HHsearch alignment for GI: 254781043 and conserved domain: PRK06481
>PRK06481 fumarate reductase flavoprotein subunit; Validated.
Probab=100.00 E-value=0 Score=539.41 Aligned_cols=399 Identities=28% Similarity=0.433 Sum_probs=314.6
Q ss_pred EEEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECC-----CCCCCCHHHHHHHHHHHCCC
Q ss_conf 3231058898996899999999998898299998689885210411653425137-----89999999999989984588
Q gi|254781043|r 14 VDHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLA-----NMTPDSWQWHLYDTIKGSDW 88 (611)
Q Consensus 14 ~d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~-----~~~~Ds~~~~~~Dt~~~g~~ 88 (611)
T Consensus 57 ~~~~yDVvVVG~G~AGl~AAi~Aae~Ga~VvllEK~~~~GG~s~~s~g~~~~~~t~~q~~~G~~ds~~~~~~d~~~~~~~ 136 (506)
T PRK06481 57 LKDKYDIVIVGAGGAGMTAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGIADSNDKFYEETLKGGGG 136 (506)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 26984679989889999999999988997899968999995188855884526999999738999999999999973488
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCC--CCHHHHHHHHHHHHH
Q ss_conf 779999999999889999999986998132799855100146411456787656407986665--426678999999873
Q gi|254781043|r 89 LGDVDAIQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADR--TGHAILHTLYGQALK 166 (611)
Q Consensus 89 l~d~~lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~--tG~~i~~~L~~~~~~ 166 (611)
T Consensus 137 ~~d~~l~~~~~~~s~~~idWl~~~G~~~~~~~-------~~g--------~~~~~~~~~~~~g~~~g~~lv~~l~~~~~~ 201 (506)
T PRK06481 137 TNDKALLRYFVDNSASAIDWLDSMGIKLDNLT-------ITG--------GMSEKRTHRPHDGSAVGGYLVDGLLKNVQE 201 (506)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CCC--------CCCCCEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 88899999999838999999997598466676-------678--------877670343488764799999999999987
Q ss_pred CCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC------CCC------CCCCCCEECCHHH
Q ss_conf 1230311315652000134430124689805870899506724741576565------433------4210640144488
Q gi|254781043|r 167 NNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR------AYF------SATSAHTCTGDGA 234 (611)
Q Consensus 167 ~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~------ly~------~~t~~~~~tGdG~ 234 (611)
T Consensus 202 ~gv~i~~~t~~~~L~-~~dG~V~GV~~~-~~~g~~~~i~akaVILATGGf~~N~em~~~~~p~~~~~~~~~~~g~tGDGi 279 (506)
T PRK06481 202 RKIPLFVNADVTKIT-EKDGKVTGVKVK-INGKETKTISSKAVVVTTGGFGANKKMIAKYRPDLKGYVTTNQEGSTGDGI 279 (506)
T ss_pred CCCEEEECCEEEEEE-ECCCCEEEEEEE-ECCCEEEEEECCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 798799877832323-058937899999-689849999735699977887767999997395434763069998753899
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCC-----CCCCC---CEE------
Q ss_conf 7887513653333222328884422014304566557808983268612554076510-----04752---011------
Q gi|254781043|r 235 GMVARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAK-----DLASR---DVV------ 300 (611)
Q Consensus 235 ~mA~~aGa~l~~mEf~qfhPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~-----el~~r---d~~------ 300 (611)
T Consensus 280 ~ma~~aGa~~~~m~~~~~~p~~~~~~~~~~~~~~~~~~~i~Vn~~G~RF~nE~~~~~~~~~~~~~~~~~~~~~ifd~~~~ 359 (506)
T PRK06481 280 KMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGNELDTRDKVSAAINKLPEKSAYVIFDEGVK 359 (506)
T ss_pred HHHHHCCCEEECCCCEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCHHCCCCHHHHHHHHHHCCCCCCEEEECHHHH
T ss_conf 99998699484576404325544787530037554886068899988800000628689999985435661587062577
Q ss_pred --HHHHHHHHHHCCCCCCCCCEE--EEEECCCCHHHHHHHHHHHHHHHHHHCCCCC----------CCCE---EEEECCC
Q ss_conf --156889988178888888746--8861117989999985379999976436786----------5440---6752033
Q gi|254781043|r 301 --SRCMMMEIREGRGVGKSKDHI--HLYLNHLDPAVLQERLPGISESARIFAGVDV----------TRDP---IPVIPTV 363 (611)
Q Consensus 301 --s~ai~~ei~~g~g~~~~~~~v--~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~----------~~~~---i~v~p~~ 363 (611)
T Consensus 360 ~~~~~~~~~~~~g~~~--~adTleeLA~~~gi~~~~L~~tv~~yN~~~~~g~D~dfgr~~~~~~~i~~gPfYav~~~p~~ 437 (506)
T PRK06481 360 DRVKAIAQYEEKGFVE--EGKTIDELAKKINVPAETLTKTIDTWNKAVKNKKDEAFGRTTGMDNDLSTGPYYAIKIAPGI 437 (506)
T ss_pred HHHHHHHHHHHCCCCC--CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEEHHH
T ss_conf 7778899998628754--47979999987198989999888888888740772543533246687767980789987344
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 1001234215771585377888533227603402122033566430476432222223215677556654202
Q gi|254781043|r 364 HYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKS 436 (611)
Q Consensus 364 hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~ 436 (611)
T Consensus 438 ~~T~GGl~id~~~qVld~dg----~~IpGLYAaGe~a-gg~~g~~~~gG~~l~~a~vfGr~AG~~AA~~~k~~ 505 (506)
T PRK06481 438 HYTMGGVKINTNTEVLKKDG----SPITGLYAAGEVT-GGLHGENRIGGNSVADIIIFGRQAGTQSAEFVKAQ 505 (506)
T ss_pred CEECCCEEECCCCCEECCCC----CEECCEEECCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 47876917993737668996----9939977754556-17877861589999999999999999999999734