HHsearch alignment for GI: 254781043 and conserved domain: pfam01494
>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=99.21 E-value=4.3e-10 Score=84.58 Aligned_cols=161 Identities=19% Similarity=0.173 Sum_probs=88.1
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ 96 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~ 96 (611)
T Consensus 1 ~~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~~~~g----~g~~--l---~p~~~~-----~L~~-lGl------- 58 (349)
T pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLP----RAGG--L---NQRTME-----LLRQ-AGL------- 58 (349)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCC----EEEE--E---CHHHHH-----HHHH-CCC-------
T ss_conf 9978999928899999999987799899992899988787----7999--8---989999-----9998-798-------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE-C-CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf 9999889999999986998132799855100-1-4641145678765640798666542667899999987312303113
Q gi|254781043|r 97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQR-P-FGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIE 174 (611)
Q Consensus 97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~-~-~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~ 174 (611)
T Consensus 59 ---------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~-~~~--r~~l~~~L~~~~~~~~~~i~~~ 121 (349)
T pfam01494 59 ---------EDRILAEGAPHEGM---GLAFYNTSRRRADLDFLTSP--PRVT-VYP--QTELEPILREHAEARGAQVRFG 121 (349)
T ss_pred ---------HHHHHHCCCCCCEE---EEEECCCCCCEEECCCCCCC--CCEE-EEC--HHHHHHHHHHHHHHCCCEEEEC
T ss_conf ---------68998506875105---99983786422201455677--6268-862--9999999999998579989966
Q ss_pred CEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 15652000134430124689805870899506724741576565
Q gi|254781043|r 175 YFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 175 ~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 122 ~~v~~~~~~~~-~v~~-~~~~~~~~~~~~i~adlvIgADG~~S~ 163 (349)
T pfam01494 122 TEVLSLEQDGD-GVTA-VVRDRRDGEEYTVRAKYLVGCDGGRSP 163 (349)
T ss_pred CEEEEEEECCC-CEEE-EEEECCCCCEEEEEEEEEECCCCCCCH
T ss_conf 17877520599-4379-998458995589997688415777648