ++ L+ + F
Sbjct: 84 GFAFVAGRWASPFWQVWDLLMLWLAMLHGANGLRTIINDYAERPNTRLWLKGLLYTATVF 143
Query: 110 VLLLIIFCLF 119
+LL +F
Sbjct: 144 TILLGTLVIF 153
>gi|18407093|ref|NP_566077.1| SDH4; succinate dehydrogenase (ubiquinone) [Arabidopsis thaliana]
gi|15450445|gb|AAK96516.1| At2g46510/F11C10.20 [Arabidopsis thaliana]
gi|16974453|gb|AAL31230.1| At2g46510/F11C10.20 [Arabidopsis thaliana]
gi|20142341|tpg|DAA00016.1| TPA_exp: succinate dehydrogenase subunit 4 [Arabidopsis thaliana]
gi|20197780|gb|AAM15243.1| Expressed protein [Arabidopsis thaliana]
gi|20197818|gb|AAM15261.1| Expressed protein [Arabidopsis thaliana]
gi|21536746|gb|AAM61078.1| unknown [Arabidopsis thaliana]
gi|330255617|gb|AEC10711.1| succinate dehydrogenase subunit 4 [Arabidopsis thaliana]
Length = 151
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
I + H+ GM+ I+ DY+H + + + + F +++
Sbjct: 104 IPVVFHIHEGMEEILADYVHQEMTRNLIVMSLGLFQIIV 142
>gi|291451705|ref|ZP_06591095.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
albus J1074]
gi|291354654|gb|EFE81556.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces
albus J1074]
Length = 126
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
++ H G++VI D+
Sbjct: 66 LVAAVLFHALNGLRVIAVDF 85
>gi|288931615|ref|YP_003435675.1| succinate dehydrogenase, subunit D (SdhD) [Ferroglobus placidus DSM
10642]
gi|288893863|gb|ADC65400.1| succinate dehydrogenase, subunit D (SdhD) [Ferroglobus placidus DSM
10642]
Length = 115
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 25 FIKQRFTAIANIPFIIF--FIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
F+ Q T I F+I+ ++ ++ YE++V L+N + + +S H
Sbjct: 14 FLFQLITGILLFVFVIYHLYVTHLAEHDALSYEKVVERLANPSFKVAYFVFLAVVSFHAF 73
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAI 126
G++ II D + CF L +I SLL I+
Sbjct: 74 NGLRAIILD--TDFGARNKRAVDVLCFALFVIATAYGSLLLISF 115
>gi|300782783|ref|YP_003763074.1| succinate dehydrogenase cytochrome b-556 subunit [Amycolatopsis
mediterranei U32]
gi|299792297|gb|ADJ42672.1| succinate dehydrogenase cytochrome b-556 subunit [Amycolatopsis
mediterranei U32]
Length = 147
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + FF+ ++ Y+Q++ V + ++
Sbjct: 36 WVLHRITGV----LTFFFLFVHVLDTALVRVSPNTYDQVIETYKTPIVNLLEVGLVGAVL 91
Query: 79 VHMQLGMQVIIEDY 92
H G++V++ D+
Sbjct: 92 FHALNGIRVMLVDF 105
>gi|254839121|gb|ACT83439.1| SdhD [Botryotinia fuckeliana]
Length = 192
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+ +P + +S + L +
Sbjct: 86 SPSHGSYHWTFERLIAVGLVPL-----------------TVAPFVSGSLNPATDALLCAA 128
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
I + +G + I DY + K + +L+ +
Sbjct: 129 ILIRSHIGFESCITDYFPSKRVPKTKAFLWWGLRGATVLVGV 170
>gi|256389984|ref|YP_003111548.1| succinate dehydrogenase, cytochrome b556 subunit [Catenulispora
acidiphila DSM 44928]
gi|256356210|gb|ACU69707.1| succinate dehydrogenase, cytochrome b556 subunit [Catenulispora
acidiphila DSM 44928]
Length = 132
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAF------FIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ QR T + + FF+ ++ Y Q++ N V +
Sbjct: 16 REGMWSWVAQRVTGV----LVFFFLFAHVLDTALVRVSPHTYNQVIGTYKNPVVNLLEVG 71
Query: 73 GTISISVHMQLGMQVIIEDY 92
++ H G+++I D+
Sbjct: 72 LVGAVMFHAFNGLRIIAIDF 91
>gi|15615655|ref|NP_243959.1| succinate dehydrogenase cytochrome b-558 [Bacillus halodurans
C-125]
gi|10175715|dbj|BAB06812.1| succinate dehydrogenase cytochrome b-558 [Bacillus halodurans
C-125]
Length = 209
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 18 AKDGTGH--------FIKQRFTAIANIPFIIFFIA----FFIKYGDAPYEQIVSVLSNVA 65
AK+ T H F+ QR + + + FI + + + Y+ + +LSN
Sbjct: 81 AKNNTSHYGYFRNWMFLLQRISGVFLLIFIAWHVWETRIQAAFGAEVNYDMMADILSNPF 140
Query: 66 VASIMGLGTISISVHMQLGMQ 86
+ LG +S + H G+
Sbjct: 141 MLVFYILGVVSATFHFANGLW 161
>gi|257054606|ref|YP_003132438.1| succinate dehydrogenase subunit D [Saccharomonospora viridis DSM
43017]
gi|256584478|gb|ACU95611.1| succinate dehydrogenase subunit D [Saccharomonospora viridis DSM
43017]
Length = 138
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 8/102 (7%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDAPY----EQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + S+ +H
Sbjct: 28 WLFMRISGLLLVVLVLGHLFIMNILDGGVHRINFAFVAGRWSSPFWQFWDLTMLWLAMIH 87
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++ +IEDY + + +++++ +
Sbjct: 88 GGNGLRTVIEDYARKESTRFWLKMVLYVATVVILLLGTLVIF 129
>gi|330915978|ref|XP_003297244.1| hypothetical protein PTT_07579 [Pyrenophora teres f. teres 0-1]
gi|311330192|gb|EFQ94661.1| hypothetical protein PTT_07579 [Pyrenophora teres f. teres 0-1]
Length = 194
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 20/100 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R + IP + + N SI+ +
Sbjct: 91 HGSYHWSFERIVSAGLIPLTV--------------APFAAGSLNPVTDSILCALLVV--- 133
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLIIF 116
H +G + I DY + + ++ ++L +
Sbjct: 134 HSHIGFESCIVDYFPKKRVPKTRAAAMWALRAGTVVLGLA 173
>gi|291287900|ref|YP_003504716.1| hypothetical protein Dacet_1997 [Denitrovibrio acetiphilus DSM
12809]
gi|290885060|gb|ADD68760.1| hypothetical protein Dacet_1997 [Denitrovibrio acetiphilus DSM
12809]
Length = 102
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 15 MGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGT 74
MG++ GT ++ QR + I + F+ FF ++ +++ A A
Sbjct: 7 MGASDSGTVGWLMQRVSGAILILVV--FVHFFSMIKGGS-AGMMQIITGPAAAF------ 57
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCL 118
H G ++I +DY+ + + + L+I +
Sbjct: 58 --GVFHTFNGFKMITDDYVPSEGWRGVIYGAYWICAITLVILAV 99
>gi|297158116|gb|ADI07828.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
bingchenggensis BCW-1]
Length = 115
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + I FF+ ++ Y+ +V+ N V + +I
Sbjct: 4 WVAHRVTGV----LIFFFLFVHVLDTSLVRVSPEAYDDVVATYKNPIVNVMEYGLVAAIL 59
Query: 79 VHMQLGMQVIIEDY 92
H G++VI D+
Sbjct: 60 FHALNGLRVIAVDF 73
>gi|302519502|ref|ZP_07271844.1| succinate dehydrogenase membrane subunit [Streptomyces sp. SPB78]
gi|318061838|ref|ZP_07980559.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces sp. SA3_actG]
gi|318076432|ref|ZP_07983764.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces sp. SA3_actF]
gi|333026668|ref|ZP_08454732.1| putative succinate dehydrogenase membrane subunit [Streptomyces sp.
Tu6071]
gi|302428397|gb|EFL00213.1| succinate dehydrogenase membrane subunit [Streptomyces sp. SPB78]
gi|332746520|gb|EGJ76961.1| putative succinate dehydrogenase membrane subunit [Streptomyces sp.
Tu6071]
Length = 162
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 43 IAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM- 101
+ + + ++ L +H G++ +I DY ++
Sbjct: 76 LFLDGGVQKIGFAFVAGRWASPFWQGWDLLMLWLAMLHGGNGLRTVINDYAERPATRMWL 135
Query: 102 --FLFMNSCFVLLLIIFCLF 119
L+ + F +LL +F
Sbjct: 136 KGLLWAATIFTVLLGTLVIF 155
>gi|170783166|ref|YP_001711500.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Clavibacter michiganensis subsp. sepedonicus]
gi|169157736|emb|CAQ02938.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Clavibacter michiganensis subsp. sepedonicus]
Length = 158
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFI----KYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + I + + + + LS+ +H
Sbjct: 36 WMYMRASGVVLVVLIFGHLYVNLIQGEGIKAIDFAFVGGKLSDPFWKVWDIALLWLAVIH 95
Query: 81 MQLGMQVIIEDYIHYRLLKIMF 102
GM+ ++ DY + +
Sbjct: 96 GANGMRTLVNDYAASPRTRTIL 117
>gi|284029310|ref|YP_003379241.1| succinate dehydrogenase, cytochrome b556 subunit [Kribbella
flavida DSM 17836]
gi|283808603|gb|ADB30442.1| succinate dehydrogenase, cytochrome b556 subunit [Kribbella
flavida DSM 17836]
Length = 125
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
++G ++ R T + F++ + ++ Y +++ N V + +
Sbjct: 13 REGMWSWVLHRITGVGIFFFLLVHVLDTALVRVSPEAYNEVIGTYKNPVVGLLEVGLVAA 72
Query: 77 ISVHMQLGMQVIIEDY 92
I H G+++I+ D+
Sbjct: 73 ILFHAFNGVRLILVDF 88
>gi|217968585|ref|YP_002353819.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thauera sp. MZ1T]
gi|217505912|gb|ACK52923.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Thauera sp. MZ1T]
Length = 113
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 47/109 (43%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G ++ QR +A+ + I+ + + ++ ++ L ++
Sbjct: 5 TGQRAWVVQRLSALLLLVLILLAMLALPFASPLDFSAWRALAGGALGGPLIALLFGALCA 64
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
H +GM+ I+ DY+ R L++ L + + +L ++ L SL +A+
Sbjct: 65 HAWVGMRDIVLDYLQPRGLRLAVLGLITVVLLGVLARVLLSLAMVALAA 113
>gi|302558850|ref|ZP_07311192.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Streptomyces griseoflavus Tu4000]
gi|302476468|gb|EFL39561.1| succinate dehydrogenase, hydrophobic membrane anchor protein
[Streptomyces griseoflavus Tu4000]
Length = 160
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM---FLFMNSCF 109
+ + ++ L +H G++ +I DY ++ L+ + F
Sbjct: 84 GFAFVAGRWASPFWQVWDLLMLWLAMLHGSNGLRTVINDYAERPNTRLWLKGLLYTATVF 143
Query: 110 VLLLIIFCLF 119
+LL +F
Sbjct: 144 TILLGTLVIF 153
>gi|115397643|ref|XP_001214413.1| succinate dehydrogenase cytochrome b small subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114192604|gb|EAU34304.1| succinate dehydrogenase cytochrome b small subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 173
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R ++ IP I + N + +++ +
Sbjct: 67 SPSHGSYHWTFERLVSVGLIPLTI--------------APFAAGSLNPVMDAVLCSLLVV 112
Query: 77 ISVHMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLII 115
H +G Q I DY R + ++ F L +
Sbjct: 113 ---HSHIGFQASIIDYFPERRVPKFRTFLNWLLRAFTLTTAV 151
>gi|299138451|ref|ZP_07031630.1| succinate dehydrogenase subunit C [Acidobacterium sp. MP5ACTX8]
gi|298599697|gb|EFI55856.1| succinate dehydrogenase subunit C [Acidobacterium sp. MP5ACTX8]
Length = 265
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
H +QRF+ I+ ++ A + ++ L N + +I + I+ H
Sbjct: 130 VQHLWRQRFSGISL-----------PEHPGAAFAKVQHELHNPWMLAIYVIAMIATCWHF 178
Query: 82 QLGMQ 86
G+
Sbjct: 179 AYGIW 183
>gi|307331944|ref|ZP_07611039.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
violaceusniger Tu 4113]
gi|306882418|gb|EFN13509.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
violaceusniger Tu 4113]
Length = 126
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ N V +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTSLVRVSPEAYDNVVATYKNPVVNLMEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|108798201|ref|YP_638398.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp.
MCS]
gi|119867297|ref|YP_937249.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp.
KMS]
gi|126433858|ref|YP_001069549.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp.
JLS]
gi|108768620|gb|ABG07342.1| succinate dehydrogenase subunit C [Mycobacterium sp. MCS]
gi|119693386|gb|ABL90459.1| succinate dehydrogenase subunit C [Mycobacterium sp. KMS]
gi|126233658|gb|ABN97058.1| succinate dehydrogenase subunit C [Mycobacterium sp. JLS]
Length = 142
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 39/115 (33%), Gaps = 5/115 (4%)
Query: 10 GRVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVA 67
R R + G ++ R + A F+ + ++ Y ++ +
Sbjct: 19 SRRRTLYRGDPGMWSWVLHRISGAAIFFFLFVHVVDTALVRVSPEAYNAVIETYKTPIIG 78
Query: 68 SIMGLGTISISVHMQLGMQVIIEDYIHYRL---LKIMFLFMNSCFVLLLIIFCLF 119
+ ++ H G++VI+ D+ +++++ +++ +
Sbjct: 79 LMEIGLVGAVLYHALNGIRVILIDFWSKGARYQRQMLWVVAGVFITVMIASLGVI 133
>gi|224083203|ref|XP_002189835.1| PREDICTED: similar to putative succinate dehydrogenase complex
subunit D [Taeniopygia guttata]
Length = 290
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 22/102 (21%)
Query: 14 GMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG 73
G G++K + H+ +R ++ + + + A L
Sbjct: 186 GHGTSKAASLHWTGERAVSVLLLGLLP------------------AAYLYPGPAVDYSLA 227
Query: 74 TISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLII 115
++++H G+ +I DY+H + N+ +L +
Sbjct: 228 -AALTLHGHWGLGQVITDYVHGD---VPIKVANTGLYILSAL 265
>gi|332671369|ref|YP_004454377.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas fimi
ATCC 484]
gi|332340407|gb|AEE46990.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas fimi
ATCC 484]
Length = 131
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
++G ++ R T +A F++ + ++ Y ++++ N + +
Sbjct: 17 REGMWSWVAHRVTGVAIFFFLLVHVLDTSLVRVSPEAYNEVIATYKNPVMGLGEAGLVAA 76
Query: 77 ISVHMQLGMQVIIEDYIHYRL--LKIMFLFMNSCFVLLLIIF 116
I H G+++++ D+ ++M + FV+ + F
Sbjct: 77 IVFHAFNGIRIVLVDFWSKGTKYQRVMLWVVLGLFVVTMAGF 118
>gi|163869248|ref|YP_001610504.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
tribocorum CIP 105476]
gi|161018951|emb|CAK02509.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
tribocorum CIP 105476]
Length = 133
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 26 IKQRFTAIANIPFIIFFIAFFIKYG--DAPYEQIVSVLSNVAVASIMGLGTISISVHMQL 83
I R T +A +FF + I + + + + S+ I+ L T++ HM
Sbjct: 29 IAHRITGMALYVGTVFFAVWLIAIACGEETFRTVHEIYSSWFGLCILFLYTLAGVHHMVG 88
Query: 84 GMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL 121
G++ I+ D L K + + + + F++
Sbjct: 89 GVRHIVWDLKPCLLAKEKA-TATAWATVFISLIVTFAI 125
>gi|294631046|ref|ZP_06709606.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. e14]
gi|292834379|gb|EFF92728.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. e14]
Length = 126
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++VS VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEDYDKVVSTYKTPIVACLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|156841802|ref|XP_001644272.1| hypothetical protein Kpol_1030p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114911|gb|EDO16414.1| hypothetical protein Kpol_1030p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 15/104 (14%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R TA +P + I Y + V + S
Sbjct: 72 HGSYHWSYERVTAATVLPLTSYAI----------YAAATGGELHPLVDGALA---TSALF 118
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFV--LLLIIFCLFSL 121
++Q + I DYI R + N + + ++ +++L
Sbjct: 119 YLQYEFKSCIIDYIPKRKFGVWHNLANYLLLGGTAVGLYGIYTL 162
>gi|302536398|ref|ZP_07288740.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. C]
gi|302445293|gb|EFL17109.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
sp. C]
Length = 126
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|258651547|ref|YP_003200703.1| succinate dehydrogenase, cytochrome b556 subunit [Nakamurella
multipartita DSM 44233]
gi|258554772|gb|ACV77714.1| succinate dehydrogenase, cytochrome b556 subunit [Nakamurella
multipartita DSM 44233]
Length = 143
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIAF------FIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + FF+ ++ Y Q++ N V + ++
Sbjct: 31 WVAHRITGV----LTFFFLFAHVLDTALVRVSPEAYNQVIETYKNPLVNLMEVGLVGAVL 86
Query: 79 VHMQLGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIF 116
H G++V++ D+ Y+ + + V++ ++
Sbjct: 87 YHALNGIRVMLVDFWAKGARYQRTMLWIILAIWFVVMVPGVY 128
>gi|170098542|ref|XP_001880490.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644928|gb|EDR09177.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 122
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 18/102 (17%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R + +P + S + V +++G+G + +
Sbjct: 18 HGSYHWAFERILSAGLVPLT-------------GAAFVTSATAYPVVDALLGVGLV---M 61
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCF--VLLLIIFCLF 119
H LG I+ DY+H R ++ + + ++
Sbjct: 62 HSHLGFGQIVADYVHPRKFPVLGPVATWGLRTATVATLVGVY 103
>gi|297192540|ref|ZP_06909938.1| succinate dehydrogenase membrane subunit [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151392|gb|EFH31126.1| succinate dehydrogenase membrane subunit [Streptomyces
pristinaespiralis ATCC 25486]
Length = 158
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM---FLFMNSCF 109
+ + ++ + L +H G++ +I DY ++ L+ + F
Sbjct: 82 GFAFVAGRWASPFWQTWDLLMLWLAMLHGANGLRTVINDYAERPNTRLWLKGLLYTATVF 141
Query: 110 VLLLIIFCLF 119
+LL +F
Sbjct: 142 TILLGTLVIF 151
>gi|295664268|ref|XP_002792686.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226278800|gb|EEH34366.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 198
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 17/76 (22%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I + + + +
Sbjct: 92 SPSHGSYHWTFERIIAASLIPLTI------APFAGGS-----------LNPVMDAVFCGT 134
Query: 77 ISVHMQLGMQVIIEDY 92
I +H +G Q I DY
Sbjct: 135 ILMHSHIGFQACIVDY 150
>gi|284794754|ref|YP_003412107.1| succinate dehydrogenase subunit 4 [Phaeoceros laevis]
gi|254596074|gb|ACT75315.1| succinate dehydrogenase subunit 4 [Phaeoceros laevis]
Length = 86
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 23/95 (24%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
K+ GH+ QR +A I I A AS + L I +
Sbjct: 5 KETLGHWPLQRISAAFLIVMIFI-----------------------ANASTLILLNILLF 41
Query: 79 VHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
H+ +G++ I+ D++H+ + + + L + F L++
Sbjct: 42 WHIHVGIEEILTDHVHHEVTRNLILILLRIFFLII 76
>gi|302544639|ref|ZP_07296981.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302462257|gb|EFL25350.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 126
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ V +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTSLVRVSPEAYDDVVATYKTPIVNLMEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++VI D+
Sbjct: 66 LVAAILFHALNGLRVIAVDF 85
>gi|15021582|gb|AAK77856.1|AF362737_1 succinate dehydrogenase subunit 4 [Gymnocladus dioicus]
Length = 100
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
+S+ H+ G++ I+ DY+H + + + L F L++
Sbjct: 47 LSLFWHINEGIEEIMADYVHQEMTRNLILVYLRLFFLIV 85
>gi|116669692|ref|YP_830625.1| succinate dehydrogenase, cytochrome b subunit [Arthrobacter sp.
FB24]
gi|116609801|gb|ABK02525.1| succinate dehydrogenase subunit C [Arthrobacter sp. FB24]
Length = 126
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
++G ++ R T + F++ + ++ Y ++ N +A +
Sbjct: 13 REGMWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPLMALGETGLVAA 72
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL--LKIAILG 128
I H G+++I D+ + K + + VL +I+ FS+ L +A G
Sbjct: 73 IVFHAFNGLRIIAVDFW-KKGAKYQRQMLWTVLVLWVIVMVGFSIRHLSLAFGG 125
>gi|258651546|ref|YP_003200702.1| succinate dehydrogenase hydrophobic anchor subunit-like protein
[Nakamurella multipartita DSM 44233]
gi|258554771|gb|ACV77713.1| Succinate dehydrogenase hydrophobic anchor subunit-like protein
[Nakamurella multipartita DSM 44233]
Length = 143
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 21/70 (30%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLL 112
+ + ++ L +H G++ +I DY + + V+L
Sbjct: 67 NWGFVAGRWASPFWQIWDLLMLWLAELHGANGLRTVINDYARKDGTRFWLQLLLLISVVL 126
Query: 113 LIIFCLFSLL 122
+ +
Sbjct: 127 TLAVGTLVIF 136
>gi|57524526|ref|NP_001004004.1| succinate dehydrogenase [ubiquinone] cytochrome b small subunit B,
mitochondrial [Danio rerio]
gi|82181864|sp|Q68FN7|DHSDB_DANRE RecName: Full=Succinate dehydrogenase [ubiquinone] cytochrome b
small subunit B, mitochondrial; Short=CybS-B; AltName:
Full=Succinate dehydrogenase complex subunit D-B;
AltName: Full=Succinate-ubiquinone oxidoreductase
cytochrome b small subunit B; AltName:
Full=Succinate-ubiquinone reductase membrane anchor
subunit B; Flags: Precursor
gi|51259897|gb|AAH79507.1| Succinate dehydrogenase complex, subunit D, integral membrane
protein a [Danio rerio]
Length = 158
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 21/107 (19%)
Query: 14 GMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG 73
G GS K T H+ +R +IA + +A+F Y +
Sbjct: 55 GSGS-KAATMHWTGERILSIALLSLAP--VAYFCPSPAVDYSLAAA-------------- 97
Query: 74 TISISVHMQLGMQVIIEDYIHYRL-LKIMFLFMNSCFVLLLIIFCLF 119
+++H G+ ++ DY+H +K+ + + C F
Sbjct: 98 ---LTLHGHWGLGQVVTDYVHGDAKIKMANAGLFVLSTVTFAGLCYF 141
>gi|255716622|ref|XP_002554592.1| KLTH0F08932p [Lachancea thermotolerans]
gi|238935975|emb|CAR24155.1| KLTH0F08932p [Lachancea thermotolerans]
Length = 170
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 26/108 (24%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +RFTA+A +P A + L +
Sbjct: 60 HGSMHWDFERFTAVALVPL-----VGSGLACGAGLSVVADS-----------LLCSVLLA 103
Query: 80 HMQLGMQVIIEDYIH------YRLLKIMFLFMNSCFVLLLIIFCLFSL 121
H +G Q I DYI + L + S L+ F ++ L
Sbjct: 104 HGYVGFQSCIIDYIPKRVYGKNHNYAMYLLTLGS----LVGGFGIYKL 147
>gi|195342447|ref|XP_002037812.1| GM18468 [Drosophila sechellia]
gi|194132662|gb|EDW54230.1| GM18468 [Drosophila sechellia]
Length = 1417
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 34 ANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG-TISISVHMQLG-MQVIIED 91
A + I+ F+ + + + N I + +H + +Q+++ED
Sbjct: 1303 ALLGIILHFVFISVTFVHRDHAL---WQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLED 1359
Query: 92 Y---IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + + ++ LF S +L+ F
Sbjct: 1360 FWVQLPNHWVALLILFGGSLLSMLVSELAKF 1390
>gi|217039531|gb|ACJ76894.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit D
[Alternaria alternata]
Length = 193
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 20/100 (20%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R + IP I + N SI+ +
Sbjct: 90 HGSYHWSFERIVSAGLIPLTI--------------APFAAGSLNPLTDSILCALLVV--- 132
Query: 80 HMQLGMQVIIEDYIHYR---LLKIMFLFMNSCFVLLLIIF 116
H +G + I DY + + ++ + L +
Sbjct: 133 HSHIGFESCIIDYFPSKRVPKTRTAAMWALRAGTVALGLA 172
>gi|302553709|ref|ZP_07306051.1| succinate dehydrogenase membrane subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471327|gb|EFL34420.1| succinate dehydrogenase membrane subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 160
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + + ++ L +H
Sbjct: 52 WLFMRLSGVVLVVLVLGHLLIQLVLDGGVSKIGFAFVAGRWASPFWQVWDLLMLWLAMLH 111
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
G++ +I DY ++ L+ + F +LL +F
Sbjct: 112 GANGLRTVINDYAERANTRLWLKGLLYTATVFTILLGTLVIF 153
>gi|223935221|ref|ZP_03627139.1| hypothetical protein Cflav_PD5183 [bacterium Ellin514]
gi|223896105|gb|EEF62548.1| hypothetical protein Cflav_PD5183 [bacterium Ellin514]
Length = 116
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 11 RVRGMGSAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNV----AV 66
+VR S + GT ++ QR +AI I I Y L +
Sbjct: 2 KVRNFQSYR-GTWAWLTQRISAIVLFLLIPLKIYSGWAAKGKVY--FPDWLGSSRKVHFN 58
Query: 67 ASIMGLGTISISVHMQLGMQVIIEDY 92
++I L ++ +H G++VI+ D+
Sbjct: 59 SAIDILLLLAFLLHGFYGLRVILIDF 84
>gi|323166630|gb|EFZ52389.1| gnt-II system L-idonate transporter [Shigella sonnei 53G]
Length = 338
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A I+ I + EQI+ ++ + A M + I+ + QV+++
Sbjct: 162 AVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFK---QVLVD- 217
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L + LL+ + + +LL+IA+
Sbjct: 218 --SGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSA 253
>gi|242237681|ref|YP_002985862.1| gluconate transporter [Dickeya dadantii Ech703]
gi|242129738|gb|ACS84040.1| gluconate transporter [Dickeya dadantii Ech703]
Length = 439
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A I+ + G ++ ++S+ A M L I+ + QV+++
Sbjct: 263 AVALFIAIVLAVFTLGLRGGRNMASVMDIVSDSIGAIAMILFIIAGGGAFK---QVLVD- 318
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L S LL+ + + +LL+IA+
Sbjct: 319 --SGVGQYIAELMKGSSLSPLLMCWTVAALLRIALGSA 354
>gi|297828379|ref|XP_002882072.1| hypothetical protein ARALYDRAFT_904117 [Arabidopsis lyrata subsp.
lyrata]
gi|297327911|gb|EFH58331.1| hypothetical protein ARALYDRAFT_904117 [Arabidopsis lyrata subsp.
lyrata]
Length = 148
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
I I H+ GM+ I+ DY+H + + + + F +++
Sbjct: 101 IPILFHIHEGMEEILADYVHQEMTRNLMVISLGLFQIIV 139
>gi|194335045|ref|YP_002016905.1| succinate dehydrogenase, cytochrome b556 subunit [Prosthecochloris
aestuarii DSM 271]
gi|194312863|gb|ACF47258.1| succinate dehydrogenase, cytochrome b556 subunit [Prosthecochloris
aestuarii DSM 271]
Length = 144
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGD-APYEQIVSVLSNVAVASIMGLGTISI 77
K G ++ R T + + ++ + D +E+ V++ N +
Sbjct: 29 KPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLSDPVRFEKYVTLYRNPLFKMAEVALLAVV 88
Query: 78 SVHMQLGMQVIIED 91
+ H G++++++D
Sbjct: 89 AFHAFNGIRILLQD 102
>gi|260907394|ref|ZP_05915716.1| succinate dehydrogenase cytochrome b subunit [Brevibacterium
linens BL2]
Length = 110
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R T + F++ + ++ Y ++ +A +I+ H
Sbjct: 4 WVAHRVTGVGIFFFLLVHVLDTALVRVSPEAYNAVIGTYKTPFMAIGEIALVAAIAFHAF 63
Query: 83 LGMQVIIEDY 92
G++VI+ D+
Sbjct: 64 NGLRVILVDF 73
>gi|110225697|ref|YP_665702.1| succinate:cytochrome c oxidoreductase subunit 4 [Mesostigma viride]
gi|17222568|gb|AAL36741.1|AF353999_21 succinate:cytochrome c oxidoreductase subunit 4 [Mesostigma viride]
Length = 80
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 22/97 (22%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVH 80
G+ + R+T IA + F V ++ L +S+H
Sbjct: 3 GSTTWRLLRYTTIALLILSFFLT----------------------VEKLVSLYFSIVSLH 40
Query: 81 MQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
LG+ I+EDYIH+ + + L +++
Sbjct: 41 SYLGIHEILEDYIHHEFTRKCCIVGIQLICLKIVLLS 77
>gi|195437791|ref|XP_002066823.1| GK24346 [Drosophila willistoni]
gi|194162908|gb|EDW77809.1| GK24346 [Drosophila willistoni]
Length = 1501
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS-VHMQL-GMQVII 89
+ A + ++ F+ I + + N I L + I +H + G Q+II
Sbjct: 1384 STALLAILLHFVFVSISFVHRDHAL---WQRNPFRNRIWSLTCLGILVIHGLICGTQLII 1440
Query: 90 EDYIHYRLLKIM 101
+D++ L +
Sbjct: 1441 DDFMQEHLTNLW 1452
>gi|237807001|ref|YP_002891441.1| gluconate transporter [Tolumonas auensis DSM 9187]
gi|237499262|gb|ACQ91855.1| gluconate transporter [Tolumonas auensis DSM 9187]
Length = 439
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A II I F + ++ ++S+ A M + I+ + QV+++
Sbjct: 263 AVALFVAIILAIFFLGMRNGKKIDSVMDIISDSIGAISMIMFIIAGGGAFK---QVLVD- 318
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I + S LL+ +C+ ++L+IA+
Sbjct: 319 --SGVGTYIADIMRGSSLSPLLMCWCVAAMLRIALGSA 354
>gi|242773784|ref|XP_002478309.1| succinate dehydrogenase subunit CybS, putative [Talaromyces
stipitatus ATCC 10500]
gi|218721928|gb|EED21346.1| succinate dehydrogenase subunit CybS, putative [Talaromyces
stipitatus ATCC 10500]
Length = 190
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A +P I + N + SI+ +
Sbjct: 84 SPSHGSYHWSFERLIAAGLVPLTI------APFVGGSL--------NPVMDSILAATLV- 128
Query: 77 ISVHMQLGMQVIIEDYIHYRLL-KIMFLFMNSCFVLLLIIF 116
+H +G Q +I DY+ + + K + LF L +
Sbjct: 129 --LHSHIGFQALIIDYLPEKRVPKTLALFKWGLRAATLAVA 167
>gi|196041884|ref|ZP_03109172.1| branched-chain amino acid transport system II carrier protein
[Bacillus cereus NVH0597-99]
gi|196027256|gb|EDX65875.1| branched-chain amino acid transport system II carrier protein
[Bacillus cereus NVH0597-99]
Length = 452
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 32 AIANIPFIIFFIAFF-----IKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQ 86
+ + P I+F I FF A IV + + +G+ I +H MQ
Sbjct: 119 GLGSTPLILFTIVFFSITCFFSLNPAKIVDIVGKILTPIKLTFIGILVIVAFIHPIGEMQ 178
Query: 87 VIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLFSL 121
V +E Y + K +L M++ + I + ++
Sbjct: 179 VPVEAYTSHAFFKGFQEGYLTMDTLASFVFGIIIINAI 216
>gi|11498292|ref|NP_069518.1| succinate dehydrogenase, subunit D (sdhD) [Archaeoglobus fulgidus
DSM 4304]
gi|14285413|sp|O29573|DHSD_ARCFU RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor
subunit
gi|2649930|gb|AAB90554.1| succinate dehydrogenase, subunit D (sdhD) [Archaeoglobus fulgidus
DSM 4304]
Length = 117
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 25 FIKQRFTAIANIPFII--FFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ Q T + I + F++ + Y ++V ++ ++ L +++S H
Sbjct: 16 WLMQMITGLLMILLVTAHFYVTHMTTHDALRYAEVVERVAQPEFKALYALLLLAVSFHAF 75
Query: 83 LGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIF 116
G++ I+ D + + K + + LL F
Sbjct: 76 NGLRAILLD-TNAGMRKKGAVSALTTLAFLLAFF 108
>gi|119963360|ref|YP_947031.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter
aurescens TC1]
gi|119950219|gb|ABM09130.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter
aurescens TC1]
Length = 126
Score = 34.3 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
++G ++ R T + F++ + ++ Y ++ N +A +
Sbjct: 13 REGMWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPLMALGETGLVAA 72
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSL--LKIAILG 128
I H G++VI D+ + K + L L+ F F++ L +A+ G
Sbjct: 73 IIFHAFNGLRVIAIDFW-KKGAKYQRQLLWVVLALWLVTFAGFAIRHLSLALGG 125
>gi|328951127|ref|YP_004368462.1| succinate dehydrogenase cytochrome b subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451451|gb|AEB12352.1| succinate dehydrogenase cytochrome b subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 131
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIAF---FIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + + + I G+ Y+ + LS L +H
Sbjct: 24 WVFMRISGLLLVFLALGHLYIQNILINAGEIDYDYVAKRLSQTTWKVYDWLLLALALLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIF 116
GM+ +I+D + ++ F + ++ I+F
Sbjct: 84 TNGMRYVIDDLVRNPAVR--FWVKTVFYTVVAILF 116
>gi|256380449|ref|YP_003104109.1| succinate dehydrogenase, cytochrome b556 subunit [Actinosynnema
mirum DSM 43827]
gi|255924752|gb|ACU40263.1| succinate dehydrogenase, cytochrome b556 subunit [Actinosynnema
mirum DSM 43827]
Length = 140
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + FF+ ++ Y+ ++ V ++
Sbjct: 29 WVAHRITGV----LTFFFLFVHVLDTALVRVSPNDYDAVIETYKTPLVNLFEVGLVGAVL 84
Query: 79 VHMQLGMQVIIEDY 92
H G++V++ D+
Sbjct: 85 YHALNGVRVMLVDF 98
>gi|149238373|ref|XP_001525063.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451660|gb|EDK45916.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 164
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 17/100 (17%)
Query: 18 AKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISI 77
A DG+ H+ R +IA +P + + ++ V I ++
Sbjct: 59 AYDGSYHWTYDRIISIAMVPLV-----------------MTPFVAGVEFPVIDATFSVLT 101
Query: 78 SVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
H G + I DYI R+ + +
Sbjct: 102 LFHCHAGFKSCIIDYIPKRVYNAWYGVATKLLTFGTCVAM 141
>gi|111220651|ref|YP_711445.1| succinate dehydrogenase membrane subunit [Frankia alni ACN14a]
gi|111148183|emb|CAJ59852.1| succinate dehydrogenase membrane subunit [Frankia alni ACN14a]
Length = 116
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIAF------FIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + + FF+ ++ + Y +++ V + V + ++
Sbjct: 4 WVAHRITGV----LVFFFLFAHVLDTALVRVSPSSYNEVIEVYKSPIVNLLEVGLVAAVL 59
Query: 79 VHMQLGMQVIIEDY 92
H G+++I+ D+
Sbjct: 60 FHALNGIRIILIDF 73
>gi|330506829|ref|YP_004383257.1| nitrogenase molybdenum-iron protein alpha chain [Methanosaeta
concilii GP-6]
gi|328927637|gb|AEB67439.1| nitrogenase molybdenum-iron protein alpha chain [Methanosaeta
concilii GP-6]
Length = 516
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLL 113
HM+ G Q++I+DY H +++ F +
Sbjct: 424 HMKDG-QIMIDDYSHQECERLVRELGVDLFCSGI 456
>gi|323301244|gb|ADX35964.1| LP01041p [Drosophila melanogaster]
Length = 1051
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 34 ANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG-TISISVHMQLG-MQVIIED 91
A + I+ F+ + + + N I + +H + +Q+++ED
Sbjct: 937 ALLGIILHFVFISVTFVHRDHAL---WQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLED 993
Query: 92 Y---IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + + L ++ LF S +L+ F
Sbjct: 994 FWVQLPNQWLALLILFGGSLLSMLVSELAKF 1024
>gi|317508113|ref|ZP_07965797.1| succinate dehydrogenase [Segniliparus rugosus ATCC BAA-974]
gi|316253624|gb|EFV13010.1| succinate dehydrogenase [Segniliparus rugosus ATCC BAA-974]
Length = 125
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ RFT +A F+ + I+ Y++++ + ++ H
Sbjct: 18 WVLHRFTGVAIFFFLFVHVLDTAIIQISPNLYDEVIGTYKTPLFGILEIGLFGAVLFHAL 77
Query: 83 LGMQVIIEDY----IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G++V++ D+ Y+ + + V + +F +L
Sbjct: 78 NGLRVVLVDFWSKGPRYQRTMLWAVGAVWLAVFAVAGGIMFYIL 121
>gi|291490747|gb|ADE06689.1| MIP18134p [Drosophila melanogaster]
Length = 830
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 34 ANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG-TISISVHMQLG-MQVIIED 91
A + I+ F+ + + + N I + +H + +Q+++ED
Sbjct: 716 ALLGIILHFVFISVTFVHRDHAL---WQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLED 772
Query: 92 Y---IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + + L ++ LF S +L+ F
Sbjct: 773 FWVQLPNQWLALLILFGGSLLSMLVSELAKF 803
>gi|19920678|ref|NP_608829.1| lethal (2) k05819, isoform B [Drosophila melanogaster]
gi|15291221|gb|AAK92879.1| GH12050p [Drosophila melanogaster]
gi|22945228|gb|AAN10345.1| lethal (2) k05819, isoform B [Drosophila melanogaster]
gi|220947164|gb|ACL86125.1| l(2)k05819-PB [synthetic construct]
Length = 1126
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 34 ANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG-TISISVHMQLG-MQVIIED 91
A + I+ F+ + + + N I + +H + +Q+++ED
Sbjct: 1012 ALLGIILHFVFISVTFVHRDHAL---WQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLED 1068
Query: 92 Y---IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + + L ++ LF S +L+ F
Sbjct: 1069 FWVQLPNQWLALLILFGGSLLSMLVSELAKF 1099
>gi|67517239|ref|XP_658500.1| hypothetical protein AN0896.2 [Aspergillus nidulans FGSC A4]
gi|40746769|gb|EAA65925.1| hypothetical protein AN0896.2 [Aspergillus nidulans FGSC A4]
Length = 171
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 17/90 (18%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A+ IP I + N +++ + +
Sbjct: 68 HGSYHWTFERLVAVGLIPLTI--------------APFAAGSLNPVTDAVLCSLLV---L 110
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCF 109
H +G Q I DY R + +N
Sbjct: 111 HSHVGFQASIIDYFPTRRVPKTSTLLNWLL 140
>gi|291086017|ref|ZP_06354641.2| gluconate transporter, permease protein [Citrobacter youngae ATCC
29220]
gi|291069160|gb|EFE07269.1| gluconate transporter, permease protein [Citrobacter youngae ATCC
29220]
Length = 450
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A I+ I + EQI+ ++ + A M + I+ + QV+++
Sbjct: 274 AVALFIAIVLAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFK---QVLVD- 329
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L + LL+ + + +LL+IA+
Sbjct: 330 --SGVGQYISHLMTGTSLSPLLMCWTVAALLRIALGSA 365
>gi|325090940|gb|EGC44250.1| succinate dehydrogenase cytochrome b small subunit [Ajellomyces
capsulatus H88]
Length = 203
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A +P I + ++ + +
Sbjct: 97 SPSHGSYHWTFERSVAVALVPLTI------APFAGGSVYPVMDAV-----------ICGT 139
Query: 77 ISVHMQLGMQVIIEDYIHY 95
+ +H +G Q I DYI
Sbjct: 140 LLMHSHIGFQACIIDYIPA 158
>gi|154282755|ref|XP_001542173.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
capsulatus NAm1]
gi|150410353|gb|EDN05741.1| succinate dehydrogenase membrane anchor subunit [Ajellomyces
capsulatus NAm1]
Length = 203
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A +P I + ++ + +
Sbjct: 97 SPSHGSYHWTFERSVAVALVPLTI------APFAGGSVYPVMDAV-----------ICGT 139
Query: 77 ISVHMQLGMQVIIEDYIHY 95
+ +H +G Q I DYI
Sbjct: 140 LLMHSHIGFQACIIDYIPA 158
>gi|328884580|emb|CCA57819.1| Succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces venezuelae ATCC 10712]
Length = 159
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM---FLFMNSCF 109
+ + ++ L +H G++ +I DY ++ L+ + F
Sbjct: 83 GFAFVAGRWASPFWQVWDLLMLWLAMLHGANGLRTVINDYAERANTRLWLKGLLYTATVF 142
Query: 110 VLLLIIFCLF 119
+LL +F
Sbjct: 143 TILLGTLVIF 152
>gi|282860945|ref|ZP_06270011.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp.
ACTE]
gi|282564681|gb|EFB70217.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp.
ACTE]
Length = 126
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPLVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G++++ D+ + L+ ++L++ L+ +L
Sbjct: 66 LVAAILFHALNGLRIVAVDFWAKGPRHQKTMLWTVLGIWIVLMVGALYPVL 116
>gi|259488818|tpe|CBF88571.1| TPA: succinate dehydrogenase subunit CybS, putative
(AFU_orthologue; AFUA_1G15590) [Aspergillus nidulans
FGSC A4]
Length = 167
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 17/90 (18%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G+ H+ +R A+ IP I + N +++ + +
Sbjct: 64 HGSYHWTFERLVAVGLIPLTI--------------APFAAGSLNPVTDAVLCSLLV---L 106
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCF 109
H +G Q I DY R + +N
Sbjct: 107 HSHVGFQASIIDYFPTRRVPKTSTLLNWLL 136
>gi|326481906|gb|EGE05916.1| succinate dehydrogenase cytochrome b small subunit [Trichophyton
equinum CBS 127.97]
Length = 177
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I AP+ +S V A + G I
Sbjct: 71 SPTHGSYHWTFERVVAASLIPLTI-----------APFAS--GSVSPVLDAVLCGTLVI- 116
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC---FVLLLII 115
H +G Q +I DY + F+N F L +
Sbjct: 117 ---HSHIGFQAMIADYFRPWRVPKTSAFLNWLLRGFTLATAV 155
>gi|326473398|gb|EGD97407.1| succinate dehydrogenase cytochrome b small subunit [Trichophyton
tonsurans CBS 112818]
Length = 177
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I AP+ +S V A + G I
Sbjct: 71 SPTHGSYHWTFERVVAASLIPLTI-----------APFAS--GSVSPVLDAVLCGTLVI- 116
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC---FVLLLII 115
H +G Q +I DY + F+N F L +
Sbjct: 117 ---HSHIGFQAMIADYFRPWRVPKTSAFLNWLLRGFTLATAV 155
>gi|297565865|ref|YP_003684837.1| succinate dehydrogenase membrane subunit SdhD [Meiothermus silvanus
DSM 9946]
gi|296850314|gb|ADH63329.1| succinate dehydrogenase, membrane subunit (SdhD) [Meiothermus
silvanus DSM 9946]
Length = 130
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 25 FIKQRFTAIANIPFI---IFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
++ R + + + + I+ I Y+ + LSN + +H
Sbjct: 24 WVFMRLSGLVLVFLVLGHIYMNFVLIDVNTINYDYVARRLSNTTWKIYDLVILGLALLHG 83
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
G + +++D+I + + + +L+ + SLL
Sbjct: 84 LNGSRYVMDDWIKDPSRRFITKAVVYSLGVLVFLIGSISLL 124
>gi|328353344|emb|CCA39742.1| hypothetical protein PP7435_Chr3-0789 [Pichia pastoris CBS 7435]
Length = 753
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 23/104 (22%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
G H+ ++ IA IP FI F A Y + S+ S ++
Sbjct: 650 HGGYHWTYEKIITIAMIPL---FITPFA--AGAEYPLVDSIFS-----VLLV-------F 692
Query: 80 HMQLGMQVIIEDYIH----YRLLKIMFLFMNSCFVLLLIIFCLF 119
H + G + I DYI K+ +++ L ++ ++
Sbjct: 693 HCRAGFESCIIDYIPKRVYGVWHKMALYLLDA--ATGLSLYGVY 734
>gi|323489945|ref|ZP_08095166.1| succinate dehydrogenase, cytochrome b558 subunit [Planococcus
donghaensis MPA1U2]
gi|323396241|gb|EGA89066.1| succinate dehydrogenase, cytochrome b558 subunit [Planococcus
donghaensis MPA1U2]
Length = 204
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 25 FIKQRFTAIANIPFIIF------FIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
FI QR+T + + FI + F +A + + ++LSN + + +G +S +
Sbjct: 96 FIAQRYTGVFLVVFIAWHVFETRFQVAIGNAAEADFNMMENILSNPWMLAFYIVGVLSAT 155
Query: 79 VHMQLGMQ 86
H+ G+
Sbjct: 156 FHLSNGLW 163
>gi|327294942|ref|XP_003232166.1| succinate dehydrogenase cytochrome b small subunit [Trichophyton
rubrum CBS 118892]
gi|326465338|gb|EGD90791.1| succinate dehydrogenase cytochrome b small subunit [Trichophyton
rubrum CBS 118892]
Length = 177
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I AP+ +S V A + G I
Sbjct: 71 SPTHGSYHWTFERVVAASLIPLTI-----------APFAS--GSVSPVLDAVLCGTLVI- 116
Query: 77 ISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC---FVLLLII 115
H +G Q +I DY + F+N F L +
Sbjct: 117 ---HSHIGFQAMIADYFRPWRVPKTSAFLNWLLRGFTLATAV 155
>gi|159900301|ref|YP_001546548.1| hypothetical protein Haur_3784 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893340|gb|ABX06420.1| hypothetical protein Haur_3784 [Herpetosiphon aurantiacus ATCC
23779]
Length = 133
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 21 GTGHFIKQRFTAIANIPFIIFFIAFF----IKYGDAPYEQIVSVLSNVAVASIM--GLGT 74
GT +I QR ++ + F+ + F + Y + S + ++ GL
Sbjct: 23 GTLLWILQRLSSYGLLLFLPIHLYFTYFTKLDTPALTYNGMRETFSAFPLWYVLNEGLLL 82
Query: 75 ISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIA 125
I H G + +I D+ ++ F+ + I ++L +A
Sbjct: 83 ICALFHGLNGFRNVIYDWTTNSAVRHTVNFLLIVLGIAGAILGFWTLWALA 133
>gi|255630641|gb|ACU15680.1| unknown [Glycine max]
Length = 200
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 21/53 (39%)
Query: 56 QIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSC 108
+ S+L + + H+ G+ I+ DY+H+ + + + C
Sbjct: 147 AVASLLLIYPNTYSLLFANFFVFWHLYAGIGEILADYVHHEMTREFVMISLGC 199
>gi|311896443|dbj|BAJ28851.1| putative succinate dehydrogenase hydrophobic membrane anchor
protein [Kitasatospora setae KM-6054]
Length = 162
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 25 FIKQRFTAIANIPFIIFFIAFFIKYGDA----PYEQIVSVLSNVAVASIMGLGTISISVH 80
++ R + + + ++ + + + + ++ L +H
Sbjct: 55 WLFMRLSGVVLVVLVLGHLLINLMLDGGVSKVSFAFVAGRWASPFWQFWDLLMLWLAMLH 114
Query: 81 MQLGMQVIIEDYIHYRLLKIM---FLFMNSCFVLLLIIFCLF 119
GM+ +I DY ++ L + + F ++L +F
Sbjct: 115 GSNGMRTVINDYAEKDATRLWLKGLLGVATVFTVVLGTLVIF 156
>gi|239929336|ref|ZP_04686289.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis
ATCC 14672]
gi|291437669|ref|ZP_06577059.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces ghanaensis ATCC 14672]
gi|291340564|gb|EFE67520.1| succinate dehydrogenase hydrophobic membrane anchor protein
[Streptomyces ghanaensis ATCC 14672]
Length = 160
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 53 PYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIM---FLFMNSCF 109
+ + ++ L +H G++ +I DY ++ L+ + F
Sbjct: 84 GFAFVAGRWASPFWQVWDLLMLWLAMLHGANGLRTVINDYAERPNTRLWLKGLLYTATVF 143
Query: 110 VLLLIIFCLF 119
+LL +F
Sbjct: 144 TILLGTLVIF 153
>gi|213162829|ref|ZP_03348539.1| transporter, gluconate:H+ symporter (GntP) family protein
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213618566|ref|ZP_03372392.1| transporter, gluconate:H+ symporter (GntP) family protein
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650364|ref|ZP_03380417.1| transporter, gluconate:H+ symporter (GntP) family protein
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
Length = 496
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A II I + EQ++ ++ A M + I+ + QV+++
Sbjct: 320 AVALFIAIIIAIFTLGRRNGRTVEQVMDIVGESIGAIAMIVFIIAGGGAFK---QVLVD- 375
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L + LL+ + + ++L+IA+
Sbjct: 376 --SGVGQYISQLMTGTSLSPLLMCWTVAAVLRIALGSA 411
>gi|240274606|gb|EER38122.1| succinate dehydrogenase cytochrome b small subunit [Ajellomyces
capsulatus H143]
Length = 134
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A+A +P I + ++ + +
Sbjct: 28 SPSHGSYHWTFERSVAVALVPLTI------APFAGGSVYPVMDAV-----------ICGT 70
Query: 77 ISVHMQLGMQVIIEDYIHY 95
+ +H +G Q I DYI
Sbjct: 71 LLMHSHIGFQACIIDYIPA 89
>gi|213427632|ref|ZP_03360382.1| transporter, gluconate:H+ symporter (GntP) family protein
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
Length = 496
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A II I + EQ++ ++ A M + I+ + QV+++
Sbjct: 320 AVALFIAIIIAIFTLGRRNGRTVEQVMDIVGESIGAIAMIVFIIAGGGAFK---QVLVD- 375
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L + LL+ + + ++L+IA+
Sbjct: 376 --SGVGQYISQLMTGTSLSPLLMCWTVAAVLRIALGSA 411
>gi|11465634|ref|NP_049305.1| succinate:cytochrome c oxidoreductase subunit 4 [Porphyra purpurea]
gi|1706430|sp|P80479|DHSD_PORPU RecName: Full=Succinate dehydrogenase membrane anchor subunit;
AltName: Full=Succinate dehydrogenase, subunit IV
gi|4106941|gb|AAD03108.1| succinate:cytochrome c oxidoreductase subunit 4 [Porphyra purpurea]
Length = 95
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 69 IMGLGTISISVHMQLGMQVIIEDYIHYRLLKI 100
I+ L I +H LG+ VIIEDYIH +K
Sbjct: 42 ILFLFHPIILLHASLGLSVIIEDYIHIETIKF 73
>gi|256425691|ref|YP_003126344.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Chitinophaga
pinensis DSM 2588]
gi|256040599|gb|ACU64143.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Chitinophaga
pinensis DSM 2588]
Length = 196
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 43 IAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMF 102
+ + Y+++ A ++G+ ++ HM LGM+ I DY+H ++
Sbjct: 139 VFKLCRQEGKSYDEV---------ALLLGISRNAVKKHMVLGMR-FIYDYVHRHGDILLA 188
Query: 103 LFM 105
+++
Sbjct: 189 IYL 191
>gi|182436480|ref|YP_001824199.1| putative succinate dehydrogenase membrane subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326777101|ref|ZP_08236366.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
cf. griseus XylebKG-1]
gi|178464996|dbj|BAG19516.1| putative succinate dehydrogenase membrane subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326657434|gb|EGE42280.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
cf. griseus XylebKG-1]
Length = 126
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+++V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G+++I D+
Sbjct: 66 LVAAILFHALNGLRIIAVDF 85
>gi|72123766|ref|XP_792876.1| PREDICTED: similar to succinate dehydrogenase cytochrome B small
subunit precursor [Strongylocentrotus purpuratus]
gi|115653471|ref|XP_001199802.1| PREDICTED: similar to succinate dehydrogenase cytochrome B small
subunit precursor [Strongylocentrotus purpuratus]
Length = 148
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 31/107 (28%)
Query: 22 TGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHM 81
+ H+ +R +I I I AF I+ Y S+ +H
Sbjct: 52 SKHWNAERVLSIGLIGIIP--AAFLIQNPALDYALAA-----------------SLVLHG 92
Query: 82 QLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILG 128
GM+ + DY+H + + LF++ ++ G
Sbjct: 93 HWGMEQVFLDYVHGETMSK------------VANASLFAISALSFAG 127
>gi|291447202|ref|ZP_06586592.1| succinate dehydrogenase membrane subunit [Streptomyces roseosporus
NRRL 15998]
gi|291350149|gb|EFE77053.1| succinate dehydrogenase membrane subunit [Streptomyces roseosporus
NRRL 15998]
Length = 126
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY-IHYRLLKIMFLFMNSCFVLLLIIFCLFSLL 122
+I H G+++I D+ L+ L+ ++L++ L+ +L
Sbjct: 66 LVAAILFHALNGLRIIAVDFWAKGPRLQKQMLWTVLGIWIVLMVGALYPVL 116
>gi|320008969|gb|ADW03819.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 126
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 19 KDGTGHFIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGL 72
++G ++ R T + I FF+ ++ Y+ +V+ VA +
Sbjct: 10 REGMWSWVAHRVTGV----LIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPLVALLEYG 65
Query: 73 GTISISVHMQLGMQVIIEDY 92
+I H G++++ D+
Sbjct: 66 LVAAILFHALNGLRIVAVDF 85
>gi|24581633|ref|NP_722974.1| lethal (2) k05819, isoform A [Drosophila melanogaster]
gi|22945227|gb|AAF51018.3| lethal (2) k05819, isoform A [Drosophila melanogaster]
gi|54650592|gb|AAV36875.1| RE54461p [Drosophila melanogaster]
Length = 1449
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 34 ANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLG-TISISVHMQLG-MQVIIED 91
A + I+ F+ + + + N I + +H + +Q+++ED
Sbjct: 1335 ALLGIILHFVFISVTFVHRDHAL---WQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLED 1391
Query: 92 Y---IHYRLLKIMFLFMNSCFVLLLIIFCLF 119
+ + + L ++ LF S +L+ F
Sbjct: 1392 FWVQLPNQWLALLILFGGSLLSMLVSELAKF 1422
>gi|257054607|ref|YP_003132439.1| succinate dehydrogenase subunit C [Saccharomonospora viridis DSM
43017]
gi|256584479|gb|ACU95612.1| succinate dehydrogenase subunit C [Saccharomonospora viridis DSM
43017]
Length = 116
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 25 FIKQRFTAIANIPFIIFFIA------FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISIS 78
++ R T + FF+ ++ Y+ I+ N V + ++
Sbjct: 4 WVLHRITGV----LTFFFLFVHVLDTALVRVSPNTYDAIIETYKNPIVNLMEVGLVGAVL 59
Query: 79 VHMQLGMQVIIEDY 92
H G++VI+ D+
Sbjct: 60 YHALNGIRVILVDF 73
>gi|225677592|gb|EEH15876.1| TIM22 inner membrane protein import complex anchor subunit Tim18
[Paracoccidioides brasiliensis Pb03]
Length = 198
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 17/76 (22%)
Query: 17 SAKDGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTIS 76
S G+ H+ +R A + IP I + + + +
Sbjct: 92 SPSHGSYHWTFERIIAASLIPLTI------APFAGGS-----------LNPVMDAVFCGT 134
Query: 77 ISVHMQLGMQVIIEDY 92
I +H +G Q I DY
Sbjct: 135 ILMHSHIGFQACIIDY 150
>gi|25026942|ref|NP_736996.1| putative succinate dehydrogenase subunit C [Corynebacterium
efficiens YS-314]
gi|23492222|dbj|BAC17196.1| putative succinate dehydrogenase subunit C [Corynebacterium
efficiens YS-314]
Length = 257
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 51 DAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDYIHYRLLKIMFLFMNSCFV 110
A Y +++ S VA + + + VH+ G+ V + D L + V
Sbjct: 177 GAVYANLIATFSRWPVAIWYIIANLVLFVHLSHGIWVAVSDLGITGRRWRAILLAVAYIV 236
Query: 111 LLLIIFCLFSL-LKIAIL 127
L++ S+ L IA+
Sbjct: 237 PALVLIGNVSIPLVIALG 254
>gi|295311710|ref|YP_003587375.1| succinate dehydrogenase subunit 4 [Cucurbita pepo]
gi|259156838|gb|ACV96699.1| succinate dehydrogenase subunit 4 [Cucurbita pepo]
Length = 128
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
Query: 28 QRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQV 87
QR TA +P II Y+++ S L +S+ H+ G++
Sbjct: 45 QRITAAFLLPLIII------------YKKVSSTF----------LPNLSVFWHINSGIEE 82
Query: 88 IIEDYIHYRLLKIMFLFMNSCFVLLL 113
I+ D++H + + L F+L++
Sbjct: 83 IMADHVHQEMTRNWILVYLRLFLLIV 108
>gi|301028104|ref|ZP_07191382.1| transporter, gluconate:H+ symporter family protein [Escherichia
coli MS 196-1]
gi|299878821|gb|EFI87032.1| transporter, gluconate:H+ symporter family protein [Escherichia
coli MS 196-1]
Length = 423
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 AIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIED 91
A+A I+ I + EQI+ ++ + A M + I+ + QV+++
Sbjct: 247 AVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFK---QVLVD- 302
Query: 92 YIHYRLLKIMFLFMNSCFVLLLIIFCLFSLLKIAILGT 129
I L + LL+ + + +LL+IA+
Sbjct: 303 --SGVGHYISHLMTGTTLSPLLMCWTVAALLRIALGSA 338
>gi|169630752|ref|YP_001704401.1| succinate dehydrogenase (cytochrome b-556 subunit) SdhC
[Mycobacterium abscessus ATCC 19977]
gi|169242719|emb|CAM63747.1| Probable succinate dehydrogenase (cytochrome b-556 subunit) SdhC
[Mycobacterium abscessus]
Length = 140
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 25 FIKQRFTAIANIPFIIFFIA--FFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQ 82
++ R T F+ + ++ Y ++ V + ++ H
Sbjct: 32 WVLHRITGATIFFFLFVHVLDTALVRVSPESYNSVIETYKTPIVGLMELGLVAAVLYHAL 91
Query: 83 LGMQVIIEDY 92
G++VI+ D+
Sbjct: 92 NGVRVILVDF 101
>gi|68488400|ref|XP_711938.1| hypothetical protein CaO19.11949 [Candida albicans SC5314]
gi|46433286|gb|EAK92732.1| hypothetical protein CaO19.11949 [Candida albicans SC5314]
Length = 172
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 12/98 (12%)
Query: 20 DGTGHFIKQRFTAIANIPFIIFFIAFFIKYGDAPYEQIVSVLSNVAVASIMGLGTISISV 79
+G+ H+ +R AI +P ++ G ++ + S M +
Sbjct: 64 EGSLHWTSERIVAIGMLPLVLAPFITGGGVG---------GGASTLIDSTMSALLL---F 111
Query: 80 HMQLGMQVIIEDYIHYRLLKIMFLFMNSCFVLLLIIFC 117
H G Q I DY+ R+ + I
Sbjct: 112 HCHTGFQSCIIDYVPKRVYGSYHNYAMYLLTFGTGIAG 149
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.321 0.175 0.575
Lambda K H
0.267 0.0537 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,893,384,889
Number of Sequences: 14124377
Number of extensions: 130043860
Number of successful extensions: 891418
Number of sequences better than 10.0: 2605
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 1845
Number of HSP's that attempted gapping in prelim test: 888671
Number of HSP's gapped (non-prelim): 3536
length of query: 130
length of database: 4,842,793,630
effective HSP length: 96
effective length of query: 34
effective length of database: 3,486,853,438
effective search space: 118553016892
effective search space used: 118553016892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.6 bits)
S2: 76 (33.5 bits)