HHsearch results for GI: 254781044 and protein with PDBid: 2fdn_A

>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A

Probab=96.26  E-value=0.00073  Score=42.95  Aligned_cols=46  Identities=28%  Similarity=0.642  Sum_probs=30.8

Q ss_pred             HHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf             88887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r  168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL  241 (259)
Q Consensus       168 ~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI  241 (259)
                      .+|+.||.|+.+||.-....+                +.+        ..+ +   -..|+.||.|..+||.+-
T Consensus         6 d~C~~Cg~C~~~CP~~ai~~~----------------~~~--------~~i-~---~~~C~~Cg~C~~~CP~~A   51 (55)
T 2fdn_A            6 EACISCGACEPECPVNAISSG----------------DDR--------YVI-D---ADTCIDCGACAGVCPVDA   51 (55)
T ss_dssp             TTCCCCCTTGGGCTTCCEECC----------------SSS--------CEE-C---TTTCCCCCHHHHTCTTCC
T ss_pred             CCCCCHHHHHHHCCCCCEECC----------------CCE--------EEE-C---HHHCCCCCCCHHHCCCCC
T ss_conf             689897899977772248857----------------997--------997-6---779929998622577657