HHsearch alignment for GI: 254781044 and conserved domain: PTZ00305

>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional.
Probab=91.78  E-value=0.044  Score=33.24  Aligned_cols=58  Identities=17%  Similarity=0.272  Sum_probs=34.9

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEEEC-CCCCCCCCCEEEECCCC--CCCCCCCHHCCCCCEEEE
Q ss_conf             678811678999999732876388404-56773544303143612--663211000047851898
Q gi|254781044|r   53 DNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTN--TLACVKDMKDIKGAIAVY  114 (259)
Q Consensus        53 ~~~~~tvld~L~~ik~~~D~sl~fr~s-Cr~giCGsCa~~iNG~~--~LAC~t~~~~~~~~i~ie  114 (259)
T Consensus        81 ~p~eeNLLeV~eraGI~-IPrFCYH~~LsiaGnCRMCLVEVEG~~klvaSCatpV~e---GM~V~  141 (297)
T PTZ00305         81 IPQEENLLEVLEREGIR-VPKFCYHPILSVAGNCRMCLVQVDGTQNLVVSCATVALP---GMSII  141 (297)
T ss_pred             CCCCCCHHHHHHHCCCC-CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC---CCEEE
T ss_conf             57744099999985997-776657999885676337699968998887463764789---98886