HHsearch alignment for GI: 254781043 and conserved domain: TIGR02023
>TIGR02023 BchP-ChlP geranylgeranyl reductase; InterPro: IPR010253 This entry represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll . It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).; GO: 0045550 geranylgeranyl reductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process.
Probab=98.02 E-value=5e-06 Score=58.02 Aligned_cols=348 Identities=18% Similarity=0.241 Sum_probs=150.2
Q ss_pred ECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 05889899689999999999889829999868988521041165342513789999999999989984588779999999
Q gi|254781043|r 18 YDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQY 97 (611)
Q Consensus 18 ~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~ 97 (611)
T Consensus 1 ydV~viGGGPsGA~AAe~LA~~G~~tiLlER~l~---~~KPCGGAIPp~li-~EFdiP~~li~~r~~------------~ 64 (408)
T TIGR02023 1 YDVAVIGGGPSGAAAAETLARAGIETILLERALS---RIKPCGGAIPPCLI-EEFDIPDDLIDRRVR------------K 64 (408)
T ss_pred CCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHHC---CCCCCCCCCCHHHC-CCCCCCHHHHHHHHC------------E
T ss_conf 9678981685068999999864974886302432---65888886651101-235788889973200------------6
Q ss_pred HHHHHHH--HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 9998899--99999986998132799855100146411456787656407986665426678999999873123031131
Q gi|254781043|r 98 LAMEAPQ--SVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEY 175 (611)
Q Consensus 98 ~~~~a~~--~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~~ 175 (611)
T Consensus 65 ~~miSP~Gq~~~v~~~~~~P~---~~~yV------GM---------VrREv---------FD~~LReRA~kaGAe~~~g~ 117 (408)
T TIGR02023 65 ARMISPSGQEIAVEIKVDIPV---EDGYV------GM---------VRREV---------FDEYLRERAQKAGAELIEGL 117 (408)
T ss_pred EEEECCCCCCEECCCEEECCC---CCCEE------EE---------EEHHH---------CCHHHHHHHHHHHHHHHHHH
T ss_conf 467777886100242024365---88667------77---------55144---------15789999876214766567
Q ss_pred EEEEEEECCCC---CCEEEEEEEE-----CCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCC
Q ss_conf 56520001344---3012468980-----587089950672474157656543342106401444887887513653333
Q gi|254781043|r 176 FALDLIINSEG---CCVGVVAWQL-----ETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAGLPLQDM 247 (611)
Q Consensus 176 ~~~~Li~d~dG---~V~Gav~~~~-----~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aGa~l~~m 247 (611)
T Consensus 118 f-~~~~~d~~GWds~~~-~~~~~~~G~k~ag~~~~~v~~~~VIGADGA~S~vAR~~~~~~~~--~~~viA~qEri~~p~~ 193 (408)
T TIGR02023 118 F-KKLERDEDGWDSRVT-LQYREKDGKKEAGEEKKSVEADVVIGADGANSKVARKELGLPDN--LPKVIAYQERIKLPDE 193 (408)
T ss_pred H-HHHCCCCCCCCCCEE-EEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCC--HHHEEEHHHEECCCCC
T ss_conf 5-520156777755258-99876777512567777378988760447886588971875886--0230201120048886
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHH--HHHHHHCCCCCCCCCEEEEEE
Q ss_conf 222328884422014304566557808983268612554076510047520111568--899881788888887468861
Q gi|254781043|r 248 EFVQFHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCM--MMEIREGRGVGKSKDHIHLYL 325 (611)
Q Consensus 248 Ef~qfhPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai--~~ei~~g~g~~~~~~~v~ld~ 325 (611)
T Consensus 194 ~~~~y~e~-------------------~~d--------~~~--~g~VSP-DFYgW~FPk~dH~avG~Gt~P--------- 234 (408)
T TIGR02023 194 SKMKYYEE-------------------LAD--------VYY--DGEVSP-DFYGWVFPKGDHIAVGTGTEP--------- 234 (408)
T ss_pred CCCCCCCC-------------------EEE--------EEE--CCEECC-CCCCCCCCCCCEEEEECCCCC---------
T ss_conf 56577887-------------------799--------998--880486-423020688777888327885---------
Q ss_pred CCCCHHHHHHHHHHHHHHHH--HHCCCCCCCC--EEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCC
Q ss_conf 11798999998537999997--6436786544--0675203310012342157715853778885332276034021220
Q gi|254781043|r 326 NHLDPAVLQERLPGISESAR--IFAGVDVTRD--PIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGC 401 (611)
Q Consensus 326 ~~~~~~~l~~~~~~~~~~~~--~~~g~D~~~~--~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~ 401 (611)
T Consensus 235 --~h~~d~K~~~~~lr~~~GD~L~~~~tir~EaapIPm~Pr~~~~~~r----------------------~~~L~GDAAG 290 (408)
T TIGR02023 235 --THGFDIKQLQAALRRRAGDKLDGGKTIRREAAPIPMKPRPRWDSGR----------------------DVVLVGDAAG 290 (408)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCC----------------------CEEEECCCCC
T ss_conf --6427899999999987302656183010026767755441000588----------------------6699813466
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 33566430476432222223215677556654202656676400235788863101037887136899987887665097
Q gi|254781043|r 402 ASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPSLDISSCDRIMDRFDRLRHADGHVPTAALREKMQRAMQLDA 481 (611)
Q Consensus 402 ~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Lq~iM~~~~ 481 (611)
T Consensus 291 ~V~~----~SGEGIY~Am~sG~~aA~a~~E~l~~Gkk~~--~a~~L~~y~~~f~K~y-----~~~f~~L~~LQ~~----- 354 (408)
T TIGR02023 291 LVTP----ASGEGIYFAMKSGKMAAEAIVEALQSGKKAI--DATDLRKYEKKFMKLY-----GTTFRVLRVLQKV----- 354 (408)
T ss_pred CEEC----CCCCHHHHHHHCCHHHHHHHHHHHHCCCCCC--CCCCHHHHHHHHHHHC-----CHHHHHHHHHHHH-----
T ss_conf 3344----3761688876310789999999984453252--4464478999987631-----5043466777432-----
Q ss_pred EEEECHHHHHH
Q ss_conf 26875899999
Q gi|254781043|r 482 GVFRTQDSLSD 492 (611)
Q Consensus 482 gi~R~~~~L~~ 492 (611)
T Consensus 355 -~Yrsd~~RE~ 364 (408)
T TIGR02023 355 -YYRSDRRREK 364 (408)
T ss_pred -HCCCCCCHHH
T ss_conf -1388720247