HHsearch results for GI: 254781044 and protein with PDBid: 2bs2_B
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=100.00 E-value=0 Score=509.51 Aligned_cols=233 Identities=28% Similarity=0.545 Sum_probs=211.9
Q ss_pred CCEEEEEEEEECCCCC-CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 6079999986368888-887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 (259)
Q Consensus 25 ~~~~~~~i~R~~p~~~-~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~ 103 (259)
++++||+||||||+++ .+||||+|+|++. +++||||+|++||+++||||+||+|||+||||||||+|||+++|||+|+
T Consensus 2 ~~~i~~~I~R~~p~~~~~~~~~~~y~v~~~-~~~tvLd~L~~i~~~~d~~l~fr~~Cr~giCGsC~m~ING~~~LAC~~~ 80 (241)
T 2bs2_B 2 GRMLTIRVFKYDPQSAVSKPHFQEYKIEEA-PSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTL 80 (241)
T ss_dssp CCEEEEEEEECCTTCTTCCCEEEEEEEECC-TTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCB
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHHEE
T ss_conf 945899999879999887873489996489-9985999999997415997278567777888766778899222455320
Q ss_pred HHCC-CCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 0004-78518986489804411245104799988754210346663---1101112207776544668888873131322
Q gi|254781044|r 104 MKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP---KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 (259)
Q Consensus 104 ~~~~-~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~---~~~~e~~qsped~~~~~~~~~CI~CG~C~sa 179 (259)
+.++ +++|+||||++||||||||||+++||++++++.+|+..... ..+.+..++|+++++++++++||+||+|+++
T Consensus 81 ~~~~~~~~i~iePl~~fpVikDLvVD~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ci~Cg~C~~~ 160 (241)
T 2bs2_B 81 TKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAA 160 (241)
T ss_dssp GGGCTTSEEEEECCTTSEEEETTEEECHHHHHHHHHHTTCSCCCSSCCCTTSCCCCCCHHHHHHHHHHHTCCCCCHHHHT
T ss_pred EEECCCCEEEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHC
T ss_conf 00248982899677668502216750289888776511443356666776632244570245541245666716866645
Q ss_pred CCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHH-HHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 8200102221011478899988516888431388-999622866527676647345518997888999999999998612
Q gi|254781044|r 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 (259)
Q Consensus 180 CP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~e-rl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk 258 (259)
||++..++ .|+||+++.+++|+..|+||....+ +++.+.+++|+|+|++|++|+++||+||++++.|..|||++++++
T Consensus 161 CP~~~~~~-~~~gp~~~~~~~r~~~d~rd~~~~~~~~~~~~~~~gi~~C~~c~~C~~vCP~gI~~~~~I~~lrr~~~~~~ 239 (241)
T 2bs2_B 161 CGTKIMRE-DFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMVSVN 239 (241)
T ss_dssp CHHHHHCT-TCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99843254-65662678888774118721668999999852777743798858800028899998999999999999711
Q ss_pred C
Q ss_conf 9
Q gi|254781044|r 259 I 259 (259)
Q Consensus 259 l 259 (259)
|
T Consensus 240 ~ 240 (241)
T 2bs2_B 240 M 240 (241)
T ss_dssp -
T ss_pred C
T ss_conf 7