HHsearch alignment for GI: 254781043 and conserved domain: KOG2853
>KOG2853 consensus.
Probab=98.40 E-value=7.1e-06 Score=57.02 Aligned_cols=193 Identities=17% Similarity=0.255 Sum_probs=101.7
Q ss_pred CCEEEEEECEEEECCCHHHHHHHHHHHH----CCCCEEEEECCCCCC-CCCHHCCCCEEEECCCCCCCCHH--HHHHHHH
Q ss_conf 4133231058898996899999999998----898299998689885-21041165342513789999999--9999899
Q gi|254781043|r 11 YTYVDHSYDVVVVGAGGAGLRATLGMAE----KGFKTACITKVFPTR-SHTVAAQGGIAASLANMTPDSWQ--WHLYDTI 83 (611)
Q Consensus 11 ~~~~d~~~DVlVIG~G~AGl~AAi~A~e----~G~~V~lieK~~~~~-g~s~~A~GGi~a~~~~~~~Ds~~--~~~~Dt~ 83 (611)
T Consensus 80 ~~~f~~~~dVvIIGGG~~GsS~AfWLKer~rd~gl~VvVVErddtytqssT~lSvGGi~QQFS--lpEnIqmSLF~a~Fl 157 (509)
T KOG2853 80 NEVFPYHCDVVIIGGGGSGSSTAFWLKERARDEGLNVVVVERDDTYTQSSTMLSVGGICQQFS--LPENIQMSLFTAEFL 157 (509)
T ss_pred CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCEEEECC--CCHHHHHHHHHHHHH
T ss_conf 655544367899888865226589998876437943999962675210011455544433214--610011356799999
Q ss_pred HHC-CC--------------------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 845-88--------------------779999999999889999999986998132799855100146411456787656
Q gi|254781043|r 84 KGS-DW--------------------LGDVDAIQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPV 142 (611)
Q Consensus 84 ~~g-~~--------------------l~d~~lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~ 142 (611)
T Consensus 158 r~a~ehl~~~d~~~vdl~f~P~GyL~LA~ee~ae~m~s~~----kvQ~e~GAk~eLls~d~Lt~-rfP-----wlntegV 227 (509)
T KOG2853 158 RNAREHLGILDSEQVDLNFFPTGYLRLASEEEAEMMRSNS----KVQNELGAKVELLSPDELTK-RFP-----WLNTEGV 227 (509)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH----HHHHHHCCHHCCCCHHHHHH-HCC-----CCCCCCE
T ss_conf 8777763536677887004777048970502489987757----88776353000348788763-287-----3133562
Q ss_pred CEEEEE----CCCCCHHHHHHHHHHHHHCCCEEECC---------CEEEEEEECCCC-------CCEEEEEEEECCCEEE
Q ss_conf 407986----66542667899999987312303113---------156520001344-------3012468980587089
Q gi|254781043|r 143 QRTCAA----ADRTGHAILHTLYGQALKNNAEFFIE---------YFALDLIINSEG-------CCVGVVAWQLETGEIH 202 (611)
Q Consensus 143 ~R~~~~----~d~tG~~i~~~L~~~~~~~gv~i~~~---------~~~~~Li~d~dG-------~V~Gav~~~~~~G~~~ 202 (611)
T Consensus 228 aLa~lG~e~EGwfdpw~LLs~~rrk~~~lGv~f~~GeV~~Fef~sqr~v~~~tD-d~t~~~~~~~i~~vvV~-m~d~~~r 305 (509)
T KOG2853 228 ALASLGVEKEGWFDPWALLSGIRRKAITLGVQFVKGEVVGFEFESQRAVHAFTD-DGTAKLRAQRISGVVVR-MNDALAR 305 (509)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCEEEEEEEECCCCEEEECC-CCHHHHHHCCCCEEEEE-CCCHHCC
T ss_conf 332024453566577999998888765313067423588789703110465325-63244554022203785-6740027
Q ss_pred EECCCCEEEECCCCC
Q ss_conf 950672474157656
Q gi|254781043|r 203 RFSAKLVVLATGGYG 217 (611)
Q Consensus 203 ~i~AkaVILATGG~~ 217 (611)
T Consensus 306 ~vk~al~V~aAGa~s 320 (509)
T KOG2853 306 PVKFALCVNAAGAWS 320 (509)
T ss_pred CEEEEEEEECCCCCH
T ss_conf 324788985267317