HHsearch alignment for GI: 254781043 and conserved domain: PRK07803
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=100.00 E-value=0 Score=1067.44 Aligned_cols=552 Identities=37% Similarity=0.595 Sum_probs=503.3
Q ss_pred CEEEEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCC-CCCCHHHHHHHHHHHCCCCC
Q ss_conf 13323105889899689999999999889829999868988521041165342513789-99999999998998458877
Q gi|254781043|r 12 TYVDHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANM-TPDSWQWHLYDTIKGSDWLG 90 (611)
Q Consensus 12 ~~~d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~-~~Ds~~~~~~Dt~~~g~~l~ 90 (611)
T Consensus 3 ~~~~~e~DVlVIGsG~AGL~AAi~A~~~G~~V~lv~K~~~~~~~s~~A~GGi~a~~~~~~~~Ds~e~h~~Dtl~~G~~l~ 82 (631)
T PRK07803 3 EVERHEYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNVNPKDNWQVHFGDTMRGGKFLN 82 (631)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 65531059899996499999999998769987999789999865367657676440689999899999999998627888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----
Q ss_conf 9999999999889999999986998132799855100146411456787656407986665426678999999873----
Q gi|254781043|r 91 DVDAIQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALK---- 166 (611)
Q Consensus 91 d~~lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~---- 166 (611)
T Consensus 83 d~~~v~~l~~~a~~~v~~Le~~Gv~f~r~~dG~~~~~~~GGhs--------~~R~~~~~d~tG~~i~~~L~~~~~~~~~~ 154 (631)
T PRK07803 83 NWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHT--------YPRLAHVGDRTGLELIRTLQQKIVSLQQE 154 (631)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999985997544899877210168865--------65001127875699999999999973013
Q ss_pred ---------CCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHH
Q ss_conf ---------12303113156520001344301246898058708995067247415765654334210640144488788
Q gi|254781043|r 167 ---------NNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMV 237 (611)
Q Consensus 167 ---------~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA 237 (611)
T Consensus 155 ~~~~~~~~~~~i~v~~~~~v~~Ll~d-~g~v~Ga~~~~~~~g~~~~~~AkaVVLATGG~g~~f~~ttn~~~~TGDG~amA 233 (631)
T PRK07803 155 DKAELGDYEARIKVFAECTITELLKD-GGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALA 233 (631)
T ss_pred HHHHHHCCCCCEEEEECCEEEEEEEE-CCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 44443203467389933288999986-99999999998789829999625699867767635645689998775999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCC----CEEECCCCCCCCCEEEEECCCCCCCCCCCCC-----------------------
Q ss_conf 7513653333222328884422----0143045665578089832686125540765-----------------------
Q gi|254781043|r 238 ARAGLPLQDMEFVQFHPTGIYG----AGCLITEGARGEGGYLVNSKGERFMERYAPS----------------------- 290 (611)
Q Consensus 238 ~~aGa~l~~mEf~qfhPt~~~~----~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~----------------------- 290 (611)
T Consensus 234 ~raGA~l~dmEfiQfhPTg~~~pp~~~g~Li~E~~RG~GgiL~n~~GeRFm~~y~p~~~~~~~~~~~~~~~~~~~~~~~~ 313 (631)
T PRK07803 234 LRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPPVFKGQYAETEEEADQWLKDNDSA 313 (631)
T ss_pred HHCCCCCCCCEEEEEEEEEECCCCCCCCEECCHHHCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98599806977452465000258775623402644576778889998840443085666655422023443320133122
Q ss_pred --CCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf --10047520111568899881788888887468861-117989999985379999976436786544067520331001
Q gi|254781043|r 291 --AKDLASRDVVSRCMMMEIREGRGVGKSKDHIHLYL-NHLDPAVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNM 367 (611)
Q Consensus 291 --~~el~~rd~~s~ai~~ei~~g~g~~~~~~~v~ld~-~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~ 367 (611)
T Consensus 314 ~~~~~l~prd~varai~~ei~~Grg~~~~--~v~lD~~~~~~~e~i~~~~p~~~~~~~~~~giD~~~~pi~V~P~~Hy~m 391 (631)
T PRK07803 314 RRTPDLLPRDEVARAINSEVKAGRGTPHG--GVYLDIASRLPPEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVM 391 (631)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCC--CEEEEHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEECCCCCEEEE
T ss_conf 23201375899999999999966899888--6676143107989998758469999998639986456332366552653
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 23421577158537788853322760340212203356643047643222222321567755665420265667640023
Q gi|254781043|r 368 GGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPSLDISSC 447 (611)
Q Consensus 368 GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~ 447 (611)
T Consensus 392 GGi~vd~~---------~~~t~IpGLyAaGEva-gGvHGaNRLggNSLle~lVfGr~AG~~Aa~~~~~~~~~~~~~~~~~ 461 (631)
T PRK07803 392 GGIEVDPD---------TGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSDEAV 461 (631)
T ss_pred CCEEECCC---------CCCEECCCCEECCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 68067278---------8834279843346435-6767665430357888899899999999999861677889997999
Q ss_pred HHHHHHHHCCCCC---CCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 5788863101037---8871368999878876650972687589999999999999999841515787754588999999
Q gi|254781043|r 448 DRIMDRFDRLRHA---DGHVPTAALREKMQRAMQLDAGVFRTQDSLSDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETL 524 (611)
Q Consensus 448 ~~~~~~~~~~~~~---~g~~~~~~i~~~Lq~iM~~~~gi~R~~~~L~~al~~L~~l~~~~~~i~~~d~~~~~n~el~~~~ 524 (611)
T Consensus 462 ~~~~~~~~~p~~~~~~~~~~~p~~~~~~lq~~m~~~~gi~R~~~~L~~al~~l~~l~~~~~~~~~~~-~~~~n~~~~~al 540 (631)
T PRK07803 462 DAAARLALAPFEGPADGGAENPYTLQMDLQQVMNDLVGIIRKEDEISQALEKLAELKERYKNVKVEG-HRQFNPGWHLAI 540 (631)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHCHHHHHHH
T ss_conf 9999998604430146787788999999999998478889878999999999999999976077686-311256789999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHCEEEEEEEE----CCCCEEEEEEECCC
Q ss_conf 88889999999999996262550462353377887666880321356999984----68980599994474
Q gi|254781043|r 525 ELQNLMINAIATVYSAEARKESRGSHAREDFKDGEFGGRDDVNWRKHSLCWVD----WNTGKIKLDYRPVH 591 (611)
Q Consensus 525 el~~~l~~Ae~~~~aal~R~ESRG~H~R~DyPe~~~~~rDD~nwl~h~~~~~~----~~~g~~~~~~~Pv~ 591 (611)
T Consensus 541 el~nml~~a~~~~~aAL~R~ESRG~H~R~D~P~-----~D~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (631)
T PRK07803 541 DLRNMLLVSECVARAALERTESRGGHTRDDHPG-----MDP-EWRRILLVCRAAGSDPVGPEVTVTRQPQP 605 (631)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-----CCH-HHHCEEEEEEECCCCCCCCEEEEEECCCC
T ss_conf 999999999999999871743654267878788-----794-24325799984378887870588757789