HHsearch alignment for GI: 254781044 and conserved domain: PRK13552

>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional.
Probab=100.00  E-value=0  Score=565.57  Aligned_cols=233  Identities=29%  Similarity=0.581  Sum_probs=216.4

Q ss_pred             CCEEEEEEEEECCC-CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             60799999863688-88887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r   25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD  103 (259)
Q Consensus        25 ~~~~~~~i~R~~p~-~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~  103 (259)
T Consensus         2 ~k~vt~~I~R~~P~~~~~~p~~~~y~v~~~-~~~tvLdaL~~Ike~~D~sLaFr~sCR~giCGSCam~ING~p~LAC~t~   80 (240)
T PRK13552          2 GRTLTFNIFRYDPQSPVSKPHMVTYQLEET-PGMTLFIALNLIREEQDPSLQFDFVCRAGICGSCAMVINGRPTLACRTL   80 (240)
T ss_pred             CCEEEEEEEEECCCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEECCCCCCC
T ss_conf             956999999858999988861589995489-9987999999999724997046514567767866678899641000040


Q ss_pred             HHCCCC-CEEEEECCCCEEEEEEEEEHHHHHHHH-HHHHHCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             000478-518986489804411245104799988-7542103466631--101112207776544668888873131322
Q gi|254781044|r  104 MKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPWLKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTS  179 (259)
Q Consensus       104 ~~~~~~-~i~iePl~~~pVikDLvVD~~~~~~~~-~~~~p~~~~~~~~--~~~e~~qsped~~~~~~~~~CI~CG~C~sa  179 (259)
T Consensus        81 v~~~~~~~i~iePl~~fpVIkDLVVD~~~f~~~~~~~v~~~l~~~~~~~~~~~e~~~~~e~~~~~~~~~~CI~Cg~C~sa  160 (240)
T PRK13552         81 TSDYPDGVITLMPLPVFKLIGDLSVNTGKWFREMAERVESWLHTKKEFDIHRLEERMEPEEAAEIYELDRCIECGCCVAA  160 (240)
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             00068995799889999611356540489999998616515426988886644577899999999989998875300323


Q ss_pred             CCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHH-HHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             820010222101147889998851688843138899-9622866527676647345518997888999999999998612
Q gi|254781044|r  180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK  258 (259)
Q Consensus       180 CP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl-~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk  258 (259)
T Consensus       161 Cp~~~~~~~-f~GPaal~~a~r~~~D~RD~~~~erl~~~~~~~~G~~~C~~~~~C~~vCPK~I~p~~~I~~Lrr~~~~~~  239 (240)
T PRK13552        161 CATKQMRPD-FVGAVGMNRIARFELDPRDERSDEDFYELIGNDDGVFGCMTLLGCEDNCPKDLPLQQQIAYLRRKMAATG  239 (240)
T ss_pred             CCCHHHCCC-CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             852111536-6688999998886618843357999999852788853899978723719889998999999999999704


Q ss_pred             C
Q ss_conf             9
Q gi|254781044|r  259 I  259 (259)
Q Consensus       259 l  259 (259)
T Consensus       240 ~  240 (240)
T PRK13552        240 V  240 (240)
T ss_pred             C
T ss_conf             9