HHsearch alignment for GI: 254781044 and conserved domain: PRK11433
>PRK11433 putative xanthine dehydrogenase iron-sulfur-binding subunit; Provisional.
Probab=98.18 E-value=6.3e-06 Score=57.11 Aligned_cols=77 Identities=22% Similarity=0.427 Sum_probs=56.3
Q ss_pred CCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 60799999863688888873689986426788116789999997328763884045677354430314361266321100
Q gi|254781044|r 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 (259)
Q Consensus 25 ~~~~~~~i~R~~p~~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~~ 104 (259)
T Consensus 49 ~~~v~l~VN-------G----~~~~~~vdp-~ttLLd~LRe~Lg-L---TGtK~GC~~G~CGACTVlvDG~~v~SCl~la 112 (217)
T PRK11433 49 ISPVTFKVN-------G----KTEQLELDT-RTTLLDALREHLH-L---TGTKKGCDHGQCGACTVLVNGRRLNACLTLA 112 (217)
T ss_pred CCEEEEEEC-------C----EEEEEECCC-CCCHHHHHHHHCC-C---CCCCCCCCCCCCCCCEEEECCCEEECCCCHH
T ss_conf 630799999-------9----997874389-8889999998639-9---7568888997788988999982833640748
Q ss_pred HCCCC--CEEEEECC
Q ss_conf 00478--51898648
Q gi|254781044|r 105 KDIKG--AIAVYPLP 117 (259)
Q Consensus 105 ~~~~~--~i~iePl~ 117 (259)
T Consensus 113 ~~~~G~~ItTIEGL~ 127 (217)
T PRK11433 113 VMHQGAEITTIEGLG 127 (217)
T ss_pred HHCCCCEEEEEECCC
T ss_conf 762897799852347