HHsearch alignment for GI: 254781044 and conserved domain: PRK11274
>PRK11274 glcF glycolate oxidase iron-sulfur subunit; Provisional.
Probab=99.43 E-value=1.8e-13 Score=103.88 Aligned_cols=85 Identities=25% Similarity=0.552 Sum_probs=65.5
Q ss_pred HHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHH
Q ss_conf 66888887313132282001022210114788999885168884313889996228665276766473455189978889
Q gi|254781044|r 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 (259)
Q Consensus 165 ~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~ 244 (259)
T Consensus 20 ~~v~~Cv~CG~C~~~CPsy~~t~~E~~spRGRi~Llr~~l~g~~~~~~~~~-~------ld~Cl~C~~C~~~CP~gV~~~ 92 (407)
T PRK11274 20 AILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAEVTEKTQL-H------LDRCLTCRNCETTCPSGVQYG 92 (407)
T ss_pred HHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH-H------HHHCCCCCCCCCCCCCCCCHH
T ss_conf 999977878866366988210278777950999999999829988778999-8------475718587465378999779
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999986
Q gi|254781044|r 245 KAIAKIKMMLLD 256 (259)
Q Consensus 245 ~~I~~LRr~~v~ 256 (259)
T Consensus 93 ~li~~~R~~~~~ 104 (407)
T PRK11274 93 RLLDIGRKVVEE 104 (407)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999998