HHsearch alignment for GI: 254781043 and conserved domain: PRK12839
>PRK12839 hypothetical protein; Provisional.
Probab=100.00 E-value=0 Score=439.23 Aligned_cols=416 Identities=22% Similarity=0.243 Sum_probs=278.2
Q ss_pred CCCEEEEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECC-----CCCCCCHHHHHHHHHH
Q ss_conf 44133231058898996899999999998898299998689885210411653425137-----8999999999998998
Q gi|254781043|r 10 SYTYVDHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLA-----NMTPDSWQWHLYDTIK 84 (611)
Q Consensus 10 ~~~~~d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~-----~~~~Ds~~~~~~Dt~~ 84 (611)
T Consensus 2 ~p~~~~~e~DVvVVGsG~AGl~AAi~Aa~~Ga~VivlEK~~~~GG~s~~sgG~~~~~g~~~q~~~Gi~ds~e~~~~~l~~ 81 (574)
T PRK12839 2 TPEHMKHQYDVIVVGSGAGGLSAAVSAAYGGKKVAVVEKASVCGGATTWSGGWAWTPGNSLARADGVNEDKEEFRTYLQH 81 (574)
T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCEECCCCHHHHHCCCCCCHHHHHHHHHH
T ss_conf 81311771578998968999999999998899289996899998435562764322899999971999999999999998
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC---C----------CCEEE--ECCCCCCCC------------C
Q ss_conf 4588779999999999889999999986-99813279---9----------85510--014641145------------6
Q gi|254781043|r 85 GSDWLGDVDAIQYLAMEAPQSVYELEHY-GVPFSRNE---A----------GKIYQ--RPFGGHMQN------------Y 136 (611)
Q Consensus 85 ~g~~l~d~~lv~~~~~~a~~~i~~Le~~-Gv~f~r~~---~----------G~~~~--~~~gg~~~~------------~ 136 (611)
T Consensus 82 ~~~~~~~~~~~~~~~~~~~e~i~~l~~~~~~~~~~~~~~~d~~~~~~g~~~g~r~~~p~~~~~~~~~~~~~~~~~~~~~~ 161 (574)
T PRK12839 82 VLGEYYQADKVDAFLDAAPEMVDFFEKKTDLQFVPGAKINDIYGNLPGAGTGHRSVGPKPFNGRRVPPSVLAKLRHQLYE 161 (574)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCC
T ss_conf 73644799999999970399999999668855623777641103576776587655776674301475665541233211
Q ss_pred ----C----CCC----------CCCEE-EEE------------------CCCCCHHHHHHHHHHHHHCCCEEECCCEEEE
Q ss_conf ----7----876----------56407-986------------------6654266789999998731230311315652
Q gi|254781043|r 137 ----G----EGP----------PVQRT-CAA------------------ADRTGHAILHTLYGQALKNNAEFFIEYFALD 179 (611)
Q Consensus 137 ----~----~g~----------~~~R~-~~~------------------~d~tG~~i~~~L~~~~~~~gv~i~~~~~~~~ 179 (611)
T Consensus 162 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~al~~~l~~~~~~~Gv~i~~~t~~~~ 241 (574)
T PRK12839 162 TSFLGMGIMAGPDLTKFLSASQFDPKGWVHAARRVIVHLLDLVVHRRNMQLVNGTALTGRLLTSADDLGVDLRVSTSAVS 241 (574)
T ss_pred CCCCCCCEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEE
T ss_conf 23356520025368888753356862133444554312234330245554567299999999999982986996661479
Q ss_pred EEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCC------CC---------CCCCCCEECCHHHHHHHHHCCCC
Q ss_conf 0001344301246898058708995067247415765654------33---------42106401444887887513653
Q gi|254781043|r 180 LIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRA------YF---------SATSAHTCTGDGAGMVARAGLPL 244 (611)
Q Consensus 180 Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~l------y~---------~~t~~~~~tGdG~~mA~~aGa~l 244 (611)
T Consensus 242 Li~d~~G~V~GV~~~~-~~g~~~i~a~kgVVLATGGF~~N~em~~~~~p~~p~~~~~~~~~~~~~tGDGi~ma~~~GA~l 320 (574)
T PRK12839 242 LNTDNAGRVTGVKVQT-PDGLVDFEATRGVVLATGGFPNDVDRRKELFPRTPTGREHWTLAPAETTGDGISLAREVGARF 320 (574)
T ss_pred EEECCCCCEEEEEEEE-CCCEEEEEECCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 8761798488899981-795199983235899038843399999975745877555544478877648999999838871
Q ss_pred CCC--CCCCCCCCCCCCC-----EE---ECCCCCCCCCEEEEECCCCCCCCCCCCCC------CCCCCC--CEEHHHHH-
Q ss_conf 333--2223288844220-----14---30456655780898326861255407651------004752--01115688-
Q gi|254781043|r 245 QDM--EFVQFHPTGIYGA-----GC---LITEGARGEGGYLVNSKGERFMERYAPSA------KDLASR--DVVSRCMM- 305 (611)
Q Consensus 245 ~~m--Ef~qfhPt~~~~~-----~~---l~~~~~rg~G~~l~n~~Gerf~~~y~~~~------~el~~r--d~~s~ai~- 305 (611)
T Consensus 321 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~--~~pg~i~Vn~~GkRF~nE~~~~~~~~~a~~~~~~~~~~~~~w~I~D 398 (574)
T PRK12839 321 VNDVKSPAAWCPVSLVPYRNGKVGTFPHIMDR--AKPGSIGVLATGKRFVNEANGYYDYVDAMLKAAPEGEPVASWQIAD 398 (574)
T ss_pred CCCCCCCCEECCEECCCCCCCCCCCCHHHHHH--CCCCEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 33655654132233033568863311115551--4885278878998750477747469999997341479862499976
Q ss_pred ----HHHHHCCCCCCCC-------CEEEEE---E------CCCCHHHHHHHHHHHHHHHHHHCCCCCCC-----------
Q ss_conf ----9988178888888-------746886---1------11798999998537999997643678654-----------
Q gi|254781043|r 306 ----MEIREGRGVGKSK-------DHIHLY---L------NHLDPAVLQERLPGISESARIFAGVDVTR----------- 354 (611)
Q Consensus 306 ----~ei~~g~g~~~~~-------~~v~ld---~------~~~~~~~l~~~~~~~~~~~~~~~g~D~~~----------- 354 (611)
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~kadTleELA~~~gid~~~L~~TV~~yN~~~~~G~D~dFgr~~~~~~~~~gd 478 (574)
T PRK12839 399 SRFVRKFPLGMAKPLPVPLTPYLRSGYLVKGRTIEELAQKCGIDPAGLRATVTEFNENARDGVDPEFGRGSTAFNKYGGD 478 (574)
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
T ss_conf 89997554333567775303464268067549999999886959899999999998887549884558776323213677
Q ss_pred --------------CE---EEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCC-CCCCCCC
Q ss_conf --------------40---67520331001234215771585377888533227603402122033566430-4764322
Q gi|254781043|r 355 --------------DP---IPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANR-LGSNSLI 416 (611)
Q Consensus 355 --------------~~---i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGanr-lggnsl~ 416 (611)
T Consensus 479 ~~~~p~~~l~pI~~~PfYA~~~~p~~~~T~GGl~id~~~~VLd~~g~----pIpGLYAAG~~~-ggv~g~~y~~gG~slg 553 (574)
T PRK12839 479 PKNGPNPSLAPIEKGPFYAVKVVPGSFGTFAGLKADGKSRVLRDDDT----PIDGLYTAGNDQ-ASVMGGHYPAGGINLG 553 (574)
T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCC----EECCEEECCCCC-CCCCCCCCCCCHHHHH
T ss_conf 56688744374667986999987031523888679988742899989----808865675355-5778888787377698
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 22223215677556654
Q gi|254781043|r 417 DLVVFGRAAVIRASEMI 433 (611)
Q Consensus 417 ~~~vfG~~Ag~~aa~~~ 433 (611)
T Consensus 554 ~~~~fGriAG~~aA~~~ 570 (574)
T PRK12839 554 PALTFGYIAGRELANST 570 (574)
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999998620