HHsearch alignment for GI: 254781043 and conserved domain: pfam07992
>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=98.84 E-value=5.7e-08 Score=70.71 Aligned_cols=108 Identities=28% Similarity=0.285 Sum_probs=67.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 58898996899999999998898299998689885210411653425137899999999999899845887799999999
Q gi|254781043|r 19 DVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQYL 98 (611)
Q Consensus 19 DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~~ 98 (611)
T Consensus 1 DVvIIGgG~AGl~aA~~l~~~g~~v~lid~~~----~~~~~~~~i~~~~~-----------------~~~---------- 49 (277)
T pfam07992 1 DVVIIGGGPAGLAAAIYLARLGLKVALIEKEG----GTCYNRGCIPKKLL-----------------LEA---------- 49 (277)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCC----CCEEEECCCCCCCC-----------------CCC----------
T ss_conf 99999976999999999984999799993799----93575577477116-----------------454----------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCEEE
Q ss_conf 99889999999986998132799855100146411456787656407986665426678999999873123031131565
Q gi|254781043|r 99 AMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEYFAL 178 (611)
Q Consensus 99 ~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~~~~~ 178 (611)
T Consensus 50 ----------------------------------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 77 (277)
T pfam07992 50 ----------------------------------------------------AEVGKLDLRPLEQYKDEGIEVLLGTGVT 77 (277)
T ss_pred ----------------------------------------------------CCHHHHHHHHHHHHHHCCCEEEECCEEE
T ss_conf ----------------------------------------------------3314561899999987597999687799
Q ss_pred EEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 2000134430124689805870899506724741576565
Q gi|254781043|r 179 DLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 179 ~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 78 ~i~~~--~~~--v---~~~~g~--~~~~d~lviAtG~~~~ 108 (277)
T pfam07992 78 AIDKA--GKK--V---TLDDGK--ELTYDKLVIATGARPR 108 (277)
T ss_pred EEECC--CCE--E---EECCCC--EEECCEEEECCCCCCC
T ss_conf 99789--998--9---987893--9985999998799862