HHsearch alignment for GI: 254781044 and conserved domain: PRK12809

Probab=91.24  E-value=0.14  Score=30.06  Aligned_cols=83  Identities=20%  Similarity=0.264  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHCC---CHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC-----CCCCCCCCH
Q ss_conf             54466888887313---1322820010222101147889998851688843138899962286652-----767664734
Q gi|254781044|r  162 QKIDGLYECVMCAC---CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-----YRCHTIMNC  233 (259)
Q Consensus       162 ~~~~~~~~CI~CG~---C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi-----~~C~~C~~C  233 (259)
T Consensus       202 ~A~~eA~RCl~Cg~~~~C~~~CPv~~~I------P~~i~~i~----~g~~---~eA~~~i~~tN~lP~icGRVCP~~~~C  268 (639)
T PRK12809        202 QATYESDRCVYCAEKANCNWHCPLHNAI------PDYIRLVQ----EGKI---IEAAELCHQTSSLPEICGRVCPQDRLC  268 (639)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCH------HHHHHHHH----CCCH---HHHHHHHHHHCCCHHHHCCCCCCCCCH
T ss_conf             9999998975796986625389899977------89999998----6999---999999986488024323668998666


Q ss_pred             HHHCCCCCC-HHHHHHHHHHHHHHC
Q ss_conf             551899788-899999999999861
Q gi|254781044|r  234 TQSCPKGLN-PAKAIAKIKMMLLDR  257 (259)
Q Consensus       234 ~~vCPkgI~-~~~~I~~LRr~~v~r  257 (259)
T Consensus       269 E~aC~~~~~~~pVaIg~LERfi~D~  293 (639)
T PRK12809        269 EGACTLKDHSGAVSIGNLERYITDT  293 (639)
T ss_pred             HHHCCCCCCCCCEEECHHHHHHHHH
T ss_conf             9865289999985788899999999