HHsearch alignment for GI: 254781044 and conserved domain: PRK07570
>PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.
Probab=100.00 E-value=0 Score=443.67 Aligned_cols=224 Identities=25% Similarity=0.437 Sum_probs=178.7
Q ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC----CCCEEEEECCCCCCCCCCEEEECCCC------
Q ss_conf 79999986368888887368998642678811678999999732----87638840456773544303143612------
Q gi|254781044|r 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSCGMNIDGTN------ 96 (259)
Q Consensus 27 ~~~~~i~R~~p~~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~----D~sl~fr~sCr~giCGsCa~~iNG~~------ 96 (259)
T Consensus 2 ~v~~~I~R~~~-~~~~p~~q~y~v~~~~~~mtVL~aL~~i~~~~~~~~~~pLsfR~sCr~giCGSCam~ING~p~~~~~~ 80 (247)
T PRK07570 2 KLTLKIWRQKG-PKAKGKFETYEVKDISPDMSFLEMLDVLNEQLILKGEEPVAFDHDCREGICGMCGLVINGRPHGPDRG 80 (247)
T ss_pred EEEEEEEECCC-CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 17999984799-98897328888068899884999999999987652699647742567776776841688852777656
Q ss_pred CCCCCCCHHCCC--CCEEEEEC--CCCEEEEEEEEEHHHHHHHHHHHHHCCCCCC-C-CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 663211000047--85189864--8980441124510479998875421034666-3-1101112207776544668888
Q gi|254781044|r 97 TLACVKDMKDIK--GAIAVYPL--PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-P-KPAKELLQSHEDRQKIDGLYEC 170 (259)
Q Consensus 97 ~LAC~t~~~~~~--~~i~iePl--~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~-~-~~~~e~~qsped~~~~~~~~~C 170 (259)
T Consensus 81 ~LAC~t~v~~~~~g~~I~iePLr~~~fPVIkDLVVD~~~f-~k~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~C 159 (247)
T PRK07570 81 TTTCQLHMRSFKDGDTITIEPWRAKAFPVIKDLVVDRSAL-DRIIQAGGYVSVNTGGAPDANAIPVPKEDADLAMDAAAC 159 (247)
T ss_pred CCCEECHHHHCCCCCCEEECCCCCCCCCEEEEEEECCHHH-HHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHCHHHH
T ss_conf 5410251232788981377246567998301124203899-998864385405888899722356898899974352330
Q ss_pred HHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCC-HHHHHH---HHCCCCCCCCCCCCCCHHHHCCCCCCHHHH
Q ss_conf 8731313228200102221011478899988516888431-388999---622866527676647345518997888999
Q gi|254781044|r 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLD---NLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 (259)
Q Consensus 171 I~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~-~~erl~---~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~ 246 (259)
T Consensus 160 I~Cg~C~saCPn~~--~~~f~ga~----~~~~~~~~~~~~~r~~r~~~~~~~~~~~G~~~C~~~~~C~~vCPK~I-p~~~ 232 (247)
T PRK07570 160 IGCGACVAACPNGS--AMLFTGAK----VSHLALLPQGQPERARRVRAMVDAMDEEGFGNCSNTGECEAVCPKGI-SLDN 232 (247)
T ss_pred HCCCHHHHCCCCCC--CCCCCHHH----HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHH
T ss_conf 11334441089862--22332576----64302375650557789999999874588658988687014087999-9999
Q ss_pred HHHHHHHHHHCCC
Q ss_conf 9999999986129
Q gi|254781044|r 247 IAKIKMMLLDRKI 259 (259)
Q Consensus 247 I~~LRr~~v~rkl 259 (259)
T Consensus 233 I~~lkre~~~~~~ 245 (247)
T PRK07570 233 IARMNREYLRAKF 245 (247)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999872