HHsearch alignment for GI: 254781043 and conserved domain: PRK08849
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=98.80 E-value=3.5e-07 Score=65.52 Aligned_cols=151 Identities=26% Similarity=0.345 Sum_probs=77.5
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEE-ECCCCCCCCHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 1058898996899999999998898299998689885210411653425-137899999999999899845887799999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAA-SLANMTPDSWQWHLYDTIKGSDWLGDVDAI 95 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a-~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv 95 (611)
T Consensus 3 ~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~~p~~~~~~-~~~~~R~~al---~------------------------ 54 (384)
T PRK08849 3 KYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGFEPKAFEAS-QPMDIRVSAI---S------------------------ 54 (384)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCCEEEEEE---C------------------------
T ss_conf 18999999249999999999957995999968998766666-7877056786---7------------------------
Q ss_pred HHHHHHHHHHHHHHHHCCC----------CCCCCC---CCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 9999988999999998699----------813279---985510014641145678765640798666542667899999
Q gi|254781043|r 96 QYLAMEAPQSVYELEHYGV----------PFSRNE---AGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYG 162 (611)
Q Consensus 96 ~~~~~~a~~~i~~Le~~Gv----------~f~r~~---~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~ 162 (611)
T Consensus 55 -------~~s~~~L~~lG~~~~i~~~~~~~~~~~~~~~~~~~-~~~f~~------~~~~~~~lg~iv~--~~~l~~~L~~ 118 (384)
T PRK08849 55 -------QNSVDLLESLGAWSSIVAMRVCPYKRLETWEHPEC-RTRFHS------DELNLDQLGYIVE--NRLIQLGLWQ 118 (384)
T ss_pred -------HHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCC-CCCCCH------HHCCCCCCCCHHH--HHHHHHHHHH
T ss_conf -------99999999879864687614786002553017764-412485------3438630000343--7999999999
Q ss_pred HHHH-CCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 9873-1230311315652000134430124689805870899506724741576565
Q gi|254781043|r 163 QALK-NNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 163 ~~~~-~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 119 ~~~~~~~i~~~~~~~v~~~~~~~~~-~----~v~l~~g~--~i~a~llIgADG~~S~ 168 (384)
T PRK08849 119 QFAQYPNLTLLCPEKLKDLEFSAEG-N----RVTLESGA--EIEAKWVIGADGANSQ 168 (384)
T ss_pred HHHHCCCEEEECCCEEEEEEECCCE-E----EEEECCCC--EEEEEEEEEEECCCHH
T ss_conf 9984899199838778898853881-4----99978999--9985479992078646