HHsearch alignment for GI: 254781043 and conserved domain: PRK05714
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=98.99 E-value=3.3e-08 Score=72.27 Aligned_cols=153 Identities=19% Similarity=0.246 Sum_probs=82.9
Q ss_pred EEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 31058898996899999999998898299998689885210411653425137899999999999899845887799999
Q gi|254781043|r 16 HSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAI 95 (611)
Q Consensus 16 ~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv 95 (611)
T Consensus 1 m~~DV~IvGaGpvGl~lAl~L~~~G~~v~lie~~~~~~~~~-~~~~~~---------~~-R~--------~-al------ 54 (405)
T PRK05714 1 MRADLLIVGAGMVGSALALALEGSGLEVLLVDGGPLSVKPF-DPQAPF---------EP-RV--------S-AL------ 54 (405)
T ss_pred CCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC-CCCCCC---------CC-CE--------E-EE------
T ss_conf 99889999905999999999961899789995899777877-667789---------84-25--------5-67------
Q ss_pred HHHHHHHHHHHHHHHHCCC----------CCC------CCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 9999988999999998699----------813------279985510014641145678765640798666542667899
Q gi|254781043|r 96 QYLAMEAPQSVYELEHYGV----------PFS------RNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHT 159 (611)
Q Consensus 96 ~~~~~~a~~~i~~Le~~Gv----------~f~------r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~ 159 (611)
T Consensus 55 ------~~~s~~~L~~lG~~~~l~~~~~~p~~~~~v~d~~~~~~~~---f~~~~------~~~~~lg~vv~--~~~l~~~ 117 (405)
T PRK05714 55 ------SAASQRILERLGAWDGIAARRASPYSDMQVWDGSGTGQIH---FSAAS------VHAEVLGHIVE--NRVVQDA 117 (405)
T ss_pred ------CHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCCEEE---ECCCC------CCCCCCCCHHH--HHHHHHH
T ss_conf ------7998999998798165687357761245520589862276---44101------47644411232--6999999
Q ss_pred HHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 99998731230311315652000134430124689805870899506724741576565
Q gi|254781043|r 160 LYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 160 L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 118 L~~~l~~~~v~~~~~~~v~~~~~~~~~-~---~-v~l~~g~--~i~a~llVgADG~~S~ 169 (405)
T PRK05714 118 LLERLHDSDIGLLANARLEQMRRSGDD-W---L-LTLADGR--QLRAPLVVAADGANSA 169 (405)
T ss_pred HHHHHHHCCCEEECCCEEEEEEECCCE-E---E-EEECCCC--EEECCEEEECCCCCCH
T ss_conf 999997279889848789999983880-7---9-9967997--9863889995899856