HHsearch alignment for GI: 254781044 and conserved domain: COG2080

>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].

Probab=97.64  E-value=6.1e-05  Score=50.97  Aligned_cols=67  Identities=24%  Similarity=0.441  Sum_probs=51.4

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCE-EEEECCCCCCCCCCEEEECCCCCCCCCCCHHCCCC--CEEEEECCC
Q ss_conf             89986426788116789999997328763-88404567735443031436126632110000478--518986489
Q gi|254781044|r   46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTL-TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPH  118 (259)
Q Consensus        46 ~~y~v~~~~~~~tvld~L~~ik~~~D~sl-~fr~sCr~giCGsCa~~iNG~~~LAC~t~~~~~~~--~i~iePl~~  118 (259)
T Consensus        11 ~~~~~~~~-p~~~Ll~~LRd~l~-----ltgtk~GC~~g~CGACtVlvDG~~v~SCl~~a~~~~G~~ItTiEGl~~   80 (156)
T COG2080          11 EPVELDVD-PRTPLLDVLRDELG-----LTGTKKGCGHGQCGACTVLVDGEAVNSCLTLAVQAEGAEITTIEGLAK   80 (156)
T ss_pred             EEEEEEEC-CCCHHHHHHHHHCC-----CCCCCCCCCCCCCCCEEEEECCEEEHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             58899758-99829999998528-----877677888723795099999958417889999957985997422267