HHsearch alignment for GI: 254781044 and conserved domain: PRK05888
>PRK05888 NADH dehydrogenase subunit I; Provisional.
Probab=97.59 E-value=5.3e-06 Score=57.56 Aligned_cols=57 Identities=23% Similarity=0.452 Sum_probs=33.2
Q ss_pred HHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 888887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 (259)
Q Consensus 167 ~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI 241 (259)
T Consensus 57 ~ekCi~C~lC~~~CP~~~I~i~~~~-------------~~-~g~---k~~~~~~-Id~~rCifCGlCve~CP~~A 113 (172)
T PRK05888 57 EERCIACKLCEAICPANAITIEAAE-------------RE-DGR---RRTTRYD-INFGRCIFCGFCEEACPTDA 113 (172)
T ss_pred CEECCCCCCHHHHCCCCCCEEEEEC-------------CC-CCC---EEEEEEE-ECCCCCCCCCCCCCCCCCCC
T ss_conf 7403577655655887767898750-------------89-985---7745777-53460578888221088872