HHsearch results for GI: 254781044 and protein with PDBid: 2vpz_B
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=92.28 E-value=0.015 Score=34.89 Aligned_cols=47 Identities=26% Similarity=0.647 Sum_probs=30.3
Q ss_pred HHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC---------CHH
Q ss_conf 46688888731313228200102221011478899988516888431388999622866527676647---------345
Q gi|254781044|r 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM---------NCT 234 (259)
Q Consensus 164 ~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~---------~C~ 234 (259)
..+...||.|+.|+.+||--. -|.. +. .-+..|+.|. +|+
T Consensus 84 ~id~~kCiGC~~C~~aCPy~a----~~~~-------------~~--------------~~~~KC~~C~~r~~~G~~PaCv 132 (195)
T 2vpz_B 84 LVDPKKCIACGACIAACPYDA----RYLH-------------PA--------------GYVSKCTFCAHRLEKGKVPACV 132 (195)
T ss_dssp EECTTTCCCCCHHHHHCTTCC----CEEC-------------TT--------------SSEECCCTTHHHHHTTCCCHHH
T ss_pred EECHHHCCCHHHHHHCCCCCC----EEEC-------------CC--------------CEEEEECCCHHHHHCCCCCCHH
T ss_conf 965546244104754699998----5747-------------88--------------7278804864046548867306
Q ss_pred HHCCCCC
Q ss_conf 5189978
Q gi|254781044|r 235 QSCPKGL 241 (259)
Q Consensus 235 ~vCPkgI 241 (259)
++||.+-
T Consensus 133 ~~Cp~~A 139 (195)
T 2vpz_B 133 ETCPTYC 139 (195)
T ss_dssp HSCTTCC
T ss_pred HHCCCCC
T ss_conf 5586034