HHsearch alignment for GI: 254781043 and conserved domain: PRK13339
>PRK13339 malate:quinone oxidoreductase; Reviewed.
Probab=98.46 E-value=3.4e-06 Score=59.11 Aligned_cols=192 Identities=20% Similarity=0.184 Sum_probs=99.7
Q ss_pred EEECEEEECCCHHHHHHHHHHHH--CCCCEEEEECCCCC---CCCCH-HCCCCEEEE--CCCCC--CC-CH--HH-----
Q ss_conf 31058898996899999999998--89829999868988---52104-116534251--37899--99-99--99-----
Q gi|254781043|r 16 HSYDVVVVGAGGAGLRATLGMAE--KGFKTACITKVFPT---RSHTV-AAQGGIAAS--LANMT--PD-SW--QW----- 77 (611)
Q Consensus 16 ~~~DVlVIG~G~AGl~AAi~A~e--~G~~V~lieK~~~~---~g~s~-~A~GGi~a~--~~~~~--~D-s~--~~----- 77 (611)
T Consensus 5 ~~~DVvLIGaGIMsaTL~~lL~el~P~~~I~l~Erl~~~A~ESS~~wNNAGTGHaa~CElNYTp~~~dg~i~i~KA~~In 84 (497)
T PRK13339 5 ESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNERNNAGTGHAALCELNYTVQQADGSIDIKKAKEIN 84 (497)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHH
T ss_conf 77788998952889999999997699874899981475454407886655221001022048876569824179999999
Q ss_pred --------HHHHHHHHCCCCCCHHH-HH-----------HHHHHHHHHHHHHHH----CCCCCCCCCCCCEEE-EC--CC
Q ss_conf --------99989984588779999-99-----------999988999999998----699813279985510-01--46
Q gi|254781043|r 78 --------HLYDTIKGSDWLGDVDA-IQ-----------YLAMEAPQSVYELEH----YGVPFSRNEAGKIYQ-RP--FG 130 (611)
Q Consensus 78 --------~~~Dt~~~g~~l~d~~l-v~-----------~~~~~a~~~i~~Le~----~Gv~f~r~~~G~~~~-~~--~g 130 (611)
T Consensus 85 eqFe~S~QfWs~lv~~g-~l~~p~~FI~~~PHmSfV~Ge~nv~fLrkRyeal~~~~lF~~MefseD~~-~i~~w~PLvm~ 162 (497)
T PRK13339 85 EQFEISKQFWGHLVKKG-TIGNPREFINPLPHISFVRGKNNVKFLKKRFEALKQHPMFDNIEYTEDIE-VMAKWMPLMMP 162 (497)
T ss_pred HHHHHHHHHHHHHHHCC-CCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCHH-HHHHHCCEEEC
T ss_conf 99999999999998657-87985787377982467567588899999999873487877768605989-99753775226
Q ss_pred CCCCCCCCCCCCCEEEEECCCCC-----HHHHHHHHHHHHHC-CCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEE
Q ss_conf 41145678765640798666542-----66789999998731-2303113156520001344301246898058708995
Q gi|254781043|r 131 GHMQNYGEGPPVQRTCAAADRTG-----HAILHTLYGQALKN-NAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRF 204 (611)
Q Consensus 131 g~~~~~~~g~~~~R~~~~~d~tG-----~~i~~~L~~~~~~~-gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i 204 (611)
T Consensus 163 gR~~------~-e~vAAtr~~~GTDVdFGaLTr~l~~~l~~~~~~~v~~~~eV~~i~r~~dg~w-~v~v~~~~~~~~~~~ 234 (497)
T PRK13339 163 GREA------D-EIMAASKIDEGTDVNFGALTRKMAKSLEAHPNAQVQYNHEVVDLERLSDGGW-EVTVKDRNTGGKREQ 234 (497)
T ss_pred CCCC------C-CCEEEEECCCCEEECHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCE-EEEEEECCCCCEEEE
T ss_conf 9897------8-8555882578534018999999999997489839994788632177899988-999996578975999
Q ss_pred CCCCEEEECCCCC
Q ss_conf 0672474157656
Q gi|254781043|r 205 SAKLVVLATGGYG 217 (611)
Q Consensus 205 ~AkaVILATGG~~ 217 (611)
T Consensus 235 ~A~fVFvGAGG~s 247 (497)
T PRK13339 235 VADYVFIGAGGGA 247 (497)
T ss_pred EECEEEECCCHHH
T ss_conf 9367998887377