HHsearch results for GI: 254781044 and protein with PDBid: 1kqf_B
>1kqf_B FDH-N beta, formate dehydrogenase, nitrate-inducible, iron- sulfur subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=96.27 E-value=9.2e-06 Score=54.74 Aligned_cols=62 Identities=21% Similarity=0.517 Sum_probs=36.4
Q ss_pred HHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC---------CHH
Q ss_conf 46688888731313228200102221011478899988516888431388999622866527676647---------345
Q gi|254781044|r 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM---------NCT 234 (259)
Q Consensus 164 ~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~---------~C~ 234 (259)
..+...||.|+.|+.+||.-. -.| . .. ..-+..|+.|. +|+
T Consensus 127 ~id~~~CiGC~~C~~aCP~~a---i~~------------~--~~-------------~~~~~KC~~C~~r~~~G~~PACv 176 (294)
T 1kqf_B 127 DFQSENCIGCGYCIAGCPFNI---PRL------------N--KE-------------DNRVYKCTLCVDRVSVGQEPACV 176 (294)
T ss_dssp EECGGGCCCCCHHHHHCTTCC---CEE------------E--TT-------------TTEEECCCTTHHHHTTTCCCHHH
T ss_pred EECCCCCCCHHHHHHCCCCCC---CEE------------E--CC-------------CCCEEECCCCHHHHHCCCCCCHH
T ss_conf 715242576166875699998---464------------1--67-------------79665377267777379986227
Q ss_pred HHCCCCC----CHHHHHHHHHHHHH
Q ss_conf 5189978----88999999999998
Q gi|254781044|r 235 QSCPKGL----NPAKAIAKIKMMLL 255 (259)
Q Consensus 235 ~vCPkgI----~~~~~I~~LRr~~v 255 (259)
++||.+- +..+.+...++++.
T Consensus 177 ~aCPt~Ai~fG~~~e~~~~a~~rv~ 201 (294)
T 1kqf_B 177 KTCPTGAIHFGTKKEMLELAEQRVA 201 (294)
T ss_dssp HHCTTSCEEEEEHHHHHHHHHHHHH
T ss_pred HHCCCCCEEEECHHHHHHHHHHHHH
T ss_conf 7501277799558997889999999