HHsearch alignment for GI: 254781043 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=98.73 E-value=4.9e-07 Score=64.59 Aligned_cols=69 Identities=29% Similarity=0.458 Sum_probs=50.2
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ 96 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~ 96 (611)
T Consensus 142 ~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPG--------G---V~~YGIPe--------------fRLpKei~~ 196 (462)
T TIGR01316 142 KKKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPG--------G---VLAYGIPE--------------FRLPKEIVE 196 (462)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCC--------C---EEEECCCC--------------CCCCHHHHH
T ss_conf 8779998468214688999974798699997148998--------5---67536888--------------548757889
Q ss_pred HHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999988999999998699813
Q gi|254781043|r 97 YLAMEAPQSVYELEHYGVPFS 117 (611)
Q Consensus 97 ~~~~~a~~~i~~Le~~Gv~f~ 117 (611)
T Consensus 197 -------~E~k~LkklGv~fr 210 (462)
T TIGR01316 197 -------TEVKKLKKLGVKFR 210 (462)
T ss_pred -------HHHHHHHHCCEEEE
T ss_conf -------88887632663799