HHsearch alignment for GI: 254781043 and conserved domain: COG0445
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning].
Probab=99.18 E-value=2.6e-11 Score=92.59 Aligned_cols=151 Identities=31% Similarity=0.431 Sum_probs=81.6
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC--CCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf 10588989968999999999988982999986898852--1041165342513789999999999989984588779999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRS--HTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA 94 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g--~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l 94 (611)
T Consensus 4 ~~DVIVIGgGHAG~EAA~AaARmG~ktlLlT~~~dtig~msCNPaIGG~~K--G~lvr------EIDAL--G-G~----- 67 (621)
T COG0445 4 EYDVIVIGGGHAGVEAALAAARMGAKTLLLTLNLDTIGEMSCNPAIGGPGK--GHLVR------EIDAL--G-GL----- 67 (621)
T ss_pred CCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCC--CEEEE------EEHHC--C-CH-----
T ss_conf 785699899842047777664369807999737774465035644577355--32677------52412--4-55-----
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH-CCCEEEC
Q ss_conf 999999889999999986998132799855100146411456787656407986665426678999999873-1230311
Q gi|254781043|r 95 IQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALK-NNAEFFI 173 (611)
Q Consensus 95 v~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~-~gv~i~~ 173 (611)
T Consensus 68 Mg-------~---~~D~~~IQ~r~---------------LN~sKGPAVra~RaQaDk--~~Y~~~mk~~le~~~NL~l~q 120 (621)
T COG0445 68 MG-------K---AADKAGIQFRM---------------LNSSKGPAVRAPRAQADK--WLYRRAMKNELENQPNLHLLQ 120 (621)
T ss_pred HH-------H---HHHHCCCCHHH---------------CCCCCCCHHCCHHHHHHH--HHHHHHHHHHHHCCCCCEEHH
T ss_conf 77-------7---66650786533---------------367776210450654428--999999999985499955247
Q ss_pred CCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCC
Q ss_conf 3156520001344301246898058708995067247415765
Q gi|254781043|r 174 EYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGY 216 (611)
Q Consensus 174 ~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~ 216 (611)
T Consensus 121 -~~v~dli~e~~~~v~GV~t---~~G~--~~~a~aVVlTTGTF 157 (621)
T COG0445 121 -GEVEDLIVEEGQRVVGVVT---ADGP--EFHAKAVVLTTGTF 157 (621)
T ss_pred -HHHHHHHHCCCCEEEEEEE---CCCC--EEECCEEEEEECCC
T ss_conf -6667871337976899992---7878--51068799963344