HHsearch alignment for GI: 254781043 and conserved domain: PRK12409
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional.
Probab=99.51 E-value=1.9e-12 Score=99.94 Aligned_cols=197 Identities=20% Similarity=0.260 Sum_probs=99.7
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCC-EEEECCC---------------CCCCC--------
Q ss_conf 58898996899999999998898299998689885210411653-4251378---------------99999--------
Q gi|254781043|r 19 DVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGG-IAASLAN---------------MTPDS-------- 74 (611)
Q Consensus 19 DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GG-i~a~~~~---------------~~~Ds-------- 74 (611)
T Consensus 3 ~V~VIGaGivGlstA~~La~~G~~VtviDr~~~~~~~aS~gNaG~ls~~~~~p~~~p~~~~~~~~~l~~~~~pl~~~~~~ 82 (410)
T PRK12409 3 HIAVIGAGITGVTTAYALAQRGYQVTVFDRHRYAAMETSFANGGQLSASNAEVWNHWATVLKGLKWMLRKDAPLLLNPRP 82 (410)
T ss_pred CEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCC
T ss_conf 59998983999999999997899189996989987634830121136220456568304778888851889980417876
Q ss_pred -H---HHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCEEEEC----------------CCCC
Q ss_conf -9---99999899845-88779999999999889999-9999869981327998551001----------------4641
Q gi|254781043|r 75 -W---QWHLYDTIKGS-DWLGDVDAIQYLAMEAPQSV-YELEHYGVPFSRNEAGKIYQRP----------------FGGH 132 (611)
Q Consensus 75 -~---~~~~~Dt~~~g-~~l~d~~lv~~~~~~a~~~i-~~Le~~Gv~f~r~~~G~~~~~~----------------~gg~ 132 (611)
T Consensus 83 ~~~~~~w~~~-fl~~~~~~~~~~~~~~~la~~~~~~~~~l~~~~g~d~~~~~~G~L~~~~~~~~~~~~~~~~~~~~~~Gv 161 (410)
T PRK12409 83 SWHKYSWLAE-FLAHIPNYRANTIETVRLAIAAREHLFDIAEREGIDFDLERRGILHIYHDKADFDHAKRVNALLNEGGL 161 (410)
T ss_pred CHHHHHHHHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHHHHHHHHHHHHHHCCC
T ss_conf 8677699999-997677889889999999999999999999975987420448789998488899999999999997699
Q ss_pred CC---------CCCC--CCCCCEEEEE-CCCCC--HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECC
Q ss_conf 14---------5678--7656407986-66542--667899999987312303113156520001344301246898058
Q gi|254781043|r 133 MQ---------NYGE--GPPVQRTCAA-ADRTG--HAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLET 198 (611)
Q Consensus 133 ~~---------~~~~--g~~~~R~~~~-~d~tG--~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~ 198 (611)
T Consensus 162 ~~~~L~~~el~~leP~L~~~~~ggi~~p~d~~~dp~~~~~al~~~~~~~G~~~~~~~~V~~i~~~~-~~v~v~~~~~~~- 239 (410)
T PRK12409 162 ERRAVTPEEMRAIEPTLTGEYYGGFYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTDIKTDG-DRVVLTCQDSSQ- 239 (410)
T ss_pred CCEEECHHHHHHHCCCCCCEEEEEEEECCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEC-CEEEEEECCCCC-
T ss_conf 819838999997566765305789981786063589999999999997799998785589999809-989999646423-
Q ss_pred CEEEEECCCCEEEECCCCCC
Q ss_conf 70899506724741576565
Q gi|254781043|r 199 GEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 199 G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 240 ~~~~~~~ad~vViAaGawS~ 259 (410)
T PRK12409 240 GDSRTLEFDGVVVCAGVGSR 259 (410)
T ss_pred CCCCEEEEEEEEECCCCCCH
T ss_conf 35525883049987666637