HHsearch alignment for GI: 254781043 and conserved domain: pfam01494

>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=99.21  E-value=4.3e-10  Score=84.58  Aligned_cols=161  Identities=19%  Similarity=0.173  Sum_probs=88.1

Q ss_pred             EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r   17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ   96 (611)
Q Consensus        17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~   96 (611)
T Consensus         1 ~~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~~~~g----~g~~--l---~p~~~~-----~L~~-lGl-------   58 (349)
T pfam01494         1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLP----RAGG--L---NQRTME-----LLRQ-AGL-------   58 (349)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCC----EEEE--E---CHHHHH-----HHHH-CCC-------
T ss_conf             9978999928899999999987799899992899988787----7999--8---989999-----9998-798-------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE-C-CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf             9999889999999986998132799855100-1-4641145678765640798666542667899999987312303113
Q gi|254781043|r   97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQR-P-FGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIE  174 (611)
Q Consensus        97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~-~-~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~  174 (611)
T Consensus        59 ---------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~-~~~--r~~l~~~L~~~~~~~~~~i~~~  121 (349)
T pfam01494        59 ---------EDRILAEGAPHEGM---GLAFYNTSRRRADLDFLTSP--PRVT-VYP--QTELEPILREHAEARGAQVRFG  121 (349)
T ss_pred             ---------HHHHHHCCCCCCEE---EEEECCCCCCEEECCCCCCC--CCEE-EEC--HHHHHHHHHHHHHHCCCEEEEC
T ss_conf             ---------68998506875105---99983786422201455677--6268-862--9999999999998579989966


Q ss_pred             CEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf             15652000134430124689805870899506724741576565
Q gi|254781043|r  175 YFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR  218 (611)
Q Consensus       175 ~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~  218 (611)
T Consensus       122 ~~v~~~~~~~~-~v~~-~~~~~~~~~~~~i~adlvIgADG~~S~  163 (349)
T pfam01494       122 TEVLSLEQDGD-GVTA-VVRDRRDGEEYTVRAKYLVGCDGGRSP  163 (349)
T ss_pred             CEEEEEEECCC-CEEE-EEEECCCCCEEEEEEEEEECCCCCCCH
T ss_conf             17877520599-4379-998458995589997688415777648