HHsearch results for GI: 254781044 and protein with PDBid: 1n62_A

>1n62_A Carbon monoxide dehydrogenase small chain; CODH, copper, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans OM5} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*

Probab=97.81  E-value=1.1e-05  Score=54.28  Aligned_cols=67  Identities=12%  Similarity=0.275  Sum_probs=49.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHCCCC--CEEEEECCC
Q ss_conf             998642678811678999999732876388404567735443031436126632110000478--518986489
Q gi|254781044|r   47 TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPH  118 (259)
Q Consensus        47 ~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~~~~~~~--~i~iePl~~  118 (259)
                      .++++++ ++.++||.|+.   +.+- -.-+.+|.+|.||+|++.|||+++-+|.+.+..+.+  ..|||=|.+
T Consensus        14 ~~~~~v~-p~~~Ll~~LR~---~l~l-tgtK~GC~~G~CGACTVlvdg~~v~SCl~~a~~~~g~~I~TvEgl~~   82 (166)
T 1n62_A           14 PVEALVE-PRTLLIHFIRE---QQNL-TGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAA   82 (166)
T ss_dssp             EEEEEEC-TTCBHHHHHHH---TSCC-TTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGSSC
T ss_pred             EEEEECC-CCCCHHHHHHH---CCCC-CCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCEEEEEECCCC
T ss_conf             9897479-99999999960---4899-32234607878898487238821143302265609965898403478