HHsearch results for GI: 254781044 and protein with PDBid: 1gte_A

>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*

Probab=95.86  E-value=0.00061  Score=43.42  Aligned_cols=48  Identities=23%  Similarity=0.533  Sum_probs=29.2

Q ss_pred             HHHHHHHHCCCHHHCC--CEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
Q ss_conf             6888887313132282--0010222101147889998851688843138899962286652767664734551899
Q gi|254781044|r  166 GLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK  239 (259)
Q Consensus       166 ~~~~CI~CG~C~saCP--~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPk  239 (259)
                      +...||.||.|+-+|-  .|++=              .|  |+.-     ++. +.++    .|+.|+.|..|||.
T Consensus       949 d~~~Ci~Cg~C~~~C~d~~yqAi--------------~~--~~~~-----~~~-~~~~----~C~GC~lC~~vCPv  998 (1025)
T 1gte_A          949 DEEMCINCGKCYMTCNDSGYQAI--------------QF--DPET-----HLP-TVTD----TCTGCTLCLSVCPI  998 (1025)
T ss_dssp             CTTTCCCCCHHHHHHHHHSCSCE--------------EE--CTTT-----CCE-EECT----TCCCCCHHHHHCSS
T ss_pred             CHHHCCCCCCEEEECCCCCCCEE--------------EE--CCCC-----CCC-CCCC----CCCCCCCHHHHCCC
T ss_conf             87778899873644078981117--------------96--7986-----556-6677----58875874231897