HHsearch alignment for GI: 254781043 and conserved domain: TIGR01320
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase; InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase . ; GO: 0008924 malate dehydrogenase (acceptor) activity, 0006099 tricarboxylic acid cycle.
Probab=97.43 E-value=0.0011 Score=42.72 Aligned_cols=191 Identities=21% Similarity=0.213 Sum_probs=99.0
Q ss_pred ECEEEECCCHHHHHHHHHHH--HCCCCEEEEECCCCC--CCCCHH--CCCCEEEE--CCCCCC------C---------C
Q ss_conf 05889899689999999999--889829999868988--521041--16534251--378999------9---------9
Q gi|254781043|r 18 YDVVVVGAGGAGLRATLGMA--EKGFKTACITKVFPT--RSHTVA--AQGGIAAS--LANMTP------D---------S 74 (611)
Q Consensus 18 ~DVlVIG~G~AGl~AAi~A~--e~G~~V~lieK~~~~--~g~s~~--A~GGi~a~--~~~~~~------D---------s 74 (611)
T Consensus 1 ~DvvLvGAGIMSATLGvLLk~LeP~w~~~l~Erld~~A~ESS~pWNNAGTGHSALCELNYtP~~~dG~idi~kAv~ine~ 80 (487)
T TIGR01320 1 TDVVLVGAGIMSATLGVLLKELEPSWEITLIERLDAVALESSNPWNNAGTGHSALCELNYTPEVADGSIDIAKAVGINEQ 80 (487)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
T ss_conf 96788656166899999997309995389998607745466766001120136876422478876782653556220114
Q ss_pred ---HHHHHHHHHHHCCCCCCHHH----H--HHHHHHHHHHHHHHHH-----------CCCCCCCCCCCCEEEECCCCCCC
Q ss_conf ---99999989984588779999----9--9999988999999998-----------69981327998551001464114
Q gi|254781043|r 75 ---WQWHLYDTIKGSDWLGDVDA----I--QYLAMEAPQSVYELEH-----------YGVPFSRNEAGKIYQRPFGGHMQ 134 (611)
Q Consensus 75 ---~~~~~~Dt~~~g~~l~d~~l----v--~~~~~~a~~~i~~Le~-----------~Gv~f~r~~~G~~~~~~~gg~~~ 134 (611)
T Consensus 81 F~VsrQFWa~lv~~G-~L~dp~~FiNpVPH~Sfv~G~-~~v~YLk~Ry~AL~~~~lF~~m~y~~d~~-~~a~~-----lP 152 (487)
T TIGR01320 81 FQVSRQFWAHLVEEG-VLEDPKSFINPVPHVSFVRGS-DGVAYLKKRYEALKKHPLFEGMEYSEDKA-TFAEW-----LP 152 (487)
T ss_pred CEECHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHCCCCCCCCCEECCHH-HHHHH-----CC
T ss_conf 113188898998367-246854022788852026570-66799999999861784313750005868-99874-----25
Q ss_pred CCCCCCCC--CEEE-EECCCCCH---HHHHHHHHHHHHC-CCEEECCCEEEEEEECCCCCCEEEEEEEECC-CEEEEECC
Q ss_conf 56787656--4079-86665426---6789999998731-2303113156520001344301246898058-70899506
Q gi|254781043|r 135 NYGEGPPV--QRTC-AAADRTGH---AILHTLYGQALKN-NAEFFIEYFALDLIINSEGCCVGVVAWQLET-GEIHRFSA 206 (611)
Q Consensus 135 ~~~~g~~~--~R~~-~~~d~tG~---~i~~~L~~~~~~~-gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~-G~~~~i~A 206 (611)
T Consensus 153 LM~~gR~~~~pvA~~~~~~GTDvdFGalt~Ql~~~~~~~PG~~~~yg~~V~~l~r~sD~~W~-vt~~d~r~PG~~~~l~a 231 (487)
T TIGR01320 153 LMAKGRDFSEPVAANWVAEGTDVDFGALTKQLLKYLEQEPGTKIRYGHEVKDLKRESDGAWV-VTVKDTRTPGGKRTLKA 231 (487)
T ss_pred CCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCEEECCCCEEHHHHCCCCCCE-EEECCCCCCCCCEEEEE
T ss_conf 45687688634332120478400277899999999702898167638500011010588537-88412208887626766
Q ss_pred CCEEEECCCCC
Q ss_conf 72474157656
Q gi|254781043|r 207 KLVVLATGGYG 217 (611)
Q Consensus 207 kaVILATGG~~ 217 (611)
T Consensus 232 ~FvFlGAGG~A 242 (487)
T TIGR01320 232 RFVFLGAGGGA 242 (487)
T ss_pred EEEEEECCCCH
T ss_conf 77897157416