HHsearch alignment for GI: 254781044 and conserved domain: PRK12385
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional.
Probab=100.00 E-value=0 Score=569.68 Aligned_cols=232 Identities=32% Similarity=0.607 Sum_probs=220.4
Q ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 86079999986368888887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 (259)
Q Consensus 24 ~~~~~~~~i~R~~p~~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~ 103 (259)
T Consensus 2 em~~v~~~V~Ry~P~~d~~p~~~~y~v~~~-~~~tvLd~L~~Ik~~~D~sL~fr~sCr~giCGsCam~iNG~~~LAC~t~ 80 (243)
T PRK12385 2 EMKNLKIEVLRYNPETDTEPHSATYEVPYD-ETTSLLDALGYIKDNLDPDLSYRWSCRMAICGSCGMMVNNVPKLACKTF 80 (243)
T ss_pred CCEEEEEEEEEECCCCCCCCCEEEEEEECC-CCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCEEECCEEEE
T ss_conf 850899999985889999874489998579-9997999999998534998247557899977626689899640002541
Q ss_pred HHCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCC
Q ss_conf 0004785189864898044112451047999887542103466631-101112207776544668888873131322820
Q gi|254781044|r 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 (259)
Q Consensus 104 ~~~~~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~~-~~~e~~qsped~~~~~~~~~CI~CG~C~saCP~ 182 (259)
T Consensus 81 i~~~~~~i~iePl~~~pVikDLvVD~~~f~~k~~~v~p~l~~~~~~~~~~~~~~~p~~~~k~~~~~~CI~Cg~C~saCp~ 160 (243)
T PRK12385 81 LRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNDRTPDDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQ 160 (243)
T ss_pred HHHCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCC
T ss_conf 23268965997679996776778663999998661177220588898632345897899998601266552387642887
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 010222101147889998851688843138899962286652767664734551899788899999999999861
Q gi|254781044|r 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 (259)
Q Consensus 183 ~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~r 257 (259)
T Consensus 161 ~~~~~~-flGPaal~~a~Rf~~D~RD~~~~eRl~~l~~~~Gv~~C~~~~~C~~vCPK~I~p~~aI~~lk~ea~k~ 234 (243)
T PRK12385 161 FGLNPE-FIGPAAITLAHRYNLDSRDHGKKERMAQLNGQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKD 234 (243)
T ss_pred CCCCCC-CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 566866-55999999999860497642368899973057981179885861372948989899999999999999