HHsearch alignment for GI: 254781044 and conserved domain: PRK13552
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional.
Probab=100.00 E-value=0 Score=565.57 Aligned_cols=233 Identities=29% Similarity=0.581 Sum_probs=216.4
Q ss_pred CCEEEEEEEEECCC-CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 60799999863688-88887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 (259)
Q Consensus 25 ~~~~~~~i~R~~p~-~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~ 103 (259)
T Consensus 2 ~k~vt~~I~R~~P~~~~~~p~~~~y~v~~~-~~~tvLdaL~~Ike~~D~sLaFr~sCR~giCGSCam~ING~p~LAC~t~ 80 (240)
T PRK13552 2 GRTLTFNIFRYDPQSPVSKPHMVTYQLEET-PGMTLFIALNLIREEQDPSLQFDFVCRAGICGSCAMVINGRPTLACRTL 80 (240)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEECCCCCCC
T ss_conf 956999999858999988861589995489-9987999999999724997046514567767866678899641000040
Q ss_pred HHCCCC-CEEEEECCCCEEEEEEEEEHHHHHHHH-HHHHHCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 000478-518986489804411245104799988-7542103466631--101112207776544668888873131322
Q gi|254781044|r 104 MKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPWLKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTS 179 (259)
Q Consensus 104 ~~~~~~-~i~iePl~~~pVikDLvVD~~~~~~~~-~~~~p~~~~~~~~--~~~e~~qsped~~~~~~~~~CI~CG~C~sa 179 (259)
T Consensus 81 v~~~~~~~i~iePl~~fpVIkDLVVD~~~f~~~~~~~v~~~l~~~~~~~~~~~e~~~~~e~~~~~~~~~~CI~Cg~C~sa 160 (240)
T PRK13552 81 TSDYPDGVITLMPLPVFKLIGDLSVNTGKWFREMAERVESWLHTKKEFDIHRLEERMEPEEAAEIYELDRCIECGCCVAA 160 (240)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 00068995799889999611356540489999998616515426988886644577899999999989998875300323
Q ss_pred CCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHH-HHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 820010222101147889998851688843138899-9622866527676647345518997888999999999998612
Q gi|254781044|r 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 (259)
Q Consensus 180 CP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl-~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk 258 (259)
T Consensus 161 Cp~~~~~~~-f~GPaal~~a~r~~~D~RD~~~~erl~~~~~~~~G~~~C~~~~~C~~vCPK~I~p~~~I~~Lrr~~~~~~ 239 (240)
T PRK13552 161 CATKQMRPD-FVGAVGMNRIARFELDPRDERSDEDFYELIGNDDGVFGCMTLLGCEDNCPKDLPLQQQIAYLRRKMAATG 239 (240)
T ss_pred CCCHHHCCC-CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 852111536-6688999998886618843357999999852788853899978723719889998999999999999704
Q ss_pred C
Q ss_conf 9
Q gi|254781044|r 259 I 259 (259)
Q Consensus 259 l 259 (259)
T Consensus 240 ~ 240 (240)
T PRK13552 240 V 240 (240)
T ss_pred C
T ss_conf 9