HHsearch alignment for GI: 254781043 and conserved domain: KOG1298
>KOG1298 consensus.
Probab=98.87 E-value=2.1e-08 Score=73.50 Aligned_cols=189 Identities=21% Similarity=0.225 Sum_probs=115.4
Q ss_pred EEEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf 32310588989968999999999988982999986898852104116534251378999999999998998458877999
Q gi|254781043|r 14 VDHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVD 93 (611)
Q Consensus 14 ~d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~ 93 (611)
T Consensus 42 ~~~~~DvIIVGAGV~GsaLa~~L~kdGRrVhVIERDl~----------------------EPdRivGEllQPGG~~~L~~ 99 (509)
T KOG1298 42 NDGAADVIIVGAGVAGSALAYALAKDGRRVHVIERDLS----------------------EPDRIVGELLQPGGYLALSK 99 (509)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCC----------------------CCHHHHHHHCCCCHHHHHHH
T ss_conf 68754479988862278999998507857999963455----------------------61678877608506689987
Q ss_pred HHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-CC
Q ss_conf 9999999889999999986---9981327998551001464114567876564079866654266789999998731-23
Q gi|254781043|r 94 AIQYLAMEAPQSVYELEHY---GVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKN-NA 169 (611)
Q Consensus 94 lv~~~~~~a~~~i~~Le~~---Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~-gv 169 (611)
T Consensus 100 L---Gl---~Dcve~IDAQ~v~Gy~if--k~gk~v~~pyP~--~~f~-~d~~GrsFhn----GR-Fvq~lR~ka~slpNV 163 (509)
T KOG1298 100 L---GL---EDCVEGIDAQRVTGYAIF--KDGKEVDLPYPL--KNFP-SDPSGRSFHN----GR-FVQRLRKKAASLPNV 163 (509)
T ss_pred H---CH---HHHHHCCCCEEEEEEEEE--ECCCEEECCCCC--CCCC-CCCCCCEEEC----CH-HHHHHHHHHHCCCCE
T ss_conf 0---87---877632022375226998--479355335777--6788-8743201223----69-999999987248970
Q ss_pred EEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCC-CEECCHHHHHHHHHCCCCCCCC
Q ss_conf 031131565200013443012468980587089950672474157656543342106-4014448878875136533332
Q gi|254781043|r 170 EFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSA-HTCTGDGAGMVARAGLPLQDME 248 (611)
Q Consensus 170 ~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~-~~~tGdG~~mA~~aGa~l~~mE 248 (611)
T Consensus 164 ~~e-eGtV~sLlee-~gvvkGV~yk~k~gee-~~~~ApLTvVCDGcfSnlRr-sL~~~~v~~----V~S~fVG~vl~N~~ 235 (509)
T KOG1298 164 RLE-EGTVKSLLEE-EGVVKGVTYKNKEGEE-VEAFAPLTVVCDGCFSNLRR-SLCDPKVEE----VPSYFVGLVLKNCR 235 (509)
T ss_pred EEE-EEEHHHHHHC-CCEEEEEEEECCCCCE-EEEECCEEEEECCHHHHHHH-HHCCCCCCC----CCHHEEEEEECCCC
T ss_conf 886-1027878731-6859758986278855-78735558994125688898-744876453----30231244522788