HHsearch alignment for GI: 254781043 and conserved domain: PRK00711

>PRK00711 D-amino acid dehydrogenase small subunit; Validated.
Probab=99.44  E-value=2.6e-12  Score=99.11  Aligned_cols=189  Identities=17%  Similarity=0.211  Sum_probs=97.4

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCHHCCCCEEEEC----CC-----------CCCC---------C
Q ss_conf             88989968999999999988982999986898-8521041165342513----78-----------9999---------9
Q gi|254781043|r   20 VVVVGAGGAGLRATLGMAEKGFKTACITKVFP-TRSHTVAAQGGIAASL----AN-----------MTPD---------S   74 (611)
Q Consensus        20 VlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~-~~g~s~~A~GGi~a~~----~~-----------~~~D---------s   74 (611)
T Consensus         3 VvIIGaGi~G~stA~~La~~G~~V~vler~~~~~~~~S~~naG~i~~~~~~p~~~pg~~~~~~~~l~~~~~pl~~~~~~~   82 (416)
T PRK00711          3 VVVLGSGVVGVTSAWYLARAGHEVTVIDRQPGPALETSFANAGQISPGYAAPWAAPGVPLKAIKWLFQRHAPLAIRPDGD   82 (416)
T ss_pred             EEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCC
T ss_conf             99999449999999999968996899969999853135134600164213564576427888888627898706257769


Q ss_pred             HHH--HHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCEEEE---------------------
Q ss_conf             999--9998998458---8779999999999889999999-986998132799855100---------------------
Q gi|254781043|r   75 WQW--HLYDTIKGSD---WLGDVDAIQYLAMEAPQSVYEL-EHYGVPFSRNEAGKIYQR---------------------  127 (611)
Q Consensus        75 ~~~--~~~Dt~~~g~---~l~d~~lv~~~~~~a~~~i~~L-e~~Gv~f~r~~~G~~~~~---------------------  127 (611)
T Consensus        83 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~la~~s~~~~~~l~~~~g~~~~~~~~G~l~l~~~~~~~~~~~~~~~~~~~~G~  162 (416)
T PRK00711         83 PFQLRWMWQMLRNCTASRYAVNKGRMVRLAEYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIAVLEEAGV  162 (416)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHCCC
T ss_conf             78879999999855887899999999999999899999999864997101527689996799999999999999998699


Q ss_pred             ------------CCCCCCCCCCCCCCCCEEEEE-CCCC--CHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEE
Q ss_conf             ------------146411456787656407986-6654--2667899999987312303113156520001344301246
Q gi|254781043|r  128 ------------PFGGHMQNYGEGPPVQRTCAA-ADRT--GHAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVV  192 (611)
Q Consensus       128 ------------~~gg~~~~~~~g~~~~R~~~~-~d~t--G~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav  192 (611)
T Consensus       163 ~~e~l~~~e~~~~~P~l~~---~~~~~~Ga~~~p~d~~~d~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v~~V~  238 (416)
T PRK00711        163 PYELLDRDELAAVEPALAG---VRHKLAGGLRLPNDETGDCQLFTQRLAALAEQLGVKFRFNTPVDGLLVEG-GRITGVQ  238 (416)
T ss_pred             CEEEECHHHHHHHCCCCCC---CCCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC-CEEEEEE
T ss_conf             7399689999874651015---55547899996898706679999999999985388620023158999849-9899885


Q ss_pred             EEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf             89805870899506724741576565
Q gi|254781043|r  193 AWQLETGEIHRFSAKLVVLATGGYGR  218 (611)
Q Consensus       193 ~~~~~~G~~~~i~AkaVILATGG~~~  218 (611)
T Consensus       239 t---~~g---~i~ad~vV~AaGaws~  258 (416)
T PRK00711        239 T---GGG---VITADAYVVALGSYST  258 (416)
T ss_pred             C---CCC---EEEEEEEEEECCHHHH
T ss_conf             3---895---5750169993374369