>TIGR01377 soxA_mon sarcosine oxidase, monomeric form; InterPro: IPR006281 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the monomeric form.; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.

Probab=98.48 E-value=1.8e-05 Score=54.32 Aligned_cols=174 Identities=22% Similarity=0.237 Sum_probs=89.6 Q ss_pred ECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC--CCCCHHCCCC---EEEECCCCCCC-CHHHHHHHHH-------H Q ss_conf 05889899689999999999889829999868988--5210411653---42513789999-9999999899-------8 Q gi|254781043|r 18 YDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPT--RSHTVAAQGG---IAASLANMTPD-SWQWHLYDTI-------K 84 (611) Q Consensus 18 ~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~--~g~s~~A~GG---i~a~~~~~~~D-s~~~~~~Dt~-------~ 84 (611) T Consensus 1 fDvIVvGAG~~G~~aaY~LAK~~~~~LLleqFd~pH~rGSs---HG~sRiIR~a---Y~Edr~Y~~m~~e~~~lWa~le~ 74 (401) T TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKRGKKTLLLEQFDLPHSRGSS---HGQSRIIRKA---YPEDRFYTSMVSECYQLWAQLEK 74 (401) T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---CCCCCCEECC---CCCCHHHHHHHHHHHHHHHHHHH T ss_conf 95799817613568999987538617887515677678887---8771000102---67863578899999999999862 Q ss_pred -HCC-----------CCC-C-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEE-EEC Q ss_conf -458-----------877-9-9999999998899999999869981327998551001464114567876564079-866 Q gi|254781043|r 85 -GSD-----------WLG-D-VDAIQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTC-AAA 149 (611) Q Consensus 85 -~g~-----------~l~-d-~~lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~-~~~ 149 (611) T Consensus 75 E~g~k~h~qT~~l~~G~k~~s~~l~~~~a~--------~~~~~l~H~~~~s~~l~~-rf~G-------~i~~p~n~~g~~ 138 (401) T TIGR01377 75 EAGTKLHRQTGLLLLGPKENSQSLKTIVAT--------LSRHGLEHELLSSKQLKQ-RFPG-------NIRVPRNEVGLL 138 (401) T ss_pred CCCCEEECCCCEEEECCCCCCHHHHHHHHH--------HHHCCCCEEEECCHHHHH-CCCC-------CEECCCCEEEEE T ss_conf 147264313451563157786058999998--------862552303316412320-0476-------234068607887 Q ss_pred CCCC-----HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCC Q ss_conf 6542-----6678999999873123031131565200013443012468980587089950672474157656 Q gi|254781043|r 150 DRTG-----HAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYG 217 (611) Q Consensus 150 d~tG-----~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~ 217 (611) T Consensus 139 ~~~gGvl~~~ka~~a~q~l~~~~Ga~v~d~~kV~~i~~~Ge-sGe~~vt~kt~~---~sy~a~~lvvtaGaW~ 207 (401) T TIGR01377 139 DELGGVLYAEKALRALQELAEAHGAIVRDGTKVVEIKPDGE-SGELLVTVKTTK---DSYQAKKLVVTAGAWT 207 (401) T ss_pred ECCCCEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCC-CCCCEEEEEEEC---CEEECCEEEEECCCCH T ss_conf 46887462278999999999874968734860366542676-789548999727---7032135789538861

HHsearch alignment for GI: 254781043 and conserved domain: TIGR01377