HHsearch alignment for GI: 254781043 and conserved domain: PRK00711
>PRK00711 D-amino acid dehydrogenase small subunit; Validated.
Probab=99.44 E-value=2.6e-12 Score=99.11 Aligned_cols=189 Identities=17% Similarity=0.211 Sum_probs=97.4
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCHHCCCCEEEEC----CC-----------CCCC---------C
Q ss_conf 88989968999999999988982999986898-8521041165342513----78-----------9999---------9
Q gi|254781043|r 20 VVVVGAGGAGLRATLGMAEKGFKTACITKVFP-TRSHTVAAQGGIAASL----AN-----------MTPD---------S 74 (611)
Q Consensus 20 VlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~-~~g~s~~A~GGi~a~~----~~-----------~~~D---------s 74 (611)
T Consensus 3 VvIIGaGi~G~stA~~La~~G~~V~vler~~~~~~~~S~~naG~i~~~~~~p~~~pg~~~~~~~~l~~~~~pl~~~~~~~ 82 (416)
T PRK00711 3 VVVLGSGVVGVTSAWYLARAGHEVTVIDRQPGPALETSFANAGQISPGYAAPWAAPGVPLKAIKWLFQRHAPLAIRPDGD 82 (416)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCC
T ss_conf 99999449999999999968996899969999853135134600164213564576427888888627898706257769
Q ss_pred HHH--HHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCEEEE---------------------
Q ss_conf 999--9998998458---8779999999999889999999-986998132799855100---------------------
Q gi|254781043|r 75 WQW--HLYDTIKGSD---WLGDVDAIQYLAMEAPQSVYEL-EHYGVPFSRNEAGKIYQR--------------------- 127 (611)
Q Consensus 75 ~~~--~~~Dt~~~g~---~l~d~~lv~~~~~~a~~~i~~L-e~~Gv~f~r~~~G~~~~~--------------------- 127 (611)
T Consensus 83 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~la~~s~~~~~~l~~~~g~~~~~~~~G~l~l~~~~~~~~~~~~~~~~~~~~G~ 162 (416)
T PRK00711 83 PFQLRWMWQMLRNCTASRYAVNKGRMVRLAEYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIAVLEEAGV 162 (416)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHCCC
T ss_conf 78879999999855887899999999999999899999999864997101527689996799999999999999998699
Q ss_pred ------------CCCCCCCCCCCCCCCCEEEEE-CCCC--CHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEE
Q ss_conf ------------146411456787656407986-6654--2667899999987312303113156520001344301246
Q gi|254781043|r 128 ------------PFGGHMQNYGEGPPVQRTCAA-ADRT--GHAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVV 192 (611)
Q Consensus 128 ------------~~gg~~~~~~~g~~~~R~~~~-~d~t--G~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav 192 (611)
T Consensus 163 ~~e~l~~~e~~~~~P~l~~---~~~~~~Ga~~~p~d~~~d~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v~~V~ 238 (416)
T PRK00711 163 PYELLDRDELAAVEPALAG---VRHKLAGGLRLPNDETGDCQLFTQRLAALAEQLGVKFRFNTPVDGLLVEG-GRITGVQ 238 (416)
T ss_pred CEEEECHHHHHHHCCCCCC---CCCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC-CEEEEEE
T ss_conf 7399689999874651015---55547899996898706679999999999985388620023158999849-9899885
Q ss_pred EEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 89805870899506724741576565
Q gi|254781043|r 193 AWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 193 ~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 239 t---~~g---~i~ad~vV~AaGaws~ 258 (416)
T PRK00711 239 T---GGG---VITADAYVVALGSYST 258 (416)
T ss_pred C---CCC---EEEEEEEEEECCHHHH
T ss_conf 3---895---5750169993374369