HHsearch alignment for GI: 254781043 and conserved domain: TIGR00551
>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=100.00 E-value=0 Score=999.96 Aligned_cols=510 Identities=38% Similarity=0.572 Sum_probs=454.8
Q ss_pred EEECEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCHHCCCCEEEECCCCCCC-CHHHHHHHHHHHCCCCCCHH
Q ss_conf 3105889899689999999999889829999868-988521041165342513789999-99999998998458877999
Q gi|254781043|r 16 HSYDVVVVGAGGAGLRATLGMAEKGFKTACITKV-FPTRSHTVAAQGGIAASLANMTPD-SWQWHLYDTIKGSDWLGDVD 93 (611)
Q Consensus 16 ~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~-~~~~g~s~~A~GGi~a~~~~~~~D-s~~~~~~Dt~~~g~~l~d~~ 93 (611)
T Consensus 1 ~~~dV~viGsGaAGL~aAlal~~~~~~V~v~~K~a~~~~~~s~yAQGGIAa~~~~~--DdSi~~Hv~DTL~AGaG~cD~~ 78 (546)
T TIGR00551 1 SEADVVVIGSGAAGLSAALALAEKYRDVVVISKAAEVKESASYYAQGGIAAALAET--DDSIDAHVEDTLAAGAGLCDEE 78 (546)
T ss_pred CCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCEEEECCCC--CCCHHHHHHHHHHHCCCCCCHH
T ss_conf 96359997520899999985332686378975875555675200011266303875--5856877899998446788688
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCC----CEEEECCCCCCCCCCCCCCCCEEEEEC-CCCCHHHHHHHHHHHH-HC
Q ss_conf 99999998899999999869981327998----551001464114567876564079866-6542667899999987-31
Q gi|254781043|r 94 AIQYLAMEAPQSVYELEHYGVPFSRNEAG----KIYQRPFGGHMQNYGEGPPVQRTCAAA-DRTGHAILHTLYGQAL-KN 167 (611)
Q Consensus 94 lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G----~~~~~~~gg~~~~~~~g~~~~R~~~~~-d~tG~~i~~~L~~~~~-~~ 167 (611)
T Consensus 79 aV~~v~~~~~~av~~L~~~Gv~FD~~~~gnGee~~~LtrEGgHS--------~~RI~HA~GDaTGr~~~~~L~~~a~~~p 150 (546)
T TIGR00551 79 AVEFVVSDAKEAVQELVEAGVSFDRNEQGNGEERLALTREGGHS--------YRRILHAAGDATGREVISTLLKKARSEP 150 (546)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCC--------CCCEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999853689999998669220267798874431001335667--------7742773576324899999999974377
Q ss_pred CCEEECCCEEEEEEEC------CCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHC
Q ss_conf 2303113156520001------3443012468980587089950672474157656543342106401444887887513
Q gi|254781043|r 168 NAEFFIEYFALDLIIN------SEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAG 241 (611)
Q Consensus 168 gv~i~~~~~~~~Li~d------~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aG 241 (611)
T Consensus 151 ~~~~~~~~~A~~l~i~dkiGlP~~g~~~G~~v~~~nK~~~e~~~a~aVvLAtGG~g~ly~~TTNp~~stGDGIala~raG 230 (546)
T TIGR00551 151 NVEIIEGEVALDLLIEDKIGLPTTGRVVGVLVVDSNKETVETLHADAVVLATGGLGKLYSFTTNPKVSTGDGIALAWRAG 230 (546)
T ss_pred CEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHCC
T ss_conf 62410121444444225024798887999999716787237763010003207732100312388742314689998728
Q ss_pred CCCCCCCCCCCCCCCCCC-----CEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCC
Q ss_conf 653333222328884422-----014304566557808983268612554076510047520111568899881788888
Q gi|254781043|r 242 LPLQDMEFVQFHPTGIYG-----AGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREGRGVGK 316 (611)
Q Consensus 242 a~l~~mEf~qfhPt~~~~-----~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g~g~~~ 316 (611)
T Consensus 231 ~~v~DLEF~QFHPT~L~~~~~GG~~~LitEAvRGEGA~Lvd~~G~Rf~~~~hp~-GeLAPRDiVaRAI~~~m~~~~~-dP 308 (546)
T TIGR00551 231 VEVRDLEFVQFHPTALVKPRVGGRYFLITEAVRGEGAILVDRDGKRFMADVHPR-GELAPRDIVARAIDEEMKKGGK-DP 308 (546)
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEECCCCCCC-CCCCCHHHHHHHHHHHHHHCCC-CC
T ss_conf 722046342567211137887898764001100387423558886702677888-8767404889999999972287-93
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEC
Q ss_conf 88746886111798999998537999997643678654406752033100123421577158537788853322760340
Q gi|254781043|r 317 SKDHIHLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAI 396 (611)
Q Consensus 317 ~~~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAa 396 (611)
T Consensus 309 tqacVfLD~s~Ie~~~f~~RFP~I~~~c~~-~GID~~~~~IPv~P~AHY~~GGi~vD~~g~----------T~~~GLYAi 377 (546)
T TIGR00551 309 TQACVFLDASGIEDDFFKSRFPTITAKCRG-AGIDIVREPIPVVPAAHYTMGGISVDAYGR----------TTVPGLYAI 377 (546)
T ss_pred CEEEEEEECCCCCHHHHHCCCCHHHHHHHH-CCCCCCCCCCCCCCCCCEEECCEEECCCCE----------ECCCCEEEE
T ss_conf 406888743588834652127278999985-788755587154466715736788757633----------213430120
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCHHHHHHHHHHHCCCCCC-CCCCHHHHHHHH
Q ss_conf 2122033566430476432222223215677556654202--6566764002357888631010378-871368999878
Q gi|254781043|r 397 GEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKS--SPIPSLDISSCDRIMDRFDRLRHAD-GHVPTAALREKM 473 (611)
Q Consensus 397 Ge~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~~~L 473 (611)
T Consensus 378 GE~A~tGlHGANRLASNSLLEclV~G~~aa~~i~~~~~~~Grs~~-~~~--~---~~~e~-~~~~~~~d~~~Lq~~~~~~ 450 (546)
T TIGR00551 378 GEVACTGLHGANRLASNSLLECLVFGLRAARAISRKPPAAGRSDE-SSS--A---LWDEP-RSETPDIDRAELQHKMSEL 450 (546)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HCC--C---CCCCC-EEECCCCCHHHHHHHHHHH
T ss_conf 024306651146777787889987328999998653553366510-026--6---65541-3423775145664576688
Q ss_pred HHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCC-------CC------CCCCCCCCHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 8766509726875899999999999999998415-------15------7877545889999-99888899999999999
Q gi|254781043|r 474 QRAMQLDAGVFRTQDSLSDGCRNLSCLWDEMADL-------KV------HDRSLIWNSDLVE-TLELQNLMINAIATVYS 539 (611)
Q Consensus 474 q~iM~~~~gi~R~~~~L~~al~~L~~l~~~~~~i-------~~------~d~~~~~n~el~~-~~el~~~l~~Ae~~~~a 539 (611)
T Consensus 451 ~~~~w~~aGi~R~~~~L~~a~~~~~~~~~~~~~~ssskl~AHlPedq~~S~~GPGln-efmql~~El~~L~~vA~l~~~s 529 (546)
T TIGR00551 451 RSLLWEAAGIVRLSESLEEALRKLVEVQEEVDELSSSKLLAHLPEDQKVSLSGPGLN-EFMQLLLELRNLLQVAKLVTIS 529 (546)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999997401445578987877899999999987544444212763341326788778-9999999999899999999999
Q ss_pred HHCCCCCCCCEECCCCC
Q ss_conf 96262550462353377
Q gi|254781043|r 540 AEARKESRGSHAREDFK 556 (611)
Q Consensus 540 al~R~ESRG~H~R~DyP 556 (611)
T Consensus 530 AL~R~ESRG~H~R~DyP 546 (546)
T TIGR00551 530 ALLREESRGAHYRLDYP 546 (546)
T ss_pred HHCCCCCCCCCCCCCCC
T ss_conf 75043346765457889