HHsearch alignment for GI: 254781043 and conserved domain: PRK04176

>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional.
Probab=99.57  E-value=1e-13  Score=108.35  Aligned_cols=140  Identities=30%  Similarity=0.383  Sum_probs=102.7

Q ss_pred             EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r   17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ   96 (611)
Q Consensus        17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~   96 (611)
T Consensus        25 e~DVvIVGaGpsGLtAAy~LAk~g~Kv~i~E~~ls~GGG~Wg--GGm-------------------------lf~~iVv~   77 (257)
T PRK04176         25 EVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGIWG--GGM-------------------------LFNKIVVQ   77 (257)
T ss_pred             HCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--HHH-------------------------HCCHHHHC
T ss_conf             068899888827999999998689659999713468886313--000-------------------------13345400


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCE
Q ss_conf             99998899999999869981327998551001464114567876564079866654266789999998731230311315
Q gi|254781043|r   97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEYF  176 (611)
Q Consensus        97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~~~  176 (611)
T Consensus        78 ----~--~a~~iLde~gi~y~~~~~g~~v-----------------------~d--~~~~~s~L~~~a~~aGakifn~~~  126 (257)
T PRK04176         78 ----E--EADEILDEFGIRYKEVEDGLYV-----------------------AD--SVEAAAKLAAGAIDAGAKIFNGVS  126 (257)
T ss_pred             ----C--HHHHHHHHCCCCCEECCCCEEE-----------------------EC--HHHHHHHHHHHHHHCCCEEEECCE
T ss_conf             ----5--3799999849973335896399-----------------------50--899999999999747988982304


Q ss_pred             EEEEEECCCCCCEEEEEEEEC-------CCEEEEECCCCEEEECCC
Q ss_conf             652000134430124689805-------870899506724741576
Q gi|254781043|r  177 ALDLIINSEGCCVGVVAWQLE-------TGEIHRFSAKLVVLATGG  215 (611)
Q Consensus       177 ~~~Li~d~dG~V~Gav~~~~~-------~G~~~~i~AkaVILATGG  215 (611)
T Consensus       127 VEDli~r~~~rV~GvV~-NWt~V~~~glhvDP~~i~ak~VvdaTGH  171 (257)
T PRK04176        127 VEDVIIREDGRVAGVVI-NWTPVEMAGLHVDPLTIEAKAVVDATGH  171 (257)
T ss_pred             EEEEEEECCCCEEEEEE-CCHHHHHHCCCCCCCEECCCEEEECCCC
T ss_conf             42156612881789996-2577564035558520113689988898