HHsearch alignment for GI: 254781043 and conserved domain: TIGR02374
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit; InterPro: IPR012744 This entry describes NirB, the large subunit of nitrite reductase [NAD(P)H] (the assimilatory nitrite reductase), which associates with NirD, the small subunit (IPR012748 from INTERPRO). In a few bacteria such as Klebsiella pneumoniae and in fungi, the two regions are fused.; GO: 0008942 nitrite reductase [NAD(P)H] activity, 0050660 FAD binding, 0050661 NADP binding, 0042128 nitrate assimilation.
Probab=96.53 E-value=0.0075 Score=37.23 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=18.9
Q ss_pred EEEECCCHHHHHHHHHHH----HCCCCEEEEECCC
Q ss_conf 889899689999999999----8898299998689
Q gi|254781043|r 20 VVVVGAGGAGLRATLGMA----EKGFKTACITKVF 50 (611)
Q Consensus 20 VlVIG~G~AGl~AAi~A~----e~G~~V~lieK~~ 50 (611)
T Consensus 1 LvlvGnGM~G~R~iE~vl~~~~~~~f~Itvfg~EP 35 (813)
T TIGR02374 1 LVLVGNGMVGHRLIEEVLKKDDKDEFEITVFGEEP 35 (813)
T ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 97870474103477767512101773089982588