BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781044|ref|YP_003065457.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Liberibacter asiaticus str. psy62] (259 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|295687609|ref|YP_003591302.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Caulobacter segnis ATCC 21756] gi|295429512|gb|ADG08684.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Caulobacter segnis ATCC 21756] Length = 260 Score = 320 bits (821), Expect = 9e-86, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 206/260 (79%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+VK GK W AP G K +K ++IYR++P+ GNP DTY VD+D GPMVL Sbjct: 1 MVELALPKNSQVKSGKHWPAPAGAKKVKTFKIYRYDPETGGNPRWDTYDVDMDAVGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 D LLYIKN IDPTL RRSCREG+CGSC MNI G NTLAC ++ G + + PLPHM Sbjct: 61 DALLYIKNTIDPTLAFRRSCREGVCGSCSMNIGGRNTLACTHGWAEVPGKAVQISPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++ FY+Q+ SIEPWL T +P+P E QS EDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLIPDLTLFYAQYASIEPWLHTDTPEPQAEWRQSPEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LL AYRWLIDSRDE G+RLD LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNGDKYLGPAALLHAYRWLIDSRDEATGDRLDALEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R + Sbjct: 241 GLNPAKAIAEIKKMMVERVV 260 >gi|16127756|ref|NP_422320.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter crescentus CB15] gi|221236577|ref|YP_002519014.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter crescentus NA1000] gi|13425258|gb|AAK25488.1| succinate dehydrogenase, iron-sulfur protein [Caulobacter crescentus CB15] gi|220965750|gb|ACL97106.1| succinate dehydrogenase iron-sulfur protein [Caulobacter crescentus NA1000] Length = 260 Score = 320 bits (821), Expect = 9e-86, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 207/260 (79%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+VK GK W AP G K +K ++IYR++P++ GNP DTY VD+D GPMVL Sbjct: 1 MVELALPKNSQVKSGKHWPAPAGAKKVKTFKIYRYDPESGGNPRWDTYDVDVDAVGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 D LLYIKN IDPTL RRSCREG+CGSC MNI G NTLAC ++ G + + PLPHM Sbjct: 61 DALLYIKNTIDPTLAFRRSCREGVCGSCSMNIGGRNTLACTHGWAEVPGKAVQISPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++ FY+Q+ SIEPWL T +P+P E QS EDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLIPDLTLFYAQYASIEPWLHTDTPEPQTEWKQSPEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LL AYRWLIDSRDE G+RLD LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNGDKYLGPAALLHAYRWLIDSRDEATGDRLDALEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R + Sbjct: 241 GLNPAKAIAEIKKMMVERVV 260 >gi|328541808|ref|YP_004301917.1| Succinate dehydrogenase iron-sulfur subunit [polymorphum gilvum SL003B-26A1] gi|326411560|gb|ADZ68623.1| Succinate dehydrogenase iron-sulfur subunit [Polymorphum gilvum SL003B-26A1] Length = 260 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 198/260 (76%), Positives = 229/260 (88%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+V GK+W+ P G KNL+EYRIYRWNPD+ NP +DTYYVD+D+CGPMVL Sbjct: 1 MVQLTLPKNSKVTEGKVWDKPAGAKNLREYRIYRWNPDDGRNPRVDTYYVDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 DGL+YIKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K M ++ GA+ +YPLPHM Sbjct: 61 DGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVAGAVVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ FY+QHRSIEPWL+TVSP P KE QS EDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTRFYAQHRSIEPWLQTVSPAPEKEWRQSQEDRAKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPAILLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC+Q+CPK Sbjct: 181 CPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCSQACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R++ Sbjct: 241 GLNPAKAIAEIKKMMVERRV 260 >gi|222150045|ref|YP_002551002.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium vitis S4] gi|221737027|gb|ACM37990.1| succinate dehydrogenase iron-sulfur [Agrobacterium vitis S4] Length = 259 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 199/259 (76%), Positives = 231/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++K GK+W P+G KNL+EY+IYRW+PD+ NP +DTYYVD+D+CGPMVL Sbjct: 1 MVELTLPKNSQIKPGKVWPKPSGAKNLREYQIYRWSPDDDKNPSLDTYYVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K ++KG + VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGTDEVKGTVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP P KE QSH+DRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPTPVKEWKQSHDDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQVCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|260464206|ref|ZP_05812399.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Mesorhizobium opportunistum WSM2075] gi|259030009|gb|EEW31292.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Mesorhizobium opportunistum WSM2075] Length = 259 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 197/259 (76%), Positives = 229/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++++GK W P G NL+EYRIYRW+PD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVELTLPKNSKIQQGKTWPKPEGATNLREYRIYRWSPDDDENPRIDTYFVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKNKIDPTL LRRSCREGICGSC MNIDG+NTLAC K DI GA+ VYPLPHM Sbjct: 61 DALLWIKNKIDPTLALRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQ 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QH SIEPWLKTVSP+PAKE LQSHEDR+K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHASIEPWLKTVSPEPAKEWLQSHEDREKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPATLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|110635572|ref|YP_675780.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium sp. BNC1] gi|110286556|gb|ABG64615.1| succinate dehydrogenase subunit B [Chelativorans sp. BNC1] Length = 259 Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats. Identities = 191/259 (73%), Positives = 223/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+VK+GK+W P G NL+EYRIYRW+PD+ NP +DTYYVDLD+CGPMVL Sbjct: 1 MVQLTLPKNSKVKQGKVWPKPEGATNLREYRIYRWSPDDTENPRVDTYYVDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGL++IKNK+D TLT RRSCREGICGSC MNIDG NTLAC K M DI GA+ VYPLPHM Sbjct: 61 DGLIWIKNKVDSTLTFRRSCREGICGSCAMNIDGANTLACTKGMDDIGGAVRVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S Y+Q SIEPWL+TV+P+PA E QSHEDR K+DGLYEC++C CC TSC Sbjct: 121 VVKDLVPDLSIPYAQLSSIEPWLQTVTPEPAIEWKQSHEDRAKLDGLYECILCFCCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN +RYLGPA+LLQAYRWLIDSRDE GERLD LEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGERYLGPAVLLQAYRWLIDSRDEATGERLDKLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|13473605|ref|NP_105173.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium loti MAFF303099] gi|14024355|dbj|BAB50959.1| succinate dehydrogenase iron-sulfur protein subunit [Mesorhizobium loti MAFF303099] Length = 259 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 198/259 (76%), Positives = 231/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++++GK W P G NL+EYRIYRW+PD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVELTLPKNSKIQQGKTWPKPEGATNLREYRIYRWSPDDDENPRIDTYFVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKNKIDPTLTLRRSCREGICGSC MNIDG+NTLAC K DI GA+ VYPLPHM Sbjct: 61 DALLWIKNKIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQ 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QH SIEPWLKTVSP+PAKE LQSHEDR+K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHASIEPWLKTVSPQPAKEWLQSHEDREKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPATLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|15889898|ref|NP_355579.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium tumefaciens str. C58] gi|15157849|gb|AAK88364.1| succinate dehydrogenase iron-sulfur [Agrobacterium tumefaciens str. C58] Length = 259 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 230/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++ GK+W P G KN++EYRIYRWNPD+ NP +DTYY+D+D+CGPMVL Sbjct: 1 MVELALPKNSQISEGKVWPKPDGAKNVREYRIYRWNPDDGQNPRIDTYYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LLYIKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M++IKG + VYPLPHM Sbjct: 61 DALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE QSHEDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|86138972|ref|ZP_01057543.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. MED193] gi|85824203|gb|EAQ44407.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. MED193] Length = 259 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 173/259 (66%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G N+++++IYRWNPD+ NP +DTY++D+D CGPM+L Sbjct: 1 MVEFALPKNSKITTGKTWPKPEGATNVRKFKIYRWNPDDGKNPQVDTYFLDMDKCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MN+DG NTLAC+ + ++KG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNVDGINTLACIYGLDEVKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNAPAKEWRQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LL AYRW+IDSRDE ERLD LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDKYLGPAALLHAYRWIIDSRDEATPERLDQLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA+AIA IK M++DR + Sbjct: 241 LNPAEAIAHIKHMMVDRAV 259 >gi|254474858|ref|ZP_05088244.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria sp. R11] gi|214029101|gb|EEB69936.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria sp. R11] Length = 259 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G N++++ IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVEFALPKNSKITTGKTWPKPEGATNVRKFSIYRWNPDDGKNPRVDTYFVDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAI+ IK M++DR + Sbjct: 241 LNPAKAISHIKQMMVDRAV 259 >gi|307942787|ref|ZP_07658132.1| succinate dehydrogenase iron-sulfur subunit [Roseibium sp. TrichSKD4] gi|307773583|gb|EFO32799.1| succinate dehydrogenase iron-sulfur subunit [Roseibium sp. TrichSKD4] Length = 260 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 193/260 (74%), Positives = 223/260 (85%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+V GK+W P G NL EYRIYRWNP++ NP +DTY+VD D+CGPMVL Sbjct: 1 MVQLTLPRNSQVTEGKVWPKPEGASNLTEYRIYRWNPEDGRNPRVDTYFVDKDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 DGL+YIKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K ++ G + +YPLPHM Sbjct: 61 DGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGTDEVAGDVVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DM+ FY+QHRSIEPWLKT +P P KE QSHEDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDMTRFYAQHRSIEPWLKTTTPTPEKEWRQSHEDRSKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPAILLQAYRWLIDSRDE GERLD+LEDPFRLYRCHTIMNC+Q+CPK Sbjct: 181 CPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCSQACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK ML++R++ Sbjct: 241 GLNPAKAIAEIKKMLVERRV 260 >gi|260431518|ref|ZP_05785489.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415346|gb|EEX08605.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 259 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 179/259 (69%), Positives = 216/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G N+++++IYRWNPD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVQLTLPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGQNPRVDTYFVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+YIKNKIDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIYIKNKIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + P KE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNPPEKEWRQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R + Sbjct: 241 LNPAKAIAEIKKLMVERTV 259 >gi|325294011|ref|YP_004279875.1| succinate dehydrogenase iron-sulfur protein [Agrobacterium sp. H13-3] gi|325061864|gb|ADY65555.1| succinate dehydrogenase iron-sulfur protein [Agrobacterium sp. H13-3] Length = 259 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 200/259 (77%), Positives = 230/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++ GK+W P G KN++EYRIYRWNPD+ NP +DTYY+D+D+CGPMVL Sbjct: 1 MVELALPKNSQISEGKVWPKPDGAKNVREYRIYRWNPDDGQNPRIDTYYIDIDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LLYIKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M++IKG + VYPLPHM Sbjct: 61 DALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE QSHEDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLD+LEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCAQACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|126740502|ref|ZP_01756189.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter sp. SK209-2-6] gi|126718303|gb|EBA15018.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter sp. SK209-2-6] Length = 259 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 177/259 (68%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G N+++++IYRWNPD+ NP +DTY+VD+DNCGPM+L Sbjct: 1 MVEFALPKNSKITTGKTWPKPQGATNVRKFKIYRWNPDDGKNPSVDTYFVDMDNCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNI G NTLAC+ M ++KG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGINTLACIYGMDEVKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNAPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LL AYRW+IDSRDE ERLD LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDKYLGPAALLHAYRWIIDSRDEATPERLDQLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK M++DR + Sbjct: 241 LNPAKAIAHIKHMMVDRAV 259 >gi|254512512|ref|ZP_05124579.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae bacterium KLH11] gi|221536223|gb|EEE39211.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae bacterium KLH11] Length = 259 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 180/259 (69%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G N+++++IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGQNPRVDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGL+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DGLIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R + Sbjct: 241 LNPAKAIAEIKKMMVERAV 259 >gi|319780756|ref|YP_004140232.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166644|gb|ADV10182.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 259 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 198/259 (76%), Positives = 229/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++K GK W P G NL+EYRIYRW+PD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVELTLPKNSQIKPGKTWPKPEGATNLREYRIYRWSPDDDENPRIDTYFVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKNKIDPTLTLRRSCREGICGSC MNIDG+NTLAC K DI GA+ VYPLPHM Sbjct: 61 DALLWIKNKIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQ 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QH SI+PWLKTVSP+PAKE LQSHEDR+K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHASIQPWLKTVSPEPAKEWLQSHEDREKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPATLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|182679662|ref|YP_001833808.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635545|gb|ACB96319.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 259 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 188/259 (72%), Positives = 218/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S V GK W P G KN+KEY IYRWNP++ NP +DTY+VD DNC PMVL Sbjct: 1 MVQFTLPKNSTVTTGKTWPKPAGAKNVKEYHIYRWNPEDGANPRIDTYFVDRDNCAPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+YIK+ IDPTLT RRSCREGICGSC MNIDGTNTLAC K M ++KGA+ +YPLPHM Sbjct: 61 DALIYIKSNIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGAVKIYPLPHMM 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QH SIEPWLKT +P P KE QS EDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHASIEPWLKTTTPAPEKEWRQSPEDRSKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LLQAYRWLIDSRDE GERLDN+EDPFRLYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLQAYRWLIDSRDETTGERLDNVEDPFRLYRCHTIMNCAKACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKTMMIERQL 259 >gi|167648792|ref|YP_001686455.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter sp. K31] gi|167351222|gb|ABZ73957.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Caulobacter sp. K31] Length = 260 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 204/260 (78%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S V+ GK W AP G KN + +++YR++P++ NP DTY VDLD CGPMVL Sbjct: 1 MVQLTLPKNSTVQNGKTWPAPAGAKNTRSFKVYRYDPEDGRNPRWDTYEVDLDACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 D LLYIKN IDPTL RRSCREG+CGSC MNI G NTLAC D G + + PLP Sbjct: 61 DALLYIKNTIDPTLAFRRSCREGVCGSCAMNIGGRNTLACTHGHADTPGKAVQISPLPSQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++ FY+Q+ SIEPWL TV+P+P E QS EDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLIPDLTLFYAQYASIEPWLHTVTPEPQTEWKQSPEDRSKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LL AYRWLIDSRDE G+RLDNLEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNGDKYLGPATLLHAYRWLIDSRDEATGDRLDNLEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK ML++R + Sbjct: 241 GLNPAKAIAEIKKMLVERVV 260 >gi|159045401|ref|YP_001534195.1| succinate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae DFL 12] gi|157913161|gb|ABV94594.1| succinate dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 259 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+++ GK W P G NL+++++YRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSKIRTGKTWPKPEGATNLRKFQVYRWNPDDGENPRVDTYWVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGANTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH S+ PWL+T + +PA E QS +DR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASVMPWLETKTNRPATEWRQSIDDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAI IK M+++R++ Sbjct: 241 LNPAKAIGAIKKMMVERQV 259 >gi|83950423|ref|ZP_00959156.1| succinate dehydrogenase [Roseovarius nubinhibens ISM] gi|83838322|gb|EAP77618.1| succinate dehydrogenase [Roseovarius nubinhibens ISM] Length = 259 Score = 315 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 218/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ RGK W P G N+++++IYRW+PD+ NP +DTY++D+D CGPMVL Sbjct: 1 MVQLTLPKNSRITRGKTWPKPEGATNIRKFQIYRWSPDDGQNPRVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V++DL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVRDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDREKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK ++++R + Sbjct: 241 LNPAKAIAHIKKLMVERAV 259 >gi|294676293|ref|YP_003576908.1| succinate dehydrogenase, iron-sulfur subunit [Rhodobacter capsulatus SB 1003] gi|294475113|gb|ADE84501.1| succinate dehydrogenase, iron-sulfur subunit [Rhodobacter capsulatus SB 1003] Length = 259 Score = 315 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S+++ GK W P G KN ++++IYRW+PD NP +DTY++D+D CGPMVL Sbjct: 1 MVQFTLPKNSKIRVGKTWPRPEGAKNTRKFKIYRWDPDTGENPRVDTYFLDMDRCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALLKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ FY+QH SI P+L+T + KP KE LQS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLVPDLTLFYAQHASIMPFLQTTTNKPEKEWLQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA LL AYRW+IDSRDE ERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNSDRYLGPAALLHAYRWIIDSRDEATAERLDALEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK +++ R + Sbjct: 241 LNPAKAIAEIKRLMVSRHV 259 >gi|149201366|ref|ZP_01878341.1| succinate dehydrogenase iron-sulfur subunit [Roseovarius sp. TM1035] gi|149145699|gb|EDM33725.1| succinate dehydrogenase iron-sulfur subunit [Roseovarius sp. TM1035] Length = 259 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 179/259 (69%), Positives = 218/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G K +++++IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSRMTTGKTWPKPEGAKTVRKFQIYRWNPDDGKNPRVDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWRQSIEDREKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R + Sbjct: 241 LNPAKAIAEIKKMMVERHV 259 >gi|15966822|ref|NP_387175.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti 1021] gi|150398153|ref|YP_001328620.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium medicae WSM419] gi|307301650|ref|ZP_07581409.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sinorhizobium meliloti BL225C] gi|307316326|ref|ZP_07595770.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sinorhizobium meliloti AK83] gi|15076094|emb|CAC47648.1| Probable succinate dehydrogenase iron-sulfur protein [Sinorhizobium meliloti 1021] gi|150029668|gb|ABR61785.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sinorhizobium medicae WSM419] gi|306898166|gb|EFN28908.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sinorhizobium meliloti AK83] gi|306903348|gb|EFN33937.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sinorhizobium meliloti BL225C] Length = 259 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 200/258 (77%), Positives = 228/258 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++ GK+W P G NL+EYR+YRWNPD+ NP +DTYY+D+D+CGPMVL Sbjct: 1 MVELALPKNSQITEGKVWPKPVGAANLREYRVYRWNPDDGKNPRIDTYYIDIDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M ++KGA+ VYPLPHM Sbjct: 61 DGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAKEWRQSHEDRLKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPAKAI +IK ML++R+ Sbjct: 241 LNPAKAIGEIKKMLVERR 258 >gi|254464819|ref|ZP_05078230.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales bacterium Y4I] gi|206685727|gb|EDZ46209.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales bacterium Y4I] Length = 259 Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 216/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S++ GK W P G N+++++IYRWNPD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVQLSLPKNSKITTGKTWPKPEGASNVRKFKIYRWNPDDGQNPRVDTYFVDMDSCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG +A+YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVAIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE ERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATPERLDQLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK M+++R + Sbjct: 241 LNPAKAIAHIKKMMVERTV 259 >gi|227823649|ref|YP_002827622.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium fredii NGR234] gi|227342651|gb|ACP26869.1| succinate dehydrogenase iron-sulfur protein [Sinorhizobium fredii NGR234] Length = 259 Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 202/258 (78%), Positives = 229/258 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+V GK+W P G NL+EYR+YRWNPD+ NP +DTYY+D+D+CGPMVL Sbjct: 1 MVELALPKNSQVNEGKVWPKPVGATNLREYRVYRWNPDDGKNPRVDTYYIDIDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M +IKG++ VYPLPHM Sbjct: 61 DGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGSVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAKEWRQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPAKAI +IK ML++R+ Sbjct: 241 LNPAKAIGEIKKMLVERR 258 >gi|254470662|ref|ZP_05084065.1| succinate dehydrogenase, iron-sulfur protein [Pseudovibrio sp. JE062] gi|211959804|gb|EEA95001.1| succinate dehydrogenase, iron-sulfur protein [Pseudovibrio sp. JE062] Length = 260 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 191/260 (73%), Positives = 221/260 (85%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK SR+ GK+W P G N++EYRIYRW+PD+ NP +DTYYVD D CGPMVL Sbjct: 1 MAEFQLPKNSRMGEGKVWPKPEGATNVREYRIYRWSPDDGRNPRIDTYYVDADECGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 D L+YIK+K+DPTLT RRSCREGICGSC MNIDGTNTLAC K + I +YPLPHM Sbjct: 61 DALIYIKDKVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGADECSHEIVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ FY+QHRSIEPWLKT +P+P KE LQS+EDRQK+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTRFYAQHRSIEPWLKTTTPEPEKEWLQSYEDRQKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPAILLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC+Q+CPK Sbjct: 181 CPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCSQACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R++ Sbjct: 241 GLNPAKAIAEIKKMMVERRV 260 >gi|163738944|ref|ZP_02146357.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Phaeobacter gallaeciensis BS107] gi|163741812|ref|ZP_02149202.1| succinate dehydrogenase catalytic subunit [Phaeobacter gallaeciensis 2.10] gi|161384985|gb|EDQ09364.1| succinate dehydrogenase catalytic subunit [Phaeobacter gallaeciensis 2.10] gi|161387749|gb|EDQ12105.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Phaeobacter gallaeciensis BS107] Length = 259 Score = 314 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 177/259 (68%), Positives = 212/259 (81%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G N++++ IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVEFALPKNSKITTGKTWPKPEGATNVRKFSIYRWNPDDGKNPQVDTYFVDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + VYPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE ERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATPERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAI+ IK M+++R + Sbjct: 241 LNPAKAISHIKQMMVERAV 259 >gi|154251889|ref|YP_001412713.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Parvibaculum lavamentivorans DS-1] gi|154155839|gb|ABS63056.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Parvibaculum lavamentivorans DS-1] Length = 259 Score = 314 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 181/258 (70%), Positives = 215/258 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+V G+ + A G KN+K +R+YRW+PD+ NP +DTY VDLD CGPMVL Sbjct: 1 MVQLTLPKNSKVTEGETFKAAPGTKNVKRFRVYRWSPDDTANPRIDTYEVDLDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDG NTLAC K + + KG + +YPLPHM Sbjct: 61 DALIKIKNEIDQTLTFRRSCREGICGSCAMNIDGANTLACTKGIDECKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLV D+++FY+QH IEPWL+T S +P KE QSHEDR+K+DGLYEC++CACCSTSC Sbjct: 121 VIKDLVPDLTNFYAQHAFIEPWLQTKSAEPEKEWRQSHEDREKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LLQAYRWLIDSRDE GERLD LEDPFRLYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLQAYRWLIDSRDEATGERLDELEDPFRLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPAKAIA+IK M+++R+ Sbjct: 241 LNPAKAIAEIKKMMVERQ 258 >gi|239833032|ref|ZP_04681361.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ochrobactrum intermedium LMG 3301] gi|239825299|gb|EEQ96867.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ochrobactrum intermedium LMG 3301] Length = 259 Score = 314 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 204/259 (78%), Positives = 231/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G K + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRIQEGKTWPRPDGAKRVTEFRIYRWSPDDDANPSIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKGAI VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGAIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|56695276|ref|YP_165624.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria pomeroyi DSS-3] gi|56677013|gb|AAV93679.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria pomeroyi DSS-3] Length = 259 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 181/259 (69%), Positives = 218/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G NL++++IYRWNPD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVQLTLPKNSRLTTGKTWPKPEGATNLRKFQIYRWNPDDGQNPRVDTYFVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+YIKNK+D TLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIYIKNKVDATLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLDNLEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDNLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R + Sbjct: 241 LNPAKAIAEIKKMMVERTV 259 >gi|114799946|ref|YP_761920.1| succinate dehydrogenase iron-sulfur subunit [Hyphomonas neptunium ATCC 15444] gi|114740120|gb|ABI78245.1| succinate dehydrogenase, iron-sulfur protein [Hyphomonas neptunium ATCC 15444] Length = 260 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 165/258 (63%), Positives = 207/258 (80%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+VK+GK W P G NL+ ++IYR++P+ GNP DTY+VD+D G M+L Sbjct: 1 MVQLTLPQNSKVKKGKTWPKPQGATNLRAFKIYRFSPEEGGNPRWDTYWVDMDRAGTMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHM 119 D L+YIKN IDPTL RRSCREG+CGSC MNI G NT+AC K ++ G + + PLPH Sbjct: 61 DVLIYIKNNIDPTLAFRRSCREGVCGSCAMNIAGRNTIACTKGFEELPSGEVIIAPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D+++FY+QH ++P+L+T +P P KE QS EDR K+DGLYEC++CA CSTS Sbjct: 121 PVVKDLIPDLTNFYAQHAYVQPFLRTSTPTPEKEWRQSAEDRTKLDGLYECILCASCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LLQAYRWLIDSRDE GERLD+LEDPF+LYRCHTIMNCTQ CPK Sbjct: 181 CPSYWWNGDKYLGPAALLQAYRWLIDSRDEATGERLDDLEDPFKLYRCHTIMNCTQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPA+AIAKIK M+++R Sbjct: 241 GLNPAEAIAKIKHMMVER 258 >gi|23502752|ref|NP_698879.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis 1330] gi|254704915|ref|ZP_05166743.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 3 str. 686] gi|261755611|ref|ZP_05999320.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 3 str. 686] gi|23348770|gb|AAN30794.1| succinate dehydrogenase, iron-sulfur protein [Brucella suis 1330] gi|261745364|gb|EEY33290.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 3 str. 686] Length = 259 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 228/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P E LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQMEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|84500174|ref|ZP_00998440.1| succinate dehydrogenase [Oceanicola batsensis HTCC2597] gi|84392108|gb|EAQ04376.1| succinate dehydrogenase [Oceanicola batsensis HTCC2597] Length = 259 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 172/259 (66%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK SR++ GK W P G N+++++IYRWNPD+ P +DTY++D+D CGPMVL Sbjct: 1 MVQFTLPKNSRIRTGKTWPKPDGATNVRKFKIYRWNPDDGETPRVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC M IDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMMIDGINTLACIYGLDEIKGDVTIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CST+C Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA+AI+ IK M+++R + Sbjct: 241 LNPARAISNIKQMMVERTV 259 >gi|254717968|ref|ZP_05179779.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. 83/13] gi|265982911|ref|ZP_06095646.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. 83/13] gi|306838920|ref|ZP_07471747.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. NF 2653] gi|264661503|gb|EEZ31764.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. 83/13] gi|306405990|gb|EFM62242.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. NF 2653] Length = 259 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 228/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+ KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPESQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|99078506|ref|YP_611764.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria sp. TM1040] gi|99035644|gb|ABF62502.1| succinate dehydrogenase subunit B [Ruegeria sp. TM1040] Length = 259 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 215/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK SR+ GK W P G N+++++IYRWNPD+ NP +DTY++D+D CGPMVL Sbjct: 1 MVEFALPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGKNPSVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLDNLEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDNLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK ++++R + Sbjct: 241 LNPAKAIAHIKKLMVERTV 259 >gi|17986446|ref|NP_539080.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 1 str. 16M] gi|62290757|ref|YP_222550.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1 str. 9-941] gi|82700668|ref|YP_415242.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis biovar Abortus 2308] gi|148560298|ref|YP_001259725.1| succinate dehydrogenase iron-sulfur subunit [Brucella ovis ATCC 25840] gi|163843924|ref|YP_001628328.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis ATCC 23445] gi|189024970|ref|YP_001935738.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus S19] gi|225853338|ref|YP_002733571.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis ATCC 23457] gi|237816263|ref|ZP_04595256.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella abortus str. 2308 A] gi|254694534|ref|ZP_05156362.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] gi|254696159|ref|ZP_05157987.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254707571|ref|ZP_05169399.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M163/99/10] gi|254708892|ref|ZP_05170703.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis B2/94] gi|254713683|ref|ZP_05175494.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M644/93/1] gi|254715966|ref|ZP_05177777.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M13/05/1] gi|254731077|ref|ZP_05189655.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|256030418|ref|ZP_05444032.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M292/94/1] gi|256045509|ref|ZP_05448392.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256059877|ref|ZP_05450064.1| succinate dehydrogenase iron-sulfur subunit [Brucella neotomae 5K33] gi|256112236|ref|ZP_05453157.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 3 str. Ether] gi|256158402|ref|ZP_05456300.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M490/95/1] gi|256253822|ref|ZP_05459358.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti B1/94] gi|256258299|ref|ZP_05463835.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|256263175|ref|ZP_05465707.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv. 2 str. 63/9] gi|256370303|ref|YP_003107814.1| succinate dehydrogenase catalytic subunit [Brucella microti CCM 4915] gi|260546022|ref|ZP_05821762.1| succinate dehydrogenase catalytic subunit [Brucella abortus NCTC 8038] gi|260562818|ref|ZP_05833304.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv. 1 str. 16M] gi|260758806|ref|ZP_05871154.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|260760530|ref|ZP_05872873.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260884606|ref|ZP_05896220.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|261214853|ref|ZP_05929134.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] gi|261217730|ref|ZP_05932011.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M13/05/1] gi|261220956|ref|ZP_05935237.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti B1/94] gi|261315056|ref|ZP_05954253.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M163/99/10] gi|261316387|ref|ZP_05955584.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis B2/94] gi|261321422|ref|ZP_05960619.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M644/93/1] gi|261323848|ref|ZP_05963045.1| succinate dehydrogenase iron-sulfur subunit [Brucella neotomae 5K33] gi|265987460|ref|ZP_06100017.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M292/94/1] gi|265991932|ref|ZP_06104489.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 1 str. Rev.1] gi|265993664|ref|ZP_06106221.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 3 str. Ether] gi|265996915|ref|ZP_06109472.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M490/95/1] gi|297247144|ref|ZP_06930862.1| succinate dehydrogenase iron-sulfur protein [Brucella abortus bv. 5 str. B3196] gi|306843356|ref|ZP_07475957.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. BO1] gi|17982042|gb|AAL51344.1| succinate dehydrogenase iron-sulfur protein [Brucella melitensis bv. 1 str. 16M] gi|62196889|gb|AAX75189.1| SdhB, succinate dehydrogenase, iron-sulfur protein [Brucella abortus bv. 1 str. 9-941] gi|82616769|emb|CAJ11856.1| 4Fe-4S ferredoxin, iron-sulfur binding domain:Succinate dehydrogenase/fumarate reductase iron-sulfur protein:2Fe-2S ferredoxin [Brucella melitensis biovar Abortus 2308] gi|148371555|gb|ABQ61534.1| succinate dehydrogenase, iron-sulfur protein [Brucella ovis ATCC 25840] gi|163674647|gb|ABY38758.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella suis ATCC 23445] gi|189020542|gb|ACD73264.1| succinate dehydrogenase catalytic subunit [Brucella abortus S19] gi|225641703|gb|ACO01617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella melitensis ATCC 23457] gi|237788330|gb|EEP62545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella abortus str. 2308 A] gi|256000466|gb|ACU48865.1| succinate dehydrogenase catalytic subunit [Brucella microti CCM 4915] gi|260096129|gb|EEW80005.1| succinate dehydrogenase catalytic subunit [Brucella abortus NCTC 8038] gi|260152834|gb|EEW87926.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv. 1 str. 16M] gi|260669124|gb|EEX56064.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|260670962|gb|EEX57783.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260874134|gb|EEX81203.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|260916460|gb|EEX83321.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] gi|260919540|gb|EEX86193.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti B1/94] gi|260922819|gb|EEX89387.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M13/05/1] gi|261294112|gb|EEX97608.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M644/93/1] gi|261295610|gb|EEX99106.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis B2/94] gi|261299828|gb|EEY03325.1| succinate dehydrogenase iron-sulfur subunit [Brucella neotomae 5K33] gi|261304082|gb|EEY07579.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M163/99/10] gi|262551383|gb|EEZ07373.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti M490/95/1] gi|262764645|gb|EEZ10566.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 3 str. Ether] gi|263002998|gb|EEZ15291.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis bv. 1 str. Rev.1] gi|263093081|gb|EEZ17231.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv. 2 str. 63/9] gi|264659657|gb|EEZ29918.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis M292/94/1] gi|297174313|gb|EFH33660.1| succinate dehydrogenase iron-sulfur protein [Brucella abortus bv. 5 str. B3196] gi|306276047|gb|EFM57747.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. BO1] gi|326409902|gb|ADZ66967.1| succinate dehydrogenase catalytic subunit [Brucella melitensis M28] gi|326539615|gb|ADZ87830.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella melitensis M5-90] Length = 259 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 202/259 (77%), Positives = 229/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|85706754|ref|ZP_01037846.1| succinate dehydrogenase [Roseovarius sp. 217] gi|85668812|gb|EAQ23681.1| succinate dehydrogenase [Roseovarius sp. 217] Length = 259 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 179/259 (69%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G K +++++IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSRMTTGKTWPKPEGAKTVRKFQIYRWNPDDGKNPQVDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + PAKE QS EDR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNAPAKEWKQSIEDREKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK +++R + Sbjct: 241 LNPAKAIAEIKKQMVERHV 259 >gi|254292681|ref|YP_003058704.1| succinate dehydrogenase iron-sulfur subunit [Hirschia baltica ATCC 49814] gi|254041212|gb|ACT58007.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hirschia baltica ATCC 49814] Length = 261 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 165/261 (63%), Positives = 204/261 (78%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM 58 MV++ LP+ S+VK GK W+ P G +LK +RIYR++PD NP DTY VD GPM Sbjct: 1 MVQLTLPQNSKVKNGKTWSGPKSEGASSLKTFRIYRFDPDTGENPRWDTYEVDTKLFGPM 60 Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 VLD L+YIKN++DPTL RRSCREG+CGSC MNI G NT+AC K + KG I + PLPH Sbjct: 61 VLDALIYIKNEVDPTLAFRRSCREGVCGSCAMNIGGRNTIACTKGHDEFKGKITISPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D+S FY+QH + P+L+T +P+P +E Q+ ++R+K+DGLYEC+MCA CST Sbjct: 121 QPVIKDLVPDLSQFYAQHAYVAPYLQTTTPEPQREWKQTPQEREKLDGLYECIMCASCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN D+YLGPA LLQAYRWLIDSRDE G RLD+LEDPF+LYRCHTIMNC Q CP Sbjct: 181 SCPSYWWNGDKYLGPAALLQAYRWLIDSRDEETGSRLDDLEDPFKLYRCHTIMNCAQVCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGLNPA+AIA IK M+++R++ Sbjct: 241 KGLNPAEAIASIKTMMVERRV 261 >gi|161619818|ref|YP_001593705.1| succinate dehydrogenase iron-sulfur subunit [Brucella canis ATCC 23365] gi|260567610|ref|ZP_05838080.1| succinate dehydrogenase catalytic subunit [Brucella suis bv. 4 str. 40] gi|161336629|gb|ABX62934.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella canis ATCC 23365] gi|260157128|gb|EEW92208.1| succinate dehydrogenase catalytic subunit [Brucella suis bv. 4 str. 40] Length = 259 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 200/259 (77%), Positives = 228/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P E LQSHEDR+K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQMEWLQSHEDRRKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|118590537|ref|ZP_01547939.1| succinate dehydrogenase iron-sulfur subunit [Stappia aggregata IAM 12614] gi|118437000|gb|EAV43639.1| succinate dehydrogenase iron-sulfur subunit [Stappia aggregata IAM 12614] Length = 260 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 193/260 (74%), Positives = 227/260 (87%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+V GK+W+ P G NL+EYRIYRWNPD+ NP +DTY+++ D+CGPMVL Sbjct: 1 MVQLTLPRNSQVTEGKVWDKPEGATNLREYRIYRWNPDDGRNPRVDTYFINADDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 DGL+YIKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K M ++ G + +YPLPHM Sbjct: 61 DGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVAGDVVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ FY+QHRSIEPWLKTVSP P KE QSHEDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTRFYAQHRSIEPWLKTVSPPPEKEWRQSHEDRVKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPAILLQAYRWLIDSRDE GERLD+LEDPFRLYRCHTIMNC+Q+CPK Sbjct: 181 CPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCSQACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R++ Sbjct: 241 GLNPAKAIAEIKKMMVERRV 260 >gi|260425826|ref|ZP_05779806.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] gi|260423766|gb|EEX17016.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] Length = 259 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 216/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S+++ GK W P G N++ ++IYRWNP++ NP +DTY++D+D CGPMVL Sbjct: 1 MVQFTLPKNSKIRTGKTWPKPQGATNVRAFKIYRWNPEDGENPRVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +P KE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPEKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNSDRYLGPAALLHAYRWIIDSRDEATGERLDALEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAK+IA+IK M+L+R + Sbjct: 241 LNPAKSIAEIKRMMLNRHV 259 >gi|259415014|ref|ZP_05738936.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] gi|259348924|gb|EEW60678.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] Length = 259 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK SR+ GK W P G N+++++IYRWNPD+ NP +DTY++D+D CGPMVL Sbjct: 1 MVEFALPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGKNPQVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+ + ++KG + +YPLPHM Sbjct: 61 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEVKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERL+ LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLNQLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK M+++R + Sbjct: 241 LNPAKAIAHIKKMMVERTV 259 >gi|300024739|ref|YP_003757350.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526560|gb|ADJ25029.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hyphomicrobium denitrificans ATCC 51888] Length = 259 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 186/259 (71%), Positives = 221/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S++ RGK WN P E + KE+RIYRWNPD+ NP +DTY VD CGPMVL Sbjct: 1 MVQLTLPKNSKLTRGKTWNQPDREGDWKEFRIYRWNPDDSENPRIDTYQVDRKQCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC+K M DIKG + VYPLPH+ Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKGMDDIKGPVKVYPLPHLE 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKT + P KE QS +DR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTDTATPPKEWKQSRDDRSKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPAILLQAYRW+IDSRDE GERLDNLEDPFRLYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNSDRYLGPAILLQAYRWVIDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 L+PAKAIA++K ++++R++ Sbjct: 241 LSPAKAIAELKKLMVERRV 259 >gi|153008289|ref|YP_001369504.1| succinate dehydrogenase iron-sulfur subunit [Ochrobactrum anthropi ATCC 49188] gi|151560177|gb|ABS13675.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ochrobactrum anthropi ATCC 49188] Length = 259 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 204/259 (78%), Positives = 230/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR + GK W P G K + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRPQEGKTWPRPDGAKRVTEFRIYRWSPDDDANPSIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKGAI VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGAIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|255263463|ref|ZP_05342805.1| succinate dehydrogenase iron-sulfur subunit [Thalassiobium sp. R2A62] gi|255105798|gb|EET48472.1| succinate dehydrogenase iron-sulfur subunit [Thalassiobium sp. R2A62] Length = 259 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+K GK W P G NL+ + IYRWNPD+ NP +DTY+VD+D CGPM+L Sbjct: 1 MVQLTLPKNSRMKTGKTWPKPEGATNLRTFHIYRWNPDDGKNPQVDTYFVDIDTCGPMML 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IK++IDPTLT RRSCREGICGSC MNI G NTLAC+ + D+ G + +YPLPHM Sbjct: 61 DALIKIKSEIDPTLTFRRSCREGICGSCAMNIGGINTLACLYGLDDVTGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA++K M+++R + Sbjct: 241 LNPAKAIAEVKKMMVERTV 259 >gi|163744263|ref|ZP_02151623.1| succinate dehydrogenase iron-sulfur subunit [Oceanibulbus indolifex HEL-45] gi|161381081|gb|EDQ05490.1| succinate dehydrogenase iron-sulfur subunit [Oceanibulbus indolifex HEL-45] Length = 259 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G NL+E+ +YRWNPD+ NP +DTY+VD+D+CGPM+L Sbjct: 1 MVQLTLPKNSRMTSGKTWPKPAGATNLREFHVYRWNPDDGKNPALDTYFVDMDDCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC M++I G + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACTYGMEEINGVVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI+PWL+T +P+P KE QS +DR K+DGLYEC+MCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIQPWLETETPEPRKEWKQSIDDRAKLDGLYECIMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA AIA IK ++++R + Sbjct: 241 LNPAAAIANIKKLMVERTV 259 >gi|126730324|ref|ZP_01746135.1| succinate dehydrogenase catalytic subunit [Sagittula stellata E-37] gi|126709057|gb|EBA08112.1| succinate dehydrogenase catalytic subunit [Sagittula stellata E-37] Length = 260 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 173/260 (66%), Positives = 212/260 (81%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK SR++ GK W P G N++ ++IYRWNPD+ NP +DTY++++D CGPMVL Sbjct: 1 MVQFTLPKNSRIRTGKTWPKPEGATNVRAFKIYRWNPDDGENPRVDTYFLNMDECGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHM 119 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+ + + +YPLPHM Sbjct: 61 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIDGDEVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTS Sbjct: 121 PVVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDQLEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+L+R + Sbjct: 241 GLNPAKAIAEIKKMMLERAV 260 >gi|114769282|ref|ZP_01446908.1| succinate dehydrogenase catalytic subunit [alpha proteobacterium HTCC2255] gi|114550199|gb|EAU53080.1| succinate dehydrogenase catalytic subunit [alpha proteobacterium HTCC2255] Length = 259 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR+ GK W P G N++ ++IYRWNPD NP +DTY++D+D CGPMVL Sbjct: 1 MVELTLPKNSRMTVGKTWPKPEGATNIRAFKIYRWNPDTGENPSLDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IK+++DPTLT RRSCREGICGSC MN+DG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALVKIKSEVDPTLTFRRSCREGICGSCAMNVDGINTLACIYGLDEIKGDVKIYPLPHME 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D++HFY+QH SI PWL+T + KPA E QS EDR+K+DGLYECVMCACCSTSC Sbjct: 121 VIKDLIPDLTHFYAQHASIMPWLETKTNKPATEWRQSIEDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD L+DPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELQDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK +++R I Sbjct: 241 LNPAKAIAEIKKKMVERTI 259 >gi|306842945|ref|ZP_07475579.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. BO2] gi|306286873|gb|EFM58398.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brucella sp. BO2] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 203/259 (78%), Positives = 230/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNSDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|89068118|ref|ZP_01155535.1| succinate dehydrogenase [Oceanicola granulosus HTCC2516] gi|89046357|gb|EAR52414.1| succinate dehydrogenase [Oceanicola granulosus HTCC2516] Length = 260 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 171/260 (65%), Positives = 209/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK SR+ GK W P G NL++ IYRWNPD+ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVEFTLPKNSRITVGKTWPKPEGATNLRKVTIYRWNPDDGKNPRLDTYWVDMDSCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L+ IK +IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +I I +YPLPHM Sbjct: 61 DALIKIKTEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIGGDEIKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++HFY+QH +I PWL+T + +PAKE QS EDR+K+DGLYECVMCA CST+ Sbjct: 121 PVVKDLIPDLTHFYAQHAAIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D++LGPA LL AYRW++DSRDE GERLD LEDPF+LYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNGDKFLGPAALLNAYRWIVDSRDEATGERLDQLEDPFKLYRCHTIMNCAKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPA+AI IK ++++R + Sbjct: 241 GLNPARAIQHIKKLMVERAV 260 >gi|294851142|ref|ZP_06791815.1| succinate dehydrogenase iron-sulfur protein [Brucella sp. NVSL 07-0026] gi|294819731|gb|EFG36730.1| succinate dehydrogenase iron-sulfur protein [Brucella sp. NVSL 07-0026] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 229/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRD+ +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDKAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|222087466|ref|YP_002546003.1| succinate dehydrogenase subunit B [Agrobacterium radiobacter K84] gi|221724914|gb|ACM28070.1| succinate dehydrogenase subunit B [Agrobacterium radiobacter K84] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 195/259 (75%), Positives = 231/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G KN +E+R+YRW+PD+ NP +DTYY+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGAKNTREFRVYRWSPDDGLNPSIDTYYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K + +IKG + +YPLPH+ Sbjct: 61 DGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDEIKGTVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPPPAKEWKQSHEDRLKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|86359475|ref|YP_471367.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli CFN 42] gi|86283577|gb|ABC92640.1| succinate dehydrogenase subunit B, iron-sulfur protein [Rhizobium etli CFN 42] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 197/259 (76%), Positives = 231/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DI GA+ +YPLPH+ Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|254461469|ref|ZP_05074885.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales bacterium HTCC2083] gi|206678058|gb|EDZ42545.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae bacterium HTCC2083] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G N+++++IYRWNPD+ NP +DTY+VD+DNCGPM+L Sbjct: 1 MVQLTLPKNSRMTTGKTWPKPEGANNIRKFQIYRWNPDDGKNPSVDTYWVDMDNCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M ++KG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA AIA+IK M+++R + Sbjct: 241 LNPALAIAEIKKMMVERTV 259 >gi|110678936|ref|YP_681943.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter denitrificans OCh 114] gi|109455052|gb|ABG31257.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter denitrificans OCh 114] Length = 259 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ +GK W P G NL+++ IYRWNPD+ NP +DTY+VD+D CGPM+L Sbjct: 1 MVQLTLPKNSRMTKGKTWPKPEGATNLRKFSIYRWNPDDGQNPRVDTYFVDMDTCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M ++KG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH S PWL+T + +PAKE QS +DR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASTMPWLETKTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA+AIA IK M+++R++ Sbjct: 241 LNPAEAIANIKKMMVERRV 259 >gi|254500747|ref|ZP_05112898.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Labrenzia alexandrii DFL-11] gi|222436818|gb|EEE43497.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Labrenzia alexandrii DFL-11] Length = 260 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 197/260 (75%), Positives = 227/260 (87%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+V GK+W+ P G NL EYRIYRWNPD NP +DTY+V+ D+CGPMVL Sbjct: 1 MVQLTLPRNSQVTDGKVWDKPEGATNLTEYRIYRWNPDEGKNPSVDTYFVNRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 DGL+YIKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K M++I G + +YPLPHM Sbjct: 61 DGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMEEIAGDVVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DM+ FY+QHRSIEPWLKTV+P P KE QSHEDRQK+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDMTRFYAQHRSIEPWLKTVTPAPEKEWRQSHEDRQKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPAILLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC+Q+CPK Sbjct: 181 CPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCSQACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M+++R++ Sbjct: 241 GLNPAKAIAEIKKMMVERRV 260 >gi|190893743|ref|YP_001980285.1| succinate dehydrogenase, iron-sulfur subunit [Rhizobium etli CIAT 652] gi|190699022|gb|ACE93107.1| succinate dehydrogenase protein, iron-sulfur subunit [Rhizobium etli CIAT 652] Length = 259 Score = 312 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 199/259 (76%), Positives = 232/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PA+E QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAQEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|83943854|ref|ZP_00956311.1| succinate dehydrogenase [Sulfitobacter sp. EE-36] gi|83953495|ref|ZP_00962217.1| succinate dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83842463|gb|EAP81631.1| succinate dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83845101|gb|EAP82981.1| succinate dehydrogenase [Sulfitobacter sp. EE-36] Length = 259 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G KNL+++++YRWNPD+ NP +DTY+VD+D CGPM+L Sbjct: 1 MVQLTLPKNSRMTTGKTWPKPEGAKNLRQFQVYRWNPDDGKNPAIDTYFVDMDTCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC + ++KGA+ +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACTYGVDEVKGAVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI+PWL+T + +PAKE QS +DR K+DGLYEC+MCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIQPWLETKTAEPAKEWKQSIDDRAKLDGLYECIMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA AIA IK M+++R + Sbjct: 241 LNPAAAIANIKKMMVERTV 259 >gi|116254175|ref|YP_770013.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium leguminosarum bv. viciae 3841] gi|241206661|ref|YP_002977757.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115258823|emb|CAK09929.1| putative succinate dehydrogenase iron-sulfur protein [Rhizobium leguminosarum bv. viciae 3841] gi|240860551|gb|ACS58218.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 259 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 198/259 (76%), Positives = 233/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G KN +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGAKNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ +YPLPH+ Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|114764867|ref|ZP_01444049.1| succinate dehydrogenase catalytic subunit [Pelagibaca bermudensis HTCC2601] gi|114542753|gb|EAU45776.1| succinate dehydrogenase catalytic subunit [Roseovarius sp. HTCC2601] Length = 259 Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK SR++ GK W P G N++ ++IYRW+PD NP +DTYY+D+D CGPMVL Sbjct: 1 MVQFTLPKNSRIRTGKTWPKPDGATNVRAFKIYRWDPDTGENPRVDTYYLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+ + +I G + VYPLPHM Sbjct: 61 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEISGDVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH SI PWL+T + +P KE QS EDR+K+DGLYECVMCA CSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASIMPWLETKTNRPEKEWKQSIEDRKKLDGLYECVMCASCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNSDRYLGPAALLHAYRWIIDSRDEATGERLDQLEDPFKLYRCHTIMNCTKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAK+IA+IK MLL+R + Sbjct: 241 LNPAKSIAEIKKMLLNRHV 259 >gi|327188892|gb|EGE56084.1| succinate dehydrogenase protein, iron-sulfur subunit [Rhizobium etli CNPAF512] Length = 259 Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 200/259 (77%), Positives = 232/259 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|307822161|ref|ZP_07652393.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacter tundripaludum SV96] gi|307736727|gb|EFO07572.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacter tundripaludum SV96] Length = 261 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 164/260 (63%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S + GK + AP G N++ + +YRW+P++ NP +D + +D+D+CGPMVL Sbjct: 1 MAEFTLPKNSVLIEGKTFKAPAGATNIRRFEVYRWDPESGENPRIDAFELDMDSCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +L IKN+ID +LT RRSCREG+CGSC M I+G N+LAC K + G I +YPLPH+ Sbjct: 61 DAILKIKNEIDSSLTFRRSCREGVCGSCAMMINGKNSLACTKAIDSYSGTIKIYPLPHLQ 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++HFY+Q+ SI+PW++T +P E LQS EDR+K+DGLY+CV+CACCSTS Sbjct: 121 VVKDLVADLTHFYAQYASIKPWIETQTPAPADSERLQSKEDREKLDGLYDCVLCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNS+RYLGPAILLQAYRWL+DSRDE GERLD LEDPF+LYRCHTIMNCT +CPK Sbjct: 181 CPSYWWNSERYLGPAILLQAYRWLVDSRDESTGERLDELEDPFKLYRCHTIMNCTDTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+ K +L+ RK+ Sbjct: 241 GLNPAKAIAETKKLLVQRKL 260 >gi|254700545|ref|ZP_05162373.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 5 str. 513] gi|261751049|ref|ZP_05994758.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 5 str. 513] gi|261740802|gb|EEY28728.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 5 str. 513] Length = 259 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 228/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQ YRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQTYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|197103679|ref|YP_002129056.1| succinate dehydrogenase, iron-sulfur protein [Phenylobacterium zucineum HLK1] gi|196477099|gb|ACG76627.1| succinate dehydrogenase, iron-sulfur protein [Phenylobacterium zucineum HLK1] Length = 260 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 167/260 (64%), Positives = 204/260 (78%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M EI LPK SRV +G+ AP G K +++YR++PD+ NP DTY VD+D CGPMVL Sbjct: 1 MAEIRLPKNSRVTQGRHHPAPAGAARTKTFKVYRYDPDDAANPRWDTYEVDVDACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L++IKN +DPTLT RRSCREG+CGSC MNI G NTLAC +++ A+ + PLPHM Sbjct: 61 DVLIHIKNTMDPTLTFRRSCREGVCGSCAMNIGGRNTLACTHGWEEVPGQAVQISPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ FY+Q+ SIEPWL T +P+P E QS EDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTLFYAQYASIEPWLHTKTPEPQTEWAQSPEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN ++YLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNQEKYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI +IK +L+DR + Sbjct: 241 GLNPAKAIGEIKKLLVDRVV 260 >gi|83944808|ref|ZP_00957174.1| succinate dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83851590|gb|EAP89445.1| succinate dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 261 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 163/261 (62%), Positives = 208/261 (79%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTG--EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM 58 MV++ LPK S+VK+GK+W P G EKNL+ +++YR++P+ NP DTYYVD CGPM Sbjct: 1 MVQLTLPKNSQVKKGKVWPKPEGADEKNLRAFKVYRYDPETGENPSWDTYYVDTSKCGPM 60 Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 +LD L +IKN+ID TL RRSCREGICGSC MNI G NT+AC + + G I + PLPH Sbjct: 61 ILDALFFIKNEIDTTLAFRRSCREGICGSCAMNIGGRNTIACTNGIDEHNGTITIAPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 V++DL+ D+++FY+Q SI+P+LKT +P+P KE QS EDR+++DGLYEC++CA CST Sbjct: 121 QPVVRDLIPDLTNFYAQLESIKPYLKTDTPEPEKEWKQSQEDREELDGLYECILCASCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD+YLGPA LLQAYRW+ DSRDE GERLD+LEDPF+LYRCHTIMNC CP Sbjct: 181 SCPSYWWNSDKYLGPAALLQAYRWIADSRDEATGERLDDLEDPFKLYRCHTIMNCANVCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGLNPAKAI KIK ++++R++ Sbjct: 241 KGLNPAKAIGKIKDLMVERQV 261 >gi|119383324|ref|YP_914380.1| succinate dehydrogenase iron-sulfur subunit [Paracoccus denitrificans PD1222] gi|2494620|sp|Q59662|DHSB_PARDE RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|975319|gb|AAA75178.1| succinate dehydrogenase iron-sulfur protein subunit [Paracoccus denitrificans] gi|119373091|gb|ABL68684.1| succinate dehydrogenase subunit B [Paracoccus denitrificans PD1222] Length = 259 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 177/257 (68%), Positives = 211/257 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR++ GK W P G N++ + IYRW+PD NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSRMRVGKTWPKPEGATNVRRFNIYRWDPDTGENPRIDTYFVDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG N LAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGMDEIKGDVNIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++HFY+QH S++P+L T +P P KE QS EDR+K+DGLYECVMCA CST+C Sbjct: 121 VVKDLVPDLTHFYAQHASVQPYLITETPTPDKEWRQSIEDRKKLDGLYECVMCASCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDSLEDPFKLYRCHTIMNCTNTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDR 257 LNPAKAIA IK M++DR Sbjct: 241 LNPAKAIASIKHMMVDR 257 >gi|225628101|ref|ZP_03786136.1| aspartate kinase [Brucella ceti str. Cudo] gi|260169329|ref|ZP_05756140.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. F5/99] gi|261758844|ref|ZP_06002553.1| succinate dehydrogenase catalytic subunit [Brucella sp. F5/99] gi|225616926|gb|EEH13973.1| aspartate kinase [Brucella ceti str. Cudo] gi|261738828|gb|EEY26824.1| succinate dehydrogenase catalytic subunit [Brucella sp. F5/99] Length = 259 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 201/259 (77%), Positives = 228/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNID NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDDANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|77464559|ref|YP_354063.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides 2.4.1] gi|126463399|ref|YP_001044513.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides ATCC 17029] gi|221640470|ref|YP_002526732.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides KD131] gi|332559452|ref|ZP_08413774.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides WS8N] gi|77388977|gb|ABA80162.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides 2.4.1] gi|126105063|gb|ABN77741.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides ATCC 17029] gi|221161251|gb|ACM02231.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides KD131] gi|332277164|gb|EGJ22479.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides WS8N] Length = 259 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 213/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+V+ GK W P KN++++ IYRW+PD NP +DTY++D+D CGPMVL Sbjct: 1 MVQLTLPKNSKVRTGKTWPKPADAKNVRKFMIYRWDPDTGENPRVDTYFLDMDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D+S FY+QH SI PWL+T + +PAKE QS EDR K+DGLYECVMCACCSTSC Sbjct: 121 VIKDLIPDLSLFYAQHASIMPWLETKTVEPAKEWRQSVEDRAKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW++DSRDE ERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIVDSRDEATPERLDMLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R I Sbjct: 241 LNPAKAIAEIKKMMVERVI 259 >gi|163734146|ref|ZP_02141587.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter litoralis Och 149] gi|161392682|gb|EDQ17010.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter litoralis Och 149] Length = 259 Score = 310 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 217/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ +GK W P G +L+++ IYRWNPD+ NP +DTY+VD+D CGPM+L Sbjct: 1 MVQLSLPKNSRMTKGKTWPKPEGATDLRKFSIYRWNPDDGQNPRLDTYFVDMDTCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M ++KG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH S PWL+T + +PAKE QS +DR+K+DGLYECVMCACCSTSC Sbjct: 121 VVKDLIPDLTHFYAQHASTMPWLETKTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA+AIA IK M+++R++ Sbjct: 241 LNPAEAIANIKKMMVERRV 259 >gi|114571383|ref|YP_758063.1| succinate dehydrogenase iron-sulfur subunit [Maricaulis maris MCS10] gi|114341845|gb|ABI67125.1| succinate dehydrogenase subunit B [Maricaulis maris MCS10] Length = 259 Score = 310 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 155/257 (60%), Positives = 197/257 (76%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S K+GK P G N + +++YR+NP+ P DTY VD+D+CGPMVL Sbjct: 1 MVQLTLPKGSAPKKGKTHPKPDGATNTRTFKVYRYNPETDETPSWDTYKVDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKN +D +L RRSCREG+CGSC MNI G NT+AC + + KG I + PLPH Sbjct: 61 DALLWIKNNVDASLAFRRSCREGVCGSCSMNIGGRNTIACTSGIDEYKGDITISPLPHQP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V++DL+ D++ FY+QH +++P+LKT +P P KE QS E R+K+DGLYEC+MCA CST+C Sbjct: 121 VVRDLIPDLTQFYAQHAAVKPYLKTDTPAPEKEWKQSPEQREKLDGLYECIMCASCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+Y+GPA LLQAYRWL DSRDE GERLD L DPF+LYRCHTIMNC Q CPKG Sbjct: 181 PSYWWNGDKYMGPAALLQAYRWLADSRDEATGERLDELNDPFKLYRCHTIMNCAQVCPKG 240 Query: 241 LNPAKAIAKIKMMLLDR 257 LNPA+AI +IK M+++R Sbjct: 241 LNPAEAIGEIKQMMVER 257 >gi|312114354|ref|YP_004011950.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodomicrobium vannielii ATCC 17100] gi|311219483|gb|ADP70851.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodomicrobium vannielii ATCC 17100] Length = 260 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 211/260 (81%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAP-TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV++ LPK S++++GK WN+P K+ K + +YRW+P NP MDTY+V+L CGPMV Sbjct: 1 MVQLTLPKNSKIRKGKTWNSPGANAKDWKRFEVYRWDPTTGHNPSMDTYWVNLKECGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD ++ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K +K+I + +YPLPHM Sbjct: 61 LDAIIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKPIKEISSTVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 SV KDL+ D+SHF++QHRSIEPWL+T SP P E LQS +DR +DGLYEC++CACC+TS Sbjct: 121 SVSKDLIPDLSHFFAQHRSIEPWLQTDSPPPETEWLQSRDDRAVLDGLYECILCACCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN R+LGPA LLQA RW+ DSRDE GERLDNLEDPFRLYRCHTI+NC Q CPK Sbjct: 181 CPSYWWNGARFLGPASLLQARRWIADSRDERTGERLDNLEDPFRLYRCHTILNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP +AIA++K ++++R++ Sbjct: 241 GLNPGEAIAELKKLMVERQL 260 >gi|148554225|ref|YP_001261807.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas wittichii RW1] gi|148499415|gb|ABQ67669.1| succinate dehydrogenase subunit B [Sphingomonas wittichii RW1] Length = 261 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 167/261 (63%), Positives = 208/261 (79%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M E LPK S++K+ GK+ A K++K ++IYR++PD+ NP DT+ VDL CGPMV Sbjct: 1 MAEFALPKNSKIKKNGKVHKAAPDAKDVKSFKIYRYDPDSGENPRYDTFEVDLAECGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ DP++T RRSCREGICGSC MN++G N LAC ++D KG + + PLPHM Sbjct: 61 LDALIKIKSEQDPSVTFRRSCREGICGSCSMNMNGKNGLACTTAIEDCKGEVRITPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D +HFY+Q+ SI+PWLKTV+P KE LQS +DR K+DGLYEC++CACCST Sbjct: 121 DVIKDLVPDFTHFYAQYASIQPWLKTVTPAPSGKERLQSPDDRNKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC CP Sbjct: 181 SCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PAKAI +IK M+++R++ Sbjct: 241 KGLSPAKAIGEIKKMVVERQL 261 >gi|217979666|ref|YP_002363813.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocella silvestris BL2] gi|217505042|gb|ACK52451.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocella silvestris BL2] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 185/259 (71%), Positives = 216/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK SR GK W P E+ IYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVEFALPKNSRPVSGKSWPRPGAATRTTEFNIYRWSPDDGANPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +++IK+KIDPTLT RRSCREGICGSC MNIDG NTLAC K + DIKGA+ +YPLPHMS Sbjct: 61 DAIIWIKSKIDPTLTFRRSCREGICGSCAMNIDGANTLACTKAIDDIKGAVKIYPLPHMS 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QH SIEPWL+T SP P KE Q+ EDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHASIEPWLQTKSPTPEKEWRQAPEDRAKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDN+EDPFRLYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNVEDPFRLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIAKIK M+++R++ Sbjct: 241 LNPAKAIAKIKNMMIERQL 259 >gi|114706938|ref|ZP_01439837.1| succinate dehydrogenase catalytic subunit [Fulvimarina pelagi HTCC2506] gi|114537488|gb|EAU40613.1| succinate dehydrogenase catalytic subunit [Fulvimarina pelagi HTCC2506] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 186/259 (71%), Positives = 223/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S + G+ W+ P G N++E+RIYRW+PD+ NP +DTYYVDLD+CGPMVL Sbjct: 1 MVELALPKNSTINEGRTWDRPKGANNIREFRIYRWSPDDDENPRLDTYYVDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKN +D TLTLRRSCREGICGSC MNIDG+NTLAC K M +I G++AVYPLPHM Sbjct: 61 DALLWIKNNVDSTLTLRRSCREGICGSCAMNIDGSNTLACTKGMDEIDGSVAVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ Y+Q RSIEPWLKT +P+P KE QSHEDR+K+DGLYEC++C CC TSC Sbjct: 121 VVKDLVPDLTVPYAQLRSIEPWLKTETPEPQKEWKQSHEDREKLDGLYECILCFCCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN +RYLGPA+LLQAYRWLIDSRDE +GERLD LEDPF+LYRCHTIMNCTQSCPKG Sbjct: 181 PSYWWNGERYLGPAVLLQAYRWLIDSRDEAKGERLDALEDPFKLYRCHTIMNCTQSCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|254448793|ref|ZP_05062250.1| succinate dehydrogenase iron-sulfur protein [gamma proteobacterium HTCC5015] gi|198261634|gb|EDY85922.1| succinate dehydrogenase iron-sulfur protein [gamma proteobacterium HTCC5015] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 176/258 (68%), Positives = 216/258 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LP S + +GK+W AP G KN K++ IYR++PD+ NP DTY VDLD CGPMVL Sbjct: 1 MAQFKLPANSIMTKGKVWKAPEGAKNTKKFEIYRFDPDSGKNPRTDTYEVDLDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL IKN++DPTLTLRRSCREGICGSC MNIDGTNTLAC K ++D+KG + +YPLPHM Sbjct: 61 DALLKIKNEMDPTLTLRRSCREGICGSCAMNIDGTNTLACTKAIEDVKGTVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+Q RS++P+LKT S P +E LQ+ DR ++DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQLRSVDPFLKTKSQAPTRERLQTEADRAQLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+L+QAYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAVLMQAYRWIIDSRDEATGERLDALEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPA+AIA+IK ML++RK Sbjct: 241 LNPARAIAEIKKMLMERK 258 >gi|310814652|ref|YP_003962616.1| succinate dehydrogenase [Ketogulonicigenium vulgare Y25] gi|308753387|gb|ADO41316.1| succinate dehydrogenase [Ketogulonicigenium vulgare Y25] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 178/257 (69%), Positives = 213/257 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G KN+++ +IYRW+PD+ NP +DTY+VDLD CGPMVL Sbjct: 1 MVQLTLPKNSRMTVGKTWPKPAGAKNVRKVQIYRWSPDDGANPRLDTYFVDLDQCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ + +I+G I +YPLPHM Sbjct: 61 DVLIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACIYGLDEIRGDIRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLV D++HFY+QH SI PWL+T + P KE QS EDR+K+DGLYECVMCA CST+C Sbjct: 121 VIKDLVPDLTHFYAQHASIMPWLETKTNTPQKEWRQSIEDRKKLDGLYECVMCASCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNSDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDR 257 LNPA+AI+ IK M+++R Sbjct: 241 LNPAEAISHIKKMMVER 257 >gi|209551260|ref|YP_002283177.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537016|gb|ACI56951.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 259 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 195/259 (75%), Positives = 230/259 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +D +Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDIFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DI GA+ +YPLPH+ Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|298293271|ref|YP_003695210.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Starkeya novella DSM 506] gi|296929782|gb|ADH90591.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Starkeya novella DSM 506] Length = 260 Score = 309 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 183/259 (70%), Positives = 218/259 (84%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S++ GK+W PTG L EY+IYRWNPD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVQLTLPKNSQITEGKVWPKPTGANRLTEYKIYRWNPDDGKNPSVDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKNK+DPTLT RRSCREGICGSC MNIDGTNTLAC+K M D+ + + +YPLPHM Sbjct: 61 DGLIWIKNKVDPTLTFRRSCREGICGSCAMNIDGTNTLACLKSMDDVDASAVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DM+ FY+QH SIEPWL T +P P KE Q+ DR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDMTQFYAQHASIEPWLHTETPAPEKEWRQARGDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA LLQAYRWLIDSRDE G+RLD+LEDPFRLYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNGDRYLGPAALLQAYRWLIDSRDEATGDRLDDLEDPFRLYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPAKAIA+IK +++ R+ Sbjct: 241 GLNPAKAIAEIKKLMVARQ 259 >gi|254562945|ref|YP_003070040.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium extorquens DM4] gi|254270223|emb|CAX26217.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium extorquens DM4] Length = 274 Score = 309 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 172/274 (62%), Positives = 209/274 (76%), Gaps = 15/274 (5%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S+V G+ W AP G KNL+ +RIYRWNPD+ NP +DTY VD D+CGPMVL Sbjct: 1 MAQFNLPKNSQVTEGRTWPAPDGAKNLQTFRIYRWNPDDGKNPRIDTYRVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA---------- 110 D LL+IKNK+DPTL RRSCREGICGSC MNI+G N LAC + + K Sbjct: 61 DALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRK 120 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 + +YPLPHM V+KDLV D+++FY+QH SIEPWL+T +P P KE Q+ EDR ++D Sbjct: 121 DKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETPAPEKEWKQTPEDRARLD 180 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 GLYEC++CACC+TSCPSYWWN D++LGPA LLQAYRWLIDSRDE GERLD L DPFRLY Sbjct: 181 GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLY 240 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RCHTIMNC +CPK LNPAKAIA+IK M+++R++ Sbjct: 241 RCHTIMNCANTCPKNLNPAKAIAEIKKMMVEREV 274 >gi|158425370|ref|YP_001526662.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Azorhizobium caulinodans ORS 571] gi|158332259|dbj|BAF89744.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Azorhizobium caulinodans ORS 571] Length = 261 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 181/261 (69%), Positives = 213/261 (81%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK W P K + E+R+YRWNPD+ NP +DTYYVD + CGPMVL Sbjct: 1 MAEFTLPKNSQITKGKTWPKPQAAKKVTEFRVYRWNPDDGKNPSIDTYYVDREACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPH 118 DGL+YIKN IDPTLT RRSCREG+CGSC MNI GTNTLAC K M ++ KG++ +YPLPH Sbjct: 61 DGLIYIKNHIDPTLTFRRSCREGVCGSCAMNIGGTNTLACTKGMDEVLVKGSVNIYPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M V+KDLV D++ FY+QH SIEPWL+T S P KE QS EDR+++DGLYEC++CACCST Sbjct: 121 MEVVKDLVPDLTRFYAQHASIEPWLQTDSAAPEKEWRQSKEDRERLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPA LLQA RWL DSRDE G RLDNLEDPFRLYRCHTIMNC Q+CP Sbjct: 181 SCPSYWWNGDRYLGPAALLQANRWLKDSRDERTGARLDNLEDPFRLYRCHTIMNCAQACP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGLNPAKAIA+IK M+++R+I Sbjct: 241 KGLNPAKAIAEIKKMMVERQI 261 >gi|163761418|ref|ZP_02168492.1| succinate dehydrogenase subunit B, iron-sulfur protein [Hoeflea phototrophica DFL-43] gi|162281413|gb|EDQ31710.1| succinate dehydrogenase subunit B, iron-sulfur protein [Hoeflea phototrophica DFL-43] Length = 259 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 191/259 (73%), Positives = 227/259 (87%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+ K GK+W P G + +E++IYRW+PD+ NP +DT+++D D+CGPMVL Sbjct: 1 MVELTLPKNSQPKPGKVWPKPEGATHTREFKIYRWSPDDAENPRIDTFHIDTDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKNKID TLTLRRSCREGICGSC MNIDGTNTLAC K + +I GA+ VYPLPH+ Sbjct: 61 DGLLWIKNKIDATLTLRRSCREGICGSCAMNIDGTNTLACTKGLDEIDGAVKVYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRAKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLD+LEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDESTGERLDDLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R++ Sbjct: 241 LNPAKAIAEIKKMMVERRV 259 >gi|84684216|ref|ZP_01012118.1| succinate dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84667969|gb|EAQ14437.1| succinate dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 259 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 178/259 (68%), Positives = 212/259 (81%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK SR++ GK W P G KN++++ IYRW PD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVEFALPKNSRIRTGKTWPKPEGAKNVRKFLIYRWTPDDGQNPRVDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG N LAC+ + +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGLDEIKGDVKIYPLPHMD 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V++DLV D++HFY+QH SI PWL+T + PAKE QS EDR+K+DGLYECVMCA CS SC Sbjct: 121 VVRDLVPDLTHFYAQHASIMPWLETKTNAPAKEWRQSIEDRKKLDGLYECVMCASCSASC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNS+RYLGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNSERYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++ R I Sbjct: 241 LNPAKAIAEIKKKMVQRTI 259 >gi|114320491|ref|YP_742174.1| succinate dehydrogenase iron-sulfur subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114226885|gb|ABI56684.1| succinate dehydrogenase subunit B [Alkalilimnicola ehrlichii MLHE-1] Length = 258 Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 179/259 (69%), Positives = 216/259 (83%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LP S V GK W A +G N+++++IYRW+PD NP +DTY VDLDNCGPMVL Sbjct: 1 MAEFKLPANSVVGEGKTWKAESG-GNVRQFKIYRWDPDAGQNPRLDTYEVDLDNCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++DPTLT RRSCREGICGSC MNIDGTNTLAC K + +++G + +YPLPHMS Sbjct: 60 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIDEVRGDVKIYPLPHMS 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DM+HFY+Q+ SI+PW++T +P P +E LQS EDR K+DGLYEC++CACCSTS Sbjct: 120 VVKDLVPDMTHFYAQYASIKPWMRTQTPAPPDQERLQSKEDRAKLDGLYECILCACCSTS 179 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDRYLGPAILLQAYRW++DSRDE GERLD LEDPF+LYRCHTIMNC ++CPK Sbjct: 180 CPSYWWNSDRYLGPAILLQAYRWIVDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPK 239 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNP KAIA+IK ML+ R+ Sbjct: 240 GLNPGKAIAEIKKMLVMRR 258 >gi|84515888|ref|ZP_01003249.1| succinate dehydrogenase [Loktanella vestfoldensis SKA53] gi|84510330|gb|EAQ06786.1| succinate dehydrogenase [Loktanella vestfoldensis SKA53] Length = 259 Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats. Identities = 180/259 (69%), Positives = 215/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G NL++ ++YRWNP++ NP +DTY+VD+D+CGPMVL Sbjct: 1 MVQLTLPKNSRMTTGKTWPKPAGATNLRKVQVYRWNPEDGKNPQLDTYFVDMDSCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG I +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D++HFY+QH SI PWL+T S PAKE QS +DR+K+DGLYECVMCACCSTSC Sbjct: 121 VIKDLIPDLTHFYAQHASIMPWLETKSNTPAKEWKQSVDDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW++DSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIVDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK M+++R + Sbjct: 241 LNPAKAIASIKGMMVERVV 259 >gi|163853010|ref|YP_001641053.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium extorquens PA1] gi|218531820|ref|YP_002422636.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium chloromethanicum CM4] gi|240140351|ref|YP_002964830.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium extorquens AM1] gi|27902659|gb|AAO24622.1| succinate dehydrogenase beta subunit [Methylobacterium extorquens] gi|163664615|gb|ABY31982.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium extorquens PA1] gi|218524123|gb|ACK84708.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium chloromethanicum CM4] gi|240010327|gb|ACS41553.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium extorquens AM1] Length = 274 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 171/274 (62%), Positives = 209/274 (76%), Gaps = 15/274 (5%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S+V G+ W AP G +NL+ +RIYRWNPD+ NP +DTY VD D+CGPMVL Sbjct: 1 MAQFNLPKNSQVTEGRTWPAPDGARNLQTFRIYRWNPDDGKNPRIDTYRVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA---------- 110 D LL+IKNK+DPTL RRSCREGICGSC MNI+G N LAC + + K Sbjct: 61 DALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRK 120 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 + +YPLPHM V+KDLV D+++FY+QH SIEPWL+T +P P KE Q+ EDR ++D Sbjct: 121 DKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETPAPEKEWKQTPEDRARLD 180 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 GLYEC++CACC+TSCPSYWWN D++LGPA LLQAYRWLIDSRDE GERLD L DPFRLY Sbjct: 181 GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLY 240 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RCHTIMNC +CPK LNPAKAIA+IK M+++R++ Sbjct: 241 RCHTIMNCANTCPKNLNPAKAIAEIKKMMVEREV 274 >gi|89053295|ref|YP_508746.1| succinate dehydrogenase iron-sulfur subunit [Jannaschia sp. CCS1] gi|88862844|gb|ABD53721.1| succinate dehydrogenase subunit B [Jannaschia sp. CCS1] Length = 264 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 181/262 (69%), Positives = 216/262 (82%), Gaps = 5/262 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR+ RGK W P G NL++++IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVELALPKNSRITRGKTWPKPDGATNLRKFQIYRWNPDDGKNPSLDTYWVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGT-----NTLACVKDMKDIKGAIAVYP 115 D L+ IKN+IDPTLT RRSCREGICGSC MNI G NTLAC+ M +++G IA+YP Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGVKSKGTNTLACIYGMDEVQGDIAIYP 120 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LPHM V+KDL+ D++HFY+QH SI PWL+T + +P KE QS EDR+K+DGLYECVMCAC Sbjct: 121 LPHMPVVKDLIPDLTHFYAQHASIMPWLETKTRRPEKEWRQSVEDREKLDGLYECVMCAC 180 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 CSTSCPSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNCT+ Sbjct: 181 CSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDENTGERLDELEDPFKLYRCHTIMNCTK 240 Query: 236 SCPKGLNPAKAIAKIKMMLLDR 257 +CPKGLNPAKAI+ IK M+++R Sbjct: 241 TCPKGLNPAKAISSIKKMMVER 262 >gi|296283814|ref|ZP_06861812.1| succinate dehydrogenase iron-sulfur subunit [Citromicrobium bathyomarinum JL354] Length = 261 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 166/261 (63%), Positives = 206/261 (78%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M LPK S+++ +G++ A G +K+++IYR+NPD+ NP D + VDLD CGPMV Sbjct: 1 MATFTLPKNSKIRDKGEVHRAAEGAGRVKKFKIYRYNPDSGSNPHYDRFEVDLDACGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L IKN+IDPTLT RRSCREGICGSC MNI+G+N LAC ++D+KG I + PLPHM Sbjct: 61 LDALFKIKNEIDPTLTFRRSCREGICGSCAMNINGSNALACTTAIEDLKGDIRITPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 V+KDLV D +HFY+Q+ SI PWL+TV+P +E LQS E R+++DGLYEC++CACCST Sbjct: 121 EVVKDLVPDFTHFYAQYASIRPWLQTVTPTPSGEERLQSPEQREQLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDP+RLYRCHTIMNC CP Sbjct: 181 ACPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDALEDPYRLYRCHTIMNCANVCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PAKAIA+ K M+ +R I Sbjct: 241 KGLSPAKAIAETKKMMAERAI 261 >gi|90421158|ref|ZP_01229060.1| succinate dehydrogenase iron-sulfur protein [Aurantimonas manganoxydans SI85-9A1] gi|90334650|gb|EAS48430.1| succinate dehydrogenase iron-sulfur protein [Aurantimonas manganoxydans SI85-9A1] Length = 259 Score = 307 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 184/259 (71%), Positives = 224/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S + GK+W+ P G N++E++IYRW+PD++ NP DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSTINPGKVWDKPAGATNVREFKIYRWSPDDEENPRTDTYYVDTDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL+IKNK+D TL+LRRSCREGICGSC MNIDG+NTLAC K M +I+GA+ VYPLPHM Sbjct: 61 DALLWIKNKVDSTLSLRRSCREGICGSCAMNIDGSNTLACTKGMDEIRGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D++ Y+Q RSIEPWLKT +P+P +E QSHEDR+K+DGLYEC++C CC TSC Sbjct: 121 VIKDLIPDLTVPYTQLRSIEPWLKTDTPEPEREWRQSHEDREKLDGLYECILCFCCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLD+LEDPF+LYRCHTIMNCTQSCPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDDLEDPFKLYRCHTIMNCTQSCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+I+ M+++R++ Sbjct: 241 LNPAKAIAEIRKMMIERRV 259 >gi|220926982|ref|YP_002502284.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium nodulans ORS 2060] gi|219951589|gb|ACL61981.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium nodulans ORS 2060] Length = 260 Score = 307 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 177/260 (68%), Positives = 209/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S+ GK W P G KNL+E+RIYRWN D+ NP +DTYYVD D+CGPMVL Sbjct: 1 MAQFTLPKNSQYTEGKTWPKPAGAKNLQEFRIYRWNQDDGANPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 D LL+IKNK+DPTLT RRSCREGICGSC MNI G NTLAC + D K + I +YPLPHM Sbjct: 61 DALLWIKNKVDPTLTFRRSCREGICGSCAMNIMGQNTLACTLGIDDCKSSQIKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S F++QH +IEPWL+T +P P KE Q+ EDR ++DGLYEC++CACC+TS Sbjct: 121 PVLKDLVPDLSSFFAQHAAIEPWLQTETPAPEKEWRQTPEDRARLDGLYECILCACCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DR+LGPA LLQAYRWLIDSRDE GERLD L DPFRLYRCHTIMNC +CPK Sbjct: 181 CPSYWWNGDRFLGPAALLQAYRWLIDSRDEHTGERLDILHDPFRLYRCHTIMNCANTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M++ R++ Sbjct: 241 GLNPAKAIAEIKKMMVAREV 260 >gi|126725049|ref|ZP_01740892.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacterales bacterium HTCC2150] gi|126706213|gb|EBA05303.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacterales bacterium HTCC2150] Length = 259 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 173/259 (66%), Positives = 212/259 (81%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ +GK+W G N ++++IYRW + NP +DTY+VD+D CGPMVL Sbjct: 1 MVEFTLPKNSKITKGKVWPKAEGATNFRKFQIYRWQEEGGKNPSLDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTL+ RRSCREGICGSC MNIDG NTLAC+ M DIKG + +YPLPH+ Sbjct: 61 DALIKIKNEIDPTLSFRRSCREGICGSCAMNIDGINTLACIYGMDDIKGDVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V++DL+ D++HFY+QH SI PWL+T + +PAKE QS +DR K+DGLYECVMCACCSTSC Sbjct: 121 VVRDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIDDRGKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R + Sbjct: 241 LNPAKAIAEIKKMMVERVV 259 >gi|254781044|ref|YP_003065457.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254040721|gb|ACT57517.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 259 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL Sbjct: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC Sbjct: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG Sbjct: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIAKIKMMLLDRKI Sbjct: 241 LNPAKAIAKIKMMLLDRKI 259 >gi|326404270|ref|YP_004284352.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium multivorum AIU301] gi|325051132|dbj|BAJ81470.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium multivorum AIU301] Length = 260 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 165/259 (63%), Positives = 207/259 (79%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LPK SRV +GK + A G +K +++YRWNPD NP DTY +DLD CGPMVL Sbjct: 1 MAELTLPKNSRVTQGKTYKAEPGATRVKSFKVYRWNPDEDANPRADTYEIDLDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC+K ++++K A+ + PLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH-EDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ Y+Q+RSIEPWL+ +P P + E+R ++DGL+EC++C CC+TS Sbjct: 121 VVKDLVPDLNQAYAQYRSIEPWLQAETPPPPDGERKQSVEERAELDGLWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+L+ AYRW+ DSRDE G+RLD LEDPF+LYRCHTIMNCTQ+CPK Sbjct: 181 CPSYWWNGDRYLGPAVLMAAYRWIADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPAKAI KIK M+++R+ Sbjct: 241 GLNPAKAIGKIKQMMVERQ 259 >gi|27375626|ref|NP_767155.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] gi|3169725|gb|AAC17943.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium japonicum] gi|27348763|dbj|BAC45780.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 176/260 (67%), Positives = 217/260 (83%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G +++E+R+YRWNPD+ NP +DTYYVD ++CGPMVL Sbjct: 1 MVEFALPKNSKITGGKTWPKPAGATDVREFRVYRWNPDDGKNPSVDTYYVDTNDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDP+LT RRSCREG+CGSC MNIDG NTLAC + M D+K + + PLPH Sbjct: 61 DGLIWIKNNIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ S+EPWLKT SP P KE QSHEDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASVEPWLKTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDRYLGPA LLQA RW+ DSRDE GERLDNLEDPFRLYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRYLGPAALLQANRWVSDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPA+AIA++K+ +++R+I Sbjct: 241 GLNPAEAIAELKLKMVERQI 260 >gi|294012423|ref|YP_003545883.1| succinate dehydrogenase iron-sulfur protein [Sphingobium japonicum UT26S] gi|292675753|dbj|BAI97271.1| succinate dehydrogenase iron-sulfur protein [Sphingobium japonicum UT26S] Length = 262 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 169/262 (64%), Positives = 207/262 (79%), Gaps = 3/262 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M E LPK S++ +G AP G N+K +++YR++PD+ NP DT+ +DLDNCGPMV Sbjct: 1 MAEFSLPKNSKISAKGATHKAPDGATNVKSFKVYRYDPDSGQNPRYDTFEIDLDNCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPH 118 LD LL IKN+ DPTLT RRSCREGICGSC MN++G N LAC +++ + V PLPH Sbjct: 61 LDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGRNGLACTTSIEECAGKEVRVTPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCS 177 M VIKDLV D +HFY+Q+ SI+PWL+TVSP KE LQS DR+K+DGLYEC++CACCS Sbjct: 121 MDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGLYECILCACCS 180 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 TSCPSYWWNSD++LGPAILLQAYRWL DSRDE+ GERLD LEDPFRLYRCHTIMNC C Sbjct: 181 TSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRCHTIMNCANVC 240 Query: 238 PKGLNPAKAIAKIKMMLLDRKI 259 PKGL+PAKAIA+ K M+++R++ Sbjct: 241 PKGLSPAKAIAETKKMMVERQL 262 >gi|304394284|ref|ZP_07376207.1| succinate dehydrogenase iron-sulfur subunit [Ahrensia sp. R2A130] gi|303293724|gb|EFL88101.1| succinate dehydrogenase iron-sulfur subunit [Ahrensia sp. R2A130] Length = 261 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 182/261 (69%), Positives = 223/261 (85%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNL--KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM 58 MVE++LPK S+++ GK+W ++ +E++IYRW+PD+ NP +DTY V+ D+CGPM Sbjct: 1 MVELVLPKNSKIEDGKVWTQIASDQKAPGREFKIYRWSPDDDRNPRVDTYTVNTDDCGPM 60 Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 VLD LL+IK +DPTLT RRSCREGICGSC MNIDGTNTLAC K M ++ GA+ +YPLPH Sbjct: 61 VLDALLWIKANVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMAEVSGAVKIYPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M V+KDLV D+++FY+QHRSIEP+LKTV+PKP KE QS EDR+K+DGLYEC++CACCST Sbjct: 121 MPVVKDLVPDLTNFYAQHRSIEPYLKTVTPKPEKEWKQSPEDREKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPA LLQAYRWLIDSRDE G+RLDNLEDPFRLYRCHTIMNC Q+CP Sbjct: 181 SCPSYWWNGDRYLGPATLLQAYRWLIDSRDEATGDRLDNLEDPFRLYRCHTIMNCAQACP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGLNPAKAIA+IK M+++R++ Sbjct: 241 KGLNPAKAIAEIKKMMVERRV 261 >gi|148260876|ref|YP_001235003.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium cryptum JF-5] gi|146402557|gb|ABQ31084.1| succinate dehydrogenase subunit B [Acidiphilium cryptum JF-5] Length = 260 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 168/259 (64%), Positives = 209/259 (80%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LPK SRV +GK + A G +K +++YRWNPD NP DTY +DLD CGPMVL Sbjct: 1 MAELTLPKNSRVTQGKTYKAEPGATRVKSFKVYRWNPDEDANPRADTYEIDLDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC+K ++++K A+ + PLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ Y+Q+RSIEPWL+ + P P E QS E+R ++DGL+EC++C CC+TS Sbjct: 121 VVKDLVPDLNQAYAQYRSIEPWLQAETAPPPDGERKQSVEERAELDGLWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+L+ AYRW+ DSRDE G+RLD LEDPF+LYRCHTIMNCTQ+CPK Sbjct: 181 CPSYWWNGDRYLGPAVLMAAYRWIADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPAKAI KIK M+++R+ Sbjct: 241 GLNPAKAIGKIKQMMVERQ 259 >gi|319409390|emb|CBI83034.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella schoenbuchensis R1] Length = 259 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 192/259 (74%), Positives = 220/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK SRVK GKIW P G L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIRLPKNSRVKAGKIWPKPEGATQLTEFHIYRWSPDDEDNPRLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTL LRRSCREGICGSC MNIDG NTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLALRRSCREGICGSCAMNIDGVNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ FY+QHR+IEPWL+TVSP+PAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKRFYAQHRAIEPWLQTVSPEPAKEWLQSYSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIADSRDEMSGERLDNLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|94496919|ref|ZP_01303493.1| succinate dehydrogenase iron-sulfur protein [Sphingomonas sp. SKA58] gi|94423595|gb|EAT08622.1| succinate dehydrogenase iron-sulfur protein [Sphingomonas sp. SKA58] Length = 262 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 169/262 (64%), Positives = 208/262 (79%), Gaps = 3/262 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M E LPK S++ +G AP G N++ +++YR++PD+ NP DT+ VDLD CGPMV Sbjct: 1 MAEFALPKNSKINGKGVTHKAPEGATNVRSFKVYRYDPDSGQNPRYDTFEVDLDQCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPH 118 LD LL IKN+ DPTLT RRSCREGICGSC MN++G N LAC + + G + + PLPH Sbjct: 61 LDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIDECAGKQVQITPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCS 177 M VIKDLV D +HFY+Q+ SI+PWL+TVSP P+ KE LQS DR+K+DGLYEC++CACCS Sbjct: 121 MDVIKDLVPDFTHFYAQYNSIKPWLQTVSPPPSGKERLQSPADREKLDGLYECILCACCS 180 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 TSCPSYWWNSD++LGPAILLQAYRWL DSRDE+ GERLD LEDPFRLYRCHTIMNC C Sbjct: 181 TSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRCHTIMNCANVC 240 Query: 238 PKGLNPAKAIAKIKMMLLDRKI 259 PKGL+PAKAIA+ K M+++R++ Sbjct: 241 PKGLSPAKAIAETKKMMVERQL 262 >gi|144898840|emb|CAM75704.1| succinate dehydrogenase iron-sulfur protein [Magnetospirillum gryphiswaldense MSR-1] Length = 260 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 171/260 (65%), Positives = 206/260 (79%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP SRV+ GK AP G K +K ++IYR++PD+ NP +DTY +DLD CGPMVL Sbjct: 1 MVEFALPANSRVQNGKTHKAPAGAKKVKAFKIYRYDPDSGANPRLDTYEIDLDACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL IKN+ID TLT RRSCREGICGSC MNIDG NTLAC+K ++DIKG +YPLPHM Sbjct: 61 DALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGANTLACLKPIEDIKGDAKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDL+ D++ Y+Q SI+PW++T +P P E LQS E+R+K+DG++EC++C CC TS Sbjct: 121 VIKDLIPDLTVPYAQLASIKPWMQTQTPPPPDGERLQSPEEREKLDGMWECILCFCCQTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+LLQA RW+ DSRDE GERLD LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDRYLGPAVLLQAARWIHDSRDEMTGERLDALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI IK LL R + Sbjct: 241 GLNPAKAIGSIKTKLLQRGV 260 >gi|126734844|ref|ZP_01750590.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. CCS2] gi|126715399|gb|EBA12264.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. CCS2] Length = 259 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 177/259 (68%), Positives = 215/259 (83%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G NL++ ++YRWNPD+ P +DTY++D+D+CGPMVL Sbjct: 1 MVQLTLPKNSRMTVGKTWPKPEGATNLRKVQVYRWNPDDGKTPQLDTYFIDMDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D++HFY+QH S+ PWL+T + +PAKE QS +DR+K+DGLYECVMCACCSTSC Sbjct: 121 VIKDLIPDLTHFYAQHASVMPWLETKTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW+IDSRDE GERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA IK M+++R + Sbjct: 241 LNPAKAIAHIKGMMVERVV 259 >gi|163869245|ref|YP_001610501.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tribocorum CIP 105476] gi|32328602|emb|CAD42865.1| putative succinate dehydrogenase iron-sulfur protein subunit B [Bartonella tribocorum] gi|161018948|emb|CAK02506.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella tribocorum CIP 105476] Length = 259 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 191/259 (73%), Positives = 221/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G L E+ +YRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIKLPKNSQVKPGKVWPKPEGATKLTEFHVYRWSPDDEENPHLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLT RRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ FY+QHR IEPWL+TVSP+PAKE LQSH DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLNRFYAQHRVIEPWLQTVSPEPAKEWLQSHSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|307293440|ref|ZP_07573286.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sphingobium chlorophenolicum L-1] gi|306881506|gb|EFN12722.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sphingobium chlorophenolicum L-1] Length = 262 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 169/262 (64%), Positives = 207/262 (79%), Gaps = 3/262 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M E LPK S++ +G AP G N+K +++YR++PD+ NP DT+ +DLDNCGPMV Sbjct: 1 MAEFALPKNSKISAKGVTHKAPDGATNVKSFKVYRYDPDSGQNPRYDTFEIDLDNCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPH 118 LD LL IKN+ DPTLT RRSCREGICGSC MN++G N LAC +++ + V PLPH Sbjct: 61 LDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGRNGLACTTSIEECAGKEVRVTPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCS 177 M VIKDLV D +HFY+Q+ SI+PWL+TVSP KE LQS DR+K+DGLYEC++CACCS Sbjct: 121 MDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGLYECILCACCS 180 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 TSCPSYWWNSD++LGPAILLQAYRWL DSRDE+ GERLD LEDPFRLYRCHTIMNC C Sbjct: 181 TSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRCHTIMNCANVC 240 Query: 238 PKGLNPAKAIAKIKMMLLDRKI 259 PKGL+PAKAIA+ K M+++R++ Sbjct: 241 PKGLSPAKAIAETKKMMVERQL 262 >gi|146337400|ref|YP_001202448.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp. ORS278] gi|146190206|emb|CAL74198.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS278] Length = 260 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 173/260 (66%), Positives = 216/260 (83%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ GK W P G ++E+++YRWNPD+ NP +DTYYVD+++CGPMVL Sbjct: 1 MAEFALPKNSQITGGKTWPKPAGATEVREFKVYRWNPDDGKNPSVDTYYVDVNDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDP+LT RRSCREG+CGSC MNIDG NTLAC + M D+K + + PLPH Sbjct: 61 DGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWLKT +P P KE Q+HEDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLKTTTPTPQKEWKQTHEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNS+RYLGPA LLQA RW+ DSRDE GERLDNLEDPFRLYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSERYLGPAALLQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPA+AIA++K+ L++R+I Sbjct: 241 GLNPAEAIAELKLKLVERQI 260 >gi|148251848|ref|YP_001236433.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp. BTAi1] gi|146404021|gb|ABQ32527.1| succinate dehydrogenase subunit B [Bradyrhizobium sp. BTAi1] Length = 260 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 176/260 (67%), Positives = 215/260 (82%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ GK W P G ++E+++YRWNPD+ NP +DTYYVD+++CGPMVL Sbjct: 1 MAEFALPKNSQITGGKTWPKPVGATEVREFKVYRWNPDDGKNPSVDTYYVDVNDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDP+LT RRSCREG+CGSC MNIDG NTLAC K M D+K + + PLPH Sbjct: 61 DGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTKSMHDVKDGAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWLKT SP P KE QSHEDR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLKTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNS RYLGPA LLQA RW+ DSRDE GERLDNLEDPFRLYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSQRYLGPAALLQANRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPA+AIA++K+ L++R+I Sbjct: 241 GLNPAEAIAELKLKLVERQI 260 >gi|288957017|ref|YP_003447358.1| succinate dehydrogenase iron-sulfur protein [Azospirillum sp. B510] gi|288909325|dbj|BAI70814.1| succinate dehydrogenase iron-sulfur protein [Azospirillum sp. B510] Length = 258 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 174/258 (67%), Positives = 210/258 (81%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP S+V GK N G K K ++IYRWNPD+ NP +D+Y VDLD GPM+L Sbjct: 1 MVEFNLPANSKVGVGKTVNVANGAKRAKTFKIYRWNPDDGQNPRVDSYVVDLDKFGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D ++YIKN++D TLT RRSCREGICGSC MNIDGTNTLAC+K + ++ G + +YPLPHM Sbjct: 61 DAIIYIKNQVDSTLTFRRSCREGICGSCAMNIDGTNTLACLKAIDEVPGDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ H Y+Q SI+PWL+T SP P++E LQS EDR K+DGLYEC++C CCSTSC Sbjct: 121 VVKDLVPDLKHIYAQLASIKPWLQTQSPAPSRERLQSPEDRAKLDGLYECILCFCCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGP+ILLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCT++CPKG Sbjct: 181 PSYWWNGDRYLGPSILLQAYRWIADSRDEMTGERLDNLEDPFRLYRCHTIMNCTKACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPAKAIA+IK +++ R+ Sbjct: 241 LNPAKAIAEIKKLMVVRR 258 >gi|146276148|ref|YP_001166307.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter sphaeroides ATCC 17025] gi|145554389|gb|ABP69002.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides ATCC 17025] Length = 258 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 176/259 (67%), Positives = 214/259 (82%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK S+V+ GK W P G +N++++ IYRW+PD NP +DTY++D+D CGPMVL Sbjct: 1 MVQLTLPKNSKVRTGKTWPKPEG-RNVRKFMIYRWDPDTGENPRVDTYFLDMDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+ + +IKG + +YPLPHM Sbjct: 60 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D+S FY+QH SI PWL+T + +PAKE QS EDR K+DGLYECVMCACCSTSC Sbjct: 120 VIKDLIPDLSLFYAQHASIMPWLETKTVEPAKEWRQSVEDRAKLDGLYECVMCACCSTSC 179 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA LL AYRW++DSRDE ERLD LEDPF+LYRCHTIMNC ++CPKG Sbjct: 180 PSYWWNGDRYLGPAALLHAYRWIVDSRDEATPERLDMLEDPFKLYRCHTIMNCAKTCPKG 239 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+++R I Sbjct: 240 LNPAKAIAEIKKMMVERVI 258 >gi|154245907|ref|YP_001416865.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xanthobacter autotrophicus Py2] gi|154159992|gb|ABS67208.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xanthobacter autotrophicus Py2] Length = 261 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 180/261 (68%), Positives = 214/261 (81%), Gaps = 2/261 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S++ GK+W P G K L E+RIYRWNPD+ NP +DTYYVD ++CGPMVL Sbjct: 1 MVELTLPKNSQITPGKVWPKPQGAKKLTEFRIYRWNPDDGRNPRVDTYYVDREDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPH 118 DGL++IKN +DPTLT RRSCREG+CGSC MNI GTNTLAC K M ++ + +YPLPH Sbjct: 61 DGLIWIKNTVDPTLTFRRSCREGVCGSCAMNIGGTNTLACTKGMDEVLVKGVVNIYPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M V+KDLV D++HFY+QH SIEPWL+T SP P KE Q+ +DR+K+DGLYEC++CACCST Sbjct: 121 MPVVKDLVPDLTHFYAQHASIEPWLQTDSPPPEKEWRQAKDDREKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPA LLQA RWL DSRDE G RLD LEDPFRLYRCHTIMNC Q+CP Sbjct: 181 SCPSYWWNGDRYLGPAALLQATRWLKDSRDERTGARLDYLEDPFRLYRCHTIMNCAQACP 240 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 K LNPAKAIA+IK M+++R+I Sbjct: 241 KSLNPAKAIAEIKKMMVERQI 261 >gi|296532574|ref|ZP_06895280.1| succinate dehydrogenase [Roseomonas cervicalis ATCC 49957] gi|296267099|gb|EFH13018.1| succinate dehydrogenase [Roseomonas cervicalis ATCC 49957] Length = 260 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 168/259 (64%), Positives = 205/259 (79%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M LPK S + G+ A G KN+K ++IYR++PD NP DTY +DLD CGPMVL Sbjct: 1 MATFTLPKNSTIGTGQTHKAEPGAKNVKTFKIYRFDPDTGENPRYDTYEIDLDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++D TLT RRSCREGICGSC MNIDG NTLAC+K ++D+K + + PLPHM Sbjct: 61 DALIKIKNEVDTTLTFRRSCREGICGSCAMNIDGMNTLACLKPIEDVKKDVRITPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+SH Y+Q RSIEPWLK+ +P P E QS E+R K+DGL+EC++C CCST+ Sbjct: 121 VVKDLVPDLSHIYAQLRSIEPWLKSDTPPPPDEERRQSKEERAKLDGLWECILCFCCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+LLQAYRW+ DSRDE+ GERLDNLEDPFRLYRCHTIMNC +CPK Sbjct: 181 CPSYWWNGDRYLGPAVLLQAYRWIADSRDEYTGERLDNLEDPFRLYRCHTIMNCAATCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPA+AI KIK M+++R+ Sbjct: 241 GLNPAQAIGKIKQMMVERQ 259 >gi|121601659|ref|YP_988429.1| succinate dehydrogenase iron-sulfur subunit [Bartonella bacilliformis KC583] gi|120613836|gb|ABM44437.1| succinate dehydrogenase iron-sulfur protein [Bartonella bacilliformis KC583] Length = 259 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 196/259 (75%), Positives = 222/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G K L E++IYRW+PD+ NP +DTYYVD CGPMVL Sbjct: 1 MVQIKLPKNSQVKAGKVWPRPEGAKQLTEFQIYRWSPDDDENPRLDTYYVDRSACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ HFY+QHR IEPWL+TVSP+PAKE LQSH DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKHFYAQHRVIEPWLQTVSPEPAKEWLQSHADRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPAILLQAYRW+ DSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAILLQAYRWIADSRDEMRGERLDNLEDPFRLYRCHTIMNCMQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAI +IK ++L+R++ Sbjct: 241 LNPAKAITEIKKLMLERRL 259 >gi|188583478|ref|YP_001926923.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium populi BJ001] gi|179346976|gb|ACB82388.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium populi BJ001] Length = 274 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 170/274 (62%), Positives = 209/274 (76%), Gaps = 15/274 (5%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S+V G+ W AP G KN++ +RIYRWNPD+ NP +DTY VD D+CGPMVL Sbjct: 1 MAQFNLPKNSQVTEGRSWPAPDGAKNVQVFRIYRWNPDDGKNPRIDTYRVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA---------- 110 D LL+IKNK+DPTL RRSCREGICGSC MNI+G N LAC + + K Sbjct: 61 DALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRK 120 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 + +YPLPHM V+KDLV D+++FY+QH +IEPWL+T +P P KE Q+ EDR ++D Sbjct: 121 DKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHAAIEPWLQTETPAPEKEWKQTPEDRARLD 180 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 GLYEC++CACC+TSCPSYWWN D++LGPA LLQAYRWLIDSRDE GERLD L DPFRLY Sbjct: 181 GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLY 240 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RCHTIMNC +CPK LNPAKAIA+IK M+++R++ Sbjct: 241 RCHTIMNCANTCPKNLNPAKAIAEIKKMMVEREV 274 >gi|319899433|ref|YP_004159530.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella clarridgeiae 73] gi|319403401|emb|CBI76969.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella clarridgeiae 73] Length = 259 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 192/259 (74%), Positives = 224/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G +L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIRLPKNSQVKAGKVWPKPEGATHLTEFHIYRWSPDDEDNPHLDTYYVDRSVCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLT+RRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTIRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++KDLV D+ FY+QHR+IEPWLKTVSP+PAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 IVKDLVPDLKRFYAQHRAIEPWLKTVSPEPAKEWLQSYSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+IDSRDE GERLDNLEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIIDSRDEMSGERLDNLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|170744098|ref|YP_001772753.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium sp. 4-46] gi|168198372|gb|ACA20319.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium sp. 4-46] Length = 260 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 176/260 (67%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S+ GK W P G KNL+E+RIYRWN D+ NP +DTYYVD D+CGPMVL Sbjct: 1 MAQFSLPKNSQYGEGKTWPKPAGAKNLQEFRIYRWNEDDGHNPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHM 119 D LL+IKNK+DPTLT RRSCREGICGSC MNI G NTLAC + D + I +YPLPHM Sbjct: 61 DALLWIKNKVDPTLTFRRSCREGICGSCAMNIMGQNTLACTLGIDDCRSAQIRIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S F++QH +IEPWL+T +P P KE Q+ EDR ++DGLYEC++CACC+TS Sbjct: 121 PVLKDLVPDLSSFFAQHAAIEPWLQTETPSPEKEWRQTPEDRARLDGLYECILCACCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DR+LGPA LLQAYRWLIDSRDE GERLD L DPFRLYRCHTIMNC +CPK Sbjct: 181 CPSYWWNGDRFLGPAALLQAYRWLIDSRDEHTGERLDILHDPFRLYRCHTIMNCANTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK M++ R++ Sbjct: 241 GLNPAKAIAEIKKMMVAREV 260 >gi|260446906|emb|CBG76060.1| succinate dehydrogenase iron-sulfur subunit [Bartonella birtlesii] Length = 259 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 193/259 (74%), Positives = 219/259 (84%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GKIW P G L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIKLPKNSQVKPGKIWPKPEGATQLTEFHIYRWSPDDEENPHLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLT RRSCREGICGSC MNIDG NTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTFRRSCREGICGSCSMNIDGANTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ HFY+QHR IEPWL+TVSP+PAKE LQSH DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKHFYAQHRVIEPWLQTVSPEPAKEWLQSHSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPAILLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAILLQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|315122383|ref|YP_004062872.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495785|gb|ADR52384.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 259 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 232/259 (89%), Positives = 249/259 (96%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVEI+LPKRSRVK+GK WNA +G K L+EYRIYRWNPD++ NP +D YYVDLD+CGPMVL Sbjct: 1 MVEILLPKRSRVKKGKTWNALSGAKRLREYRIYRWNPDDQDNPHIDIYYVDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC+KDMKDIKG I VYPLPHMS Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACIKDMKDIKGIIKVYPLPHMS 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLVVDMS+FY+QHRSIEPWLKTVSPKPAKELLQSH+DRQKIDGLYECVMCACCSTSC Sbjct: 121 VIKDLVVDMSYFYAQHRSIEPWLKTVSPKPAKELLQSHDDRQKIDGLYECVMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPAILLQAYRWL+DSRDE QG+RLDNLEDPFRLYRCHTIMNCTQSCPKG Sbjct: 181 PSYWWNSDRYLGPAILLQAYRWLVDSRDEGQGDRLDNLEDPFRLYRCHTIMNCTQSCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIAKIKMM++DRK+ Sbjct: 241 LNPAKAIAKIKMMMVDRKV 259 >gi|170746894|ref|YP_001753154.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium radiotolerans JCM 2831] gi|170653416|gb|ACB22471.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium radiotolerans JCM 2831] Length = 274 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 167/274 (60%), Positives = 207/274 (75%), Gaps = 15/274 (5%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LPK S++ +GK W AP G +NL+ ++IYRWNPD+ NP +DTY VD ++CGPMVL Sbjct: 1 MAQFNLPKNSQITQGKSWPAPPGARNLQTFKIYRWNPDDGANPRIDTYQVDREDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA---------- 110 D LL+IKNK+D TL RRSCREGICGSC MNI+G N LAC + + K Sbjct: 61 DALLWIKNKVDSTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKSPDNALPVMTRK 120 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 I +YPLPHM V+KDLV D+++FY+QH +IEPWL+T +P P KE Q+ EDR ++D Sbjct: 121 DRDGAIRIYPLPHMPVLKDLVPDLTNFYAQHAAIEPWLQTETPAPEKEWRQTPEDRSRLD 180 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 GLYEC++CACC+TSCPSYWWN D++LGPA LLQAYRWLIDSRDE G RLD L DPFRLY Sbjct: 181 GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGHRLDGLHDPFRLY 240 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RCHTIMNC +CPK LNPAKAIA+IK M+++R + Sbjct: 241 RCHTIMNCANTCPKSLNPAKAIAEIKKMMVERTL 274 >gi|319406312|emb|CBI79949.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella sp. AR 15-3] Length = 259 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 194/259 (74%), Positives = 224/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G +L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIRLPKNSQVKTGKVWPKPEGATHLTEFHIYRWSPDDEENPHLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 +IKDLV D+ HFY+QHR+IEPWLKTVSPKPAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 IIKDLVPDLKHFYAQHRTIEPWLKTVSPKPAKEWLQSYTDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW++DSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIVDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|299133113|ref|ZP_07026308.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] gi|298593250|gb|EFI53450.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] Length = 260 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 204/260 (78%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S V GK W P +EY IYRW+PD+ NP MDTYYV+ +CGPM+L Sbjct: 1 MVEFALPKNSTVTDGKTWPKPEAAGETREYHIYRWSPDDGQNPRMDTYYVNTADCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHM 119 DGL++IKN +DPTLT RRSCREG+CGSC MNIDG NTLAC + M + G I + PLPH Sbjct: 61 DGLIWIKNHVDPTLTFRRSCREGVCGSCAMNIDGQNTLACTRAMNEVDSGPITIRPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWL T + P KE QS ++R K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLHTTTATPQKEWRQSIQERSKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDRYLGPA LLQA RW+ DSRDE G RLDNLEDPFRLYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDRYLGPAALLQADRWVNDSRDEATGARLDNLEDPFRLYRCHTIMNCTKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA +K +++R++ Sbjct: 241 GLNPAKAIADLKAKMVERQV 260 >gi|262277894|ref|ZP_06055687.1| succinate dehydrogenase iron-sulfur subunit [alpha proteobacterium HIMB114] gi|262224997|gb|EEY75456.1| succinate dehydrogenase iron-sulfur subunit [alpha proteobacterium HIMB114] Length = 260 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 161/258 (62%), Positives = 201/258 (77%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S++K+G + + + KN+K+ +YRWNPD NP +DTY VD+DNCGPMVL Sbjct: 1 MVQFNLPKNSKIKKGNYFKSVSESKNIKKVNVYRWNPDKDANPRVDTYEVDMDNCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDG+NTLAC K ++IKG I + PLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGSNTLACTKSAREIKGEININPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLV ++ Y Q++S+EPW+++ E LQ+ EDR K+DGLYEC++CACCSTSC Sbjct: 121 VIKDLVPNLKQLYKQYQSVEPWMQSNKSSNGSEGLQTIEDRSKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW+IDSRDE + +RL + D +L+RCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIIDSRDEERQKRLKKVADELKLFRCHTIMNCTNACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNPAKAI IK ML+ K Sbjct: 241 LNPAKAIGSIKKMLVTEK 258 >gi|190573779|ref|YP_001971624.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas maltophilia K279a] gi|194365316|ref|YP_002027926.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas maltophilia R551-3] gi|254522072|ref|ZP_05134127.1| succinate dehydrogenase, iron-sulfur protein [Stenotrophomonas sp. SKA14] gi|190011701|emb|CAQ45320.1| putative succinate dehydrogenase iron-sulfur protein [Stenotrophomonas maltophilia K279a] gi|194348120|gb|ACF51243.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Stenotrophomonas maltophilia R551-3] gi|219719663|gb|EED38188.1| succinate dehydrogenase, iron-sulfur protein [Stenotrophomonas sp. SKA14] Length = 261 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 215/260 (82%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + G KN++ ++IYRW+PD+ NP DTY VDLD CGPMVL Sbjct: 1 MAEFSLPKNSKITKGKHFPVKNGGKNVRTFKIYRWSPDDDSNPRTDTYEVDLDACGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC + + D K + +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTRAISDCGKKEVPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 +V+KDLV D++HFY+Q+ SI+PW++T +P P +E LQS EDR+K+DGLYEC++CACCST Sbjct: 121 NVVKDLVPDLTHFYAQYASIKPWIRTQTPAPPDRERLQSPEDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 181 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK ++++R+ Sbjct: 241 KGLNPALAIAEIKKLMMERR 260 >gi|92119078|ref|YP_578807.1| succinate dehydrogenase iron-sulfur subunit [Nitrobacter hamburgensis X14] gi|91801972|gb|ABE64347.1| succinate dehydrogenase subunit B [Nitrobacter hamburgensis X14] Length = 260 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M LP+ S+ GK W P G +E+R+YRWNPD+ NP +DTYYVD++ CGP VL Sbjct: 1 MANFALPRNSKATGGKTWPKPEGATETREFRVYRWNPDDDKNPSIDTYYVDVNECGPRVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHM 119 DGL++IK+ IDPTLT RRSCREG+CGSC MNIDG NTLAC M D+ G + + PLPH Sbjct: 61 DGLIWIKDHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTTSMHDLAGGVVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWLKT +P P KE LQSHEDR+K+DGLYEC++CACCST+ Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLKTTTPTPQKEWLQSHEDREKLDGLYECILCACCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLD LEDPFRLYRCHTI+NCT++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQAARWVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 LNPA+AIA +K L++R++ Sbjct: 241 KLNPAEAIAMLKRKLVERQV 260 >gi|73667301|ref|YP_303317.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia canis str. Jake] gi|72394442|gb|AAZ68719.1| succinate dehydrogenase subunit B [Ehrlichia canis str. Jake] Length = 258 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 209/258 (81%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ + GK+ +AP KN+K ++IYRW+PD+ NP +DT+++DLD CG MV Sbjct: 1 MVQFCLPKNSKINKNGKVHHAPENAKNVKCFKIYRWSPDDDENPRIDTFFIDLDECGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN++D TLT RRSCREGICGSC MNIDGTNTLAC K + DIK + +YPLPHM Sbjct: 61 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D+S+FY+Q+ S+ PW++ P KE LQ+ EDR K+DG+Y+C++CACCSTS Sbjct: 121 YVIKDLVPDLSNFYAQYESVTPWMQAEEPNHNKERLQTIEDRSKLDGIYDCILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD+YLGPA LLQAYRWLIDSRDE RLD L+D F+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDKYLGPAALLQAYRWLIDSRDEASNSRLDMLDDAFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAIA IK M++ R Sbjct: 241 GLNPAKAIAHIKQMMVRR 258 >gi|332188907|ref|ZP_08390611.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Sphingomonas sp. S17] gi|332011067|gb|EGI53168.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Sphingomonas sp. S17] Length = 259 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 203/258 (78%), Gaps = 2/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S +K+G+ A T LK++++YR++PD+ NP DT+ +DLD CGPMVL Sbjct: 1 MAEFALPKNSVIKKGETHKA-TTSGRLKKFKVYRYDPDSGQNPRYDTFEIDLDECGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K + D +LT RRSCREGICGSC MNIDG N LAC ++D+KG + + PLPHM Sbjct: 60 DALIKMKAEQDSSLTFRRSCREGICGSCAMNIDGRNGLACTTAIEDVKGEVRITPLPHMD 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D +HFY+Q+ SI+PWL+TVSP KE LQS +DR K+DGLYEC++CACCSTS Sbjct: 120 VVKDLVPDFTHFYAQYASIKPWLQTVSPAPSGKERLQSPDDRAKLDGLYECILCACCSTS 179 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC CPK Sbjct: 180 CPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPK 239 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAIA+IK M +R Sbjct: 240 GLNPAKAIAEIKKMEAER 257 >gi|53804152|ref|YP_113997.1| succinate dehydrogenase iron-sulfur subunit [Methylococcus capsulatus str. Bath] gi|53757913|gb|AAU92204.1| succinate dehydrogenase, iron-sulfur protein [Methylococcus capsulatus str. Bath] Length = 260 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 158/259 (61%), Positives = 202/259 (77%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M LPK S V+ GK AP + +K ++YRW+PD GNP +DTY+VD+D CGPMVL Sbjct: 1 MGLFTLPKNSVVQTGKTHPAPESARRVKIVQVYRWDPDAGGNPRLDTYHVDVDRCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TL RRSCREG+CGSC MNIDG NTLAC+K + D + ++PLPH Sbjct: 61 DALIKIKNEIDSTLAFRRSCREGVCGSCAMNIDGRNTLACIKPLSDCGDPVRIHPLPHQP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D++HFY+Q+ S++PW++ +P PA QS +R ++DGL+EC++CACCST+ Sbjct: 121 VIKDLVPDLTHFYAQYASVKPWIEAQTPPPADRERLQSKAERAELDGLHECILCACCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DR+LGPA LLQAYRW+ DSRDE GERLD LEDPF+L+RCHTIMNCT +CPK Sbjct: 181 CPSYWWNGDRFLGPAALLQAYRWIADSRDETTGERLDALEDPFKLFRCHTIMNCTDACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPA+AIA+IK +L++R+ Sbjct: 241 GLNPARAIAEIKKLLVERQ 259 >gi|319404827|emb|CBI78428.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella rochalimae ATCC BAA-1498] Length = 259 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 192/259 (74%), Positives = 223/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G +L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIRLPKNSQVKAGKVWPKPEGATHLTEFHIYRWSPDDEKNPHLDTYYVDRSLCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++KDLV D+ FY+QHR+IEPWLKTVSPKPAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 IVKDLVPDLKRFYAQHRAIEPWLKTVSPKPAKEWLQSYSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW++DSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIVDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|218679778|ref|ZP_03527675.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli CIAT 894] Length = 253 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 197/253 (77%), Positives = 227/253 (89%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G KN +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGAKNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ +YPLPH+ Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMM 253 LNPAKAIA+IK M Sbjct: 241 LNPAKAIAEIKNM 253 >gi|88657846|ref|YP_507137.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia chaffeensis str. Arkansas] gi|88599303|gb|ABD44772.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ehrlichia chaffeensis str. Arkansas] Length = 258 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 208/258 (80%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S+V + GK+ +A G KN+K ++IYRW+PD+ NP +DT+++DLD CG MV Sbjct: 1 MVQFFLPKNSKVNKNGKVHHARKGAKNVKCFKIYRWSPDDDENPRIDTFFIDLDECGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN++D TLT RRSCREGICGSC MNIDGTNTLAC K + DIK + +YPLPHM Sbjct: 61 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVNIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D+S+FY Q+ S+ PW++ P KE LQ+ EDR K+DG+Y+C++CACCSTS Sbjct: 121 HVIKDLVPDLSNFYKQYESVTPWIQAEEPNHNKERLQTIEDRSKLDGIYDCILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD+YLGPA LLQAYRWLIDSRDE RLD L+D F+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDKYLGPAALLQAYRWLIDSRDEASDSRLDVLDDAFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAIA IK M++ R Sbjct: 241 GLNPAKAIAHIKQMMVRR 258 >gi|90421596|ref|YP_529966.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris BisB18] gi|90103610|gb|ABD85647.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris BisB18] Length = 260 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 171/260 (65%), Positives = 214/260 (82%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S+V GK W P G +E+++YRWNP++ NP +DTY+V+ +CGPMVL Sbjct: 1 MVEFSLPKNSKVTSGKTWPKPEGATETREFKVYRWNPEDTKNPSVDTYHVNTHDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC K M D+K + + + PLPH Sbjct: 61 DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVKDSAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWL+T++P P KE Q+HEDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLQTITPTPQKEWRQTHEDRAKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQATRWVKDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 241 GLNPSEAIANLKLKLVERQI 260 >gi|260576584|ref|ZP_05844572.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodobacter sp. SW2] gi|259021188|gb|EEW24496.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodobacter sp. SW2] Length = 258 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 172/257 (66%), Positives = 213/257 (82%), Gaps = 1/257 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S+++ GK W P G KN+++++IYRWNPD+ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQFALPKNSKIRTGKTWPRPDG-KNVRKFQIYRWNPDDGQNPSIDTYFVDMDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IK++IDPTLT RRSCREGICGSC MNIDG N LAC+ + ++KG + +YPLPHM+ Sbjct: 60 DALIKIKDEIDPTLTFRRSCREGICGSCAMNIDGMNRLACIFGLDEVKGDVKIYPLPHMA 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDL+ D++HFY+QH +I PWL+T + +PAKE QS EDR K+DGLYECVMCA CS SC Sbjct: 120 VVKDLIPDLTHFYAQHAAIMPWLETKTARPAKEWRQSIEDRAKLDGLYECVMCASCSASC 179 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSD+YLGPA LL AYRW+IDSRDE ERLD LEDPFR+YRCH I+NCTQ+CPKG Sbjct: 180 PSYWWNSDKYLGPAALLHAYRWVIDSRDEATPERLDALEDPFRVYRCHAILNCTQTCPKG 239 Query: 241 LNPAKAIAKIKMMLLDR 257 LNPAKAIA++K ML+ R Sbjct: 240 LNPAKAIAELKKMLIAR 256 >gi|39933293|ref|NP_945569.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris CGA009] gi|192288646|ref|YP_001989251.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris TIE-1] gi|39652918|emb|CAE25660.1| succinate dehydrogenase iron-sulfur protein subunit [Rhodopseudomonas palustris CGA009] gi|192282395|gb|ACE98775.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodopseudomonas palustris TIE-1] Length = 260 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 173/260 (66%), Positives = 214/260 (82%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G ++E+R+YRWNPD+ NP +DTYYVD +CGPMVL Sbjct: 1 MVEFALPKNSKIVGGKTWPKPEGATEVREFRVYRWNPDDGKNPSVDTYYVDKHDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC K M D++ + + PLPH Sbjct: 61 DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRDDAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SI+PWL+TV+P P KE QSH DR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIQPWLQTVTPTPQKEWRQSHSDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 241 GLNPSEAIANLKLKLVERQI 260 >gi|57239407|ref|YP_180543.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium str. Welgevonden] gi|57161486|emb|CAH58412.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium str. Welgevonden] Length = 258 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 208/258 (80%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ + G+++NAP KN+K ++IYRW+PD+ NP +DT+++DLD CG MV Sbjct: 1 MVQFFLPKNSKINKNGEVYNAPENAKNVKCFKIYRWSPDDDSNPRIDTFFIDLDQCGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC K + DIK + +YPLPHM Sbjct: 61 LDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +VIKDLV D+S+FY Q+ SI PW++ P KE LQS EDR K+DG+Y+C++CACCSTS Sbjct: 121 NVIKDLVPDLSNFYKQYESITPWMQAEEPSHNKERLQSIEDRSKLDGVYDCILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LLQ YRWLIDSRDE +RLD L+D F+LYRCHTIMNCT +CPK Sbjct: 181 CPSYWWNPDKYLGPAALLQVYRWLIDSRDEASDKRLDMLDDAFKLYRCHTIMNCTNTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAIA IK M++ R Sbjct: 241 GLNPAKAIADIKQMMVRR 258 >gi|254439971|ref|ZP_05053465.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Octadecabacter antarcticus 307] gi|198255417|gb|EDY79731.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Octadecabacter antarcticus 307] Length = 259 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 214/259 (82%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LPK SR+ GK W P G KNL++ +IYRW+PD++ NP +DTY+VD+D CGPMVL Sbjct: 1 MVQLTLPKNSRMTMGKTWPKPEGAKNLRKVQIYRWSPDDEKNPSLDTYFVDMDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IK+ IDPTLT RRSCREGICGSC MNIDG NTLAC+ M ++KG I +YPLPHM Sbjct: 61 DALIKIKSDIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDIRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDL+ D++HFY+QH S++PWL+T + KPAKE QS EDR K+DGLYECVMCACCST+C Sbjct: 121 VIKDLIPDLTHFYAQHASVKPWLETKTNKPAKEWKQSIEDRAKLDGLYECVMCACCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D++LGPA LL A RW+ DSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKG Sbjct: 181 PSYWWNGDKFLGPAALLTANRWITDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPA AIA +K M++DR + Sbjct: 241 LNPAAAIANVKKMMIDRTV 259 >gi|319786903|ref|YP_004146378.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudoxanthomonas suwonensis 11-1] gi|317465415|gb|ADV27147.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 216/260 (83%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK SR+ +GK + AP G KN++ +++YRW+PD+ NP DTY +DLD CGPMVL Sbjct: 1 MAEFALPKNSRITKGKHFPAPAGAKNVRTFKVYRWSPDDGANPRTDTYELDLDKCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHM 119 D L+ IKN++DPTLT RRSCREGICGSC MNIDGTNTLAC + + D + + +YPLPHM Sbjct: 61 DALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTRAIADCQKAEVPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 SV+KDLV D++HFY+Q+ SI+PW++T +P P +E LQS EDR+K+DGLYEC++CACCST Sbjct: 121 SVVKDLVPDLTHFYAQYASIKPWIRTQTPAPPDRERLQSPEDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 181 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 241 KGLNPALAIAEIKKLMMARR 260 >gi|319407787|emb|CBI81438.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella sp. 1-1C] Length = 259 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 192/259 (74%), Positives = 223/259 (86%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G +L E+ IYRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIRLPKNSQVKTGKVWPKPEGATHLTEFHIYRWSPDDEKNPHLDTYYVDRSLCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++KDLV D+ FY+QHR+I+PWLKTVSPKPAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 IVKDLVPDLKRFYAQHRAIDPWLKTVSPKPAKEWLQSYSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+IDSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIIDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|163796396|ref|ZP_02190356.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [alpha proteobacterium BAL199] gi|159178246|gb|EDP62790.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [alpha proteobacterium BAL199] Length = 259 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 170/259 (65%), Positives = 208/259 (80%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LP S+VK G + AP G K +K ++IYRW+PD GNP +DTY +D+D C PMVL Sbjct: 1 MAEFTLPANSKVKIGDTYKAPEGAKRIKTFKIYRWDPDKGGNPRLDTYEIDMDTCAPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K + ++ G + +YPLPHM Sbjct: 61 DALIKIKNEIDTTLTFRRSCREGICGSCSMNIDGTNTLACLKPINEVDGEVHIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D+S Y+Q S+EPWL+T + P P +E QS ++R K+DGL+ECV+C CC+TS Sbjct: 121 VIKDLVPDLSVPYAQLASVEPWLQTQTLPSPTEERRQSPDERAKLDGLWECVLCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+LLQAYRW+ DSRDEF GERLD LEDPFRLYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDRYLGPAVLLQAYRWIADSRDEFTGERLDALEDPFRLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 LNPAKAIA+IK +++ R+ Sbjct: 241 SLNPAKAIAEIKKLMVLRQ 259 >gi|91974958|ref|YP_567617.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris BisB5] gi|91681414|gb|ABE37716.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris BisB5] Length = 260 Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 175/260 (67%), Positives = 216/260 (83%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G ++E+R+YRWNPD+ NP +DTYYVD +CGPMVL Sbjct: 1 MVEFALPKNSKIVGGKAWPKPEGATEVREFRVYRWNPDDGNNPSIDTYYVDKHDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC K M D++G + V PLPH Sbjct: 61 DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRGDAVKVTPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SI+PWL+TV+P P KE QSH+DR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIQPWLQTVTPTPQKEWRQSHDDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 241 GLNPSEAIASLKLKLVERQI 260 >gi|323138219|ref|ZP_08073291.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocystis sp. ATCC 49242] gi|322396471|gb|EFX99000.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocystis sp. ATCC 49242] Length = 259 Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 170/257 (66%), Positives = 205/257 (79%), Gaps = 1/257 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP+ S + GK+W P G N++E+RIYR+NPD+ NP +DTY+VD +CGPMVL Sbjct: 1 MVEFTLPRNSVITEGKVWPRPEGATNVREFRIYRYNPDSDANPRIDTYFVDTGDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +++IKNKIDPTLT RRSCREGICGSC MNIDGTNTLAC K M +I+G I +YPLPHM Sbjct: 61 DAIIWIKNKIDPTLTFRRSCREGICGSCSMNIDGTNTLACTKGMDEIEGVIKLYPLPHMG 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ FY QH +IEPWL+ P P KE LQ+ R K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTIFYEQHAAIEPWLQA-GPDPEKERLQTPAQRAKLDGLYECILCACCSTSC 179 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDRYLGPA LLQA+RW+ DSRDE ERL ++D FRLYRCHTIMNCT++CPK Sbjct: 180 PSYWWNSDRYLGPAALLQAHRWISDSRDEATDERLGYVDDAFRLYRCHTIMNCTKACPKH 239 Query: 241 LNPAKAIAKIKMMLLDR 257 L PAKAIA++K M + R Sbjct: 240 LEPAKAIAELKNMAIAR 256 >gi|316931812|ref|YP_004106794.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodopseudomonas palustris DX-1] gi|315599526|gb|ADU42061.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodopseudomonas palustris DX-1] Length = 260 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 174/260 (66%), Positives = 214/260 (82%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G ++E+R+YRWNPD+ NP +DTYYVD +CGPMVL Sbjct: 1 MVEFALPKNSKIVGGKTWPKPEGATEVREFRVYRWNPDDGKNPSVDTYYVDKHDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC K M D++ + V PLPH Sbjct: 61 DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRDDAVKVSPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SI+PWL+TV+P P KE QSH DR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIQPWLQTVTPTPQKEWRQSHSDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 241 GLNPSEAIANLKLKLVERQI 260 >gi|296445356|ref|ZP_06887314.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylosinus trichosporium OB3b] gi|296257117|gb|EFH04186.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylosinus trichosporium OB3b] Length = 262 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 168/257 (65%), Positives = 207/257 (80%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE +LP+ SR GK+W AP G L+E+RIYR++PD NP +DTY+VDLD+CGPMVL Sbjct: 1 MVEFVLPQNSRPVEGKVWPAPEGATRLREFRIYRFDPDTSANPRIDTYFVDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +L+IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC K M +I+GAI +YPLPHM Sbjct: 61 DAILWIKNRIDPTLTFRRSCREGICGSCSMNIDGLNTLACTKGMDEIEGAIKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ FY+QH +IEPWL+ SP P KE LQS +DR K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTDFYAQHAAIEPWLQASSPDPEKERLQSPQDRHKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWNSDR+LGPA LLQA RW+ DSRDE R+ ++D FRLYRCHTI+NC+ +CPKG Sbjct: 181 PSYWWNSDRFLGPAALLQAQRWVADSRDEATETRVAYVDDAFRLYRCHTILNCSNACPKG 240 Query: 241 LNPAKAIAKIKMMLLDR 257 L P AIA++K + + + Sbjct: 241 LRPGTAIAELKNLAIAQ 257 >gi|85714480|ref|ZP_01045468.1| succinate dehydrogenase [Nitrobacter sp. Nb-311A] gi|85698927|gb|EAQ36796.1| succinate dehydrogenase [Nitrobacter sp. Nb-311A] Length = 260 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 165/260 (63%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LP+ S+ GK W P G +E+++YRWNPD+ NP +DT++VD+ CGP VL Sbjct: 1 MVKFALPRNSKATSGKTWPKPQGATETREFKVYRWNPDDDENPRIDTFHVDVHECGPRVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IK+ IDPTLT RRSCREG+CGSC MNI+G NTLAC K M D+ G + + PLPH Sbjct: 61 DGLIWIKDHIDPTLTFRRSCREGVCGSCAMNINGQNTLACTKSMHDVSGDAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWLKT +P P KE QS EDR K+DGLYEC++CACCST+ Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLKTTTPTPQKEWRQSREDRAKLDGLYECILCACCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLD LEDPFRLYRCHTI+NCT++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQAARWVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 LNPA+AIA +K+ L++R++ Sbjct: 241 SLNPAEAIATLKLKLVERQV 260 >gi|240851317|ref|YP_002972720.1| succinate dehydrogenase, iron-sulfur protein [Bartonella grahamii as4aup] gi|240268440|gb|ACS52028.1| succinate dehydrogenase, iron-sulfur protein [Bartonella grahamii as4aup] Length = 259 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 191/259 (73%), Positives = 221/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W+ P G L E+ +YRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIKLPKNSQVKSGKVWSKPEGATKLTEFHVYRWSPDDENNPRLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ FY+QHR IEPWL+TVSP+PAKE LQSH DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKRFYAQHRVIEPWLQTVSPEPAKEWLQSHSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|209967181|ref|YP_002300096.1| succinate dehydrogenase iron-sulfur protein [Rhodospirillum centenum SW] gi|209960647|gb|ACJ01284.1| succinate dehydrogenase iron-sulfur protein [Rhodospirillum centenum SW] Length = 260 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 167/259 (64%), Positives = 210/259 (81%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGE-KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MVE LP SRVK GK + + E K + +RIYR++PD+ NP D + +DLD CGPMV Sbjct: 1 MVEFTLPANSRVKSGKTVRSASKEAKRTRRFRIYRYDPDSGENPREDVFEIDLDKCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L +IKN +D TLT RRSCREGICGSC MNIDG NTLAC+K + ++KG + +YPLPH Sbjct: 61 LDALNHIKNDVDSTLTFRRSCREGICGSCAMNIDGRNTLACLKPIDEVKGDVKIYPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S Y+Q S++PWL+T SP P++E LQS E+R+K++GLYEC++C CC+T+ Sbjct: 121 PVVKDLVPDLSQNYAQLASVKPWLQTQSPAPSRERLQSPEEREKLNGLYECILCFCCTTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+LLQAYR++ DSRDE GERLDNLEDPFRLYRCHTIM+CTQ+CPK Sbjct: 181 CPSYWWNGDRYLGPAVLLQAYRFIADSRDEMTGERLDNLEDPFRLYRCHTIMSCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPAKAIA+IK +L++R+ Sbjct: 241 GLNPAKAIAEIKKLLVERR 259 >gi|209883447|ref|YP_002287304.1| succinate dehydrogenase iron-sulfur subunit [Oligotropha carboxidovorans OM5] gi|209871643|gb|ACI91439.1| succinate dehydrogenase iron-sulfur subunit [Oligotropha carboxidovorans OM5] Length = 260 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 203/260 (78%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S + GK W P G +EY IYRW+PD+ NP +DTYYV+ +CGPM+L Sbjct: 1 MVEFALPKNSTISSGKTWPKPEGATETREYHIYRWSPDDNQNPRIDTYYVNTADCGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC G I + PLPH Sbjct: 61 DGLIWIKNHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTCAASDVASGPITIRPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWL T + P KE QS E+R+++DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLHTTTATPQKEWRQSIEERRELDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LL A RW+ DSRDE GERLDNLEDPFRLYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLAADRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCTKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP+KAIA +K L++R++ Sbjct: 241 GLNPSKAIADLKRKLVERQV 260 >gi|86747450|ref|YP_483946.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris HaA2] gi|86570478|gb|ABD05035.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris HaA2] Length = 269 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 176/260 (67%), Positives = 215/260 (82%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK W P G ++E+R+YRWNPD+ NP +DTYYVD +CGPMVL Sbjct: 10 MVEFALPKNSKIVGGKAWPKPEGATEVREFRVYRWNPDDGKNPSVDTYYVDKHDCGPMVL 69 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN IDPTLT RRSCREG+CGSC MNIDG NTLAC K M D++G + V PLPH Sbjct: 70 DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRGEAVKVNPLPHQ 129 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWL+TV+P P KE QSH DR+K+DGLYEC++CACCSTS Sbjct: 130 PVVKDLVPDLTNFYAQYASIEPWLQTVTPTPQKEWRQSHADREKLDGLYECILCACCSTS 189 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 190 CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 249 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 250 GLNPSEAIASLKLKLVERQI 269 >gi|15837675|ref|NP_298363.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa 9a5c] gi|9106020|gb|AAF83883.1|AE003943_14 succinate dehydrogenase iron-sulfur protein [Xylella fastidiosa 9a5c] Length = 261 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 208/260 (80%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G + A +G KN + +++YRWNPD+ NP DTY +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGTHFPAKSGTKNARTFKVYRWNPDDDANPHTDTYEIDLDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + I +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCST 178 +VIKDL+ D++HFY+Q+ SI+PW++T +P P DR+K+DGLYEC++CACCST Sbjct: 121 NVIKDLIPDLTHFYAQYASIKPWMRTQTPPPPDRERLQSPGDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNGDRYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA+AIA+IK +++ R+ Sbjct: 241 KGLNPAQAIAEIKKLMMLRR 260 >gi|58579379|ref|YP_197591.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium str. Welgevonden] gi|58617434|ref|YP_196633.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium str. Gardel] gi|58417046|emb|CAI28159.1| Succinate dehydrogenase iron-sulfur protein [Ehrlichia ruminantium str. Gardel] gi|58418005|emb|CAI27209.1| Succinate dehydrogenase iron-sulfur protein [Ehrlichia ruminantium str. Welgevonden] Length = 264 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 208/258 (80%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ + G+++NAP KN+K ++IYRW+PD+ NP +DT+++DLD CG MV Sbjct: 7 MVQFFLPKNSKINKNGEVYNAPENAKNVKCFKIYRWSPDDDSNPRIDTFFIDLDQCGQMV 66 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC K + DIK + +YPLPHM Sbjct: 67 LDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHM 126 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +VIKDLV D+S+FY Q+ SI PW++ P KE LQS EDR K+DG+Y+C++CACCSTS Sbjct: 127 NVIKDLVPDLSNFYKQYESITPWMQAEEPSHNKERLQSIEDRSKLDGVYDCILCACCSTS 186 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA LLQ YRWLIDSRDE +RLD L+D F+LYRCHTIMNCT +CPK Sbjct: 187 CPSYWWNPDKYLGPAALLQVYRWLIDSRDEASDKRLDMLDDAFKLYRCHTIMNCTNTCPK 246 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAIA IK M++ R Sbjct: 247 GLNPAKAIADIKQMMVRR 264 >gi|83592541|ref|YP_426293.1| succinate dehydrogenase iron-sulfur subunit [Rhodospirillum rubrum ATCC 11170] gi|83575455|gb|ABC22006.1| succinate dehydrogenase subunit B [Rhodospirillum rubrum ATCC 11170] Length = 260 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 209/258 (81%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP SRVK GK + AP G K LK ++IYRW+P+ GNP +DT+ +DLD+CGPMVL Sbjct: 1 MVEFALPPNSRVKEGKTFPAPDGAKRLKRFKIYRWDPEEGGNPRLDTFQIDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L IKN+IDPTLT RRSCREGICGSC MNID N+LAC+K + +++G + +YPLPH+ Sbjct: 61 DALNKIKNEIDPTLTYRRSCREGICGSCSMNIDSNNSLACLKPIAEVEGDVEIYPLPHLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++H Y+Q+ +IEPWLKT SP P KE LQS E+R ++DGL+EC++C CC TS Sbjct: 121 VVKDLVPDLTHIYAQYNAIEPWLKTDSPPPPAKERLQSPEERARLDGLWECILCFCCQTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNS+RYLGPAILLQA RW+ DSRDE GERLD L+DPFRL+RCHTIMNCT +CPK Sbjct: 181 CPSYWWNSERYLGPAILLQAARWVFDSRDEATGERLDMLDDPFRLFRCHTIMNCTATCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNP KAIA +K+ + +R Sbjct: 241 GLNPGKAIADLKIKMFER 258 >gi|28198270|ref|NP_778584.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa Temecula1] gi|182680907|ref|YP_001829067.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa M23] gi|28056340|gb|AAO28233.1| succinate dehydrogenase iron-sulfur protein [Xylella fastidiosa Temecula1] gi|182631017|gb|ACB91793.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylella fastidiosa M23] gi|307579375|gb|ADN63344.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa subsp. fastidiosa GB514] Length = 261 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 210/260 (80%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G + A +G KN + +++YRWNPD+ NP DTY +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGTHFPAKSGTKNARTFKVYRWNPDDDANPRTDTYEIDLDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + I +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 +VIKDL+ D++HFY+Q+ SI+PW++T +P P QS DR+K+DGLYEC++CACCST Sbjct: 121 NVIKDLIPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNGDRYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA+AIA+IK +++ R+ Sbjct: 241 KGLNPAQAIAEIKKLMMLRR 260 >gi|254690046|ref|ZP_05153300.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 6 str. 870] Length = 249 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 198/249 (79%), Positives = 220/249 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK SR++ GK W P G + E+RIYRW+PD+ NP +DTYYVD D+CGPMVL Sbjct: 1 MVELALPKNSRMQEGKTWPRPDGATRVTEFRIYRWSPDDDENPRIDTYYVDRDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDG NTLAC K M DIKG I VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+++FY+QHRSIEPWLKTVSP+P KE LQSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLNNFYAQHRSIEPWLKTVSPEPQKEWLQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRWLIDSRDE +GERLDNLEDPFRLYRCHTIMNC Q+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKG 240 Query: 241 LNPAKAIAK 249 LNPAKAIA+ Sbjct: 241 LNPAKAIAE 249 >gi|85708776|ref|ZP_01039842.1| succinate dehydrogenase [Erythrobacter sp. NAP1] gi|85690310|gb|EAQ30313.1| succinate dehydrogenase [Erythrobacter sp. NAP1] Length = 260 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 170/261 (65%), Positives = 206/261 (78%), Gaps = 3/261 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M LPK S++K GK+ A G K +K +++YR++PD+ NP D + +DLD+CGPMV Sbjct: 1 MATFTLPKNSKIKPSGKVHKA-DGAKRVKSFKVYRYDPDSGENPRYDKFEIDLDDCGPMV 59 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD LL IKN+IDPTLT RRSCREGICGSC MN++G N LAC ++D+KG I + PLPHM Sbjct: 60 LDALLKIKNEIDPTLTFRRSCREGICGSCSMNLNGANGLACTTAIEDLKGEIRITPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D +HFY+Q+ SI PWL+TVSP KE LQ+ E R+K+DGLYEC++CACCST Sbjct: 120 DVIKDLVPDFTHFYAQYASIRPWLQTVSPTPSGKERLQTPEQREKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD++LGPAILLQAYRWL DSRDE GERL+ LEDPFRLYRCHTIMNC CP Sbjct: 180 SCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLNELEDPFRLYRCHTIMNCANVCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PAKAIA+ K M+ +R I Sbjct: 240 KGLSPAKAIAETKKMMAERAI 260 >gi|49474754|ref|YP_032796.1| succinate dehydrogenase iron-sulfur subunit [Bartonella quintana str. Toulouse] gi|49240258|emb|CAF26728.1| Succinate dehydrogenase, iron-sulfur protein [Bartonella quintana str. Toulouse] Length = 259 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 190/259 (73%), Positives = 221/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P G L E+ +YRW+PD++ NP +DT+YVD CGPM+L Sbjct: 1 MVQIKLPKNSQVKAGKVWPKPEGATQLTEFHVYRWSPDDEENPRLDTFYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ FY+QHR IEPWL+TVSP+PAKE LQS+ DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKRFYAQHRVIEPWLQTVSPEPAKEWLQSYSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPA+LLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGDRYLGPAVLLQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMIERRL 259 >gi|49476232|ref|YP_034273.1| succinate dehydrogenase iron-sulfur subunit [Bartonella henselae str. Houston-1] gi|49239040|emb|CAF28340.1| Succinate dehydrogenase, iron-sulfur protein [Bartonella henselae str. Houston-1] Length = 259 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 193/259 (74%), Positives = 221/259 (85%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+VK GK+W P K L E+ +YRW+PD++ NP +DTYYVD CGPM+L Sbjct: 1 MVQIKLPKNSQVKPGKVWPKPKDAKQLTEFHVYRWSPDDEENPHLDTYYVDRSACGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLL+IKN IDPTLTLRRSCREGICGSC MNIDGTNTLAC K M D+K I VYPLP M Sbjct: 61 DGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+ FY+QHR IEPWL+TVSP+PAKE LQSH DRQKIDGLYEC++CACC TSC Sbjct: 121 VVKDLVPDLKRFYAQHRVIEPWLQTVSPEPAKEWLQSHSDRQKIDGLYECILCACCQTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN DRYLGPAILLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCTQ+CPKG Sbjct: 181 PSYWWNGDRYLGPAILLQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK ++++R++ Sbjct: 241 LNPAKAIAEIKKLMVERRL 259 >gi|222825042|dbj|BAH22200.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Cadra cautella] Length = 262 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 166/259 (64%), Positives = 213/259 (82%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S+V K+GK++ PTG KN++ ++IYRW+ D+ NP +DT+++D+DNCGPMV Sbjct: 1 MVQFSLPKNSKVNKKGKVYPTPTGAKNIRRFQIYRWSADDDKNPRIDTFFIDMDNCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC K + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCST 178 ++KDLV D+S FY Q++SI+PWL+T KE QS EDR+K+DGL +C++CACCST Sbjct: 121 YIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPSYWWN D++LGPAILLQAYRW+ DSRD + ERL +L DPF+LYRCHTIMNCT++CP Sbjct: 181 GCPSYWWNGDKFLGPAILLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KGLNPAKAIAK+K ++++R Sbjct: 241 KGLNPAKAIAKVKQLMVER 259 >gi|71275600|ref|ZP_00651885.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Dixon] gi|71899497|ref|ZP_00681654.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Ann-1] gi|170729592|ref|YP_001775025.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa M12] gi|71163491|gb|EAO13208.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Dixon] gi|71730717|gb|EAO32791.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Ann-1] gi|167964385|gb|ACA11395.1| Succinate dehydrogenase (ubiquinone) [Xylella fastidiosa M12] Length = 261 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 209/260 (80%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G + A +G KN + +++YRWNPD+ NP DTY +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGTHFPAKSGTKNARTFKVYRWNPDDDANPRTDTYEIDLDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + I +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 +VIKDL+ D++HFY+Q+ SI+PW++T +P P QS DR+K+DGLYEC++CACCST Sbjct: 121 NVIKDLIPDLTHFYAQYASIKPWMRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNGDRYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 241 KGLNPAHAIAEIKKLMMLRR 260 >gi|149184662|ref|ZP_01862980.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter sp. SD-21] gi|148831982|gb|EDL50415.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter sp. SD-21] Length = 260 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 164/261 (62%), Positives = 200/261 (76%), Gaps = 3/261 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M LPK S++ + ++ A G +K++++YR++PD NP DT+ +DLD CGPMV Sbjct: 1 MATFTLPKNSKITGKSRVHKA-EGAARVKKFKVYRYDPDTGENPRYDTFEIDLDECGPMV 59 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L IKN++DPTLT RRSCREGICGSC MN++G N LAC + D+KG I + PLPHM Sbjct: 60 LDALFKIKNEVDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIDDLKGEIRITPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D +HFY+Q+ SI PWL+T + KE LQS E R+K+DGLYEC++CACCST Sbjct: 120 EVIKDLVPDFTHFYAQYASIRPWLQTVSTTPSGKERLQSPEQREKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC CP Sbjct: 180 SCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDQLEDPFRLYRCHTIMNCANVCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PAKAIA+ K M+ +R I Sbjct: 240 KGLSPAKAIAETKKMMAERAI 260 >gi|190570992|ref|YP_001975350.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019509|ref|ZP_03335315.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357264|emb|CAQ54688.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994931|gb|EEB55573.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 262 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 167/259 (64%), Positives = 213/259 (82%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S+V K+GKI+ PTG KN++ ++IYRW+ D+ NP +DT+++D+DNCGPMV Sbjct: 1 MVQFSLPKNSKVNKKGKIYPTPTGAKNIRRFQIYRWSADDDKNPRIDTFFIDMDNCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC K + DIKG + +YPLPHM Sbjct: 61 LDVLIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCST 178 ++KDLV D+S FY Q++SI+PWL+T KE QS EDR+K+DGL +C++CACCST Sbjct: 121 YIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPSYWWN D++LGPAILLQAYRW+ DSRD + ERL +L DPF+LYRCHTIMNCT++CP Sbjct: 181 GCPSYWWNGDKFLGPAILLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KGLNPAKAIAK+K ++++R Sbjct: 241 KGLNPAKAIAKVKQLMVER 259 >gi|115522542|ref|YP_779453.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas palustris BisA53] gi|115516489|gb|ABJ04473.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris BisA53] Length = 260 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 213/260 (81%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ GK+W P G +E+++YRWNPD+ NP +DTYYV+ +CGPMVL Sbjct: 1 MVEFALPKNSKIVGGKVWPKPEGATETREFKVYRWNPDDIKNPSVDTYYVNTLDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 DGL++IKN +DPTLT RRSCREG+CGSC MNIDG NTLAC K M ++K + + PLPH Sbjct: 61 DGLIWIKNNVDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDEVKVGAVKINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SI+PWL+T++P P KE QSH DR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVPDLTNFYAQYASIQPWLQTITPTPQKEWRQSHADRSKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLDNLEDPFR+YRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNP++AIA +K+ L++R+I Sbjct: 241 GLNPSEAIANLKLKLVERQI 260 >gi|91206205|ref|YP_538560.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii RML369-C] gi|157827816|ref|YP_001496880.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii OSU 85-389] gi|123388071|sp|Q1RGP3|DHSB_RICBR RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|91069749|gb|ABE05471.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia bellii RML369-C] gi|157803120|gb|ABV79843.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii OSU 85-389] Length = 261 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 170/258 (65%), Positives = 209/258 (81%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+GK A NL++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGKEHKAKGDVSNLRKIKIYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID T+T RRSCREGICGSC MNIDGTNTLAC+K +++I G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTVTFRRSCREGICGSCAMNIDGTNTLACIKPIEEISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPAPSNAERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI++IK ++ +R Sbjct: 241 GLNPAKAISEIKGLIAER 258 >gi|285018593|ref|YP_003376304.1| succinate dehydrogenase catalytic subunit (iron-sulfur) protein [Xanthomonas albilineans GPE PC73] gi|283473811|emb|CBA16313.1| putative succinate dehydrogenase catalytic subunit (iron-sulfur) protein [Xanthomonas albilineans] Length = 260 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 174/260 (66%), Positives = 211/260 (81%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S + +GK + A G KN++ ++IYRWNPD+ NP DTY VDLD CGPMVL Sbjct: 1 MAEFTLPKNSTIGKGKHYPAK-GAKNVRTFKIYRWNPDDDSNPRTDTYEVDLDACGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + D K + +YPLPHM Sbjct: 60 DALIQIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKREVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SV+KDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVVKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|329847593|ref|ZP_08262621.1| succinate dehydrogenase iron-sulfur subunit [Asticcacaulis biprosthecum C19] gi|328842656|gb|EGF92225.1| succinate dehydrogenase iron-sulfur subunit [Asticcacaulis biprosthecum C19] Length = 258 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 163/254 (64%), Positives = 199/254 (78%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+VK+GK + A K + YRIYR++PD NP DTY VD + GPM+L Sbjct: 1 MVELTLPKNSQVKQGKRYKAAKRTKTTRTYRIYRFDPDTGENPRWDTYEVDSADHGPMLL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L++IKN ID TL RRSCREGICGSC MNI G NTLAC+K + G I + PLPHM Sbjct: 61 DSLIHIKNSIDSTLAFRRSCREGICGSCAMNIGGRNTLACIKGHDEFSGEITIAPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ FY+Q+ SIEP+L+T +P P KE LQ+ ++R K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLTGFYNQYASIEPFLQTKTPDPEKERLQTPKNRDKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LLQAYRW+ DSRDE + ERL+ LEDPF+LYRCHTIMNC Q CPKG Sbjct: 181 PSYWWNQDKYLGPAALLQAYRWIADSRDENRKERLEALEDPFKLYRCHTIMNCAQVCPKG 240 Query: 241 LNPAKAIAKIKMML 254 LNPAKAIA+IK ++ Sbjct: 241 LNPAKAIAEIKKLM 254 >gi|78047801|ref|YP_363976.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036231|emb|CAJ23922.1| putative succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 260 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 208/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPAK-GAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNI+GTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNINGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|75676985|ref|YP_319406.1| succinate dehydrogenase iron-sulfur subunit [Nitrobacter winogradskyi Nb-255] gi|74421855|gb|ABA06054.1| succinate dehydrogenase subunit B [Nitrobacter winogradskyi Nb-255] Length = 260 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 164/260 (63%), Positives = 206/260 (79%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LP++S+V GK W P +E+++YRWNPD+ NP +DT++VDL CGP VL Sbjct: 1 MVKFALPRKSKVTEGKTWPKPGSATETREFKVYRWNPDDDENPRVDTFHVDLHECGPRVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHM 119 DGL++IK+ IDPTLT RRSCREG+CGSC MNI+G NTLAC A+ V PLPH Sbjct: 61 DGLIWIKDHIDPTLTFRRSCREGVCGSCAMNINGQNTLACTQSLHDIPGDAVKVNPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+++FY+Q+ SIEPWLKT +P P KE QS EDR+K+DGLYEC++CACCST+ Sbjct: 121 PVVKDLVPDLTNFYAQYASIEPWLKTATPTPQKEWRQSREDREKLDGLYECILCACCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPA LLQA RW+ DSRDE GERLD LEDPFRLYRCHTI+NCT++CPK Sbjct: 181 CPSYWWNSDRFLGPAALLQAARWVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 LNPA+AIA +K+ L++R++ Sbjct: 241 SLNPAEAIATLKLKLVERQV 260 >gi|329114749|ref|ZP_08243506.1| Succinate dehydrogenase iron-sulfur subunit [Acetobacter pomorum DM001] gi|326695880|gb|EGE47564.1| Succinate dehydrogenase iron-sulfur subunit [Acetobacter pomorum DM001] Length = 260 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 162/260 (62%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LP+ S + +GK + AP G KN++ +RIYRW PD+ NP +D+Y +DLD GPMVL Sbjct: 1 MVELRLPRNSTIGKGKTFPAPAGAKNVRTFRIYRWTPDDDKNPVIDSYELDLDTIGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +++IKN++DPTLT RRSCREGICGSC MNIDG NTLAC+K +KDIKG + +YPLPHM Sbjct: 61 DAIIHIKNEVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++KDLV ++ Y+Q RSI+PW++ S P P E QS E+R K+DG++EC++C CC+TS Sbjct: 121 IVKDLVSNLDGAYAQLRSIQPWMQADSAPPPDSERKQSIEERAKLDGMWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA+LL AYRW+ DSRDE G+RLD LED F+LY C TIMNCTQ+CPK Sbjct: 181 CPSYWWNGDKYLGPAVLLAAYRWIADSRDEHTGDRLDGLEDTFKLYACRTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI +IK + L+RK+ Sbjct: 241 GLNPAKAIGRIKELQLERKV 260 >gi|85374186|ref|YP_458248.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter litoralis HTCC2594] gi|84787269|gb|ABC63451.1| succinate dehydrogenase iron-sulfur protein [Erythrobacter litoralis HTCC2594] Length = 260 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 164/261 (62%), Positives = 204/261 (78%), Gaps = 3/261 (1%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M LP+ S++ + + A +G +K+++IYR++PD+ NP DT+ +DLD GPMV Sbjct: 1 MATFTLPRNSKITGKTRTHKAESG-GRVKKFKIYRYDPDSGENPRYDTFEIDLDQTGPMV 59 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L IKN++DPTLT RRSCREGICGSC MN++G N LAC ++D+KG I + PLPHM Sbjct: 60 LDALFRIKNEVDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGEIRITPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D +HFY+Q+ SI PWL+TV+P KE LQS E R+K+DGLYEC++CACCST Sbjct: 120 EVIKDLVPDFTHFYAQYASIRPWLQTVTPTPSGKERLQSPEQREKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD+LEDPFRLYRCHTIMNC CP Sbjct: 180 ACPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDDLEDPFRLYRCHTIMNCANVCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PAKAIA+ K M+ +R I Sbjct: 240 KGLSPAKAIAETKKMMAERTI 260 >gi|88812339|ref|ZP_01127589.1| succinate dehydrogenase catalytic subunit [Nitrococcus mobilis Nb-231] gi|88790346|gb|EAR21463.1| succinate dehydrogenase catalytic subunit [Nitrococcus mobilis Nb-231] Length = 259 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 166/259 (64%), Positives = 203/259 (78%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LP SR++ G+ AP G KN+K +++YRW+PD GNP +DTY +D D+CG MVL Sbjct: 1 MAKFRLPANSRIQSGRHHPAPVGAKNVKVFKVYRWSPDQGGNPRLDTYEIDRDSCGSMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++D TLT RRSCREG+CGSC MNI G NTLAC K + I+G I VYPLP + Sbjct: 61 DALIKIKNELDSTLTFRRSCREGVCGSCAMNIAGRNTLACTKPIDGIEGEIRVYPLPSLP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV DM+HFY+Q+ SI+PWL+ +P P +E LQS EDR K+DGLYEC++CACC+T Sbjct: 121 VIKDLVPDMTHFYAQYASIKPWLQAKTPTPPNRERLQSREDRAKLDGLYECILCACCTTG 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPS+WWNS RYLGPA+LLQA RWL DSRDE GERLD+LED F+LYRCHTIMNC + CPK Sbjct: 181 CPSWWWNSKRYLGPAVLLQAQRWLADSRDEATGERLDDLEDSFKLYRCHTIMNCVEVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPA+AIA+IK LL R Sbjct: 241 GLNPAQAIARIKGRLLVRG 259 >gi|258541138|ref|YP_003186571.1| succinate dehydrogenase iron-sulfur subunit [Acetobacter pasteurianus IFO 3283-01] gi|256632216|dbj|BAH98191.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635273|dbj|BAI01242.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638328|dbj|BAI04290.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641382|dbj|BAI07337.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644437|dbj|BAI10385.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647492|dbj|BAI13433.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650545|dbj|BAI16479.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653536|dbj|BAI19463.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter pasteurianus IFO 3283-12] Length = 260 Score = 297 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 163/260 (62%), Positives = 208/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LP+ S + +GK + AP G KN++ +RIYRW PD+ NP +D+Y +DLD GPMVL Sbjct: 1 MVELRLPRNSTIGKGKTFPAPAGAKNVRTFRIYRWTPDDDKNPVIDSYELDLDTIGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D +++IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC+K +KDIKG + +YPLPHM Sbjct: 61 DAIIHIKNEIDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++KDLV ++ Y+Q RSI+PW++ S P P E QS E+R K+DG++EC++C CC+TS Sbjct: 121 IVKDLVSNLDGAYAQLRSIQPWMQADSAPPPDSERKQSIEERAKLDGMWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPA+LL AYRW+ DSRDE G+RLD LED F+LY C TIMNCTQ+CPK Sbjct: 181 CPSYWWNGDKYLGPAVLLAAYRWIADSRDEHTGDRLDGLEDTFKLYACRTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI +IK + L+RK+ Sbjct: 241 GLNPAKAIGRIKELQLERKV 260 >gi|326387478|ref|ZP_08209087.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326208134|gb|EGD58942.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 262 Score = 297 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 163/260 (62%), Positives = 202/260 (77%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M LPK S++ + T ++++++YR++PD+ NP DT+ +DLD CGPMVL Sbjct: 3 MATFTLPKNSKITGQSRHHPATTNGRIRKFKVYRYDPDSGENPRYDTFEIDLDQCGPMVL 62 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K+++DP+LT RRSCREGICGSC MN++G N LAC ++D+KG I + PLPHM Sbjct: 63 DALIKMKSELDPSLTFRRSCREGICGSCAMNLNGRNGLACTTAIEDLKGEIRITPLPHMQ 122 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D +HFY+Q+ SI PWL+TVSP KE LQS E R+K+DGLYEC++CACCSTS Sbjct: 123 VIKDLVPDFTHFYAQYASIRPWLQTVSPTPSGKERLQSPEQREKLDGLYECILCACCSTS 182 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSDR+LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC CPK Sbjct: 183 CPSYWWNSDRFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPK 242 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GL+PA+AIA+IK M +R I Sbjct: 243 GLSPARAIAEIKKMQAERAI 262 >gi|87200336|ref|YP_497593.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium aromaticivorans DSM 12444] gi|87136017|gb|ABD26759.1| succinate dehydrogenase subunit B [Novosphingobium aromaticivorans DSM 12444] Length = 260 Score = 297 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 161/258 (62%), Positives = 198/258 (76%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M LPK S++ +A ++++++YR++PD+ NP DT+ +DLD CGPMVL Sbjct: 1 MATFSLPKNSKITGKARHHAAATNGKVRKFKVYRYDPDSGENPRYDTFEIDLDQCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K + DPTLT RRSCREGICGSC MN++G N LAC ++D+ G I + PLPHM Sbjct: 61 DALIKMKGEQDPTLTFRRSCREGICGSCAMNMNGRNGLACTTAIEDLSGDIRITPLPHME 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D +HFY+Q+ SI PWL+TVSP KE LQS E R+K+DGLYEC++CACCSTS Sbjct: 121 VIKDLVPDFTHFYAQYASIRPWLQTVSPTPSGKERLQSPEQREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC CPK Sbjct: 181 CPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GL+PA+AIA+IK M +R Sbjct: 241 GLSPARAIAEIKKMQAER 258 >gi|315497258|ref|YP_004086062.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Asticcacaulis excentricus CB 48] gi|315415270|gb|ADU11911.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Asticcacaulis excentricus CB 48] Length = 258 Score = 297 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 164/254 (64%), Positives = 203/254 (79%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPKRS++K GK + AP+G KN++ Y+IYR++PD+ NP D Y VD GPMVL Sbjct: 1 MVELALPKRSQIKNGKRYKAPSGSKNVRVYKIYRYDPDSGENPRWDKYEVDAKAHGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L++IKN +D TL+ RRSCREGICGSC MNI G NTLAC K ++ G I + PLPHM Sbjct: 61 DALIHIKNNVDSTLSFRRSCREGICGSCAMNIGGRNTLACTKGHEEYNGEITISPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S FY+Q+ SIEP+L++ +P P KE LQS +R K+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSGFYAQYASIEPYLQSTTPDPDKERLQSPANRDKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA LLQAYRW+ DSRD+ +RL++LEDPF+LYRCHTIMNC Q CPKG Sbjct: 181 PSYWWNQDKYLGPAALLQAYRWIADSRDDHTKKRLESLEDPFKLYRCHTIMNCAQVCPKG 240 Query: 241 LNPAKAIAKIKMML 254 LNPAKAIA+IK M+ Sbjct: 241 LNPAKAIAEIKKMM 254 >gi|71899421|ref|ZP_00681580.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Ann-1] gi|71730830|gb|EAO32902.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Xylella fastidiosa Ann-1] Length = 261 Score = 297 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 209/260 (80%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G A +G KN + +++YRWNPD+ NP DTY +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGTHLPAKSGTKNARTFKVYRWNPDDDANPRTDTYEIDLDTCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + I +YPLPHM Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 +VIKDL+ D++HFY+Q+ SI+PW++T +P P QS DR+K+DGLYEC++CACCST Sbjct: 121 NVIKDLIPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN DRYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNGDRYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA+AIA+IK +++ R+ Sbjct: 241 KGLNPAQAIAEIKKLMMLRR 260 >gi|294665035|ref|ZP_06730342.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605192|gb|EFF48536.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 260 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 207/260 (79%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW+ T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWISTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|329891127|ref|ZP_08269470.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta ATCC 11568] gi|328846428|gb|EGF95992.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta ATCC 11568] Length = 265 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 155/256 (60%), Positives = 199/256 (77%), Gaps = 1/256 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+ GK+ AP G KN+K Y++YR++P+ +P D+Y V D+ GPM+L Sbjct: 1 MVQLNLPRGSKPTTGKVHKAPAGAKNVKTYKVYRYDPETDADPRWDSYEVSTDDHGPMLL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L++IKN+IDPTL+ RRSCREGICGSC MNIDG NTLAC K + I + PLPH Sbjct: 61 DALIHIKNEIDPTLSFRRSCREGICGSCSMNIDGRNTLACTKGWDECSSHNITIAPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S FY+Q+ SI+P+L++ P P KE LQS DR+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVTDLSLFYAQYDSIQPYLQSDLPDPEKERLQSPADREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN + YLGPA LLQ+YRW+ DSRD+ +RLD+LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNQEEYLGPAALLQSYRWISDSRDDATQKRLDDLEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLL 255 GLNPAKAIA+ K +++ Sbjct: 241 GLNPAKAIAETKKLMV 256 >gi|21242817|ref|NP_642399.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis pv. citri str. 306] gi|325928373|ref|ZP_08189568.1| succinate dehydrogenase subunit B [Xanthomonas perforans 91-118] gi|21108303|gb|AAM36935.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas axonopodis pv. citri str. 306] gi|50981398|gb|AAT91477.1| succinate dehydrogenase subunit B [Xanthomonas citri] gi|325541249|gb|EGD12796.1| succinate dehydrogenase subunit B [Xanthomonas perforans 91-118] Length = 260 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 208/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPAK-GAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|58581930|ref|YP_200946.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|166712284|ref|ZP_02243491.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv. oryzicola BLS256] gi|294624872|ref|ZP_06703529.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|58426524|gb|AAW75561.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|292600831|gb|EFF44911.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 260 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 208/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|103487715|ref|YP_617276.1| succinate dehydrogenase iron-sulfur subunit [Sphingopyxis alaskensis RB2256] gi|98977792|gb|ABF53943.1| succinate dehydrogenase subunit B [Sphingopyxis alaskensis RB2256] Length = 260 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 161/261 (61%), Positives = 203/261 (77%), Gaps = 3/261 (1%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M E LPK SR ++ GK+ A G ++K +++YR++PD NP DT+ +D + CGPMV Sbjct: 1 MAEFRLPKNSRPQKGGKVHKA-EGATHVKRFKVYRYDPDKGQNPHFDTFEIDTEKCGPMV 59 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ +K++ D TLT RRSCREGICGSC MN++G N LAC ++D+KG I + PLP M Sbjct: 60 LDALIKMKSEQDSTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGDITITPLPAM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D +HFY+Q+ SIEPWLKT + KE LQS +R+K+DGLYEC++CACCST Sbjct: 120 DVIKDLVPDFTHFYAQYASIEPWLKTKTTTPSGKERLQSPAEREKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD++LGPAILLQAYRWL DSRDE GERLD LEDPFRLYRCHTIMNC +CP Sbjct: 180 SCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANACP 239 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KGL+PA+AIA+IK + +R++ Sbjct: 240 KGLSPARAIAEIKKLEAERQV 260 >gi|58584857|ref|YP_198430.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419173|gb|AAW71188.1| Succinate dehydrogenase Fe-S protein, SdhB [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 262 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 164/260 (63%), Positives = 211/260 (81%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ K+GK++ APT KN++ ++IYRW+ D+K NP +DT+++D+DNCG MV Sbjct: 1 MVQFFLPKNSKINKKGKVYPAPTKAKNVRRFQIYRWSADDKKNPRVDTFFIDMDNCGSMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++IDPTLT RRSCREGICGSC MNIDGTNTLAC K + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKSIPDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCST 178 VIKDLV D+S FY Q++S+ PWL+ P + EDR+K+DGL +C++CACCST Sbjct: 121 YVIKDLVSDLSQFYEQYKSVNPWLQADKPNLLNQEYSQSPEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+YWWN+D++LGPAILLQAYRW+ DSRD ERLD L DPF+LYRCHTIM+CT++CP Sbjct: 181 GCPNYWWNNDKFLGPAILLQAYRWIADSRDNKTDERLDALNDPFKLYRCHTIMSCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPAKAIAKIK ++++RK Sbjct: 241 KGLNPAKAIAKIKQLMVERK 260 >gi|121996853|ref|YP_001001640.1| succinate dehydrogenase iron-sulfur subunit [Halorhodospira halophila SL1] gi|121588258|gb|ABM60838.1| succinate dehydrogenase subunit B [Halorhodospira halophila SL1] Length = 262 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 206/260 (79%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEK--NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM 58 M E LP SR+++G + AP EK N++ R+YR++P+ P MDTY +D D+ GPM Sbjct: 1 MAEFRLPANSRIRKGYTYRAPDAEKSENIRRIRVYRYDPEGGATPRMDTYEIDADSAGPM 60 Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 VLD L+ IK+++DPTLT RRSCREGICGSC MNIDGTNTLAC K M +IKG + VYPLPH Sbjct: 61 VLDALIKIKDEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGDVKVYPLPH 120 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCS 177 M V+KDLV DM+HFY+Q+ S+EPW+KT +P P KE LQS E+R+ +DGLYEC++CACCS Sbjct: 121 MDVVKDLVPDMNHFYAQYASLEPWIKTETPTPPDKERLQSKEEREALDGLYECILCACCS 180 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 TSCPSYWWN DRYLGPA LLQAYRW+ DSRDE G+RLD L+D F+LYRCHTIMNCT +C Sbjct: 181 TSCPSYWWNGDRYLGPAALLQAYRWIADSRDEATGKRLDELDDSFKLYRCHTIMNCTATC 240 Query: 238 PKGLNPAKAIAKIKMMLLDR 257 PKGLNP KAI IK ++ +R Sbjct: 241 PKGLNPGKAIGAIKRLIAER 260 >gi|83313052|ref|YP_423316.1| succinate dehydrogenase iron-sulfur subunit [Magnetospirillum magneticum AMB-1] gi|82947893|dbj|BAE52757.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Magnetospirillum magneticum AMB-1] Length = 259 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 213/260 (81%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP SRV+ GK++ A G KN+K ++IYR++PD NP +D+Y +DLD CGPMVL Sbjct: 1 MVEFALPPNSRVQPGKVYKA-VGAKNVKVFKIYRYDPDANANPRLDSYEIDLDACGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DIKG A+YPLPHM Sbjct: 60 DALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEDIKGEAAIYPLPHMP 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++ Y+Q SI+PW++T + P P E LQS E+R+K+DGL+EC++C CC TS Sbjct: 120 VVKDLIPDLTLPYAQLASIKPWMQTQTAPPPDGERLQSPEEREKLDGLWECILCFCCQTS 179 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGP++LLQA RW++DSRDE GERLD+LEDPF+LYRCHTIMNCT++CPK Sbjct: 180 CPSYWWNGDRYLGPSVLLQAARWILDSRDEMTGERLDDLEDPFKLYRCHTIMNCTKTCPK 239 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI IK +++R++ Sbjct: 240 GLNPAKAIGAIKEKIMERRV 259 >gi|84623842|ref|YP_451214.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576495|ref|YP_001913424.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv. oryzae PXO99A] gi|50313518|gb|AAT74622.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv. oryzae] gi|84367782|dbj|BAE68940.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520947|gb|ACD58892.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 260 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 208/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNSRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|21231573|ref|NP_637490.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768306|ref|YP_243068.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. campestris str. 8004] gi|188991445|ref|YP_001903455.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. campestris str. B100] gi|21113260|gb|AAM41414.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573638|gb|AAY49048.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733205|emb|CAP51403.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein [Xanthomonas campestris pv. campestris] Length = 260 Score = 295 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 209/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNKRTFKVYRWDPDGDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTLT RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKAEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|325920384|ref|ZP_08182315.1| succinate dehydrogenase subunit B [Xanthomonas gardneri ATCC 19865] gi|325549131|gb|EGD20054.1| succinate dehydrogenase subunit B [Xanthomonas gardneri ATCC 19865] Length = 260 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 208/260 (80%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNTRTFKVYRWDPDGDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIDACGKAEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|42520570|ref|NP_966485.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034706|ref|ZP_01314642.1| hypothetical protein Wendoof_01000540 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|42410309|gb|AAS14419.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 262 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 161/259 (62%), Positives = 210/259 (81%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ ++GKI+ P KN++ ++IYRW+ D++ NP +DT+++D+D+CGPMV Sbjct: 1 MVQFSLPKNSKINQKGKIYPIPARAKNIRRFQIYRWSADDEKNPRIDTFFIDMDSCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCST 178 VIKDLV D+S FY Q++SI+PWL+ P + EDR+K+DGL +C++CACCST Sbjct: 121 YVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPSYWWNSD++LGPAILLQAYRW+ DSRD GERLD L DPF+LYRCHTIMNCT++CP Sbjct: 181 GCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KGLNPA+AIAK+K ++++R Sbjct: 241 KGLNPARAIAKVKQLMVER 259 >gi|162147198|ref|YP_001601659.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209544251|ref|YP_002276480.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter diazotrophicus PAl 5] gi|161785775|emb|CAP55346.1| Succinate dehydrogenase iron-sulfur protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531928|gb|ACI51865.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gluconacetobacter diazotrophicus PAl 5] Length = 260 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 170/260 (65%), Positives = 210/260 (80%), Gaps = 1/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ +G+I+ A G KN+K +R+YRWNPD+ NP +DTY +DLD GPMVL Sbjct: 1 MVEFSLPKNSQIGKGRIFTAAPGAKNVKPFRVYRWNPDDGANPVVDTYEIDLDTIGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L++IKN +DPTLT RRSCREGICGSC MNIDG NTLAC+K +KD+ A+++YPLPHM Sbjct: 61 DALIHIKNNVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDVHDAVSIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ Y+Q RSIEPWLK+ + P P E QS E+R ++DG++EC++C CC+TS Sbjct: 121 VVKDLVPDLNGAYAQLRSIEPWLKSDTAPPPDSERRQSIEERAELDGMWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA LL AYRW+ DSRDE GERLD LEDP +LY C TIMNCTQ+CPK Sbjct: 181 CPSYWWNGDRYLGPATLLAAYRWIADSRDEHAGERLDALEDPLKLYACRTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAIA+IK + L+RKI Sbjct: 241 GLNPAKAIARIKELQLERKI 260 >gi|325917575|ref|ZP_08179775.1| succinate dehydrogenase subunit B [Xanthomonas vesicatoria ATCC 35937] gi|325536209|gb|EGD08005.1| succinate dehydrogenase subunit B [Xanthomonas vesicatoria ATCC 35937] Length = 260 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 207/260 (79%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +GK + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGKHYPA-QGAKNTRTFKVYRWDPDGDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIDACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 VIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 DVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|330813450|ref|YP_004357689.1| succinate dehydrogenase iron-sulfur protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486545|gb|AEA80950.1| succinate dehydrogenase iron-sulfur protein [Candidatus Pelagibacter sp. IMCC9063] Length = 257 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 158/255 (61%), Positives = 201/255 (78%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LPK S +++GK +++ + KNLK+ +YRWNP++ NP +D+Y V +D CGPMVL Sbjct: 1 MVQFALPKNSTIEKGKHFSSDSKSKNLKKINVYRWNPEDTKNPRVDSYEVAMDECGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID T+T RRSCREGICGSC MNIDG+NTLAC+K ++I G I +YPLPHM Sbjct: 61 DVLIKIKNEIDSTVTFRRSCREGICGSCAMNIDGSNTLACLKPAEEISGDINIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIKDLV D+ Y Q+ SIEPW+++ + E LQS EDR KIDGLYEC++CACCSTSC Sbjct: 121 VIKDLVPDLKQLYKQYESIEPWMQSETTGKEAEKLQSIEDRSKIDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW++DSRD+ + +RL + D +L+RCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIVDSRDDERKKRLKKVADELKLFRCHTIMNCTNACPKG 240 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAI IK ML+ Sbjct: 241 LNPAKAIGSIKKMLV 255 >gi|71082947|ref|YP_265666.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Pelagibacter ubique HTCC1062] gi|71062060|gb|AAZ21063.1| Succinate dehydrogenase iron-sulfur protein [Candidatus Pelagibacter ubique HTCC1062] Length = 257 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 155/255 (60%), Positives = 193/255 (75%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S V++G + TG KN+++ +YRW+P N NP +DTY VD+DNC VL Sbjct: 1 MVQINLPKNSEVQKGNYYQDKTGSKNIRKVNVYRWDPSNGENPRVDTYEVDMDNCPSKVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L IKN+IDP+L RRSC G+CGSC MN+DG N LAC K +I+G I +YPLPH+ Sbjct: 61 DILNKIKNEIDPSLAYRRSCAHGVCGSCAMNMDGKNGLACTKPHSEIEGDINIYPLPHLK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V KDL+ D+S Y Q+ SIEPWLKT + E+LQ+ EDR K+DG YEC+MCACCSTSC Sbjct: 121 VKKDLIGDLSGLYKQYESIEPWLKTNTKVETTEILQTKEDRVKLDGAYECIMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW++DSRD+ + ERL + D +LYRCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIVDSRDDEKKERLKKVADELKLYRCHTIMNCTNACPKG 240 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAIA++K ML Sbjct: 241 LNPAKAIAELKKMLA 255 >gi|91762629|ref|ZP_01264594.1| succinate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] gi|91718431|gb|EAS85081.1| succinate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] Length = 257 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 155/255 (60%), Positives = 193/255 (75%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S V++G + TG KN+++ +YRW+P N NP +DTY VD+DNC VL Sbjct: 1 MVQINLPKNSEVQKGNYYQDKTGSKNIRKVNVYRWDPSNGENPRVDTYEVDMDNCPSKVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L IKN+IDP+L RRSC G+CGSC MN+DG N LAC K +I+G I +YPLPH+ Sbjct: 61 DILNKIKNEIDPSLAYRRSCAHGVCGSCAMNMDGKNGLACTKPHSEIEGDINIYPLPHLK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V KDL+ D+S Y Q+ SIEPWLKT + E+LQ+ EDR K+DG YEC+MCACCSTSC Sbjct: 121 VKKDLIGDLSGLYKQYESIEPWLKTNTKVETTEILQTKEDRVKLDGAYECIMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW++DSRD+ + ERL + D +LYRCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIVDSRDDEKKERLKKVADELKLYRCHTIMNCTNACPKG 240 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAIA++K ML Sbjct: 241 LNPAKAIAELKKMLA 255 >gi|294085396|ref|YP_003552156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664971|gb|ADE40072.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 258 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 153/258 (59%), Positives = 196/258 (75%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LP S++ +G+ + AP +K ++IYRW+PD+ NP +D++ +DLD+CGPMVL Sbjct: 1 MAEFTLPAHSKITKGEAYKAPADSSRVKTFQIYRWSPDDDRNPRIDSFDIDLDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IK++ D +LT RRSCREGICGSC MNIDGTNTLAC+K + D+K + +YPLPHM Sbjct: 61 DALIKIKSEHDSSLTFRRSCREGICGSCSMNIDGTNTLACLKSIDDVKDDVKIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S+ Y Q SIEPWLKT A + +DR+K+DGL+ECV+C CST+ Sbjct: 121 VVKDLVPDLSNAYRQLASIEPWLKTDKTASADGERKQSQDDREKLDGLWECVLCFSCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD YLGPA+LLQAYRW+ DSRD+++ ERLD L+D F LYRCHTIMNC ++CPK Sbjct: 181 CPSYWWNSDEYLGPAVLLQAYRWISDSRDDYKKERLDALDDSFALYRCHTIMNCAKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNP KAIA IK + R Sbjct: 241 GLNPGKAIAGIKGEMARR 258 >gi|56416486|ref|YP_153560.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale str. St. Maries] gi|254994710|ref|ZP_05276900.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale str. Mississippi] gi|269959101|ref|YP_003328890.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma centrale str. Israel] gi|56387718|gb|AAV86305.1| succinate dehydrogenase iron-sulfur protein [Anaplasma marginale str. St. Maries] gi|269848932|gb|ACZ49576.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma centrale str. Israel] Length = 262 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 163/259 (62%), Positives = 206/259 (79%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+I LP+ S++ +GK+ N G + + ++IYRW+PD+ P +DT+Y+DLD CG MV Sbjct: 1 MVQISLPRNSKINPKGKVHNMAEGAQRVGCFKIYRWSPDDDEGPRIDTFYIDLDKCGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN++D TLT RRSCREGICGSC MNIDG+NTLAC K + DIKG + +YPLPHM Sbjct: 61 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 +VIKDLV D+S FY+Q++S+ PWLK P E LQS EDR K+DG+Y+C++CA CST Sbjct: 121 NVIKDLVPDLSDFYAQYKSVSPWLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD+YLGPA+LLQ YRWL DSRDE ERL+ L+D F+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNSDKYLGPAVLLQVYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 K LNPAKAI+KIK ++L R Sbjct: 241 KDLNPAKAISKIKQLMLKR 259 >gi|189184861|ref|YP_001938646.1| succinate dehydrogenase iron-sulfur subunit [Orientia tsutsugamushi str. Ikeda] gi|189181632|dbj|BAG41412.1| succinate dehydrogenase iron-sulfur protein [Orientia tsutsugamushi str. Ikeda] Length = 261 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 209/258 (81%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP S+VK GK + A K +K +YR++PD NP +D + +D++NCGPMVL Sbjct: 1 MVEFRLPPNSKVKVGKRYAAKDSVKKVKRVSVYRYSPDTGDNPRIDIFEIDMENCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNI+GTN LAC+K + DIKG + +YPLPHMS Sbjct: 61 DALIKIKNEIDPTLTFRRSCREGICGSCSMNINGTNGLACIKAINDIKGDVIIYPLPHMS 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV DM+HFY+Q++SIEPWLK + + E LQ+ EDR K+DGLYEC++CACCST+ Sbjct: 121 VIKDLVSDMTHFYAQYQSIEPWLKAETIDITSGERLQTPEDRDKLDGLYECILCACCSTA 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN+D+YLGPA+LLQAYRW+IDSRDE ERLD LED F+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNADKYLGPAVLLQAYRWIIDSRDEHTSERLDQLEDSFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI++IK + +R Sbjct: 241 GLNPAKAISEIKKKMFER 258 >gi|222474855|ref|YP_002563270.1| succinate dehydrogenase iron-sulfur protein (sdhB/frdB) [Anaplasma marginale str. Florida] gi|222418991|gb|ACM49014.1| succinate dehydrogenase iron-sulfur protein (sdhB/frdB) [Anaplasma marginale str. Florida] Length = 262 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 163/259 (62%), Positives = 206/259 (79%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+I LP+ S++ +GK+ N G + + ++IYRW+PD+ P +DT+Y+DLD CG MV Sbjct: 1 MVQISLPRNSKINPKGKVHNMAEGAQRVGCFKIYRWSPDDDEGPRIDTFYIDLDKCGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN++D TLT RRSCREGICGSC MNIDG+NTLAC K + DIKG + +YPLPHM Sbjct: 61 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCST 178 +VIKDLV D+S FY+Q++S+ PWLK P E LQS EDR K+DG+Y+C++CA CST Sbjct: 121 NVIKDLVPDLSDFYAQYKSVSPWLKAQDPVSGTSERLQSVEDRSKLDGIYDCILCASCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWNSD+YLGPA+LLQ YRWL DSRDE ERL+ L+D F+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNSDKYLGPAVLLQVYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 K LNPAKAI+KIK ++L R Sbjct: 241 KDLNPAKAISKIKQLMLKR 259 >gi|254455263|ref|ZP_05068692.1| succinate dehydrogenase iron-sulfur protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082265|gb|EDZ59691.1| succinate dehydrogenase iron-sulfur protein [Candidatus Pelagibacter sp. HTCC7211] Length = 259 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 152/259 (58%), Positives = 189/259 (72%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S V +GK + TG KN+++ +YRW+P + NP +DTY VD+DNC VL Sbjct: 1 MVQINLPKNSEVIKGKYYQDKTGSKNIRKVNVYRWDPSTEENPRIDTYEVDMDNCPSKVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L IKN+IDPTL RRSC G+CGSC MN+ G N LAC +I G I +YPLPH+ Sbjct: 61 DILNKIKNEIDPTLAYRRSCAHGVCGSCAMNMGGKNGLACTTPHAEIDGDIDIYPLPHLK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V +DL+ D+ Y Q++SIEPWLK S K E+ QS E+R K+DG YEC+MCACCSTSC Sbjct: 121 VKRDLIGDLDGLYKQYQSIEPWLKNNSTKDTTEIFQSKEERAKLDGAYECIMCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW+IDSRDE + RL + D +LYRCHTI+NCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIIDSRDEERKARLKKVADELKLYRCHTILNCTSACPKG 240 Query: 241 LNPAKAIAKIKMMLLDRKI 259 LNPAKAIA+IK M+ + Sbjct: 241 LNPAKAIAEIKKMIATANV 259 >gi|58700114|ref|ZP_00374638.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533368|gb|EAL57843.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 270 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 160/259 (61%), Positives = 209/259 (80%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ ++GKI+ P KN++ ++IYRW+ D++ NP +DT+++D+D+CGPMV Sbjct: 1 MVQFSLPKNSKINQKGKIYPIPARAKNIRRFQIYRWSADDEKNPRIDTFFIDMDSCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCST 178 VIKDLV D+S FY Q++SI+PWL+ P + EDR+K+DGL +C++CACCST Sbjct: 121 YVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPSYWWNSD++LGPAILLQAYRW+ DSRD GERLD L DPF+LYRCH IMNCT++CP Sbjct: 181 GCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KGLNPA+AIAK+K ++++R Sbjct: 241 KGLNPARAIAKVKQLMVER 259 >gi|297183592|gb|ADI19719.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 257 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 156/255 (61%), Positives = 195/255 (76%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+I LPK S+V++GK + T KN+++ IYRW+P + NP +DTY VD+D+C VL Sbjct: 1 MVQINLPKNSKVQKGKYYKDTTESKNIRKVNIYRWDPSSGKNPRIDTYEVDMDSCPSKVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L IKN+IDP+L RRSC G+CGSC MN+DG N LAC K +IKG I +YPLPH+ Sbjct: 61 DLLNKIKNEIDPSLAYRRSCSHGVCGSCAMNMDGKNGLACTKPHAEIKGDINIYPLPHLK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V KDL+ D+S Y Q+ SIEPWLKT + +KE+ QS +DR K+DG YEC+MCACCST+C Sbjct: 121 VKKDLIGDLSTLYKQYESIEPWLKTNTKIESKEIFQSKKDRSKLDGAYECIMCACCSTAC 180 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+LLQAYRW+IDSRD+ + ERL + D +LYRCHTIMNCT +CPKG Sbjct: 181 PSYWWNGDKYLGPAVLLQAYRWIIDSRDDERKERLKKVADELKLYRCHTIMNCTNACPKG 240 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAIA+IK ML Sbjct: 241 LNPAKAIAEIKKMLA 255 >gi|225630498|ref|YP_002727289.1| succinate dehydrogenase catalytic subunit [Wolbachia sp. wRi] gi|225592479|gb|ACN95498.1| succinate dehydrogenase catalytic subunit [Wolbachia sp. wRi] Length = 262 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 160/259 (61%), Positives = 209/259 (80%), Gaps = 2/259 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ ++GKI+ P KN++ ++IYRW+ D++ NP +DT+++D+D+CGPMV Sbjct: 1 MVQFSLPKNSKINQKGKIYPIPARAKNIRRFQIYRWSADDEKNPRIDTFFIDMDSCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCST 178 VIKDLV D+S FY Q++SI+PWL+ P + EDR+K+DGL +C++CACCST Sbjct: 121 YVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPSYWWNSD++LGPAILLQAYRW+ DSRD GERLD L DPF+LYRCH IMNCT++CP Sbjct: 181 GCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KGLNPA+AIAK+K ++++R Sbjct: 241 KGLNPARAIAKVKQLMVER 259 >gi|23014375|ref|ZP_00054195.1| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Magnetospirillum magnetotacticum MS-1] Length = 259 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 168/260 (64%), Positives = 213/260 (81%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ LP SRV+ GK++ A G KN+K ++IYR++PD+ NP +D+Y +DLDNCGPMVL Sbjct: 1 MVDFALPANSRVQPGKVYKA-VGAKNVKVFKIYRYDPDSNANPRLDSYEIDLDNCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D LL IKN+ID TLT RRSCREGICGSC MNIDGTNTL+C+K ++DIKG A+YPLPHM Sbjct: 60 DALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLSCLKPIEDIKGDAAIYPLPHMP 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDL+ D++ Y+Q S++PW++T + P P E LQS E+R+K+DGL+EC++C CC TS Sbjct: 120 VVKDLIPDLTRPYAQLASVKPWMQTQTAPPPDGERLQSPEEREKLDGLWECILCFCCQTS 179 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA+LLQA RW++D+RDE GERLD LEDPF+LYRCHTIMNCT++CPK Sbjct: 180 CPSYWWNGDRYLGPAVLLQAARWILDTRDEMTGERLDALEDPFKLYRCHTIMNCTKTCPK 239 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI IK + +R+I Sbjct: 240 GLNPAKAIGAIKEKIAERRI 259 >gi|88606897|ref|YP_504783.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma phagocytophilum HZ] gi|88607770|ref|YP_504786.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma phagocytophilum HZ] gi|47060300|gb|AAT09766.1| succinate dehydrogenase subunit B [Anaplasma phagocytophilum] gi|88597960|gb|ABD43430.1| succinate dehydrogenase, iron-sulfur protein [Anaplasma phagocytophilum HZ] gi|88598833|gb|ABD44303.1| succinate dehydrogenase, iron-sulfur protein [Anaplasma phagocytophilum HZ] Length = 262 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 165/258 (63%), Positives = 201/258 (77%), Gaps = 2/258 (0%) Query: 1 MVEIMLPKRSRVK-RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ GK++NA G K ++IYRW+PD+ NP +DTYY+DLD CG MV Sbjct: 1 MVQFSLPKNSKINPNGKVYNATEGAKRTGCFKIYRWSPDDGENPRIDTYYIDLDKCGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ +KN+ D TLT RRSCREGICGSC MNIDGTNTLAC K + DIKG + ++PLPHM Sbjct: 61 LDALIKVKNEYDSTLTFRRSCREGICGSCAMNIDGTNTLACTKYISDIKGDVKIFPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCST 178 VIKDLV D+S+FY Q++SI PWLK+ +E LQS EDR K+D +Y+C++CACCST Sbjct: 121 DVIKDLVPDLSNFYKQYKSISPWLKSDGARSDREEHLQSIEDRSKLDKVYDCILCACCST 180 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN D+YLGPA LLQ YRWL+DSRD ERL LED F+LYRCHTIMNCT++CP Sbjct: 181 SCPSYWWNPDKYLGPAALLQVYRWLVDSRDTATEERLAFLEDAFKLYRCHTIMNCTKTCP 240 Query: 239 KGLNPAKAIAKIKMMLLD 256 K LNPAKAIAKIK M++ Sbjct: 241 KDLNPAKAIAKIKQMMIK 258 >gi|148284922|ref|YP_001249012.1| succinate dehydrogenase iron-sulfur subunit [Orientia tsutsugamushi str. Boryong] gi|146740361|emb|CAM80794.1| Succinate dehydrogenase iron-sulfur protein [Orientia tsutsugamushi str. Boryong] Length = 263 Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 210/258 (81%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LP S+VK GK + A K +K +YR++PD NP +D + +D++NCGPMVL Sbjct: 3 MVEFRLPPNSKVKVGKRYVAKDSVKRVKRVSVYRYSPDTGDNPRIDIFEIDMENCGPMVL 62 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+IDPTLT RRSCREGICGSC MNI+GTN LAC+K + DIKG + +YPLPHMS Sbjct: 63 DALIKIKNEIDPTLTFRRSCREGICGSCSMNINGTNGLACIKAINDIKGDVIIYPLPHMS 122 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV DM+HFY+Q++SIEPWLK + + E LQ+ EDR K+DGLYEC++CACCST+ Sbjct: 123 VIKDLVSDMTHFYAQYQSIEPWLKAETIDITSGERLQTPEDRDKLDGLYECILCACCSTA 182 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN+D+YLGPA+LLQAYRW+IDSRDE+ ERLD LED F+LYRCHTIMNCT++CPK Sbjct: 183 CPSYWWNADKYLGPAVLLQAYRWIIDSRDEYASERLDQLEDSFKLYRCHTIMNCTKTCPK 242 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI++IK + +R Sbjct: 243 GLNPAKAISEIKKKMFER 260 >gi|302381550|ref|YP_003817373.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brevundimonas subvibrioides ATCC 15264] gi|302192178|gb|ADK99749.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brevundimonas subvibrioides ATCC 15264] Length = 265 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 197/261 (75%), Gaps = 3/261 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+ GK+ AP G +N+K Y++YR++P+ +P D Y V D+ GPM+L Sbjct: 1 MVQLTLPRGSKPTAGKVHKAPAGARNVKTYKVYRYDPEVDADPRWDLYEVSADDHGPMLL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHM 119 D L++IK+ IDPTL RRSCREGICGSC MNIDG NTLAC K + IA+ PLPH Sbjct: 61 DALIHIKSTIDPTLAFRRSCREGICGSCSMNIDGRNTLACTKGWDECSSSTIAINPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++ FY+Q+ SI+P+L++ P P E LQS EDR K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVTDLTLFYAQYDSIKPYLQSDDPDPTTERLQSPEDRAKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN YLGPA LLQ+YRW+ DSRD+ RLD+LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNQTEYLGPAALLQSYRWISDSRDDQTQARLDDLEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLL--DRK 258 GLNPAKAIA+ K +++ DRK Sbjct: 241 GLNPAKAIAETKKLMIAPDRK 261 >gi|157964109|ref|YP_001498933.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia massiliae MTU5] gi|157843885|gb|ABV84386.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia massiliae MTU5] Length = 261 Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats. Identities = 170/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ K+ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPKKIKIYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|289665886|ref|ZP_06487467.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 260 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 167/260 (64%), Positives = 207/260 (79%), Gaps = 3/260 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G+ + A G KN + +++YRW+ D NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGRHYPA-QGAKNTRTFKVYRWDSDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 KGLNPA AIA+IK +++ R+ Sbjct: 240 KGLNPALAIAEIKKLMMARR 259 >gi|254418480|ref|ZP_05032204.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brevundimonas sp. BAL3] gi|196184657|gb|EDX79633.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Brevundimonas sp. BAL3] Length = 265 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 149/256 (58%), Positives = 197/256 (76%), Gaps = 1/256 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV++ LP+ S+ +GK+ A G K+++ Y++YR++P+ +P D Y V + GPM+L Sbjct: 1 MVQLSLPRGSKPTKGKVHKAAPGSKDVRTYKVYRYDPEVDADPRWDVYEVPTGDHGPMLL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHM 119 D L++IKN IDPTL+ RRSCREGICGSC MNIDG NTLAC K + + I + PLPH Sbjct: 61 DALIHIKNTIDPTLSFRRSCREGICGSCSMNIDGRNTLACTKGWDECESHNITIAPLPHQ 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D+S FY+Q+ SI+P+L++ P P KE LQ+ +R+K+DGLYEC++CACCSTS Sbjct: 121 PVVKDLVTDLSLFYAQYDSIQPYLQSDEPDPEKERLQTPAEREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN + YLGPA LLQ+YRW+ DSRD+ +RLD+LEDPF+LYRCHTIMNC Q CPK Sbjct: 181 CPSYWWNQEEYLGPAALLQSYRWISDSRDDATQKRLDDLEDPFKLYRCHTIMNCAQVCPK 240 Query: 240 GLNPAKAIAKIKMMLL 255 GLNPAKAIA+ K +++ Sbjct: 241 GLNPAKAIAETKKLMV 256 >gi|15891992|ref|NP_359706.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia conorii str. Malish 7] gi|20137875|sp|Q92JJ8|DHSB_RICCN RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|15619106|gb|AAL02607.1| succinate dehydrogenase iron-sulfur protein [Rickettsia conorii str. Malish 7] Length = 261 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPM+L Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMIL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|330991159|ref|ZP_08315112.1| Succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter sp. SXCC-1] gi|329761745|gb|EGG78236.1| Succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter sp. SXCC-1] Length = 260 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 169/259 (65%), Positives = 204/259 (78%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S V +G+I+ A G N+K +RIYRW+PD+ NP +DTY +DLD GPMVL Sbjct: 1 MVEFRLPKNSTVGKGRIFTATPGASNVKNFRIYRWSPDDDRNPVVDTYEIDLDKIGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L++IKN +D TLT RRSCREGICGSC MNI G NTLAC+K ++DI+G IA+YPLPHM Sbjct: 61 DALIHIKNDVDSTLTFRRSCREGICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLV D+ Y+Q RSIEPWLK+ + P P E QS E+R ++DG++EC++C CCSTS Sbjct: 121 VIKDLVPDLDGAYAQLRSIEPWLKSDTLPPPDSERRQSIEERAELDGMWECILCFCCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA LL AYRW+ DSRDE G+RLD LEDP +LY C TIMNCTQ+CPK Sbjct: 181 CPSYWWNGDRYLGPATLLAAYRWIADSRDEHTGDRLDALEDPLKLYACRTIMNCTQTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 GLNPAKAI +IK + L+RK Sbjct: 241 GLNPAKAIGRIKELQLERK 259 >gi|15603923|ref|NP_220438.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii str. Madrid E] gi|6919864|sp|Q9ZEA1|DHSB_RICPR RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|3860614|emb|CAA14515.1| SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN (sdhB) [Rickettsia prowazekii] gi|292571640|gb|ADE29555.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia prowazekii Rp22] Length = 261 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 166/258 (64%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LP S VK+G+ A ++ ++YR++PD NP +D++ +DL GPMVL Sbjct: 1 MVELRLPSNSVVKKGREHKAQQKMLKPRKVKVYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLK SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKNDSPAPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ G RL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI ++K ++ +R Sbjct: 241 GLNPAKAIGRVKNLIAER 258 >gi|254486146|ref|ZP_05099351.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. GAI101] gi|214043015|gb|EEB83653.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. GAI101] Length = 248 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 172/248 (69%), Positives = 209/248 (84%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID 71 + GK W P G KNLK++++YRWNPD+ NP +DTY+VD+D CGPM+LD L+ IKN+ID Sbjct: 1 MTTGKTWPKPEGAKNLKQFQVYRWNPDDGKNPAIDTYFVDMDTCGPMILDALIKIKNEID 60 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 PTLT RRSCREGICGSC MNIDG NTLAC ++++KGA+ +YPLPHM V+KDL+ D++H Sbjct: 61 PTLTFRRSCREGICGSCAMNIDGINTLACTYGVEEVKGAVKIYPLPHMPVVKDLIPDLTH 120 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 FY+QH SI+PWL+T +P PAKE QS +DR K+DGLYEC+MCACCSTSCPSYWWN DRYL Sbjct: 121 FYAQHASIQPWLETETPAPAKEWKQSIDDRAKLDGLYECIMCACCSTSCPSYWWNGDRYL 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPA LL AYRWLIDSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKGLNPA AIA IK Sbjct: 181 GPAALLHAYRWLIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAAAIANIK 240 Query: 252 MMLLDRKI 259 M+++R + Sbjct: 241 KMMVERTV 248 >gi|229586280|ref|YP_002844781.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia africae ESF-5] gi|228021330|gb|ACP53038.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia africae ESF-5] Length = 261 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 204/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNDIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|157827942|ref|YP_001494184.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800423|gb|ABV75676.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii str. 'Sheila Smith'] Length = 261 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DG+YEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPIPSNSERLQSIKDREKLDGVYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|34580973|ref|ZP_00142453.1| succinate dehydrogenase iron-sulfur protein [Rickettsia sibirica 246] gi|28262358|gb|EAA25862.1| succinate dehydrogenase iron-sulfur protein [Rickettsia sibirica 246] Length = 261 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 169/258 (65%), Positives = 206/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIRIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL++LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEDLEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|165932630|ref|YP_001649419.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii str. Iowa] gi|165907717|gb|ABY72013.1| succinate dehydrogenase iron-sulfur protein [Rickettsia rickettsii str. Iowa] Length = 261 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DG+YEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPIPSNSERLQSIKDREKLDGVYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|67458528|ref|YP_246152.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia felis URRWXCal2] gi|75537005|sp|Q4UN71|DHSB_RICFE RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|67004061|gb|AAY60987.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia felis URRWXCal2] Length = 261 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 167/258 (64%), Positives = 204/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+GK ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGKEHKEQEEMLKPRKVKIYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K +++I G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCSMNIDGTNTLACIKPIEEISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS + R+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKGREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL++LEDP +LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDHTGERLEDLEDPSKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|238650511|ref|YP_002916363.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia peacockii str. Rustic] gi|238624609|gb|ACR47315.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia peacockii str. Rustic] Length = 261 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 168/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++P+ NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKEQGEMLKPRKIKIYRYDPNLDKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI KIK ++ +R Sbjct: 241 GLNPAKAIGKIKSLIAER 258 >gi|149913141|ref|ZP_01901675.1| succinate dehydrogenase catalytic subunit [Roseobacter sp. AzwK-3b] gi|149813547|gb|EDM73373.1| succinate dehydrogenase catalytic subunit [Roseobacter sp. AzwK-3b] Length = 249 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 172/249 (69%), Positives = 208/249 (83%), Gaps = 1/249 (0%) Query: 12 VKRGKIWNAPTGEKN-LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 + GK W P G +++++IYRWNPD+ NP +DTY+VD D+CGPMVLD L+YIK KI Sbjct: 1 MTTGKTWPKPEGAGKAVRKFQIYRWNPDDGANPRVDTYFVDTDDCGPMVLDALIYIKTKI 60 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 DPTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG + +YPLPHM V+KDL+ D++ Sbjct: 61 DPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLT 120 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 HFY+QH SI PWL+T + +PAKE QS EDR+K+DGLYECVMCA CSTSCPSYWWN D+Y Sbjct: 121 HFYAQHASIMPWLETKTNRPAKEWKQSIEDREKLDGLYECVMCASCSTSCPSYWWNGDKY 180 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA LL AYRW+IDSRDE GERLD+LEDPF+LYRCHTIMNCT++CPKGLNPAKAIA+I Sbjct: 181 LGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAEI 240 Query: 251 KMMLLDRKI 259 K M+++R + Sbjct: 241 KKMMVERAV 249 >gi|51473297|ref|YP_067054.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str. Wilmington] gi|81826336|sp|Q68XS0|DHSB_RICTY RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|51459609|gb|AAU03572.1| Fumarate dehydrogenase [Rickettsia typhi str. Wilmington] Length = 261 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 166/258 (64%), Positives = 207/258 (80%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LP S VK+G++ A ++ ++YR++PD NP +D++ +DL GPMVL Sbjct: 1 MVELRLPSNSVVKKGRVHKAQQEMLKPRKVQVYRYDPDLNKNPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLK +P E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYTQYESIEPWLKNDNPAPSNSERLQSIQDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD+YLGPAILLQAYRW+ DSRD+ G RL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAKAI ++K ++ +R Sbjct: 241 GLNPAKAIGRVKSLIAER 258 >gi|157803231|ref|YP_001491780.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia canadensis str. McKiel] gi|157784494|gb|ABV72995.1| succinate dehydrogenase catalytic subunit [Rickettsia canadensis str. McKiel] Length = 261 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 166/259 (64%), Positives = 205/259 (79%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S V++G+ ++ +IYR+NPD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVEKGREHKENEEMLRPRKIKIYRYNPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+ +DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPAPSNSERLQSIKDRENLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGPAILLQAYRW++DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPAILLQAYRWIVDSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 LNPAKAI +IK ++ +R+ Sbjct: 241 SLNPAKAIGEIKSLITERR 259 >gi|239946945|ref|ZP_04698698.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239921221|gb|EER21245.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 261 Score = 285 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 167/258 (64%), Positives = 203/258 (78%), Gaps = 1/258 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+G+ ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGREHKENEEMLKPRKIKIYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TLT RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT SP E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN D+YLGP ILLQAYRW+ DSRD+ GERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNGDKYLGPMILLQAYRWIADSRDDHNGERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDR 257 GLNPAK I KIK ++ +R Sbjct: 241 GLNPAKVIGKIKSLIAER 258 >gi|114328741|ref|YP_745898.1| succinate dehydrogenase iron-sulfur subunit [Granulibacter bethesdensis CGDNIH1] gi|114316915|gb|ABI62975.1| succinate dehydrogenase iron-sulfur protein [Granulibacter bethesdensis CGDNIH1] Length = 256 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 158/244 (64%), Positives = 196/244 (80%), Gaps = 1/244 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE LPK S++ +G+ + AP G +KE++IYRWNPD+ NP +DTY +DLD CGPMVL Sbjct: 1 MVEFALPKNSKIGKGRTFKAPAGATRVKEFKIYRWNPDDGNNPVVDTYEIDLDQCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN++D TL RRSCREGICGSC MNIDG NTLAC+K ++D+KGA V PLPHM+ Sbjct: 61 DALIKIKNEVDTTLAFRRSCREGICGSCAMNIDGGNTLACLKPIEDVKGACNVNPLPHMA 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTS 179 V++DL+ D++ Y+Q RSIEPWLK+ +P P E QS E+R ++DG++EC++C CC+TS Sbjct: 121 VVRDLIPDLTQAYAQLRSIEPWLKSDTPPPPDAERRQSREERAELDGMWECILCFCCTTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWN DRYLGPA LL AYRW+ DSRDE GERLD LEDPF+LYRCHTIMNC Q+CPK Sbjct: 181 CPSYWWNGDRYLGPATLLAAYRWIADSRDEATGERLDALEDPFKLYRCHTIMNCAQTCPK 240 Query: 240 GLNP 243 GLNP Sbjct: 241 GLNP 244 >gi|157825197|ref|YP_001492917.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia akari str. Hartford] gi|157799155|gb|ABV74409.1| succinate dehydrogenase catalytic subunit [Rickettsia akari str. Hartford] Length = 261 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 166/259 (64%), Positives = 203/259 (78%), Gaps = 1/259 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E+ LP S VK+GK + ++ +IYR++PD NP +D++ +DL GPMVL Sbjct: 1 MAELRLPPNSVVKKGKEYKEQEEMFKPRKVKIYRYDPDLDENPTIDSFEIDLSKTGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ IKN+ID TL RRSCREGICGSC MNIDGTNTLAC+K ++DI G I +YPLPHM Sbjct: 61 DALIKIKNEIDSTLAFRRSCREGICGSCSMNIDGTNTLACIKPIEDISGDIKIYPLPHMK 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV DMSHFY+Q+ SIEPWLKT E LQS +DR+K+DGLYEC++CACCSTS Sbjct: 121 VVKDLVPDMSHFYAQYESIEPWLKTDSHTPSNSERLQSIKDREKLDGLYECILCACCSTS 180 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPSYWWNSD+YLGPAILLQAYRW+ DSRD+ ERL+ LEDPF+LYRCHTIMNCT++CPK Sbjct: 181 CPSYWWNSDKYLGPAILLQAYRWIADSRDDNTCERLEALEDPFKLYRCHTIMNCTKTCPK 240 Query: 240 GLNPAKAIAKIKMMLLDRK 258 LNPAKAI KIK ++ +R+ Sbjct: 241 SLNPAKAIGKIKNLIAERR 259 >gi|254449931|ref|ZP_05063368.1| succinate dehydrogenase, iron-sulfur protein [Octadecabacter antarcticus 238] gi|198264337|gb|EDY88607.1| succinate dehydrogenase, iron-sulfur protein [Octadecabacter antarcticus 238] Length = 248 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 168/248 (67%), Positives = 203/248 (81%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID 71 + GK W P G NL++ +IYRW+PD+ NP +DTY+VD+D CGPMVLD L+ IK+ ID Sbjct: 1 MTTGKTWPKPEGATNLRKVQIYRWSPDDDKNPSLDTYFVDMDACGPMVLDALIKIKSDID 60 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 PTLT RRSCREGICGSC MNIDG NTLAC+ M +IKG I +YPLPHM VIKDL+ D++H Sbjct: 61 PTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLPHMPVIKDLIPDLTH 120 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 FY+QH S++PWL+T S KPAKE QS EDR K+DGLYECVMCACC+T+CPSYWWN DR+L Sbjct: 121 FYAQHASVKPWLETKSNKPAKEWKQSIEDRAKLDGLYECVMCACCTTACPSYWWNGDRFL 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPA LL A RW+ DSRDE GERLD+LEDPF+LYRCHTIMNC ++CPKGLNPA AIA +K Sbjct: 181 GPAALLTANRWITDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAAAIANVK 240 Query: 252 MMLLDRKI 259 M+++R + Sbjct: 241 KMMIERTV 248 >gi|289669024|ref|ZP_06490099.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 243 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 160/244 (65%), Positives = 195/244 (79%), Gaps = 3/244 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK S++ +G+ + A G KN + +++YRW+PD NP D+Y +DLD CGPMVL Sbjct: 1 MAEFTLPKNSKIGKGRHYPA-QGAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHM 119 D L+ IKN+IDPTL RRSCREGICGSC MNIDGTNTLAC K + K + +YPLPHM Sbjct: 60 DALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCST 178 SVIKDLV D++HFY+Q+ SI+PW++T +P P QS EDR+K+DGLYEC++CACCST Sbjct: 120 SVIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCST 179 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPSYWWN +RYLGPAILLQAYRW+IDSRDE G RLD+LEDPF+LYRCHTIMNC ++CP Sbjct: 180 SCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCP 239 Query: 239 KGLN 242 KGLN Sbjct: 240 KGLN 243 >gi|332285737|ref|YP_004417648.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7] gi|330429690|gb|AEC21024.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7] Length = 259 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 158/260 (60%), Positives = 204/260 (78%), Gaps = 2/260 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK SR+++G A G + + +R+YRW+P GNP +DTY D+ MVL Sbjct: 1 MAEFTLPKMSRIQKGNHHAALPGAEQVCSFRVYRWDPAVGGNPRVDTYEADVAGS-TMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHM 119 D LL IKN++DPTLTLRRSCREG+CGSC MNIDG NTLAC K + ++ ++VYPLPHM Sbjct: 60 DVLLKIKNEMDPTLTLRRSCREGVCGSCAMNIDGENTLACTKGLDELPHGAVSVYPLPHM 119 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++H Y+Q+ SI+PW++T S +E LQS EDR+K+DGLYEC++CACC+T+ Sbjct: 120 PVVKDLVSDLTHLYAQYGSIKPWMQTQSVPGTRERLQSPEDREKLDGLYECILCACCTTA 179 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPS WWN DR+LGP +LLQAYRW+ DSRDE GERLD+LEDPF+LYRCHTIMNCT +CPK Sbjct: 180 CPSSWWNPDRFLGPMVLLQAYRWIADSRDEATGERLDDLEDPFKLYRCHTIMNCTNTCPK 239 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 GLNPAKAI++IK ++++R + Sbjct: 240 GLNPAKAISEIKQLMINRTV 259 >gi|254796892|ref|YP_003081729.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Neorickettsia risticii str. Illinois] gi|254590128|gb|ACT69490.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Neorickettsia risticii str. Illinois] Length = 254 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 151/255 (59%), Positives = 195/255 (76%), Gaps = 3/255 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LP+ SRV GK+ N+P+ + +YR++P + NP D YYV+ +C PM+L Sbjct: 1 MAQFRLPENSRVVEGKVHNSPSSGAR--KLVVYRFSPGDD-NPRRDIYYVNEKDCSPMIL 57 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K+++DPTLT RRSCREG+CGSC MNIDG NTLAC K M +IKG I +YPLPHM Sbjct: 58 DALIKVKDEVDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLPHMR 117 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ F+ +RSI+PWL + KE LQ E+R+K+ GL++C++CACCSTSC Sbjct: 118 VLKDLVTDLTVFFQHYRSIKPWLHSEKSNDGKEHLQMPEEREKLTGLHDCILCACCSTSC 177 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PS+WWN D+YLGPA LLQAYRWL+DSRD + ERL+ L D FRLYRCHTIMNC Q+CPKG Sbjct: 178 PSFWWNGDKYLGPAALLQAYRWLVDSRDSKKKERLEFLTDSFRLYRCHTIMNCAQACPKG 237 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAIA+IK M++ Sbjct: 238 LNPAKAIAEIKKMIV 252 >gi|88608423|ref|YP_506417.1| succinate dehydrogenase iron-sulfur subunit [Neorickettsia sennetsu str. Miyayama] gi|88600592|gb|ABD46060.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Neorickettsia sennetsu str. Miyayama] Length = 254 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 151/255 (59%), Positives = 195/255 (76%), Gaps = 3/255 (1%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M + LP+ SR+ GK+ N+P+ + + +YR++P + NP D YYV+ +C PM+L Sbjct: 1 MAQFRLPENSRIVEGKVHNSPSSDAR--KLVVYRFSPGDD-NPRRDIYYVNQKDCAPMIL 57 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K +IDPTLT RRSCREG+CGSC MNIDG NTLAC K M +IKG I +YPLPHM Sbjct: 58 DALIKVKGEIDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLPHMR 117 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D++ F+ +RSI+PWL + KE LQ E+R+K+ GL++C++CACCSTSC Sbjct: 118 VLKDLVTDLTVFFQHYRSIKPWLHSEKSNNGKEHLQMPEEREKLAGLHDCILCACCSTSC 177 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PS+WWN D+YLGPA LLQAYRWL+DSRD + ERL+ L D FRLYRCHTIMNC Q+CPKG Sbjct: 178 PSFWWNGDKYLGPAALLQAYRWLVDSRDSKKKERLEFLADSFRLYRCHTIMNCAQACPKG 237 Query: 241 LNPAKAIAKIKMMLL 255 LNPAKAIA+IK M++ Sbjct: 238 LNPAKAIAEIKKMIV 252 >gi|304320534|ref|YP_003854177.1| Succinate dehydrogenase iron-sulfur protein [Parvularcula bermudensis HTCC2503] gi|303299436|gb|ADM09035.1| Succinate dehydrogenase iron-sulfur protein [Parvularcula bermudensis HTCC2503] Length = 265 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 139/267 (52%), Positives = 187/267 (70%), Gaps = 11/267 (4%) Query: 1 MVEIMLPKRSRVK-RGKIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGP 57 MVE+ LP+ S+V RGK + + ++ ++YR++PD NP +DTY +D+ Sbjct: 1 MVELTLPRNSKVNSRGKTFKGEPSGSDAQMRTVKVYRFDPDKDENPRLDTYILDV-AGIS 59 Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPL 116 MVLD L+ IK+++DPTL+ RRSCREG+CGSC NI+G N LAC+ + G I ++PL Sbjct: 60 MVLDLLIKIKDQLDPTLSFRRSCREGVCGSCAFNINGKNGLACITGLDELGSGDITIHPL 119 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 PH V+KDLV D+S FY QH ++P+L++ + + LQS EDR+++DGLYEC++CACC Sbjct: 120 PHQPVVKDLVTDLSKFYEQHAEVQPYLQSNNEPEKEH-LQSQEDREQLDGLYECILCACC 178 Query: 177 STSCPSYWWNSD-----RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 STSCPSYWWN + YLGPA LLQA+RW+ DSRD+ ERL L+D F+LYRCHTIM Sbjct: 179 STSCPSYWWNGNKDGEHEYLGPAALLQAHRWIKDSRDDKTAERLAALDDTFKLYRCHTIM 238 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NC CPK LNPA+AI +IK M +DR Sbjct: 239 NCVNVCPKNLNPAEAINEIKRMQIDRG 265 >gi|229366970|gb|ACQ58465.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Anoplopoma fimbria] Length = 281 Score = 272 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 159/251 (63%), Positives = 194/251 (77%), Gaps = 4/251 (1%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 V+ + AP E +K+++IYRW+PD G P M TY +DL+ CGPMVLD L+ IKN+I Sbjct: 24 VRHAQTAAAPAPESRIKKFQIYRWDPDTSGDKPRMQTYEIDLNTCGPMVLDALIKIKNEI 83 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 DPTLT RRSCREGICGSC MNI+G NTLAC K + +YPLPHM V+KDLV DM Sbjct: 84 DPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDM 143 Query: 130 SHFYSQHRSIEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S+FY+Q++SIEP+LK + ++ QS EDRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 144 SNFYAQYKSIEPYLKKKDGAQEGKEQYFQSVEDRQKLDGLYECILCACCSTSCPSYWWNG 203 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAI Sbjct: 204 DKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAI 263 Query: 248 AKIKMMLLDRK 258 A+IK M+ K Sbjct: 264 AEIKKMMATYK 274 >gi|225708162|gb|ACO09927.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Osmerus mordax] Length = 283 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 152/251 (60%), Positives = 194/251 (77%), Gaps = 4/251 (1%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 V+ + AP + +K++++YRW+PD P M TY +DL+ CGPMVLD L+ IKN++ Sbjct: 26 VRYAQTAAAPASQPRIKKFQVYRWDPDTTGDKPRMQTYEIDLNTCGPMVLDALIKIKNEM 85 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDM 129 D TLT RRSCREGICGSC MNI+G NTLAC+ + + +YPLPHM V+KDLV DM Sbjct: 86 DSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVSKIYPLPHMYVVKDLVPDM 145 Query: 130 SHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S+FY+Q++SIEP+LK + ++ LQ+ +DRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 146 SNFYAQYKSIEPYLKKKDEANEGKEQYLQTVDDRQKLDGLYECILCACCSTSCPSYWWNG 205 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAI Sbjct: 206 DKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAI 265 Query: 248 AKIKMMLLDRK 258 A+IK M+ K Sbjct: 266 AEIKKMMATYK 276 >gi|225703158|gb|ACO07425.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Oncorhynchus mykiss] gi|225704544|gb|ACO08118.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Oncorhynchus mykiss] Length = 289 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 158/251 (62%), Positives = 195/251 (77%), Gaps = 4/251 (1%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 V+ + AP E +K+++IYRW+PD P M TY +DL+NCGPMVLD L+ IKN++ Sbjct: 24 VRYAQTAAAPASEPRIKKFQIYRWDPDTMGDKPRMQTYEIDLNNCGPMVLDALIKIKNEM 83 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 DPTLT RRSCREGICGSC MNI+G NTLAC K + I +YPLPHM V+KDLV DM Sbjct: 84 DPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDINTSKPIKIYPLPHMYVVKDLVPDM 143 Query: 130 SHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S+FY+Q++SIEP+LK + ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 144 SNFYAQYKSIEPFLKKKDESQEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNG 203 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAI Sbjct: 204 DKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAI 263 Query: 248 AKIKMMLLDRK 258 A+IK M+ K Sbjct: 264 AEIKKMMATYK 274 >gi|297666268|ref|XP_002811455.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [Pongo abelii] Length = 280 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 151/246 (61%), Positives = 188/246 (76%), Gaps = 4/246 (1%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT Sbjct: 29 TQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLT 88 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYS 134 RRSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+ Sbjct: 89 FRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYA 148 Query: 135 QHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q++SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLG Sbjct: 149 QYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLG 208 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK Sbjct: 209 PAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKK 268 Query: 253 MLLDRK 258 M+ K Sbjct: 269 MMATYK 274 >gi|126328943|ref|XP_001376844.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 282 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 151/244 (61%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A T LK++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 33 TAATAAPRLKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDATLTFR 92 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM V+KDLV D+++FY+Q+ Sbjct: 93 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVMKDLVPDLNNFYAQY 152 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SI+P+LK + + LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 153 KSIQPYLKKKDESQEGKAQYLQSMEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 212 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 213 VLMQAYRWMIDSRDDFTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 272 Query: 255 LDRK 258 K Sbjct: 273 ATYK 276 >gi|115387094|ref|NP_002991.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Homo sapiens] gi|114554302|ref|XP_001155516.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial isoform 3 [Pan troglodytes] gi|114554304|ref|XP_001155457.1| PREDICTED: succinate dehydrogenase complex, subunit B, iron sulfur (Ip) isoform 2 [Pan troglodytes] gi|20455488|sp|P21912|DHSB_HUMAN RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|8979800|emb|CAB96822.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Homo sapiens] gi|14043765|gb|AAH07840.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Homo sapiens] gi|119615234|gb|EAW94828.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_a [Homo sapiens] gi|189065269|dbj|BAG34992.1| unnamed protein product [Homo sapiens] Length = 280 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 151/244 (61%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|124249440|ref|NP_001074344.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Gallus gallus] gi|82175585|sp|Q9YHT2|DHSB_CHICK RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|3851612|gb|AAC72372.1| succinate dehydrogenase Ip subunit [Gallus gallus] Length = 290 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 153/244 (62%), Positives = 186/244 (76%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 41 TAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFR 100 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + +YPLPHM V+KDLV D+S+FY+Q+ Sbjct: 101 RSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQY 160 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 161 KSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 220 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 221 VLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 280 Query: 255 LDRK 258 K Sbjct: 281 ATYK 284 >gi|57044796|ref|XP_535392.1| PREDICTED: similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) isoform 1 [Canis familiaris] Length = 280 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 152/244 (62%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|326932226|ref|XP_003212221.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like isoform 1 [Meleagris gallopavo] Length = 281 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 154/244 (63%), Positives = 187/244 (76%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 32 TAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFR 91 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + I +YPLPHM V+KDLV D+S+FY+Q+ Sbjct: 92 RSCREGICGSCAMNIAGGNTLACTKKIDPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQY 151 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 152 KSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 211 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 212 VLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 271 Query: 255 LDRK 258 K Sbjct: 272 ATYK 275 >gi|47222756|emb|CAG01723.1| unnamed protein product [Tetraodon nigroviridis] Length = 281 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 156/239 (65%), Positives = 189/239 (79%), Gaps = 4/239 (1%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E +K++++YRW+PD G P M TY +DL+ CGPMVLD L+ IKN+IDPTLT RRSCRE Sbjct: 36 EPRIKKFQVYRWDPDTPGDKPRMQTYEIDLNACGPMVLDALIKIKNEIDPTLTFRRSCRE 95 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI+G NTLAC K + +YPLPHM V+KDLV DMS+FY+Q++SIEP Sbjct: 96 GICGSCAMNINGGNTLACLNKIDPNTNKTTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEP 155 Query: 142 WLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +LK + K+ QS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QA Sbjct: 156 YLKKKDETREGKKQYFQSVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 216 YRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 274 >gi|209915614|ref|NP_001094009.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Rattus norvegicus] gi|205371749|sp|P21913|DHSB_RAT RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|149024457|gb|EDL80954.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_d [Rattus norvegicus] gi|165970950|gb|AAI58621.1| Sdhb protein [Rattus norvegicus] Length = 282 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 155/238 (65%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 39 PRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + G + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRDEF ERL L+DPF LYRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 219 RWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 276 >gi|665925|gb|AAA81167.1| succinate dehydrogenase iron-protein subunit [Homo sapiens] Length = 280 Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 151/244 (61%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|255308906|ref|NP_001157295.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Equus caballus] Length = 280 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 151/244 (61%), Positives = 187/244 (76%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|34328286|ref|NP_075863.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Mus musculus] gi|51701449|sp|Q9CQA3|DHSB_MOUSE RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|12834257|dbj|BAB22842.1| unnamed protein product [Mus musculus] gi|12844591|dbj|BAB26422.1| unnamed protein product [Mus musculus] gi|15488736|gb|AAH13509.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Mus musculus] gi|30354322|gb|AAH51934.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Mus musculus] gi|74141897|dbj|BAE41016.1| unnamed protein product [Mus musculus] gi|74225534|dbj|BAE31674.1| unnamed protein product [Mus musculus] gi|123265689|emb|CAM16753.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Mus musculus] gi|148681389|gb|EDL13336.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_f [Mus musculus] Length = 282 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 219 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 276 >gi|301777277|ref|XP_002924062.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [Ailuropoda melanoleuca] Length = 277 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 150/243 (61%), Positives = 188/243 (77%), Gaps = 4/243 (1%) Query: 17 IWNAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 + A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN++D TLT Sbjct: 26 VQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLT 85 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYS 134 RRSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+ Sbjct: 86 FRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYA 145 Query: 135 QHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q++SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLG Sbjct: 146 QYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLG 205 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK Sbjct: 206 PAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKK 265 Query: 253 MLL 255 M+ Sbjct: 266 MMA 268 >gi|308321504|gb|ADO27903.1| mitochondrial succinate dehydrogenase iron-sulfur subunit [Ictalurus furcatus] Length = 280 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 149/244 (61%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A + +K +RIYRW+PD G P M TY +DL+ CGPMVLD L+ IKN++D TLT R Sbjct: 30 TAAAAQPRIKTFRIYRWDPDKPGDKPHMQTYDIDLNTCGPMVLDALIKIKNEVDSTLTFR 89 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC+ + + +YPLPHM V+KDLV DM++FY+Q+ Sbjct: 90 RSCREGICGSCAMNINGGNTLACLNRIDTNTSKVSKIYPLPHMYVVKDLVPDMNNFYAQY 149 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + IEP+LK ++ LQS +DRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 150 KLIEPYLKRKDESQQGKQQYLQSVDDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 209 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW++DSRDE+ ERL L+DPF LYRCHTI+NCT++CPKGLNP KAIA+IK M+ Sbjct: 210 VLMQAYRWMVDSRDEYTEERLAKLQDPFSLYRCHTILNCTKTCPKGLNPGKAIAEIKKMM 269 Query: 255 LDRK 258 K Sbjct: 270 ATYK 273 >gi|148681388|gb|EDL13335.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_e [Mus musculus] Length = 280 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 37 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 96 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 97 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 156 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 157 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 216 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 217 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 274 >gi|12833468|dbj|BAB22534.1| unnamed protein product [Mus musculus] Length = 282 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PKIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 219 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 276 >gi|225707986|gb|ACO09839.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Osmerus mordax] Length = 281 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 154/239 (64%), Positives = 190/239 (79%), Gaps = 4/239 (1%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +K+++IYRW+PD P M TY +DL+NCGPMVLD L+ IKN++DPTLT RRSCRE Sbjct: 36 QPRIKKFQIYRWDPDTTGDKPRMQTYEIDLNNCGPMVLDALIKIKNEMDPTLTFRRSCRE 95 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI+G NTLAC K + A +YPLPHM V+KDLV DMS+FY+Q++SIEP Sbjct: 96 GICGSCAMNINGGNTLACLNKIDSNTSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEP 155 Query: 142 WLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +LK + ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QA Sbjct: 156 YLKKKDESQEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 216 YRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 274 >gi|94966775|ref|NP_001035573.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Bos taurus] gi|110808206|sp|Q3T189|DHSB_BOVIN RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=IP; Flags: Precursor gi|74267982|gb|AAI02068.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Bos taurus] gi|296489952|gb|DAA32065.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Bos taurus] Length = 280 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 153/238 (64%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 37 PRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREG 96 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 97 ICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 156 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 157 LKKKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 216 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF LYRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 217 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 274 >gi|108998301|ref|XP_001088349.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial isoform 2 [Macaca mulatta] gi|90086177|dbj|BAE91641.1| unnamed protein product [Macaca fascicularis] Length = 280 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 150/238 (63%), Positives = 187/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 37 PRIKKFAIYRWDPDKAGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 96 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 97 ICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 156 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 157 LKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 216 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 217 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 274 >gi|296206845|ref|XP_002750378.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [Callithrix jacchus] Length = 280 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 152/238 (63%), Positives = 186/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 37 PRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 96 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 97 ICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 156 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 157 LKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 216 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 217 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 274 >gi|317401835|gb|EFV82445.1| succinate dehydrogenase iron-sulfur protein [Achromobacter xylosoxidans C54] Length = 238 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 134/237 (56%), Positives = 178/237 (75%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD L+ IKN +D +L LRRSCRE Sbjct: 2 STKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDALVRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC +++++K I + PLP + VI+DL+VDM+HF++Q+ SI P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLRELKEPIVLRPLPGLPVIRDLIVDMTHFFNQYHSIRPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDTPPPEKERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|163856133|ref|YP_001630431.1| succinate dehydrogenase iron-sulfur subunit [Bordetella petrii DSM 12804] gi|163259861|emb|CAP42162.1| Succinate dehydrogenase iron-sulfur protein [Bordetella petrii] Length = 238 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 178/237 (75%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD ++ IKN +D +L LRRSCRE Sbjct: 2 STKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDAIIRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC +++++K I + PLP + VI+DL+VDM+HF++Q+ SI P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLRELKEPIVLKPLPGLPVIRDLIVDMTHFFNQYHSIRPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P +E LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDTPPPERERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L DSRDE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 LADSRDEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|332526161|ref|ZP_08402296.1| succinate dehydrogenase subunit B [Rubrivivax benzoatilyticus JA2] gi|332110001|gb|EGJ10629.1| succinate dehydrogenase subunit B [Rubrivivax benzoatilyticus JA2] Length = 234 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 130/233 (55%), Positives = 176/233 (75%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ ++IYR++PD P M T V+LD M+LD L+ +K +DP+L+ RRSCREG+CG Sbjct: 3 LRTFQIYRYDPDKDAKPYMQTLQVELDGSERMLLDALIKLKA-VDPSLSFRRSCREGVCG 61 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LAC+ +M+ + G + + PLP + VI+DL+VDM++F+ Q+ SI+P+L Sbjct: 62 SDAMNINGKNGLACLTNMRTLPGTVVLRPLPGLPVIRDLIVDMTNFFKQYHSIKPYLIND 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P E LQS E+R +++GLYEC++CA CST+CPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 ERPPETERLQSPEERDELNGLYECILCASCSTACPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ ERLDNLEDP+RLYRCHTIMNC CPKGLNP KAIAKIK M++ R I Sbjct: 182 RDQATSERLDNLEDPYRLYRCHTIMNCVDVCPKGLNPTKAIAKIKEMMVRRAI 234 >gi|157279735|ref|NP_001098423.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Sus scrofa] gi|122131481|sp|Q007T0|DHSB_PIG RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|115522027|gb|ABJ09403.1| succinate dehydrogenase complex subunit B [Sus scrofa] Length = 280 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 152/244 (62%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT +CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|73975689|ref|XP_850262.1| PREDICTED: similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) [Canis familiaris] Length = 280 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 150/244 (61%), Positives = 186/244 (76%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+D LYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDRLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F E L L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEEHLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|332021643|gb|EGI62002.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Acromyrmex echinatior] Length = 279 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 153/238 (64%), Positives = 184/238 (77%), Gaps = 4/238 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E LK + IYRWNPD P M Y VDL+ CGPMVLD L+ IKN+IDPTLT RRSC Sbjct: 26 NAEAKLKTFSIYRWNPDKPDEKPYMQKYKVDLNACGPMVLDALIKIKNEIDPTLTFRRSC 85 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI GTNTLAC K K + VYPLPHM ++KDLV D+++FY Q+R+I Sbjct: 86 REGICGSCAMNIGGTNTLACISKIDKSTSTSCEVYPLPHMYIVKDLVPDLNNFYDQYRNI 145 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +PWL+ K ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 146 QPWLQHKDTKETGNEQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLM 205 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QAYRW+IDSRD ERL+ L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 206 QAYRWIIDSRDTQAKERLEKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLLA 263 >gi|255002824|ref|ZP_05277788.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale str. Puerto Rico] Length = 245 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 155/241 (64%), Positives = 192/241 (79%), Gaps = 1/241 (0%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 N G + + ++IYRW+PD+ P +DT+Y+DLD CG MVLD L+ IKN++D TLT R Sbjct: 2 HNMAEGAQRVGCFKIYRWSPDDDEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFR 61 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGSC MNIDG+NTLAC K + DIKG + +YPLPHM+VIKDLV D+S FY+Q++ Sbjct: 62 RSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYK 121 Query: 138 SIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 S+ PWLK P E LQS EDR K+DG+Y+C++CA CSTSCPSYWWNSD+YLGPA+L Sbjct: 122 SVSPWLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVL 181 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 LQ YRWL DSRDE ERL+ L+D F+LYRCHTIMNCT++CPK LNPAKAI+KIK ++L Sbjct: 182 LQVYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLMLK 241 Query: 257 R 257 R Sbjct: 242 R 242 >gi|318904081|ref|NP_001187800.1| mitochondrial succinate dehydrogenase (ubiquinone) iron-sulfur subunit [Ictalurus punctatus] gi|308324003|gb|ADO29137.1| mitochondrial succinate dehydrogenase (ubiquinone) iron-sulfur subunit [Ictalurus punctatus] Length = 280 Score = 265 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 153/258 (59%), Positives = 193/258 (74%), Gaps = 8/258 (3%) Query: 5 MLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGL 63 LP +R + A + +K ++IYRW+PD G P M TY +DL+ CGPMVLD L Sbjct: 20 ALPASARYMQ----TAAAAQPRIKTFQIYRWDPDKPGDKPHMQTYDIDLNTCGPMVLDAL 75 Query: 64 LYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVI 122 + IKN++D TLT RRSCREGICGSC MNI+G NTLAC+ + + +YPLPHM V+ Sbjct: 76 IKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACLNRIDTNTSKVSKIYPLPHMYVV 135 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSC 180 KDLV DM++FY+Q++ IEP+LK ++ LQS +DRQK+DGLYECV+CACCSTSC Sbjct: 136 KDLVPDMNNFYAQYKLIEPYLKRKDESQQGKEQYLQSVDDRQKLDGLYECVLCACCSTSC 195 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN D+YLGPA+L+QAYRW++DSRDE+ ERL L+DPF LYRCHTI+NCT+SCPKG Sbjct: 196 PSYWWNGDKYLGPAVLMQAYRWMVDSRDEYTEERLAKLQDPFSLYRCHTILNCTKSCPKG 255 Query: 241 LNPAKAIAKIKMMLLDRK 258 LNP KAIA+IK M+ K Sbjct: 256 LNPGKAIAEIKKMMATYK 273 >gi|85544001|pdb|1YQ3|B Chain B, Avian Respiratory Complex Ii With Oxaloacetate And Ubiquinone gi|85544005|pdb|1YQ4|B Chain B, Avian Respiratory Complex Ii With 3-Nitropropionate And Ubiquinone gi|85544666|pdb|2FBW|B Chain B, Avian Respiratory Complex Ii With Carboxin Bound gi|85544670|pdb|2FBW|O Chain O, Avian Respiratory Complex Ii With Carboxin Bound gi|110590575|pdb|2H88|B Chain B, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom Resolution gi|110590579|pdb|2H88|O Chain O, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom Resolution gi|110590583|pdb|2H89|B Chain B, Avian Respiratory Complex Ii With Malonate Bound gi|304445605|pdb|2WQY|B Chain B, Remodelling Of Carboxin Binding To The Q-Site Of Avian Respiratory Complex Ii gi|304445609|pdb|2WQY|O Chain O, Remodelling Of Carboxin Binding To The Q-Site Of Avian Respiratory Complex Ii Length = 252 Score = 265 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 153/244 (62%), Positives = 186/244 (76%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 3 TAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFR 62 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + +YPLPHM V+KDLV D+S+FY+Q+ Sbjct: 63 RSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQY 122 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 123 KSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 182 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 183 VLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 242 Query: 255 LDRK 258 K Sbjct: 243 ATYK 246 >gi|293604093|ref|ZP_06686503.1| succinate dehydrogenase iron-sulfur subunit [Achromobacter piechaudii ATCC 43553] gi|292817517|gb|EFF76588.1| succinate dehydrogenase iron-sulfur subunit [Achromobacter piechaudii ATCC 43553] Length = 238 Score = 265 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 134/237 (56%), Positives = 178/237 (75%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD L+ IKN +D +L LRRSCRE Sbjct: 2 STKRIVKFEIYRYDPDKDERPYMQKLDVELQPTDKMLLDALVRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC +++++K I + PLP + VI+DL+VDM+HF++Q+ SI P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLRELKEPIVLRPLPGLPVIRDLIVDMTHFFNQYHSIRPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDAPPPEKERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|149926162|ref|ZP_01914424.1| succinate dehydrogenase iron-sulfur subunit [Limnobacter sp. MED105] gi|149824980|gb|EDM84192.1| succinate dehydrogenase iron-sulfur subunit [Limnobacter sp. MED105] Length = 238 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 179/237 (75%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 EK + + IYR++PD P M V+L+ M+LD L+ IK+ +D ++ RRSCRE Sbjct: 2 SEKRIVRFEIYRYDPDTGEAPKMQKLEVELEPTDKMLLDALMRIKSDVDESIAYRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC+ +++D+K I + PLP + V++DL+VDM+ F+ Q+ SI+P+ Sbjct: 62 GVCGSDAMNINGKNGLACITNLRDLKQPIVLKPLPGLPVVRDLIVDMTQFFKQYHSIKPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS E+R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LVNETPPPEKERLQSPEEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRD+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDQSTGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 238 >gi|114554306|ref|XP_001155328.1| PREDICTED: succinate dehydrogenase complex, subunit B, iron sulfur (Ip) isoform 1 [Pan troglodytes] gi|773300|gb|AAA80581.1| succinate dehydrogenase iron-protein subunit B [Homo sapiens] Length = 281 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 152/245 (62%), Positives = 189/245 (77%), Gaps = 5/245 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTL 76 A +K++ IYRW+PD P M TY VDL+N CGPMVLD L+ IKN++D TLT Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNNRCGPMVLDALIKIKNEVDSTLTF 90 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q Sbjct: 91 RRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQ 150 Query: 136 HRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGP Sbjct: 151 YKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGP 210 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M Sbjct: 211 AVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKM 270 Query: 254 LLDRK 258 + K Sbjct: 271 MATYK 275 >gi|255003956|ref|ZP_05278757.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale str. Virginia] Length = 242 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 154/237 (64%), Positives = 191/237 (80%), Gaps = 1/237 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 G + + ++IYRW+PD+ P +DT+Y+DLD CG MVLD L+ IKN++D TLT RRSCR Sbjct: 3 EGAQRVGCFKIYRWSPDDDEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFRRSCR 62 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG+NTLAC K + DIKG + +YPLPHM+VIKDLV D+S FY+Q++S+ P Sbjct: 63 EGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYKSVSP 122 Query: 142 WLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 WLK P E LQS EDR K+DG+Y+C++CA CSTSCPSYWWNSD+YLGPA+LLQ Y Sbjct: 123 WLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVLLQVY 182 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RWL DSRDE ERL+ L+D F+LYRCHTIMNCT++CPK LNPAKAI+KIK ++L R Sbjct: 183 RWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLMLKR 239 >gi|180917|gb|AAA35708.1| succinate-ubiquinone oxidoreductase Ip subunit precursor [Homo sapiens] gi|220070|dbj|BAA01089.1| succinate-ubiquinone oxidoreductase iron sulfur subunit [Homo sapiens] Length = 262 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 151/244 (61%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 13 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFR 72 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 73 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 132 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 133 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 192 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 193 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 252 Query: 255 LDRK 258 K Sbjct: 253 ATYK 256 >gi|312384972|gb|EFR29572.1| hypothetical protein AND_01318 [Anopheles darlingi] Length = 658 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 149/232 (64%), Positives = 182/232 (78%), Gaps = 7/232 (3%) Query: 30 YRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++IYRWNPD P TY VDL CGPMVLD L+ IKN++DPTLT RRSCREGICGSC Sbjct: 408 FQIYRWNPDQPEQKPYNQTYEVDLGACGPMVLDALIKIKNEMDPTLTFRRSCREGICGSC 467 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 MNI GTNTLAC+ + ++ +YPLPHM V+KDLV DM++FY+Q+RSI+PWL+ Sbjct: 468 AMNIGGTNTLACISKIDAGNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 527 Query: 147 SP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K + LQS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW Sbjct: 528 NETGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 587 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +IDSRDE RLD L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 588 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLL 639 >gi|195028564|ref|XP_001987146.1| GH21756 [Drosophila grimshawi] gi|193903146|gb|EDW02013.1| GH21756 [Drosophila grimshawi] Length = 296 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 148/252 (58%), Positives = 187/252 (74%), Gaps = 6/252 (2%) Query: 9 RSRVKRGKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIK 67 S + + +K++ IYRWNPDN P M TY +++ CGPMVLD L+ IK Sbjct: 27 NSSQLEQQAQPKESQAPQIKKFEIYRWNPDNAGEKPYMQTYEINMRECGPMVLDALIKIK 86 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLV 126 N++DPTLT RRSCREGICGSC MNI GTNTLAC K + VYPLPHM V++DLV Sbjct: 87 NEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLV 146 Query: 127 VDMSHFYSQHRSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DM++FY Q+++I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPS Sbjct: 147 PDMNNFYEQYKNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPS 206 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 YWWN+++YLGPA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLN Sbjct: 207 YWWNAEKYLGPAVLMQAYRWIIDSRDEMTVERLSKLKDPFSVYRCHTIMNCTRTCPKGLN 266 Query: 243 PAKAIAKIKMML 254 P +AIA+IK +L Sbjct: 267 PGRAIAEIKKLL 278 >gi|219127560|ref|XP_002184001.1| succinate dehydrogenase iron sulfur protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404724|gb|EEC44670.1| succinate dehydrogenase iron sulfur protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 273 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 151/240 (62%), Positives = 181/240 (75%), Gaps = 4/240 (1%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 P +K +++YRW+P+ P + TY VDL NCGPMVLD L+ IKN+ DPTLT RRSC Sbjct: 33 PKQAPRIKYFKVYRWDPEQSQKPYLSTYPVDLANCGPMVLDALIKIKNEQDPTLTFRRSC 92 Query: 81 REGICGSCGMNIDGTNTLACVK--DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 REGICGSC MNIDG NTLAC+ D KD A +YPLPHM VIKDLV DM +FY Q+RS Sbjct: 93 REGICGSCAMNIDGVNTLACLSYIDQKDTSSATKIYPLPHMYVIKDLVPDMGNFYEQYRS 152 Query: 139 IEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEPWL+ E LQ+ EDR K+DG+YEC++CACCST+CPSYWWN+D+YLGPA+L Sbjct: 153 IEPWLQPEKGKEPGQAEYLQTREDRAKLDGMYECILCACCSTACPSYWWNADKYLGPAVL 212 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 LQAYRW+ DSRD +RL+ L+D F+LYRCHTIMNCT+ CPK LNP KAIA+IK L D Sbjct: 213 LQAYRWIEDSRDGSTKKRLEELDDAFKLYRCHTIMNCTKVCPKHLNPGKAIAQIKKRLAD 272 >gi|72145768|ref|XP_794003.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115713382|ref|XP_001176257.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 281 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 149/236 (63%), Positives = 184/236 (77%), Gaps = 4/236 (1%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + LK + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCRE Sbjct: 36 AEKLKTFSIYRWDPDKEGDKPRMQTYDVDLNTCGPMVLDALIKIKNELDPTLTFRRSCRE 95 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI+GTNTLAC + + A +YPLPHM VIKDLV DM++FY+Q++SIEP Sbjct: 96 GICGSCSMNINGTNTLACISRIDRGSSKATKIYPLPHMYVIKDLVPDMNNFYAQYKSIEP 155 Query: 142 WLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +L+ K+ +QS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QA Sbjct: 156 YLQKKEDIKYGEKQFIQSIDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YRW+IDSRDE Q ERL L+D F +YRCHTIMNCT++CPKGLNP +AI +IK +L Sbjct: 216 YRWMIDSRDELQAERLAQLQDKFSVYRCHTIMNCTKTCPKGLNPGRAIGEIKKLLA 271 >gi|74146895|dbj|BAE41403.1| unnamed protein product [Mus musculus] Length = 282 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 150/238 (63%), Positives = 186/238 (78%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PRIKKFAIYRWDPDKTGDKTRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 219 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 276 >gi|332283676|ref|YP_004415587.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7] gi|330427629|gb|AEC18963.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7] Length = 238 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 178/237 (75%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +K + ++ IYR++PD P M V+L M+LD ++ IKN +D +L LRRSCRE Sbjct: 2 SQKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDAIIRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC ++ ++K I + PLP + V++DL+VDM+HF++Q+ SI+P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLLELKEPIVLKPLPGLPVVRDLIVDMTHFFNQYHSIKPF 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L P P KE LQ+ E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDQPPPEKERLQTPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE GERLDNLEDP+RL+RCHTIMNC CPKGLNP+ AI KIK ML+ R I Sbjct: 182 IADSRDEATGERLDNLEDPYRLFRCHTIMNCADVCPKGLNPSHAIGKIKEMLVRRAI 238 >gi|242025311|ref|XP_002433069.1| succinate dehydrogenase, iron-sulfur subunit [Pediculus humanus corporis] gi|212518585|gb|EEB20331.1| succinate dehydrogenase, iron-sulfur subunit [Pediculus humanus corporis] Length = 292 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 144/237 (60%), Positives = 181/237 (76%), Gaps = 4/237 (1%) Query: 21 PTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 K + IYRW+PD P M +Y VDL++CGPMVLD L+ IKN+IDPTLT RRS Sbjct: 37 KEKSPQYKTFSIYRWDPDAVNEKPRMQSYEVDLNSCGPMVLDALIKIKNEIDPTLTFRRS 96 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CREGICGSC MNI G NTLAC+ + G +YPLPHM V+KDLV DM++FY+Q++SI Sbjct: 97 CREGICGSCAMNIGGVNTLACISKISQ-SGTTKIYPLPHMYVVKDLVPDMTNFYNQYKSI 155 Query: 140 EPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +PWL+ + ++ LQS +DR +DGLYEC++CACCSTSCPSYWWN D+YLGPA L+ Sbjct: 156 QPWLQRKNEAEPGTEQYLQSVKDRDVLDGLYECILCACCSTSCPSYWWNGDKYLGPAALM 215 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QAYRW+IDSRD+ ERL NL+DPF ++RCHTIMNCT++CPK LNP KAIA++K +L Sbjct: 216 QAYRWIIDSRDDNTKERLSNLKDPFSVFRCHTIMNCTKTCPKSLNPGKAIAELKKLL 272 >gi|27882636|gb|AAH43859.1| Sdhb-prov protein [Xenopus laevis] Length = 282 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCREGI Sbjct: 40 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC + + +YPLPHM V+KDLV D+S+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 159 Query: 144 KTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K ++ LQS EDR K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L+QAYR Sbjct: 160 KKKDESQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMAMYK 276 >gi|195474201|ref|XP_002089380.1| GE19076 [Drosophila yakuba] gi|194175481|gb|EDW89092.1| GE19076 [Drosophila yakuba] Length = 297 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 151/242 (62%), Positives = 186/242 (76%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC+ + + VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 RNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|187477683|ref|YP_785707.1| succinate dehydrogenase iron-sulfur subunit [Bordetella avium 197N] gi|115422269|emb|CAJ48793.1| succinate dehydrogenase iron-sulfur protein [Bordetella avium 197N] Length = 238 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 131/237 (55%), Positives = 177/237 (74%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD L+ IKN +D +L LRRSCRE Sbjct: 2 SSKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDALVRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC +++++K I + PLP + VI+DL+VDM+HF++Q+ S+ P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLRELKEPIVLKPLPGLPVIRDLIVDMTHFFNQYHSVSPF 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P +E LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDTPPPERERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE G RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDEATGRRLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|194864004|ref|XP_001970722.1| GG23224 [Drosophila erecta] gi|190662589|gb|EDV59781.1| GG23224 [Drosophila erecta] Length = 297 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 151/242 (62%), Positives = 186/242 (76%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEDQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC+ + + VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 RNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|147899706|ref|NP_001080247.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Xenopus laevis] gi|123916423|sp|Q3B8J8|DHSB_XENLA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|77748119|gb|AAI06301.1| Sdhb-prov protein [Xenopus laevis] Length = 282 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCREGI Sbjct: 40 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC + + +YPLPHM V+KDLV D+S+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 159 Query: 144 KTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K ++ LQS EDR K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L+QAYR Sbjct: 160 KKKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMAMYK 276 >gi|322812259|pdb|3ABV|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide gi|322812267|pdb|3AE1|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide gi|322812271|pdb|3AE2|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide gi|322812275|pdb|3AE3|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Nitro-N-Phenyl-Benzamide gi|322812279|pdb|3AE4|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-Methyl-Benzamide gi|322812283|pdb|3AE5|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide gi|322812287|pdb|3AE6|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid gi|322812291|pdb|3AE7|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide gi|322812295|pdb|3AE8|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide gi|322812299|pdb|3AE9|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl- Benzamide gi|322812303|pdb|3AEA|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl- Benzamide gi|322812307|pdb|3AEB|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide gi|322812311|pdb|3AEC|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid gi|322812315|pdb|3AED|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-Phenyl-Benzamide gi|322812319|pdb|3AEE|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With Atpenin A5 gi|322812323|pdb|3AEF|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii With An Empty Quinone-Binding Pocket gi|322812327|pdb|3AEG|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide Length = 252 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 152/244 (62%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 3 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 62 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 63 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 122 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 123 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 182 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT +CPKGLNP KAIA+IK M+ Sbjct: 183 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMM 242 Query: 255 LDRK 258 K Sbjct: 243 ATYK 246 >gi|73535957|pdb|1ZOY|B Chain B, Crystal Structure Of Mitochondrial Respiratory Complex Ii From Porcine Heart At 2.4 Angstroms gi|73535961|pdb|1ZP0|B Chain B, Crystal Structure Of Mitochondrial Respiratory Complex Ii Bound With 3-Nitropropionate And 2-Thenoyltrifluoroacetone Length = 252 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 152/244 (62%), Positives = 188/244 (77%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 3 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 62 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 63 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 122 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 123 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 182 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT +CPKGLNP KAIA+IK M+ Sbjct: 183 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMM 242 Query: 255 LDRK 258 K Sbjct: 243 ATYK 246 >gi|311104832|ref|YP_003977685.1| succinate dehydrogenase iron-sulfur subunit [Achromobacter xylosoxidans A8] gi|310759521|gb|ADP14970.1| succinate dehydrogenase iron-sulfur subunit [Achromobacter xylosoxidans A8] Length = 238 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 177/237 (74%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD L+ IKN +D +L LRRSCRE Sbjct: 2 SNKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDALVRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC +++++K I + PLP + VI+DL+VDM+HF++Q+ SI P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLRELKEPIVLRPLPGLPVIRDLIVDMTHFFNQYHSIRPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDTPPPEKERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE G RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDEATGSRLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|307182148|gb|EFN69491.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Camponotus floridanus] Length = 278 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 152/238 (63%), Positives = 185/238 (77%), Gaps = 4/238 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E LK + IYRWNPD P M Y VDL+ CGPMVLD L+ IKN++DPTLT RRSC Sbjct: 27 NAEARLKTFSIYRWNPDKPDEKPYMQKYKVDLNTCGPMVLDALIKIKNEVDPTLTFRRSC 86 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI GTNTLAC K K+ + +YPLPHM ++KDLV D+++FY Q+RSI Sbjct: 87 REGICGSCAMNIQGTNTLACISKIDKNTSSSCDIYPLPHMYIVKDLVPDLNNFYEQYRSI 146 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +PWL+ K ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 147 QPWLQHKGIKKVGNQQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLM 206 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QAYRW+IDSRD ERL+ L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 207 QAYRWIIDSRDTQTNERLEKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLLA 264 >gi|17137106|ref|NP_477101.1| succinate dehydrogenase B [Drosophila melanogaster] gi|195581026|ref|XP_002080335.1| GD10425 [Drosophila simulans] gi|729335|sp|P21914|DHSB_DROME RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|508849|gb|AAA61925.1| succinate dehydrogenase iron-protein subunit [Drosophila melanogaster] gi|7302306|gb|AAF57396.1| succinate dehydrogenase B [Drosophila melanogaster] gi|21430210|gb|AAM50783.1| LD23740p [Drosophila melanogaster] gi|194192344|gb|EDX05920.1| GD10425 [Drosophila simulans] gi|220943896|gb|ACL84491.1| SdhB-PA [synthetic construct] gi|220953770|gb|ACL89428.1| SdhB-PA [synthetic construct] Length = 297 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 151/242 (62%), Positives = 187/242 (77%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC+ + + VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 RNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|322788410|gb|EFZ14081.1| hypothetical protein SINV_09801 [Solenopsis invicta] Length = 295 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 153/238 (64%), Positives = 185/238 (77%), Gaps = 4/238 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E LK + IYRWNPD P M Y VDL+ CGPMVLD L+ IKN+IDPTLT RRSC Sbjct: 42 NAEAKLKVFSIYRWNPDKPDEKPYMQKYKVDLNTCGPMVLDALIKIKNEIDPTLTFRRSC 101 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI GTNTLAC K K+ + VYPLPHM ++KDLV D+++FY Q+RSI Sbjct: 102 REGICGSCAMNIGGTNTLACISKIDKNTSTSCDVYPLPHMYIVKDLVPDLNNFYEQYRSI 161 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +PWL+ K ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 162 QPWLQHTDTKETGNQQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLM 221 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QAYRW+IDSRD ERL+ L+DPF ++RCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 222 QAYRWIIDSRDTRAKERLEKLKDPFSVFRCHTIMNCTRTCPKGLNPGKAIAEIKKLLA 279 >gi|195331927|ref|XP_002032650.1| GM20899 [Drosophila sechellia] gi|194124620|gb|EDW46663.1| GM20899 [Drosophila sechellia] Length = 297 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 151/242 (62%), Positives = 187/242 (77%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC+ + + VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 RNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|47229654|emb|CAG06850.1| unnamed protein product [Tetraodon nigroviridis] Length = 282 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 188/237 (79%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD G P M TY +DL+ CGPMVLD L+ IKN+ID TLT RRSCREGI Sbjct: 40 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNTCGPMVLDALIKIKNEIDSTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC K + +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ LQS +DRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDEADEGKEQYLQSVQDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|229367324|gb|ACQ58642.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Anoplopoma fimbria] Length = 283 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 151/237 (63%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD G P M TY +DL+ CGPMVLD L+ IKN++D TLT RR CREGI Sbjct: 40 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNTCGPMVLDALIKIKNEMDSTLTFRRFCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NT AC K +I +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTPACLNKIDTNISKPSKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ LQ+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDGTKEGKEQYLQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|33593352|ref|NP_880996.1| succinate dehydrogenase iron-sulfur subunit [Bordetella pertussis Tohama I] gi|33597752|ref|NP_885395.1| succinate dehydrogenase iron-sulfur subunit [Bordetella parapertussis 12822] gi|33602654|ref|NP_890214.1| succinate dehydrogenase iron-sulfur subunit [Bordetella bronchiseptica RB50] gi|33572708|emb|CAE42632.1| succinate dehydrogenase iron-sulfur protein [Bordetella pertussis Tohama I] gi|33574181|emb|CAE38512.1| succinate dehydrogenase iron-sulfur protein [Bordetella parapertussis] gi|33577096|emb|CAE35652.1| succinate dehydrogenase iron-sulfur protein [Bordetella bronchiseptica RB50] gi|332382761|gb|AEE67608.1| succinate dehydrogenase iron-sulfur subunit [Bordetella pertussis CS] Length = 238 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 176/237 (74%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 K + ++ IYR++PD P M V+L M+LD L+ IKN +D +L LRRSCRE Sbjct: 2 STKRIVKFEIYRYDPDKDERPYMQKLEVELQPTDKMLLDALVRIKNDVDDSLALRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC ++ ++K I + PLP + VI+DL+VDM+HF++Q+ SI P+ Sbjct: 62 GVCGSDAMNINGKNGLACTTNLLELKEPIVLKPLPGLPVIRDLIVDMTHFFNQYHSIRPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LINDTPPPEKERLQSPEAREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE G RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 IADSRDEATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 238 >gi|209733066|gb|ACI67402.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Salmo salar] Length = 283 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 150/237 (63%), Positives = 186/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD P M T+ +DL+ CGPMVLD L+ IKN++D TLT RRSCREGI Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC K + A +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDETNGGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|194758066|ref|XP_001961283.1| GF11072 [Drosophila ananassae] gi|190622581|gb|EDV38105.1| GF11072 [Drosophila ananassae] Length = 297 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 152/242 (62%), Positives = 187/242 (77%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAKEPQIKKFEIYRWNPDNAGEKPYMQTYDVDLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC K + ++ VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDTNTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 RNIQPWLQRKNEAVEEKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|67043769|gb|AAY63983.1| succinate dehydrogenase iron sulfur subunit B [Lysiphlebus testaceipes] Length = 279 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 183/237 (77%), Gaps = 4/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E LK + IYRWNPD P M Y VDL+ CGPMVLD L+ IKN+IDP+LT RRSC Sbjct: 25 NAEARLKTFSIYRWNPDKPDDKPTMQEYKVDLNKCGPMVLDALIKIKNEIDPSLTFRRSC 84 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI GTNTLAC K D +YPLPHM ++KDLV DMS+FY+Q++SI Sbjct: 85 REGICGSCAMNIGGTNTLACISKIDNDTSKKSKIYPLPHMYIVKDLVPDMSNFYAQYKSI 144 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +PWL+ K ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 145 QPWLQRDDNKKVGTQQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLM 204 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QAYRW+IDSRD +RLD L DPF +YRCHTIMNCT++CPKGLNP KAI++IK +L Sbjct: 205 QAYRWIIDSRDTKTTDRLDKLRDPFSVYRCHTIMNCTRTCPKGLNPGKAISEIKKLL 261 >gi|212536612|ref|XP_002148462.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Penicillium marneffei ATCC 18224] gi|210070861|gb|EEA24951.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Penicillium marneffei ATCC 18224] Length = 297 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 142/240 (59%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 AP+ K + +YRW+PD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 57 PAPSATPRTKTFHVYRWDPDTPSEKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR 116 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++HFY Q+ Sbjct: 117 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHFYKQY 176 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ S P+ E QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 177 KSIKPYLQRDSKPEDGLENRQSIEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 236 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRD+ ER L + +YRCHTI+NC+++CPKGLNP KAIA+IK ML Sbjct: 237 LLQSYRWLADSRDQKTEERKAALNNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMLA 296 >gi|297818328|ref|XP_002877047.1| succinate dehydrogenase 2-1 [Arabidopsis lyrata subsp. lyrata] gi|297322885|gb|EFH53306.1| succinate dehydrogenase 2-1 [Arabidopsis lyrata subsp. lyrata] Length = 279 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 149/231 (64%), Positives = 184/231 (79%), Gaps = 2/231 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y VDL +CGPMVLD L+ IKN++DP+LT RRSCREGI Sbjct: 47 SNLKTFQIYRWNPDNPGKPELKDYQVDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ ++D + PLPHM VIKDLVVDM++FY+Q++SIEPWLK Sbjct: 107 CGSCAMNIDGCNGLACLTKIEDGSSGTTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 166 Query: 145 TVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +P PAKE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K IA IK + Sbjct: 227 ISDSRDEYTKERLEAVDDEFKLYRCHTILNCARACPKGLNPGKQIAHIKQL 277 >gi|213515560|ref|NP_001135166.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Salmo salar] gi|197632253|gb|ACH70850.1| succinate dehydrogenase complex, subunit B iron sulfur [Salmo salar] gi|223646776|gb|ACN10146.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Salmo salar] gi|223672631|gb|ACN12497.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Salmo salar] Length = 283 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 150/237 (63%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD P M T+ +DL+ CGPMVLD L+ IKN++D TLT RRSCREGI Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC K + A +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|187608308|ref|NP_001120000.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Xenopus (Silurana) tropicalis] gi|205831551|sp|B0BM36|DHSB_XENTR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|165971096|gb|AAI58271.1| sdhb protein [Xenopus (Silurana) tropicalis] Length = 284 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 150/237 (63%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++ IYRW+PD G P M TY VDL+ CG MVLD L+ IKN++DPTLT RRSCREGI Sbjct: 42 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGI 101 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC + + +YPLPHM V+KDLV D+S+FY+Q++SIEP+L Sbjct: 102 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 161 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ LQS EDR K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L+QAYR Sbjct: 162 KKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 221 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRD++ ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 222 WMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 278 >gi|195436172|ref|XP_002066043.1| GK22142 [Drosophila willistoni] gi|194162128|gb|EDW77029.1| GK22142 [Drosophila willistoni] Length = 297 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 150/242 (61%), Positives = 184/242 (76%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY V+L CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAKEPQIKKFEIYRWNPDNAGEKPYMQTYEVNLRECGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC K + ++ VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGTNTLACISKIDTNASKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+I+PWL+ + + LQS EDR K+DGLYEC++CACCSTSCPSYWWN ++YLG Sbjct: 158 RNIQPWLQRKDEAGEQKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNPEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLGKLRDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 ML 254 +L Sbjct: 278 LL 279 >gi|225714060|gb|ACO12876.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Lepeophtheirus salmonis] gi|290561026|gb|ADD37915.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial [Lepeophtheirus salmonis] Length = 301 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 150/235 (63%), Positives = 181/235 (77%), Gaps = 6/235 (2%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + IYRWNPDN P + Y V+L +CGPMVLD L+ IKN+IDPTLT RRSCREGI Sbjct: 45 KVKTFAIYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDALIKIKNEIDPTLTFRRSCREGI 104 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC+ + I +YPLPHM V+KDLV DM++FY Q+RSI+PWL Sbjct: 105 CGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWL 164 Query: 144 KTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + ++LQS EDR K+DGLYEC++CACCSTSCPSYWWN DRYLGPA+L+QA Sbjct: 165 QREDESSTSEGNLQILQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQA 224 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD ER+D L DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 225 YRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCPKGLNPGKAIAEIKKLL 279 >gi|291415330|ref|XP_002723906.1| PREDICTED: succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Oryctolagus cuniculus] Length = 280 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 150/244 (61%), Positives = 184/244 (75%), Gaps = 4/244 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPRMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS E+R+K+DGLYEC+ CACCSTSCPSYW N D+YLGP Sbjct: 151 KSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECIFCACCSTSCPSYWXNGDKYLGPP 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270 Query: 255 LDRK 258 K Sbjct: 271 ATYK 274 >gi|121605926|ref|YP_983255.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Polaromonas naphthalenivorans CJ2] gi|120594895|gb|ABM38334.1| succinate dehydrogenase subunit B [Polaromonas naphthalenivorans CJ2] Length = 234 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 131/232 (56%), Positives = 173/232 (74%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD L+ +K DPT++ RRSCREG+CGS Sbjct: 4 RTFQIYRYDPDTDAKPYMQTIEVELDGHERMLLDALMKLKA-QDPTISFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + V++DL VDM+ F+ Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNMNTLKGTIVLKPLPGLPVVRDLFVDMTQFFKQYNSIKPYLINNN 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR+L DSR Sbjct: 123 VPPQTERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPKGLNPAKAI KIK M++ R + Sbjct: 183 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPAKAIGKIKEMMVLRTV 234 >gi|322709210|gb|EFZ00786.1| succinate dehydrogenase iron-sulfur protein [Metarhizium anisopliae ARSEF 23] Length = 314 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 143/237 (60%), Positives = 180/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 N+K ++IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT RRSC Sbjct: 39 EKASNMKTFQIYRWNPDTPTEKPRMQSYTIDLNKTGPMILDALVRIKNELDPTLTFRRSC 98 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+G NTLAC + + + +YPLPH V+KDLV D+++FY Q++SI Sbjct: 99 REGICGSCAMNINGQNTLACLCRIPAESSSDVKLYPLPHTYVVKDLVPDLTYFYKQYKSI 158 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ +P KE QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ Sbjct: 159 KPYLQRDTPAPDGKEYRQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQ 218 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +YRWL DSRDE ER NLE+ LYRCHTI+NCT++CPKGLNP KAIA+IK + Sbjct: 219 SYRWLADSRDERSAERRANLENNMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 275 >gi|296136774|ref|YP_003644016.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thiomonas intermedia K12] gi|294340930|emb|CAZ89325.1| Succinate dehydrogenase iron-sulfur protein [Thiomonas sp. 3As] gi|295796896|gb|ADG31686.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thiomonas intermedia K12] Length = 238 Score = 262 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 125/237 (52%), Positives = 175/237 (73%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + ++ IYR++PD P M Y V L + M+LD + IK ++D +L++RRSCRE Sbjct: 2 NDTRKMKFSIYRYDPDKDAKPYMQDYEVTLQHTDKMLLDAIQRIKWELDDSLSIRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+CGS MNI+G N LAC+ ++ +K + + PLP + VI+DL+VDM+ F++Q+ SI+P+ Sbjct: 62 GVCGSDAMNINGKNGLACITNLLTLKEPVVLKPLPGLPVIRDLIVDMTQFFNQYHSIKPY 121 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L +P P KE LQS +R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR+ Sbjct: 122 LVNNTPPPEKERLQSPAEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRF 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSRDE GERLDNLEDP+RL+RCHTIMNC CPK LNP AI+KIK M++ R + Sbjct: 182 IADSRDEATGERLDNLEDPYRLFRCHTIMNCVDVCPKELNPTLAISKIKEMMVRRAV 238 >gi|91789454|ref|YP_550406.1| succinate dehydrogenase subunit B [Polaromonas sp. JS666] gi|91698679|gb|ABE45508.1| succinate dehydrogenase subunit B [Polaromonas sp. JS666] Length = 234 Score = 262 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD L+ +K DP+++ RRSCREG+CGS Sbjct: 4 RTFQIYRYDPDTDAKPYMQTIEVELDGSERMLLDALMKLKA-QDPSISFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+ + G I + PLP + V++DL+VDM+ F+ Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNMRTLPGTIVLKPLPGLPVVRDLIVDMTQFFKQYNSIKPYLINDN 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 VPPEKERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK M++ R + Sbjct: 183 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKEMMVLRAV 234 >gi|260790799|ref|XP_002590428.1| hypothetical protein BRAFLDRAFT_273662 [Branchiostoma floridae] gi|229275622|gb|EEN46439.1| hypothetical protein BRAFLDRAFT_273662 [Branchiostoma floridae] Length = 278 Score = 262 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 153/239 (64%), Positives = 190/239 (79%), Gaps = 4/239 (1%) Query: 21 PTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 P + LK+++IYRW+PD P M Y VDL+NCGPMVLD L+ IKN+IDPTLT RRS Sbjct: 37 PQEQPRLKKFKIYRWDPDKMGDKPRMQEYSVDLNNCGPMVLDALIKIKNEIDPTLTFRRS 96 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNI GTNTLAC+ + +YPLPHM V+KDLV DMS+FY+Q+RS Sbjct: 97 CREGICGSCAMNIGGTNTLACISRIDTKLSKATKIYPLPHMYVVKDLVPDMSNFYAQYRS 156 Query: 139 IEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEP+LK + ++L QS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L Sbjct: 157 IEPYLKRKDGIQQGEEQLFQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVL 216 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRD+F+ ERL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK M+ Sbjct: 217 MQAYRWMIDSRDQFRKERLEKLQDPFSVYRCHTIMNCTKTCPKGLNPGRAIAEIKKMMA 275 >gi|225704794|gb|ACO08243.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Oncorhynchus mykiss] Length = 283 Score = 262 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 150/237 (63%), Positives = 187/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD P M T+ +DL+ CGPMVLD L+ IKN++D TLT RRSCREGI Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFDIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC K + A +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|120610875|ref|YP_970553.1| succinate dehydrogenase subunit B [Acidovorax citrulli AAC00-1] gi|120589339|gb|ABM32779.1| succinate dehydrogenase subunit B [Acidovorax citrulli AAC00-1] Length = 233 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T ++LD M+LD L+ +K DP+++ RRSCREG+CGS Sbjct: 3 RTFQIYRYDPDKDAKPYMQTVEIELDGHERMLLDALIKLKA-QDPSISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L T Sbjct: 62 DAMNINGKNGLACLTNMNTLKGTIVLKPLPGLPVIRDLIVDMTQFFKQYHSIKPYLITEG 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P +E LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 IAPERERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE G RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DEATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|242796239|ref|XP_002482757.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Talaromyces stipitatus ATCC 10500] gi|218719345|gb|EED18765.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Talaromyces stipitatus ATCC 10500] Length = 297 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 139/240 (57%), Positives = 177/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 AP+ K + +YRW+PD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 57 PAPSATPRTKTFHVYRWDPDTPSEKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR 116 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++HFY Q+ Sbjct: 117 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHFYKQY 176 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 177 KSIKPYLQRDTKTEDGLENRQSIEERRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 236 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L + +YRCHTI+NC+++CPKGLNP KAIA+IK M+ Sbjct: 237 LLQSYRWLADSRDEKTEERKAALNNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMA 296 >gi|225719282|gb|ACO15487.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Caligus clemensi] Length = 298 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 153/233 (65%), Positives = 182/233 (78%), Gaps = 4/233 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + IYRWNPDN P + Y V+L++CGPMVLD LL IKN++DPTLT RRSCREGI Sbjct: 44 KVKTFAIYRWNPDNPGEKPRLQEYKVNLNDCGPMVLDALLKIKNEMDPTLTFRRSCREGI 103 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC K + AI +YPLPHM V+KDLV DM++FY QHRSI+PWL Sbjct: 104 CGSCSMNIGGVNTLACINKVDPNPNKAIKIYPLPHMYVVKDLVPDMNNFYEQHRSIQPWL 163 Query: 144 K--TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + ++LQS EDR K+DGLYEC++CACCSTSCPSYWWN DRYLGPA+L+QAYR Sbjct: 164 QRENEDTSGNNQILQSVEDRSKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQAYR 223 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W+IDSRD ER+D L DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 224 WMIDSRDNATNERMDKLRDPFSVYRCHTIMNCTKTCPKGLNPGKAIAEIKKLL 276 >gi|297805608|ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata] gi|297316524|gb|EFH46947.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata] Length = 280 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 2/233 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 G +LK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCRE Sbjct: 44 GGASLKTFQIYRWNPDNPGKPELQDYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCRE 103 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG N LAC+ ++ + PLPHM VIKDLVVDM++FY+Q++SIEPW Sbjct: 104 GICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 163 Query: 143 LKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK +P P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 164 LKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW+ DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 224 RWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276 >gi|148922926|ref|NP_001092210.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor [Danio rerio] gi|206558175|sp|A5PL98|DHSB_DANRE RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|148745148|gb|AAI42800.1| Sdhb protein [Danio rerio] Length = 280 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 150/237 (63%), Positives = 189/237 (79%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K+++IYRW+PD P M TY +DL+ CGPMVLD L+ IKN++D TLT RRSCREGI Sbjct: 37 RIKKFQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGI 96 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC+ + + +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 97 CGSCAMNINGGNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 156 Query: 144 KTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K ++ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L+QAYR Sbjct: 157 KKKDESQQGKQQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 216 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRD+F +RL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M++ K Sbjct: 217 WMIDSRDDFTEDRLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMVTYK 273 >gi|15237464|ref|NP_198881.1| SDH2-2; electron carrier/ succinate dehydrogenase [Arabidopsis thaliana] gi|110808205|sp|Q8LB02|DHSB2_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|9758093|dbj|BAB08537.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|18377692|gb|AAL66996.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|21689851|gb|AAM67569.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|332007195|gb|AED94578.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2 [Arabidopsis thaliana] Length = 280 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 2/233 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 G +LK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCRE Sbjct: 44 GGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCRE 103 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG N LAC+ ++ + PLPHM VIKDLVVDM++FY+Q++SIEPW Sbjct: 104 GICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 163 Query: 143 LKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK +P P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 164 LKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW+ DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 224 RWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276 >gi|326317740|ref|YP_004235412.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374576|gb|ADX46845.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 233 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 129/232 (55%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T ++LD M+LD L+ +K DP+++ RRSCREG+CGS Sbjct: 3 RTFQIYRYDPDKDAKPYMQTVEIELDGHERMLLDALVKLKA-QDPSISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L T Sbjct: 62 DAMNINGKNGLACLTNMNTLKGTIVLKPLPGLPVIRDLIVDMTQFFKQYHSIKPYLITEG 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 ITPEKERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE G RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DEATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|310942109|dbj|BAJ24098.1| succinate dehydrogenase iron-sulphur protein [Helicobasidium mompa] Length = 291 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 146/238 (61%), Positives = 180/238 (75%), Gaps = 2/238 (0%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + +K + IYRWNPD P + Y +D++ CGPMVLD L+ IKN++DPTLT RR Sbjct: 47 GASKPPAIKTFSIYRWNPDEPAVKPKLQKYDIDMNKCGPMVLDALIKIKNEVDPTLTFRR 106 Query: 79 SCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNIDG NTLAC+K K+ + +YPLPHM VIKDLV DM+ FY Q++ Sbjct: 107 SCREGICGSCAMNIDGVNTLACLKRIPKESGPDVKIYPLPHMYVIKDLVPDMTLFYKQYK 166 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 SIEP+LK S +E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA+L+ Sbjct: 167 SIEPYLKNDSVPENREFLQSQEDRKKLDGMYECILCACCSTSCPSYWWNQDTYLGPAVLM 226 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QAYRW+ DSRD + ER + L++ F LYRCHTI NCT++CPKGLNPAKAIA IK + Sbjct: 227 QAYRWIADSRDSYGEERKEKLQNTFSLYRCHTIFNCTKTCPKGLNPAKAIAHIKREMA 284 >gi|12049600|emb|CAC19856.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Arabidopsis thaliana] Length = 280 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 2/233 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 G +LK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCRE Sbjct: 44 GGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCRE 103 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG N LAC+ ++ + PLPHM VIKDLVVDM++FY+Q++SIEPW Sbjct: 104 GICGSCAMNIDGCNGLACLTKIEFGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 163 Query: 143 LKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK +P P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 164 LKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW+ DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 224 RWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276 >gi|125806762|ref|XP_001360158.1| GA17170 [Drosophila pseudoobscura pseudoobscura] gi|195149159|ref|XP_002015525.1| GL11120 [Drosophila persimilis] gi|54635329|gb|EAL24732.1| GA17170 [Drosophila pseudoobscura pseudoobscura] gi|194109372|gb|EDW31415.1| GL11120 [Drosophila persimilis] Length = 297 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 148/243 (60%), Positives = 187/243 (76%), Gaps = 6/243 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRW+PDN P M TY V+L +CGPMVLD L+ IKN++DPTLT R Sbjct: 38 PKEAKEPQIKKFEIYRWSPDNAGEKPHMQTYEVNLRDCGPMVLDALIKIKNEMDPTLTFR 97 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + ++ VYPLPHM V++DLV DM++FY Q+ Sbjct: 98 RSCREGICGSCAMNIGGINTLACISKIDTNTSKSLKVYPLPHMYVVRDLVPDMNNFYEQY 157 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 158 KNIQPWLQRKNEAGEKKGRAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 217 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 218 PAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 277 Query: 253 MLL 255 +L Sbjct: 278 LLA 280 >gi|283046834|ref|NP_001164360.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Tribolium castaneum] gi|270014261|gb|EFA10709.1| hypothetical protein TcasGA2_TC011988 [Tribolium castaneum] Length = 283 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 148/234 (63%), Positives = 182/234 (77%), Gaps = 5/234 (2%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 K++ IYRWNPD P + Y VDL+ CGPMVLD L+ IKN++DPTLT RRSCREGI Sbjct: 32 REKKFAIYRWNPDQPDKKPWVQEYKVDLNACGPMVLDALIKIKNEMDPTLTFRRSCREGI 91 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC K + +YPLPHM V+KDLV DM++FY Q++SI+PWL Sbjct: 92 CGSCAMNIGGVNTLACICKIDTSLDKPTKIYPLPHMYVVKDLVPDMTNFYKQYKSIQPWL 151 Query: 144 KTVSPKP---AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + K ++ LQS +DRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 152 QRKDEKKSGEHQQYLQSMDDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 211 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RW+IDSRD+ ERLD L+DPF +YRCHTI+NCT++CPKGLNP KAIA+IK +L Sbjct: 212 RWIIDSRDDATAERLDKLKDPFSVYRCHTILNCTKTCPKGLNPGKAIAEIKKLL 265 >gi|209522565|ref|ZP_03271142.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. H160] gi|295700758|ref|YP_003608651.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1002] gi|209497001|gb|EDZ97279.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. H160] gi|295439971|gb|ADG19140.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1002] Length = 234 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|239814434|ref|YP_002943344.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus S110] gi|239801011|gb|ACS18078.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus S110] Length = 233 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 130/232 (56%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T ++LD M+LD L+ +K DPTL+ RRSCREG+CGS Sbjct: 3 RTFQIYRYDPDKDAKPYMQTVEIELDGHERMLLDALMKLKA-QDPTLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L+ + Sbjct: 62 DAMNINGKNGLACLTNMLTLKGTIVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLQNDN 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 VPPEKERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPK LNP KAI KIK +++ R I Sbjct: 182 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKNLNPTKAIGKIKELMVRRAI 233 >gi|15232149|ref|NP_189374.1| SDH2-1; electron carrier/ succinate dehydrogenase [Arabidopsis thaliana] gi|186510498|ref|NP_001118718.1| SDH2-1; electron carrier/ succinate dehydrogenase [Arabidopsis thaliana] gi|110808204|sp|Q8LBZ7|DHSB1_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|7939510|dbj|BAA95713.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|14334680|gb|AAK59518.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|17104677|gb|AAL34227.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|60547777|gb|AAX23852.1| hypothetical protein At3g27370 [Arabidopsis thaliana] gi|332643788|gb|AEE77309.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1 [Arabidopsis thaliana] gi|332643789|gb|AEE77310.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1 [Arabidopsis thaliana] Length = 279 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 147/231 (63%), Positives = 183/231 (79%), Gaps = 2/231 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCREGI Sbjct: 47 SNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ ++D + PLPHM VIKDLVVDM++FY+Q++SIEPWLK Sbjct: 107 CGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 166 Query: 145 TVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +P PAKE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 227 ISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277 >gi|21593098|gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like [Arabidopsis thaliana] Length = 280 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 2/233 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 G +LK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCRE Sbjct: 44 GGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCRE 103 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG N LAC+ ++ + PLPHM VIKDLVVDM++FY+Q++SIEPW Sbjct: 104 GICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 163 Query: 143 LKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK +P P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 164 LKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW+ DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 224 RWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276 >gi|12049598|emb|CAC19855.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Arabidopsis thaliana] Length = 279 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 147/231 (63%), Positives = 183/231 (79%), Gaps = 2/231 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCREGI Sbjct: 47 SNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ ++D + PLPHM VIKDLVVDM++FY+Q++SIEPWLK Sbjct: 107 CGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 166 Query: 145 TVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +P PAKE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 227 ISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277 >gi|289742779|gb|ADD20137.1| succinate dehydrogenase Fe-s protein subunit [Glossina morsitans morsitans] Length = 297 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 147/241 (60%), Positives = 186/241 (77%), Gaps = 6/241 (2%) Query: 20 APTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 +K ++IYRWNP+N P M TY V+L CGPMVLD L+ IKN++D TLT RR Sbjct: 39 KEAPAPQMKTFQIYRWNPENAGEKPFMQTYEVNLRECGPMVLDALIKIKNEVDATLTFRR 98 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI GTNTLAC K ++ + +YPLPHM V++DLV DM++FY Q+R Sbjct: 99 SCREGICGSCAMNIGGTNTLACISKIDTNLSKPLKIYPLPHMYVVRDLVPDMNNFYEQYR 158 Query: 138 SIEPWLKTVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 SI+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLGP Sbjct: 159 SIQPWLQRKNEATEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGP 218 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A+L+QAYRW+IDSRDE +RL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK + Sbjct: 219 AVLMQAYRWIIDSRDESTEQRLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 278 Query: 254 L 254 L Sbjct: 279 L 279 >gi|332528251|ref|ZP_08404256.1| succinate dehydrogenase subunit B [Hylemonella gracilis ATCC 19624] gi|332042271|gb|EGI78592.1| succinate dehydrogenase subunit B [Hylemonella gracilis ATCC 19624] Length = 234 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M T ++L+ M+LD L+ +K +DPTL+ RRSCREG+CGS Sbjct: 4 RTFSIYRYDPDKDAKPYMQTIEIELEGNERMLLDALVKLKA-VDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++K +KG I + PLP + V++DL+VDM+ F++Q+ SI+P+L Sbjct: 63 DAMNINGKNGLACLTNLKTLKGTIVLKPLPGLPVVRDLIVDMTQFFTQYHSIKPYLVNEQ 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 VPPEKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK M++ R + Sbjct: 183 DQATAERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKEMMVARSV 234 >gi|195120964|ref|XP_002004991.1| GI19303 [Drosophila mojavensis] gi|193910059|gb|EDW08926.1| GI19303 [Drosophila mojavensis] Length = 296 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 148/242 (61%), Positives = 185/242 (76%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRWNPDN P M TY +++ CGPMVLD L+ IKN++DPTLT R Sbjct: 37 PKAAQEPQIKKFEIYRWNPDNAGEKPYMQTYEINMRECGPMVLDALIKIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC K + VYPLPHM V++DLV DM++FY Q+ Sbjct: 97 RSCREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPDMNNFYEQY 156 Query: 137 RSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++I+PWL+ + K + LQS EDR K+DGLYEC++CACCSTSCPSYWWN+++YLG Sbjct: 157 KNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLG 216 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 217 PAVLMQAYRWIIDSRDENSVERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 276 Query: 253 ML 254 +L Sbjct: 277 LL 278 >gi|321468348|gb|EFX79333.1| hypothetical protein DAPPUDRAFT_231048 [Daphnia pulex] Length = 281 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 147/234 (62%), Positives = 186/234 (79%), Gaps = 4/234 (1%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ +YRWNPD G P + TY VDL+ CGPMVLD L+ IK+++DPTLT RRSCREG Sbjct: 33 PRIKKFAVYRWNPDVSGDKPHLQTYEVDLNTCGPMVLDALIKIKSEMDPTLTFRRSCREG 92 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G N+LAC K ++ + ++PLPHM V+KDLV DMS+FY+Q++SI+PW Sbjct: 93 ICGSCAMNIGGCNSLACISKIDTNLDKPVKIHPLPHMYVVKDLVPDMSNFYAQYKSIQPW 152 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L+ K+ LQS +DRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 153 LQRKDESKLGQKQYLQSVDDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 212 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RW+IDSRDE +RLD L DPF ++RCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 213 RWMIDSRDEATKDRLDRLRDPFSVFRCHTIMNCTKACPKGLNPGKAIAEIKKLL 266 >gi|195383546|ref|XP_002050487.1| GJ22180 [Drosophila virilis] gi|194145284|gb|EDW61680.1| GJ22180 [Drosophila virilis] Length = 296 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 146/242 (60%), Positives = 184/242 (76%), Gaps = 6/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +K++ IYRW+PDN P M TY V++ CGPMVLD L+ IKN+IDPTLT R Sbjct: 37 PKAAQEPQIKKFEIYRWSPDNAGEKPHMQTYEVNMRECGPMVLDALIKIKNEIDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + VYPLPHM V++DLV DM++FY Q+ Sbjct: 97 RSCREGICGSCAMNIGGVNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPDMNNFYEQY 156 Query: 137 RSIEPWLKTVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++I+PWL+ + + + LQS EDR K+DGLYEC++CACCST+CPSYWWN+++YLG Sbjct: 157 KNIQPWLQRKNEAVEQKGKAQYLQSVEDRSKLDGLYECILCACCSTACPSYWWNAEKYLG 216 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+IDSRDE ERL L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK Sbjct: 217 PAVLMQAYRWIIDSRDENSVERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 276 Query: 253 ML 254 +L Sbjct: 277 LL 278 >gi|187926536|ref|YP_001892881.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12J] gi|187929227|ref|YP_001899714.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia pickettii 12J] gi|241663418|ref|YP_002981778.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia pickettii 12D] gi|241666047|ref|YP_002984406.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia pickettii 12D] gi|309782645|ref|ZP_07677366.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] gi|309783480|ref|ZP_07678183.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] gi|187726117|gb|ACD27282.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12J] gi|187728290|gb|ACD29454.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12J] gi|240865445|gb|ACS63106.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12D] gi|240868074|gb|ACS65734.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12D] gi|308917766|gb|EFP63460.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] gi|308918423|gb|EFP64099.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] Length = 233 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+LD M+LD L+ +K K+D ++ RRSCREG+CGS Sbjct: 3 RIFEVYRYDPDKDAAPRMQTYEVELDGHERMLLDALVKLK-KLDESIAFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+++ I + PLP + V++DL+VDM+ F++Q+ SI+P+L Sbjct: 62 DAMNINGKNGLACLTNMRELPEKIVLRPLPGLPVVRDLIVDMTQFFNQYHSIKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R+++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEEREELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DQATSERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|186470392|ref|YP_001861710.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia phymatum STM815] gi|186473183|ref|YP_001860525.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia phymatum STM815] gi|184195515|gb|ACC73479.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia phymatum STM815] gi|184196701|gb|ACC74664.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia phymatum STM815] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ ++ I + PLP + V++DL+ D + F++Q+ SI P+L + Sbjct: 63 DAMNINGKNGLACLTNLNELPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIRPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 234 >gi|170691026|ref|ZP_02882192.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia graminis C4D1M] gi|170691139|ref|ZP_02882305.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia graminis C4D1M] gi|170144275|gb|EDT12437.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia graminis C4D1M] gi|170144388|gb|EDT12550.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia graminis C4D1M] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDRDAAPRMQTYEIEIDSHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 234 >gi|17546712|ref|NP_520114.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum GMI1000] gi|83748084|ref|ZP_00945113.1| Succinate dehydrogenase iron-sulfur protein [Ralstonia solanacearum UW551] gi|207723908|ref|YP_002254306.1| succinate dehydrogenase (iron-sulfur protein subunit) [Ralstonia solanacearum MolK2] gi|207742804|ref|YP_002259196.1| succinate dehydrogenase (iron-sulfur protein subunit) [Ralstonia solanacearum IPO1609] gi|300691094|ref|YP_003752089.1| succinate dehydrogenase, Fe-S protein [Ralstonia solanacearum PSI07] gi|300703707|ref|YP_003745309.1| succinate dehydrogenase, Fe-S protein [Ralstonia solanacearum CFBP2957] gi|17429011|emb|CAD15695.1| putative succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] gi|83725270|gb|EAP72419.1| Succinate dehydrogenase iron-sulfur protein [Ralstonia solanacearum UW551] gi|206589114|emb|CAQ36076.1| succinate dehydrogenase (iron-sulfur protein subunit) [Ralstonia solanacearum MolK2] gi|206594198|emb|CAQ61125.1| succinate dehydrogenase (iron-sulfur protein subunit) [Ralstonia solanacearum IPO1609] gi|299066399|emb|CBJ37584.1| succinate dehydrogenase, Fe-S protein [Ralstonia solanacearum CMR15] gi|299071370|emb|CBJ42689.1| succinate dehydrogenase, Fe-S protein [Ralstonia solanacearum CFBP2957] gi|299078154|emb|CBJ50797.1| succinate dehydrogenase, Fe-S protein [Ralstonia solanacearum PSI07] Length = 233 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+LD M+LD L+ +K K+D ++ RRSCREG+CGS Sbjct: 3 RIFEVYRYDPDKDAAPRMQTYEVELDGHERMLLDALVKLK-KLDESIAFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+++ I + PLP + V++DL+VDM+ F++Q+ SI+P+L Sbjct: 62 DAMNINGKNGLACLTNMRELPEKIVLRPLPGLPVVRDLIVDMTQFFNQYHSIKPFLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R+++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEEREELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DQATSERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|209731290|gb|ACI66514.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Salmo salar] gi|303664490|gb|ADM16144.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Salmo salar] Length = 283 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 149/237 (62%), Positives = 186/237 (78%), Gaps = 4/237 (1%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K++++YRW+PD P M T+ +DL+ CGPMVLD L+ IKN++D TLT RRSCREGI Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G NTLAC K + A +YPLPHM V+KDLV DMS+FY+Q++SIEP+L Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + ++ Q+ EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDEF ERL L+DPF LYRCHTI NCT++CPKGLNP KAIA+IK M+ K Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTITNCTKTCPKGLNPGKAIAEIKKMMATYK 276 >gi|307726508|ref|YP_003909721.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1003] gi|307726613|ref|YP_003909826.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1003] gi|307587033|gb|ADN60430.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1003] gi|307587138|gb|ADN60535.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1003] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ ++ I + PLP + V++DL+ D + F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNLNELPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 234 >gi|225713990|gb|ACO12841.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Lepeophtheirus salmonis] Length = 301 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 149/235 (63%), Positives = 180/235 (76%), Gaps = 6/235 (2%) Query: 26 NLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + IYRWNPDN P + Y V+L +CGPMVLD L+ IKN+IDPTLT RRSCREGI Sbjct: 45 KVKTFAIYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDALIKIKNEIDPTLTFRRSCREGI 104 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC+ + I +YPLPHM V+KDLV DM++FY Q+RSI+PWL Sbjct: 105 CGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWL 164 Query: 144 KTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + ++LQS ED K+DGLYEC++CACCSTSCPSYWWN DRYLGPA+L+QA Sbjct: 165 QREDESSTSEGNLQILQSVEDGAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQA 224 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD ER+D L DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 225 YRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCPKGLNPGKAIAEIKKLL 279 >gi|124267354|ref|YP_001021358.1| succinate dehydrogenase subunit B [Methylibium petroleiphilum PM1] gi|124260129|gb|ABM95123.1| succinate dehydrogenase subunit B [Methylibium petroleiphilum PM1] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 172/232 (74%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD L +K +DP+L+ RRSCREG+CGS Sbjct: 4 RTFQIYRYDPDTDAKPYMQTLEVELDGSERMLLDALNKLKA-VDPSLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+ + G + + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 63 DAMNINGKNGLACLTNMRTLPGTVVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLVNEE 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 VPPEKERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ RLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQDTAGRLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|209517895|ref|ZP_03266729.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. H160] gi|209501728|gb|EEA01750.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. H160] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 177/232 (76%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P + TY +++D+ M+LD ++ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRVQTYEIEIDSHERMLLDAIVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYNSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS +R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPAERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|171059384|ref|YP_001791733.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Leptothrix cholodnii SP-6] gi|170776829|gb|ACB34968.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Leptothrix cholodnii SP-6] Length = 234 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 130/232 (56%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M + V+LD M+LD L+ +K +DPTL+ RRSCREG+CGS Sbjct: 4 RTFQIYRYDPDKDSKPYMQSIDVELDGHERMLLDALIKLKA-VDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+D+ G I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L S Sbjct: 63 DAMNINGKNGLACLTNMRDLPGVIVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLLNDS 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 IPPDKERLQSPEERDELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQGTSERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|224055647|ref|XP_002298583.1| predicted protein [Populus trichocarpa] gi|222845841|gb|EEE83388.1| predicted protein [Populus trichocarpa] Length = 285 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 147/237 (62%), Positives = 182/237 (76%), Gaps = 2/237 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y VDL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 46 TNPTQPQHLKTFQIYRWNPDNPTKPELQNYEVDLNKCGPMVLDALIKIKNEIDPTLTFRR 105 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 106 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 165 Query: 139 IEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEPWLK +P P KE+LQ+ +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA L Sbjct: 166 IEPWLKRKNPPPVKGKEILQTKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAAL 225 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L A RW++DSRDE+ ERLD + D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 226 LHANRWIMDSRDEYTKERLDAVNDEFKLYRCHTILNCARACPKGLNPGKQIQNIKKL 282 >gi|3273346|dbj|BAA31216.1| fumarate reductase iron-sulpher protein subunit [Rhodoferax fermentans] Length = 234 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 129/230 (56%), Positives = 170/230 (73%), Gaps = 1/230 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR+NPD P M T V+LD M+LD L+ +K +IDPTL+ RRSCREGICGS Sbjct: 4 RTFNIYRYNPDTDAKPYMQTIEVELDGSERMLLDALVKLK-EIDPTLSYRRSCREGICGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +++ + I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLINLRTLPDTITLKPLPGLPVIRDLIVDMTLFFQQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R+ ++GLYEC++CA CSTSCP YWWN D+++GPA LLQAYR++ DSR Sbjct: 123 RPPEKERLQSPEEREVLNGLYECILCASCSTSCPVYWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DE ERLDNLEDP+RL+RC TIMNC CPKGLNP AI KIK +++ R Sbjct: 183 DEATSERLDNLEDPYRLFRCTTIMNCVDVCPKGLNPTAAIGKIKELMVRR 232 >gi|67083789|gb|AAY66829.1| succinate dehydrogenase Ip subunit [Ixodes scapularis] Length = 282 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 146/235 (62%), Positives = 185/235 (78%), Gaps = 3/235 (1%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 G+K +K++ IYRWNP+ P + TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCR Sbjct: 33 GDKGVKKFEIYRWNPEKKGDKPRLQTYEVDLNACGPMVLDALIKIKNEVDPTLTFRRSCR 92 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG NTLAC+ + + + +YPLPHM V+KDLV DM+ FY Q++SI+P Sbjct: 93 EGICGSCAMNIDGRNTLACICKIDNPGQSTKIYPLPHMYVVKDLVPDMTLFYEQYKSIQP 152 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL+ + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWNSDRYLGPA L+Q Sbjct: 153 WLQKKTEVKLGEQQHLQSIEDRKKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALMQV 212 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD+ ERL LEDPF +YRCHTIMNCT++CPK LNP +AI ++K ++ Sbjct: 213 YRWVIDSRDDNTQERLKRLEDPFSMYRCHTIMNCTKTCPKSLNPGRAIGELKKLV 267 >gi|195448102|ref|XP_002071510.1| GK25101 [Drosophila willistoni] gi|194167595|gb|EDW82496.1| GK25101 [Drosophila willistoni] Length = 366 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 185/239 (77%), Gaps = 4/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 A + EK +K + +YRW P P M TY +DL++CG MVLD L+ IKN++D TLT RRS Sbjct: 111 AKSKEKRMKSFEVYRWKPG-DNKPEMQTYDIDLNDCGAMVLDALIKIKNEMDQTLTFRRS 169 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CREGICGSC MNIDGTNTLAC+ + +G +YPLPH+ V++DLV D++ FY Q+RSI Sbjct: 170 CREGICGSCAMNIDGTNTLACITAINTKRGPCRIYPLPHLYVVRDLVPDLTQFYDQYRSI 229 Query: 140 EPWLKT---VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + + LQS EDR+K+DGLYEC++CACC T+CPSYWWNS++YLGPA+L Sbjct: 230 QPWLQRGNIKNELGKAQYLQSLEDREKLDGLYECILCACCQTACPSYWWNSEKYLGPAVL 289 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RL L+DP++LYRCHTI+NCT +CPK LNPA+AI ++K ML+ Sbjct: 290 MQAYRWIIDSRDEATEQRLGFLQDPYKLYRCHTILNCTNTCPKNLNPARAIIQLKQMLM 348 >gi|319792253|ref|YP_004153893.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus EPS] gi|315594716|gb|ADU35782.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus EPS] Length = 233 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 130/232 (56%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T ++LD M+LD L+ +K DPTL+ RRSCREG+CGS Sbjct: 3 RTFQIYRYDPDKDAKPYMQTIEIELDGHERMLLDALMKLKA-QDPTLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L+ + Sbjct: 62 DAMNINGKNGLACLTNMLTLKGTIVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLQNDN 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 VPPEKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPK LNP KAI KIK +++ R I Sbjct: 182 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKNLNPTKAIGKIKELMVRRAI 233 >gi|312282975|dbj|BAJ34353.1| unnamed protein product [Thellungiella halophila] Length = 279 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 144/230 (62%), Positives = 180/230 (78%), Gaps = 2/230 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 LK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCREGIC Sbjct: 48 KLKTFQIYRWNPDNPGKPQLQDYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGIC 107 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC MNIDG N LAC+ ++D + PLPHM VIKDLVVDM++FY+Q++SIEPWLK Sbjct: 108 GSCAMNIDGCNGLACLTKIQDGASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167 Query: 146 VSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P E+LQS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW+ Sbjct: 168 KNPPSEPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 227 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K IA IK + Sbjct: 228 SDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIAHIKQL 277 >gi|327296007|ref|XP_003232698.1| succinate dehydrogenase iron-sulfur protein [Trichophyton rubrum CBS 118892] gi|326465009|gb|EGD90462.1| succinate dehydrogenase iron-sulfur protein [Trichophyton rubrum CBS 118892] Length = 284 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 141/250 (56%), Positives = 178/250 (71%), Gaps = 3/250 (1%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 ++ +K ++IYRWNPD P M TY +DL+ GPMVLD L+ I Sbjct: 32 ANAKPTEASSAPTSAPAPKMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRI 91 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN+ DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDL Sbjct: 92 KNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDL 151 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q++SI+P+L+ +P +E QS DR+K+DGLYEC++CACCSTSCPSYW Sbjct: 152 VPDMTQFYKQYKSIKPYLQRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYW 211 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPA+LLQ+YRWLIDSRDE +R L++ +YRCHTI+NC+++CPKGLNP Sbjct: 212 WNSEEYLGPALLLQSYRWLIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPG 271 Query: 245 KAIAKIKMML 254 KAIA+IK M+ Sbjct: 272 KAIAEIKKMM 281 >gi|70997740|ref|XP_753605.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus fumigatus Af293] gi|66851241|gb|EAL91567.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus fumigatus Af293] gi|159126661|gb|EDP51777.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus fumigatus A1163] Length = 299 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 143/240 (59%), Positives = 182/240 (75%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +P+ +K++ +YRWNPD P M TY +DL+ GPM+LD L+ IKN+IDPTLT R Sbjct: 58 PSPSQAPRIKKFHVYRWNPDKPTEKPKMQTYSLDLNKTGPMMLDALIRIKNEIDPTLTFR 117 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D K +YPLPH V+KDLV D+++FY Q+ Sbjct: 118 RSCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQY 177 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 178 KSIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 237 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK ML Sbjct: 238 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLA 297 >gi|326475435|gb|EGD99444.1| succinate dehydrogenase iron-sulfur protein [Trichophyton tonsurans CBS 112818] Length = 284 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 141/249 (56%), Positives = 178/249 (71%), Gaps = 3/249 (1%) Query: 9 RSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIK 67 ++ +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IK Sbjct: 33 NAKSTEASSAPTSAPAPKMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIK 92 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLV 126 N+ DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV Sbjct: 93 NEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDLV 152 Query: 127 VDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 DM+ FY Q++SI+P+L+ +P +E QS DR+K+DGLYEC++CACCSTSCPSYWW Sbjct: 153 PDMTQFYKQYKSIKPYLQRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYWW 212 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 NS+ YLGPA+LLQ+YRWLIDSRDE +R L++ +YRCHTI+NC+++CPKGLNP K Sbjct: 213 NSEEYLGPALLLQSYRWLIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGK 272 Query: 246 AIAKIKMML 254 AIA+IK M+ Sbjct: 273 AIAEIKKMM 281 >gi|328773437|gb|EGF83474.1| hypothetical protein BATDEDRAFT_18595 [Batrachochytrium dendrobatidis JAM81] Length = 279 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 141/230 (61%), Positives = 180/230 (78%), Gaps = 1/230 (0%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K + IYRWNP+ P + TY +DL+ CGPM LD L+ IKN+IDPTLT RRSCREGIC Sbjct: 47 MKSFEIYRWNPEKSEEKPRIQTYQIDLNQCGPMTLDALIKIKNEIDPTLTFRRSCREGIC 106 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC MNI+G NTLAC+ ++ + ++PLPH V+KDLV D+++FY Q++SIEP+LK Sbjct: 107 GSCAMNINGGNTLACLSRIERSSKPLKIFPLPHTYVVKDLVPDLTNFYKQYKSIEPYLKQ 166 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + P +E LQ+ DR K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA+L+QAYRW+ID Sbjct: 167 KTAPPERENLQTIADRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLMQAYRWMID 226 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD++ ER L+DPF LYRCHTIMNC ++CPKGLNP AIA+IK + Sbjct: 227 SRDQYGAERRAALQDPFSLYRCHTIMNCARTCPKGLNPGLAIAEIKKQMA 276 >gi|121611265|ref|YP_999072.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Verminephrobacter eiseniae EF01-2] gi|121555905|gb|ABM60054.1| succinate dehydrogenase subunit B [Verminephrobacter eiseniae EF01-2] Length = 234 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 172/232 (74%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M T + LD M+LD LL +K DP+L+ RRSCREG+CGS Sbjct: 4 RTFHIYRYDPDKDAKPRMQTVEIGLDGHERMLLDALLKLKQ-QDPSLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M + GAI + PLP + VI+DL+VDM+ F+ Q+ S++P+L Sbjct: 63 DAMNINGKNGLACLTNMNTLTGAITLKPLPGLPVIRDLIVDMTQFFKQYNSVKPYLINNG 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS ++R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 LLPEKERLQSPQERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLD+L+DP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R I Sbjct: 183 DDATGERLDDLQDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAI 234 >gi|326477471|gb|EGE01481.1| succinate dehydrogenase iron-sulfur subunit [Trichophyton equinum CBS 127.97] Length = 284 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 141/249 (56%), Positives = 178/249 (71%), Gaps = 3/249 (1%) Query: 9 RSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIK 67 ++ +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IK Sbjct: 33 NAKSTEASSAPTSAPAPKMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIK 92 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLV 126 N+ DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV Sbjct: 93 NEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDLV 152 Query: 127 VDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 DM+ FY Q++SI+P+L+ +P +E QS DR+K+DGLYEC++CACCSTSCPSYWW Sbjct: 153 PDMTQFYKQYKSIKPYLQRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYWW 212 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 NS+ YLGPA+LLQ+YRWLIDSRDE +R L++ +YRCHTI+NC+++CPKGLNP K Sbjct: 213 NSEEYLGPALLLQSYRWLIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGK 272 Query: 246 AIAKIKMML 254 AIA+IK M+ Sbjct: 273 AIAEIKKMM 281 >gi|328855226|gb|EGG04354.1| hypothetical protein MELLADRAFT_117110 [Melampsora larici-populina 98AG31] Length = 291 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 147/236 (62%), Positives = 181/236 (76%), Gaps = 2/236 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + K++ IYRWNPD P + TY +D+ CGPMVLD L+ IKN+IDPTLT RRSC Sbjct: 54 STDTKTKQFSIYRWNPDEPSQKPSLQTYSIDMKKCGPMVLDALIKIKNEIDPTLTFRRSC 113 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNIDG NTLAC+K K+ + VYPLPHM +IKDLV DM+ FY Q++SI Sbjct: 114 REGICGSCAMNIDGVNTLACLKRIPKESSSDVKVYPLPHMYIIKDLVPDMTQFYKQYKSI 173 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 EP+LK +P E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA+L+QA Sbjct: 174 EPFLKNDNPPAQGEFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQA 233 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YRW+ DSRD + +R + L++ F LYRCHTI NCT++CPKGLNPAKAIA IK + Sbjct: 234 YRWIADSRDGYSEDRKEKLQNTFSLYRCHTIFNCTKTCPKGLNPAKAIAHIKREMA 289 >gi|89573829|gb|ABD77140.1| succinate dehydrogenase complex subunit B [Homo sapiens] Length = 255 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 147/234 (62%), Positives = 182/234 (77%), Gaps = 4/234 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 22 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 142 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIA 255 >gi|241765618|ref|ZP_04763573.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax delafieldii 2AN] gi|241364556|gb|EER59622.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax delafieldii 2AN] Length = 234 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 129/232 (55%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T ++LD M+LD L+ +K + DPTL+ RRSCREG+CGS Sbjct: 4 RTFQIYRYDPDKDAKPYMQTIEIELDGHERMLLDALIKLK-EQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 63 DAMNINGKNGLACLTNMNTLKGIIVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLINEE 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 LPPEKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ G RLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK +++ R I Sbjct: 183 DDATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELMVRRAI 234 >gi|325095841|gb|EGC49151.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces capsulatus H88] Length = 283 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 142/249 (57%), Positives = 182/249 (73%), Gaps = 4/249 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+V + + LK ++IYRWNPD P M Y +DL+ GPMVLD L+ IKN Sbjct: 34 SKVVDQST-PSTSQSPKLKTFKIYRWNPDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + + +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 D+++FY Q++SI+P+L+ +P +E+ QS DR+K+DGLYEC++CACCSTSCPSYWWN Sbjct: 153 DLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECILCACCSTSCPSYWWN 212 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S+ YLGPA+LLQ+YRWLIDSRDE ER +L++ +YRCHTI+NCT++CPKGLNP A Sbjct: 213 SEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLA 272 Query: 247 IAKIKMMLL 255 IA+IK M+ Sbjct: 273 IAEIKKMMA 281 >gi|261199688|ref|XP_002626245.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces dermatitidis SLH14081] gi|239594453|gb|EEQ77034.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces dermatitidis SLH14081] gi|239615616|gb|EEQ92603.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces dermatitidis ER-3] gi|327354240|gb|EGE83097.1| succinate dehydrogenase iron-sulfur subunit [Ajellomyces dermatitidis ATCC 18188] Length = 282 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 139/240 (57%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A + LK +++YRWNPD P M Y +DL+ GPMVLD L+ IKN+ DPTLT R Sbjct: 41 PATSESPRLKTFKVYRWNPDKPTEKPYMQDYTLDLNKTGPMVLDALIRIKNEQDPTLTFR 100 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + + +YPLPH V+KDLV D+++FY Q+ Sbjct: 101 RSCREGICGSCAMNIDGVNTLACLCRIPTETAKESRIYPLPHTYVVKDLVPDLTYFYKQY 160 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ +P +E QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+ Sbjct: 161 KSIKPYLQRDTPSPDGREHRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAL 220 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWLIDSRDE ER +L++ +YRCHTI+NC+++CPKGLNP AIA+IK M+ Sbjct: 221 LLQSYRWLIDSRDEKTEERKADLDNSMSVYRCHTILNCSRTCPKGLNPGLAIAEIKKMMA 280 >gi|160897865|ref|YP_001563447.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Delftia acidovorans SPH-1] gi|160363449|gb|ABX35062.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Delftia acidovorans SPH-1] Length = 234 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 129/233 (55%), Positives = 179/233 (76%), Gaps = 2/233 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD L+ +K ++DP+++ RRSCREG+CGS Sbjct: 3 RTFKIYRYDPDKDAKPYMQTVEVELDGHERMLLDALVKLK-EMDPSISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +MK ++G I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L+ S Sbjct: 62 DAMNINGKNGLACLTNMKTLQGDIVLKPLPGLPVIRDLIVDMTQFFKQYHSIKPYLQNDS 121 Query: 148 -PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 FASPTKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RDE G+RLDNLEDP+RL+RCHTIMNC CPK LNP +AI KIK +++ R I Sbjct: 182 RDEATGDRLDNLEDPYRLFRCHTIMNCVDVCPKHLNPTQAIGKIKELMVRRAI 234 >gi|221124362|ref|XP_002163025.1| PREDICTED: similar to Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Hydra magnipapillata] gi|260220783|emb|CBA28692.1| Succinate dehydrogenase iron-sulfur subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 234 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 129/232 (55%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M V+LD M+LD L+ +K IDP+++ RRSCREG+CGS Sbjct: 4 RTFSIYRYDPDKDAKPYMQDIEVELDGSERMLLDALMKLKA-IDPSISFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M + G I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNMLTLPGKIVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 VPPEKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK M++ R + Sbjct: 183 DQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKEMMVLRAV 234 >gi|73542008|ref|YP_296528.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia eutropha JMP134] gi|72119421|gb|AAZ61684.1| succinate dehydrogenase subunit B [Ralstonia eutropha JMP134] Length = 233 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+LD M+LD L+ +K K+D T++ RRSCREG+CGS Sbjct: 3 RIFEVYRYDPDKDAAPRMQTYEVELDGHERMLLDALVKLK-KLDETISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+++ I + PLP + V++DL+VDM++F+ Q+ SI+P+L Sbjct: 62 DAMNINGKNGLACLTNMRELPDRIVLRPLPGLPVVRDLIVDMTNFFKQYNSIKPFLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNL DP+RL+RCH+IMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DQATSERLDNLNDPYRLFRCHSIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|240273353|gb|EER36874.1| succinate dehydrogenase iron-sulphur protein [Ajellomyces capsulatus H143] Length = 283 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 142/249 (57%), Positives = 182/249 (73%), Gaps = 4/249 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+V + + LK ++IYRWNPD P M Y +DL+ GPMVLD L+ IKN Sbjct: 34 SKVADQST-PSTSQSPRLKTFKIYRWNPDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + + +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 D+++FY Q++SI+P+L+ +P +E+ QS DR+K+DGLYEC++CACCSTSCPSYWWN Sbjct: 153 DLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECILCACCSTSCPSYWWN 212 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S+ YLGPA+LLQ+YRWLIDSRDE ER +L++ +YRCHTI+NCT++CPKGLNP A Sbjct: 213 SEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLA 272 Query: 247 IAKIKMMLL 255 IA+IK M+ Sbjct: 273 IAEIKKMMA 281 >gi|225558114|gb|EEH06399.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces capsulatus G186AR] Length = 283 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 142/249 (57%), Positives = 182/249 (73%), Gaps = 4/249 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+V + + LK ++IYRWNPD P M Y +DL+ GPMVLD L+ IKN Sbjct: 34 SKVADQST-PSTSQSPRLKTFKIYRWNPDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + + +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 D+++FY Q++SI+P+L+ +P +E+ QS DR+K+DGLYEC++CACCSTSCPSYWWN Sbjct: 153 DLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECILCACCSTSCPSYWWN 212 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S+ YLGPA+LLQ+YRWLIDSRDE ER +L++ +YRCHTI+NCT++CPKGLNP A Sbjct: 213 SEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLA 272 Query: 247 IAKIKMMLL 255 IA+IK M+ Sbjct: 273 IAEIKKMMA 281 >gi|113868590|ref|YP_727079.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia eutropha H16] gi|194290221|ref|YP_002006128.1| succinate dehydrogenase iron-sulfur subunit [Cupriavidus taiwanensis LMG 19424] gi|33320235|gb|AAQ05853.1| SdhB protein [Cupriavidus necator] gi|113527366|emb|CAJ93711.1| succinate dehydrogenase (Fe-S protein subunit) [Ralstonia eutropha H16] gi|193224056|emb|CAQ70065.1| succinate dehydrogenase, Fe-S protein [Cupriavidus taiwanensis LMG 19424] Length = 233 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+LD M+LD L+ +K K+D T++ RRSCREG+CGS Sbjct: 3 RIFEVYRYDPDKDAAPRMQTYEVELDGHERMLLDALVKLK-KLDETISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+++ I + PLP + V++DL+VDM++F+ Q+ SI+P+L Sbjct: 62 DAMNINGKNGLACLTNMRELPDRIVLRPLPGLPVVRDLIVDMTNFFKQYNSIKPFLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNL DP+RL+RCH+IMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DQATNERLDNLNDPYRLFRCHSIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|24643156|ref|NP_573340.1| CG7349 [Drosophila melanogaster] gi|22832534|gb|AAF48905.2| CG7349 [Drosophila melanogaster] Length = 437 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 178/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK + IYRW P P TY VDL+ CG MVLD L+ IKN++DPTLT RRSC Sbjct: 181 KAKKPRLKTFEIYRWKP--GDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSC 238 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 239 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSI 298 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + LQS +DR +DGLYEC++CACC TSCPSYWWNS++YLGPA+L Sbjct: 299 QPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVL 358 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 359 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 417 >gi|325982411|ref|YP_004294813.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosomonas sp. AL212] gi|325531930|gb|ADZ26651.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosomonas sp. AL212] Length = 231 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 128/231 (55%), Positives = 172/231 (74%), Gaps = 1/231 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR++PD P M Y V L M+LD LL IK+ ID +L+LRRSCREG+CGS Sbjct: 2 KFSIYRYDPDKDEKPYMQDYDVQLTATDKMLLDALLRIKS-IDDSLSLRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LAC+ +K +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P+L P Sbjct: 61 AMNINGRNGLACITPLKSLKEPVEIRPLPGLPVIRDLIVDMTQFFQQYHSIKPYLINNDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS E+R +DG+YEC++CACC+TSCPS+WWN D+++GPA LLQAYR+L DSRD Sbjct: 121 PPETERLQSPEERAALDGVYECILCACCTTSCPSFWWNPDKFVGPAGLLQAYRFLADSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ERLD+LEDP+RL+RCH+IMNC +CPKGLNP +AI KIK M++ R + Sbjct: 181 QATAERLDDLEDPYRLFRCHSIMNCVDACPKGLNPTQAIGKIKDMMVKRMV 231 >gi|119479245|ref|XP_001259651.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Neosartorya fischeri NRRL 181] gi|119407805|gb|EAW17754.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Neosartorya fischeri NRRL 181] Length = 299 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 143/240 (59%), Positives = 181/240 (75%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ +K++ +YRWNPD P M TY +DL+ GPM+LD L+ IKN+IDPTLT R Sbjct: 58 PNPSQSPRIKKFHVYRWNPDQPTEKPKMQTYSLDLNKTGPMMLDALIRIKNEIDPTLTFR 117 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D K +YPLPH V+KDLV D+++FY Q+ Sbjct: 118 RSCREGICGSCAMNIDGINTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQY 177 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 178 KSIKPYLQRDTKTEDGLEHRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 237 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK ML Sbjct: 238 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLA 297 >gi|154280707|ref|XP_001541166.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150411345|gb|EDN06733.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 283 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 142/249 (57%), Positives = 181/249 (72%), Gaps = 4/249 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+V + LK ++IYRWNPD P M Y +DL+ GPMVLD L+ IKN Sbjct: 34 SKVADQST-PSTLQSPRLKTFKIYRWNPDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + + +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 D+++FY Q++SI+P+L+ +P +E+ QS DR+K+DGLYEC++CACCSTSCPSYWWN Sbjct: 153 DLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECILCACCSTSCPSYWWN 212 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S+ YLGPA+LLQ+YRWLIDSRDE ER +L++ +YRCHTI+NCT++CPKGLNP A Sbjct: 213 SEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLA 272 Query: 247 IAKIKMMLL 255 IA+IK M+ Sbjct: 273 IAEIKKMMA 281 >gi|328352626|emb|CCA39024.1| DNA ligase 1 [Pichia pastoris CBS 7435] Length = 1087 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 137/229 (59%), Positives = 170/229 (74%), Gaps = 3/229 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK +++YRW+PD P M Y +DL+ CGPMVLD LL IKN+ D TLT RRSC Sbjct: 29 QNQPRLKSFKVYRWSPDTPEIKPHMQEYKIDLNECGPMVLDALLKIKNEQDATLTFRRSC 88 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC K ++ + +YPLPHM V++DLV D++HFY Q++SI Sbjct: 89 REGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPLPHMFVVRDLVPDLTHFYKQYKSI 148 Query: 140 EPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ S P KE LQS EDR+K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+Q Sbjct: 149 QPFLQRDSVPSDGKENLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLMQ 208 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 AYRWLIDSRD+ R + L++ LYRCHTIMNC ++CPKGLNP I Sbjct: 209 AYRWLIDSRDQASVARKEMLQNSMSLYRCHTIMNCARTCPKGLNPGTLI 257 >gi|239793134|dbj|BAH72989.1| iron-sulfur subunit of succinate dehydrogenase [Mortierella alpina] Length = 272 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 146/241 (60%), Positives = 188/241 (78%), Gaps = 1/241 (0%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 + + K K ++IYRWNPD P + +Y VD++NCGPMVLD L+ IKN+IDPTL Sbjct: 30 RSFATEAPAKKTKTFQIYRWNPDQPAEKPKLQSYEVDMNNCGPMVLDALIKIKNEIDPTL 89 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 T RRSCREGICGSC MNI G+NTLAC+ ++ +YPLPH V+KDL+ D++ FY+ Sbjct: 90 TFRRSCREGICGSCAMNIGGSNTLACICKIEVDNKPTKIYPLPHTYVVKDLIPDLTQFYA 149 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 Q++SIEP+LK +P+P +E LQ+ EDR+K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA Sbjct: 150 QYKSIEPFLKQKTPEPERENLQTIEDRKKLDGLYECILCACCSTSCPSYWWNSDQYLGPA 209 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+F ER L++PF LYRCHTIMNC ++CPKGLNP AIA+IK + Sbjct: 210 VLMQAYRWMIDSRDQFGPERRQALQNPFSLYRCHTIMNCAKTCPKGLNPGLAIAQIKKTM 269 Query: 255 L 255 Sbjct: 270 A 270 >gi|323529180|ref|YP_004231332.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1001] gi|323529264|ref|YP_004231416.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1001] gi|323386182|gb|ADX58272.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1001] gi|323386266|gb|ADX58356.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1001] Length = 234 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDRDAAPRMQTYEIEIDSHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI P+L + Sbjct: 63 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIRPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 234 >gi|319943667|ref|ZP_08017948.1| succinate dehydrogenase iron-sulfur subunit [Lautropia mirabilis ATCC 51599] gi|319742900|gb|EFV95306.1| succinate dehydrogenase iron-sulfur subunit [Lautropia mirabilis ATCC 51599] Length = 240 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 124/238 (52%), Positives = 173/238 (72%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ IYR++PD P M V+L M+LD L+ IK ++D + RRSCR Sbjct: 3 NTDRRRMKFSIYRFDPDKDQKPYMQDIEVELLPTDKMLLDALMRIKAEVDESFAFRRSCR 62 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EG+CGS MNI+G N+LAC+ ++K +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P Sbjct: 63 EGVCGSDAMNINGKNSLACITNLKTLKEPVVLKPLPGLPVIRDLIVDMTQFFKQYESIKP 122 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L + P KE LQS DR+++DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR Sbjct: 123 YLINDTQPPEKERLQSPVDREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L D+RD+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK +++ R + Sbjct: 183 FLADTRDQATNERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELMVRRTV 240 >gi|289621268|emb|CBI52051.1| unnamed protein product [Sordaria macrospora] Length = 282 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 142/241 (58%), Positives = 176/241 (73%), Gaps = 3/241 (1%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 + LK ++IYRWNPD P M +Y +DL+ GPMVLD L+ IKN++DPTLT Sbjct: 41 HASDGQSPKLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMVLDALVRIKNELDPTLTF 100 Query: 77 RRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNI+GTNTLAC + D + +YPLPH V+KDLV D++ FY Q Sbjct: 101 RRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQ 160 Query: 136 HRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++SI+P+L+ +P KE Q+ DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA Sbjct: 161 YKSIKPYLQRDTPSPDGKEYRQTKADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPA 220 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ILLQ+YRWL DSRDE +R D L + LYRCHTI+NCT++CPKGLNP AIA IK L Sbjct: 221 ILLQSYRWLADSRDERHAQRKDALNNSMSLYRCHTILNCTRTCPKGLNPGLAIANIKKEL 280 Query: 255 L 255 Sbjct: 281 A 281 >gi|301105335|ref|XP_002901751.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Phytophthora infestans T30-4] gi|262099089|gb|EEY57141.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Phytophthora infestans T30-4] Length = 271 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 150/238 (63%), Positives = 189/238 (79%), Gaps = 1/238 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + T KN+K ++IYRW+P++K P TY VDLD+CGPMVLD L+ IKN+ DPTLT RR Sbjct: 31 SQATKPKNIKYFKIYRWDPESKEKPYQCTYPVDLDDCGPMVLDALIKIKNEQDPTLTFRR 90 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MNIDG NTLAC+ +K K +++PLPHM VI+DLV DM++FY Q+ S Sbjct: 91 SCREGICGSCAMNIDGGNTLACLSPIKKNKDVSSIHPLPHMFVIRDLVPDMNNFYDQYTS 150 Query: 139 IEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I+PWL + P+ E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 151 IKPWLHSDKPRNVNHEHLQSIEDRKKLDGMYECILCACCSTSCPSYWWNPDKYLGPAVLM 210 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QA+RW+ DSRD+ ERL L+D F+LY+CHTIMNCT++CPKGLNPA+AI KIK L Sbjct: 211 QAFRWIEDSRDDKTEERLRALDDSFKLYKCHTIMNCTRTCPKGLNPAQAIGKIKTRLA 268 >gi|19528373|gb|AAL90301.1| RE03249p [Drosophila melanogaster] Length = 437 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 179/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 ++ LK + IYRW P P TY VDL+ CG MVLD L+ IKN++DPTLT RRSC Sbjct: 181 KAKKQRLKTFEIYRWKP--GDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSC 238 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 239 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSI 298 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + LQS +DR +DGLYEC++CACC TSCPSYWWNS++YLGPA+L Sbjct: 299 QPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVL 358 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 359 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 417 >gi|195567613|ref|XP_002107353.1| GD17417 [Drosophila simulans] gi|194204760|gb|EDX18336.1| GD17417 [Drosophila simulans] Length = 462 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 179/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK + IYRW P P TY VDL+ CG MVLD L+ IKN++DPTLT RRSC Sbjct: 206 KAKKPRLKTFEIYRWKP--GDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSC 263 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 264 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSI 323 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + + LQS +DR +DGLYEC++CACC TSCPSYWWNS++YLGPA+L Sbjct: 324 QPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVL 383 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 384 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 442 >gi|322692734|gb|EFY84626.1| succinate dehydrogenase iron-sulfur protein precursor [Metarhizium acridum CQMa 102] Length = 277 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 144/237 (60%), Positives = 180/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 N+K ++IYRWNPD P M +Y +DL+ GPMVLD L+ IKN++DPTLT RRSC Sbjct: 39 EKAPNMKTFQIYRWNPDTPTEKPRMQSYTIDLNKTGPMVLDALVRIKNELDPTLTFRRSC 98 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+G NTLAC + + + +YPLPH V+KDLV D+++FY Q++SI Sbjct: 99 REGICGSCAMNINGQNTLACLCRIPAESSSEVKLYPLPHTYVVKDLVPDLTYFYKQYKSI 158 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ +P KE QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ Sbjct: 159 KPYLQRDTPSPDGKEYRQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQ 218 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +YRWL DSRDE ER NLE+ LYRCHTI+NCT++CPKGLNP KAIA+IK + Sbjct: 219 SYRWLADSRDERSAERRANLENNMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 275 >gi|71004650|ref|XP_756991.1| succinate dehydrogenase [Ustilago maydis 521] gi|416903|sp|P32420|DHSB_USTMA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|5231|emb|CAA77798.1| succinate dehydrogenase [Ustilago maydis] gi|46096685|gb|EAK81918.1| DHSB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (IP) [Ustilago maydis 521] Length = 295 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 181/233 (77%), Gaps = 2/233 (0%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++LK+++IYRWNPD P + +Y +DL+ GPMVLD L+ IKN+IDPTLT RRSCRE Sbjct: 49 PQHLKQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCRE 108 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG NTLAC+ + + +YPLPHM ++KDLV D++ FY Q+RSIEP+ Sbjct: 109 GICGSCAMNIDGVNTLACLCRIDK-QNDTKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPF 167 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 LK+ + E LQS E+R+++DGLYEC++CACCSTSCPSYWWN D YLGPA+L+QAYRW Sbjct: 168 LKSNNTPSEGEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRW 227 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRD+F ER LE+ F LYRCHTIMNC+++CPK LNP KAIA+IK + Sbjct: 228 MADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLNPGKAIAQIKKDMA 280 >gi|291614297|ref|YP_003524454.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sideroxydans lithotrophicus ES-1] gi|291584409|gb|ADE12067.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sideroxydans lithotrophicus ES-1] Length = 231 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 123/231 (53%), Positives = 169/231 (73%), Gaps = 1/231 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++RIYR+NPD +P M Y + +D M+LD L+ +K + D TL+ R+SCREG+CGS Sbjct: 2 KFRIYRYNPDTDNSPYMQDYDLGMDAGDAMLLDALMQLK-EQDDTLSFRKSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LAC+ + +K I + PLP + VI+DL+VDMS F+ Q+ SI+P+L P Sbjct: 61 AMNINGRNGLACITSLSSLKQPIEIRPLPGLPVIRDLIVDMSQFFKQYHSIKPYLVNNDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS +DR ++DGLYEC++C CC+T+CPS+WWN D+++GPA LLQAYR++ D+RD Sbjct: 121 PPETERLQSPKDRLELDGLYECILCGCCTTACPSFWWNPDKFVGPAGLLQAYRFIADTRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + RLDNLEDP+RL+RCHTIMNC CPK LNP +AI KIK M++ R + Sbjct: 181 QDTAARLDNLEDPYRLFRCHTIMNCVDVCPKELNPTEAIGKIKDMMVKRAV 231 >gi|94311419|ref|YP_584629.1| succinate dehydrogenase iron-sulfur subunit [Cupriavidus metallidurans CH34] gi|93355271|gb|ABF09360.1| succinate dehydrogenase, FeS subunit [Cupriavidus metallidurans CH34] Length = 233 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 175/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+LD M+LD L+ +K K+D T++ RRSCREG+CGS Sbjct: 3 RIFEVYRYDPDKDAAPRMQTYEVELDGHERMLLDALVKLK-KLDETISFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+++ I + PLP + V++DL+VDM++F+ Q+ SI+P+L Sbjct: 62 DAMNINGKNGLACLTNMRELPDRIVLRPLPGLPVVRDLIVDMTNFFKQYNSIKPFLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS ++R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPQERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERLDNL DP+RL+RCH+IMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DQATSERLDNLNDPYRLFRCHSIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|307136313|gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo] Length = 277 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 146/248 (58%), Positives = 181/248 (72%), Gaps = 3/248 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 S + ++ T NLK + IYRWNPD+ P + Y +DL CGPMVLD L+ IKN+ Sbjct: 29 SEAEAQQVEQKATASSNLKTFAIYRWNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNE 88 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 IDP+LT RRSCREGICGSC MNIDG N LAC+ + + + PLPHM VIKDLVVDM Sbjct: 89 IDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI-PSGDSSTITPLPHMFVIKDLVVDM 147 Query: 130 SHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 ++FY+Q++SIEPWLK S P E+LQS +DR K+DG+YEC++CACCSTSCPSYWWN Sbjct: 148 TNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNP 207 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + YLGPA LL A RW+ DSRDE+ ERL+ + D F+LYRCHTI+NC ++CPKGLNP K I Sbjct: 208 ESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQI 267 Query: 248 AKIKMMLL 255 IK + L Sbjct: 268 QHIKSLQL 275 >gi|255954547|ref|XP_002568026.1| Pc21g09900 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589737|emb|CAP95887.1| Pc21g09900 [Penicillium chrysogenum Wisconsin 54-1255] Length = 271 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 142/240 (59%), Positives = 182/240 (75%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ + +K +++YRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 31 PTPSEQPKMKTFKVYRWNPDQPSEKPQMQSYDLDLNKTGPMMLDALIRIKNELDPTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D K +YPLPH V+KDLV DM+HFY Q+ Sbjct: 91 RSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPLPHTYVVKDLVPDMTHFYKQY 150 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ +P + E QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+ Sbjct: 151 KSIKPYLQRDTPTEDGLEFRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAV 210 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ++RWL DSRDE ER L++ +YRCHTI+NCT++CPKGLNP +AIA+IK ML Sbjct: 211 LLQSFRWLADSRDEKTAERKAALDNSMSVYRCHTILNCTRTCPKGLNPGRAIAEIKKMLA 270 >gi|321260805|ref|XP_003195122.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus gattii WM276] gi|317461595|gb|ADV23335.1| Succinate dehydrogenase iron-sulfur subunit, putative [Cryptococcus gattii WM276] Length = 280 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 143/239 (59%), Positives = 179/239 (74%), Gaps = 2/239 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 E +KE++IYRWNPD P + TY VDL CGPM+LD L+ IKN++DPTLT R Sbjct: 39 PVEGKEPQIKEFKIYRWNPDVPNEKPKLQTYKVDLSQCGPMMLDALIKIKNELDPTLTFR 98 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + KD +YPLPHM V+KDLV D++ FY Q+ Sbjct: 99 RSCREGICGSCAMNIDGVNTLACLCRIPKDTSKESKIYPLPHMYVVKDLVPDLTLFYKQY 158 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +SIEP+LK +P E LQS DR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA+L Sbjct: 159 KSIEPYLKNDNPPAKGEFLQSQADRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVL 218 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+ DSRD + ER + +++ LYRCHTI NC+++CPKGLNPA AIAK+K+ + Sbjct: 219 MQAYRWMADSRDSYGAERKEKMQNSMSLYRCHTIFNCSRTCPKGLNPAAAIAKMKLEMA 277 >gi|119897843|ref|YP_933056.1| succinate dehydrogenase iron-sulfur subunit [Azoarcus sp. BH72] gi|119670256|emb|CAL94169.1| probable succinate dehydrogenase, iron-sulfur subunit [Azoarcus sp. BH72] Length = 236 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 124/236 (52%), Positives = 172/236 (72%), Gaps = 1/236 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K +++IYR++PD P M V+L+ +LD ++ +K D TL+ RRSCREG Sbjct: 2 TKRTVQFKIYRYDPDKDEKPYMQDISVELEASDKKLLDAIVRLK-TKDDTLSFRRSCREG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CGS MNI+G N LAC+ D+ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 VCGSDAMNINGKNGLACLTDVDSLEQPITLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P P +E LQ+ EDR++++GLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 121 VNNEPVPERERLQTPEDREELNGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RD+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK M++ R + Sbjct: 181 ADTRDQATNERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKDMMVRRAV 236 >gi|51701403|sp|Q70KF8|DHSB_UROFA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|40644750|emb|CAE02642.1| succinate dehydrogenase [Uromyces viciae-fabae] Length = 283 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 147/241 (60%), Positives = 182/241 (75%), Gaps = 2/241 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ +KE+ IYRWNPD P + TY +DL CGPMVLD L+ IKN++DPTLT R Sbjct: 43 KQPSSAVPVKEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFR 102 Query: 78 RSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC+K K+ + +YPLPHM +IKDLV DM+HFY Q+ Sbjct: 103 RSCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQY 162 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +SIEP+LK +P E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA+L Sbjct: 163 KSIEPFLKNDNPPAQGEFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVL 222 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +QAYRW+ DSRD + +R + L++ LYRCHTI NCT++CPKGLNPAKAI+ IK + Sbjct: 223 MQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPKGLNPAKAISHIKREMAS 282 Query: 257 R 257 Sbjct: 283 A 283 >gi|332970368|gb|EGK09360.1| succinate dehydrogenase iron-sulfur subunit [Kingella kingae ATCC 23330] Length = 254 Score = 257 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 123/234 (52%), Positives = 170/234 (72%), Gaps = 1/234 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++YR+NPD P M Y +++ +LD L+ +K D TL+ RRSCREGIC Sbjct: 22 EKVRFQVYRYNPDRDAAPYMQDYELEILPSDVKLLDALVKLKA-QDDTLSFRRSCREGIC 80 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ + I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 81 GSDGMNINGKNGLACLTDIRSLAQPIVIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 140 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +PKP +E LQS E+R ++DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR++ D Sbjct: 141 DTPKPERERLQSQEERAELDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLNAYRFIAD 200 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L+R + Sbjct: 201 SRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLERAV 254 >gi|241896862|ref|NP_001155908.1| succinate dehydrogenase B [Acyrthosiphon pisum] gi|239799464|dbj|BAH70651.1| ACYPI003519 [Acyrthosiphon pisum] Length = 290 Score = 257 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 146/236 (61%), Positives = 177/236 (75%), Gaps = 3/236 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 +K ++YRWNP+ P M Y VDL++CGPMVLD L+ IKN D TLT RRSC Sbjct: 41 DKAPRIKTVQVYRWNPETPEVKPKMQDYKVDLNSCGPMVLDVLIKIKNSEDSTLTFRRSC 100 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC+ D+ + +YPLPHM V+KDLV DM FY Q+ SI Sbjct: 101 REGICGSCAMNIGGVNTLACISGVNADLSKPLKIYPLPHMYVVKDLVPDMKLFYKQYASI 160 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 EPWL T P KE LQ DR+K+DGLYEC++CACCSTSCPSYWWNS++YLGPA+L+Q Sbjct: 161 EPWLHTDVIPANNKEHLQHTYDREKLDGLYECILCACCSTSCPSYWWNSEKYLGPAVLMQ 220 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 AYRW+IDSRD+ ERLD ++DPF ++RCHTIMNCT++CPKGLNP AIA+IK +L Sbjct: 221 AYRWIIDSRDKATAERLDKMKDPFSVFRCHTIMNCTKTCPKGLNPGGAIARIKSLL 276 >gi|134094981|ref|YP_001100056.1| succinate dehydrogenase iron-sulfur subunit [Herminiimonas arsenicoxydans] gi|133738884|emb|CAL61931.1| succinate dehydrogenase (ubiquinone), Fe-S protein [Herminiimonas arsenicoxydans] Length = 236 Score = 257 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 127/234 (54%), Positives = 170/234 (72%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +IYR++PD P M V+L + M+LD L IK +D TL+LRRSCREG+C Sbjct: 3 RTLRLQIYRYDPDKDAKPYMQDVTVELHDHDKMLLDALQRIKADVDDTLSLRRSCREGVC 62 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS MNI+G N LAC ++ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 63 GSDAMNINGKNGLACTTNLNELTEPIVLRPLPGLPVIRDLIVDMTQFFKQYDSIKPFLIN 122 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + P KE LQ+ +R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR++ D Sbjct: 123 DTIPPEKERLQTPAEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFIAD 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRDE G RLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK +L+ R + Sbjct: 183 SRDEATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELLVRRAV 236 >gi|85116983|ref|XP_965152.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Neurospora crassa OR74A] gi|28926956|gb|EAA35916.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Neurospora crassa OR74A] gi|38567031|emb|CAE76329.1| probable succinate dehydrogenase (ubiquinone) iron-sulfur protein precursor [Neurospora crassa] Length = 282 Score = 257 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 144/234 (61%), Positives = 175/234 (74%), Gaps = 3/234 (1%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK ++IYRWNPD P M +Y +DL+ GPMVLD L+ IKN++DPTLT RRSCREG Sbjct: 48 PKLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMVLDALVRIKNELDPTLTFRRSCREG 107 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+GTNTLAC + D + +YPLPH V+KDLV D++ FY Q++SI+P+ Sbjct: 108 ICGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPY 167 Query: 143 LKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L+ +P KE QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ+YR Sbjct: 168 LQRDTPSPDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYR 227 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 WL DSRDE ER D L + LYRCHTI+NCT++CPKGLNP AIA IK L Sbjct: 228 WLADSRDERTAERKDALNNSMSLYRCHTILNCTRTCPKGLNPGLAIANIKKELA 281 >gi|121713450|ref|XP_001274336.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus clavatus NRRL 1] gi|119402489|gb|EAW12910.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus clavatus NRRL 1] Length = 299 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 143/240 (59%), Positives = 181/240 (75%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ + K++ IYRW+PD P M TY +DL+ GPM+LD L+ IKN+IDPTLT R Sbjct: 58 PNPSEQPRTKKFHIYRWSPDQPSEKPKMQTYTLDLNKTGPMMLDALIRIKNEIDPTLTFR 117 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D K +YPLPH V+KDLV DM++FY Q+ Sbjct: 118 RSCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDMTYFYKQY 177 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 178 KSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 237 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK ML Sbjct: 238 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLA 297 >gi|195345583|ref|XP_002039348.1| GM22932 [Drosophila sechellia] gi|194134574|gb|EDW56090.1| GM22932 [Drosophila sechellia] Length = 440 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 179/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK + IYRW P P TY VDL+ CG MVLD L+ IKN++DPTLT RRSC Sbjct: 184 KAKKPRLKTFEIYRWKP--GDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSC 241 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 242 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSI 301 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + + LQS +DR +DGLYEC++CACC TSCPSYWWNS++YLGPA+L Sbjct: 302 QPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVL 361 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 362 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 420 >gi|288856301|ref|NP_001165802.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Nasonia vitripennis] Length = 276 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 182/237 (76%), Gaps = 4/237 (1%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E +K + IYRWNPD P M Y+V+L+ CGPMVLD L+ IKN+IDPTLT RRSCRE Sbjct: 33 EPKVKTFSIYRWNPDVPEEKPYMQNYHVNLNKCGPMVLDALIKIKNEIDPTLTFRRSCRE 92 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNIDGTNTLAC +YPLPHM +IKDLV DM++FYSQ+ SI+P Sbjct: 93 GICGSCAMNIDGTNTLACISSIDTSSNKTSKIYPLPHMYIIKDLVPDMNNFYSQYSSIKP 152 Query: 142 WLKTV--SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL+ + K+ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QA Sbjct: 153 WLQRKKGNDSGPKQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 212 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 YRWLIDSRD ERL L+DP+ +YRCHTIMNCT++CPKGLNP +AIA+IK +L Sbjct: 213 YRWLIDSRDAAMVERLKKLKDPYSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLAK 269 >gi|57547568|gb|AAW52509.1| succinate dehydrogenase iron sulphur protein [Botryotinia fuckeliana] Length = 300 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 146/251 (58%), Positives = 183/251 (72%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 53 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 108 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 109 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 168 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 169 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 228 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP Sbjct: 229 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPG 288 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 289 LAIAEIKKEMA 299 >gi|34496523|ref|NP_900738.1| succinate dehydrogenase iron-sulfur subunit [Chromobacterium violaceum ATCC 12472] gi|34102377|gb|AAQ58743.1| succinate dehydrogenase iron-sulfur protein [Chromobacterium violaceum ATCC 12472] Length = 236 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 171/232 (73%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++RIYR++PD P M VD+D +LD L+ +K D TL+ RRSCREG+CGS Sbjct: 6 VKFRIYRYDPDKDAKPYMQDISVDMDATEHKLLDALVKLK-TKDDTLSFRRSCREGVCGS 64 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ D + +K I + PLP + V++DL+VDM+ F+ Q+ SI+P++ + Sbjct: 65 DAMNINGKNGLACLTDFRTLKQPIELRPLPGLPVVRDLIVDMAQFFKQYHSIKPYVINDT 124 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E QS EDR+++DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR++ D+R Sbjct: 125 PPPERERRQSPEDRKELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFIADTR 184 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 185 DEATNERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKDLMVKRAV 236 >gi|329903476|ref|ZP_08273495.1| Succinate dehydrogenase iron-sulfur protein [Oxalobacteraceae bacterium IMCC9480] gi|327548351|gb|EGF33036.1| Succinate dehydrogenase iron-sulfur protein [Oxalobacteraceae bacterium IMCC9480] Length = 236 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 128/235 (54%), Positives = 171/235 (72%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + IYR++PD P M V+L + M+LD L IK +D +L LRRSCREG+ Sbjct: 2 PRTLNFEIYRYDPDKDAKPYMQKLTVELQDTDKMLLDALQRIKADVDDSLALRRSCREGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+G N LAC ++K++K I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 62 CGSDAMNINGKNGLACTTNLKELKQPIVLRPLPGLPVIRDLIVDMTQFFKQYNSIKPFLI 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + P KE LQS +R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR++ Sbjct: 122 NTTIPPEKERLQSPTEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFIA 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RDE ERLDNLEDP+RL+RCH+IMNC CPKGLNP KAI KIK M++ R + Sbjct: 182 DTRDEATAERLDNLEDPYRLFRCHSIMNCVDVCPKGLNPNKAIGKIKEMMVRRAV 236 >gi|89573851|gb|ABD77151.1| succinate dehydrogenase complex subunit B [Sus scrofa] Length = 252 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 148/234 (63%), Positives = 182/234 (77%), Gaps = 4/234 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 19 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 78 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 79 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 138 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 139 KSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 198 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT +CPKGLNP KAIA Sbjct: 199 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIA 252 >gi|5217|emb|CAA44612.1| succinate dehydrogenase [Ustilago maydis] gi|164653718|gb|ABY65246.1| CbxR [cloning vector pDonrCbx] Length = 295 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 141/233 (60%), Positives = 180/233 (77%), Gaps = 2/233 (0%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++LK+++IYRWNPD P + +Y +DL+ GPMVLD L+ IKN+IDPTLT RRSCRE Sbjct: 49 PQHLKQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCRE 108 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG NTLAC+ + + +YPLPHM ++KDLV D++ FY Q+RSIEP+ Sbjct: 109 GICGSCAMNIDGVNTLACLCRIDK-QNDTKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPF 167 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 LK+ + E LQS E+R+++DGLYEC++CACCSTSCPSYWWN D YLGPA+L+QAYRW Sbjct: 168 LKSNNTPSEGEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRW 227 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRD+F ER LE+ F LYRC TIMNC+++CPK LNP KAIA+IK + Sbjct: 228 MADSRDDFGEERRQKLENTFSLYRCLTIMNCSRTCPKNLNPGKAIAQIKKDMA 280 >gi|154295833|ref|XP_001548350.1| succinate dehydrogenase-ubiquinone-iron-sulphur protein [Botryotinia fuckeliana B05.10] gi|57547566|gb|AAW52508.1| succinate dehydrogenase iron sulphur protein [Botryotinia fuckeliana] gi|150843836|gb|EDN19029.1| succinate dehydrogenase-ubiquinone-iron-sulphur protein [Botryotinia fuckeliana B05.10] Length = 300 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 146/251 (58%), Positives = 183/251 (72%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 53 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 108 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 109 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 168 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 169 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 228 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP Sbjct: 229 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPG 288 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 289 LAIAEIKKEMA 299 >gi|255089759|ref|XP_002506801.1| succinate dehydrogenase [Micromonas sp. RCC299] gi|226522074|gb|ACO68059.1| succinate dehydrogenase [Micromonas sp. RCC299] Length = 289 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 142/232 (61%), Positives = 185/232 (79%), Gaps = 3/232 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N++E++IYRW+P++ G P TY VD + CGPM+LD L IK++ D +L RRSCREGIC Sbjct: 57 NVQEFQIYRWDPESGGKPRYQTYKVDTNACGPMMLDVLFKIKDEQDNSLAFRRSCREGIC 116 Query: 86 GSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-- 142 GSC MNI+GTNTLAC K K GA + PLPHM V++DLVVDM++FY+Q++S+EP+ Sbjct: 117 GSCAMNINGTNTLACLSKVDKATSGAQKIAPLPHMFVVRDLVVDMANFYAQYKSVEPYLK 176 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +K+ K E +Q+ E+R K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW Sbjct: 177 IKSGDLKKGVEHIQTKEERAKLDGLYECILCACCSTSCPSYWWNQDQYLGPAVLMQAYRW 236 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +IDSRDE+ ERLD + D +L+RCHTIMNC++ CPKGLNPAKAIAK+K M+ Sbjct: 237 IIDSRDEYTEERLDKVNDAMKLFRCHTIMNCSKVCPKGLNPAKAIAKVKTMV 288 >gi|21555840|gb|AAM63946.1| succinate dehydrogenase iron-protein subunit, putative [Arabidopsis thaliana] Length = 279 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 145/231 (62%), Positives = 181/231 (78%), Gaps = 2/231 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCREGI Sbjct: 47 SNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ ++D + PLPHM VIKDLVVDM++FY+Q++SIEPWLK Sbjct: 107 CGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 166 Query: 145 TVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +P PAKE+LQS +DR K+DG+YEC++CAC STSCPSYWW + YLGPA LL A RW Sbjct: 167 RKTPASVPAKEILQSKKDRAKLDGMYECILCACFSTSCPSYWWXPESYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + DSRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 227 ISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277 >gi|156841213|ref|XP_001643981.1| hypothetical protein Kpol_1070p4 [Vanderwaltozyma polyspora DSM 70294] gi|156114613|gb|EDO16123.1| hypothetical protein Kpol_1070p4 [Vanderwaltozyma polyspora DSM 70294] Length = 258 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 148/236 (62%), Positives = 180/236 (76%), Gaps = 3/236 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 LK ++IYRWNPD P + TY VDLDNCGPMVLD LL IK++ DPTLT RRSCREGI Sbjct: 23 KLKTFQIYRWNPDTPSVKPRLQTYQVDLDNCGPMVLDALLKIKDEQDPTLTFRRSCREGI 82 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC K + +YPLPHM V+KDLV D+++FY Q++SI+P+L Sbjct: 83 CGSCAMNIGGINTLACICKIDTNTSKKQKIYPLPHMYVVKDLVPDLTNFYQQYKSIKPYL 142 Query: 144 KTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + PK KE+LQS EDR K+DGLYEC++CACCSTSCPSYWWN + YLGP++L+QAYRW Sbjct: 143 QRKEFPKDGKEILQSQEDRAKLDGLYECILCACCSTSCPSYWWNQEEYLGPSVLMQAYRW 202 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+DSRDE R + L++ LYRCHTIMNCT++CPKGLNP AIA+IK ML + Sbjct: 203 LLDSRDEAGASRKEMLDNSMSLYRCHTIMNCTKTCPKGLNPGVAIAEIKKMLAFEQ 258 >gi|219362603|ref|NP_001136531.1| hypothetical protein LOC100216648 [Zea mays] gi|194696050|gb|ACF82109.1| unknown [Zea mays] Length = 281 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 147/242 (60%), Positives = 176/242 (72%), Gaps = 3/242 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 G + K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT R Sbjct: 40 PEAKGASSTKTFSIYRWDPDSPSTKPHLRDYQVDLSDCGPMVLDALLKIKNEQDPSLTFR 99 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGSC MNIDG N LAC+ + A V PLPHM VIKDLVVDM++FY+Q++ Sbjct: 100 RSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYK 159 Query: 138 SIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 S+EPWLK P P KE+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA Sbjct: 160 SVEPWLKRKDPPPQLGKEVPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAA 219 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LL A RW+ DSRD+F ERLD + D F+LYRCHTI NCT +CPKGLNPAK I IK + L Sbjct: 220 LLHANRWIQDSRDQFTKERLDAINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 279 Query: 256 DR 257 D Sbjct: 280 DA 281 >gi|71908475|ref|YP_286062.1| succinate dehydrogenase iron-sulfur subunit [Dechloromonas aromatica RCB] gi|71848096|gb|AAZ47592.1| succinate dehydrogenase subunit B [Dechloromonas aromatica RCB] Length = 236 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 126/236 (53%), Positives = 171/236 (72%), Gaps = 1/236 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K + ++ IYR++PD P M V+L+ +LD L +K K D ++ RRSCREG Sbjct: 2 SKRMVQFSIYRYDPDKDDAPYMQDISVELEPTDRKLLDALTKLKAK-DDAISYRRSCREG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CGS MNI+G N LAC+ D+ +K I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 VCGSDAMNINGKNGLACLTDIDSLKQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P P +E LQS EDR++++GLYEC++CACCSTSCPS+WWN D+++GPA LL AYR++ Sbjct: 121 INNDPPPERERLQSPEDREELNGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFI 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RD+ ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK M++ R + Sbjct: 181 ADTRDQATNERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKDMMVRRAV 236 >gi|302497787|ref|XP_003010893.1| hypothetical protein ARB_02933 [Arthroderma benhamiae CBS 112371] gi|302653034|ref|XP_003018353.1| hypothetical protein TRV_07643 [Trichophyton verrucosum HKI 0517] gi|291174438|gb|EFE30253.1| hypothetical protein ARB_02933 [Arthroderma benhamiae CBS 112371] gi|291181986|gb|EFE37708.1| hypothetical protein TRV_07643 [Trichophyton verrucosum HKI 0517] Length = 289 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 140/252 (55%), Positives = 176/252 (69%), Gaps = 8/252 (3%) Query: 11 RVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 + +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IKN+ Sbjct: 35 KPTEASSAPTSAPAPKMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNE 94 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D Sbjct: 95 DDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDLVPD 154 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHE------DRQKIDGLYECVMCACCSTSCPS 182 M+ FY Q++SI+P+L+ +P P + E DR+K+DGLYEC++CACCSTSCPS Sbjct: 155 MTQFYKQYKSIKPYLQRDTPSPDLSFKKGRENRQSPADRKKLDGLYECILCACCSTSCPS 214 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 YWWNS+ YLGPA+LLQ+YRWLIDSRDE +R L++ +YRCHTI+NC+++CPKGLN Sbjct: 215 YWWNSEEYLGPALLLQSYRWLIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLN 274 Query: 243 PAKAIAKIKMML 254 P KAIA+IK M+ Sbjct: 275 PGKAIAEIKKMM 286 >gi|45185623|ref|NP_983339.1| ACL065Cp [Ashbya gossypii ATCC 10895] gi|51701412|sp|Q75CI4|DHSB_ASHGO RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|44981341|gb|AAS51163.1| ACL065Cp [Ashbya gossypii ATCC 10895] Length = 261 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 140/239 (58%), Positives = 177/239 (74%), Gaps = 3/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A K ++IYRWNPD P M Y VDL+ CGPMVLD L+ IKN+ DPTLT RR Sbjct: 21 AEVSATRYKSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRR 80 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI G NTLAC K + + +YPLPHM V+KDLV D+++FY Q++ Sbjct: 81 SCREGICGSCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYK 140 Query: 138 SIEPWLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SI+P+L+ P +E LQS DR+K+DGLYEC++CACCST+CPSYWWN+++YLGPA+L Sbjct: 141 SIQPYLQKASKPADGREHLQSIADRKKLDGLYECILCACCSTACPSYWWNNEQYLGPAVL 200 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW++DSRD R + L++ +YRCHTIMNCT++CPKGLNP KAIA+IK L Sbjct: 201 MQAYRWMVDSRDGAGAGRREQLQNAMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKALA 259 >gi|126174729|ref|YP_001050878.1| succinate dehydrogenase iron-sulfur subunit [Shewanella baltica OS155] gi|153001028|ref|YP_001366709.1| succinate dehydrogenase iron-sulfur subunit [Shewanella baltica OS185] gi|160875741|ref|YP_001555057.1| succinate dehydrogenase iron-sulfur subunit [Shewanella baltica OS195] gi|217973012|ref|YP_002357763.1| succinate dehydrogenase iron-sulfur subunit [Shewanella baltica OS223] gi|304409106|ref|ZP_07390727.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|307303109|ref|ZP_07582864.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] gi|125997934|gb|ABN62009.1| succinate dehydrogenase subunit B [Shewanella baltica OS155] gi|151365646|gb|ABS08646.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS185] gi|160861263|gb|ABX49797.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS195] gi|217498147|gb|ACK46340.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS223] gi|304352927|gb|EFM17324.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|306913469|gb|EFN43891.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] gi|315267930|gb|ADT94783.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS678] Length = 235 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 163/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR+NPD P M Y +++ + MVLD L+ +K + DPTL+ RRSCREG+CGS Sbjct: 4 TFAVYRYNPDVDTKPYMQDYTLEVAEGSDMMVLDALIKLK-EQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKAPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|310790958|gb|EFQ26491.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Glomerella graminicola M1.001] Length = 277 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 144/237 (60%), Positives = 177/237 (74%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 T E +K++ IYRWNPD P M Y +DL+ GPM+LD L+ IKN++DPTLT RRSC Sbjct: 40 TKEPEMKKFTIYRWNPDTPTEKPRMQEYTLDLNKTGPMMLDALIRIKNELDPTLTFRRSC 99 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+G NTLAC + K+ I VYPLPH V+KDLV D++ FY Q+RSI Sbjct: 100 REGICGSCAMNINGQNTLACLCRIPKESSSDIKVYPLPHTYVVKDLVPDLTQFYKQYRSI 159 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ +P KE QS DR+K+ GLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ Sbjct: 160 KPYLQRTTPAPDGKEYRQSVADRKKLSGLYECILCACCSTSCPSYWWNSEEYLGPAILLQ 219 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +YRWL DSRDE ER L++ LYRCHTI+NCT++CPKGLNP KAIA+IK + Sbjct: 220 SYRWLADSRDEKSAERKAALDNSMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 276 >gi|302414914|ref|XP_003005289.1| succinate dehydrogenase iron-sulfur subunit [Verticillium albo-atrum VaMs.102] gi|261356358|gb|EEY18786.1| succinate dehydrogenase iron-sulfur subunit [Verticillium albo-atrum VaMs.102] Length = 274 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 144/238 (60%), Positives = 180/238 (75%), Gaps = 2/238 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A T E +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IKN+IDPTLT R Sbjct: 35 PATTPEPKMKSFQIYRWNPDQPTEKPRMQTYTLDLNKTGPMVLDALVRIKNEIDPTLTFR 94 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGSC MNI+G NTLAC+ + + +YPLPH V+KDLV D++ FY Q++ Sbjct: 95 RSCREGICGSCAMNINGQNTLACLCRIPTETPEMKIYPLPHTYVVKDLVPDLTQFYKQYK 154 Query: 138 SIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SI+P+L+ +P KE Q+ DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAIL Sbjct: 155 SIKPYLQRDTPSPDGKEYRQTKADRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 214 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LQ+YRWL DSRDE +GER L++ LYRCHTI+NCT++CPKGLNP AIA+IK + Sbjct: 215 LQSYRWLADSRDERKGERKMALDNSMSLYRCHTILNCTRACPKGLNPGLAIAEIKKQM 272 >gi|39975373|ref|XP_369077.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|58257381|gb|AAW69312.1| succinate dehydrogenase ubiquinone iron-sulfur protein-like protein [Magnaporthe grisea] gi|145018982|gb|EDK03261.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 274 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 144/237 (60%), Positives = 180/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E +K ++IYRW+P P M TY +DL+ GPMVLD L+ IKN++DPTLT RRSC Sbjct: 36 ESESKMKTFQIYRWDPSQPSEKPRMQTYTLDLNKTGPMVLDALVRIKNELDPTLTFRRSC 95 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLAC + + + +YPLPH V+KDLV D++HFY Q+RSI Sbjct: 96 REGICGSCAMNINGTNTLACLCRIPTEASSEVKIYPLPHTYVVKDLVPDLTHFYKQYRSI 155 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ P KE QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ Sbjct: 156 KPYLQRDEPAPDGKEYRQSKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQ 215 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +YRWL DSRD+ + ER L++ LYRCHTI+NCT++CPKGLNPAKAIA+IK + Sbjct: 216 SYRWLADSRDQRKVERRLALDNSMSLYRCHTILNCTRTCPKGLNPAKAIAEIKKEMA 272 >gi|164656867|ref|XP_001729560.1| hypothetical protein MGL_3104 [Malassezia globosa CBS 7966] gi|159103453|gb|EDP42346.1| hypothetical protein MGL_3104 [Malassezia globosa CBS 7966] Length = 288 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 137/239 (57%), Positives = 172/239 (71%), Gaps = 2/239 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K ++IYRW+P+N P M TY +DL+ GPMVLD LL IKN+ D TL R Sbjct: 36 PAAERPSKMKAFKIYRWDPENPAQKPHMKTYNIDLNQTGPMVLDALLKIKNEQDSTLAFR 95 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGSC MNIDG NTLAC+ + +YPLPH V+KDL+ D++ FY Q+R Sbjct: 96 RSCREGICGSCAMNIDGVNTLACLCRIDRDASQSNIYPLPHTHVVKDLIPDLTQFYKQYR 155 Query: 138 SIEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEP+ P +E LQS E+R+ +DGLYEC++CACC+T+CPSYWWN D YLGPA+L Sbjct: 156 SIEPYLKPAGPPPGGREYLQSPEERRHLDGLYECILCACCATACPSYWWNGDAYLGPAVL 215 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+ DSRD ER + LE+ F LYRCHTI NCT++CPKGLNPA+AIA+IK + Sbjct: 216 MQAYRWMADSRDAHGAERRERLENTFSLYRCHTIFNCTRTCPKGLNPARAIAQIKKDMA 274 >gi|152980744|ref|YP_001353199.1| succinate dehydrogenase iron-sulfur subunit [Janthinobacterium sp. Marseille] gi|151280821|gb|ABR89231.1| succinate dehydrogenase iron-sulfur protein [Janthinobacterium sp. Marseille] Length = 236 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 168/234 (71%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +IYR++PD P M V+L + M+LD L IK +D +L LRRSCREG+C Sbjct: 3 RTLRLQIYRYDPDKDAKPYMQDVTVELHDHDKMLLDALQRIKATVDDSLALRRSCREGVC 62 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS MNI+G N LAC ++ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 63 GSDAMNINGKNGLACTTNLNELTEPIVLRPLPGLPVIRDLIVDMTQFFKQYDSIKPFLIN 122 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + P KE LQ+ +R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR++ D Sbjct: 123 DTIPPEKERLQTPAEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFIAD 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD G RLDNLEDP+RL+RCHTIMNC CPKGLNP +AI KIK +++ R + Sbjct: 183 SRDHATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELMVRRAV 236 >gi|300312276|ref|YP_003776368.1| succinate dehydrogenase Fe-S subunit [Herbaspirillum seropedicae SmR1] gi|124483660|emb|CAM32703.1| Succinate dehydrogenase Fe-S protein subunit protein [Herbaspirillum seropedicae] gi|300075061|gb|ADJ64460.1| succinate dehydrogenase Fe-S subunit protein [Herbaspirillum seropedicae SmR1] Length = 236 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 172/235 (73%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +++IYR++PD P M V+L M+LD L IK+ +D +L LRRSCREG+ Sbjct: 2 TRTLKFKIYRYDPDKDDKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+G N LAC+ ++ ++ I + PLP + VI+DL+VDM++F+ Q+ SI+P+L Sbjct: 62 CGSDAMNINGKNGLACITNLNELTEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYLI 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 S P KE LQS E R+++DG+YEC++CACCSTSCPS+WWN D+++GPA LLQAYR++ Sbjct: 122 NDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFIA 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE G RLDNLEDP+RL+RC +IMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DSRDEATGARLDNLEDPYRLFRCRSIMNCVDVCPKGLNPNKAIGKIKELMVRRSV 236 >gi|318087142|gb|ADV40163.1| succinate dehydrogenase iron-sulfur subunit mitochondrial precursor [Latrodectus hesperus] Length = 297 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 149/233 (63%), Positives = 184/233 (78%), Gaps = 4/233 (1%) Query: 26 NLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N+K + IYRW+PDN P M Y VDL+NCGPMVLD L+ IKN++DPTLT RRSCREGI Sbjct: 50 NVKTFSIYRWDPDNPKEKPRMQNYEVDLNNCGPMVLDALIKIKNELDPTLTFRRSCREGI 109 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G NTLAC+ + + +YPLPHM V+KDLV DM++FY Q++SI+PWL Sbjct: 110 CGSCAMNIGGVNTLACICKIDTDVKKVSKIYPLPHMYVVKDLVPDMNNFYQQYKSIQPWL 169 Query: 144 KTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + P K+ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN DRYLGPA+L+QAYR Sbjct: 170 QKKTEEPYGQKQNLQSIEDRKKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQAYR 229 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W+IDSRDE +RLD L DPF +YRCHTIMNCT++CPK LNP +AI ++K +L Sbjct: 230 WVIDSRDEATEKRLDKLRDPFSVYRCHTIMNCTKTCPKSLNPGRAIGELKKLL 282 >gi|303318467|ref|XP_003069233.1| Succinate dehydrogenase iron-sulfur protein,mitochondrial precursor , putative [Coccidioides posadasii C735 delta SOWgp] gi|240108919|gb|EER27088.1| Succinate dehydrogenase iron-sulfur protein,mitochondrial precursor , putative [Coccidioides posadasii C735 delta SOWgp] gi|320039062|gb|EFW20997.1| succinate dehydrogenase iron-sulfur subunit [Coccidioides posadasii str. Silveira] Length = 281 Score = 255 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 145/240 (60%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A + E K + IYRW+PD P M TY +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 40 PASSPEAKNKTFHIYRWDPDRPSEKPRMQTYTIDLNKTGPMMLDALIRIKNEVDPTLTFR 99 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV DM+HFY Q+ Sbjct: 100 RSCREGICGSCAMNIDGVNTLACLCRIPADTAKESRIYPLPHTYVVKDLVPDMTHFYKQY 159 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + KE+ QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 160 KSIKPYLQRETKSPDGKEIRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 219 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL+DSRDE ER L++ +YRCHTIMNCT++CPKGLNP KAIA+IK L Sbjct: 220 LLQSYRWLVDSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKQLA 279 >gi|255572006|ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis] gi|223533696|gb|EEF35431.1| succinate dehydrogenase, putative [Ricinus communis] Length = 284 Score = 255 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 146/248 (58%), Positives = 182/248 (73%), Gaps = 2/248 (0%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 S + K+ + +LK ++IYRWNPDN P + Y +DL CGPMVLD L+ IKN+ Sbjct: 33 SEAEAQKVEPKASSTASLKTFQIYRWNPDNPSKPTLQDYKIDLKECGPMVLDALIKIKNE 92 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 IDPTLT RRSCREGICGSC MNIDG N LAC+ + + + PLPHM VIKDLVVDM Sbjct: 93 IDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGSTSSTITPLPHMFVIKDLVVDM 152 Query: 130 SHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 ++FY+Q++SIEPWLK +P P E+ QS +DR K+DG+YEC++CACCSTSCPSYWWN Sbjct: 153 TNFYNQYKSIEPWLKRKNPPPVDGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWNP 212 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + YLGPA LL A RW+ DSRDE+ ERLD + D F+LYRCHTI+NC ++CPKGLNP K I Sbjct: 213 ESYLGPAALLHANRWISDSRDEYTNERLDAINDEFKLYRCHTILNCARACPKGLNPGKQI 272 Query: 248 AKIKMMLL 255 IK + + Sbjct: 273 MHIKQLQM 280 >gi|223670642|emb|CAT00089.1| succinate dehydrogenase iron-sulfur subunit [Hebeloma cylindrosporum] Length = 270 Score = 255 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 139/233 (59%), Positives = 178/233 (76%), Gaps = 2/233 (0%) Query: 27 LKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +KE++IYRWNPD P ++++ +DL+ GPMVLD L+ IKN++DPTLT RRSCREGIC Sbjct: 38 MKEFKIYRWNPDQPEKKPELESFKIDLNQTGPMVLDALIKIKNEVDPTLTFRRSCREGIC 97 Query: 86 GSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNIDG NTLAC + ++ +YPLPHM V+KDLV DM+ FY Q++SI+PWL+ Sbjct: 98 GSCAMNIDGQNTLACLCRIDREGSKDTKIYPLPHMYVVKDLVPDMTLFYKQYKSIQPWLQ 157 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA L+QAYRWL Sbjct: 158 NDNPPSGTEHLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWLA 217 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD ER + L++ LYRC TI NC+++CPKGLNPA+AIA++K+ L Sbjct: 218 DSRDTNGAERREKLQNEMSLYRCLTIFNCSRTCPKGLNPAQAIAQLKLELATE 270 >gi|19114442|ref|NP_593530.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit [Schizosaccharomyces pombe 972h-] gi|6014967|sp|P21911|DHSB_SCHPO RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|7523471|emb|CAB86412.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit [Schizosaccharomyces pombe] Length = 252 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 139/234 (59%), Positives = 178/234 (76%), Gaps = 1/234 (0%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +NLK + IYRWNP+ P + Y VDL CGPMVLD L+ IKN+ DPTLT RRSCREG Sbjct: 19 ENLKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREG 78 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC MNI+G+NTLAC+ ++K +YPLPH ++KDLV D+++FY Q++SIEPWL Sbjct: 79 ICGSCAMNINGSNTLACICNIKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWL 138 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + KE QS DR K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+L+QAYRW+ Sbjct: 139 QNDNIPKDKEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWI 198 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD+ +RLD +++ +YRCHTIMNC ++CPKGLNP AIAK+K ++ Sbjct: 199 IDSRDQATAKRLDVMQNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVKALMATA 252 >gi|254283226|ref|ZP_04958194.1| succinate dehydrogenase, iron-sulfur subunit [gamma proteobacterium NOR51-B] gi|219679429|gb|EED35778.1| succinate dehydrogenase, iron-sulfur subunit [gamma proteobacterium NOR51-B] Length = 235 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 127/234 (54%), Positives = 165/234 (70%), Gaps = 2/234 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR+NP+ P M + VD + MVLD L IK + D ++T RRSCREG+CG Sbjct: 1 MLQVSIYRYNPETDKAPHMQEFQVDTGDKDLMVLDVLEMIKGEHDSSVTYRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S G+NI+G N LAC+ + + PLP + VI+DL+VDMS FY+Q+ I+P+L+ Sbjct: 61 SDGLNINGKNGLACITPLSEAAPDNKLIIRPLPGLPVIRDLIVDMSLFYAQYEKIQPYLQ 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ EDR+K+DGLYEC++CACCSTSCPS+WWN DR++GPA LLQAYR+L Sbjct: 121 NNTPAPAIERLQTPEDREKLDGLYECILCACCSTSCPSFWWNPDRFVGPAGLLQAYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERL NL+DPF ++RCH I NC CPKGLNP KAI I+ MLL+R Sbjct: 181 DSRDTATEERLSNLDDPFSVFRCHGIQNCVNVCPKGLNPTKAIGHIRNMLLNRA 234 >gi|303283560|ref|XP_003061071.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457422|gb|EEH54721.1| predicted protein [Micromonas pusilla CCMP1545] Length = 295 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 142/235 (60%), Positives = 178/235 (75%), Gaps = 4/235 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 NL+E++IYRW+P+ G P TY VD + CGPM+LD L IK++ D +L+ RRSCREG Sbjct: 57 PSNLQEFQIYRWDPETGGKPRYQTYKVDTNACGPMMLDVLFKIKDEQDNSLSFRRSCREG 116 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNIDG NTLAC K K + + PLPHM V++DLVVDM++FY+Q++SIEP+ Sbjct: 117 ICGSCAMNIDGVNTLACLCKVDKSSDAPLKIAPLPHMFVVRDLVVDMANFYAQYKSIEPY 176 Query: 143 LKTVSPKPA---KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 L+T E QS EDR K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA+L+QA Sbjct: 177 LQTADGSEVLKGTEYHQSKEDRAKLDGLYECILCACCSTSCPSYWWNSDQYLGPAVLMQA 236 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD ERLD + D +L+RCHTIMNC++ CPK LNPA AIAK+K M+ Sbjct: 237 YRWIIDSRDGKTEERLDKVNDAMKLFRCHTIMNCSKVCPKSLNPAHAIAKVKAMV 291 >gi|11466549|ref|NP_044798.1| succinate:ubiquinone oxidoreductase subunit 2 [Reclinomonas americana] gi|1706426|sp|P80480|DHSB_RECAM RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip gi|2258379|gb|AAD11913.1| succinate:ubiquinone oxidoreductase subunit 2 [Reclinomonas americana] Length = 239 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 154/233 (66%), Positives = 191/233 (81%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 T ++ + +++YRWNPD K P + TY VDL++CGPMVLD L+ IKN+ D TLT RRSCR Sbjct: 3 TKKEKIMLFKVYRWNPDKKEKPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCR 62 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EG+CGSC MNIDGTNTLAC+K + K + +YPLPHM +IKDLV D+S+FY+Q++SIEP Sbjct: 63 EGVCGSCAMNIDGTNTLACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEP 122 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 W+KT K KE QS DR+K+DGLYECV+CACCSTSCPSYWWNSD+YLGPA+LLQAYR Sbjct: 123 WMKTTEKKLDKEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W++DSRD+ ERL LEDPF+LYRCHTI+NCT++CPK LNPA+AIAKIK + Sbjct: 183 WIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIKQNI 235 >gi|119181244|ref|XP_001241858.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Coccidioides immitis RS] Length = 281 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 145/240 (60%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A + E K + IYRW+PD P M TY +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 40 PASSPEAKNKTFHIYRWDPDRPSEKPRMQTYTIDLNKTGPMMLDALIRIKNEVDPTLTFR 99 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV DM+HFY Q+ Sbjct: 100 RSCREGICGSCAMNIDGVNTLACLCRIPTDAAKESRIYPLPHTYVVKDLVPDMTHFYKQY 159 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + KE+ QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 160 KSIKPYLQRETKSPDGKEIRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 219 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL+DSRDE ER L++ +YRCHTIMNCT++CPKGLNP KAIA+IK L Sbjct: 220 LLQSYRWLVDSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKQLA 279 >gi|58269758|ref|XP_572035.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus neoformans var. neoformans JEC21] gi|134113797|ref|XP_774483.1| hypothetical protein CNBG1290 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257121|gb|EAL19836.1| hypothetical protein CNBG1290 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228271|gb|AAW44728.1| succinate dehydrogenase iron-sulfur subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 280 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 140/239 (58%), Positives = 179/239 (74%), Gaps = 2/239 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + +KE++IYRWNPD P + TY +DL CGPM+LD L+ IKN++DPTLT R Sbjct: 39 PVEGKQPPIKEFKIYRWNPDVPNEKPKLQTYKIDLSQCGPMMLDALIKIKNELDPTLTFR 98 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + KD +YPLPHM V+KDLV D++HFY Q+ Sbjct: 99 RSCREGICGSCAMNIDGVNTLACLCRIPKDTSKDSKIYPLPHMYVVKDLVPDLTHFYKQY 158 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++IEP+LK +P E LQS DR+K+DG+YEC++CACCS SCPSYWWN D YLGPA+L Sbjct: 159 KAIEPYLKNDNPPEKGEFLQSQADRKKLDGMYECILCACCSASCPSYWWNQDEYLGPAVL 218 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+ DSRD + ER + +++ LYRCHTI NC+++CPKGLNPA AIAK+K+ + Sbjct: 219 MQAYRWMADSRDSYGAERKEKMQNAMSLYRCHTIFNCSRTCPKGLNPAAAIAKMKLEMA 277 >gi|221065939|ref|ZP_03542044.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Comamonas testosteroni KF-1] gi|264679528|ref|YP_003279435.1| succinate dehydrogenase and fumarate reductase [Comamonas testosteroni CNB-2] gi|299530387|ref|ZP_07043810.1| succinate dehydrogenase and fumarate reductase [Comamonas testosteroni S44] gi|220710962|gb|EED66330.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Comamonas testosteroni KF-1] gi|262210041|gb|ACY34139.1| succinate dehydrogenase and fumarate reductase [Comamonas testosteroni CNB-2] gi|298721612|gb|EFI62546.1| succinate dehydrogenase and fumarate reductase [Comamonas testosteroni S44] Length = 234 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 127/233 (54%), Positives = 175/233 (75%), Gaps = 2/233 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD L+ +K +DP++ RRSCREG+CGS Sbjct: 3 RTFKIYRYDPDKDAKPYMQTVQVELDGHERMLLDALVKLKA-MDPSIAFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV- 146 MNI+G N LAC+ +M +KG I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L++ Sbjct: 62 DAMNINGKNGLACLTNMNTLKGDIVLKPLPGLPVIRDLIVDMTQFFKQYHSIKPYLQSDV 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P+KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 YASPSKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD GERLDNLEDP+RL+RCHTIMNC CPK LNP AI KIK +++ R + Sbjct: 182 RDTATGERLDNLEDPYRLFRCHTIMNCVDVCPKHLNPTAAIGKIKELMVRRTV 234 >gi|330820915|ref|YP_004349777.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia gladioli BSR3] gi|327372910|gb|AEA64265.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia gladioli BSR3] Length = 233 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 177/232 (76%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY ++L M+LD L+ +K ++D TL+ RRSCREG+CGS Sbjct: 4 RIFELYRYDPDKDAAPRMQTYELELT-HERMLLDALVKLK-EVDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ ++ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNELPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPFLINDT 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R+++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEEREELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|78062996|ref|YP_372904.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia sp. 383] gi|77970881|gb|ABB12260.1| succinate dehydrogenase subunit B [Burkholderia sp. 383] Length = 233 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 176/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY ++L+ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELELE-HERMLLDALVKLKA-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|158285891|ref|XP_308512.4| AGAP007309-PA [Anopheles gambiae str. PEST] gi|157020207|gb|EAA45422.4| AGAP007309-PA [Anopheles gambiae str. PEST] Length = 290 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 149/232 (64%), Positives = 180/232 (77%), Gaps = 7/232 (3%) Query: 30 YRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++IYRWNPD P TY VDL CGPMVLD L+ IKN++DPTLT RRSCREGICGSC Sbjct: 40 FQIYRWNPDKPEEKPYNQTYEVDLSACGPMVLDALIKIKNEMDPTLTFRRSCREGICGSC 99 Query: 89 GMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 MNI GTNTLAC+ + +YPLPHM V+KDLV DM++FY+Q+RSI+PWL+ Sbjct: 100 AMNIGGTNTLACISKIDADNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 159 Query: 147 SPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K + LQS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW Sbjct: 160 NESTEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 219 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +IDSRDE RLD L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 220 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLL 271 >gi|50427539|ref|XP_462382.1| DEHA2G19382p [Debaryomyces hansenii CBS767] gi|49658052|emb|CAG90889.1| DEHA2G19382p [Debaryomyces hansenii] Length = 263 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 142/240 (59%), Positives = 183/240 (76%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + E +K+++IYRWNPD P M+TY VDL+ CGPMVLD ++ IKN+ D TLT R Sbjct: 22 TSANAETRMKKFQIYRWNPDTPEVEPKMNTYEVDLNQCGPMVLDAIIKIKNEQDATLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC + +D + +YPLPHM V++DLV D++HFY Q+ Sbjct: 82 RSCREGICGSCAMNIGGRNTLACLCRIEEDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQY 141 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + P+ +E LQS EDR K+DGLYEC++CACCST+CPSYWWN +YLGPA+ Sbjct: 142 KSIQPYLQRDTHPEDGRENLQSIEDRAKLDGLYECILCACCSTACPSYWWNQQQYLGPAV 201 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+QAYRWLIDSRD+ R + L++ LYRCHTIMNC+++CPKGLNP KAIA+IK L Sbjct: 202 LMQAYRWLIDSRDQASRARKEMLQNSMSLYRCHTIMNCSRTCPKGLNPGKAIAEIKKQLA 261 >gi|238024244|ref|YP_002908476.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia glumae BGR1] gi|237878909|gb|ACR31241.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia glumae BGR1] Length = 233 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 176/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY V+L M+LD L+ +K +ID TL+ RRSCREG+CGS Sbjct: 4 RIFELYRYDPDKDAAPRMQTYEVELK-HERMLLDALVKLK-EIDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+ F++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPERIVLRPLPGLPVVRDLIVDMTQFFNQYHSIKPFLINGT 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R+++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEEREELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DEATAERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|119774563|ref|YP_927303.1| succinate dehydrogenase iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119767063|gb|ABL99633.1| succinate dehydrogenase subunit B [Shewanella amazonensis SB2B] Length = 235 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 130/233 (55%), Positives = 165/233 (70%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y D+ D MVLD LL +K +IDPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDTKPRMQDYSFDVPDGSDMMVLDALLKLK-EIDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 GMN++G N LAC+ + K I + PLP M V++DLVVD+S FY Q+ I+P+L Sbjct: 63 DGMNMNGKNGLACITPISTFKGKKIEIRPLPGMPVVRDLVVDLSQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 KPA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKKPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFVGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLAELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|221128855|ref|XP_002165357.1| PREDICTED: similar to Sdhb-prov protein [Hydra magnipapillata] Length = 265 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 145/241 (60%), Positives = 188/241 (78%), Gaps = 3/241 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + +K ++IYRWNP+ G P + Y VDL+ CGPMVLD LL +KN+ DPTLT RR Sbjct: 24 QTSASSAVKVFQIYRWNPEKPGDKPRLQEYEVDLNKCGPMVLDALLAVKNEQDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI+GTNTLAC K ++ +YPLPHM V+KDLV DM++FY Q+R Sbjct: 84 SCREGICGSCAMNINGTNTLACTCKIDANLSKKTKIYPLPHMYVVKDLVPDMTNFYEQYR 143 Query: 138 SIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEP+LK + P KE +QS +DR K+DGLYEC++CACCSTSCPSYWW+S++YLGPA+L Sbjct: 144 YIEPYLKRNTLPADGKENIQSIKDRAKLDGLYECILCACCSTSCPSYWWHSEKYLGPAVL 203 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +QAYRW+IDSRDEF+ ERL+ L++ + +Y+CHTIMNCT++CPKGLNP AI ++K M+L Sbjct: 204 MQAYRWIIDSRDEFKKERLEKLDNEYSIYKCHTIMNCTRTCPKGLNPGLAIGEVKKMILQ 263 Query: 257 R 257 + Sbjct: 264 K 264 >gi|89573843|gb|ABD77147.1| succinate dehydrogenase complex subunit B [Diceros bicornis] Length = 257 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 146/232 (62%), Positives = 179/232 (77%), Gaps = 4/232 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 22 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 142 KSIEPYLKKKDESQQGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KA Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPGKA 253 >gi|82701989|ref|YP_411555.1| succinate dehydrogenase iron-sulfur subunit [Nitrosospira multiformis ATCC 25196] gi|82410054|gb|ABB74163.1| succinate dehydrogenase subunit B [Nitrosospira multiformis ATCC 25196] Length = 231 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 127/231 (54%), Positives = 172/231 (74%), Gaps = 1/231 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR++PD P M Y + L+ M+LD L+ IK +D +L+LRRSCREG+CGS Sbjct: 2 KFSIYRFDPDKDEKPYMQNYEITLEPADRMLLDALIRIK-TVDDSLSLRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LAC+ +K ++ + + PLP + VI+DL+VDM+ F+ Q+ SI+P+L P Sbjct: 61 AMNINGRNGLACITPVKGLREPVELRPLPGLPVIRDLIVDMTQFFKQYHSIKPYLINDDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS E+R ++DGLYEC++CACCST+CPS+WWN D+Y+GPA LLQAYR+L DSRD Sbjct: 121 PPETERLQSPEERAELDGLYECILCACCSTACPSFWWNPDKYVGPAGLLQAYRFLADSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ERLD LEDP+RL+RCH+IMNCT CPKGLNP +AI++IK M+ R I Sbjct: 181 QATAERLDYLEDPYRLFRCHSIMNCTDVCPKGLNPMEAISRIKTMMTKRTI 231 >gi|312217155|emb|CBX97104.1| similar to succinate dehydrogenase iron-sulfur protein subunit [Leptosphaeria maculans] Length = 306 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 141/240 (58%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 PT + K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 65 PEPTKDAKTKTFHIYRWNPDEPSSKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR 124 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDLV DM+ FY Q+ Sbjct: 125 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQY 184 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 RS++P+L+ +P +E Q+ EDR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+ Sbjct: 185 RSVKPYLQRTTPAPDGREYRQTKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAV 244 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRW+ DSRDE + ER D L + LYRCHTI+NC+++CPKGLNPA AIA+IK + Sbjct: 245 LLQSYRWIADSRDERKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304 >gi|50286849|ref|XP_445854.1| hypothetical protein [Candida glabrata CBS 138] gi|49525160|emb|CAG58773.1| unnamed protein product [Candida glabrata] Length = 256 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 143/237 (60%), Positives = 178/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 T LK ++IYRWNPD P + + VDL+ CGPMVLD LL IK++ D +LT RRSC Sbjct: 19 TEAPRLKTFKIYRWNPDQPEVKPKLQEFKVDLNECGPMVLDALLKIKDEQDASLTFRRSC 78 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC K +D +YPLPHM ++KDLV D+++FY Q++SI Sbjct: 79 REGICGSCAMNIGGRNTLACLCKIDQDTSKQAKIYPLPHMFIVKDLVPDLTNFYQQYKSI 138 Query: 140 EPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ P KE+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+L+Q Sbjct: 139 KPYLQRKDYPADGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQ 198 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRWL+DSRD+ ER D L + LYRCHTIMNCT++CPKGLNP ++IAKIK L Sbjct: 199 AYRWLVDSRDQATQERKDMLNNSMSLYRCHTIMNCTKTCPKGLNPGESIAKIKQQLA 255 >gi|145353844|ref|XP_001421210.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581447|gb|ABO99503.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 256 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 143/233 (61%), Positives = 184/233 (78%), Gaps = 3/233 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N++++R+YRW+PD+ P TY VD ++CGPM+LD L IK++ D TL+ RRSCREGIC Sbjct: 24 NVQQFRVYRWDPDSGDEPKYKTYDVDTNDCGPMMLDVLFKIKDEQDQTLSFRRSCREGIC 83 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-- 142 GSC MNI+G N LAC+ ++ + + PLPHM V++DLVVDM++FY+Q++SIEP+ Sbjct: 84 GSCAMNINGRNGLACLTKVEKTEKGAQTIAPLPHMFVVRDLVVDMANFYAQYKSIEPFLK 143 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 K+ +P E LQ+ EDR K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA+LLQAYRW Sbjct: 144 TKSDAPANGAERLQTKEDRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLQAYRW 203 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +IDSRDEF ERL N+ D F+LYRCHTIMNC++ CPKGLNPA IAKIK M+ Sbjct: 204 IIDSRDEFTEERLANVNDAFKLYRCHTIMNCSKVCPKGLNPALKIAKIKQMVA 256 >gi|256822759|ref|YP_003146722.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kangiella koreensis DSM 16069] gi|256796298|gb|ACV26954.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kangiella koreensis DSM 16069] Length = 232 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 122/231 (52%), Positives = 160/231 (69%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR+NP+ P M Y +++ M++ L DPTL+ RRSCREG+CGS Sbjct: 2 KFSIYRYNPETDKKPYMQEYDLEVPEGSDMMVLDALVALKDQDPTLSFRRSCREGVCGSD 61 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GMNI+G N LAC+ + +K I V PLP + V++DLVVDM+ FY Q+ I+P+L Sbjct: 62 GMNINGKNGLACITSLSSLKTPIVVRPLPGLPVVRDLVVDMAQFYKQYEKIKPFLIANDE 121 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 PAKE LQS EDR K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+LIDSRD Sbjct: 122 PPAKERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFLIDSRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERL +L+D + ++RC IMNC CPKGLNP +AI I+ MLL + Sbjct: 182 TQTEERLADLDDAYSVFRCRGIMNCVDVCPKGLNPTRAIGHIRSMLLKSGV 232 >gi|224824510|ref|ZP_03697617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lutiella nitroferrum 2002] gi|224603003|gb|EEG09179.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lutiella nitroferrum 2002] Length = 234 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 126/234 (53%), Positives = 172/234 (73%), Gaps = 1/234 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + IYR++PD P M Y V++ +LD ++ +K +D TL+ RRSCREGIC Sbjct: 2 KKMRFSIYRYDPDKDAKPYMQDYEVEIGPNDVKLLDVIVKLK-TMDDTLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS MNI+G N LAC+ D+ D+ I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDAMNINGKNGLACITDIADLAEPITLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 SP+P +E LQS EDR+++DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR++ D Sbjct: 121 DSPRPERERLQSPEDRKELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFIAD 180 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +RDE ERLDNLEDP+RL+RCH+IMNC CPKGLNP KAI KIK +++ R + Sbjct: 181 TRDEATSERLDNLEDPYRLFRCHSIMNCVDVCPKGLNPTKAIGKIKDLMVRRAV 234 >gi|330929240|ref|XP_003302561.1| hypothetical protein PTT_14436 [Pyrenophora teres f. teres 0-1] gi|311321967|gb|EFQ89326.1| hypothetical protein PTT_14436 [Pyrenophora teres f. teres 0-1] Length = 306 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 143/251 (56%), Positives = 182/251 (72%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S V+ +P+ + K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 58 KTSTVQE----PSPSKDAKTKTFHIYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRI 113 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDL Sbjct: 114 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDL 173 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q+RS++P+L+ + +E QS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 174 VPDMTLFYKQYRSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYW 233 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WN + YLGPA+LLQ+YRW+ DSRDE + ER D L + LYRCHTI+NC+++CPKGLNPA Sbjct: 234 WNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPA 293 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 294 LAIAEIKKSMA 304 >gi|195481535|ref|XP_002101683.1| GE17763 [Drosophila yakuba] gi|194189207|gb|EDX02791.1| GE17763 [Drosophila yakuba] Length = 425 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 138/239 (57%), Positives = 178/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K + IYRW P P TY VDL+ CG MVLD L+ IK ++DPTLT RRSC Sbjct: 169 KAKKPRMKTFEIYRWKP--GDQPQTQTYSVDLEQCGAMVLDALIKIKTELDPTLTFRRSC 226 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 227 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSI 286 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + + LQS +DR +DGLYEC++CACC T+CPSYWWNS++YLGPA+L Sbjct: 287 QPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTACPSYWWNSNKYLGPAVL 346 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 347 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 405 >gi|83717349|ref|YP_438562.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis E264] gi|167615043|ref|ZP_02383678.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis Bt4] gi|257141619|ref|ZP_05589881.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis E264] gi|83651174|gb|ABC35238.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis E264] Length = 235 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 172/235 (73%), Gaps = 1/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N + + I+R++PD P M Y +++ M+LD L+ +K D TL+ RRSCREG+ Sbjct: 2 SNTRTFEIFRYDPDRDAKPYMQAYEIEVPAGDRMLLDVLVRLKA-QDETLSFRRSCREGV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+ N LAC+ ++ D+ + PLP + V++DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 CGSDAMNINRKNGLACITNLNDLPRHTVLRPLPGLPVVRDLIVDMTAFFKQYHSIKPYLI 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P +E QS E+R ++DG YEC++CACCS++CPSYWWN D+Y+GPA LLQAYR+L+ Sbjct: 121 NDTPPPERERRQSPEERDQLDGFYECILCACCSSACPSYWWNPDKYVGPAGLLQAYRFLV 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE GERLDNL+DP+RL+RC TI+NCT CPKGLNPA+AI++I+ ML R I Sbjct: 181 DSRDEGTGERLDNLDDPYRLFRCRTILNCTDVCPKGLNPARAISEIRTMLARRTI 235 >gi|189193841|ref|XP_001933259.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978823|gb|EDU45449.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 306 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 140/240 (58%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +P+ + K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 65 PSPSKDAKTKTFHIYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR 124 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDLV DM+ FY Q+ Sbjct: 125 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQY 184 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 RS++P+L+ + +E QS EDR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+ Sbjct: 185 RSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAV 244 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRW+ DSRDE + ER D L + LYRCHTI+NC+++CPKGLNPA AIA+IK + Sbjct: 245 LLQSYRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304 >gi|196006904|ref|XP_002113318.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190583722|gb|EDV23792.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 273 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 145/238 (60%), Positives = 183/238 (76%), Gaps = 3/238 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +K++ IYRW+PD+ P M Y VDL CGPMVLDGL+ IKN+IDPTLT RRSCREG Sbjct: 35 PERMKKFSIYRWSPDDNTRPKMQEYNVDLSTCGPMVLDGLIKIKNEIDPTLTFRRSCREG 94 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC+ + + +YPLPHM V+KDLVVDM++FY Q+R IEP+ Sbjct: 95 ICGSCSMNIGGINTLACLSKIDPDLSKPVKIYPLPHMYVVKDLVVDMNNFYDQYRGIEPY 154 Query: 143 --LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 K + ++L QS EDR+K+DGLYEC++CACCSTSCPSYWW+ D+YLGPA+L+QAY Sbjct: 155 LKRKKDTTIGQEQLHQSVEDRKKLDGLYECILCACCSTSCPSYWWHPDKYLGPAVLMQAY 214 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRDEF ERL+ L++ F +Y+CHTIMNCT++CPKGLNP AI +IK L + Sbjct: 215 RWMIDSRDEFTQERLEKLDNAFSVYKCHTIMNCTKTCPKGLNPGLAIGEIKKKLATYR 272 >gi|319426668|gb|ADV54742.1| succinate dehydrogenase, iron-sulfur protein, SdhB [Shewanella putrefaciens 200] Length = 235 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 165/233 (70%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ D MVLD L+ +K + DPTL+ RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSIEVADGSDMMVLDALIKLK-EQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKRPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|56435063|gb|AAV91323.1| succinate dehydrogenase iron-sulfur protein [Schistosoma japonicum] gi|56757549|gb|AAW26938.1| SJCHGC06829 protein [Schistosoma japonicum] gi|226470530|emb|CAX70545.1| succinate dehydrogenase complex, subunit B, iron sulfur [Schistosoma japonicum] gi|226470532|emb|CAX70546.1| succinate dehydrogenase complex, subunit B, iron sulfur [Schistosoma japonicum] gi|226470534|emb|CAX70547.1| succinate dehydrogenase complex, subunit B, iron sulfur [Schistosoma japonicum] gi|226470536|emb|CAX70548.1| succinate dehydrogenase complex, subunit B, iron sulfur [Schistosoma japonicum] gi|226487080|emb|CAX75405.1| succinate dehydrogenase complex, subunit B, iron sulfur [Schistosoma japonicum] Length = 278 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 143/243 (58%), Positives = 175/243 (72%), Gaps = 6/243 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K + IYRWNPD P M Y VDL++CGPMVLD L+ IKN+ D TLT R Sbjct: 21 TASELAPRIKTFSIYRWNPDKPGEKPSMQNYQVDLNDCGPMVLDALIKIKNEQDSTLTFR 80 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G N LAC+ ++ +YPLPHM VIKDL+ DM++FY+Q+ Sbjct: 81 RSCREGICGSCAMNIGGRNHLACIWEIDQDVSKPTKIYPLPHMYVIKDLIPDMNNFYAQY 140 Query: 137 RSIEPWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R IEP+LK + QS EDR K+DGLYEC++CACCSTSCPSYWWN D+YLG Sbjct: 141 RFIEPYLKKKNVTEEDIGKKTYYQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDKYLG 200 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+LLQAYRWL+DSRD++ ERL ++ + LYRCHTIMNCT++CPKGLNP AI +IK Sbjct: 201 PAVLLQAYRWLVDSRDDYTYERLSEFQNKWSLYRCHTIMNCTETCPKGLNPGLAIGEIKK 260 Query: 253 MLL 255 ML+ Sbjct: 261 MLI 263 >gi|326429657|gb|EGD75227.1| succinate dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 262 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 144/231 (62%), Positives = 182/231 (78%), Gaps = 2/231 (0%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K++ IYRW+P+ G P TY +DL++CGPMVLD L+ IKN++DPTLT RRSCREGIC Sbjct: 31 MKKFSIYRWDPEKPGDKPHQQTYEIDLNDCGPMVLDALIKIKNEVDPTLTFRRSCREGIC 90 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC MNIDGTN LAC+ + + + PLPHM V+KDLV DM++FY Q+++IEPWL+T Sbjct: 91 GSCSMNIDGTNNLACLCPITRDGSEMKIRPLPHMYVVKDLVPDMTNFYQQYKAIEPWLQT 150 Query: 146 -VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P+ KE LQS DR+K+DG+YEC++CACCSTSCPSYWWN D+YLGPA L+QA RW+ Sbjct: 151 SKQPEDGKEFLQSIADRKKLDGMYECILCACCSTSCPSYWWNGDKYLGPAALMQARRWMA 210 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRDE + ER+D L DPF +YRCHTIMNCT++CPK LNP KAIA+IK + Sbjct: 211 DSRDERKTERMDRLRDPFSMYRCHTIMNCTKACPKHLNPGKAIAEIKRDMA 261 >gi|107026774|ref|YP_624285.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia cenocepacia AU 1054] gi|116692034|ref|YP_837567.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia cenocepacia HI2424] gi|170702915|ref|ZP_02893756.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria IOP40-10] gi|170735973|ref|YP_001777233.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia cenocepacia MC0-3] gi|171316066|ref|ZP_02905292.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria MEX-5] gi|206562825|ref|YP_002233588.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia cenocepacia J2315] gi|254248721|ref|ZP_04942041.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Burkholderia cenocepacia PC184] gi|254253643|ref|ZP_04946960.1| Succinate dehydrogenase/fumarate reductase [Burkholderia dolosa AUO158] gi|105896148|gb|ABF79312.1| succinate dehydrogenase subunit B [Burkholderia cenocepacia AU 1054] gi|116650034|gb|ABK10674.1| succinate dehydrogenase subunit B [Burkholderia cenocepacia HI2424] gi|124875222|gb|EAY65212.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Burkholderia cenocepacia PC184] gi|124898288|gb|EAY70131.1| Succinate dehydrogenase/fumarate reductase [Burkholderia dolosa AUO158] gi|169818161|gb|ACA92743.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia cenocepacia MC0-3] gi|170132174|gb|EDT00661.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria IOP40-10] gi|171098768|gb|EDT43561.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria MEX-5] gi|198038865|emb|CAR54827.1| succinate dehydrogenase iron-sulfur protein [Burkholderia cenocepacia J2315] Length = 233 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|148908652|gb|ABR17434.1| unknown [Picea sitchensis] Length = 275 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 142/238 (59%), Positives = 181/238 (76%), Gaps = 2/238 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K + IYRWNPD+ P ++ Y ++ CGPMVLD L+ IK++ DP+LT RRSCREG Sbjct: 38 ASKPKTFSIYRWNPDHTEKPRLENYTINTKECGPMVLDALIKIKSETDPSLTFRRSCREG 97 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G N LAC+ ++ + + PLPHM V+KDLVVDM++FY+Q++SIEPW Sbjct: 98 ICGSCAMNINGCNGLACLTKIEVASDSATTITPLPHMFVVKDLVVDMTNFYNQYKSIEPW 157 Query: 143 LKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 LK +P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN ++YLGPA LL A R Sbjct: 158 LKRKTPPQDGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPAALLHANR 217 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W+ DSRDE+ ERLD + D F+LYRCHTIMNCT++CPKGLNPAK IA IK + + R I Sbjct: 218 WISDSRDEYTEERLDAVTDEFKLYRCHTIMNCTRACPKGLNPAKEIAHIKKIGMARAI 275 >gi|323450717|gb|EGB06597.1| hypothetical protein AURANDRAFT_69875 [Aureococcus anophagefferens] Length = 280 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 145/244 (59%), Positives = 183/244 (75%), Gaps = 9/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 +N+K ++IYRW+P+ G P TY VDLD+CGPMVLD L+ IK + +P LT RRSC Sbjct: 35 QSSENIKYFKIYRWDPEVPGQKPYTSTYPVDLDDCGPMVLDALIKIKAEQEPGLTFRRSC 94 Query: 81 REGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 REGICGSC MNI+GTNTLAC+ + + + PLPHM VIKDLV DM++FY Q Sbjct: 95 REGICGSCAMNINGTNTLACLCYITAPGESKSEKPVTINPLPHMYVIKDLVADMTNFYDQ 154 Query: 136 HRSIEPWLKTVSPKP---AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +RSI+PWL+T +E LQS DR+K+DG+YEC++CACCSTSCPSYWWN+D YLG Sbjct: 155 YRSIKPWLRTKEEHDLGKGEEHLQSVVDRKKLDGMYECILCACCSTSCPSYWWNADSYLG 214 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+L+QAYRW+ DSRDEF+ ERL L+D F+LYRCHTIMNC+++CPK LNP KAI +IK Sbjct: 215 PAVLMQAYRWIEDSRDEFREERLAELDDAFKLYRCHTIMNCSKTCPKHLNPGKAIGEIKK 274 Query: 253 MLLD 256 + D Sbjct: 275 AIAD 278 >gi|120598555|ref|YP_963129.1| succinate dehydrogenase iron-sulfur subunit [Shewanella sp. W3-18-1] gi|120558648|gb|ABM24575.1| succinate dehydrogenase subunit B [Shewanella sp. W3-18-1] Length = 235 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 164/233 (70%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ D MVLD L+ +K + DPTL+ RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSIEVADGSDMMVLDALIKLK-EQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKMPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|254572495|ref|XP_002493357.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) [Pichia pastoris GS115] gi|238033155|emb|CAY71178.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) [Pichia pastoris GS115] Length = 267 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 143/237 (60%), Positives = 177/237 (74%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK +++YRW+PD P M Y +DL+ CGPMVLD LL IKN+ D TLT RRSC Sbjct: 29 QNQPRLKSFKVYRWSPDTPEIKPHMQEYKIDLNECGPMVLDALLKIKNEQDATLTFRRSC 88 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC K ++ + +YPLPHM V++DLV D++HFY Q++SI Sbjct: 89 REGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPLPHMFVVRDLVPDLTHFYKQYKSI 148 Query: 140 EPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ S P KE LQS EDR+K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+Q Sbjct: 149 QPFLQRDSVPSDGKENLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLMQ 208 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRWLIDSRD+ R + L++ LYRCHTIMNC ++CPKGLNP KAIA+IK L Sbjct: 209 AYRWLIDSRDQASVARKEMLQNSMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 265 >gi|167583945|ref|ZP_02376333.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia ubonensis Bu] Length = 233 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 175/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +DL M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELDL-QHERMLLDALVKLKA-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS ++R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPQERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|169864529|ref|XP_001838873.1| succinate dehydrogenase iron-sulfur subunit [Coprinopsis cinerea okayama7#130] gi|116500093|gb|EAU82988.1| succinate dehydrogenase iron-sulfur subunit [Coprinopsis cinerea okayama7#130] gi|168488020|gb|ACA25433.1| succinate dehydrogenase [Coprinopsis cinerea] Length = 266 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 178/233 (76%), Gaps = 2/233 (0%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 LKE++IYRWNPD P +++Y +DL+ GPM+LD L+ IKN++DPTLT RRSCREGIC Sbjct: 34 LKEFKIYRWNPDKPEEKPKLESYKIDLNQTGPMILDALIKIKNEVDPTLTFRRSCREGIC 93 Query: 86 GSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNIDG NTLAC + ++ +YPLPHM ++KDLV DM+ FY Q++SI+PWL+ Sbjct: 94 GSCAMNIDGQNTLACLCRIDRNASKDTKIYPLPHMYIVKDLVPDMTQFYKQYKSIQPWLQ 153 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P E LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ Sbjct: 154 NDNPPEKGEHLQSPEDRKKLDGLYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIA 213 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD ER D L++ +YRCHTI NC+++CPKGLNPA AIAKIK+ L Sbjct: 214 DSRDTHTEERKDRLQNEMSMYRCHTIFNCSRTCPKGLNPAAAIAKIKLELAAE 266 >gi|294651216|ref|ZP_06728544.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter haemolyticus ATCC 19194] gi|292822869|gb|EFF81744.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter haemolyticus ATCC 19194] Length = 236 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYNKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ +DGLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPLKERLQSQEEREHLDGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATQERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|146293366|ref|YP_001183790.1| succinate dehydrogenase iron-sulfur subunit [Shewanella putrefaciens CN-32] gi|145565056|gb|ABP75991.1| succinate dehydrogenase subunit B [Shewanella putrefaciens CN-32] Length = 235 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 164/233 (70%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ D MVLD L+ +K + DPTL+ RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSLEVADGSDMMVLDALIKLK-EQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKMPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|226951559|ref|ZP_03822023.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter sp. ATCC 27244] gi|226837701|gb|EEH70084.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter sp. ATCC 27244] Length = 236 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYNKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ +DGLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSQEEREHLDGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATQERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|169632623|ref|YP_001706359.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii SDF] gi|169794945|ref|YP_001712738.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AYE] gi|184159277|ref|YP_001847616.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii ACICU] gi|213157650|ref|YP_002320448.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB0057] gi|215482492|ref|YP_002324678.1| Succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB307-0294] gi|239502286|ref|ZP_04661596.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB900] gi|260557311|ref|ZP_05829527.1| succinate dehydrogenase/fumarate reductase [Acinetobacter baumannii ATCC 19606] gi|301346636|ref|ZP_07227377.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB056] gi|301512214|ref|ZP_07237451.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB058] gi|301595939|ref|ZP_07240947.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB059] gi|332854234|ref|ZP_08435254.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6013150] gi|332866323|ref|ZP_08436928.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6013113] gi|332872538|ref|ZP_08440507.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6014059] gi|169147872|emb|CAM85735.1| succinate dehydrogenase, iron-sulfur subunit [Acinetobacter baumannii AYE] gi|169151415|emb|CAP00146.1| succinate dehydrogenase, iron-sulfur subunit [Acinetobacter baumannii] gi|183210871|gb|ACC58269.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Acinetobacter baumannii ACICU] gi|193078180|gb|ABO13127.2| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii ATCC 17978] gi|213056810|gb|ACJ41712.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB0057] gi|213988004|gb|ACJ58303.1| Succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii AB307-0294] gi|260409417|gb|EEX02719.1| succinate dehydrogenase/fumarate reductase [Acinetobacter baumannii ATCC 19606] gi|332728159|gb|EGJ59547.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6013150] gi|332734671|gb|EGJ65775.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6013113] gi|332739224|gb|EGJ70082.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii 6014059] Length = 236 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 167/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC++++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLQNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ ++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATAERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|24373493|ref|NP_717536.1| succinate dehydrogenase iron-sulfur subunit [Shewanella oneidensis MR-1] gi|24347793|gb|AAN54980.1|AE015636_4 succinate dehydrogenase, iron-sulfur protein [Shewanella oneidensis MR-1] Length = 235 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 163/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ D MVLD L+ +K K DPTL RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSLEVADGTDMMVLDALIKLKEK-DPTLVFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGLNMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +PA+E LQS E R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 DKQPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|161521188|ref|YP_001584615.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|161522863|ref|YP_001585792.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|189348302|ref|YP_001941498.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|189352636|ref|YP_001948263.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|221196965|ref|ZP_03570012.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD2M] gi|221203638|ref|ZP_03576656.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD2] gi|221212433|ref|ZP_03585410.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD1] gi|160345238|gb|ABX18323.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|160346416|gb|ABX19500.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|189336658|dbj|BAG45727.1| succinate dehydrogenase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|189338440|dbj|BAG47508.1| succinate dehydrogenase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|221167532|gb|EEE00002.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD1] gi|221175804|gb|EEE08233.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD2] gi|221183519|gb|EEE15919.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia multivorans CGD2M] Length = 233 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELEIK-HERMLLDALVKLKA-LDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|320165276|gb|EFW42175.1| succinate dehydrogenase iron-sulfur subunit [Capsaspora owczarzaki ATCC 30864] Length = 285 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 155/236 (65%), Positives = 186/236 (78%), Gaps = 4/236 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 LK + IYRW+P+N P + Y VDL+ CGPMVLD L+ IKN IDPTLT RRSCREGI Sbjct: 50 RLKTFAIYRWDPENPTVKPRLQNYQVDLNTCGPMVLDALIKIKNDIDPTLTFRRSCREGI 109 Query: 85 CGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G+NTLAC+ + + +YPLPHM V+KDLV DMS+FY Q+R IEP+L Sbjct: 110 CGSCSMNIGGSNTLACISHIDPDLSKPVKIYPLPHMYVVKDLVPDMSNFYQQYRRIEPYL 169 Query: 144 KTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +P P KE LQS DR+K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA+L+QAYR Sbjct: 170 QRKTPAPDAAKENLQSRADRKKLDGLYECILCACCSTSCPSYWWNSDQYLGPAVLMQAYR 229 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 W+IDSRDEF+ ERL L+DPF LYRCHTIMNCT++CPKGLNPA+AIA IK L + Sbjct: 230 WIIDSRDEFKAERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPARAIAMIKKELANA 285 >gi|239993977|ref|ZP_04714501.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii ATCC 27126] gi|332141296|ref|YP_004427034.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551318|gb|AEA98036.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 236 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 165/233 (70%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NP+ P M Y ++++ M++ L + DPTL+ RRSCREG+CGS Sbjct: 4 TFSIYRYNPEVDAKPRMQDYTLEVEEGQDMMVLDALLALKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ KG I V PLP + V++DLVVDM+ FY+Q+ I+P+L S Sbjct: 64 GVNMNGKNGLACITPLSALGKGKIVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDS 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDS Sbjct: 124 KQPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL++L+D F ++RCH IMNC CPKGLNP KAI +IK MLL R + Sbjct: 184 RDTATEERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGQIKSMLLQRAV 236 >gi|167576870|ref|ZP_02369744.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis TXDOH] Length = 235 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 171/235 (72%), Gaps = 1/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N + + I+R++PD P M Y +++ M+LD L+ +K D TL+ RRSCREG+ Sbjct: 2 SNTRTFEIFRYDPDRDAKPYMQAYEIEVPAGDRMLLDVLVRLKA-QDETLSFRRSCREGV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+ N LAC+ ++ D+ + PLP + V++DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 CGSDAMNINRKNGLACITNLNDLPRHTVLRPLPGLPVVRDLIVDMTAFFKQYHSIKPYLI 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + P +E QS E+R ++DG YEC++CACCS++CPSYWWN D+Y+GPA LLQAYR+L+ Sbjct: 121 NDTAPPERERRQSPEERDQLDGFYECILCACCSSACPSYWWNPDKYVGPAGLLQAYRFLV 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE GERLDNL+DP+RL+RC TI+NCT CPKGLNPA+AI++I+ ML R I Sbjct: 181 DSRDEGTGERLDNLDDPYRLFRCRTILNCTDVCPKGLNPARAISEIRTMLARRTI 235 >gi|115358065|ref|YP_775203.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia ambifaria AMMD] gi|115283353|gb|ABI88869.1| succinate dehydrogenase subunit B [Burkholderia ambifaria AMMD] Length = 233 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKA-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|223997572|ref|XP_002288459.1| precursor of hydrogenase [Thalassiosira pseudonana CCMP1335] gi|220975567|gb|EED93895.1| precursor of hydrogenase [Thalassiosira pseudonana CCMP1335] Length = 240 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 144/240 (60%), Positives = 187/240 (77%), Gaps = 9/240 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K ++IYRW+PD++ P + TY VDL++CGPMVLD L+ IK++ DPTLT RRSCREGICG Sbjct: 1 IKYFKIYRWDPDHRQKPYLSTYPVDLNDCGPMVLDALIKIKSEQDPTLTFRRSCREGICG 60 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA-------IAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 SC MNI+G NTLAC+ ++D + + +YPLPHM V+KDLV DM +FY Q+RSI Sbjct: 61 SCAMNINGRNTLACLCYIEDKEKKGSSGGDVMKIYPLPHMYVLKDLVPDMGNFYEQYRSI 120 Query: 140 EPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EPWL+T + E LQ+ EDR K+DG+YEC++CACCST+CPSYWWN+D+YLGPA+L+ Sbjct: 121 EPWLQTKDGKAEGQAEYLQTREDRAKLDGMYECILCACCSTACPSYWWNADKYLGPAVLM 180 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QAYRW+ DSRD+F +RL L+D F+LYRCHTIMNC++ CPK LNP KAIA IK L ++ Sbjct: 181 QAYRWIEDSRDDFTDKRLAELDDAFKLYRCHTIMNCSKVCPKHLNPGKAIAHIKKKLAEK 240 >gi|195627854|gb|ACG35757.1| succinate dehydrogenase iron-sulfur protein,mitochondrial precursor [Zea mays] Length = 282 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 143/235 (60%), Positives = 174/235 (74%), Gaps = 3/235 (1%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + + K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCRE Sbjct: 43 DSSTKTFSIYRWDPDSPSTKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCRE 102 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GICGSC MNIDG N LAC+ + A V PLPHM V+KDLVVDM++FYSQ++S+EPW Sbjct: 103 GICGSCAMNIDGDNGLACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPW 162 Query: 143 LKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK P + E+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 163 LKRKDQPPQQGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHAN 222 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RW+ DSRD+F ERLD + D F+LYRCHTI NCT +CPKGLNPAK I IK + L Sbjct: 223 RWIQDSRDQFTKERLDAINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 277 >gi|114775453|ref|ZP_01451021.1| succinate dehydrogenase catalytic subunit [Mariprofundus ferrooxydans PV-1] gi|114553564|gb|EAU55945.1| succinate dehydrogenase catalytic subunit [Mariprofundus ferrooxydans PV-1] Length = 236 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 132/234 (56%), Positives = 165/234 (70%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + ++R++P+ P M Y V L G +LD L YIK K+D TLT RRSC EG+ Sbjct: 2 SEMIKLSVFRYDPEKDDKPFMQAYEVPLSGSGMKLLDALNYIKWKLDGTLTYRRSCGEGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS G+NI+G N LAC+ + +K I V PLP M VI+DLVVDM HF+ Q+R I+PWLK Sbjct: 62 CGSDGLNINGINGLACITPIAGLKQPIHVRPLPGMEVIRDLVVDMDHFFDQYRQIQPWLK 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P P E LQ+ R ++DG YEC++C CC+TSCPS+WWN DR+LGPA LLQA RW++ Sbjct: 122 TTTPVPEHERLQTPGQRAELDGQYECILCGCCTTSCPSWWWNGDRFLGPATLLQANRWIV 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE GERLD LED FRLYRCH IMNC ++CPK LNP AI IK +L RK Sbjct: 182 DSRDEAMGERLDQLEDAFRLYRCHQIMNCMEACPKDLNPTAAIDNIKRKILARK 235 >gi|225678182|gb|EEH16466.1| succinate dehydrogenase iron-sulfur subunit [Paracoccidioides brasiliensis Pb03] Length = 296 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 140/262 (53%), Positives = 176/262 (67%), Gaps = 17/262 (6%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+ + LK ++IYRWNPD P M Y +DL+ GPM+LD L+ IKN Sbjct: 34 SKTAESPTHTT-SQTPKLKTFKIYRWNPDKPTEKPRMQNYALDLNKTGPMMLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTSKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKE--------------LLQSHEDRQKIDGLYECVMC 173 DM++FY Q++SI+P+L+ +P P + QS DR+K+DGLYEC++C Sbjct: 153 DMTYFYKQYKSIKPYLQRDTPSPDVHANGPALTHPLQGREIRQSPADRKKLDGLYECILC 212 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 ACCSTSCPSYWWNS YLGPA+LLQ+YRWL DSRDE ER L++ +YRCHTI+NC Sbjct: 213 ACCSTSCPSYWWNSQEYLGPALLLQSYRWLADSRDEKTEERKAALDNSMSVYRCHTILNC 272 Query: 234 TQSCPKGLNPAKAIAKIKMMLL 255 +++CPKGLNP AIA+IK M+ Sbjct: 273 SRTCPKGLNPGLAIAEIKKMMA 294 >gi|157125918|ref|XP_001660815.1| succinate dehydrogenase [Aedes aegypti] gi|108873481|gb|EAT37706.1| succinate dehydrogenase [Aedes aegypti] Length = 289 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 151/232 (65%), Positives = 180/232 (77%), Gaps = 7/232 (3%) Query: 30 YRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++IYRWNPD P TY VDL CGPMVLD L+ IKN+IDPTLT RRSCREGICGSC Sbjct: 39 FQIYRWNPDKPEQKPYNQTYEVDLSACGPMVLDALIKIKNEIDPTLTFRRSCREGICGSC 98 Query: 89 GMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 MNI GTNTLAC+ + VYPLPHM V+KDLV DM++FY+Q+RSI+PWL+ Sbjct: 99 AMNIGGTNTLACISKIDADNLDKPTKVYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 158 Query: 147 SP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K + LQS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW Sbjct: 159 NEAGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +IDSRDE RLD L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 219 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLL 270 >gi|320581799|gb|EFW96018.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) [Pichia angusta DL-1] Length = 253 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 141/237 (59%), Positives = 176/237 (74%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + LK ++IYRW+PD P M Y +DL+ CGPMVLD ++ IKN+ D TLT RRSC Sbjct: 15 ATAQRLKTFKIYRWSPDTPDKKPYMQEYKIDLNQCGPMVLDAIIKIKNEQDATLTFRRSC 74 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC K +D +YPLPHM +++DLV D++HFY Q++SI Sbjct: 75 REGICGSCAMNIGGQNTLACLCKIDQDTSKETKIYPLPHMYIVRDLVPDLTHFYKQYKSI 134 Query: 140 EPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+T + KE LQS EDR+K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+Q Sbjct: 135 QPYLQTKNKPADGKENLQSEEDRKKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLMQ 194 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRWL+DSRDE R + L++ LYRCHTIMNC ++CPKGLNP KAIA+IK L Sbjct: 195 AYRWLVDSRDEATKSRKEMLQNSMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 251 >gi|89573837|gb|ABD77144.1| succinate dehydrogenase complex subunit B [Felis catus] Length = 253 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 146/232 (62%), Positives = 180/232 (77%), Gaps = 4/232 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 22 TAAATAPRIKKFAIYRWDPDKTGDKPRMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 142 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KA Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKA 253 >gi|169786051|ref|XP_001827486.1| succinate dehydrogenase (ubiquinone) iron-sulfur subunit [Aspergillus oryzae RIB40] gi|238506985|ref|XP_002384694.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus flavus NRRL3357] gi|83776234|dbj|BAE66353.1| unnamed protein product [Aspergillus oryzae] gi|220689407|gb|EED45758.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative [Aspergillus flavus NRRL3357] Length = 278 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 138/240 (57%), Positives = 177/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 37 PNPSETPRTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALIRIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ FY Q+ Sbjct: 97 RSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQY 156 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 157 KSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 216 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK ++ Sbjct: 217 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKLMA 276 >gi|195174646|ref|XP_002028083.1| GL21331 [Drosophila persimilis] gi|194115823|gb|EDW37866.1| GL21331 [Drosophila persimilis] Length = 375 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 145/252 (57%), Positives = 182/252 (72%), Gaps = 6/252 (2%) Query: 11 RVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 + G T EK +K + IYRW P P M TY +DL CG MVLD L+ IKN++ Sbjct: 110 KKVAGPPAPPKTKEKRIKNFEIYRWQP--GEQPKMQTYAIDLSQCGAMVLDALIKIKNEV 167 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM 129 D TLT RRSCREGICGSC MNIDGTNTLACV + +YPLPH+ V++DLV D+ Sbjct: 168 DQTLTFRRSCREGICGSCAMNIDGTNTLACVTPIDQSTSGSCRIYPLPHLYVVRDLVPDL 227 Query: 130 SHFYSQHRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 S FY Q+RSI+PWL+ + + + LQS EDR K+DGLYEC++CACC TSCPSYWWN Sbjct: 228 SQFYEQYRSIQPWLQRNNIQNEMGKAQYLQSLEDRNKLDGLYECILCACCQTSCPSYWWN 287 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 SD+YLGPA+L+QA+RW+IDSRDE +RL L+DP++LYRCHTI+NCT +CPK LNPA+A Sbjct: 288 SDKYLGPAVLMQAFRWVIDSRDEATEQRLCFLQDPWKLYRCHTILNCTNTCPKNLNPARA 347 Query: 247 IAKIKMMLLDRK 258 I ++K +L K Sbjct: 348 IIQLKQLLSGAK 359 >gi|56479261|ref|YP_160850.1| succinate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] gi|56315304|emb|CAI09949.1| Succinate dehydrogenase iron-sulfur protein [Aromatoleum aromaticum EbN1] Length = 236 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 124/236 (52%), Positives = 173/236 (73%), Gaps = 1/236 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K + ++YR++PD P M Y ++L+ +LD L+ +K+K D TL+ RRSCREG Sbjct: 2 SKRTVKLKMYRYDPDKDDKPYMQDYTLELEPSDKKLLDALVRLKSK-DDTLSFRRSCREG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CGS MNI+G N LAC+ D+ + I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 VCGSDAMNINGKNGLACLTDIDGLPQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P P +E LQS E+R++++GLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 121 INETPLPERERLQSPEEREELNGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RDE ERLDNLEDP+RL+RCH+IMNC CPK LNP +AI KIK M++ R + Sbjct: 181 ADTRDEATTERLDNLEDPYRLFRCHSIMNCVDVCPKNLNPTRAIGKIKDMMVSRAV 236 >gi|113969974|ref|YP_733767.1| succinate dehydrogenase iron-sulfur subunit [Shewanella sp. MR-4] gi|117920156|ref|YP_869348.1| succinate dehydrogenase iron-sulfur subunit [Shewanella sp. ANA-3] gi|113884658|gb|ABI38710.1| succinate dehydrogenase subunit B [Shewanella sp. MR-4] gi|117612488|gb|ABK47942.1| succinate dehydrogenase subunit B [Shewanella sp. ANA-3] Length = 235 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 162/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ + MVLD L+ +K + DPTL RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSLEVAEGSDMMVLDALIKLK-EQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKMPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|298710615|emb|CBJ32043.1| SDH2, succinate dehydrogenase subunit 2 [Ectocarpus siliculosus] Length = 280 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 143/229 (62%), Positives = 183/229 (79%), Gaps = 2/229 (0%) Query: 28 KEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 K ++IYRW+P + P M TY +D D+CGPMVLD L+ IKN+ DPTLT RRSCREGICG Sbjct: 49 KTFKIYRWDPNEKDQKPYMKTYPIDRDDCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 108 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK-T 145 SC MNI+G NTLAC+ +++ + +YPLPHM V KDLV DM++FY Q++SIEPWLK Sbjct: 109 SCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTK 168 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P E LQS +DR+K+DG+YEC++CACCSTSCPSYWWN+D+YLGPA+L+QAYRW+ D Sbjct: 169 KDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDD 228 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 SRD++ ERL++L+D F+L+RCHTIMNCT++CPK LNP KAIA IK + Sbjct: 229 SRDDYTKERLESLDDAFKLFRCHTIMNCTKTCPKHLNPGKAIANIKKRV 277 >gi|315051400|ref|XP_003175074.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma gypseum CBS 118893] gi|311340389|gb|EFQ99591.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma gypseum CBS 118893] Length = 284 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 141/232 (60%), Positives = 176/232 (75%), Gaps = 3/232 (1%) Query: 26 NLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IKN+ DPTLT RRSCREGI Sbjct: 50 KMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGI 109 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNIDG NTLAC + D +YPLPH V+KDLV DM+ FY Q++SI+P+L Sbjct: 110 CGSCAMNIDGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYL 169 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +P +E QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+LLQ+YRW Sbjct: 170 QRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRW 229 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LIDSRDE +R L++ +YRCHTI+NC+++CPKGLNP KAIA+IK M+ Sbjct: 230 LIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMM 281 >gi|50307957|ref|XP_453977.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643112|emb|CAG99064.1| KLLA0E00683p [Kluyveromyces lactis] Length = 254 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 144/250 (57%), Positives = 182/250 (72%), Gaps = 3/250 (1%) Query: 9 RSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIK 67 + +KRG A LK ++IYRW+PD P + Y VDL+ CGPMVLD L+ IK Sbjct: 3 NAIIKRGLATEAKAVAPRLKTFKIYRWSPDRPAEKPRLQEYQVDLNQCGPMVLDALIKIK 62 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLV 126 N+ D TLT RRSCREGICGSC MNI G NTLAC+ + + +YPLPHM +++DLV Sbjct: 63 NEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDQNENKQTKIYPLPHMYIVRDLV 122 Query: 127 VDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 D++HFY Q++SI+P+L+ P KE LQS DR+K+DGLYEC++CACCSTSCPSYWW Sbjct: 123 PDLTHFYKQYKSIQPYLQRSEVPADGKENLQSIADRKKLDGLYECILCACCSTSCPSYWW 182 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 N ++YLGPA+L+QAYRWL+DSRDE G R L++ LYRCHTIMNCT++CPKGLNP + Sbjct: 183 NQEQYLGPAVLMQAYRWLVDSRDEAAGIRKQMLQNSMSLYRCHTIMNCTRTCPKGLNPGR 242 Query: 246 AIAKIKMMLL 255 AIA+IK L Sbjct: 243 AIAEIKKALA 252 >gi|262371933|ref|ZP_06065212.1| succinate dehydrogenase/fumarate reductase [Acinetobacter junii SH205] gi|262311958|gb|EEY93043.1| succinate dehydrogenase/fumarate reductase [Acinetobacter junii SH205] Length = 236 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 129/232 (55%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYNKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P PAKE LQS DR+ +DGLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPAKERLQSQADREHLDGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATQERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|302689769|ref|XP_003034564.1| Iron-sulfur subunit protein of succinate dehydrogenase [Schizophyllum commune H4-8] gi|300108259|gb|EFI99661.1| Iron-sulfur subunit protein of succinate dehydrogenase [Schizophyllum commune H4-8] Length = 271 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 144/240 (60%), Positives = 182/240 (75%), Gaps = 3/240 (1%) Query: 21 PTGEK-NLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT + KE++IYRWNPD P + +Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 32 PTDKPVKAKEFKIYRWNPDEPAKKPTLQSYTIDLNQCGPMVLDALIKIKNEIDPTLTFRR 91 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI+G NTLAC + +D +YPLPHM ++KDLV D+++FY Q++ Sbjct: 92 SCREGICGSCAMNINGQNTLACLCRIERDESKDTKIYPLPHMYIVKDLVPDLTYFYKQYK 151 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 SI+P+L+ +P E LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA L+ Sbjct: 152 SIQPYLQNDNPPAEGEFLQSQEDRRKLDGLYECILCACCSTSCPSYWWNQDQYLGPATLM 211 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QAYRWL DSRD + +R + L++ +YRCHTI NC ++CPKGLNPA AIAKIKM L Sbjct: 212 QAYRWLADSRDSYGAQRRERLQNEMSVYRCHTIFNCARTCPKGLNPAAAIAKIKMELAAE 271 >gi|218659068|ref|ZP_03514998.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli IE4771] Length = 223 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 181/223 (81%), Positives = 205/223 (91%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTN 96 PD+ NP +DT+Y+D+D+CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTN Sbjct: 1 PDDGQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTN 60 Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 TLAC K + DIKGA+ VYPLPHM V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE Q Sbjct: 61 TLACTKGLDDIKGAVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQ 120 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 SHEDRQK+DGLYEC++CACCSTSCPSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLD Sbjct: 121 SHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLD 180 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +LEDPFRLYRCHTIMNC Q+CPKGLNPAKAIA+IK M+++R++ Sbjct: 181 DLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMMVERRV 223 >gi|187929588|ref|YP_001900075.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12J] gi|309781632|ref|ZP_07676366.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] gi|187726478|gb|ACD27643.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ralstonia pickettii 12J] gi|308919607|gb|EFP65270.1| succinate dehydrogenase iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] Length = 235 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 174/235 (74%), Gaps = 1/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + + +YR++PD+ P M + V+L M+LD L+++K D TL+ RRSCREG+ Sbjct: 2 SDTRVFEVYRYDPDSDVQPYMQAFNVELKPDDRMLLDVLIHLKA-QDQTLSFRRSCREGV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+G N LAC ++ + I + PLP + VI+DL+VDM+ F+ Q++SI+P+L Sbjct: 61 CGSDAMNINGKNGLACTTNLNALPRHIVLRPLPGLPVIRDLIVDMTDFFKQYQSIKPYLI 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + P +E LQS ++R ++DGLYEC++CACCS++CPSYWWN D+Y+GPA LLQAYR+L+ Sbjct: 121 NDTAPPERERLQSPQERDQLDGLYECILCACCSSACPSYWWNPDKYVGPAGLLQAYRFLV 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE RLDNL+DP+RL+RC TIMNCT CPKGLNPAKAI++I+ ML R I Sbjct: 181 DSRDEATAARLDNLDDPYRLFRCRTIMNCTNVCPKGLNPAKAISEIRNMLARRAI 235 >gi|114047209|ref|YP_737759.1| succinate dehydrogenase iron-sulfur subunit [Shewanella sp. MR-7] gi|113888651|gb|ABI42702.1| succinate dehydrogenase subunit B [Shewanella sp. MR-7] Length = 235 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 163/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++ + MVLD L+ +K ++DPTL RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSLEVAEGSDMMVLDALIKLK-ELDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKMPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|325192671|emb|CCA27092.1| unnamed protein product [Albugo laibachii Nc14] Length = 270 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 147/237 (62%), Positives = 187/237 (78%), Gaps = 2/237 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 K +K ++YRW+P++K P + TY V+++ CGPMVLD L IK + DPTLT RRSCR Sbjct: 33 NKTKEIKYLKVYRWDPESKSKPYISTYPVNINECGPMVLDALFKIKYEQDPTLTFRRSCR 92 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNIDG NTLAC+ ++ KG I +YPLPHM V++DLV DM++FY Q+RSI+ Sbjct: 93 EGICGSCAMNIDGGNTLACLSPLRKNKGDVIKIYPLPHMYVMRDLVPDMNNFYDQYRSIK 152 Query: 141 PWLKTVSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 PWL++ S K + E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN ++YLGPA+LLQA Sbjct: 153 PWLQSDSNKASNVEHLQSKEDRKKLDGMYECILCACCSTSCPSYWWNPEKYLGPAVLLQA 212 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +RW+ DSRD ERL+ L D F+LY+CHTIMNCT++CPKGLNPAKAIA+IK L Sbjct: 213 FRWIEDSRDSRTKERLEYLNDSFKLYKCHTIMNCTRTCPKGLNPAKAIAQIKKRLAK 269 >gi|115401250|ref|XP_001216213.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114190154|gb|EAU31854.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 278 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 139/240 (57%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ + +K + +YRWNPD P M Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 37 PVPSAQPRMKTFHVYRWNPDKPAEKPTMQAYSLDLNKTGPMMLDALIRIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ FY Q+ Sbjct: 97 RSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQY 156 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + P+ E QS EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 157 KSIKPYLQNDTKPEDGLEYRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 216 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRD ER L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK M+ Sbjct: 217 LLQSYRWLADSRDLKTAERKAALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMMA 276 >gi|241958672|ref|XP_002422055.1| succinate dehydrogenase, iron-sulfur protein subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223645400|emb|CAX40056.1| succinate dehydrogenase, iron-sulfur protein subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 263 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 149/239 (62%), Positives = 179/239 (74%), Gaps = 3/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A LK+++IYRWNPD P M TY VDL+ CGPMVLD LL IKN+ D TLTLRR Sbjct: 23 AAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRR 82 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI G NTLAC + +D + VYPLPHM V++DLV D++HFY Q++ Sbjct: 83 SCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYK 142 Query: 138 SIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEP+L+ +P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+L Sbjct: 143 SIEPYLQRDSNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVL 202 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRWLIDSRD+ R L++ LYRCHTIMNC ++CPKGLNP KAIA+IK L Sbjct: 203 MQAYRWLIDSRDQATANRKAMLQNSMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 261 >gi|194892765|ref|XP_001977726.1| GG19200 [Drosophila erecta] gi|190649375|gb|EDV46653.1| GG19200 [Drosophila erecta] Length = 412 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 140/239 (58%), Positives = 178/239 (74%), Gaps = 6/239 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K + IYRW P P TY VDL+ CG MVLD L+ IKN++DPTLT RRSC Sbjct: 156 KAKKPRMKSFEIYRWKP--GDQPQTQTYLVDLEQCGAMVLDALIKIKNEMDPTLTFRRSC 213 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLACV + + +YPLPH+ V++DLV DMS FY Q+RSI Sbjct: 214 REGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYEQYRSI 273 Query: 140 EPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +PWL+ + LQS +DR +DGLYEC++CACC TSCPSYWWNS++YLGPA+L Sbjct: 274 QPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVL 333 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE +RLD L+DP++LYRCH+IMNCT +CPK LNPA+AI ++K +L+ Sbjct: 334 MQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 392 >gi|320591824|gb|EFX04263.1| succinate dehydrogenase iron-sulfur mitochondrial precursor [Grosmannia clavigera kw1407] Length = 289 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 138/235 (58%), Positives = 176/235 (74%), Gaps = 2/235 (0%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 +K ++IYRW+PD P M+TY +DL+ GPM+LD L+ IKN+ D +LT RRSC Sbjct: 53 EPAPLIKTFQIYRWSPDKPTEKPHMETYSLDLNKTGPMMLDALIRIKNEQDSSLTFRRSC 112 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 REGICGSC MNI+G NTLAC+ + VYPLPH V+KDLV D++H Y Q++SI+ Sbjct: 113 REGICGSCAMNINGVNTLACLCRIPRDTTEAKVYPLPHTYVVKDLVPDLTHLYKQYKSIK 172 Query: 141 PWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P+L+ +P KE LQS EDR+K+DGLYEC++C CCSTSCPSYWWNS+ YLGPAILLQ+ Sbjct: 173 PYLQRTTPAPDGKEYLQSKEDRKKLDGLYECILCFCCSTSCPSYWWNSEEYLGPAILLQS 232 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRWL DSRDE + ERL ++ LYRCHTI+NCT++CPKGLNP +AIA+IK + Sbjct: 233 YRWLADSRDEKKAERLQYFQNSMSLYRCHTILNCTRTCPKGLNPGRAIAEIKKQM 287 >gi|89573847|gb|ABD77149.1| succinate dehydrogenase complex subunit B [Balaenoptera physalus] Length = 257 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 147/232 (63%), Positives = 180/232 (77%), Gaps = 4/232 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 21 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 80 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 81 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 140 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 141 KSIEPYLKKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 200 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT +CPKGLNP KA Sbjct: 201 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTNTCPKGLNPGKA 252 >gi|3334166|sp|O42772|DHSB_MYCGR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|2801670|gb|AAB97419.1| succinate dehydrogenase iron-sulphur protein [Mycosphaerella graminicola] Length = 297 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 143/251 (56%), Positives = 178/251 (70%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK + K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 48 KTSTVKE----PQMDADAKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRI 103 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDL Sbjct: 104 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDL 163 Query: 126 VVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q++SI+P+L+ + P KE QS DR+K+DGLYEC++CACCSTSCPSYW Sbjct: 164 VPDMTQFYKQYKSIKPYLQRDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYW 223 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPA+LLQ+YRW+ DSRDE +R D L + LYRCHTI+NC+++CPKGLNPA Sbjct: 224 WNSEEYLGPAVLLQSYRWINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPA 283 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 284 LAIAEIKKSMA 294 >gi|293610898|ref|ZP_06693197.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826550|gb|EFF84916.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 236 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D +LT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDESLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ ++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATADRLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|260549004|ref|ZP_05823226.1| succinate dehydrogenase/fumarate reductase [Acinetobacter sp. RUH2624] gi|260408172|gb|EEX01643.1| succinate dehydrogenase/fumarate reductase [Acinetobacter sp. RUH2624] Length = 236 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 167/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC++++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLQNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ ++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATADRLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|255318873|ref|ZP_05360099.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter radioresistens SK82] gi|262378870|ref|ZP_06072027.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter radioresistens SH164] gi|255304129|gb|EET83320.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter radioresistens SK82] gi|262300155|gb|EEY88067.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter radioresistens SH164] Length = 236 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 123/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D +LT RRSCREGICG Sbjct: 5 TRTFHIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDESLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC++++ D+ I + PLP + VIKDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLENLNDLPNEITIRPLPGLPVIKDLVVDMNQFYEQYNKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQ+ E+R ++GLYEC++CACCST+CPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQTPEERDHLNGLYECILCACCSTACPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL ++DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATQDRLARMDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|172062862|ref|YP_001810513.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria MC40-6] gi|171995379|gb|ACB66297.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia ambifaria MC40-6] Length = 233 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 174/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEVYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKA-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIRPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|68488255|ref|XP_712003.1| hypothetical protein CaO19.8251 [Candida albicans SC5314] gi|68488298|ref|XP_711983.1| hypothetical protein CaO19.637 [Candida albicans SC5314] gi|46433335|gb|EAK92779.1| hypothetical protein CaO19.637 [Candida albicans SC5314] gi|46433359|gb|EAK92802.1| hypothetical protein CaO19.8251 [Candida albicans SC5314] gi|238879971|gb|EEQ43609.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Candida albicans WO-1] Length = 263 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 149/239 (62%), Positives = 179/239 (74%), Gaps = 3/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A LK+++IYRWNPD P M TY VDL+ CGPMVLD LL IKN+ D TLTLRR Sbjct: 23 AAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRR 82 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI G NTLAC + +D + VYPLPHM V++DLV D++HFY Q++ Sbjct: 83 SCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYK 142 Query: 138 SIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEP+L+ +P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+L Sbjct: 143 SIEPYLQRESNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVL 202 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRWLIDSRD+ R L++ LYRCHTIMNC ++CPKGLNP KAIA+IK L Sbjct: 203 MQAYRWLIDSRDQATANRKAMLQNSMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 261 >gi|170726189|ref|YP_001760215.1| succinate dehydrogenase iron-sulfur subunit [Shewanella woodyi ATCC 51908] gi|169811536|gb|ACA86120.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella woodyi ATCC 51908] Length = 235 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 158/232 (68%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 IYR+NPD P M Y +++ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NIAIYRYNPDVDAKPYMKDYTLEVAEGTDMMVLDALMLLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + K I + PLP M V++DL+VD+S FY Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSTFKGKKIEIRPLPGMPVVRDLIVDLSQFYKQYEKIKPYLINDE 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDSR Sbjct: 124 KTPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL L+D + ++RCH+IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 DTATEERLSELDDAYSVFRCHSIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|262369425|ref|ZP_06062753.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter johnsonii SH046] gi|262315493|gb|EEY96532.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter johnsonii SH046] Length = 236 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 128/230 (55%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D +LT RRSCREGICG Sbjct: 5 TRTFNIYRYDPDKDAAPYMQTFKLELTDKHRMLLDALLALKV-QDESLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I V PLP + V+KDLVVDM+ FY Q+ I P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEVITVRPLPGLPVVKDLVVDMNQFYDQYNKIHPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ +DGLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLDGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD Sbjct: 184 RDTATQERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLD 233 >gi|198436811|ref|XP_002127020.1| PREDICTED: similar to Sdhb-prov protein [Ciona intestinalis] Length = 292 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 154/239 (64%), Positives = 188/239 (78%), Gaps = 5/239 (2%) Query: 22 TGEKNLKEYRIYRWNPDNKGN---PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + LK + IYRWNP+ +G+ P M Y VDL++CGPMVLD L+ IKN+ DPTLT RR Sbjct: 39 EQNQRLKTFSIYRWNPEAEGDMKLPVMHKYQVDLNDCGPMVLDALIKIKNEQDPTLTFRR 98 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI GTNTLAC + ++ +YPLPHM V+KDLV DM++FY+Q+R Sbjct: 99 SCREGICGSCAMNIGGTNTLACLARIDTNLSKKTKIYPLPHMYVVKDLVPDMNNFYAQYR 158 Query: 138 SIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEP+LK K KE QS DRQK+DGLYEC++CACCSTSCPSYWW+SD+YLGPA+L Sbjct: 159 SIEPFLKQKDASKLGKENFQSVADRQKLDGLYECILCACCSTSCPSYWWSSDKYLGPAVL 218 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRDE+Q ERLD + DPF LY+CHTIMNCT++CPKGLNP AIA++K ML Sbjct: 219 MQAYRWIIDSRDEYQKERLDRMNDPFSLYKCHTIMNCTKACPKGLNPGLAIAELKKMLA 277 >gi|254369885|ref|ZP_04985894.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica FSC022] gi|157122855|gb|EDO66972.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica FSC022] Length = 233 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+V+M FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVNMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKSV 233 >gi|167566428|ref|ZP_02359344.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia oklahomensis EO147] gi|167573539|ref|ZP_02366413.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia oklahomensis C6786] gi|167840397|ref|ZP_02467081.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia thailandensis MSMB43] Length = 233 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 171/232 (73%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY ++L M+LD L+ +K+ +D TL+ RRSCREG+CGS Sbjct: 4 RIFEIYRYDPDKDAAPRMQTYELEL-QHERMLLDALVKLKS-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI P+L Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIRPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNL+DP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DRATGERLDNLDDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|157961611|ref|YP_001501645.1| succinate dehydrogenase iron-sulfur subunit [Shewanella pealeana ATCC 700345] gi|157846611|gb|ABV87110.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella pealeana ATCC 700345] Length = 235 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 165/233 (70%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++D MVLD LL +K ++DPTL RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMKDYSLEVDEGTDMMVLDALLKLK-ELDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + I + PLP M V++DL+VD++ FY+Q+ I+P+L Sbjct: 63 DGINMNGKNGLACITPVSTFTGKKIEIRPLPGMPVVRDLIVDLTQFYTQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS EDR+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKTPAREHLQSPEDREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSGLDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|307130096|ref|YP_003882112.1| succinate dehydrogenase, FeS subunit [Dickeya dadantii 3937] gi|306527625|gb|ADM97555.1| succinate dehydrogenase, FeS subunit [Dickeya dadantii 3937] Length = 238 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 125/234 (53%), Positives = 163/234 (69%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y ++ + M+L L + + DPTL RRSCREG+CGS Sbjct: 3 VEFSIYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 G+N++G N LAC+ + ++ K I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 63 DGLNMNGKNGLACITPVSTLRNGKSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E R+K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NNGKNPPAREHLQSPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD ERLD+L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 183 IDSRDTETKERLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|118498198|ref|YP_899248.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. novicida U112] gi|194324380|ref|ZP_03058153.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Francisella tularensis subsp. novicida FTE] gi|208780224|ref|ZP_03247566.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Francisella novicida FTG] gi|254373542|ref|ZP_04989029.1| succinate dehydrogenase catalytic subunit [Francisella tularensis subsp. novicida GA99-3549] gi|254375006|ref|ZP_04990486.1| hypothetical protein FTDG_01193 [Francisella novicida GA99-3548] gi|118424104|gb|ABK90494.1| succinate dehydrogenase iron-sulfur protein [Francisella novicida U112] gi|151571267|gb|EDN36921.1| succinate dehydrogenase catalytic subunit [Francisella novicida GA99-3549] gi|151572724|gb|EDN38378.1| hypothetical protein FTDG_01193 [Francisella novicida GA99-3548] gi|194321445|gb|EDX18930.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Francisella tularensis subsp. novicida FTE] gi|208743873|gb|EDZ90175.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Francisella novicida FTG] gi|332184744|gb|AEE26998.1| Succinate dehydrogenase iron-sulfur protein [Francisella cf. novicida 3523] Length = 233 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+VDM FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVDMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKSV 233 >gi|4803711|emb|CAB42659.1| iron sulfur subunit of succinate dehydrogenase [Zea mays] gi|224031477|gb|ACN34814.1| unknown [Zea mays] Length = 282 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 143/232 (61%), Positives = 172/232 (74%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGIC Sbjct: 46 TKTFSIYRWDPDSPSTKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 105 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC MNIDG N LAC+ + A V PLPHM V+KDLVVDM++FYSQ++S+EPWLK Sbjct: 106 GSCAMNIDGDNGLACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKR 165 Query: 146 VSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P + E+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW+ Sbjct: 166 KDQPPQQGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 225 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRD+F ERLD + D F+LYRCHTI NCT +CPKGLNPAK I IK + L Sbjct: 226 QDSRDQFTKERLDAINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 277 >gi|295841393|dbj|BAJ07110.1| succinate dehydrogenase subunit B [Corynespora cassiicola] Length = 307 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 138/240 (57%), Positives = 176/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P + K + IYRWNPD P M TY +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 66 PQPDKDAKTKTFHIYRWNPDEPTSKPKMQTYTLDLNKTGPMMLDALIRIKNELDPTLTFR 125 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPHM ++KDLV DM+ FY Q+ Sbjct: 126 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQY 185 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 RS++P+L+ +P +E QS E+R+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+ Sbjct: 186 RSVKPYLQRDTPAPDGREYRQSKEERKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAV 245 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRW+ DSRDE +R D L + +YRCHTI+NC+++CPKGLNPA AIA+IK + Sbjct: 246 LLQSYRWIADSRDEKTAQRQDALNNSMSMYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 305 >gi|114563515|ref|YP_751028.1| succinate dehydrogenase iron-sulfur subunit [Shewanella frigidimarina NCIMB 400] gi|2239250|emb|CAA74088.1| succinate dehydrogenase putative iron sulphur subunit [Shewanella frigidimarina NCIMB 400] gi|114334808|gb|ABI72190.1| succinate dehydrogenase subunit B [Shewanella frigidimarina NCIMB 400] Length = 235 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 161/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR+NPD P M Y +++ D MVLD L+ +K + D TL RRSCREG+CGS Sbjct: 4 TFALYRYNPDVDTKPYMKDYTLEVPDGTDMMVLDALIKLK-EQDSTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K I + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPLSTFKGKKIEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EQAPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|89257048|ref|YP_514410.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. holarctica LVS] gi|115315403|ref|YP_764126.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. holarctica OSU18] gi|156503257|ref|YP_001429322.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009434|ref|ZP_02274365.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica FSC200] gi|254368289|ref|ZP_04984308.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica 257] gi|290953668|ref|ZP_06558289.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. holarctica URFT1] gi|295312985|ref|ZP_06803694.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. holarctica URFT1] gi|89144879|emb|CAJ80224.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica LVS] gi|115130302|gb|ABI83489.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica OSU18] gi|134254098|gb|EBA53192.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica 257] gi|156253860|gb|ABU62366.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 233 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+V+M FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVNMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATQQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKSV 233 >gi|294787721|ref|ZP_06752965.1| succinate dehydrogenase iron-sulfur subunit [Simonsiella muelleri ATCC 29453] gi|294484014|gb|EFG31697.1| succinate dehydrogenase iron-sulfur subunit [Simonsiella muelleri ATCC 29453] Length = 234 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 170/234 (72%), Gaps = 1/234 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++YR+NPD P M Y +++ +LD ++ +K D TL+ RRSCREGIC Sbjct: 2 EKIRFQVYRYNPDRDAAPYMQDYELEIQPTDVKLLDAIVKLKA-QDDTLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDGMNINGKNGLACLTDIRSLQQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P P +E LQS E+R ++DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR++ D Sbjct: 121 DTPAPQRERLQSQEERAELDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLNAYRFIAD 180 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERLD+L DP+RL+RCHTIMNC CPK LNP +AI KIK ++L+R I Sbjct: 181 SRDTITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLERAI 234 >gi|89573839|gb|ABD77145.1| succinate dehydrogenase complex subunit B [Equus caballus] Length = 245 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 144/231 (62%), Positives = 178/231 (77%), Gaps = 4/231 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 15 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 74 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 75 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 134 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 135 KSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 194 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP K Sbjct: 195 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPGK 245 >gi|56707254|ref|YP_169150.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110669724|ref|YP_666281.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis FSC198] gi|134301289|ref|YP_001121257.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|224456310|ref|ZP_03664783.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254369938|ref|ZP_04985946.1| succinate dehydrogenase catalytic subunit [Francisella tularensis subsp. tularensis FSC033] gi|254874090|ref|ZP_05246800.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|54113645|gb|AAV29456.1| NT02FT1783 [synthetic construct] gi|56603746|emb|CAG44708.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320057|emb|CAL08091.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. tularensis FSC198] gi|134049066|gb|ABO46137.1| succinate dehydrogenase iron-sulfur domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568184|gb|EDN33838.1| succinate dehydrogenase catalytic subunit [Francisella tularensis subsp. tularensis FSC033] gi|254840089|gb|EET18525.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282158363|gb|ADA77754.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis NE061598] Length = 233 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+VDM FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVDMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKNV 233 >gi|169600994|ref|XP_001793919.1| hypothetical protein SNOG_03351 [Phaeosphaeria nodorum SN15] gi|111067436|gb|EAT88556.1| hypothetical protein SNOG_03351 [Phaeosphaeria nodorum SN15] Length = 306 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 139/233 (59%), Positives = 175/233 (75%), Gaps = 3/233 (1%) Query: 26 NLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT RRSCREGI Sbjct: 72 KVKTFHIYRWNPDEPTSKPKMQSYELDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGI 131 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNIDG NTLAC + D +YPLPHM V+KDLV DM+ FY Q+RS++P+L Sbjct: 132 CGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYL 191 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +P +E Q+ EDR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+LLQ+YRW Sbjct: 192 QRTTPAPDGREYRQTKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRW 251 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRDE ER D L + LYRCHTI+NC+++CPKGLNPA AIA+IK + Sbjct: 252 IADSRDEKLAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304 >gi|146415877|ref|XP_001483908.1| hypothetical protein PGUG_03289 [Meyerozyma guilliermondii ATCC 6260] Length = 257 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 146/235 (62%), Positives = 176/235 (74%), Gaps = 3/235 (1%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + LK+++IYRWNPD P M TY VDL+ CGPMVLD +L IKN+ D TLT RRSCRE Sbjct: 21 QPALKKFQIYRWNPDTPEVEPQMKTYEVDLNQCGPMVLDAILKIKNEQDSTLTFRRSCRE 80 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI G NTLAC K KD +YPLPHM V++DLV D++HFY Q++SI+P Sbjct: 81 GICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIQP 140 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +L+ + P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+QAY Sbjct: 141 YLQRETLPSDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLMQAY 200 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RWLIDSRDE R L++ LYRCHTIMNC ++CPKGLNP +AIA+IK L Sbjct: 201 RWLIDSRDEATKARKQMLQNSMSLYRCHTIMNCARTCPKGLNPGRAIAEIKKQLA 255 >gi|220934653|ref|YP_002513552.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995963|gb|ACL72565.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thioalkalivibrio sp. HL-EbGR7] Length = 233 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 123/232 (53%), Positives = 163/232 (70%), Gaps = 3/232 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDN--CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + IYR+NP+ P M + + G M+L+ LL +K D TL+ RRSC EG+CGS Sbjct: 3 FSIYRFNPETDAEPYMQDFELPDAQVEPGMMLLEALLRLKR-QDETLSFRRSCGEGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+GTN LACV + +K I + P P M VI+DL+VDM +FY+Q+R +P+L Sbjct: 62 DGMNINGTNGLACVTPLASLKQPITLRPFPGMPVIRDLIVDMGNFYNQYRKAKPYLVIND 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P E QS +DR+K+DGLYEC++C CCS SCPSYWWN D++LGPA LLQ+ R+++DSR Sbjct: 122 PVPEVERKQSPQDREKLDGLYECILCGCCSASCPSYWWNPDKFLGPAALLQSARFILDSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ ERL+ L+D ++LYRCHTIMNC Q CPKGLNP KAI +IK +L R + Sbjct: 182 DQATPERLEQLDDAYKLYRCHTIMNCVQVCPKGLNPTKAIGEIKKQMLKRSL 233 >gi|167527035|ref|XP_001747850.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773599|gb|EDQ87237.1| predicted protein [Monosiga brevicollis MX1] Length = 312 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 143/238 (60%), Positives = 182/238 (76%), Gaps = 3/238 (1%) Query: 21 PTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 +K + IYRW+P+ P M Y +D+++CGPMVLD L+ IKN+ DPTLT RRS Sbjct: 73 EAAAPKMKSFSIYRWDPERPGDKPRMQEYSIDMNSCGPMVLDALIKIKNEQDPTLTFRRS 132 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNIDGTNTLAC + + A+ + PLPHM V+KDLV DM++FY Q+++ Sbjct: 133 CREGICGSCSMNIDGTNTLACLCRVTTESSSAMKINPLPHMYVVKDLVPDMANFYQQYQA 192 Query: 139 IEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 IEPWL+T P+ +E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D+YLGPA L+ Sbjct: 193 IEPWLQTDKAPEDGREYLQSVEDRKKLDGMYECILCACCSTSCPSYWWNMDQYLGPAALM 252 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QA RW+ DSRD+ ER++ L DPF +YRCHTIMNCT++CPK LNP KAIA+IK +L Sbjct: 253 QARRWMADSRDDRAKERMEKLRDPFSMYRCHTIMNCTKTCPKHLNPGKAIAEIKRDML 310 >gi|159476382|ref|XP_001696290.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase [Chlamydomonas reinhardtii] gi|158282515|gb|EDP08267.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase [Chlamydomonas reinhardtii] Length = 291 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 142/230 (61%), Positives = 178/230 (77%), Gaps = 1/230 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 KE++IYRWNPD+ P +Y VD++NCGPM+LD LL IK++ D TL+LRRSCREGICGS Sbjct: 58 KEFQIYRWNPDSDEKPKYASYQVDINNCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGS 117 Query: 88 CGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C MNIDG+NTLAC+ + G + V PLPHM V+KDLVVDM++FY+Q++SI+P+L+ Sbjct: 118 CAMNIDGSNTLACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQKK 177 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +E QS E R K+DGLYEC++CACCSTSCPSYWWNSD+YLGPA+LL AYRW+IDS Sbjct: 178 EAAKGQEFYQSKESRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLAAYRWIIDS 237 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD+ ER+ ++D ++LYRC TIMNC CPKGLNP KAI KIK L Sbjct: 238 RDDMTSERMKEVDDAYKLYRCKTIMNCATVCPKGLNPGKAINKIKQSLAK 287 >gi|190346991|gb|EDK39191.2| hypothetical protein PGUG_03289 [Meyerozyma guilliermondii ATCC 6260] Length = 257 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 146/235 (62%), Positives = 176/235 (74%), Gaps = 3/235 (1%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + LK+++IYRWNPD P M TY VDL+ CGPMVLD +L IKN+ D TLT RRSCRE Sbjct: 21 QPALKKFQIYRWNPDTPEVEPQMKTYEVDLNQCGPMVLDAILKIKNEQDSTLTFRRSCRE 80 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI G NTLAC K KD +YPLPHM V++DLV D++HFY Q++SI+P Sbjct: 81 GICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIQP 140 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +L+ + P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+QAY Sbjct: 141 YLQRETLPSDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLMQAY 200 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RWLIDSRDE R L++ LYRCHTIMNC ++CPKGLNP +AIA+IK L Sbjct: 201 RWLIDSRDEATKARKQMLQNSMSLYRCHTIMNCARTCPKGLNPGRAIAEIKKQLA 255 >gi|209954765|dbj|BAG80573.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae] Length = 278 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 176/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 37 PNPSETPRTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALIRIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ FY Q+ Sbjct: 97 RSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQY 156 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 157 KSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 216 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRC TI+NC+++CPKGLNPA+AIA+IK ++ Sbjct: 217 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCLTILNCSRTCPKGLNPARAIAEIKKLMA 276 >gi|126139906|ref|XP_001386475.1| succinate dehydrogenase subunit [Scheffersomyces stipitis CBS 6054] gi|126093759|gb|ABN68446.1| succinate dehydrogenase subunit [Scheffersomyces stipitis CBS 6054] Length = 262 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 142/240 (59%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + +K ++IYRWNPD P M Y +DL++CGPMVLD +L IKN+ D TLT R Sbjct: 21 TSAEKTSRIKSFQIYRWNPDTPEVAPTMQKYDIDLNDCGPMVLDAILKIKNEQDSTLTFR 80 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC + D + +YPLPHM V++DLV D++HFY Q+ Sbjct: 81 RSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQY 140 Query: 137 RSIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ +P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+ Sbjct: 141 KSIQPYLQRDTPPTDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAV 200 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+QAYRWLIDSRDE R + L++ LYRCHTIMNC+++CPKGLNP KAIA+IK L Sbjct: 201 LMQAYRWLIDSRDEASKIRREMLQNSMSLYRCHTIMNCSRTCPKGLNPGKAIAEIKKQLA 260 >gi|89573835|gb|ABD77143.1| succinate dehydrogenase complex subunit B [Canis lupus familiaris] Length = 250 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 144/230 (62%), Positives = 178/230 (77%), Gaps = 4/230 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 21 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 80 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 81 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 140 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 141 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 200 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP Sbjct: 201 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPG 250 >gi|258572530|ref|XP_002545027.1| succinate dehydrogenase iron-sulfur protein [Uncinocarpus reesii 1704] gi|237905297|gb|EEP79698.1| succinate dehydrogenase iron-sulfur protein [Uncinocarpus reesii 1704] Length = 289 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 141/232 (60%), Positives = 176/232 (75%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K ++IYRW+PD P M +Y VDL+ GPMVLD L+ IKN+ DPTLT RRSCREGIC Sbjct: 56 IKTFQIYRWDPDQPSEKPRMQSYTVDLNKTGPMVLDALIRIKNEEDPTLTFRRSCREGIC 115 Query: 86 GSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNIDG NTLAC + D +YPLPH V+KDLV D++H Y Q++SI+P+L+ Sbjct: 116 GSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDLTHLYKQYKSIKPYLQ 175 Query: 145 TVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + P+ KE+ QS DR+K+DGLYEC++C CCSTSCPSYWWNS+ YLGPA+LLQ+YRWL Sbjct: 176 RETKPEDGKEIRQSPADRKKLDGLYECILCFCCSTSCPSYWWNSEEYLGPAVLLQSYRWL 235 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +DSRDE ER L++ +YRCHTIMNCT++CPKGLNP KAIA+IK L Sbjct: 236 VDSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKQLA 287 >gi|262281277|ref|ZP_06059059.1| succinate dehydrogenase/fumarate reductase [Acinetobacter calcoaceticus RUH2202] gi|299768986|ref|YP_003731012.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter sp. DR1] gi|262257508|gb|EEY76244.1| succinate dehydrogenase/fumarate reductase [Acinetobacter calcoaceticus RUH2202] gi|298699074|gb|ADI89639.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter sp. DR1] Length = 236 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 167/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC++++ D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLENLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ ++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTATADRLSRLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|302878560|ref|YP_003847124.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gallionella capsiferriformans ES-2] gi|302581349|gb|ADL55360.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gallionella capsiferriformans ES-2] Length = 231 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 171/231 (74%), Gaps = 1/231 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++RIYR+NP+ P M TY +++++ G M+LD L+ +K + D +L+LR+SCREG+CGS Sbjct: 2 KFRIYRYNPETDAAPRMQTYDLNIESGGKMLLDALVLLK-EQDDSLSLRKSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LAC+ + +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P+L P Sbjct: 61 AMNINGRNGLACITPLSSLKEPVELRPLPGLPVIRDLIVDMTQFFKQYHSIKPYLINNDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS R+ ++GLYEC++C CC+T+CPS+WWN D+++GPA LLQAYR++ D+RD Sbjct: 121 PPETERLQSPAQREHLNGLYECILCGCCTTACPSFWWNPDKFVGPAGLLQAYRFIADTRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ERLD+LEDP+RL+RCHTIMNC CPK LNP +AI IK +++ R + Sbjct: 181 QATSERLDDLEDPYRLFRCHTIMNCVDVCPKELNPTEAIGHIKDLMIKRMV 231 >gi|158452925|gb|ABW39788.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] Length = 306 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 142/251 (56%), Positives = 181/251 (72%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S ++ P+ + K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 58 KTSTIQE----PEPSKDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRI 113 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDL Sbjct: 114 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDL 173 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q+RS++P+L+ + +E QS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 174 VPDMTLFYKQYRSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYW 233 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WN + YLGPA+LLQ+YRW+ DSRDE + ER D L + LYRCHTI+NC+++CPKGLNPA Sbjct: 234 WNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPA 293 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 294 LAIAEIKKSMA 304 >gi|134293108|ref|YP_001116844.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia vietnamiensis G4] gi|134136265|gb|ABO57379.1| succinate dehydrogenase subunit B [Burkholderia vietnamiensis G4] Length = 233 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 175/232 (75%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + +YR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFELYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKA-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+HF++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTHFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|187931031|ref|YP_001891015.1| succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187711940|gb|ACD30237.1| succinate dehydrogenase iron-sulfur protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 233 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 167/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+VDM FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVDMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D + +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTAKEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKSV 233 >gi|148652076|ref|YP_001279169.1| succinate dehydrogenase iron-sulfur subunit [Psychrobacter sp. PRwf-1] gi|148571160|gb|ABQ93219.1| succinate dehydrogenase subunit B [Psychrobacter sp. PRwf-1] Length = 236 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 162/232 (69%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M TY ++L + M+LD LL +K K D ++T RRSCREGICG Sbjct: 5 TRTIEIYRYDPDKDAAPYMQTYTIELLDSDRMLLDVLLRLK-KQDESITFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ +M + I + PLP + V++DLVVDM+ FY Q+ + P+L Sbjct: 64 SDGVNINGKNGLACLINMNTLPEKITIRPLPGLPVVRDLVVDMNQFYEQYEKVHPYLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P E LQS EDR+K++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++ DS Sbjct: 124 QPAPPTERLQSPEDREKLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFVADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD RL ++DPF L+RC IMNC CPKGLNP +AI ++ +LL++ Sbjct: 184 RDSDTQARLARMDDPFSLFRCRGIMNCVAVCPKGLNPTRAIGHLRNLLLEQA 235 >gi|148681386|gb|EDL13333.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_c [Mus musculus] Length = 386 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 139/219 (63%), Positives = 173/219 (78%), Gaps = 4/219 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPK Sbjct: 219 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPK 257 >gi|302828426|ref|XP_002945780.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase [Volvox carteri f. nagariensis] gi|300268595|gb|EFJ52775.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase [Volvox carteri f. nagariensis] Length = 291 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 146/238 (61%), Positives = 183/238 (76%), Gaps = 2/238 (0%) Query: 19 NAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 AP + L KE++IYRWNP+ P +Y VD++NCGPM+LD LL IK++ D TL+LR Sbjct: 48 KAPLSKPPLYKEFQIYRWNPNGDEKPKYVSYQVDINNCGPMMLDVLLKIKDEQDQTLSLR 107 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDGTNTLAC+ + G + V PLPHM V+KDLVVDMS+FY+Q+ Sbjct: 108 RSCREGICGSCAMNIDGTNTLACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMSNFYAQY 167 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +SI+P+L+ KE QS E R K+DG+YEC++CACCSTSCPSYWWNSD+YLGPA+L Sbjct: 168 KSIKPYLQKKEASSGKEWYQSKESRAKLDGMYECILCACCSTSCPSYWWNSDKYLGPAVL 227 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L AYRW+IDSRD++ ER+ L+D ++LYRC TIMNC CPKGLNP KAIAK+K + Sbjct: 228 LAAYRWIIDSRDDYTAERMAQLDDAYKLYRCKTIMNCATVCPKGLNPGKAIAKLKQTM 285 >gi|288575540|ref|ZP_06393786.1| succinate dehydrogenase iron-sulfur subunit [Neisseria mucosa ATCC 25996] gi|298369267|ref|ZP_06980585.1| succinate dehydrogenase iron-sulfur subunit [Neisseria sp. oral taxon 014 str. F0314] gi|288567505|gb|EFC89065.1| succinate dehydrogenase iron-sulfur subunit [Neisseria mucosa ATCC 25996] gi|298283270|gb|EFI24757.1| succinate dehydrogenase iron-sulfur subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 242 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 122/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 72 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 242 >gi|91793538|ref|YP_563189.1| succinate dehydrogenase iron-sulfur subunit [Shewanella denitrificans OS217] gi|91715540|gb|ABE55466.1| succinate dehydrogenase subunit B [Shewanella denitrificans OS217] Length = 235 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 161/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR+NPD P M Y +++ D MVLD L+ +K + D TL RRSCREG+CGS Sbjct: 4 TFAVYRYNPDVDTKPYMKDYILEVPDGSDMMVLDALIKLK-EQDSTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + I + PLP M V++DLVVD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPLSTLKGKKIEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKAPAREHLQSPEEREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|325128090|gb|EGC50985.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis N1568] gi|325130098|gb|EGC52882.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis OX99.30304] gi|325134132|gb|EGC56784.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M13399] gi|325138098|gb|EGC60671.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis ES14902] gi|325142228|gb|EGC64646.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis 961-5945] gi|325198184|gb|ADY93640.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis G2136] gi|325200364|gb|ADY95819.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis H44/76] gi|325204023|gb|ADY99476.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M01-240355] Length = 232 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 3 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 62 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 121 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 122 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 182 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 232 >gi|209954767|dbj|BAG80574.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae] Length = 278 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 177/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 37 PNPSETPRTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALIRIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ FY Q+ Sbjct: 97 RSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQY 156 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 157 KSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 216 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRC+TI+NC+++CPKGLNPA+AIA+IK ++ Sbjct: 217 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCNTILNCSRTCPKGLNPARAIAEIKKLMA 276 >gi|255065298|ref|ZP_05317153.1| succinate dehydrogenase iron-sulfur subunit [Neisseria sicca ATCC 29256] gi|284799549|ref|ZP_05984273.2| succinate dehydrogenase iron-sulfur subunit [Neisseria subflava NJ9703] gi|255050719|gb|EET46183.1| succinate dehydrogenase iron-sulfur subunit [Neisseria sicca ATCC 29256] gi|284797364|gb|EFC52711.1| succinate dehydrogenase iron-sulfur subunit [Neisseria subflava NJ9703] Length = 242 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 122/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 72 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 242 >gi|168064341|ref|XP_001784121.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664321|gb|EDQ51045.1| predicted protein [Physcomitrella patens subsp. patens] Length = 229 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 144/229 (62%), Positives = 179/229 (78%), Gaps = 2/229 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N+K++ IYRW+PD+ P + TY ++ + CGPMVLD L+ IKN+ID LT RRSCREGIC Sbjct: 1 NIKKFSIYRWSPDSSEKPYLKTYSINTNECGPMVLDALIKIKNEIDTGLTFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAV-YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNI G+N LAC+ ++ + + PLPHM VIKDLVVDM+ FYSQ++SIEPWLK Sbjct: 61 GSCAMNIGGSNGLACLTPIEPDPKSETIISPLPHMYVIKDLVVDMTQFYSQYKSIEPWLK 120 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T P KE LQ+ +DR K+DG+YEC++CACC+TSCPSYWWN D+YLGPA LLQA+RW+ Sbjct: 121 TKKPAPGGKEYLQTKKDRLKLDGMYECILCACCTTSCPSYWWNPDKYLGPAALLQAHRWI 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 DSRDEF ERL+ L+DPF+LYRCHTIMNC ++CPKGLNP IA IK Sbjct: 181 ADSRDEFTKERLEALDDPFKLYRCHTIMNCAKACPKGLNPGLQIAAIKK 229 >gi|262375854|ref|ZP_06069086.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter lwoffii SH145] gi|262309457|gb|EEY90588.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter lwoffii SH145] Length = 236 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 129/230 (56%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFHIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I V PLP + V+KDLVVDM+ FY Q+ I P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPNEITVRPLPGLPVVKDLVVDMNQFYDQYNKIHPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ +DGLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLDGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD ERL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD Sbjct: 184 RDTGTQERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLD 233 >gi|74317203|ref|YP_314943.1| succinate dehydrogenase subunit B [Thiobacillus denitrificans ATCC 25259] gi|74056698|gb|AAZ97138.1| succinate dehydrogenase [Thiobacillus denitrificans ATCC 25259] Length = 231 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 130/231 (56%), Positives = 171/231 (74%), Gaps = 1/231 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R+YR++P++ P M +D+D G M+LD LL IK D TL+LRRSCREG+CGS Sbjct: 2 KFRVYRYSPESGKKPFMQDVELDIDPAGKMLLDALLAIKA-QDETLSLRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MN++G N LAC+ + ++K I V PLP + VI+DLVVDM FY Q+RSI+PWL P Sbjct: 61 AMNVNGRNRLACITPLSELKEPIEVRPLPGLPVIRDLVVDMEPFYRQYRSIKPWLINDDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 +P E +QS EDR +DG YEC++CACC++SCPSYWWN ++++GPA LLQAYR++ DSRD Sbjct: 121 EPEVERMQSPEDRGLLDGAYECILCACCTSSCPSYWWNPEKFVGPAGLLQAYRFIADSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E RLDNLEDP+RLYRC IMNC CPKGLNPA AIA+I+ +L R++ Sbjct: 181 EATAARLDNLEDPYRLYRCRGIMNCVDVCPKGLNPAGAIARIRTLLAKRRV 231 >gi|296810608|ref|XP_002845642.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma otae CBS 113480] gi|238843030|gb|EEQ32692.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma otae CBS 113480] Length = 284 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 141/232 (60%), Positives = 176/232 (75%), Gaps = 3/232 (1%) Query: 26 NLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K ++IYRWNPD P M TY +DL+ GPMVLD L+ IKN+ DPTLT RRSCREGI Sbjct: 50 KMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNENDPTLTFRRSCREGI 109 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNIDG NTLAC + D +YPLPH V+KDLV DM+ FY Q++SI+P+L Sbjct: 110 CGSCAMNIDGVNTLACLCRTPTDTSKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIQPYL 169 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +P +E QS DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+LLQ+YRW Sbjct: 170 QRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRW 229 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LIDSRDE +R L++ +YRCHTI+NC+++CPKGLNP KAIA+IK M+ Sbjct: 230 LIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMM 281 >gi|30250296|ref|NP_842366.1| succinate dehydrogenase iron-sulfur subunit [Nitrosomonas europaea ATCC 19718] gi|30181091|emb|CAD86283.1| sdhB; succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Nitrosomonas europaea ATCC 19718] Length = 231 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 124/230 (53%), Positives = 171/230 (74%), Gaps = 1/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R++PD P M Y V+L+ M+LD L+ IK ID +L+LRRSCREG+CGS Sbjct: 3 FSISRYDPDKDEKPYMQDYDVELEPTDKMLLDALIRIK-TIDDSLSLRRSCREGVCGSDA 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + ++ + + PLP + +I+DL+VDMS F+ Q+ SI+P+L P Sbjct: 62 MNINGRNGLACITPLAGLREPVEIRPLPGLPIIRDLIVDMSQFFKQYHSIKPYLVNNDPP 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P E LQS E+R ++DGLYEC++CACC+TSCPS+WWN D+++GPA LLQAYR+L DSRD+ Sbjct: 122 PETERLQSPEERARLDGLYECILCACCTTSCPSFWWNPDKFVGPAGLLQAYRFLADSRDQ 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD+LEDP+RL+RCH+IMNC +CPKGLNP AI IK+M+L++ + Sbjct: 182 ATSERLDDLEDPYRLFRCHSIMNCVDACPKGLNPTAAIESIKIMMLNKTV 231 >gi|237653212|ref|YP_002889526.1| succinate dehydrogenase iron-sulfur subunit [Thauera sp. MZ1T] gi|237624459|gb|ACR01149.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thauera sp. MZ1T] Length = 236 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 123/236 (52%), Positives = 171/236 (72%), Gaps = 1/236 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K ++IYR++PD P M V+L+ +LD L+ ++ K D +++ RRSCREG Sbjct: 2 SKRTVHFKIYRYDPDKDEKPYMQDISVELEPSDKKLLDALVRLRAK-DDSMSFRRSCREG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CGS MNI+G N LAC+ D+ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 VCGSDAMNINGKNGLACLTDVDSLQQPITLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P P +E LQS EDR++++GLYEC++CACCSTSC S+WWN D+++GPA LL AYR+L Sbjct: 121 VNNDPPPERERLQSPEDREELNGLYECILCACCSTSCQSFWWNPDKFVGPAGLLAAYRFL 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RD+ G RLDNLEDP+RL+RCH+IMNC CPKGLNP +AI KIK M++ R I Sbjct: 181 ADTRDQDTGARLDNLEDPYRLFRCHSIMNCVDVCPKGLNPTRAIGKIKDMMVRRAI 236 >gi|149238940|ref|XP_001525346.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146450839|gb|EDK45095.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 261 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 146/239 (61%), Positives = 178/239 (74%), Gaps = 3/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A +K+++IYRWNPD P M TY +DL+ CGPMVLD LL IKN+ D TLTLRR Sbjct: 21 AEEKAPRVKKFQIYRWNPDTPEVQPKMQTYEIDLNKCGPMVLDALLKIKNEQDATLTLRR 80 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI G NTLAC + +D VYPLPHM V++DLV D++HFY Q++ Sbjct: 81 SCREGICGSCAMNIGGRNTLACLCRIDQDTTKETKVYPLPHMFVVRDLVPDLTHFYKQYK 140 Query: 138 SIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SI+P+L+ + +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+L Sbjct: 141 SIQPYLQRDTHPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVL 200 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRWLIDSRD+ ER L++ LYRCHTIMNC ++CPKGLNP KAIA+IK L Sbjct: 201 MQAYRWLIDSRDQATAERKAMLQNSMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 259 >gi|329897266|ref|ZP_08272004.1| Succinate dehydrogenase iron-sulfur protein [gamma proteobacterium IMCC3088] gi|328921262|gb|EGG28658.1| Succinate dehydrogenase iron-sulfur protein [gamma proteobacterium IMCC3088] Length = 235 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 127/235 (54%), Positives = 164/235 (69%), Gaps = 2/235 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + E IYR+NP+ P M + VD MVLD L IK + D ++T RRSCREG+CG Sbjct: 1 MLEVSIYRYNPETDSAPFMQDFQVDTGGKDLMVLDVLELIKAQHDTSVTYRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S G+NI+G N LAC+ K + + PLP + VI+DL+VDMS FY+Q+ ++P+L Sbjct: 61 SDGLNINGKNGLACITPLSETVKKNKLVLRPLPGLPVIRDLIVDMSMFYAQYEKVQPYLM 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQ+YR+L Sbjct: 121 NNTPAPAIERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQSYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL NL+DPF ++RCH I NC CPKGLNP +AI I+ MLL R+I Sbjct: 181 DSRDTATEERLANLDDPFSVFRCHGIQNCVNVCPKGLNPTRAIGHIRNMLLSREI 235 >gi|259147950|emb|CAY81199.1| Sdh2p [Saccharomyces cerevisiae EC1118] Length = 266 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 141/234 (60%), Positives = 179/234 (76%), Gaps = 3/234 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK +++YRWNPD P + +Y VDL++CGPMVLD LL IK++ D TLT RRSCREG Sbjct: 31 PRLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREG 90 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC K ++ + +YPLPHM ++KDLV D+++FY Q++SI+P+ Sbjct: 91 ICGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPY 150 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L+ S P+ E+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAYR Sbjct: 151 LQRSSFPEDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYR 210 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 WLIDSRD+ R L + LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 211 WLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264 >gi|53716140|ref|YP_106305.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei ATCC 23344] gi|53722738|ref|YP_111723.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei K96243] gi|67642752|ref|ZP_00441504.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|76817240|ref|YP_335949.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 1710b] gi|121597902|ref|YP_991218.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei SAVP1] gi|124381875|ref|YP_001025629.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei NCTC 10229] gi|126443119|ref|YP_001063463.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 668] gi|126446741|ref|YP_001077703.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei NCTC 10247] gi|126455690|ref|YP_001076364.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 1106a] gi|134278807|ref|ZP_01765521.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 305] gi|167000014|ref|ZP_02265841.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei PRL-20] gi|167724521|ref|ZP_02407757.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei DM98] gi|167743479|ref|ZP_02416253.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 14] gi|167820665|ref|ZP_02452345.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 91] gi|167829025|ref|ZP_02460496.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 9] gi|167850501|ref|ZP_02476009.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei B7210] gi|167899096|ref|ZP_02486497.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 7894] gi|167907441|ref|ZP_02494646.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei NCTC 13177] gi|167915779|ref|ZP_02502870.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 112] gi|167923618|ref|ZP_02510709.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei BCC215] gi|217422321|ref|ZP_03453824.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 576] gi|226195860|ref|ZP_03791447.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei Pakistan 9] gi|237507364|ref|ZP_04520079.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|242311224|ref|ZP_04810241.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1106b] gi|254176192|ref|ZP_04882850.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 10399] gi|254184978|ref|ZP_04891567.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1655] gi|254186205|ref|ZP_04892723.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei Pasteur 52237] gi|254193668|ref|ZP_04900100.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei S13] gi|254203286|ref|ZP_04909647.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei FMH] gi|254205165|ref|ZP_04911518.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei JHU] gi|254264359|ref|ZP_04955224.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1710a] gi|254301259|ref|ZP_04968703.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 406e] gi|254359291|ref|ZP_04975563.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei 2002721280] gi|52213152|emb|CAH39191.1| succinate dehydrogenase iron-sulfur protein [Burkholderia pseudomallei K96243] gi|52422110|gb|AAU45680.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 23344] gi|76581713|gb|ABA51187.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1710b] gi|121225700|gb|ABM49231.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei SAVP1] gi|126222610|gb|ABN86115.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 668] gi|126229458|gb|ABN92871.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1106a] gi|126239595|gb|ABO02707.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei NCTC 10247] gi|134250591|gb|EBA50671.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 305] gi|147745525|gb|EDK52604.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei FMH] gi|147754751|gb|EDK61815.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei JHU] gi|148028478|gb|EDK86438.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei 2002721280] gi|157810728|gb|EDO87898.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 406e] gi|157933891|gb|EDO89561.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei Pasteur 52237] gi|160697234|gb|EDP87204.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 10399] gi|169650419|gb|EDS83112.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei S13] gi|184215570|gb|EDU12551.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1655] gi|217394552|gb|EEC34571.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 576] gi|225932345|gb|EEH28345.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei Pakistan 9] gi|234999569|gb|EEP48993.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|238523943|gb|EEP87378.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|242134463|gb|EES20866.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1106b] gi|243063967|gb|EES46153.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei PRL-20] gi|254215361|gb|EET04746.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1710a] gi|261826540|gb|ABM98704.2| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei NCTC 10229] Length = 233 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 171/232 (73%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++ M+LD L+ +K+ +D TL+ RRSCREG+CGS Sbjct: 4 RIFEIYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKS-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI P+L Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIRPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNL+DP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DRATGERLDNLDDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 233 >gi|156395206|ref|XP_001637002.1| predicted protein [Nematostella vectensis] gi|156224111|gb|EDO44939.1| predicted protein [Nematostella vectensis] Length = 284 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 144/243 (59%), Positives = 188/243 (77%), Gaps = 4/243 (1%) Query: 20 APTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A + E K + +YRW+PD P M + VDL++CGPMVLD L+ IKN++DPTLT RR Sbjct: 34 ATSQEPRYKTFSVYRWDPDKAGDKPRMQEFKVDLNDCGPMVLDALIKIKNEVDPTLTFRR 93 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MNI G NTLAC+ ++D+ +YPLPHM V+KDLV DM+HFY Q+RS Sbjct: 94 SCREGICGSCAMNIGGKNTLACICRIEDLNKPTKIYPLPHMYVVKDLVPDMAHFYEQYRS 153 Query: 139 IEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEP+LK ++ LQS +DR+K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L Sbjct: 154 IEPYLKKKEQVEYGKEQYLQSIDDRKKLDGLYECILCACCSTSCPSYWWNADKYLGPAVL 213 Query: 197 LQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRW+IDSRD+F ER+ ++ D ++++RCHTIMNCT +CPKGLNP AIA+IK M+ Sbjct: 214 MQAYRWMIDSRDDFTAERVAFMDTDEYKVFRCHTIMNCTLTCPKGLNPGLAIAEIKKMVA 273 Query: 256 DRK 258 ++ Sbjct: 274 MQR 276 >gi|89573821|gb|ABD77136.1| succinate dehydrogenase complex subunit B [Cavia porcellus] Length = 255 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 146/233 (62%), Positives = 181/233 (77%), Gaps = 4/233 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT R Sbjct: 22 TAADRAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEMDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+++FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLNNFYAQY 141 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 142 KSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNADKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCTQ+CPKGLNP KA+ Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAL 254 >gi|332992987|gb|AEF03042.1| succinate dehydrogenase catalytic subunit [Alteromonas sp. SN2] Length = 236 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 163/233 (69%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR+NPD P M Y ++++ M++ L + DPTL+ RRSCREG+CGS Sbjct: 4 QFSIYRYNPDVDNKPRMQDYTLEVEEGRDMMVLDALIALKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ K + V PLP + V++DLVVDM+ FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPLSALGKSKVVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDS Sbjct: 124 KQPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL++L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 RDTATDERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLQRAV 236 >gi|323332591|gb|EGA73998.1| Sdh2p [Saccharomyces cerevisiae AWRI796] gi|323336528|gb|EGA77794.1| Sdh2p [Saccharomyces cerevisiae Vin13] gi|323353865|gb|EGA85718.1| Sdh2p [Saccharomyces cerevisiae VL3] Length = 266 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 143/234 (61%), Positives = 179/234 (76%), Gaps = 3/234 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK +++YRWNPD P + +Y VDL++CGPMVLD LL IK++ D TLT RRSCREG Sbjct: 31 PRLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREG 90 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC K ++ + +YPLPHM ++KDLV D+++FY Q++SI+P+ Sbjct: 91 ICGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPY 150 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L+ S PK E+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+LLQAYR Sbjct: 151 LQRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLLQAYR 210 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 WLIDSRD+ R L + LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 211 WLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264 >gi|77360589|ref|YP_340164.1| succinate dehydrogenase iron-sulfur subunit [Pseudoalteromonas haloplanktis TAC125] gi|76875500|emb|CAI86721.1| succinate dehydrogenase, Fe-S protein [Pseudoalteromonas haloplanktis TAC125] Length = 238 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 5/236 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ +YR+NPD P M Y + + M++ L + + DPTL+ RRSCREG+CGS Sbjct: 4 VQFSVYRYNPDVDNAPRMQEYTLQTEEGHDMMVLDALILLKEQDPTLSFRRSCREGVCGS 63 Query: 88 CGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 G+N++G N LAC+ K KG I V PLP + V++DLV+DMS FY+Q+ ++P+L Sbjct: 64 DGVNMNGKNGLACITPLSTLQKGGKGKIVVRPLPGLPVVRDLVIDMSQFYTQYEKVKPYL 123 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P + LQ+ E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 124 INDTPAAGER-LQTIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+D F ++RCH+IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 183 ADSRDTATEERLADLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGQIKSMLLNRAV 238 >gi|89900587|ref|YP_523058.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodoferax ferrireducens T118] gi|89345324|gb|ABD69527.1| succinate dehydrogenase subunit B [Rhodoferax ferrireducens T118] Length = 234 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 167/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +IYR+NPD P M T V+LD M+LD L +K DPT++ RRSCREGICGS Sbjct: 4 RTIQIYRYNPDTDAKPYMQTIEVELDGSERMLLDVLTKLKAT-DPTISYRRSCREGICGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M + I + PLP + V++DL+VDM+ F+ Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLVNMLTLPDKIVLKPLPGLPVVRDLIVDMTLFFKQYHSIKPYLINET 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS E+R +++GLYEC++CA C+TSCP +WWN D+++GPA LLQAYR+L DSR Sbjct: 123 RPPEKERLQSPEERDELNGLYECILCASCTTSCPVFWWNPDKFVGPAGLLQAYRFLSDSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE ERLDNLEDP+RL+RC +IMNC CPK LNP +AI KIK M++ R + Sbjct: 183 DEATSERLDNLEDPYRLFRCTSIMNCVDVCPKSLNPTRAIGKIKEMMVRRAL 234 >gi|6322987|ref|NP_013059.1| Sdh2p [Saccharomyces cerevisiae S288c] gi|118619|sp|P21801|DHSB_YEAST RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|172549|gb|AAA35021.1| succinate dehydrogenase iron-protein subunit (SDH) (EC 1.3.99.1) [Saccharomyces cerevisiae] gi|1360235|emb|CAA97492.1| SDH2 [Saccharomyces cerevisiae] gi|45270268|gb|AAS56515.1| YLL041C [Saccharomyces cerevisiae] gi|151941130|gb|EDN59508.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit [Saccharomyces cerevisiae YJM789] gi|190406009|gb|EDV09276.1| succinate dehydrogenase iron-sulfur protein subunit [Saccharomyces cerevisiae RM11-1a] gi|207343274|gb|EDZ70786.1| YLL041Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256271524|gb|EEU06570.1| Sdh2p [Saccharomyces cerevisiae JAY291] gi|285813385|tpg|DAA09281.1| TPA: Sdh2p [Saccharomyces cerevisiae S288c] gi|323303926|gb|EGA57706.1| Sdh2p [Saccharomyces cerevisiae FostersB] gi|323308174|gb|EGA61424.1| Sdh2p [Saccharomyces cerevisiae FostersO] Length = 266 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 142/234 (60%), Positives = 179/234 (76%), Gaps = 3/234 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK +++YRWNPD P + +Y VDL++CGPMVLD LL IK++ D TLT RRSCREG Sbjct: 31 PRLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREG 90 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC K ++ + +YPLPHM ++KDLV D+++FY Q++SI+P+ Sbjct: 91 ICGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPY 150 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L+ S PK E+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAYR Sbjct: 151 LQRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYR 210 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 WLIDSRD+ R L + LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 211 WLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264 >gi|271499750|ref|YP_003332775.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech586] gi|270343305|gb|ACZ76070.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech586] Length = 238 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y ++ + M+L L + + DPTL RRSCREG+CGS Sbjct: 3 VEFSIYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 G+N++G N LAC+ + ++ I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 63 DGLNMNGKNGLACITPVSTLRNGNNKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P++E LQS E R+K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NNGKNPPSREHLQSPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RLD+L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 183 IDSRDTETKARLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|241760401|ref|ZP_04758496.1| succinate dehydrogenase iron-sulfur subunit [Neisseria flavescens SK114] gi|261377706|ref|ZP_05982279.1| succinate dehydrogenase iron-sulfur subunit [Neisseria cinerea ATCC 14685] gi|241319279|gb|EER55757.1| succinate dehydrogenase iron-sulfur subunit [Neisseria flavescens SK114] gi|269145979|gb|EEZ72397.1| succinate dehydrogenase iron-sulfur subunit [Neisseria cinerea ATCC 14685] Length = 235 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 122/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 65 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 235 >gi|156057307|ref|XP_001594577.1| hypothetical protein SS1G_04384 [Sclerotinia sclerotiorum 1980] gi|154702170|gb|EDO01909.1| hypothetical protein SS1G_04384 [Sclerotinia sclerotiorum 1980 UF-70] Length = 301 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 141/244 (57%), Positives = 180/244 (73%), Gaps = 5/244 (2%) Query: 17 IWNAPTGEKN--LKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 P + N +K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPT Sbjct: 57 TVKEPETDSNSLIKTFHIYRWNPDEPASKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPT 116 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 LT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+V D++ F Sbjct: 117 LTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQF 176 Query: 133 YSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Y Q++SI+P+L+ P KE LQS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YL Sbjct: 177 YKQYKSIKPYLQHTDPAPGGKEYLQSKEERKKLDGLYECILCACCSTSCPSYWWNSEEYL 236 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP AIA+IK Sbjct: 237 GPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGLAIAEIK 296 Query: 252 MMLL 255 + Sbjct: 297 KEMA 300 >gi|50085917|ref|YP_047427.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter sp. ADP1] gi|49531893|emb|CAG69605.1| succinate dehydrogenase, iron-sulfur subunit [Acinetobacter sp. ADP1] Length = 236 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 165/232 (71%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR++PD P M T+ ++L + M+LD LL +K D TLT RRSCREGICG Sbjct: 5 TRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ ++ D+ I + PLP + VIKDLVVDM+ FY Q+ I+P+L Sbjct: 64 SDGVNINGKNGLACLWNLNDLPEKIVIRPLPGLPVIKDLVVDMNQFYDQYDKIQPFLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+ ++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDS Sbjct: 124 QPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL L+DPF L+RC IMNC CPKGLNP KAI I+ ML D+ Sbjct: 184 RDTATQDRLSRLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLFDQA 235 >gi|304387744|ref|ZP_07369924.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis ATCC 13091] gi|304338220|gb|EFM04350.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis ATCC 13091] Length = 242 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 72 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 242 >gi|332306148|ref|YP_004433999.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173477|gb|AEE22731.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 236 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 161/233 (69%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + DPTL+ RRSCREG+CGS Sbjct: 4 TFSVYRYNPDVDNAPRMQDYKLEVEEGQDMMVLDALIALKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DLVVDM+ FY+Q+ I+P+L + Sbjct: 64 GVNMNGKNGLACITPLSALGNKKIVIRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDN 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L DS Sbjct: 124 NQPPAREFLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD +RL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 RDTATEQRLGDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLQRAV 236 >gi|225075121|ref|ZP_03718320.1| hypothetical protein NEIFLAOT_00120 [Neisseria flavescens NRL30031/H210] gi|261401138|ref|ZP_05987263.1| succinate dehydrogenase iron-sulfur subunit [Neisseria lactamica ATCC 23970] gi|319637652|ref|ZP_07992418.1| succinate dehydrogenase iron-sulfur protein [Neisseria mucosa C102] gi|224953605|gb|EEG34814.1| hypothetical protein NEIFLAOT_00120 [Neisseria flavescens NRL30031/H210] gi|269208916|gb|EEZ75371.1| succinate dehydrogenase iron-sulfur subunit [Neisseria lactamica ATCC 23970] gi|309380086|emb|CBX21497.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|317400807|gb|EFV81462.1| succinate dehydrogenase iron-sulfur protein [Neisseria mucosa C102] Length = 235 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 122/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 65 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 235 >gi|187921484|ref|YP_001890516.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia phytofirmans PsJN] gi|187719922|gb|ACD21145.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia phytofirmans PsJN] Length = 234 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 131/232 (56%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD LL +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALLK-LKAVDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+++M D+ I + PLP + VI+DL+VDM+ F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLQNMNDLPQKIVLRPLPGLPVIRDLIVDMTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|323347581|gb|EGA81848.1| Sdh2p [Saccharomyces cerevisiae Lalvin QA23] Length = 266 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 141/234 (60%), Positives = 178/234 (76%), Gaps = 3/234 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK +++YRWNPD P + +Y VDL++CGPMVLD LL IK++ D TLT RRSCREG Sbjct: 31 PRLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREG 90 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC K ++ + +YPLPHM ++KDLV D+++FY Q++SI+P+ Sbjct: 91 ICGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPY 150 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L+ S P E+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAYR Sbjct: 151 LQRSSFPXDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYR 210 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 WLIDSRD+ R L + LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 211 WLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264 >gi|325202261|gb|ADY97715.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M01-240149] Length = 232 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 3 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 62 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 121 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 122 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD+L DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 182 TITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 232 >gi|50285775|ref|XP_445316.1| hypothetical protein [Candida glabrata CBS 138] gi|51701395|sp|Q6FWS8|DHSB_CANGA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|49524620|emb|CAG58222.1| unnamed protein product [Candida glabrata] Length = 253 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 143/237 (60%), Positives = 177/237 (74%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 T LK ++IYRWNPD P + Y VDL++CGPMVLD LL IKN+ D TLT RRSC Sbjct: 15 TSVPRLKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSC 74 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC K +D +YPLPHM ++KDLV D++ FY Q++SI Sbjct: 75 REGICGSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSI 134 Query: 140 EPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ P KE+LQS +DR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+L+Q Sbjct: 135 QPYLQRTDYPADGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQ 194 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRWLIDSRD+ R L++ LYRCHTIMNCT++CPKGLNP ++IA+IK L Sbjct: 195 AYRWLIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKKQLA 251 >gi|254514200|ref|ZP_05126261.1| succinate dehydrogenase, iron-sulfur subunit [gamma proteobacterium NOR5-3] gi|219676443|gb|EED32808.1| succinate dehydrogenase, iron-sulfur subunit [gamma proteobacterium NOR5-3] Length = 235 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 162/234 (69%), Gaps = 2/234 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M T+ VD MVLD L IK + D ++T RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAEPSMQTFEVDTGGKDVMVLDVLEEIKARQDASVTYRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S G+N++G N LAC+ + + PLP + VI+DLVVDMS FY+Q+ ++P+L+ Sbjct: 61 SDGLNMNGKNGLACITPLSETVKNNRLVIRPLPGLPVIRDLVVDMSMFYAQYEKVQPYLQ 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN DR++GPA LLQ+YR+L Sbjct: 121 NATPAPAIERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDRFIGPAGLLQSYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERL L+DPF ++RCH I NC CPKGLNP +AI I+ MLL R Sbjct: 181 DSRDTATEERLSRLDDPFSVFRCHGIQNCVNVCPKGLNPTRAIGHIRSMLLKRA 234 >gi|332535005|ref|ZP_08410821.1| succinate dehydrogenase iron-sulfur protein [Pseudoalteromonas haloplanktis ANT/505] gi|332035572|gb|EGI72065.1| succinate dehydrogenase iron-sulfur protein [Pseudoalteromonas haloplanktis ANT/505] Length = 238 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 5/236 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ +YR+NPD P M Y + + M++ L + + DPTL+ RRSCREG+CGS Sbjct: 4 VQFSVYRYNPDVDNAPRMQEYTLQTEEGHDMMVLDALILLKEQDPTLSFRRSCREGVCGS 63 Query: 88 CGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 G+N++G N LAC+ K+ KG I V PLP + V++DLV+DMS FY+Q+ ++P+L Sbjct: 64 DGVNMNGKNGLACITPLSTLQKNGKGKIVVRPLPGLPVVRDLVIDMSQFYTQYEKVKPYL 123 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P + LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 124 INDQPAAGER-LQSIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+D F ++RCH+IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 183 ADSRDTATEERLADLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGQIKSMLLNRAV 238 >gi|119503175|ref|ZP_01625259.1| succinate dehydrogenase iron-sulfur subunit [marine gamma proteobacterium HTCC2080] gi|119460821|gb|EAW41912.1| succinate dehydrogenase iron-sulfur subunit [marine gamma proteobacterium HTCC2080] Length = 235 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 128/234 (54%), Positives = 161/234 (68%), Gaps = 2/234 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + IYR+NP+ P M + D + MVLD L IK D ++T RRSCREG+CG Sbjct: 1 MLQVSIYRYNPEVDSAPHMQEFEFDTEGKDLMVLDVLEAIKAGHDSSVTYRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S G+NI+G N LAC+ + V PLP + VI+DLVVDMS FY+Q+ I+P+LK Sbjct: 61 SDGLNINGKNGLACITPLSETVKNDKLVVRPLPGLPVIRDLVVDMSLFYAQYEKIQPFLK 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 SP PA E LQS EDR ++DGLYEC++CACCSTSCPS+WWN DR++GPA LLQAYR+L Sbjct: 121 NNSPAPAIERLQSPEDRSQLDGLYECILCACCSTSCPSFWWNPDRFIGPAGLLQAYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+RD ERL L+DPF ++RCH I NC CPKGLNP KAI I+ MLL+R Sbjct: 181 DTRDTATDERLSKLDDPFSVFRCHGIQNCVNVCPKGLNPTKAIGHIRTMLLNRA 234 >gi|332977195|gb|EGK13992.1| succinate dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 236 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 120/232 (51%), Positives = 162/232 (69%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M TY ++L + M+LD LL +K K D ++T RRSCREGICG Sbjct: 5 TRTIEIYRYDPDKDAAPYMQTYTIELLDSDRMLLDVLLRLK-KQDESITFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S G+NI+G N LAC+ +M + I V PLP + V++DLVVDM+ FY Q+ + P+L Sbjct: 64 SDGVNINGKNGLACLINMNTLPEKITVRPLPGLPVVRDLVVDMNQFYEQYEKVHPYLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P E LQS EDR+K++GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++ DS Sbjct: 124 QPAPPTERLQSPEDREKLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFVADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD RL ++DPF L+RC IMNC CPKGLNP +AI ++ +LL++ Sbjct: 184 RDSDTQARLARMDDPFSLFRCRGIMNCVAVCPKGLNPTRAIGHLRNLLLEQA 235 >gi|255721639|ref|XP_002545754.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240136243|gb|EER35796.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 263 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 146/237 (61%), Positives = 179/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 LK++++YRWNPD P M TY VDL+ CGPMVLD LL IKN+ D TLTLRRSC Sbjct: 25 EKAPRLKKFQVYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRRSC 84 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC + +D + VYPLPHM V++DLV D++HFY Q++SI Sbjct: 85 REGICGSCAMNIGGRNTLACLCRIDQDETKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSI 144 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 EP+L+ +P +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+L+Q Sbjct: 145 EPYLQRDSNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVLMQ 204 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRWLIDSRD+ R L++ LYRCHTIMNCT++CPKGLNP +AIA++K L Sbjct: 205 AYRWLIDSRDQATASRKAMLQNSMSLYRCHTIMNCTKTCPKGLNPGRAIAEVKKQLA 261 >gi|270303918|gb|ACZ71182.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum lycopersicum] Length = 274 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 145/234 (61%), Positives = 177/234 (75%), Gaps = 3/234 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + NLK ++IYRW PDN G P + Y +DL CGPMVLD L+ IKN+IDPTLT RRSCR Sbjct: 38 ESKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR 97 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++SIEP Sbjct: 98 EGICGSCAMNIDGCNGLACLTKISS-DSESTITPLPHMFVIKDLVVDMTNFYNQYKSIEP 156 Query: 142 WLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WLK +P P E+ QS DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A Sbjct: 157 WLKRKTPAPTPGKEIPQSKSDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHA 216 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW++DSRDE+ ERLD + D F+LYRCHTI+NC+++CPKGLNP K I IK + Sbjct: 217 NRWIMDSRDEYTQERLDAVNDEFKLYRCHTILNCSRACPKGLNPGKHIQNIKKL 270 >gi|15676844|ref|NP_273989.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis MC58] gi|161869864|ref|YP_001599033.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis 053442] gi|218768035|ref|YP_002342547.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis Z2491] gi|254804834|ref|YP_003083055.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis alpha14] gi|7226190|gb|AAF41357.1| succinate dehydrogenase, iron-sulfur protein [Neisseria meningitidis MC58] gi|121052043|emb|CAM08352.1| putative succinate dehydrogenase iron-sulphur protein [Neisseria meningitidis Z2491] gi|161595417|gb|ABX73077.1| succinate dehydrogenase iron-sulphur protein [Neisseria meningitidis 053442] gi|254668376|emb|CBA05470.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis alpha14] gi|254671326|emb|CBA08730.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis alpha153] gi|254672875|emb|CBA07137.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis alpha275] gi|261392701|emb|CAX50274.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis 8013] gi|316985354|gb|EFV64303.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis H44/76] gi|319410284|emb|CBY90626.1| succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis WUE 2594] gi|325132166|gb|EGC54862.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M6190] gi|325136113|gb|EGC58722.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M0579] gi|325140159|gb|EGC62686.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis CU385] gi|325144257|gb|EGC66562.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M01-240013] gi|325206218|gb|ADZ01671.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis M04-240196] Length = 235 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 65 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 235 >gi|83718183|ref|YP_438862.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia thailandensis E264] gi|167577227|ref|ZP_02370101.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia thailandensis TXDOH] gi|167615386|ref|ZP_02384021.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia thailandensis Bt4] gi|257141949|ref|ZP_05590211.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia thailandensis E264] gi|83652008|gb|ABC36072.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia thailandensis E264] Length = 233 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 171/232 (73%), Gaps = 2/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++ M+LD L+ +K+ +D TL+ RRSCREG+CGS Sbjct: 4 RIFEIYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKS-VDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI P+L Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIRPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 122 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D GERLDNL+DP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 182 DRATGERLDNLDDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRTV 233 >gi|212635737|ref|YP_002312262.1| succinate dehydrogenase iron-sulfur subunit [Shewanella piezotolerans WP3] gi|212557221|gb|ACJ29675.1| Succinate dehydrogenase putative iron sulphur subunit [Shewanella piezotolerans WP3] Length = 235 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 166/233 (71%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y +++D MVLD L+ +K ++D TL+ RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMKDYTLEVDEGTDMMVLDALMKLK-ELDSTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K I + PLP M V++DL+VD++ FY+Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPVSTFKNKKIEIRPLPGMPVVRDLIVDLTQFYTQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKTPAREHLQSPEEREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|121634753|ref|YP_974998.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis FAM18] gi|120866459|emb|CAM10205.1| putative succinate dehydrogenase iron-sulphur protein [Neisseria meningitidis FAM18] Length = 243 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 14 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 72 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 73 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 132 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 133 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 192 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 193 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 243 >gi|62258024|gb|AAX77761.1| unknown protein [synthetic construct] Length = 268 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 29 VRFKIYRYNPEVDKKPYYDEYTVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 87 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+VDM FY + ++P+L Sbjct: 88 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVDMKQFYKNYEKVKPYLINDD 147 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 148 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 207 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 208 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKNV 259 >gi|209954761|dbj|BAG80571.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae] gi|209954763|dbj|BAG80572.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae] Length = 278 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 177/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P+ K + IYRWNPD P M +Y +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 37 PNPSETPRTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALIRIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ FY Q+ Sbjct: 97 RSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQY 156 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAI Sbjct: 157 KSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAI 216 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRDE ER L++ +YRC+TI+NC+++CPKGLNPA+AIA+IK ++ Sbjct: 217 LLQSYRWLADSRDEKTAERKHALDNSMSVYRCYTILNCSRTCPKGLNPARAIAEIKKLMA 276 >gi|171687223|ref|XP_001908552.1| hypothetical protein [Podospora anserina S mat+] gi|170943573|emb|CAP69225.1| unnamed protein product [Podospora anserina S mat+] Length = 285 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 141/237 (59%), Positives = 180/237 (75%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + NLK ++IYRWNPD P M +Y +DL+ GPMVLD L+ IKN+IDPTLT RRSC Sbjct: 48 SEQANLKTFQIYRWNPDQPSEKPKMQSYTLDLNKTGPMVLDALIRIKNEIDPTLTFRRSC 107 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+GTNTLAC + + K + +YPLPH V+KDLV D++ FY Q++SI Sbjct: 108 REGICGSCAMNINGTNTLACLCRIPNEDKADMKIYPLPHTYVVKDLVPDLTQFYKQYKSI 167 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+L+ +P +E Q+ DR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ Sbjct: 168 KPYLQRDTPAPDGREYRQTKADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQ 227 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +YRWL+DSRDE +R D L + LYRCHTI+NCT++CPKGLNP +AI IK + Sbjct: 228 SYRWLVDSRDEKTLQRQDALNNSMSLYRCHTILNCTRTCPKGLNPGQAIQSIKKQMA 284 >gi|49081972|gb|AAT50386.1| PA1584 [synthetic construct] Length = 236 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 162/233 (69%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD + MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDKDAAPYMQDFQVDTNGKDVMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + G + + PLP + VI+DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNINGKNGLACITPLSAAGLKGGKLVIRPLPGLPVIRDLVVDMSVFYKQYEKVKPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 QNDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 ADSRDTKTEERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 232 >gi|91777245|ref|YP_552453.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia xenovorans LB400] gi|91689905|gb|ABE33103.1| succinate dehydrogenase subunit B [Burkholderia xenovorans LB400] Length = 234 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 173/232 (74%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD LL +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALLK-LKAMDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|119472928|ref|ZP_01614801.1| succinate dehydrogenase iron-sulfur subunit [Alteromonadales bacterium TW-7] gi|119444646|gb|EAW25955.1| succinate dehydrogenase iron-sulfur subunit [Alteromonadales bacterium TW-7] Length = 238 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 119/236 (50%), Positives = 166/236 (70%), Gaps = 5/236 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ +YR+NPD P M Y + +D+ M++ L + + DP+L+ RRSCREG+CGS Sbjct: 4 VQFSVYRYNPDVDNAPRMQDYTLQIDDGHDMMVLDALLLLKEQDPSLSFRRSCREGVCGS 63 Query: 88 CGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 G+N++G N LAC+ + KG I V PLP + V++DLV+DMS FY+Q+ ++P+L Sbjct: 64 DGVNMNGKNGLACITPLSTLQNNGKGTIVVRPLPGLPVVRDLVIDMSQFYTQYEKVKPYL 123 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P + LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 124 INDTPAAGER-LQSIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+D F ++RCH+IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 183 ADSRDTATEERLADLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGQIKSMLLNRSV 238 >gi|308389610|gb|ADO31930.1| putative succinate dehydrogenase iron-sulfur protein [Neisseria meningitidis alpha710] gi|325207986|gb|ADZ03438.1| succinate dehydrogenase iron-sulfur subunit [Neisseria meningitidis NZ-05/33] Length = 235 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 65 MNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD+L DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 235 >gi|251790495|ref|YP_003005216.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya zeae Ech1591] gi|247539116|gb|ACT07737.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya zeae Ech1591] Length = 238 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y ++ + M+L L + + DPTL RRSCREG+CGS Sbjct: 3 VEFSVYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 G+N++G N LAC+ + ++ I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 63 DGLNMNGKNGLACITPVSTLRNGNNKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E R+K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NNGKNPPAREHLQSPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RLD+L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 183 IDSRDTETKSRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|88703463|ref|ZP_01101179.1| succinate dehydrogenase, iron-sulfur protein [Congregibacter litoralis KT71] gi|88702177|gb|EAQ99280.1| succinate dehydrogenase, iron-sulfur protein [Congregibacter litoralis KT71] Length = 235 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 123/234 (52%), Positives = 162/234 (69%), Gaps = 2/234 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M T+ VD MVLD L IK + D ++T RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAEPSMQTFEVDTGGKDVMVLDVLEDIKAQQDASVTYRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S G+N++G N LAC+ + + PLP + VI+DLVVDMS FY+Q+ ++P+L+ Sbjct: 61 SDGLNMNGKNGLACITPLSETVKNNKLVIRPLPGLPVIRDLVVDMSMFYTQYEKVQPYLQ 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN DR++GPA LLQ+YR+L Sbjct: 121 NDTPAPAIERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDRFIGPAGLLQSYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERL L+DPF ++RCH I NC CPKGLNP +AI I+ MLL + Sbjct: 181 DSRDTATDERLSRLDDPFSVFRCHGIQNCVNVCPKGLNPTRAIGHIRSMLLKQA 234 >gi|256087662|ref|XP_002579984.1| succinate dehydrogenase iron-sulfur protein [Schistosoma mansoni] gi|238665485|emb|CAZ36223.1| succinate dehydrogenase iron-sulfur protein, putative [Schistosoma mansoni] Length = 277 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 143/239 (59%), Positives = 176/239 (73%), Gaps = 6/239 (2%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 +K + IYRWNPD P M Y VDL++CGPMVLD L+ IKN+ DPTLT RRSCR Sbjct: 24 SAPRMKTFSIYRWNPDKRGEKPTMQNYQVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCR 83 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNI+G N LAC+ ++ +YPLPHM VIKDL+ DM++FY+Q+R IE Sbjct: 84 EGICGSCAMNIEGRNHLACIWEIDPDINKTTKIYPLPHMYVIKDLIPDMNNFYAQYRFIE 143 Query: 141 PWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P+LK + QS EDR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L Sbjct: 144 PYLKKKNVDEEDIGKKTYYQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVL 203 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LQAYRWL+DSRD++ ERL ++ + LYRCHTIMNCT++CPKGLNP AI +IK ML+ Sbjct: 204 LQAYRWLVDSRDDYTYERLAEFQNKWSLYRCHTIMNCTETCPKGLNPGLAIGEIKKMLI 262 >gi|293397235|ref|ZP_06641508.1| succinate dehydrogenase [Serratia odorifera DSM 4582] gi|291420255|gb|EFE93511.1| succinate dehydrogenase [Serratia odorifera DSM 4582] Length = 238 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYQLEAEEGRDMMLLDALILLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSSLSKGKGKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 V-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKTPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETAARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|294141507|ref|YP_003557485.1| succinate dehydrogenase, iron-sulfur protein [Shewanella violacea DSS12] gi|293327976|dbj|BAJ02707.1| succinate dehydrogenase, iron-sulfur protein [Shewanella violacea DSS12] Length = 235 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 118/232 (50%), Positives = 159/232 (68%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +YR+NPD P M Y +D+ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NIAVYRYNPDVDAKPYMKDYTLDVAEGTDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + K I + PLP M V++D++VD+S FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSTFKGKKIEIRPLPGMPVVRDIIVDLSQFYTQYEKIKPYLINDE 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDSR Sbjct: 124 KTPAREHLQSPEEREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 DTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|270263771|ref|ZP_06192040.1| succinate dehydrogenase iron-sulfur subunit [Serratia odorifera 4Rx13] gi|270042655|gb|EFA15750.1| succinate dehydrogenase iron-sulfur subunit [Serratia odorifera 4Rx13] Length = 238 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 123/234 (52%), Positives = 162/234 (69%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYTLEAEDGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALRKGNNKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETQERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|300120272|emb|CBK19826.2| unnamed protein product [Blastocystis hominis] Length = 265 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 133/233 (57%), Positives = 167/233 (71%), Gaps = 3/233 (1%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + K + I+R+NPD P + Y +DL++CG MVLD L IKN+ DPT RRSCREGI Sbjct: 29 PSYKLFTIFRYNPDKDVKPHYEKYVIDLNDCGTMVLDALFKIKNEQDPTFAFRRSCREGI 88 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNI+G N LAC+ + V PLPHM VIKDL+ DM++FY Q+ SI+PWL+ Sbjct: 89 CGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQ 148 Query: 145 TV---SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 S E LQSHEDR +DGLYEC++CACCSTSCPSYWW+ D+YLGP+IL QAYR Sbjct: 149 KKSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQQAYR 208 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W+ DSRDE ERL +L+D ++LYRCH IMNCT +CPK LNP ++I K+K + Sbjct: 209 WIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKHAI 261 >gi|167627196|ref|YP_001677696.1| succinate dehydrogenase iron-sulfur subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667759|ref|ZP_04755337.1| succinate dehydrogenase iron-sulfur subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876303|ref|ZP_05249013.1| succinate dehydrogenase iron-sulfur subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597197|gb|ABZ87195.1| Succinate dehydrogenase (ubiquinone) [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842324|gb|EET20738.1| succinate dehydrogenase iron-sulfur subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 233 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 123/232 (53%), Positives = 165/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V ++N G VL L IK + DPTL +RRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYTVTVENEGVKVLTALELIK-EQDPTLAMRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + V++DL+VDM FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSIGELKQPIKVNPLPGLPVVRDLIVDMKQFYKNYEKVKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKNV 233 >gi|89573815|gb|ABD77133.1| succinate dehydrogenase complex subunit B [Mus musculus] Length = 239 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 145/226 (64%), Positives = 179/226 (79%), Gaps = 4/226 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 14 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 73 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 74 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 133 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 134 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 193 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 RW+IDSRD+F ERL L+DPF +YRCHTIMNCTQ+CPKGLNP KA Sbjct: 194 RWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKA 239 >gi|315126696|ref|YP_004068699.1| succinate dehydrogenase iron-sulfur subunit [Pseudoalteromonas sp. SM9913] gi|315015210|gb|ADT68548.1| succinate dehydrogenase iron-sulfur subunit [Pseudoalteromonas sp. SM9913] Length = 238 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 5/236 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ +YR+NPD P M Y + + M++ L + + DPTL+ RRSCREG+CGS Sbjct: 4 VQFSVYRYNPDVDNAPRMQDYTLQTEEGQDMMVLDALLLLKEQDPTLSFRRSCREGVCGS 63 Query: 88 CGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 G+N++G N LAC+ K+ KG I V PLP + V++DLV+DMS FY+Q+ ++P+L Sbjct: 64 DGVNMNGKNGLACITPLSTLQKNGKGKIVVRPLPGLPVVRDLVIDMSQFYTQYEKVKPYL 123 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P + LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 124 INDEPAAGER-LQSIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+D F ++RCH+IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 183 ADSRDTATEERLADLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGQIKSMLLNRSV 238 >gi|157369509|ref|YP_001477498.1| succinate dehydrogenase iron-sulfur subunit [Serratia proteamaculans 568] gi|157321273|gb|ABV40370.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Serratia proteamaculans 568] Length = 238 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 162/234 (69%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYSLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + I + PLP + V++DLVVDM FY+Q+ I+P+L+ Sbjct: 64 GINMNGKNGLACITPVSSLTKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPFLQN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETEERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|170090053|ref|XP_001876249.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649509|gb|EDR13751.1| predicted protein [Laccaria bicolor S238N-H82] Length = 263 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 139/230 (60%), Positives = 175/230 (76%), Gaps = 2/230 (0%) Query: 28 KEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y +DL+ GPM+LD L+ IKN++DPTLT RRSCREGICG Sbjct: 32 KEFKIYRWNPDEPATKPTLQSYKIDLNQTGPMILDALIKIKNEVDPTLTFRRSCREGICG 91 Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDG NTLAC + ++ +YPLPHM ++KDLV D++ FY Q++SIEPWL+ Sbjct: 92 SCAMNIDGQNTLACLCRIDREPAKDTKIYPLPHMYIVKDLVPDLTLFYKQYKSIEPWLQN 151 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P E LQS E+R+K+DG+YEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ D Sbjct: 152 DNPPAEGEFLQSPEERKKLDGMYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIAD 211 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD ER + L++ LYRCHTI NC+++CPKGLNPA AIA IKM L Sbjct: 212 SRDANGAERKERLQNEMSLYRCHTIFNCSRTCPKGLNPAAAIAHIKMELA 261 >gi|332678932|gb|AEE88061.1| Succinate dehydrogenase iron-sulfur protein [Francisella cf. novicida Fx1] Length = 233 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++IYR+NP+ P D Y V+++N G VL L IK + DPTL LRRSCREG+CGS Sbjct: 3 VRFKIYRYNPEVDKKPYYDEYMVEVENEGVKVLTALELIK-EQDPTLALRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + ++K I V PLP + VI+DL+VDM FY + ++P+L Sbjct: 62 DGMNINGKNRLACITSVGELKQPIKVNPLPGLPVIRDLIVDMKQFYKNYEKVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P KE LQS EDR K+DGLYEC++CACC+TSCPS+WWN D+++GP+ LLQAYR++ DSR Sbjct: 122 EPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPDKFIGPSGLLQAYRFIADSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL++L+DPF L+RC TIMNC CPKGLNP +AI KI+ LL + + Sbjct: 182 DTATEQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKSV 233 >gi|152986521|ref|YP_001349044.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas aeruginosa PA7] gi|150961679|gb|ABR83704.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa PA7] Length = 235 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 125/233 (53%), Positives = 162/233 (69%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD + MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDKDAAPYMQDFQVDTNGKDVMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + G + + PLP + VI+DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNINGKNGLACITPLSAAGLKGGKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVKPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 QNDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 ADSRDTKTEERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 232 >gi|15596781|ref|NP_250275.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas aeruginosa PAO1] gi|116049529|ref|YP_791667.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|218892459|ref|YP_002441326.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas aeruginosa LESB58] gi|254234685|ref|ZP_04928008.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa C3719] gi|254239932|ref|ZP_04933254.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa 2192] gi|296390042|ref|ZP_06879517.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas aeruginosa PAb1] gi|313106597|ref|ZP_07792824.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa 39016] gi|9947547|gb|AAG04973.1|AE004586_11 succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa PAO1] gi|115584750|gb|ABJ10765.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa UCBPP-PA14] gi|126166616|gb|EAZ52127.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa C3719] gi|126193310|gb|EAZ57373.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa 2192] gi|218772685|emb|CAW28470.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa LESB58] gi|310879326|gb|EFQ37920.1| succinate dehydrogenase (B subunit) [Pseudomonas aeruginosa 39016] Length = 235 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 162/233 (69%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD + MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDKDAAPYMQDFQVDTNGKDVMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + G + + PLP + VI+DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNINGKNGLACITPLSAAGLKGGKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVKPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 QNDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 ADSRDTKTEERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 232 >gi|260944932|ref|XP_002616764.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Clavispora lusitaniae ATCC 42720] gi|238850413|gb|EEQ39877.1| succinate dehydrogenase iron-sulfur protein, mitochondrial precursor [Clavispora lusitaniae ATCC 42720] Length = 259 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 176/239 (73%), Gaps = 3/239 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A +K+++IYRWNPD P M TY +DL+ CGPMVLD LL IKN+ D TLT RR Sbjct: 19 ATAASPKIKKFQIYRWNPDTPEVAPKMQTYEIDLNACGPMVLDALLKIKNEQDSTLTFRR 78 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI G NTLAC K + +YPLPHM +++DLV D++HFY Q++ Sbjct: 79 SCREGICGSCAMNIGGVNTLACLCKIDANTSKDTKIYPLPHMYIVRDLVPDLTHFYKQYK 138 Query: 138 SIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SI+P+L+ +E LQS EDR K+DGLYEC++CACCSTSCPSYWWN +YLGPA+L Sbjct: 139 SIQPYLQRDDHPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVL 198 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +QAYRWLIDSRD+ R + L++ LYRCHTIMNC+++CPKGLNP +AIA+IK L Sbjct: 199 MQAYRWLIDSRDQASKFRKEMLQNSMSLYRCHTIMNCSRTCPKGLNPGRAIAEIKKQLA 257 >gi|260767664|ref|ZP_05876599.1| succinate dehydrogenase iron-sulfur protein [Vibrio furnissii CIP 102972] gi|260617173|gb|EEX42357.1| succinate dehydrogenase iron-sulfur protein [Vibrio furnissii CIP 102972] gi|315179504|gb|ADT86418.1| succinate dehydrogenase iron-sulfur subunit [Vibrio furnissii NCTC 11218] Length = 235 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 117/232 (50%), Positives = 162/232 (69%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DPT+ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDKKPYMKDYVLEVEEGSDMMVLDALILLKEQDPTIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 G+N++G N LAC+ + +KG I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSAMKGNIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDA 123 Query: 149 -KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDSR Sbjct: 124 LPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 DTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 235 >gi|67523753|ref|XP_659936.1| hypothetical protein AN2332.2 [Aspergillus nidulans FGSC A4] gi|40745287|gb|EAA64443.1| hypothetical protein AN2332.2 [Aspergillus nidulans FGSC A4] gi|259487728|tpe|CBF86624.1| TPA: iron-sulfur protein subunit of succinate dehydrogenase Sdh2, putative (AFU_orthologue; AFUA_5G10370) [Aspergillus nidulans FGSC A4] Length = 273 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 138/240 (57%), Positives = 177/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +A +K++++YRWNPD P M TY +DL GPM+LD L+ IKN+IDPTLT R Sbjct: 32 SAQEPAPQMKKFQVYRWNPDKPSEKPKMQTYELDLKKTGPMMLDALIRIKNEIDPTLTFR 91 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV D++ Y Q+ Sbjct: 92 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTQIYKQY 151 Query: 137 RSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SI+P+L+ + + E QS EDR+K+DGLYEC++C CCSTSCPSYWWNS+ YLGPAI Sbjct: 152 KSIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCFCCSTSCPSYWWNSEEYLGPAI 211 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRWL DSRD+ ER +++ +YRCHTI+NCT++CPKGLNPA+AI++IK ML Sbjct: 212 LLQSYRWLADSRDQKTAERKHAIDNSMSVYRCHTILNCTRTCPKGLNPARAISEIKKMLA 271 >gi|225703018|dbj|BAH30231.1| succinate dehydrogenase iron-sulfur protein subunit [Pholiota nameko] Length = 271 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 179/233 (76%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 LKE++IYRWNPD P + +Y +DL+ GPM+LD L+ IKN++DPTLT RRSCREGIC Sbjct: 37 LKEFKIYRWNPDEPDKKPELQSYKIDLNQTGPMMLDALIKIKNEVDPTLTFRRSCREGIC 96 Query: 86 GSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNI+G NTLAC + +D +YPLPHM V+KDLV DM+ FY Q++SI+PWL+ Sbjct: 97 GSCAMNINGQNTLACLCRIDRDATKNAKIYPLPHMYVVKDLVPDMTLFYKQYKSIQPWLQ 156 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 SP E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ Sbjct: 157 NSSPPEKGEHLQSPEDRRKLDGMYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIA 216 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCT--QSCPKGLNPAKAIAKIKMMLL 255 DSRD+ ER+D L++ +YRCHTI NCT ++CPKGLNPA AIAK+K+ + Sbjct: 217 DSRDDRGAERMDRLQNEMSMYRCHTIFNCTCSRTCPKGLNPAAAIAKMKLEMA 269 >gi|158452935|gb|ABW39793.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] gi|158452937|gb|ABW39794.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] Length = 306 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 141/251 (56%), Positives = 180/251 (71%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S ++ P+ + K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 58 KTSTIQE----PEPSKDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRI 113 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDL Sbjct: 114 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDL 173 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q+RS++P+L+ + +E QS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 174 VPDMTLFYKQYRSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYW 233 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WN + YLGPA+LLQ+YRW+ DSRDE + ER D L + LYRC TI+NC+++CPKGLNPA Sbjct: 234 WNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRCRTILNCSRTCPKGLNPA 293 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 294 LAIAEIKKSMA 304 >gi|295841395|dbj|BAJ07111.1| succinate dehydrogenase subunit B [Corynespora cassiicola] Length = 307 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 176/240 (73%), Gaps = 3/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P + K + IYRWNPD P M TY +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 66 PQPDKDAKTKTFHIYRWNPDEPTSKPKMQTYTLDLNKTGPMMLDALIRIKNELDPTLTFR 125 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC + D +YPLPHM ++KDLV DM+ FY Q+ Sbjct: 126 RSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQY 185 Query: 137 RSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 RS++P+L+ +P +E QS E+R+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+ Sbjct: 186 RSVKPYLQRDTPAPDGREYRQSKEERKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAV 245 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQ+YRW+ DSRDE +R D L + +YRC+TI+NC+++CPKGLNPA AIA+IK + Sbjct: 246 LLQSYRWIADSRDEKTAQRQDALNNSMSMYRCYTILNCSRTCPKGLNPALAIAEIKKSMA 305 >gi|254839133|gb|ACT83445.1| SdhB [Botryotinia fuckeliana] Length = 285 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 45 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 100 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 101 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 160 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 161 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 220 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 W S+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP Sbjct: 221 WISEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPG 280 Query: 245 KAIAK 249 AIA+ Sbjct: 281 LAIAE 285 >gi|59801316|ref|YP_208028.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae FA 1090] gi|268594687|ref|ZP_06128854.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae 35/02] gi|268596983|ref|ZP_06131150.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae FA19] gi|293399176|ref|ZP_06643341.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae F62] gi|59718211|gb|AAW89616.1| putative succinate dehydrogenase [Neisseria gonorrhoeae FA 1090] gi|268548076|gb|EEZ43494.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae 35/02] gi|268550771|gb|EEZ45790.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae FA19] gi|291610590|gb|EFF39700.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae F62] Length = 242 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 72 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 242 >gi|28611029|emb|CAD62367.1| succinate dehydrogenase [Triticum aestivum] Length = 281 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGIC Sbjct: 47 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 106 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+C MNIDG N LAC+ + + PLPHM V+KDLVVDM++FY+Q++S+EPWLK Sbjct: 107 GTCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P A KE+ QS DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKDPPAAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRDEF ERLD++ D F+LYRCHTI NCT +CPKGLNPAK I IK + L Sbjct: 227 IQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 279 >gi|238920750|ref|YP_002934265.1| succinate dehydrogenase iron-sulfur subunit [Edwardsiella ictaluri 93-146] gi|238870319|gb|ACR70030.1| succinate dehydrogenase iron-sulfur subunit [Edwardsiella ictaluri 93-146] Length = 238 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 118/234 (50%), Positives = 159/234 (67%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGQNGLACITPLSALRRGGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLIN 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E+R ++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR+LI Sbjct: 124 DGRTPPAREHLQSPEERARLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD +RLD L+D F ++RCH IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTATTQRLDTLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|261856934|ref|YP_003264217.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halothiobacillus neapolitanus c2] gi|261837403|gb|ACX97170.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halothiobacillus neapolitanus c2] Length = 232 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 126/231 (54%), Positives = 168/231 (72%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y +D++ G M+LD +L IK + D TL++R SCREG+CGS G Sbjct: 3 FSIYRYNPDTDAKPYMQDYELDIEPEGNMLLDAILMIK-EQDETLSVRCSCREGVCGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LACV + ++K I + PL + VI+DLVVDMS F +RS++P+L Sbjct: 62 MNINGKNGLACVTPLSELKQPITLRPLSGLPVIRDLVVDMSQFLDHYRSVKPYLINKDEP 121 Query: 150 -PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 E LQS EDR K+DGLYEC++CACC+T+CPS+WWN D+++GPA LLQAYR++ DSRD Sbjct: 122 GQDTERLQSPEDRAKLDGLYECILCACCTTACPSFWWNPDKFVGPAGLLQAYRFIADSRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ERLD+LEDP+RL+RCH+IMNC CPK LNP +AI KIK +L+ R + Sbjct: 182 QALTERLDDLEDPYRLFRCHSIMNCVDVCPKELNPTQAIGKIKSLLVKRTV 232 >gi|297250645|ref|ZP_06864708.2| succinate dehydrogenase iron-sulfur subunit [Neisseria polysaccharea ATCC 43768] gi|296838411|gb|EFH22349.1| succinate dehydrogenase iron-sulfur subunit [Neisseria polysaccharea ATCC 43768] Length = 242 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 168/231 (72%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYTQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 72 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 242 >gi|262276215|ref|ZP_06054024.1| succinate dehydrogenase iron-sulfur protein [Grimontia hollisae CIP 101886] gi|262220023|gb|EEY71339.1| succinate dehydrogenase iron-sulfur protein [Grimontia hollisae CIP 101886] Length = 237 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 118/234 (50%), Positives = 162/234 (69%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++ + M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NFSVYRYNPDVDDAPHMKGYTLEVPDGSDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + +I + PLP + V++DL++DMS FY + ++P+L Sbjct: 64 GINMNGKNGLACITPLSALMTDQSSIVIRPLPGLPVVRDLIIDMSQFYQNYERVKPYLIN 123 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 S PA+E LQS +DR +DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 DSAPPARENLQSPDDRAHLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH+IMNC CPKGLNP KAI I+ MLL R + Sbjct: 184 SRDTATDERLSDLDDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIRSMLLKRAV 237 >gi|326513000|dbj|BAK03407.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 281 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 144/233 (61%), Positives = 173/233 (74%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGIC Sbjct: 47 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 106 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNIDG N LAC+ + + PLPHM V+KDLVVDM++FY+Q++S+EPWLK Sbjct: 107 GSCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P A KE+ QS DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRDEF ERLD++ D F+LYRCHTI NCT +CPKGLNPAK I IK + L Sbjct: 227 IQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 279 >gi|225452228|ref|XP_002268523.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 276 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 146/238 (61%), Positives = 178/238 (74%), Gaps = 3/238 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K LK + IYRWNPDN P + Y ++L +CGPMVLD L+ IKN++DPTLT RRSCREG Sbjct: 40 AKTLKTFSIYRWNPDNPSKPELQNYQINLKDCGPMVLDALIKIKNEMDPTLTFRRSCREG 99 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC MNIDG N LAC+ + + V PLPHM VIKDLVVDM++FY+Q++SIEPWL Sbjct: 100 ICGSCAMNIDGCNGLACLTKI-PSGESSTVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWL 158 Query: 144 KTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K +P P E+ QS +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A R Sbjct: 159 KRKTPPPTPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANR 218 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W+ DSRDE+ ERLD + D F+LYRCHTI+NC ++CPKGLNP K IA IK + I Sbjct: 219 WISDSRDEYTKERLDAVCDEFKLYRCHTILNCARACPKGLNPGKQIATIKQRHIADAI 276 >gi|269139930|ref|YP_003296631.1| succinate dehydrogenase iron-sulfur subunit [Edwardsiella tarda EIB202] gi|267985591|gb|ACY85420.1| succinate dehydrogenase iron-sulfur subunit [Edwardsiella tarda EIB202] gi|304559765|gb|ADM42429.1| Succinate dehydrogenase iron-sulfur protein [Edwardsiella tarda FL6-60] Length = 238 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 158/234 (67%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDSVPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGQNGLACITPLSALRRGGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLIN 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E+R ++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR+LI Sbjct: 124 DGRTPPAREYLQSPEERARLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLD L+D F ++RCH IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTATAPRLDALDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|325266128|ref|ZP_08132812.1| succinate dehydrogenase iron-sulfur subunit [Kingella denitrificans ATCC 33394] gi|324982358|gb|EGC17986.1| succinate dehydrogenase iron-sulfur subunit [Kingella denitrificans ATCC 33394] Length = 234 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 120/234 (51%), Positives = 170/234 (72%), Gaps = 1/234 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 ++YR+NPD P M Y +++ +LD ++ +K D TL+ RRSCREGIC Sbjct: 2 EKIRLQVYRYNPDKDAKPYMQDYELEIQPSDVKLLDAIMKLKA-QDDTLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ ++ I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDGMNINGKNGLACLTDIRSLQQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P P +E LQ+ E+R ++DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR++ D Sbjct: 121 DTPAPERERLQTQEERAELDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLNAYRFIAD 180 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERLDNL DP+RL+RCHTIMNC +CPK LNP +AI KIK ++L+R + Sbjct: 181 SRDTITNERLDNLNDPYRLFRCHTIMNCVDACPKHLNPTRAIGKIKEIILERMV 234 >gi|294931455|ref|XP_002779883.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239889601|gb|EER11678.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 280 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 171/237 (72%), Gaps = 2/237 (0%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 A + ++ +R+YR++P + P M Y +DL CGPM+LD L+ IK+ D TL RRS Sbjct: 15 ATSSATRMQTFRVYRYDPLKQDKPHMQEYNIDLAQCGPMILDALIKIKDTQDSTLAFRRS 74 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CREGICGSC MNI+G N LAC++ ++ I + PLPH V+KDLV D+S+FY+Q++SI Sbjct: 75 CREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSI 134 Query: 140 EPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EPW + KE QS EDR+K+DG+YEC++CACC TSCPSYWWN + YLGPA+LL Sbjct: 135 EPWLKRRRAKQPGEKEYYQSIEDREKLDGMYECILCACCMTSCPSYWWNPEYYLGPAVLL 194 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QAYRW+ DSRDEF ER+ + D RLYRCH IMNCT CPKGL+PAKAIAK+K + Sbjct: 195 QAYRWIADSRDEFTTERMAWINDSMRLYRCHGIMNCTSCCPKGLDPAKAIAKMKAEI 251 >gi|107022875|ref|YP_621202.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia cenocepacia AU 1054] gi|116686882|ref|YP_840129.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia cenocepacia HI2424] gi|170734597|ref|YP_001773711.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia cenocepacia MC0-3] gi|105893064|gb|ABF76229.1| succinate dehydrogenase subunit B [Burkholderia cenocepacia AU 1054] gi|116652597|gb|ABK13236.1| succinate dehydrogenase subunit B [Burkholderia cenocepacia HI2424] gi|169820635|gb|ACA95216.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia cenocepacia MC0-3] Length = 235 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 171/232 (73%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + IYR++PD P M Y +D++ M+LD L +K D TL+ RRSCREGICGS Sbjct: 5 RTLHIYRYDPDRDAAPYMQRYEIDVNPDDRMLLDVLGRVKCD-DETLSYRRSCREGICGS 63 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+ + I + PLP + V++DL+VDM+ F++Q+ SI P+L + Sbjct: 64 DAMNINGKNGLACLTNMQTLPREIVLRPLPGLPVVRDLIVDMTDFFNQYHSIRPYLINDT 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R ++DGLYEC++CACCSTSCPSYWWN D+++GPA LLQAYR++ DSR Sbjct: 124 TPPARERLQSPEERDQLDGLYECILCACCSTSCPSYWWNPDKFVGPAGLLQAYRFIADSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERLD+LEDP+RL+RC TIMNCT CPKGLNP KAI++I+ ML+ R + Sbjct: 184 DLATAERLDDLEDPYRLFRCRTIMNCTDVCPKGLNPTKAISEIRTMLVRRTV 235 >gi|167624412|ref|YP_001674706.1| succinate dehydrogenase iron-sulfur subunit [Shewanella halifaxensis HAW-EB4] gi|167354434|gb|ABZ77047.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella halifaxensis HAW-EB4] Length = 235 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 166/233 (71%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y ++++ MVLD LL +K ++DPTL RRSCREG+CGS Sbjct: 4 EFAVYRYNPDVDTKPYMKDYSLEVEEGTDMMVLDALLKLK-ELDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K I + PLP M V++DL+VD++ FY+Q+ I+P+L Sbjct: 63 DGINMNGKNGLACITPVSTFKGNKIEIRPLPGMPVVRDLIVDLTQFYTQYEKIKPFLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 EKTPAREHLQSPEEREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSGLDDAYSVFRCHGIMNCIDVCPKGLNPTKAIGHIKSMLLQRAV 235 >gi|145588946|ref|YP_001155543.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047352|gb|ABP33979.1| succinate dehydrogenase subunit B [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 234 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 172/235 (73%), Gaps = 2/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +++ + IYR++PD P M Y ++L M+LD L+ +K K D T++ RRSCREG+ Sbjct: 2 SDIRIFEIYRYDPDVDAAPRMQRYELELT-GERMLLDALISLK-KQDETISYRRSCREGV 59 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+G N LAC+ +M + I + PLP + V++DL+VDM+ F+ Q+ SI+P+L Sbjct: 60 CGSDAMNINGKNGLACLTNMLTLPKVITLRPLPGLPVVRDLIVDMTLFFKQYLSIKPYLV 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ Sbjct: 120 NDNPAPEKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE RLDNLEDP+RL+RCHTIMNC CPK LNP KAI KIK +++ R + Sbjct: 180 DSRDEDTARRLDNLEDPYRLFRCHTIMNCVDVCPKHLNPTKAIGKIKELMVRRAV 234 >gi|238757974|ref|ZP_04619155.1| Succinate dehydrogenase iron-sulfur protein [Yersinia aldovae ATCC 35236] gi|238703728|gb|EEP96264.1| Succinate dehydrogenase iron-sulfur protein [Yersinia aldovae ATCC 35236] Length = 238 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 162/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +D + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPYMQDYTLDAEEGRDMMLLDALILLKETDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETPARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|89573819|gb|ABD77135.1| succinate dehydrogenase complex subunit B [Mesocricetus auratus] Length = 247 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 143/223 (64%), Positives = 177/223 (79%), Gaps = 4/223 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 25 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 84 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 85 ICGSCAMNINGGNTLACTRRIDTDLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 144 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 145 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 204 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP Sbjct: 205 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNP 247 >gi|194098445|ref|YP_002001504.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae NCCP11945] gi|239998844|ref|ZP_04718768.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae 35/02] gi|240014241|ref|ZP_04721154.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae DGI18] gi|240016677|ref|ZP_04723217.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae FA6140] gi|240080866|ref|ZP_04725409.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae FA19] gi|240112770|ref|ZP_04727260.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae MS11] gi|240115521|ref|ZP_04729583.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID18] gi|240117816|ref|ZP_04731878.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID1] gi|240121804|ref|ZP_04734766.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID24-1] gi|240123371|ref|ZP_04736327.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID332] gi|240125619|ref|ZP_04738505.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae SK-92-679] gi|240128075|ref|ZP_04740736.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae SK-93-1035] gi|254493630|ref|ZP_05106801.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae 1291] gi|268598838|ref|ZP_06133005.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae MS11] gi|268601196|ref|ZP_06135363.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae PID18] gi|268603516|ref|ZP_06137683.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID1] gi|268681996|ref|ZP_06148858.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae PID332] gi|268684208|ref|ZP_06151070.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae SK-92-679] gi|268686464|ref|ZP_06153326.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae SK-93-1035] gi|193933735|gb|ACF29559.1| succinate dehydrogenase catalytic subunit [Neisseria gonorrhoeae NCCP11945] gi|226512670|gb|EEH62015.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae 1291] gi|268582969|gb|EEZ47645.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae MS11] gi|268585327|gb|EEZ50003.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae PID18] gi|268587647|gb|EEZ52323.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae PID1] gi|268622280|gb|EEZ54680.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae PID332] gi|268624492|gb|EEZ56892.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae SK-92-679] gi|268626748|gb|EEZ59148.1| succinate dehydrogenase iron-sulfur protein [Neisseria gonorrhoeae SK-93-1035] gi|317164131|gb|ADV07672.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae TCDC-NG08107] Length = 235 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 65 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 235 >gi|158452927|gb|ABW39789.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] gi|158452929|gb|ABW39790.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] gi|158452931|gb|ABW39791.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] gi|158452933|gb|ABW39792.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Alternaria alternata] Length = 306 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 141/251 (56%), Positives = 181/251 (72%), Gaps = 7/251 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S ++ P+ + K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 58 KTSTIQE----PEPSKDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRI 113 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPHM V+KDL Sbjct: 114 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDL 173 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V DM+ FY Q+RS++P+L+ + +E QS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 174 VPDMTLFYKQYRSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYW 233 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WN + YLGPA+LLQ+YRW+ DSRDE + ER D L + LYRC+TI+NC+++CPKGLNPA Sbjct: 234 WNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRCYTILNCSRTCPKGLNPA 293 Query: 245 KAIAKIKMMLL 255 AIA+IK + Sbjct: 294 LAIAEIKKSMA 304 >gi|313668606|ref|YP_004048890.1| succinate dehydrogenase iron-sulphur protein [Neisseria lactamica ST-640] gi|313006068|emb|CBN87529.1| putative succinate dehydrogenase iron-sulphur protein [Neisseria lactamica 020-06] Length = 235 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 168/231 (72%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYTQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ SI+P++ +P Sbjct: 65 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ DSRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIADSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV 235 >gi|296159708|ref|ZP_06842531.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. Ch1-1] gi|295890152|gb|EFG69947.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. Ch1-1] Length = 234 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 128/232 (55%), Positives = 174/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++D+ M+LD LL +D TL+ RRSCREG+CGS Sbjct: 4 RTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALLK-LKAVDETLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+++M D+ I + PLP + V++DL+ D + F++Q+ SI+P+L + Sbjct: 63 DAMNINGKNGLACLQNMNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSR Sbjct: 123 PPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 183 DEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 234 >gi|40645271|dbj|BAD06473.1| iron-sulphar subunit protein of succinate dehydrogenase [Lentinula edodes] Length = 272 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 137/230 (59%), Positives = 176/230 (76%), Gaps = 2/230 (0%) Query: 28 KEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y +DL+ GPM+LD L+ IKN+IDPTLT RRSCREGICG Sbjct: 41 KEFKIYRWNPDEPAKKPTLQSYTIDLNQTGPMILDALIKIKNEIDPTLTFRRSCREGICG 100 Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNI+G NTLAC + +D +YPLPHM ++KDLV D++ FY Q++SI+P+L+ Sbjct: 101 SCAMNINGQNTLACLCRIDRDASKDSKIYPLPHMYIVKDLVPDLTQFYKQYKSIQPYLQN 160 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P E LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ D Sbjct: 161 DNPPEKGEFLQSQEERRKLDGLYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIAD 220 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD +R + L++ +YRCHTI NC+++CPKGLNPA AIAKIK+ L Sbjct: 221 SRDSNGAKRKEYLQNELSMYRCHTIFNCSRTCPKGLNPAAAIAKIKLELA 270 >gi|152969295|ref|YP_001334404.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893762|ref|YP_002918496.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae NTUH-K2044] gi|262041213|ref|ZP_06014425.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998777|ref|ZP_08303212.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. MS 92-3] gi|150954144|gb|ABR76174.1| succinate dehydrogenase catalytic subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546078|dbj|BAH62429.1| succinate dehydrogenase catalytic subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041442|gb|EEW42501.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538563|gb|EGF64668.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. MS 92-3] Length = 238 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD ERLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETSERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|109898118|ref|YP_661373.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudoalteromonas atlantica T6c] gi|109700399|gb|ABG40319.1| succinate dehydrogenase subunit B [Pseudoalteromonas atlantica T6c] Length = 236 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 161/232 (69%), Gaps = 2/232 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + +YR+NPD P M Y ++++ M++ L + DPTL+ RRSCREG+CGS G Sbjct: 5 FSVYRYNPDVDNAPRMQDYKLEVEEGQDMMVLDALIALKEQDPTLSFRRSCREGVCGSDG 64 Query: 90 MNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +N++G N LAC+ I V PLP + V++DLVVDM+ FY+Q+ I+P+L + Sbjct: 65 VNMNGKNGLACITPLSALGSKKIVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDNN 124 Query: 149 -KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L DSR Sbjct: 125 QPPAREFLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLADSR 184 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 185 DTATEQRLGDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLQRAV 236 >gi|89573849|gb|ABD77150.1| succinate dehydrogenase complex subunit B [Hippopotamus amphibius] Length = 248 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 144/228 (63%), Positives = 179/228 (78%), Gaps = 4/228 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+NCGPMVLD L+ IKN+ID TLT R Sbjct: 18 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFR 77 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDL+ D+S+FY+Q+ Sbjct: 78 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLIPDLSNFYAQY 137 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 138 KSIEPYLKKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNADKYLGPA 197 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCTQ+CPKGLN Sbjct: 198 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLN 245 >gi|127512583|ref|YP_001093780.1| succinate dehydrogenase iron-sulfur subunit [Shewanella loihica PV-4] gi|126637878|gb|ABO23521.1| succinate dehydrogenase subunit B [Shewanella loihica PV-4] Length = 235 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 161/233 (69%), Gaps = 3/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + IYR+NP+ P M Y +++ D MVLD L+ +K DPTL RRSCREG+CGS Sbjct: 4 KIAIYRYNPEVDTKPYMKDYTLEVADGTDMMVLDVLMQLKV-QDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K + + PLP M V++DL+VD++ FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLIVDLTQFYKQYEKIKPYLIND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDS Sbjct: 123 DKTPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 RDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|22126944|ref|NP_670367.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis KIM 10] gi|45440878|ref|NP_992417.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595490|ref|YP_069681.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pseudotuberculosis IP 32953] gi|108806587|ref|YP_650503.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis Antiqua] gi|108813046|ref|YP_648813.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis Nepal516] gi|145599850|ref|YP_001163926.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis Pestoides F] gi|149366888|ref|ZP_01888922.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis CA88-4125] gi|153948150|ref|YP_001401845.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pseudotuberculosis IP 31758] gi|162420684|ref|YP_001605909.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis Angola] gi|165924723|ref|ZP_02220555.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938284|ref|ZP_02226842.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011615|ref|ZP_02232513.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211519|ref|ZP_02237554.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400038|ref|ZP_02305556.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419712|ref|ZP_02311465.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424205|ref|ZP_02315958.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025191|ref|YP_001721696.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pseudotuberculosis YPIII] gi|186894543|ref|YP_001871655.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pseudotuberculosis PB1/+] gi|218928280|ref|YP_002346155.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis CO92] gi|229841048|ref|ZP_04461207.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843152|ref|ZP_04463298.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229893989|ref|ZP_04509175.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Pestoides A] gi|229903487|ref|ZP_04518600.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Nepal516] gi|270487269|ref|ZP_06204343.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis KIM D27] gi|294503119|ref|YP_003567181.1| succinate dehydrogenase catalytic subunit [Yersinia pestis Z176003] gi|21959985|gb|AAM86618.1|AE013908_1 succinate dehydrogenase, iron sulfur protein [Yersinia pestis KIM 10] gi|45435736|gb|AAS61294.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis biovar Microtus str. 91001] gi|51588772|emb|CAH20386.1| succinate dehydrogenase iron-sulfur protein [Yersinia pseudotuberculosis IP 32953] gi|108776694|gb|ABG19213.1| succinate dehydrogenase subunit B [Yersinia pestis Nepal516] gi|108778500|gb|ABG12558.1| succinate dehydrogenase subunit B [Yersinia pestis Antiqua] gi|115346891|emb|CAL19778.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis CO92] gi|145211546|gb|ABP40953.1| succinate dehydrogenase subunit B [Yersinia pestis Pestoides F] gi|149291262|gb|EDM41337.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis CA88-4125] gi|152959645|gb|ABS47106.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pseudotuberculosis IP 31758] gi|162353499|gb|ABX87447.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis Angola] gi|165913662|gb|EDR32281.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923783|gb|EDR40915.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989563|gb|EDR41864.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207290|gb|EDR51770.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962453|gb|EDR58474.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050746|gb|EDR62154.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057054|gb|EDR66817.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751725|gb|ACA69243.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pseudotuberculosis YPIII] gi|186697569|gb|ACC88198.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pseudotuberculosis PB1/+] gi|229679257|gb|EEO75360.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Nepal516] gi|229689499|gb|EEO81560.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229697414|gb|EEO87461.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703874|gb|EEO90887.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Pestoides A] gi|262361155|gb|ACY57876.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D106004] gi|262365290|gb|ACY61847.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D182038] gi|270335773|gb|EFA46550.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis KIM D27] gi|294353578|gb|ADE63919.1| succinate dehydrogenase catalytic subunit [Yersinia pestis Z176003] gi|320014251|gb|ADV97822.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 238 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +D + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLDAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETASRLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|206576672|ref|YP_002239651.1| succinate dehydrogenase, iron-sulfur subunit [Klebsiella pneumoniae 342] gi|288936493|ref|YP_003440552.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Klebsiella variicola At-22] gi|290510452|ref|ZP_06549822.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. 1_1_55] gi|206565730|gb|ACI07506.1| succinate dehydrogenase, iron-sulfur subunit [Klebsiella pneumoniae 342] gi|288891202|gb|ADC59520.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Klebsiella variicola At-22] gi|289777168|gb|EFD85166.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. 1_1_55] Length = 238 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD ERL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETSERLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|156837593|ref|XP_001642818.1| hypothetical protein Kpol_388p3 [Vanderwaltozyma polyspora DSM 70294] gi|156113390|gb|EDO14960.1| hypothetical protein Kpol_388p3 [Vanderwaltozyma polyspora DSM 70294] Length = 258 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 146/233 (62%), Positives = 182/233 (78%), Gaps = 3/233 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K ++IYRWNPD P + Y VDL++CGPMVLD L+ IKN+ D TLT RRSCREGI Sbjct: 24 RMKSFKIYRWNPDTPSVKPVLQNYQVDLNDCGPMVLDALIKIKNEQDGTLTFRRSCREGI 83 Query: 85 CGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI G+NTLAC K +D + +YPLPHM V+KDLV D+++FY Q++SI+P+L Sbjct: 84 CGSCAMNIGGSNTLACLCKIDQDNTKDLKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYL 143 Query: 144 KTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + S P+ KE+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN + YLGPA+L+QAYRW Sbjct: 144 QRKSFPEDGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRW 203 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LIDSRD+ R + LE+ LYRCHTIMNCT++CPKGLNP KAIA+IK L Sbjct: 204 LIDSRDQASHIRKEMLENSMSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKSLA 256 >gi|313237876|emb|CBY13006.1| unnamed protein product [Oikopleura dioica] Length = 275 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 145/234 (61%), Positives = 180/234 (76%), Gaps = 2/234 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P + KE++IYRWNPD+ G P M+TY VD++ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 PVPVDKGE-KEFQIYRWNPDDGGQPRMETYKVDMNKCGPMVLDALIMIKNEIDPTLTFRR 82 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MNIDG N LAC+ D+ ++PLPHM V+KDLV DM++FY+Q++S Sbjct: 83 SCREGICGSCAMNIDGVNNLACLSYCTDVGKTTKIWPLPHMYVVKDLVPDMNNFYAQYKS 142 Query: 139 IEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 IEPW K E QS DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPAI+ Sbjct: 143 IEPWLKKRDETPRTTENYQSEADRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAIIQ 202 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 QAYRWLIDSRD++ ERL+ + D + +++CHTIMNCT+SCPK LNPA AIA++K Sbjct: 203 QAYRWLIDSRDDYTAERLEKMNDAYSVFKCHTIMNCTKSCPKHLNPAWAIAEVK 256 >gi|171463736|ref|YP_001797849.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193274|gb|ACB44235.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 234 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 172/235 (73%), Gaps = 2/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +++ + IYR++PD P M Y ++L M+LD L+ +K K D T++ RRSCREG+ Sbjct: 2 SDIRIFEIYRYDPDVDAAPRMQRYELELT-GERMLLDALISLK-KQDETISYRRSCREGV 59 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+G N LAC+ +M + I + PLP + V++DL+VDM+ F+ Q+ SI+P+L Sbjct: 60 CGSDAMNINGKNGLACLTNMLTLPRVITLRPLPGLPVVRDLIVDMTLFFKQYLSIKPYLV 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ Sbjct: 120 NENLPPDKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE +RLDNLEDP+RL+RCHTIMNC CPK LNP KAI KIK +++ R + Sbjct: 180 DSRDEETAQRLDNLEDPYRLFRCHTIMNCVDVCPKHLNPTKAIGKIKELMVRRAV 234 >gi|254585531|ref|XP_002498333.1| ZYRO0G07788p [Zygosaccharomyces rouxii] gi|238941227|emb|CAR29400.1| ZYRO0G07788p [Zygosaccharomyces rouxii] Length = 263 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 145/235 (61%), Positives = 181/235 (77%), Gaps = 3/235 (1%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 LK +++YRW+PD P + T+ VDL+ CGPMVLD LL IKN+ D TLTLRRSCRE Sbjct: 27 APRLKNFKVYRWSPDEPSKKPYLQTFQVDLNECGPMVLDALLKIKNEQDATLTLRRSCRE 86 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI G NTLAC K ++ + VYPLPHM ++KDLV D+++FY Q++SI+P Sbjct: 87 GICGSCAMNIGGRNTLACLCKIDQNESKDLKVYPLPHMYIVKDLVPDLTNFYQQYKSIQP 146 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +L+ S P+ KE+LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+LLQAY Sbjct: 147 YLQRKSYPEDGKEILQSVEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLLQAY 206 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RWLIDSRD+ R L++ LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 207 RWLIDSRDQAAQTRKAMLQNTMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKELA 261 >gi|213401559|ref|XP_002171552.1| succinate dehydrogenase iron-sulfur subunit [Schizosaccharomyces japonicus yFS275] gi|211999599|gb|EEB05259.1| succinate dehydrogenase iron-sulfur subunit [Schizosaccharomyces japonicus yFS275] Length = 252 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 139/235 (59%), Positives = 179/235 (76%), Gaps = 2/235 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + N+KE+++YRWNPD P + Y V+L CGPMVLD L+ IKN+ DPTLT RRSC Sbjct: 15 SAADNIKEFQVYRWNPDTPEVKPRLQKYRVNLKECGPMVLDALIKIKNEQDPTLTFRRSC 74 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+G NTLAC + K+ K + +YPLPH ++KDLV D+++FY Q++SI Sbjct: 75 REGICGSCAMNINGCNTLACLCRIQKESKKPVKIYPLPHSYIVKDLVPDLTYFYKQYKSI 134 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P+L+ +E QS EDR K+DGLYEC++CACCSTSCPSYWWNS+ YLGPA+LLQA Sbjct: 135 QPYLQNPDVPEDREFYQSPEDRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQA 194 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD ERLD +++ +YRCHTIMNC ++CPK LNP AIAKIK+++ Sbjct: 195 YRWIIDSRDAATAERLDMMQNSMSVYRCHTIMNCARTCPKSLNPGIAIAKIKLLM 249 >gi|307545703|ref|YP_003898182.1| succinate dehydrogenase, iron-sulfur subunit [Halomonas elongata DSM 2581] gi|307217727|emb|CBV42997.1| succinate dehydrogenase, iron-sulfur subunit [Halomonas elongata DSM 2581] Length = 236 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 126/229 (55%), Positives = 162/229 (70%), Gaps = 3/229 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NP+ P M+ + +D MVLD L +K + D L RRSCREG+CGS Sbjct: 5 QVSLYRYNPETDSAPYMEEFQIDTQGRDIMVLDVLHMVK-EQDSGLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 GMN++G N LAC+ + + KG + + PLP + VI+DLVVDM FY Q+ I+P+L+ Sbjct: 64 GMNMNGKNGLACITPLSEVVKKGKLTLRPLPGLPVIRDLVVDMGLFYKQYERIQPYLQND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L DS Sbjct: 124 NPAPAIERLQSPEDRDKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFLADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RDE ERL LEDPF ++RC IMNC CPKGLNP +AI KI+ MLL Sbjct: 184 RDEATRERLAELEDPFSVFRCRGIMNCVAVCPKGLNPTRAIGKIREMLL 232 >gi|254839135|gb|ACT83446.1| SdhB [Botryotinia fuckeliana] Length = 285 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 45 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 100 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 101 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 160 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 161 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 220 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRC TI+NC+++CPKGLNP Sbjct: 221 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCLTILNCSRTCPKGLNPG 280 Query: 245 KAIAK 249 AIA+ Sbjct: 281 LAIAE 285 >gi|114330869|ref|YP_747091.1| succinate dehydrogenase iron-sulfur subunit [Nitrosomonas eutropha C91] gi|114307883|gb|ABI59126.1| succinate dehydrogenase subunit B [Nitrosomonas eutropha C91] Length = 231 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 122/230 (53%), Positives = 170/230 (73%), Gaps = 1/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R++PD P M Y V+L M+LD L+ IK ID +L+LRRSCREG+CGS Sbjct: 3 FSISRYDPDKDEKPYMQDYDVELAPTDKMLLDALIRIKA-IDDSLSLRRSCREGVCGSDA 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + D++ + + PLP + +I+DL+VDMS F+ Q+ SI+P+L P Sbjct: 62 MNINGRNNLACITPLADLREPVEIRPLPGLPIIRDLIVDMSQFFKQYHSIKPYLINNDPP 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P E LQS +R ++DGLYEC++CACC+++CPS+WWN D+++GPA LLQAYR+L DSRD+ Sbjct: 122 PETERLQSQGERARLDGLYECILCACCTSACPSFWWNPDKFVGPAGLLQAYRFLADSRDQ 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD+LEDP+RL+RCH+IMNC +CPKGLNP AI IK+M+L++ + Sbjct: 182 ATSERLDDLEDPYRLFRCHSIMNCVDACPKGLNPTAAIESIKIMMLNKTV 231 >gi|268529074|ref|XP_002629663.1| C. briggsae CBR-SDHB-1 protein [Caenorhabditis briggsae] Length = 302 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 139/249 (55%), Positives = 182/249 (73%), Gaps = 4/249 (1%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S++ R +K + IYR+NP+ G P + + VDLD CG M+LD L+ IKN Sbjct: 40 SKIARAAAAQPKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKN 99 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 ++DPTLT RRSCREGICGSC MNI G NTLAC K D + +YPLPHM V+KDLV Sbjct: 100 EVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVP 159 Query: 128 DMSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 DM+ FY+Q+ SI+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWW Sbjct: 160 DMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWW 219 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 N+D+YLGPA+L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK LNPAK Sbjct: 220 NADKYLGPAVLMQAYRWVIDSRDDYAQERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAK 279 Query: 246 AIAKIKMML 254 AI +IK +L Sbjct: 280 AIGEIKSLL 288 >gi|89573807|gb|ABD77129.1| succinate dehydrogenase complex subunit B [Sminthopsis douglasi] Length = 240 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 144/226 (63%), Positives = 180/226 (79%), Gaps = 4/226 (1%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 LK++ IYRW+PD G P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 15 PRLKKFAIYRWDPDKPGDKPRMQTYEVDLNRCGPMVLDALIKIKNEMDATLTFRRSCREG 74 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM V+KDLV D+++FY+Q++SI+P+ Sbjct: 75 ICGSCAMNINGGNTLACTRRIDSNLSKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPY 134 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 135 LKKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 194 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLNP KA Sbjct: 195 RWMIDSRDDFTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKA 240 >gi|163752590|ref|ZP_02159770.1| succinate dehydrogenase catalytic subunit [Shewanella benthica KT99] gi|161327519|gb|EDP98725.1| succinate dehydrogenase catalytic subunit [Shewanella benthica KT99] Length = 235 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 120/232 (51%), Positives = 161/232 (69%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +YR+NPD P M Y +++ + M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NIAVYRYNPDVDAKPYMKDYTLEVADGTDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + K I + PLP M VI+D++VD+S FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSSFKGKKIELRPLPGMPVIRDIIVDLSQFYTQYEKIKPYLINDE 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R+++DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LIDSR Sbjct: 124 KTPAREHLQSPEEREQLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 DTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|294637437|ref|ZP_06715727.1| succinate dehydrogenase, iron-sulfur protein [Edwardsiella tarda ATCC 23685] gi|291089378|gb|EFE21939.1| succinate dehydrogenase, iron-sulfur protein [Edwardsiella tarda ATCC 23685] Length = 238 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDSAPHMQDYTLEAEEGRDMMLLDALIRLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPISALRQGGRKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLIN 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR+LI Sbjct: 124 DGRTPQVREYLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD +RLD L+D F ++RCH IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTATAQRLDGLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLHR 236 >gi|238765257|ref|ZP_04626186.1| Succinate dehydrogenase iron-sulfur protein [Yersinia kristensenii ATCC 33638] gi|238696529|gb|EEP89317.1| Succinate dehydrogenase iron-sulfur protein [Yersinia kristensenii ATCC 33638] Length = 238 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETAARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|125982577|ref|XP_001355118.1| GA20284 [Drosophila pseudoobscura pseudoobscura] gi|54643431|gb|EAL32175.1| GA20284 [Drosophila pseudoobscura pseudoobscura] Length = 371 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 140/237 (59%), Positives = 177/237 (74%), Gaps = 6/237 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K + IYRW P P M TY +DL CG MVLD L+ IKN++D TLT RRSCREGIC Sbjct: 121 RIKNFEIYRWQP--GEQPKMQTYAIDLSQCGAMVLDALIKIKNEVDQTLTFRRSCREGIC 178 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNIDGTNTLACV + +YPLPH+ V++DLV D++ FY Q+RSI+PWL+ Sbjct: 179 GSCAMNIDGTNTLACVTPINQSTSGSCRIYPLPHLYVVRDLVPDLTQFYDQYRSIQPWLQ 238 Query: 145 TVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + + LQS EDR K+DGLYEC++CACC TSCPSYWWNSD+YLGPA+L+QA+R Sbjct: 239 RNNIQNEMGKAQYLQSLEDRNKLDGLYECILCACCQTSCPSYWWNSDKYLGPAVLMQAFR 298 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDE +RL L+DP++LYRCHTI+NCT +CPK LNPA+AI ++K +L K Sbjct: 299 WVIDSRDEATEQRLCFLQDPWKLYRCHTILNCTNTCPKNLNPARAIIQLKQLLSGAK 355 >gi|71278688|ref|YP_268943.1| succinate dehydrogenase iron-sulfur subunit [Colwellia psychrerythraea 34H] gi|71144428|gb|AAZ24901.1| succinate dehydrogenase, iron-sulfur protein [Colwellia psychrerythraea 34H] Length = 235 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 113/231 (48%), Positives = 160/231 (69%), Gaps = 1/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y +++ +++ L + + D +L+ RRSCREG+CGS G Sbjct: 5 FSIYRYNPDVDNAPYMKDYELEVPEGSDLMVLDALILLKETDSSLSFRRSCREGVCGSDG 64 Query: 90 MNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +N++G N LAC+ + I + PLP + V++DL++DM+ FY Q+ I+P+L + Sbjct: 65 LNMNGKNGLACITPLSELKADKIILRPLPGLPVVRDLIIDMTQFYQQYEKIKPYLINDAQ 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 A+E +Q+ E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDSRD Sbjct: 125 PAARENIQTIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDSRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD L+D + ++RCH IMNC CPKGLNP KAI IK MLL+R + Sbjct: 185 TATEERLDGLQDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLNRAV 235 >gi|238793885|ref|ZP_04637505.1| Succinate dehydrogenase iron-sulfur protein [Yersinia intermedia ATCC 29909] gi|238726788|gb|EEQ18322.1| Succinate dehydrogenase iron-sulfur protein [Yersinia intermedia ATCC 29909] Length = 238 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M + ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDFELEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETAARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|229589336|ref|YP_002871455.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas fluorescens SBW25] gi|312959842|ref|ZP_07774358.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Pseudomonas fluorescens WH6] gi|229361202|emb|CAY48066.1| succinate dehydrogenase iron-sulfur protein [Pseudomonas fluorescens SBW25] gi|311286008|gb|EFQ64573.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Pseudomonas fluorescens WH6] Length = 234 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 161/235 (68%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLKVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIA--VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI I+ MLL + Sbjct: 180 DSRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLQSGV 234 >gi|269103076|ref|ZP_06155773.1| succinate dehydrogenase iron-sulfur protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162974|gb|EEZ41470.1| succinate dehydrogenase iron-sulfur protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 236 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 157/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +D+ M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSIYRYNPDIDDAPHMKGYTLDVPEGTDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + I + PLP + VI+DL++DM FYS + ++P+L Sbjct: 64 GINMNGKNGLACITPLSTLMTQSTIVIRPLPGLPVIRDLIIDMEQFYSNYAKVKPFLMNE 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS E+R +DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 GIPPAREHLQSPEERAHLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 RDTATDERLSELDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 236 >gi|40645269|dbj|BAD06472.1| iron-sulphar subunit protein of succinate dehydrogenase [Lentinula edodes] Length = 272 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 137/230 (59%), Positives = 176/230 (76%), Gaps = 2/230 (0%) Query: 28 KEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y +DL+ GPM+LD L+ IKN+IDPTLT RRSCREGICG Sbjct: 41 KEFKIYRWNPDEPAKKPTLQSYTIDLNQTGPMILDALIKIKNEIDPTLTFRRSCREGICG 100 Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNI+G NTLAC + +D +YPLPHM ++KDLV D++ FY Q++SI+P+L+ Sbjct: 101 SCAMNINGQNTLACLCRIDRDASKDSKIYPLPHMYIVKDLVPDLTQFYKQYKSIQPYLQN 160 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P E LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ D Sbjct: 161 DNPPEKGEFLQSQEERRKLDGLYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIAD 220 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD +R + L++ +YRCHTI NC+++CPKGLNPA AIAKIK+ L Sbjct: 221 SRDSNGAKRKEYLQNELSMYRCHTIFNCSRTCPKGLNPAAAIAKIKLELA 270 >gi|319997170|gb|ADV91179.1| mitochondrial succinate dehydrogenase iron-sulphur subunit-like protein 2 [Karlodinium micrum] Length = 291 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 128/237 (54%), Positives = 172/237 (72%), Gaps = 2/237 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + ++++ IYR++P+ P + Y +DL CGPM+LD L+ +K+++DPTLT RRSCR Sbjct: 28 SAATQMQKFAIYRYDPEKTARPFLQEYDIDLKQCGPMILDALIKVKDEVDPTLTFRRSCR 87 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNI+G N LAC+ ++ I + PLPH V+KDLV D+++FY+Q++SIEP Sbjct: 88 EGICGSCAMNINGKNGLACLIYIEPDAKPIEIQPLPHSYVVKDLVPDLTNFYNQYKSIEP 147 Query: 142 WLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WLK KE QSHEDR K+DG+YEC++CA C TSCPSYWWN + YLGPA+L+QA Sbjct: 148 WLKRKDEKAPGEKEYYQSHEDRLKLDGMYECILCASCMTSCPSYWWNPEYYLGPAVLMQA 207 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 YRW+ DSRD++ ERL + D +LYRCH IMNCT CPKGL+PAKAI ++K + Sbjct: 208 YRWIADSRDQYTEERLAWVNDTMKLYRCHGIMNCTNCCPKGLDPAKAIVELKAQVAQ 264 >gi|304310236|ref|YP_003809834.1| succinate dehydrogenase, iron-sulfur protein [gamma proteobacterium HdN1] gi|301795969|emb|CBL44170.1| succinate dehydrogenase, iron-sulfur protein [gamma proteobacterium HdN1] Length = 239 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 161/237 (67%), Gaps = 3/237 (1%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + +YR+NP+ P + + V+++ MVLD L IK + D +L RRSCREG+ Sbjct: 4 GKTLKVSVYRYNPEKDQAPYLQDFTVEINGKDMMVLDVLNLIK-EQDTSLAYRRSCREGV 62 Query: 85 CGSCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGS GMN+ G N LAC+ + ++PLP + VI+DLVVDM+ FY+Q+ ++PW Sbjct: 63 CGSDGMNMAGKNGLACITPISQAIRDNKLVIHPLPGLPVIRDLVVDMNQFYTQYEKVKPW 122 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L+ P PA E LQ+ E R+K+D LYEC++CACCS+ CPS+WWN D++LGPA LLQAYR+ Sbjct: 123 LQNDQPAPAIERLQTPEQREKLDELYECILCACCSSGCPSFWWNPDKFLGPAALLQAYRF 182 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L DSRD ERL L+DPF L+RC IMNCT CPKGLNPA+AI I+ ML DR + Sbjct: 183 LSDSRDTHTAERLAALDDPFSLFRCRGIMNCTHVCPKGLNPARAIGHIRTMLFDRGV 239 >gi|319762652|ref|YP_004126589.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicycliphilus denitrificans BC] gi|317117213|gb|ADU99701.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicycliphilus denitrificans BC] Length = 234 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 133/233 (57%), Positives = 179/233 (76%), Gaps = 2/233 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD LL K DP+L+ RRSCREG+CGS Sbjct: 3 RTFKIYRYDPDKDAKPYMQTLQVELDGHERMLLDALLK-LKKQDPSLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +MK ++G I + PLP + VI+DL+VDM+ F++Q+ SI+P+L+ Sbjct: 62 DAMNINGKNGLACLTNMKTLQGDIVLKPLPGLPVIRDLIVDMTQFFNQYHSIKPYLQNDE 121 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P+KE LQS E+R+++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 PTSPSKERLQSPEEREELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ GERLDNLEDP+RL+RCHTIMNC CPKGL PA AI+KIK +++ R I Sbjct: 182 RDKATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLKPAAAISKIKELMVRRAI 234 >gi|294868120|ref|XP_002765391.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239865410|gb|EEQ98108.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 280 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 132/237 (55%), Positives = 171/237 (72%), Gaps = 2/237 (0%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 A + ++ +R+YR++P + P M + +DL CGPM+LD L+ IK+ D TL RRS Sbjct: 15 ATSSATRMQTFRVYRYDPLKQDKPHMQEFNIDLAQCGPMILDALIKIKDTQDSTLAFRRS 74 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CREGICGSC MNI+G N LAC++ ++ I + PLPH V+KDLV D+S+FY+Q++SI Sbjct: 75 CREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSI 134 Query: 140 EPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EPW + KE QS EDR+K+DG+YEC++CACC TSCPSYWWN + YLGPA+LL Sbjct: 135 EPWLKRRRAKQPGEKEYYQSIEDREKLDGMYECILCACCMTSCPSYWWNPEYYLGPAVLL 194 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QAYRW+ DSRDEF ER+ + D RLYRCH IMNCT CPKGL+PAKAIAK+K + Sbjct: 195 QAYRWIADSRDEFTTERMAWINDSMRLYRCHGIMNCTSCCPKGLDPAKAIAKMKAEI 251 >gi|262166198|ref|ZP_06033935.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus VM223] gi|262025914|gb|EEY44582.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus VM223] Length = 236 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 116/233 (49%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDAKPYMKDYILEVEEGSDMMLLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + VI+DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVIRDLIVDMTQFYDNYAKVKPFLIADD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P+ E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSIENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH+IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 236 >gi|88860188|ref|ZP_01134827.1| succinate dehydrogenase catalytic subunit [Pseudoalteromonas tunicata D2] gi|88818182|gb|EAR27998.1| succinate dehydrogenase catalytic subunit [Pseudoalteromonas tunicata D2] Length = 238 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 161/235 (68%), Gaps = 5/235 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ +YR+NPD P M Y ++ + M++ L + DPTL+ RRSCREG+CGS Sbjct: 5 KFSVYRYNPDIDNAPRMQDYTLEAEEGRDMMVLDALLQLKEQDPTLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+N++G N LAC+ K AI + PLP + VI+DL++DM+ F++Q+ ++P+L Sbjct: 65 GLNMNGKNGLACITPLSELTKGSNKAIVIRPLPGLPVIRDLIIDMTQFFTQYEKVKPYLI 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P + QS EDR K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NDTPAAGERY-QSVEDRDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL+R + Sbjct: 184 DSRDTATEERLADLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLNRAV 238 >gi|330811088|ref|YP_004355550.1| succinate dehydrogenase (succinate dehydrogenase iron-sulfur subunit) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379196|gb|AEA70546.1| Succinate dehydrogenase (Succinate dehydrogenase iron-sulfur subunit) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 234 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 161/235 (68%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDQDAAPFMQDFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIA--VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI I+ MLL + Sbjct: 180 DSRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLQSGV 234 >gi|320539325|ref|ZP_08038994.1| putative succinate dehydrogenase, FeS subunit [Serratia symbiotica str. Tucson] gi|320030450|gb|EFW12460.1| putative succinate dehydrogenase, FeS subunit [Serratia symbiotica str. Tucson] Length = 238 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 162/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD +P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDADDSPYMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GINMNGKKGLACITPISSLRKGHDKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKYPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD + ERLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTEKQERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|238752115|ref|ZP_04613598.1| Succinate dehydrogenase iron-sulfur protein [Yersinia rohdei ATCC 43380] gi|238709692|gb|EEQ01927.1| Succinate dehydrogenase iron-sulfur protein [Yersinia rohdei ATCC 43380] Length = 238 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPYMQDYTLEAEEGRDMMLLDALIQLKETDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETSARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|221204954|ref|ZP_03577970.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD2] gi|221174745|gb|EEE07176.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD2] Length = 248 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 126/241 (52%), Positives = 174/241 (72%), Gaps = 1/241 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 T + + + IYR++PD P M Y + + M+LD L +K + D TL+ RR Sbjct: 9 PGDTMDDDTRILHIYRYDPDRDAAPYMQRYEIAVQPDDRMLLDVLGRLKRE-DETLSYRR 67 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGS MNI+G+N LAC+ +MK + I + PLP + V++DL+VDM+ F++Q+ S Sbjct: 68 SCREGICGSDAMNINGSNGLACLTNMKTLPREITLRPLPGLPVVRDLIVDMTDFFNQYHS 127 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+P+L +P P +E LQS +R ++DGLYEC++CACCST CP++WWN D+++GPA LLQ Sbjct: 128 IKPYLINDTPPPERERLQSPAERDQLDGLYECILCACCSTQCPTFWWNPDKFVGPAGLLQ 187 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR++ DSRD GERLDNLEDP+RL+RC TIMNCT CPKGLNPA+AI+ I+ ML+ R Sbjct: 188 AYRFIADSRDLATGERLDNLEDPYRLFRCRTIMNCTSVCPKGLNPARAISNIRAMLVRRA 247 Query: 259 I 259 + Sbjct: 248 V 248 >gi|218675174|ref|ZP_03524843.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli GR56] Length = 222 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 177/221 (80%), Positives = 202/221 (91%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL 98 NP +DT+Y+D+D+CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTL Sbjct: 2 TAQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTL 61 Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 AC K + DIKGA+ +YPLPH+ V+KDLV D+++FY+QHRSIEPWLKTVSP PAKE QSH Sbjct: 62 ACTKGLDDIKGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAKEWKQSH 121 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 EDRQK+DGLYEC++CACCSTSCPSYWWN DRYLGPA+LLQAYRWLIDSRDE GERLDNL Sbjct: 122 EDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNL 181 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 EDPFRLYRCHTIMNC Q+CPKGLNPAKAIA+IK M+++R++ Sbjct: 182 EDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMMVERRV 222 >gi|115474559|ref|NP_001060876.1| Os08g0120000 [Oryza sativa Japonica Group] gi|5688947|dbj|BAA82749.1| succinate dehydrogenase iron-protein subunit (SDHB) [Oryza sativa Japonica Group] gi|5688949|dbj|BAA82750.1| succinate dehydrogenase iron-protein subunit [Oryza sativa Japonica Group] gi|42407915|dbj|BAD09055.1| succinate dehydrogenase iron-protein subunit (SDHB) [Oryza sativa Japonica Group] gi|113622845|dbj|BAF22790.1| Os08g0120000 [Oryza sativa Japonica Group] gi|215737455|dbj|BAG96585.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737456|dbj|BAG96586.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765447|dbj|BAG87144.1| unnamed protein product [Oryza sativa Japonica Group] Length = 281 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 145/235 (61%), Positives = 177/235 (75%), Gaps = 3/235 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGI Sbjct: 47 NTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ + A + PLPHM VIKDLVVDM++FY+Q++S+EPWLK Sbjct: 107 CGSCAMNIDGDNGLACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P+P KE+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW Sbjct: 167 RKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRW 226 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + DSRD+F ERLD++ D F+LYRCHTI NCT +CPKGLNPAK I IK + L+ Sbjct: 227 IQDSRDQFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQLEA 281 >gi|296112298|ref|YP_003626236.1| succinate dehydrogenase subunit B [Moraxella catarrhalis RH4] gi|295919992|gb|ADG60343.1| succinate dehydrogenase subunit B [Moraxella catarrhalis RH4] gi|326561806|gb|EGE12141.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis 7169] gi|326563243|gb|EGE13510.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis 46P47B1] gi|326563357|gb|EGE13622.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis 12P80B1] gi|326565895|gb|EGE16056.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis 103P14B1] gi|326568968|gb|EGE19037.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis BC1] gi|326569267|gb|EGE19328.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis BC7] gi|326571944|gb|EGE21949.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis BC8] gi|326575455|gb|EGE25380.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis 101P30B1] gi|326576456|gb|EGE26364.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis CO72] gi|326577927|gb|EGE27791.1| succinate dehydrogenase iron-sulfur subunit [Moraxella catarrhalis O35E] Length = 236 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 163/232 (70%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M +Y V+L + M+LD LL +K + D TLT RRSCREGICG Sbjct: 5 TRIVEIYRYDPDKDNAPYMQSYTVELLDSDRMLLDVLLRLKRE-DETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S GMNI+G N LAC+ +M + I + PLP + VIKDLVVDM+ FY Q+ + P+L Sbjct: 64 SDGMNINGKNGLACLINMNTLPNKITIRPLPGLPVIKDLVVDMNQFYEQYEKVHPYLINN 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P KE LQS E+R+K++GLYEC++CACCST+CPS+WWN D++LGP+ LL YR++IDS Sbjct: 124 QPAPPKERLQSPEEREKMNGLYECILCACCSTACPSFWWNPDKFLGPSALLNGYRFIIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD RL L+DPF L+RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 184 RDTDTQARLARLDDPFSLFRCRGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 235 >gi|238756028|ref|ZP_04617352.1| Succinate dehydrogenase iron-sulfur protein [Yersinia ruckeri ATCC 29473] gi|238705753|gb|EEP98146.1| Succinate dehydrogenase iron-sulfur protein [Yersinia ruckeri ATCC 29473] Length = 238 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQDYSLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALVNGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETQPRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|221134280|ref|ZP_03560585.1| succinate dehydrogenase catalytic subunit [Glaciecola sp. HTCC2999] Length = 236 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 163/233 (69%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y ++++ M++ L + DPTL+ RRSCREG+CGS Sbjct: 4 NFSIYRYNPDIDDAPRMQEYSLEVEEGQDMMVLDALIALKETDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMN++G N LAC+ KG I V PLP + V++DLVVDM+ FY+Q+ I+P+L Sbjct: 64 GMNMNGKNGLACITPLSALGKGKIVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E +Q E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDS Sbjct: 124 KQPPSREHIQMPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL++L+D F ++RCH IMNC CPKGLNP KAI +IK MLL R + Sbjct: 184 RDTATDERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGQIKSMLLQRAV 236 >gi|73950818|ref|XP_864701.1| PREDICTED: similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) isoform 2 [Canis familiaris] Length = 259 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 142/229 (62%), Positives = 177/229 (77%), Gaps = 4/229 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 31 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 90 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 151 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPK L+P Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKYLSP 259 >gi|192358883|ref|YP_001981990.1| succinate dehydrogenase iron-sulfur subunit [Cellvibrio japonicus Ueda107] gi|190685048|gb|ACE82726.1| succinate dehydrogenase, iron-sulfur protein [Cellvibrio japonicus Ueda107] Length = 234 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 166/232 (71%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + ++YR+NP+ P M TY VD MVLD L +K D +L RRSCREG+CG Sbjct: 1 MLKVQVYRYNPETDNAPYMKTYEVDTQGKDLMVLDVLELLKA-QDQSLAYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+K + + + + PLP + VI+DLVVDM+ FY Q++ IEP+L+ Sbjct: 60 SDGMNINGKNGLACIKPLSECVKSNTLILRPLPGLPVIRDLVVDMTQFYEQYKKIEPYLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD+ +RL NL+DPF ++RCH I NC CPKGLNP +AI I+ MLL Sbjct: 180 DSRDQATQKRLANLDDPFSVFRCHGIQNCVAVCPKGLNPTRAIGHIRNMLLQ 231 >gi|258621145|ref|ZP_05716179.1| succinate dehydrogenase catalytic subunit [Vibrio mimicus VM573] gi|258626220|ref|ZP_05721068.1| succinate dehydrogenase catalytic subunit [Vibrio mimicus VM603] gi|261210017|ref|ZP_05924316.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC341] gi|262170922|ref|ZP_06038600.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus MB-451] gi|262404438|ref|ZP_06080993.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC586] gi|258581575|gb|EEW06476.1| succinate dehydrogenase catalytic subunit [Vibrio mimicus VM603] gi|258586533|gb|EEW11248.1| succinate dehydrogenase catalytic subunit [Vibrio mimicus VM573] gi|260840963|gb|EEX67500.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC341] gi|261891998|gb|EEY37984.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus MB-451] gi|262349470|gb|EEY98608.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC586] Length = 236 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 116/233 (49%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDAKPYMKDYILEVEEGSDMMLLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + VI+DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVIRDLIVDMTQFYDNYAKVKPFLIADD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH+IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 236 >gi|104782662|ref|YP_609160.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas entomophila L48] gi|95111649|emb|CAK16370.1| succinate dehydrogenase, iron-sulfur subunit [Pseudomonas entomophila L48] Length = 234 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 160/232 (68%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M T+ VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVEVYRYNPDTDSAPKMQTFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVKGNKLILRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEDRDKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 DSRDTKTQERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 231 >gi|260772358|ref|ZP_05881274.1| succinate dehydrogenase iron-sulfur protein [Vibrio metschnikovii CIP 69.14] gi|260611497|gb|EEX36700.1| succinate dehydrogenase iron-sulfur protein [Vibrio metschnikovii CIP 69.14] Length = 236 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 115/233 (49%), Positives = 157/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +D+ M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDSKPYMKEYVLDVAEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALKGSKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLISDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ EDR +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 EIPPSREHLQLPEDRAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 236 >gi|257453552|ref|ZP_05618842.1| succinate dehydrogenase iron-sulfur subunit [Enhydrobacter aerosaccus SK60] gi|257449010|gb|EEV23963.1| succinate dehydrogenase iron-sulfur subunit [Enhydrobacter aerosaccus SK60] Length = 236 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 163/232 (70%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I+R++PD P M TY ++L + M+LD L+ +K K+D T++ RRSCREGICG Sbjct: 5 TRTIEIFRYDPDKDAAPRMQTYQIELLDSDRMLLDVLVRLK-KMDETISFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S GMNI+G N L+C+ +M + I + PLP + V++DLVVDM+ FY Q+ + P+L Sbjct: 64 SDGMNINGKNGLSCLINMNTLPQKITLRPLPGLPVVRDLVVDMNQFYEQYEKVHPYLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P E LQS EDR+K++GLYEC++CACCSTSCPS+WWN D++LGP+ LL YR++ DS Sbjct: 124 QPAPPTERLQSPEDREKLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNGYRFVADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL L+DPF L+RC IMNC CPKGLNP KAI ++ MLLD+ Sbjct: 184 RDTSTQERLARLDDPFSLFRCRGIMNCVSVCPKGLNPTKAIGHLRNMLLDQA 235 >gi|302795957|ref|XP_002979741.1| hypothetical protein SELMODRAFT_57580 [Selaginella moellendorffii] gi|300152501|gb|EFJ19143.1| hypothetical protein SELMODRAFT_57580 [Selaginella moellendorffii] Length = 234 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 132/230 (57%), Positives = 172/230 (74%), Gaps = 2/230 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 N+KE+ IYRWNPD NP Y +DL+ CGPMVLD L+ IKN++D LT RRSCREG Sbjct: 2 SSNIKEFSIYRWNPDGSSNPQQQVYKIDLNECGPMVLDALIKIKNEVDQGLTFRRSCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC MNI+G N LAC+ ++ +V PLPHM VIKDLVVD+++FY Q++S+EPWL Sbjct: 62 ICGSCAMNINGKNGLACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEPWL 121 Query: 144 KTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 KT + KE LQS ++R K+DG+YEC++CACC++SCPSYWWN +++LGPA LL A+R Sbjct: 122 KTKTMLEAGQKEHLQSKKERLKLDGMYECILCACCTSSCPSYWWNPEKFLGPAALLHAHR 181 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 W+ DSRDE+ ERL+ + +++ RCHTI NC +CPKGL+PA I KIK Sbjct: 182 WIADSRDEYTRERLEAIAGDYKVGRCHTIRNCENACPKGLSPANQIIKIK 231 >gi|291043977|ref|ZP_06569693.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae DGI2] gi|291012440|gb|EFE04429.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae DGI2] Length = 242 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 72 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ +SRD Sbjct: 132 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIAESRD 191 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 192 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 242 >gi|254839129|gb|ACT83443.1| SdhB [Botryotinia fuckeliana] Length = 282 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 42 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 97 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 98 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 157 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 158 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 217 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRC TI+NC+++CPKGLNP Sbjct: 218 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCRTILNCSRTCPKGLNPG 277 Query: 245 KAIAK 249 AIA+ Sbjct: 278 LAIAE 282 >gi|325525564|gb|EGD03354.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia sp. TJI49] Length = 235 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 172/232 (74%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + IYR++PD P M + +DLD M+LD L +K D TL+ RRSCREGICGS Sbjct: 5 RTLHIYRYDPDRDAQPYMQRFDIDLDPADRMLLDVLGRLKRS-DETLSYRRSCREGICGS 63 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+GTN LAC+ +M+ + I + PLP + V++DL+VDM+ F++Q+ SI+P+L + Sbjct: 64 DAMNINGTNGLACLTNMQSLPREIVLRPLPGLPVVRDLIVDMTDFFNQYHSIKPYLINDT 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS +R ++DGLYEC++CACCST CPSYWWN D+++GPA LLQAYR++ DSR Sbjct: 124 QPPARERLQSPAERDQLDGLYECILCACCSTQCPSYWWNPDKFVGPAGLLQAYRFIADSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERLD+LEDP+RL+RC TIMNC + CPKGL+PA+AI++I+ ML+ R + Sbjct: 184 DLATAERLDDLEDPYRLFRCRTIMNCAEVCPKGLSPARAISEIRAMLVRRAV 235 >gi|123443159|ref|YP_001007133.1| succinate dehydrogenase iron-sulfur subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160917|ref|YP_004297494.1| succinate dehydrogenase iron-sulfur subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090120|emb|CAL12983.1| succinate dehydrogenase iron-sulfur protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604822|emb|CBY26320.1| succinate dehydrogenase iron-sulfur protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665147|gb|ADZ41791.1| succinate dehydrogenase iron-sulfur subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 238 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|59711429|ref|YP_204205.1| succinate dehydrogenase iron-sulfur subunit [Vibrio fischeri ES114] gi|197335902|ref|YP_002155584.1| succinate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] gi|59479530|gb|AAW85317.1| succinate dehydrogenase, Fe-S subunit [Vibrio fischeri ES114] gi|197317392|gb|ACH66839.1| succinate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] Length = 237 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 162/234 (69%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +D++ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NFSIYRYNPDVDNAPHMKAYTLDVEEGSDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + K I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSELADKSEIVIRPLPGLPVVRDLIVDMAQFYENYEKVKPFLISD 123 Query: 147 S-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P++E LQS E+R+ +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GATPPSRENLQSPEEREHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK MLL + + Sbjct: 184 SRDTATNERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLLKKAV 237 >gi|257093962|ref|YP_003167603.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046486|gb|ACV35674.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 237 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 122/236 (51%), Positives = 170/236 (72%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++IYR++PD P M V++D L +L D +L RRSCREG Sbjct: 2 TTSTMQFKIYRYDPDKDNAPYMQDISVEVDFAIDRKLLDILTRLKAKDDSLAYRRSCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGS MNI+G N LAC+ ++KD+K + + PLP + VI+DL+VDM+ F+ Q+ SI+P+L Sbjct: 62 ICGSDAMNINGKNGLACLTEIKDLKQPVVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYL 121 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P+P +E LQS E+R++++GLYEC++CACCSTSCPS+WWN D+++GPA LL AYR++ Sbjct: 122 INEGPRPDRERLQSPEEREELNGLYECILCACCSTSCPSFWWNPDKFVGPAGLLNAYRFI 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RDE ERLD+LEDP+RL+RCH+IMNC CPKGLNP +AI KIK M++ R I Sbjct: 182 ADTRDEATNERLDDLEDPYRLFRCHSIMNCVDVCPKGLNPTRAIGKIKEMMVRRAI 237 >gi|149024456|gb|EDL80953.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_c [Rattus norvegicus] Length = 295 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 143/219 (65%), Positives = 173/219 (78%), Gaps = 4/219 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 39 PRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + G + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 218 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 RW+IDSRDEF ERL L+DPF LYRCHTIMNCTQ+CPK Sbjct: 219 RWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPK 257 >gi|121595117|ref|YP_987013.1| succinate dehydrogenase subunit B [Acidovorax sp. JS42] gi|222111460|ref|YP_002553724.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax ebreus TPSY] gi|120607197|gb|ABM42937.1| succinate dehydrogenase subunit B [Acidovorax sp. JS42] gi|221730904|gb|ACM33724.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidovorax ebreus TPSY] Length = 234 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 127/233 (54%), Positives = 169/233 (72%), Gaps = 2/233 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+ L DPTL+ RRSCREG+CGS Sbjct: 3 RTFKIYRYDPDKDAKPYMQTVEVELDGHERML-LDALLKLKAQDPTLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV- 146 MNI+G N LAC+ +MK + G I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L++ Sbjct: 62 DAMNINGKNGLACLTNMKTLSGDIVLKPLPGLPVIRDLIVDMTQFFKQYHSIKPYLQSDI 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P KE LQS E+R++++GLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 YASPTKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD GERLDNLEDP+RL+RCHTIMNC CPK LNP +AI KIK ++ R I Sbjct: 182 RDTATGERLDNLEDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKELMARRAI 234 >gi|302813399|ref|XP_002988385.1| hypothetical protein SELMODRAFT_47515 [Selaginella moellendorffii] gi|300143787|gb|EFJ10475.1| hypothetical protein SELMODRAFT_47515 [Selaginella moellendorffii] Length = 234 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 132/230 (57%), Positives = 173/230 (75%), Gaps = 2/230 (0%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 N+KE+ IYRWNPD NP Y +DL++CGPMVLD L+ IKN++D LT RRSCREG Sbjct: 2 SSNIKEFSIYRWNPDGSSNPQQQVYKIDLNDCGPMVLDALIKIKNEVDQGLTFRRSCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC MNI+G N LAC+ ++ +V PLPHM VIKDLVVD+++FY Q++S+EPWL Sbjct: 62 ICGSCAMNINGKNALACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEPWL 121 Query: 144 KTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 KT + KE LQS ++R K+DG+YEC++CACC++SCPSYWWN +++LGPA LL A+R Sbjct: 122 KTKTMLEAGQKEHLQSKKERLKLDGMYECILCACCTSSCPSYWWNPEKFLGPAALLHAHR 181 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 W+ DSRDE+ ERL+ + +++ RCHTI NC +CPKGL+PA I KIK Sbjct: 182 WIADSRDEYTRERLEAIAGDYKVGRCHTIRNCENACPKGLSPANQIIKIK 231 >gi|242238589|ref|YP_002986770.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech703] gi|242130646|gb|ACS84948.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech703] Length = 238 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + G I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSTLRGSNGKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS + R+K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQSPDQREKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L D F ++RCH IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETASRLDDLNDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|254468735|ref|ZP_05082141.1| SdhB succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [beta proteobacterium KB13] gi|207087545|gb|EDZ64828.1| SdhB succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [beta proteobacterium KB13] Length = 245 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 119/230 (51%), Positives = 161/230 (70%), Gaps = 1/230 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ +YR++P+ P M Y VDLD+ M+LD L+ IK D TL LR+SCREG+CGS Sbjct: 2 KFSVYRFDPEVDKKPYMKKYEVDLDDGDQMLLDALMKIKQ-QDETLALRKSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GMNI+G N LACV +KD+K + + P+P + VIKDL+VDM F+ + ++P+ Sbjct: 61 GMNINGKNGLACVTKLKDLKEPVVIRPMPGLPVIKDLIVDMDQFFKNYHDVKPYFINNEE 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS EDR+K+DGLYEC++C C+TSCPS+WW D+++GPA LLQ+YR+L DSRD Sbjct: 121 VPKTERLQSPEDRKKLDGLYECILCGACTTSCPSFWWGPDKFMGPAALLQSYRFLADSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ERL+ L+ RL+RCH IMNC CPKGL+PAKAI+ IK + RK Sbjct: 181 QGGEERLEFLDHEDRLFRCHNIMNCADVCPKGLSPAKAISGIKELQFKRK 230 >gi|149191111|ref|ZP_01869370.1| succinate dehydrogenase iron-sulfur subunit [Vibrio shilonii AK1] gi|148835039|gb|EDL52017.1| succinate dehydrogenase iron-sulfur subunit [Vibrio shilonii AK1] Length = 236 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 116/233 (49%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M++ L + + DPTL+ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDNKPYMKAYTLEVDEGSDMMVLDALILLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALEGNEIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLISDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 NLPPSRENLQMPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 236 >gi|238790486|ref|ZP_04634255.1| Succinate dehydrogenase iron-sulfur protein [Yersinia frederiksenii ATCC 33641] gi|238721430|gb|EEQ13101.1| Succinate dehydrogenase iron-sulfur protein [Yersinia frederiksenii ATCC 33641] Length = 238 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLEAEEGRDMMLLDALIQLKETDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236 >gi|269960708|ref|ZP_06175080.1| succinate dehydrogenase catalytic subunit [Vibrio harveyi 1DA3] gi|269834785|gb|EEZ88872.1| succinate dehydrogenase catalytic subunit [Vibrio harveyi 1DA3] Length = 236 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKDYTLEVEEGSDMMLLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALQGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ+ ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQTPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R I Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSI 236 >gi|188534432|ref|YP_001908229.1| succinate dehydrogenase iron-sulfur subunit [Erwinia tasmaniensis Et1/99] gi|188029474|emb|CAO97351.1| Succinate dehydrogenase, iron sulfur protein [Erwinia tasmaniensis Et1/99] Length = 238 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLESEDGRDMMLLDALMRLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQKPPAREHLQQPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|54296565|ref|YP_122934.1| succinate dehydrogenase iron-sulfur subunit [Legionella pneumophila str. Paris] gi|148360813|ref|YP_001252020.1| succinate dehydrogenase iron-sulfur protein subunit B [Legionella pneumophila str. Corby] gi|296106123|ref|YP_003617823.1| succinate dehydrogenase iron-sulfur protein [Legionella pneumophila 2300/99 Alcoy] gi|53750350|emb|CAH11744.1| succinate dehydrogenase, iron sulfur protein [Legionella pneumophila str. Paris] gi|148282586|gb|ABQ56674.1| succinate dehydrogenase iron-sulfur protein subunit B [Legionella pneumophila str. Corby] gi|295648024|gb|ADG23871.1| succinate dehydrogenase iron-sulfur protein [Legionella pneumophila 2300/99 Alcoy] gi|307609338|emb|CBW98822.1| succinate dehydrogenase, iron sulfur protein [Legionella pneumophila 130b] Length = 240 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 163/237 (68%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLD-NCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + IYR+NP+ P M Y +++ PM+L L +K + DP++T RRSCR Sbjct: 2 ADSRNVILSIYRYNPEVDAKPYMKDYEIEIPAKSDPMLLTLLERLKAEQDPSITYRRSCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EG+CGS GMNI+GTN LAC+ + I + PLP VI+DL VDM+ FY Q+ IE Sbjct: 62 EGVCGSDGMNINGTNGLACITHLSQLKTDKIVIRPLPGFPVIRDLAVDMTQFYQQYERIE 121 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L+ PA+E LQS E+R ++DGLYEC++CACC++SCPSYWWN D+++GPA LLQA Sbjct: 122 PYLQNDEVAPARERLQSPEERAQLDGLYECILCACCTSSCPSYWWNPDKFVGPAGLLQAR 181 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+L DSRD+ RLD L+DPF ++RC TIMNCT CPKGLNP +AIAKI+ +L + Sbjct: 182 RFLADSRDKATQHRLDLLQDPFSVFRCRTIMNCTNVCPKGLNPTQAIAKIRTQMLTQ 238 >gi|260440668|ref|ZP_05794484.1| succinate dehydrogenase iron-sulfur subunit [Neisseria gonorrhoeae DGI2] Length = 235 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 169/231 (73%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICGS G Sbjct: 6 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGSDG 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 65 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 124 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ +SRD Sbjct: 125 DADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIAESRD 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 185 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 235 >gi|89573831|gb|ABD77141.1| succinate dehydrogenase complex subunit B [Aotus trivirgatus] Length = 249 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 143/222 (64%), Positives = 175/222 (78%), Gaps = 4/222 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 28 PRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 87 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 88 ICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 147 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 148 LKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 207 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKGLN Sbjct: 208 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLN 249 >gi|330503173|ref|YP_004380042.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas mendocina NK-01] gi|328917459|gb|AEB58290.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas mendocina NK-01] Length = 235 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEKDAAPFMQDFQVDTGGKDIMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + G + + PLP + VI+DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNINGKNGLACITPISAAGLKGGKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVQPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 QNDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 ADSRDTKTAERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 232 >gi|323495093|ref|ZP_08100180.1| succinate dehydrogenase iron-sulfur subunit [Vibrio brasiliensis LMG 20546] gi|323310644|gb|EGA63821.1| succinate dehydrogenase iron-sulfur subunit [Vibrio brasiliensis LMG 20546] Length = 236 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP+++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKDYTLEVEEGSDMMLLDALILLKEQDPSISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKADKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ+ ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQTPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|157375950|ref|YP_001474550.1| succinate dehydrogenase iron-sulfur subunit [Shewanella sediminis HAW-EB3] gi|157318324|gb|ABV37422.1| Succinate dehydrogenase (ubiquinone) [Shewanella sediminis HAW-EB3] Length = 235 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 116/232 (50%), Positives = 157/232 (67%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +YR+NPD P M Y +++ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NIAVYRYNPDVDAKPYMKDYTLEVAEGTDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + K + + PLP M V++D++VD+S FY Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDVIVDLSQFYKQYEKIKPYLINDE 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E R+ +DGLYEC+MCACCST+CPS+WWN D+++GP+ LL AYR+LIDSR Sbjct: 124 KTPAREHLQSPEQREHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL L+D + ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 DTATEERLSELDDAYSVFRCHGIMNCIDVCPKGLNPTKAIGHIKSMLLKRAV 235 >gi|254839131|gb|ACT83444.1| SdhB [Botryotinia fuckeliana] Length = 285 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 45 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 100 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 101 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 160 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSC SYW Sbjct: 161 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCTSYW 220 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP Sbjct: 221 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPG 280 Query: 245 KAIAK 249 AIA+ Sbjct: 281 LAIAE 285 >gi|254839127|gb|ACT83442.1| SdhB [Botryotinia fuckeliana] Length = 285 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 180/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 45 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 100 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 101 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 160 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSCPSYW Sbjct: 161 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYW 220 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRC+TI+NC+++CPKGLNP Sbjct: 221 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCYTILNCSRTCPKGLNPG 280 Query: 245 KAIAK 249 AIA+ Sbjct: 281 LAIAE 285 >gi|304395706|ref|ZP_07377589.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pantoea sp. aB] gi|304357000|gb|EFM21364.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pantoea sp. aB] Length = 238 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 162/234 (69%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDKPRMQDYTLESEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + K I + PLP + V++DLVVDMS FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS ++R+ +DGLYEC++CACCSTSCPS+WWN ++++GPA LL AYR+LI Sbjct: 124 DGENPPAREHLQSPDEREHLDGLYECILCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETEARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|77457840|ref|YP_347345.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas fluorescens Pf0-1] gi|77381843|gb|ABA73356.1| succinate dehydrogenase iron-sulfur protein [Pseudomonas fluorescens Pf0-1] Length = 234 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 161/235 (68%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIA--VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI I+ MLL + Sbjct: 180 DSRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLSSGV 234 >gi|323498614|ref|ZP_08103606.1| succinate dehydrogenase iron-sulfur subunit [Vibrio sinaloensis DSM 21326] gi|323316312|gb|EGA69331.1| succinate dehydrogenase iron-sulfur subunit [Vibrio sinaloensis DSM 21326] Length = 236 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKDYTLEVEEGSDMMLLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKADKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|90416066|ref|ZP_01223999.1| succinate dehydrogenase (B subunit) [marine gamma proteobacterium HTCC2207] gi|90332440|gb|EAS47637.1| succinate dehydrogenase (B subunit) [marine gamma proteobacterium HTCC2207] Length = 234 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 126/232 (54%), Positives = 160/232 (68%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR+NP+ P M + D MVLD L +K + DPTL RRSCREG+CG Sbjct: 1 MLNVSIYRYNPEVDSEPYMQDFEFDTQGKDVMVLDVLEKLKIE-DPTLVFRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI G N LACV KG + + PLP + VI+DLV+DMS FY+Q+ I+P++ Sbjct: 60 SDGMNISGKNGLACVTPLSEAVKKGKLVIRPLPGLPVIRDLVIDMSQFYAQYEKIQPYMI 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS E+R K+DGLYEC++CACCST+CPS+WWN D+++GP+ LLQAYR+L Sbjct: 120 NNTPAPAIERLQSQEERAKLDGLYECILCACCSTACPSFWWNPDKFIGPSGLLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RL NL+DPF ++RCH IMNC Q CPKGLNP KAI I+ ML+ Sbjct: 180 DSRDTATEARLANLDDPFSVFRCHGIMNCVQVCPKGLNPTKAIGHIRDMLVR 231 >gi|311280401|ref|YP_003942632.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacter cloacae SCF1] gi|308749596|gb|ADO49348.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacter cloacae SCF1] Length = 238 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDNRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|270157994|ref|ZP_06186651.1| succinate dehydrogenase iron-sulfur subunit [Legionella longbeachae D-4968] gi|289163740|ref|YP_003453878.1| succinate dehydrogenase, iron sulfur protein [Legionella longbeachae NSW150] gi|269990019|gb|EEZ96273.1| succinate dehydrogenase iron-sulfur subunit [Legionella longbeachae D-4968] gi|288856913|emb|CBJ10727.1| succinate dehydrogenase, iron sulfur protein [Legionella longbeachae NSW150] Length = 240 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 163/237 (68%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLD-NCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + IYR+NP+ P M Y +D+ PM+L L +K + DP++T RRSCR Sbjct: 2 ADSRKLTLSIYRYNPEVDAKPYMKDYELDIPAKSDPMLLTLLERLKAEQDPSITYRRSCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EG+CGS GMNI+GTN LAC+ + + + PLP VI+DL VDMS FY Q+ IE Sbjct: 62 EGVCGSDGMNINGTNGLACITHISQLQTDKVVIRPLPGFPVIRDLAVDMSQFYQQYERIE 121 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L+ PA+E LQS E+R ++DGLYEC++CACC++SCPS+WWN ++++GPA LLQA Sbjct: 122 PYLQNDEVAPARERLQSPEERAQLDGLYECILCACCTSSCPSFWWNPEKFVGPAGLLQAR 181 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+L DSRD+ RL+ L+DPF ++RC +IMNCT CPKGLNP KAI +I++ +L + Sbjct: 182 RFLADSRDKATTHRLEKLQDPFSVFRCRSIMNCTNVCPKGLNPTKAIGEIRVQMLKQ 238 >gi|330824793|ref|YP_004388096.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicycliphilus denitrificans K601] gi|329310165|gb|AEB84580.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicycliphilus denitrificans K601] Length = 234 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 133/233 (57%), Positives = 179/233 (76%), Gaps = 2/233 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++IYR++PD P M T V+LD M+LD LL K DP+L+ RRSCREG+CGS Sbjct: 3 RTFKIYRYDPDKDAKPYMQTLQVELDGHERMLLDALLK-LKKQDPSLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +MK ++G I + PLP + VI+DL+VDM+ F++Q+ SI+P+L+ Sbjct: 62 DAMNINGKNGLACLTNMKTLQGDIVLKPLPGLPVIRDLIVDMTQFFNQYHSIKPYLQNDE 121 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P+KE LQS E+R+++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DS Sbjct: 122 PTSPSKERLQSPEEREELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ GERLDNLEDP+RL+RCHTIMNC CPKGL PA AI+KIK +++ R I Sbjct: 182 RDKVTGERLDNLEDPYRLFRCHTIMNCVDVCPKGLKPAAAISKIKELMVRRAI 234 >gi|54293526|ref|YP_125941.1| succinate dehydrogenase iron-sulfur subunit [Legionella pneumophila str. Lens] gi|53753358|emb|CAH14808.1| succinate dehydrogenase, iron sulfur protein [Legionella pneumophila str. Lens] Length = 240 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 164/237 (69%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLD-NCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + IYR+NP+ P M Y +++ PM+L L +K + DP++T RRSCR Sbjct: 2 ADSRNVILSIYRYNPEVDAKPYMKDYEIEIPAKSDPMLLTLLERLKAEQDPSITYRRSCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EG+CGS GMNI+GTN LAC+ + I + PLP VI+DL VDM+ FY Q+ IE Sbjct: 62 EGVCGSDGMNINGTNGLACITHLSQLKTDKIVIRPLPGFPVIRDLAVDMTQFYQQYERIE 121 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L+ PA+E LQS E+R ++DGLYEC++CACC++SCPSYWWN D+++GPA LLQA Sbjct: 122 PYLQNDEVAPARERLQSPEERAQLDGLYECILCACCTSSCPSYWWNPDKFVGPAGLLQAR 181 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+L DSRD+ RLD L+DPF ++RC TIMNCT CPKGLNPA+AIAKI+ +L + Sbjct: 182 RFLADSRDKATQHRLDLLQDPFSVFRCRTIMNCTNVCPKGLNPAQAIAKIRTQMLTQ 238 >gi|290474112|ref|YP_003466989.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus bovienii SS-2004] gi|289173422|emb|CBJ80199.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus bovienii SS-2004] Length = 238 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LACV + + I + PLP + V++DLVVDMS FY+Q+ I P+L Sbjct: 64 GVNMNGKNGLACVTPVSVLRRGNKKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIRPYLIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETASRLDGLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLK 235 >gi|161522531|ref|YP_001585460.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|189348593|ref|YP_001941789.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|160346084|gb|ABX19168.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|189338731|dbj|BAG47799.1| succinate dehydrogenase iron-sulfur protein [Burkholderia multivorans ATCC 17616] Length = 236 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 125/233 (53%), Positives = 171/233 (73%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M Y + + M+LD L +K + D TL+ RRSCREGICG Sbjct: 5 TRILHIYRYDPDRDAAPYMQRYEITVQPDDRMLLDVLGRLKRE-DETLSYRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G+N LAC+ +MK + I + PLP + V++DL+VDM+ F++Q+ SI+P+L Sbjct: 64 SDAMNINGSNGLACLTNMKTLPREITLRPLPGLPVVRDLIVDMTDFFNQYHSIKPYLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P P +E LQS +R ++DGLYEC++CACCST CP++WWN D+++GPA LLQAYR++ DS Sbjct: 124 TPPPERERLQSPAERDQLDGLYECILCACCSTQCPTFWWNPDKFVGPAGLLQAYRFIADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD GERLDNLEDP+RL+RC TIMNCT CPKGLNPA+AI+ I+ ML+ R + Sbjct: 184 RDLATGERLDNLEDPYRLFRCRTIMNCTSVCPKGLNPARAISNIRAMLVRRAV 236 >gi|195047714|ref|XP_001992397.1| GH24727 [Drosophila grimshawi] gi|193893238|gb|EDV92104.1| GH24727 [Drosophila grimshawi] Length = 331 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 143/253 (56%), Positives = 179/253 (70%), Gaps = 7/253 (2%) Query: 7 PKRSRVKRGKIWNA-PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY 65 PK +++ K+ EK +K IYRW P P M Y +DLD CGPMVLD L+ Sbjct: 60 PKDGSMRQVKVETKLKLNEKRMKTLEIYRWKP--GDQPTMQKYQLDLDECGPMVLDALIK 117 Query: 66 IKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD 124 IK++IDPTLT RRSCREGICGSC MNIDG NTLAC + ++ ++PLPH+ V +D Sbjct: 118 IKSEIDPTLTFRRSCREGICGSCAMNIDGLNTLACIHELDTNVARTSKIHPLPHLYVRRD 177 Query: 125 LVVDMSHFYSQHRSIEPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 LV DM FY+Q++SIEPWL+ + + LQS EDR K+DGLYEC++C CC TSCP Sbjct: 178 LVPDMDEFYNQYQSIEPWLQRDNISEELGRAQYLQSVEDRSKLDGLYECILCGCCQTSCP 237 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 SYWWNSD+YLGPA+L+QAYRW+IDSRDE RL L D ++LYRCHTI+NC +CPK L Sbjct: 238 SYWWNSDKYLGPAVLMQAYRWIIDSRDEAAEHRLGQLIDTWKLYRCHTILNCINTCPKNL 297 Query: 242 NPAKAIAKIKMML 254 NPAKAI ++K +L Sbjct: 298 NPAKAILQLKQLL 310 >gi|300176530|emb|CBK24195.2| Succinate dehydrogenase iron-sulphur subunit (SDHB) [Blastocystis hominis] Length = 273 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 133/242 (54%), Positives = 170/242 (70%), Gaps = 3/242 (1%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 KI + KN K + I+R++ + P + Y VD+++CG MVLD L IKN+ DPT Sbjct: 28 KINATESKPKNYKIFSIFRFDNERDNKPHYEKYAVDMNDCGTMVLDALFKIKNEQDPTFV 87 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNI+G N LAC+ + V PLPH+ VIKDLV D+++FY Q Sbjct: 88 FRRSCREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQ 147 Query: 136 HRSIEPWLKTV---SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + SI+PWL+ S E LQSHEDR +DGLYEC++CACCSTSCPSYWW+ D+YLG Sbjct: 148 YASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLG 207 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P+IL QAYRW+ DSRDE ERL +L+D ++LYRCH IMNCT +CPK LNP ++I K+K Sbjct: 208 PSILQQAYRWIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKK 267 Query: 253 ML 254 + Sbjct: 268 AI 269 >gi|90021752|ref|YP_527579.1| succinate dehydrogenase iron-sulfur subunit [Saccharophagus degradans 2-40] gi|89951352|gb|ABD81367.1| succinate dehydrogenase subunit B [Saccharophagus degradans 2-40] Length = 234 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 129/234 (55%), Positives = 167/234 (71%), Gaps = 3/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M +Y VD MVLD L +K+ DP+L RRSCREG+CG Sbjct: 1 MLKVEVYRYNPETDKEPYMKSYDVDTQGKDLMVLDVLELLKS-QDPSLAYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI G N LAC+ + + KG + + PLP + V++DLVVDM+ FY Q+R IEP+L+ Sbjct: 60 SDGMNIAGKNGLACITPLSECVKKGKLVLRPLPGLPVVRDLVVDMAQFYEQYRKIEPYLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L Sbjct: 120 NNTPAPAIERLQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD +RL NL+DPF ++RCH I NC CPKGLNP +AI I+ MLL R Sbjct: 180 DSRDTATDDRLSNLDDPFSVFRCHGIQNCVDVCPKGLNPTRAIGHIRNMLLQRG 233 >gi|261252263|ref|ZP_05944836.1| succinate dehydrogenase iron-sulfur protein [Vibrio orientalis CIP 102891] gi|260935654|gb|EEX91643.1| succinate dehydrogenase iron-sulfur protein [Vibrio orientalis CIP 102891] Length = 236 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M+L L + + DP+++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKDYTLEVDEGSDMMLLDALILLKEQDPSISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKADKIVIRPLPGLPVVRDLIVDMTQFYDNYSKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ+ ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQTPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|221198692|ref|ZP_03571737.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD2M] gi|221211894|ref|ZP_03584872.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD1] gi|221167979|gb|EEE00448.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD1] gi|221181143|gb|EEE13545.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia multivorans CGD2M] Length = 236 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 125/233 (53%), Positives = 171/233 (73%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M Y + + M+LD L +K + D TL+ RRSCREGICG Sbjct: 5 TRILHIYRYDPDRDAAPYMQRYEIAVQPDDRMLLDVLGRLKRE-DETLSYRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G+N LAC+ +MK + I + PLP + V++DL+VDM+ F++Q+ SI+P+L Sbjct: 64 SDAMNINGSNGLACLTNMKTLPREITLRPLPGLPVVRDLIVDMTDFFNQYHSIKPYLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P P +E LQS +R ++DGLYEC++CACCST CP++WWN D+++GPA LLQAYR++ DS Sbjct: 124 TPPPERERLQSPAERDQLDGLYECILCACCSTQCPTFWWNPDKFVGPAGLLQAYRFIADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD GERLDNLEDP+RL+RC TIMNCT CPKGLNPA+AI+ I+ ML+ R + Sbjct: 184 RDLATGERLDNLEDPYRLFRCRTIMNCTSVCPKGLNPARAISNIRAMLVRRAV 236 >gi|2706555|emb|CAA75895.1| succinate dehydrogenase iron-sulfur subunit [Agaricus bisporus] Length = 245 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 143/230 (62%), Positives = 178/230 (77%), Gaps = 3/230 (1%) Query: 28 KEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y +DL+ CGPM+LD L+ IKN++DPTLT RRSCREGICG Sbjct: 15 KEFKIYRWNPDEPSKKPTLQSYKIDLNQCGPMILDALIKIKNEMDPTLTFRRSCREGICG 74 Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDG NTLAC + ++ VYPLPHM V+KDLV D++ FY Q++SI+PWL+ Sbjct: 75 SCAMNIDGQNTLACLCRIDREGSKDTKVYPLPHMYVVKDLVPDLTLFYKQYKSIQPWLQN 134 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P A E LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D YLGPA L+QAYRW+ D Sbjct: 135 DNPP-AHEHLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQDEYLGPATLMQAYRWIAD 193 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD +R + L++ LYRCHTI NC+++CPKGLNPA AIAKIK+ L Sbjct: 194 SRDTHGAQRKEVLQNEMSLYRCHTIFNCSRTCPKGLNPAAAIAKIKLELA 243 >gi|308186070|ref|YP_003930201.1| succinate dehydrogenase, iron sulfur protein [Pantoea vagans C9-1] gi|308056580|gb|ADO08752.1| succinate dehydrogenase, iron sulfur protein [Pantoea vagans C9-1] Length = 238 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 162/234 (69%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDKPRMQDYTLESEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + V++DLVVDMS FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS ++R+ +DGLYEC++CACCSTSCPS+WWN ++++GPA LL AYR+LI Sbjct: 124 NGENPPAREHLQSPDEREHLDGLYECILCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|259909079|ref|YP_002649435.1| succinate dehydrogenase iron-sulfur subunit [Erwinia pyrifoliae Ep1/96] gi|224964701|emb|CAX56218.1| Succinate dehydrogenase, iron sulfur protein [Erwinia pyrifoliae Ep1/96] gi|283479105|emb|CAY75021.1| succinate dehydrogenase, iron sulfur protein [Erwinia pyrifoliae DSM 12163] gi|310767021|gb|ADP11971.1| succinate dehydrogenase iron-sulfur subunit [Erwinia sp. Ejp617] Length = 238 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 160/234 (68%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLESEDGRDMMLLDALMRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQKPPAREHLQQPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|89573841|gb|ABD77146.1| succinate dehydrogenase complex subunit B [Ceratotherium simum] Length = 250 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 141/226 (62%), Positives = 174/226 (76%), Gaps = 4/226 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 22 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 142 KSIEPYLKKKDESQQGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKG Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTKTCPKG 247 >gi|254839137|gb|ACT83447.1| SdhB [Botryotinia fuckeliana] Length = 285 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 7/245 (2%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYI 66 K S VK A E +K + IYRWNPD P M +Y +DL+ GPM+LD L+ I Sbjct: 45 KTSTVKE----PAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRI 100 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL 125 KN++DPTLT RRSCREGICGSC MNIDG NTLAC + +D K +YPLPH V+KD+ Sbjct: 101 KNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDI 160 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D++ FY Q++SI+P+L+ P KE LQS EDR+K+DGLYEC++CACCSTSC SYW Sbjct: 161 VPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCLSYW 220 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WNS+ YLGPAILLQ+YRWL DSRD+ + ER L++ LYRCHTI+NC+++CPKGLNP Sbjct: 221 WNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPG 280 Query: 245 KAIAK 249 AIA+ Sbjct: 281 LAIAE 285 >gi|146282237|ref|YP_001172390.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas stutzeri A1501] gi|145570442|gb|ABP79548.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas stutzeri A1501] gi|327480485|gb|AEA83795.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas stutzeri DSM 4166] Length = 234 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 156/232 (67%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + V+ D MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDQDEKPFMQDFQVNTDGKDLMVLDVLALIK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIA--VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ + P+L Sbjct: 60 SDGMNINGKNGLACITPLSSVVKGNKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVRPYLM 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LQAYR+L Sbjct: 120 NDTPPPAIERLQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAASLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RL L+DPF ++RC IMNC CPKGLNP KAI I+ MLL Sbjct: 180 DSRDTETENRLAGLDDPFSVFRCRGIMNCVDVCPKGLNPTKAIGHIRNMLLQ 231 >gi|238785857|ref|ZP_04629825.1| Succinate dehydrogenase iron-sulfur protein [Yersinia bercovieri ATCC 43970] gi|238797742|ref|ZP_04641236.1| Succinate dehydrogenase iron-sulfur protein [Yersinia mollaretii ATCC 43969] gi|238713227|gb|EEQ05271.1| Succinate dehydrogenase iron-sulfur protein [Yersinia bercovieri ATCC 43970] gi|238718383|gb|EEQ10205.1| Succinate dehydrogenase iron-sulfur protein [Yersinia mollaretii ATCC 43969] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPHMQEYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTQAIGHIKSMLLQR 236 >gi|322833844|ref|YP_004213871.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rahnella sp. Y9602] gi|321169045|gb|ADW74744.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rahnella sp. Y9602] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 159/235 (67%), Gaps = 4/235 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y ++ M+L L + + DPTL RRSCREG+CGS Sbjct: 3 IEFSIYRYNPDVDDVPYMKDYVLEAKEGRDMMLLDALILLKEQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+N++G N LAC+ + ++ I + PLP + V++DLVVDM FY Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPVSTLRNGSKKIVIRPLPGLPVVRDLVVDMGQFYKQYEKIKPYLL 122 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQ +DR+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NDGKNPPAREHLQMPDDREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 IDSRD RLD+L D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 183 IDSRDTETQSRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQRG 237 >gi|253774305|ref|YP_003037136.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160794|ref|YP_003043902.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B str. REL606] gi|297519614|ref|ZP_06938000.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli OP50] gi|242376486|emb|CAQ31190.1| succinate dehydrogenase iron-sulfur protein, subunit of succinate dehydrogenase [Escherichia coli BL21(DE3)] gi|253325349|gb|ACT29951.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972695|gb|ACT38366.1| succinate dehydrogenase, FeS subunit [Escherichia coli B str. REL606] gi|253976889|gb|ACT42559.1| succinate dehydrogenase, FeS subunit [Escherichia coli BL21(DE3)] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD G RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETGSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|304445589|pdb|2WP9|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant gi|304445593|pdb|2WP9|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant gi|304445597|pdb|2WP9|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ D M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RC +IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCTSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|37525383|ref|NP_928727.1| succinate dehydrogenase iron-sulfur subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784810|emb|CAE13722.1| succinate dehydrogenase iron sulfur protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 122/232 (52%), Positives = 156/232 (67%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDSAPHMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I P+L Sbjct: 64 GLNMNGKNGLACITPVSALRRGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIRPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETASRLDKLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLK 235 >gi|296103347|ref|YP_003613493.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|29418062|gb|AAO39688.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae] gi|295057806|gb|ADF62544.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 120/233 (51%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|295096569|emb|CBK85659.1| succinate dehydrogenase subunit B [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 238 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 120/233 (51%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPISVLQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETENRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|148978237|ref|ZP_01814755.1| succinate dehydrogenase iron-sulfur subunit [Vibrionales bacterium SWAT-3] gi|145962538|gb|EDK27815.1| succinate dehydrogenase iron-sulfur subunit [Vibrionales bacterium SWAT-3] Length = 236 Score = 245 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 116/233 (49%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M+L L + + DPT+ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKEYTLEVDEGSDMMLLDALILLKEQDPTIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYEKVKPFLVSDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA+E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 NVPPARENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|91228427|ref|ZP_01262352.1| succinate dehydrogenase catalytic subunit [Vibrio alginolyticus 12G01] gi|254229708|ref|ZP_04923117.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|262394884|ref|YP_003286738.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|269966051|ref|ZP_06180142.1| succinate dehydrogenase catalytic subunit [Vibrio alginolyticus 40B] gi|91188011|gb|EAS74318.1| succinate dehydrogenase catalytic subunit [Vibrio alginolyticus 12G01] gi|151937753|gb|EDN56602.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|262338478|gb|ACY52273.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|269829358|gb|EEZ83601.1| succinate dehydrogenase catalytic subunit [Vibrio alginolyticus 40B] Length = 236 Score = 245 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDTKPYMKEYTLEVDEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALQGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS +DR +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDDRAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 236 >gi|15800428|ref|NP_286440.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 EDL933] gi|15830003|ref|NP_308776.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 str. Sakai] gi|24112000|ref|NP_706510.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a str. 301] gi|26246692|ref|NP_752732.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli CFT073] gi|30062113|ref|NP_836284.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a str. 2457T] gi|74311248|ref|YP_309667.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei Ss046] gi|82543151|ref|YP_407098.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii Sb227] gi|91209758|ref|YP_539744.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli UTI89] gi|110640933|ref|YP_668661.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 536] gi|110804648|ref|YP_688168.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 5 str. 8401] gi|117622918|ref|YP_851831.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli APEC O1] gi|157156213|ref|YP_001461884.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli E24377A] gi|157160204|ref|YP_001457522.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli HS] gi|168750655|ref|ZP_02775677.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4113] gi|168757177|ref|ZP_02782184.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4401] gi|168764005|ref|ZP_02789012.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4501] gi|168767164|ref|ZP_02792171.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4486] gi|168777540|ref|ZP_02802547.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4196] gi|168779207|ref|ZP_02804214.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4076] gi|168786877|ref|ZP_02811884.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC869] gi|168801367|ref|ZP_02826374.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC508] gi|170020931|ref|YP_001725885.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ATCC 8739] gi|170681087|ref|YP_001742825.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli SMS-3-5] gi|170769118|ref|ZP_02903571.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia albertii TW07627] gi|187732898|ref|YP_001879379.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii CDC 3083-94] gi|188493229|ref|ZP_03000499.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 53638] gi|191167218|ref|ZP_03029037.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B7A] gi|191174070|ref|ZP_03035586.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli F11] gi|193065540|ref|ZP_03046608.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E22] gi|193070666|ref|ZP_03051603.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E110019] gi|194429062|ref|ZP_03061593.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B171] gi|194433987|ref|ZP_03066258.1| succinate dehydrogenase, iron-sulfur subunit [Shigella dysenteriae 1012] gi|194439250|ref|ZP_03071330.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli 101-1] gi|195939065|ref|ZP_03084447.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 str. EC4024] gi|208807205|ref|ZP_03249542.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4206] gi|208814896|ref|ZP_03256075.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4045] gi|208823156|ref|ZP_03263474.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4042] gi|209400050|ref|YP_002269347.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4115] gi|209917975|ref|YP_002292059.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli SE11] gi|215485743|ref|YP_002328174.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O127:H6 str. E2348/69] gi|217324173|ref|ZP_03440257.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. TW14588] gi|218549711|ref|YP_002383502.1| succinate dehydrogenase iron-sulfur subunit [Escherichia fergusonii ATCC 35469] gi|218553251|ref|YP_002386164.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli IAI1] gi|218557640|ref|YP_002390553.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli S88] gi|218688518|ref|YP_002396730.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ED1a] gi|218694148|ref|YP_002401815.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 55989] gi|218699079|ref|YP_002406708.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli IAI39] gi|227884309|ref|ZP_04002114.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 83972] gi|237707314|ref|ZP_04537795.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|254791870|ref|YP_003076707.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 str. TW14359] gi|256021202|ref|ZP_05435067.1| succinate dehydrogenase iron-sulfur subunit [Shigella sp. D9] gi|260842931|ref|YP_003220709.1| succinate dehydrogenase, FeS subunit [Escherichia coli O103:H2 str. 12009] gi|260866855|ref|YP_003233257.1| succinate dehydrogenase, FeS subunit [Escherichia coli O111:H- str. 11128] gi|261224425|ref|ZP_05938706.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254584|ref|ZP_05947117.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str. FRIK966] gi|291281656|ref|YP_003498474.1| Succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|293409098|ref|ZP_06652674.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B354] gi|293432993|ref|ZP_06661421.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli B088] gi|300816372|ref|ZP_07096594.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 107-1] gi|300822988|ref|ZP_07103123.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 119-7] gi|300906981|ref|ZP_07124650.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 84-1] gi|300926127|ref|ZP_07141940.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 182-1] gi|300929472|ref|ZP_07144940.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 187-1] gi|300937819|ref|ZP_07152615.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 21-1] gi|300989866|ref|ZP_07178995.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 45-1] gi|300996430|ref|ZP_07181438.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 200-1] gi|301020815|ref|ZP_07184879.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 69-1] gi|301046048|ref|ZP_07193228.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 185-1] gi|301305210|ref|ZP_07211308.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 124-1] gi|301327916|ref|ZP_07221087.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 78-1] gi|306812867|ref|ZP_07447060.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli NC101] gi|307314811|ref|ZP_07594405.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli W] gi|309797437|ref|ZP_07691829.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 145-7] gi|312965154|ref|ZP_07779391.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 2362-75] gi|312970801|ref|ZP_07784980.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 1827-70] gi|331645873|ref|ZP_08346976.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M605] gi|331656741|ref|ZP_08357703.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA206] gi|331662077|ref|ZP_08363000.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA143] gi|331667090|ref|ZP_08367955.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA271] gi|331676406|ref|ZP_08377103.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H591] gi|331682155|ref|ZP_08382777.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H299] gi|332282428|ref|ZP_08394841.1| succinate dehydrogenase iron-sulfur subunit [Shigella sp. D9] gi|12513639|gb|AAG55048.1|AE005250_7 succinate dehydrogenase, iron sulfur protein [Escherichia coli O157:H7 str. EDL933] gi|26107091|gb|AAN79275.1|AE016757_179 Succinate dehydrogenase iron-sulfur protein [Escherichia coli CFT073] gi|13360207|dbj|BAB34172.1| succinate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|24050816|gb|AAN42217.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 2a str. 301] gi|30040358|gb|AAP16090.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 2a str. 2457T] gi|73854725|gb|AAZ87432.1| succinate dehydrogenase, iron sulfur protein [Shigella sonnei Ss046] gi|81244562|gb|ABB65270.1| succinate dehydrogenase, iron sulfur protein [Shigella boydii Sb227] gi|91071332|gb|ABE06213.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli UTI89] gi|110342525|gb|ABG68762.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 536] gi|110614196|gb|ABF02863.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 5 str. 8401] gi|115512042|gb|ABJ00117.1| succinate dehydrogenase, FeS subunit [Escherichia coli APEC O1] gi|157065884|gb|ABV05139.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli HS] gi|157078243|gb|ABV17951.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E24377A] gi|169755859|gb|ACA78558.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli ATCC 8739] gi|170122190|gb|EDS91121.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia albertii TW07627] gi|170518805|gb|ACB16983.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli SMS-3-5] gi|187429890|gb|ACD09164.1| succinate dehydrogenase, iron-sulfur subunit [Shigella boydii CDC 3083-94] gi|187767237|gb|EDU31081.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4196] gi|188015206|gb|EDU53328.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4113] gi|188488428|gb|EDU63531.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 53638] gi|189002720|gb|EDU71706.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4076] gi|189355789|gb|EDU74208.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4401] gi|189363538|gb|EDU81957.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4486] gi|189365939|gb|EDU84355.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4501] gi|189373026|gb|EDU91442.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC869] gi|189376469|gb|EDU94885.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC508] gi|190902766|gb|EDV62496.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B7A] gi|190905678|gb|EDV65301.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli F11] gi|192926829|gb|EDV81455.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E22] gi|192956054|gb|EDV86520.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E110019] gi|194412893|gb|EDX29184.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B171] gi|194417752|gb|EDX33850.1| succinate dehydrogenase, iron-sulfur subunit [Shigella dysenteriae 1012] gi|194421835|gb|EDX37842.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli 101-1] gi|208727006|gb|EDZ76607.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4206] gi|208731544|gb|EDZ80232.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4045] gi|208737349|gb|EDZ85033.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4042] gi|209161450|gb|ACI38883.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. EC4115] gi|209776508|gb|ACI86566.1| succinate dehydrogenase [Escherichia coli] gi|209776510|gb|ACI86567.1| succinate dehydrogenase [Escherichia coli] gi|209776512|gb|ACI86568.1| succinate dehydrogenase [Escherichia coli] gi|209776514|gb|ACI86569.1| succinate dehydrogenase [Escherichia coli] gi|209776516|gb|ACI86570.1| succinate dehydrogenase [Escherichia coli] gi|209911234|dbj|BAG76308.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli SE11] gi|215263815|emb|CAS08152.1| succinate dehydrogenase, FeS subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320394|gb|EEC28818.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O157:H7 str. TW14588] gi|218350880|emb|CAU96578.1| succinate dehydrogenase, FeS subunit [Escherichia coli 55989] gi|218357252|emb|CAQ89887.1| succinate dehydrogenase, FeS subunit [Escherichia fergusonii ATCC 35469] gi|218360019|emb|CAQ97566.1| succinate dehydrogenase, FeS subunit [Escherichia coli IAI1] gi|218364409|emb|CAR02089.1| succinate dehydrogenase, FeS subunit [Escherichia coli S88] gi|218369065|emb|CAR16819.1| succinate dehydrogenase, FeS subunit [Escherichia coli IAI39] gi|218426082|emb|CAR06900.1| succinate dehydrogenase, FeS subunit [Escherichia coli ED1a] gi|222032461|emb|CAP75200.1| Succinate dehydrogenase iron-sulfur subunit [Escherichia coli LF82] gi|226898524|gb|EEH84783.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|227838395|gb|EEJ48861.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 83972] gi|254591270|gb|ACT70631.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str. TW14359] gi|257758078|dbj|BAI29575.1| succinate dehydrogenase, FeS subunit [Escherichia coli O103:H2 str. 12009] gi|257763211|dbj|BAI34706.1| succinate dehydrogenase, FeS subunit [Escherichia coli O111:H- str. 11128] gi|281177867|dbj|BAI54197.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli SE15] gi|281599961|gb|ADA72945.1| Succinate dehydrogenase, iron sulfur protein [Shigella flexneri 2002017] gi|290761529|gb|ADD55490.1| Succinate dehydrogenase, iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|291323812|gb|EFE63234.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli B088] gi|291469566|gb|EFF12050.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B354] gi|294489567|gb|ADE88323.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli IHE3034] gi|300301965|gb|EFJ58350.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 185-1] gi|300304536|gb|EFJ59056.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 200-1] gi|300398461|gb|EFJ81999.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 69-1] gi|300401202|gb|EFJ84740.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 84-1] gi|300407269|gb|EFJ90807.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 45-1] gi|300417826|gb|EFK01137.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 182-1] gi|300457184|gb|EFK20677.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 21-1] gi|300462581|gb|EFK26074.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 187-1] gi|300524529|gb|EFK45598.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 119-7] gi|300531062|gb|EFK52124.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 107-1] gi|300839522|gb|EFK67282.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 124-1] gi|300845559|gb|EFK73319.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 78-1] gi|305853630|gb|EFM54069.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli NC101] gi|306905709|gb|EFN36237.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli W] gi|307552576|gb|ADN45351.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli ABU 83972] gi|307627861|gb|ADN72165.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli UM146] gi|308118961|gb|EFO56223.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 145-7] gi|309700946|emb|CBJ00243.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli ETEC H10407] gi|310336562|gb|EFQ01729.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 1827-70] gi|312290245|gb|EFR18128.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 2362-75] gi|312945249|gb|ADR26076.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313649635|gb|EFS14059.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a str. 2457T] gi|315059967|gb|ADT74294.1| succinate dehydrogenase, FeS subunit [Escherichia coli W] gi|315257641|gb|EFU37609.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 85-1] gi|315287162|gb|EFU46574.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 110-3] gi|315292037|gb|EFU51389.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 153-1] gi|315299237|gb|EFU58491.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 16-3] gi|320177267|gb|EFW52273.1| Succinate dehydrogenase iron-sulfur protein [Shigella dysenteriae CDC 74-1112] gi|320179436|gb|EFW54393.1| Succinate dehydrogenase iron-sulfur protein [Shigella boydii ATCC 9905] gi|320182929|gb|EFW57798.1| Succinate dehydrogenase iron-sulfur protein [Shigella flexneri CDC 796-83] gi|320193118|gb|EFW67758.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. EC1212] gi|320194118|gb|EFW68750.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli WV_060327] gi|320198157|gb|EFW72761.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli EC4100B] gi|320637971|gb|EFX07740.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 str. G5101] gi|320643366|gb|EFX12546.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H- str. 493-89] gi|320648715|gb|EFX17348.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H- str. H 2687] gi|320654299|gb|EFX22352.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659932|gb|EFX27474.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O55:H7 str. USDA 5905] gi|323158774|gb|EFZ44787.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli E128010] gi|323163882|gb|EFZ49692.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei 53G] gi|323170843|gb|EFZ56493.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli LT-68] gi|323180038|gb|EFZ65594.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 1180] gi|323185117|gb|EFZ70483.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 1357] gi|323191069|gb|EFZ76334.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli RN587/1] gi|323379473|gb|ADX51741.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli KO11] gi|323938302|gb|EGB34559.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E1520] gi|323947011|gb|EGB43025.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H120] gi|323952717|gb|EGB48585.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H252] gi|323958468|gb|EGB54174.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H263] gi|323963105|gb|EGB58675.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H489] gi|323967431|gb|EGB62851.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli M863] gi|323976305|gb|EGB71395.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli TW10509] gi|324006248|gb|EGB75467.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 57-2] gi|324010445|gb|EGB79664.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 60-1] gi|324020369|gb|EGB89588.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 117-3] gi|324114834|gb|EGC08802.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia fergusonii B253] gi|324116265|gb|EGC10186.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E1167] gi|326341538|gb|EGD65328.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. 1044] gi|326345756|gb|EGD69495.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. 1125] gi|327254403|gb|EGE66025.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli STEC_7v] gi|330910473|gb|EGH38983.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli AA86] gi|331044625|gb|EGI16752.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M605] gi|331054989|gb|EGI26998.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA206] gi|331060499|gb|EGI32463.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA143] gi|331065446|gb|EGI37339.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli TA271] gi|331075899|gb|EGI47196.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H591] gi|331080579|gb|EGI51755.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H299] gi|332093784|gb|EGI98838.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii 5216-82] gi|332096488|gb|EGJ01484.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae 155-74] gi|332097693|gb|EGJ02668.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii 3594-74] gi|332104780|gb|EGJ08126.1| succinate dehydrogenase iron-sulfur subunit [Shigella sp. D9] gi|332342059|gb|AEE55393.1| succinate dehydrogenase, iron-sulfur subunit SdhB [Escherichia coli UMNK88] gi|332760911|gb|EGJ91199.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 4343-70] gi|332761307|gb|EGJ91593.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2747-71] gi|332763958|gb|EGJ94196.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri K-671] gi|332768179|gb|EGJ98364.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri 2930-71] gi|333007367|gb|EGK26847.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri VA-6] gi|333007768|gb|EGK27244.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri K-218] gi|333010161|gb|EGK29596.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri K-272] gi|333021115|gb|EGK40372.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri K-227] gi|333021574|gb|EGK40824.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri K-304] Length = 238 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|146307527|ref|YP_001187992.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas mendocina ymp] gi|145575728|gb|ABP85260.1| succinate dehydrogenase subunit B [Pseudomonas mendocina ymp] Length = 235 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + +D MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEKDAAPFMQDFQIDTGGKDIMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + G + + PLP + VI+DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNINGKNGLACITPLSAAGLKGGKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVQPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 QNDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 ADSRDTKTAERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 232 >gi|330445468|ref|ZP_08309120.1| succinate dehydrogenase iron-sulfur protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489659|dbj|GAA03617.1| succinate dehydrogenase iron-sulfur protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 237 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 157/234 (67%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +++ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NFSIYRYNPDVDNAPHMKGYTLEVPEGSDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + I + PLP + VI+DL++DM FYS + ++P+L Sbjct: 64 GINMNGKNGLACITPLSALTGSSTIVIRPLPGLPVIRDLIIDMEQFYSNYAKVKPFLIDD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQ+ EDR +DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GAVPPARENLQAPEDRAHLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLSNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 237 >gi|261341311|ref|ZP_05969169.1| succinate dehydrogenase, iron-sulfur protein [Enterobacter cancerogenus ATCC 35316] gi|288316615|gb|EFC55553.1| succinate dehydrogenase, iron-sulfur protein [Enterobacter cancerogenus ATCC 35316] Length = 238 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y +D ++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPRMQDYTLDAEDGRDMMLLDALMQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDNRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|16128699|ref|NP_415252.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107582|ref|AP_001362.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12 substr. W3110] gi|170080391|ref|YP_001729711.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12 substr. DH10B] gi|218704041|ref|YP_002411560.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli UMN026] gi|238899989|ref|YP_002925785.1| succinate dehydrogenase, FeS subunit [Escherichia coli BW2952] gi|256023674|ref|ZP_05437539.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp. 4_1_40B] gi|293403968|ref|ZP_06647962.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli FVEC1412] gi|298379744|ref|ZP_06989349.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli FVEC1302] gi|300900719|ref|ZP_07118868.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 198-1] gi|300947197|ref|ZP_07161407.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 116-1] gi|300957670|ref|ZP_07169860.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 175-1] gi|301027096|ref|ZP_07190468.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 196-1] gi|301648027|ref|ZP_07247794.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 146-1] gi|307137335|ref|ZP_07496691.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H736] gi|331641225|ref|ZP_08342360.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H736] gi|118615|sp|P07014|DHSB_ECOLI RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|28948819|pdb|1NEK|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound gi|28948823|pdb|1NEN|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With Dinitrophenol-17 Inhibitor Co-Crystallized At The Ubiquinone Binding Site gi|85544085|pdb|2ACZ|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone Binding Site gi|256599501|pdb|2WDQ|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599505|pdb|2WDQ|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599509|pdb|2WDQ|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599513|pdb|2WDV|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|256599517|pdb|2WDV|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|256599521|pdb|2WDV|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|259045634|pdb|2WDR|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|259045638|pdb|2WDR|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|259045642|pdb|2WDR|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|304445613|pdb|2WS3|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445617|pdb|2WS3|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445621|pdb|2WS3|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445629|pdb|2WU2|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant gi|304445633|pdb|2WU2|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant gi|304445637|pdb|2WU2|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant gi|304445641|pdb|2WU5|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|304445645|pdb|2WU5|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|304445649|pdb|2WU5|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|42928|emb|CAA25534.1| unnamed protein product [Escherichia coli] gi|146200|gb|AAA23896.1| succinate dehydrogenase small subunit [Escherichia coli K-12] gi|1651320|dbj|BAA35391.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K12 substr. W3110] gi|1786943|gb|AAC73818.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12 substr. MG1655] gi|169888226|gb|ACB01933.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12 substr. DH10B] gi|218431138|emb|CAR12014.1| succinate dehydrogenase, FeS subunit [Escherichia coli UMN026] gi|238863586|gb|ACR65584.1| succinate dehydrogenase, FeS subunit [Escherichia coli BW2952] gi|260450122|gb|ACX40544.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli DH1] gi|284920502|emb|CBG33564.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 042] gi|291428554|gb|EFF01579.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli FVEC1412] gi|298279442|gb|EFI20950.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli FVEC1302] gi|299879430|gb|EFI87641.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 196-1] gi|300315615|gb|EFJ65399.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 175-1] gi|300355778|gb|EFJ71648.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 198-1] gi|300453183|gb|EFK16803.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 116-1] gi|301073853|gb|EFK88659.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 146-1] gi|315135380|dbj|BAJ42539.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli DH1] gi|315614598|gb|EFU95240.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3431] gi|323942946|gb|EGB39110.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E482] gi|323972009|gb|EGB67229.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli TA007] gi|331038023|gb|EGI10243.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H736] Length = 238 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ D M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|84393479|ref|ZP_00992235.1| succinate dehydrogenase [Vibrio splendidus 12B01] gi|84375907|gb|EAP92798.1| succinate dehydrogenase [Vibrio splendidus 12B01] Length = 237 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 115/234 (49%), Positives = 162/234 (69%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DPT++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKEYTLEVEEGSDMMLLDALILLKEQDPTISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALTGQDKIVIRPLPGLPVVRDLIVDMTQFYDNYEKVKPFLVSD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GNVPPARENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 SRDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 237 >gi|254509032|ref|ZP_05121137.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus 16] gi|219548067|gb|EED25087.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus 16] Length = 236 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DP+++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKDYTLEVEEGSDMMLLDALILLKEQDPSISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKADKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLMDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ+ ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQTPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|86147662|ref|ZP_01065971.1| succinate dehydrogenase [Vibrio sp. MED222] gi|85834573|gb|EAQ52722.1| succinate dehydrogenase [Vibrio sp. MED222] Length = 237 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 115/234 (49%), Positives = 162/234 (69%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DPT++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDQKPYMKEYTLEVEEGSDMMLLDALILLKEQDPTISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALSGQDKIVIRPLPGLPVVRDLIVDMTQFYDNYEKVKPFLVSD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GNVPPARENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 SRDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 237 >gi|84999578|ref|XP_954510.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein [Theileria annulata] gi|65305508|emb|CAI73833.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein, putative [Theileria annulata] Length = 277 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 139/249 (55%), Positives = 185/249 (74%), Gaps = 5/249 (2%) Query: 15 GKIWNA-PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G I+ + P + ++R+ P++K P + TY VD ++CGPM+LD L+ IKN++D T Sbjct: 7 GVIFKSIPVLSPKNVNFSVFRYTPNSKEKPRIQTYTVDTNDCGPMILDALIKIKNEMDST 66 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSH 131 LT RRSCREGICGSC MNI+G N LAC+ D++ KG + + PLP M V+KDLV D+++ Sbjct: 67 LTFRRSCREGICGSCAMNINGENGLACLMDIEKHASKGTVEIQPLPGMYVLKDLVPDLTN 126 Query: 132 FYSQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 FY Q+RS+EPWLK +PK KE QS EDRQK+DGLYEC++CACCSTSCPSYWWN + Y Sbjct: 127 FYEQYRSVEPWLKRKTPKEGDKEYYQSKEDRQKLDGLYECILCACCSTSCPSYWWNPEHY 186 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA L+QAYRW+ DSRDE+ ERL + D +LYRCH I+NCT+ CPKGL+PA +I+K+ Sbjct: 187 LGPAALMQAYRWIADSRDEYTTERLVEVNDTMKLYRCHGILNCTKVCPKGLDPAGSISKL 246 Query: 251 KMMLLDRKI 259 K L++ + Sbjct: 247 KK-LVEENV 254 >gi|317047344|ref|YP_004114992.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pantoea sp. At-9b] gi|316948961|gb|ADU68436.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pantoea sp. At-9b] Length = 238 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 159/234 (67%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NP+ P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPEVDDAPRMQEYSLEAEDGRDMMLLDALIKLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS DR+ +DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGENPPAREHLQSPADREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLHRG 237 >gi|312884957|ref|ZP_07744647.1| succinate dehydrogenase iron-sulfur subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309367434|gb|EFP94996.1| succinate dehydrogenase iron-sulfur subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 236 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 115/233 (49%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DPT+ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDTDKKPYMKDYTLEVEEGSDMMVLDALILLKEQDPTIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++D++VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALGSKKIVIRPLPGLPVVRDMIVDMTQFYDNYAKVKPFLIDDD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS EDR +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPEDRAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|238898943|ref|YP_002924625.1| succinate dehydrogenase, Fe-S protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466703|gb|ACQ68477.1| succinate dehydrogenase, Fe-S protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 238 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 159/234 (67%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y + + M+L L + DPTLT RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDKPRMQDYSLPFEEGRDMMLLDALIALKEKDPTLTFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GMN++G N LAC+ + + + PLP + V++DLVVDM+ FY+Q+ I+P+L Sbjct: 64 GMNMNGKNGLACITPLSSLIKANQKMVIRPLPGLPVVRDLVVDMAQFYAQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E+R K+DGLYEC++CACCST+CPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPEERAKLDGLYECILCACCSTACPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RL+ L+D F ++RCH IMNC CPKGLNP +AI IK MLL+R Sbjct: 184 DSRDTQTQTRLEGLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLERG 237 >gi|225023990|ref|ZP_03713182.1| hypothetical protein EIKCOROL_00857 [Eikenella corrodens ATCC 23834] gi|224943015|gb|EEG24224.1| hypothetical protein EIKCOROL_00857 [Eikenella corrodens ATCC 23834] Length = 235 Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 169/235 (71%), Gaps = 2/235 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 ++YR+NPD P M Y ++++ +LD ++ +K K D +L+ RRSCREGIC Sbjct: 2 ETIRLKVYRYNPDTDAKPYMQDYELEIEPTDVKLLDAIMKLKAK-DDSLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ +K I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDGMNINGKNGLACLTDIRSLKQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P +E LQS +R ++DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR++ Sbjct: 121 DNPVDPQQERLQSQAERAELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+RD ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 181 DTRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 235 >gi|52840775|ref|YP_094574.1| succinate dehydrogenase iron-sulfur subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627886|gb|AAU26627.1| succinate dehydrogenase iron-sulfur protein subunit B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 240 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 163/237 (68%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLD-NCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + IYR+NP+ P M Y +++ PM+L L +K + DP++T RRSCR Sbjct: 2 ADSRNLILSIYRYNPEVDAKPYMKDYEIEIPAKSDPMLLTLLERLKAEQDPSITYRRSCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EG+CGS GMNI+GTN LAC+ + I + PLP VI+DL VDM+ FY Q+ IE Sbjct: 62 EGVCGSDGMNINGTNGLACITHISQLKTDKIVIRPLPGFPVIRDLAVDMTQFYQQYERIE 121 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L+ PA+E LQS E+R ++DGLYEC++CACC++SCPSYWWN D+++GPA LLQA Sbjct: 122 PYLQNDEVAPARERLQSPEERAQLDGLYECILCACCTSSCPSYWWNPDKFVGPAGLLQAR 181 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+L DSRD+ RLD L+DPF ++RC TIMNCT CPKGLNP +AIAKI+ +L + Sbjct: 182 RFLADSRDKATQHRLDLLQDPFSVFRCRTIMNCTNVCPKGLNPTQAIAKIRTQMLTQ 238 >gi|254429648|ref|ZP_05043355.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alcanivorax sp. DG881] gi|196195817|gb|EDX90776.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alcanivorax sp. DG881] Length = 238 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 126/238 (52%), Positives = 165/238 (69%), Gaps = 8/238 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NP+ P M Y VD MVLD L +K + D +++ RRSCREG+CGS Sbjct: 2 KVSIYRYNPETDREPSMKEYEVDTQGKDLMVLDILALVK-EQDESMSYRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAI-------AVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GMN++G N LAC+ + + + + PLP + VI+DLVVDM FY+Q+ ++P Sbjct: 61 GMNMNGKNGLACITPLSQVAPGVLEGKKPLILRPLPGLPVIRDLVVDMGMFYNQYEKVQP 120 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L+ SP PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQ+YR Sbjct: 121 YLQNSSPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQSYR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L DSRD ERL L+DPF L+RCH IMNC CPKGLNP +AI I+ MLL+R I Sbjct: 181 FLADSRDTVTEERLSKLDDPFSLFRCHGIMNCVSVCPKGLNPTRAIGHIRSMLLERGI 238 >gi|110834358|ref|YP_693217.1| succinate dehydrogenase, iron-sulfur [Alcanivorax borkumensis SK2] gi|110647469|emb|CAL16945.1| succinate dehydrogenase, iron-sulfur [Alcanivorax borkumensis SK2] Length = 238 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 8/238 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NP+ P M Y VD MVLD L +K + D +++ RRSCREG+CGS Sbjct: 2 KVSIYRYNPETDREPSMKEYEVDTQGKDLMVLDILALVK-EQDESMSYRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAI-------AVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GMN++G N LAC+ + + + + PLP + VI+DLVVDM FYSQ+ ++P Sbjct: 61 GMNMNGKNGLACITPLSQVAPGVLEGKKPLILRPLPGLPVIRDLVVDMGMFYSQYEKVQP 120 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L+ SP PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQ+YR Sbjct: 121 YLQNSSPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQSYR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L DSRD ERL L+DPF L+RCH IMNC CPKGLNP +AI I+ MLL+R I Sbjct: 181 FLADSRDTVTEERLSKLDDPFSLFRCHGIMNCVSVCPKGLNPTRAIGHIRSMLLERGI 238 >gi|325498101|gb|EGC95960.1| succinate dehydrogenase iron-sulfur subunit [Escherichia fergusonii ECD227] Length = 238 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+KIDGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKIDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|37679215|ref|NP_933824.1| succinate dehydrogenase iron-sulfur subunit [Vibrio vulnificus YJ016] gi|37197958|dbj|BAC93795.1| succinate dehydrogenase, iron-sulfur protein [Vibrio vulnificus YJ016] Length = 252 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 116/246 (47%), Positives = 163/246 (66%), Gaps = 2/246 (0%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 K + G + +YR+NPD P M Y +++++ M++ L + + D T++ Sbjct: 7 KYVHTKGGLNMKLNFSVYRYNPDVDTKPYMKDYVLEVEDGSDMMVLDALILLKEQDATIS 66 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 RRSCREG+CGS G+N++G N LAC+ I + PLP + VI+DL+VDM+ FY Sbjct: 67 FRRSCREGVCGSDGLNMNGKNGLACITPLSALKADKIVIRPLPGLPVIRDLIVDMTQFYD 126 Query: 135 QHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++P+L + P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GP Sbjct: 127 NYAKVKPFLISDGALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGP 186 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A LL AYRWLIDSRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK M Sbjct: 187 AGLLAAYRWLIDSRDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSM 246 Query: 254 LLDRKI 259 L++R + Sbjct: 247 LVNRSV 252 >gi|308050198|ref|YP_003913764.1| succinate dehydrogenase subunit B [Ferrimonas balearica DSM 9799] gi|307632388|gb|ADN76690.1| succinate dehydrogenase subunit B [Ferrimonas balearica DSM 9799] Length = 235 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 164/232 (70%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E +YR+NP++ P M Y +DL M++ +L + + DPTL+ RRSCREG+CGS Sbjct: 4 EVSVYRYNPESDARPKMQDYTLDLPEGSDMMVLDVLLLLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + K + V PLP M V++DLVVD+S FY Q+ ++P+L Sbjct: 64 GINMNGKNGLACITPISTFKGKKLTVRPLPGMPVVRDLVVDLSQFYKQYEKVKPYLINDG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 PA+E LQS E+R K+DGLYEC++CACCST+CPS+WWN D+++GP+ LL AYR+LIDSR Sbjct: 124 KTPARENLQSPEERAKLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLHAYRFLIDSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ERL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL+R + Sbjct: 184 DTATDERLADLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLNRAV 235 >gi|262190298|ref|ZP_06048566.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae CT 5369-93] gi|262033827|gb|EEY52299.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae CT 5369-93] Length = 236 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRAV 236 >gi|326794794|ref|YP_004312614.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marinomonas mediterranea MMB-1] gi|326545558|gb|ADZ90778.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marinomonas mediterranea MMB-1] Length = 234 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 119/231 (51%), Positives = 157/231 (67%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR+NP+ P M Y +DL +++ +L I DP ++ RRSCREG+CGS G Sbjct: 3 VSIYRYNPEVDDAPYMQDYNIDLPAGKDLMVLDVLNIIKAQDPAVSYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN+ G N LAC+ + + PLP + V++DLVVDM FY Q+ I+P+L + Sbjct: 63 MNMSGKNGLACITPVSEAVKNDKLVLRPLPGLPVVRDLVVDMGQFYKQYEKIKPFLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS EDR+K+DGLYEC++CACCST+CPS+WWN D+++GP+ LLQAYR+L DSR Sbjct: 123 PAPAIERLQSPEDREKLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D +RL +L+DPF ++RCH IMNC CPKGLNP KAI I+ MLL R Sbjct: 183 DTATQDRLSDLDDPFSVFRCHGIMNCVNVCPKGLNPTKAIGSIRSMLLQRA 233 >gi|332019814|gb|EGI60275.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Acromyrmex echinatior] Length = 329 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 129/235 (54%), Positives = 168/235 (71%), Gaps = 4/235 (1%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 L+ R+YRWNP+ P M + +DL+ CG M+LD L+ IK + DPTL+ RRSCREG Sbjct: 62 PRLQTVRVYRWNPETPEVKPYMQQFSIDLNKCGKMMLDILILIKAQHDPTLSFRRSCREG 121 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSCGMNI+G NTLAC+ +K+ + + +YPLPH VI+DL+ DMSHF Q R I+P L Sbjct: 122 ICGSCGMNINGVNTLACITQIKESQKPLVIYPLPHTYVIRDLIADMSHFLGQFRKIDPHL 181 Query: 144 KTVSPKPAKELLQSHE---DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 K + + Q + DR K+DGL+ECVMCACC+ SCP YWW D+YLGPA+L+QAY Sbjct: 182 KRPGEDDSLGMRQILQSPRDRNKLDGLFECVMCACCAFSCPPYWWLGDKYLGPAVLMQAY 241 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +W+IDSRD ERL L D + +YRCHTI NCT++CPKGLNP +AIA++K +L Sbjct: 242 KWVIDSRDMAHEERLGKLRDYYSVYRCHTIFNCTKTCPKGLNPGRAIAQLKRLLA 296 >gi|218710212|ref|YP_002417833.1| succinate dehydrogenase iron-sulfur subunit [Vibrio splendidus LGP32] gi|218323231|emb|CAV19408.1| succinate dehydrogenase [Vibrio splendidus LGP32] Length = 239 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 115/234 (49%), Positives = 162/234 (69%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M+L L + + DPT++ RRSCREG+CGS Sbjct: 6 NFSLYRYNPDVDQKPYMKEYTLEVEEGSDMMLLDALILLKEQDPTISFRRSCREGVCGSD 65 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + I + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 66 GLNMNGKNGLACITPLSALSGQDKIVIRPLPGLPVVRDLIVDMTQFYDNYEKVKPFLVSD 125 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLID Sbjct: 126 GNVPPARENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLID 185 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 186 SRDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 239 >gi|312602725|ref|YP_004022570.1| succinate dehydrogenase iron-sulfur protein [Burkholderia rhizoxinica HKI 454] gi|312170039|emb|CBW77051.1| Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) [Burkholderia rhizoxinica HKI 454] Length = 268 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 121/242 (50%), Positives = 170/242 (70%), Gaps = 1/242 (0%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + + ++R++PD P M Y ++ M+LD L +K +D TL R Sbjct: 28 FPERVAMTQRRIIDVFRYDPDRDERPRMQRYEIEPQPEDRMLLDVLGRLKA-LDETLAYR 86 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGS MNI+G N LAC+ +M+ + I + PLP + V++DL+VDM+ F++Q+ Sbjct: 87 RSCREGICGSDAMNINGVNGLACLTNMQSLPVHIQLRPLPGLPVVRDLIVDMTSFFNQYH 146 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 S++P+L +P P +E LQ+ ++R ++DGLYEC++CACCS++CPSYWWN D+++GPA LL Sbjct: 147 SVKPYLINETPPPERERLQTPQERDQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLL 206 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QAYR+++DSRDE GERLDNLEDP+RL+RC TIMNC CPKGLNPA AI I+ ML R Sbjct: 207 QAYRFIVDSRDEATGERLDNLEDPYRLFRCRTIMNCADVCPKGLNPAAAIGHIRSMLARR 266 Query: 258 KI 259 + Sbjct: 267 AL 268 >gi|255714899|ref|XP_002553731.1| KLTH0E05742p [Lachancea thermotolerans] gi|238935113|emb|CAR23294.1| KLTH0E05742p [Lachancea thermotolerans] Length = 263 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 144/235 (61%), Positives = 179/235 (76%), Gaps = 3/235 (1%) Query: 24 EKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E LK ++IYRWNPD+ P + + VDL+ CGPMVLD LL IK++ D TLTLRRSCRE Sbjct: 27 EPRLKTFKIYRWNPDHPADKPKLQEFKVDLNKCGPMVLDALLKIKDEQDATLTLRRSCRE 86 Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI G NTLAC K D+ +YPLPHM ++KDLV D++ FY Q++S++P Sbjct: 87 GICGSCAMNIGGRNTLACLCKIDTDVSKQTKIYPLPHMYIVKDLVPDLTQFYKQYKSVQP 146 Query: 142 WLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +L+ P+ KE LQS EDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAY Sbjct: 147 YLQRSKMPEDGKENLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAY 206 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RWLIDSRDE R + L++ LYRCHTIMNCT++CPKGLNP AIA+IK L Sbjct: 207 RWLIDSRDEASKFRKEMLQNSMSLYRCHTIMNCTRTCPKGLNPGYAIAEIKKALA 261 >gi|209694424|ref|YP_002262352.1| succinate dehydrogenase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] gi|208008375|emb|CAQ78530.1| succinate dehydrogenase iron-sulfur protein [Aliivibrio salmonicida LFI1238] Length = 237 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 117/234 (50%), Positives = 164/234 (70%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y ++++ M++ L + + DPT++ RRSCREG+CGS Sbjct: 4 NFSIYRYNPDVDNAPHMKAYTLEVEEGSDMMVLDALILLKEQDPTISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + + KG + + PLP + V++DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSELIGKGDLVIRPLPGLPVVRDLIVDMAQFYENYEKVKPFLISD 123 Query: 147 S-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P++E LQS E+R+ +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GATPPSRENLQSPEEREHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK MLL + + Sbjct: 184 SRDTATNERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLLKKAV 237 >gi|161522800|ref|YP_001585729.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|189348356|ref|YP_001941552.1| succinate dehydrogenase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|160346353|gb|ABX19437.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia multivorans ATCC 17616] gi|189338494|dbj|BAG47562.1| succinate dehydrogenase iron-sulfur protein [Burkholderia multivorans ATCC 17616] Length = 235 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 174/233 (74%), Gaps = 1/233 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + + I+R++P+ P M Y + + + M+LD L+ +K + D TL+ RRSCREG+ Sbjct: 2 SDTRTFEIFRYDPERDSRPYMQKYEIVVADDDRMLLDVLVRLKAR-DETLSFRRSCREGV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS MNI+ N LAC+ ++ D+ + PLP + V++DL+VDM+ F+ Q+ SI+P+L Sbjct: 61 CGSDAMNINRKNGLACITNLNDLPRHTVLRPLPGLPVVRDLIVDMTAFFKQYHSIKPYLV 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P +E QSHE+R ++DGLYEC++CACCS++CPSYWWN D+Y+GPA LLQAYR+L+ Sbjct: 121 NDTPPPERERRQSHEERDQLDGLYECILCACCSSACPSYWWNPDKYVGPAGLLQAYRFLV 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRDE GERLDNL+DP+RL+RC TI+NCT CPKGLNPA+AIA+I+ ML R Sbjct: 181 DSRDEGTGERLDNLDDPYRLFRCRTILNCTDVCPKGLNPARAIAEIRTMLARR 233 >gi|291616727|ref|YP_003519469.1| SdhB [Pantoea ananatis LMG 20103] gi|291151757|gb|ADD76341.1| SdhB [Pantoea ananatis LMG 20103] gi|327393153|dbj|BAK10575.1| succinate dehydrogenase iron- sulfur protein SdhB [Pantoea ananatis AJ13355] Length = 238 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDKPRMQDYTLEAEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPFLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS +R+ +DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGENPPAREHLQSPGEREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|254786523|ref|YP_003073952.1| succinate dehydrogenase iron-sulfur subunit [Teredinibacter turnerae T7901] gi|237686404|gb|ACR13668.1| succinate dehydrogenase / fumarate reductase family protein, iron-sulfur subunit [Teredinibacter turnerae T7901] Length = 234 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 128/234 (54%), Positives = 164/234 (70%), Gaps = 3/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M TY VD + MVLD L +K D +L+ RRSCREG+CG Sbjct: 1 MLKVEVYRYNPETDKEPYMQTYEVDTEGKDLMVLDVLELLKA-QDASLSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI G N LACV + + + + PLP + VI+DLV+DMS FY+Q R ++P+L+ Sbjct: 60 SDGMNISGKNGLACVTPLSECTKNNKLILRPLPGLPVIRDLVIDMSQFYAQFRKVDPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P PA E LQS EDR+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L Sbjct: 120 NDQPAPAIERLQSQEDREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ERL NL+DPF ++RCH I NC CPKGLNP +AI I+ MLL R Sbjct: 180 DSRDTATNERLANLDDPFSVFRCHGIQNCVDVCPKGLNPTRAIGHIRSMLLHRA 233 >gi|253990449|ref|YP_003041805.1| succinate dehydrogenase iron-sulfur subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638984|emb|CAR67599.1| succinate dehydrogenase iron-sulfur protein (ec 1.3.99.1) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781899|emb|CAQ85063.1| succinate dehydrogenase iron-sulfur protein [Photorhabdus asymbiotica] Length = 238 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 123/232 (53%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + + + I + PLP + VI+DLVVDM FY+Q+ I P+L Sbjct: 64 GLNMNGKNGLACITPVSALRRGRKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIRPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREHLQSPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLDNL D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETDSRLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLK 235 >gi|241253049|ref|XP_002403788.1| succinate dehydrogenase, putative [Ixodes scapularis] gi|215496562|gb|EEC06202.1| succinate dehydrogenase, putative [Ixodes scapularis] Length = 286 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 142/235 (60%), Positives = 179/235 (76%), Gaps = 7/235 (2%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 G K +K++ IYRWNP+ P + TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCR Sbjct: 41 GNKGVKKFEIYRWNPEKKGDKPRLQTYEVDLNACGPMVLDALIKIKNEVDPTLTFRRSCR 100 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG NTLAC+ + + + +YPLPHM V+KDLV Q++SI+P Sbjct: 101 EGICGSCAMNIDGRNTLACICKIDNPGQSTKIYPLPHMYVVKDLVPVSG----QYKSIQP 156 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL+ + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWNSDRYLGPA L+Q Sbjct: 157 WLQKKTEVKLGEQQHLQSIEDRKKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALMQV 216 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+IDSRD+ ERL LEDPF +YRCHTIMNCT++CPK LNP +AI ++K ++ Sbjct: 217 YRWVIDSRDDNTQERLKRLEDPFSMYRCHTIMNCTKTCPKSLNPGRAIGELKKLV 271 >gi|300918383|ref|ZP_07134983.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 115-1] gi|300414446|gb|EFJ97756.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS 115-1] Length = 238 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NEQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|92113342|ref|YP_573270.1| succinate dehydrogenase iron-sulfur subunit [Chromohalobacter salexigens DSM 3043] gi|91796432|gb|ABE58571.1| succinate dehydrogenase subunit B [Chromohalobacter salexigens DSM 3043] Length = 236 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 122/229 (53%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NP+ P M + +D MVL+ L IK D ++ RRSCREG+CGS Sbjct: 5 QVSIYRYNPETDSAPYMQEFQLDTQGRDIMVLNALEMIKQ-QDSSMAYRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 GMN++G N LAC+ + ++ + PLP + VI+DLVVDM FY Q+ SI+P+L+ Sbjct: 64 GMNMNGKNGLACITPLSEVVKDNKLVLRPLPGLPVIRDLVVDMGVFYKQYESIQPYLQND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + PA E LQS E+R K+DGLYEC++CACCST+CPS+WWN D+++GPA LLQAYR+L DS Sbjct: 124 TNPPATERLQSPEERDKLDGLYECILCACCSTACPSFWWNPDKFVGPAGLLQAYRFLADS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RD ERL LEDPF L+RC IMNC CPKGLNP +AI KI+ MLL Sbjct: 184 RDTATSERLARLEDPFSLFRCRGIMNCVAVCPKGLNPTRAIGKIREMLL 232 >gi|50551431|ref|XP_503189.1| YALI0D23397p [Yarrowia lipolytica] gi|49649057|emb|CAG81389.1| YALI0D23397p [Yarrowia lipolytica] Length = 268 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 143/238 (60%), Positives = 172/238 (72%), Gaps = 3/238 (1%) Query: 21 PTGEKNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 +K++ IYRWNPD P + Y VDL CGPMVLD L+ IKN+ DPTLT RRS Sbjct: 29 KVPAPRIKKFGIYRWNPDTPEKKPELKEYEVDLSQCGPMVLDALIKIKNEQDPTLTFRRS 88 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNI+G NTLAC + DI +YPLPHM V++DLV D++ FY Q++S Sbjct: 89 CREGICGSCAMNIEGRNTLACLCRINPDIAKEEKIYPLPHMFVVRDLVPDLTQFYKQYKS 148 Query: 139 IEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 IEP+L+ P KE LQS DR+K+DGLYEC++CACCSTSCPSYWWN YLGPA+L+ Sbjct: 149 IEPYLQRDEVPADGKENLQSIADRRKLDGLYECILCACCSTSCPSYWWNQQEYLGPAVLM 208 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QAYRW+IDSRDE +R LE+ LYRCHTIMNC ++CPKGLNP AIAKIK + Sbjct: 209 QAYRWMIDSRDEATAKRQQMLENSMSLYRCHTIMNCARTCPKGLNPGLAIAKIKRSMA 266 >gi|82775992|ref|YP_402339.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae Sd197] gi|293414001|ref|ZP_06656650.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B185] gi|331651722|ref|ZP_08352741.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M718] gi|81240140|gb|ABB60850.1| succinate dehydrogenase, iron sulfur protein [Shigella dysenteriae Sd197] gi|291434059|gb|EFF07032.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B185] gi|331050000|gb|EGI22058.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M718] Length = 238 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ D M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NEQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|157146669|ref|YP_001453988.1| succinate dehydrogenase iron-sulfur subunit [Citrobacter koseri ATCC BAA-895] gi|157083874|gb|ABV13552.1| hypothetical protein CKO_02435 [Citrobacter koseri ATCC BAA-895] Length = 238 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 120/233 (51%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEGEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALHQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL++L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEDLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|319997168|gb|ADV91178.1| mitochondrial succinate dehydrogenase iron-sulphur subunit-like protein 1 [Karlodinium micrum] Length = 289 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 129/236 (54%), Positives = 171/236 (72%), Gaps = 2/236 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++++ IYR++P+ P M Y +DL GPM+LD L+ +K+++DPTLT RRSCR Sbjct: 26 AAATQMQKFAIYRYDPEKSARPFMQEYDIDLKATGPMILDALIKVKDEVDPTLTFRRSCR 85 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNI+G N LAC+ ++ I + PLPH V+KDLV D+++FY+Q++SIEP Sbjct: 86 EGICGSCAMNINGKNGLACLIYIEPDAKPIEIQPLPHSYVVKDLVPDLTNFYNQYKSIEP 145 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WLK K KE QSHEDR K+DG+YEC++CA C TSCPSYWWN + YLGPA+L+QA Sbjct: 146 WLKRKEEKQAGEKEYYQSHEDRLKLDGMYECILCASCMTSCPSYWWNPEYYLGPAVLMQA 205 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YRW+ DSRD++ ERL + D +LYRCH IMNCT CPKGL+PAKAI ++K + Sbjct: 206 YRWIADSRDQYTEERLAWVNDTMKLYRCHGIMNCTNCCPKGLDPAKAIVELKAQVA 261 >gi|153835351|ref|ZP_01988018.1| succinate dehydrogenase iron-sulfur protein [Vibrio harveyi HY01] gi|148868142|gb|EDL67301.1| succinate dehydrogenase iron-sulfur protein [Vibrio harveyi HY01] Length = 236 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP+++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDTKPYMKDYTLEVEEGSDMMVLDALILLKEQDPSISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALQGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R I Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSI 236 >gi|331004888|ref|ZP_08328305.1| Succinate dehydrogenase iron-sulfur protein [gamma proteobacterium IMCC1989] gi|330421342|gb|EGG95591.1| Succinate dehydrogenase iron-sulfur protein [gamma proteobacterium IMCC1989] Length = 232 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 121/231 (52%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + ++ + MVLD L +K D L RRSCREG+CG Sbjct: 1 MLKVEVYRYNPETDQAPHMQMFEIETNGRDYMVLDILELLKANQDNGLVFRRSCREGVCG 60 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + + PLP + VI+DLV+DMS FY+Q+R IEP+L+ Sbjct: 61 SDGMNINGKNGLACITPLSECVKNDTLVLRPLPGLPVIRDLVIDMSQFYAQYRKIEPFLQ 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQ+YR+L Sbjct: 121 NDEPVQGIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQSYRFLA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRD +RLDNL DPF ++RCH I NC CPKGLNP KAI I+ MLL Sbjct: 181 DSRDNATDKRLDNLRDPFSVFRCHGIQNCVSVCPKGLNPTKAIGHIRSMLL 231 >gi|226330949|ref|ZP_03806467.1| hypothetical protein PROPEN_04872 [Proteus penneri ATCC 35198] gi|225201744|gb|EEG84098.1| hypothetical protein PROPEN_04872 [Proteus penneri ATCC 35198] Length = 238 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLEVPEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + ++ I + PLP + VI+DL+VDM+ FY+Q+ I P+L Sbjct: 64 GVNMNGKNGLACITPISSLQKGSKKIVIRPLPGLPVIRDLIVDMTQFYTQYEKIRPYLIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLY+C++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPARENLQSPEQREKLDGLYDCILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETESRLDDLNDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLKR 236 >gi|28897620|ref|NP_797225.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|153838591|ref|ZP_01991258.1| succinate dehydrogenase iron-sulfur protein [Vibrio parahaemolyticus AQ3810] gi|260365985|ref|ZP_05778470.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|260878225|ref|ZP_05890580.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|260895662|ref|ZP_05904158.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|260901290|ref|ZP_05909685.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|28805832|dbj|BAC59109.1| succinate dehydrogenase, iron-sulfur protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748009|gb|EDM58868.1| succinate dehydrogenase iron-sulfur protein [Vibrio parahaemolyticus AQ3810] gi|308088171|gb|EFO37866.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|308090144|gb|EFO39839.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|308109829|gb|EFO47369.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|308111280|gb|EFO48820.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|328473396|gb|EGF44244.1| succinate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus 10329] Length = 236 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDTKPYMKEYTLEVDEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALQGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 236 >gi|71064682|ref|YP_263409.1| succinate dehydrogenase iron-sulfur subunit [Psychrobacter arcticus 273-4] gi|71037667|gb|AAZ17975.1| succinate dehydrogenase subunit B [Psychrobacter arcticus 273-4] Length = 236 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 161/232 (69%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M TY V+L + M+LD LL +K + D TLT RRSCREGICG Sbjct: 5 TRTIEIYRYDPDLDAAPRMQTYTVELLDSDRMLLDVLLRLKKE-DETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S GMNI+G N LAC+ +M + + V PLP + V++DLVVDM+ FY Q+ + P+L Sbjct: 64 SDGMNINGKNGLACLINMNTLPEKVTVRPLPGLPVVRDLVVDMNQFYEQYEKVHPFLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P PA E LQS E R+K++GLYEC++CACCSTSCPS+WWN D++LGP+ LL A R++ DS Sbjct: 124 QPAPATERLQSPEQREKLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLHADRFVSDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD RL L+DPF L+RC IMNC CPKGLNP KAI ++ +LLD+ Sbjct: 184 RDSDTRARLARLDDPFSLFRCRGIMNCVSVCPKGLNPTKAIGHLRNLLLDQA 235 >gi|90411598|ref|ZP_01219608.1| succinate dehydrogenase [Photobacterium profundum 3TCK] gi|90327488|gb|EAS43841.1| succinate dehydrogenase [Photobacterium profundum 3TCK] Length = 237 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 158/234 (67%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +D+ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NFSIYRYNPDIDNAPHMKGYTLDVPEGSDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++GTN LAC+ + I + PLP + VI+DL++DM FY+ + ++P+L Sbjct: 64 GVNMNGTNGLACITPLSALVNDKTIVIRPLPGLPVIRDLIIDMEQFYANYAKVKPYLIDD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS EDR +DGLY+C+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GAIPPARENLQSPEDRAHLDGLYDCIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLSDLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 237 >gi|66045248|ref|YP_235089.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. syringae B728a] gi|237803492|ref|ZP_04591077.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|289679944|ref|ZP_06500834.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. syringae FF5] gi|63255955|gb|AAY37051.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Pseudomonas syringae pv. syringae B728a] gi|330899184|gb|EGH30603.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. japonica str. M301072PT] gi|330973468|gb|EGH73534.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. aceris str. M302273PT] gi|330980730|gb|EGH78833.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331025474|gb|EGI05530.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 234 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQNGV 234 >gi|253996133|ref|YP_003048197.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylotenera mobilis JLW8] gi|253982812|gb|ACT47670.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylotenera mobilis JLW8] Length = 245 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 120/230 (52%), Positives = 167/230 (72%), Gaps = 1/230 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR+NPD P M Y ++L + M+LD L+ IK D TL++R+SCREG+CGS Sbjct: 2 KFSIYRYNPDTDKKPYMQDYDIELQDEDQMLLDALIRIKQH-DETLSMRKSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LACV + D++ + + P+P + VI+DLVVDM+ F+ + S++P+L P Sbjct: 61 AMNINGKNGLACVTKLSDLEQPVVLRPMPGLPVIRDLVVDMTQFFEHYNSVKPYLINDDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS EDR K+DGLYEC+MC C+T+CPS+WWN D+++GP+ L+QAYR+++DSRD Sbjct: 121 LPETERLQSPEDRAKLDGLYECIMCGACTTACPSFWWNPDKFVGPSGLMQAYRFIVDSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + ERL+NLEDP+RLYRCH IMNC CPK LNP AIA IK + ++R Sbjct: 181 QAEAERLENLEDPYRLYRCHNIMNCVDVCPKKLNPNAAIANIKDLKIERA 230 >gi|292487652|ref|YP_003530525.1| succinate dehydrogenase, iron sulfur protein [Erwinia amylovora CFBP1430] gi|292898889|ref|YP_003538258.1| succinate dehydrogenase iron-sulfur protein [Erwinia amylovora ATCC 49946] gi|291198737|emb|CBJ45846.1| succinate dehydrogenase iron-sulfur protein [Erwinia amylovora ATCC 49946] gi|291553072|emb|CBA20117.1| succinate dehydrogenase, iron sulfur protein [Erwinia amylovora CFBP1430] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTLT RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLESEDGRDMMLLDALMRLKEKDPTLTFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ + R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQKPPAREHLQQPQQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|237730688|ref|ZP_04561169.1| succinate dehydrogenase iron-sulfur subunit [Citrobacter sp. 30_2] gi|226906227|gb|EEH92145.1| succinate dehydrogenase iron-sulfur subunit [Citrobacter sp. 30_2] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLKR 236 >gi|329295935|ref|ZP_08253271.1| succinate dehydrogenase iron-sulfur subunit [Plautia stali symbiont] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 120/234 (51%), Positives = 159/234 (67%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NP+ P M Y ++ ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPEVDDKPRMQDYTLEAEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+NI+G N LAC+ + + I + PLP + VI+DLVVDM F++Q++ I+P+L Sbjct: 64 GLNINGKNGLACITPVSALGNGSKKIVIRPLPGLPVIRDLVVDMGQFHAQYKKIKPFLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ+ R+ +DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGENPPAREHLQTPAQREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|330959057|gb|EGH59317.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 234 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + KG + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKGKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQNGV 234 >gi|156973651|ref|YP_001444558.1| succinate dehydrogenase iron-sulfur subunit [Vibrio harveyi ATCC BAA-1116] gi|156525245|gb|ABU70331.1| hypothetical protein VIBHAR_01354 [Vibrio harveyi ATCC BAA-1116] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 113/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP+++ RRSCREG+CGS Sbjct: 6 NFSLYRYNPDVDTKPYMKDYTLEVEEGSDMMVLDALILLKEQDPSISFRRSCREGVCGSD 65 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 66 GLNMNGKNGLACITPLSALQGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 125 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 126 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 185 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R I Sbjct: 186 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSI 238 >gi|27363641|ref|NP_759169.1| succinate dehydrogenase iron-sulfur subunit [Vibrio vulnificus CMCP6] gi|320157042|ref|YP_004189421.1| succinate dehydrogenase iron-sulfur protein [Vibrio vulnificus MO6-24/O] gi|27359757|gb|AAO08696.1| Succinate dehydrogenase iron-sulfur protein [Vibrio vulnificus CMCP6] gi|319932354|gb|ADV87218.1| succinate dehydrogenase iron-sulfur protein [Vibrio vulnificus MO6-24/O] Length = 236 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 160/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++++ M++ L + + D T++ RRSCREG+CGS Sbjct: 4 NFSVYRYNPDVDTKPYMKDYVLEVEDGSDMMVLDALILLKEQDATISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + VI+DL+VDM+ FY + ++P+L + Sbjct: 64 GLNMNGKNGLACITPLSALKADKIVIRPLPGLPVIRDLIVDMTQFYDNYAKVKPFLISDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSV 236 >gi|15642088|ref|NP_231720.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586938|ref|ZP_01676718.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 2740-80] gi|121727387|ref|ZP_01680526.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae V52] gi|147674178|ref|YP_001217613.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae O395] gi|153213694|ref|ZP_01948946.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 1587] gi|153801975|ref|ZP_01956561.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae MZO-3] gi|153818395|ref|ZP_01971062.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae NCTC 8457] gi|153821666|ref|ZP_01974333.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae B33] gi|153826067|ref|ZP_01978734.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae MZO-2] gi|153828929|ref|ZP_01981596.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 623-39] gi|227082214|ref|YP_002810765.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae M66-2] gi|229507823|ref|ZP_04397328.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae BX 330286] gi|229511940|ref|ZP_04401419.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae B33] gi|229513743|ref|ZP_04403205.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TMA 21] gi|229519076|ref|ZP_04408519.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC9] gi|229522045|ref|ZP_04411462.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TM 11079-80] gi|229524094|ref|ZP_04413499.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae bv. albensis VL426] gi|229607368|ref|YP_002878016.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254286795|ref|ZP_04961748.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae AM-19226] gi|254849174|ref|ZP_05238524.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae MO10] gi|255745169|ref|ZP_05419118.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholera CIRS 101] gi|262155973|ref|ZP_06029094.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae INDRE 91/1] gi|262167707|ref|ZP_06035410.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC27] gi|297579592|ref|ZP_06941520.1| succinate dehydrogenase [Vibrio cholerae RC385] gi|298497886|ref|ZP_07007693.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae MAK 757] gi|9656637|gb|AAF95234.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548874|gb|EAX58917.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 2740-80] gi|121630279|gb|EAX62677.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae V52] gi|124115755|gb|EAY34575.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 1587] gi|124122489|gb|EAY41232.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae MZO-3] gi|126511085|gb|EAZ73679.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae NCTC 8457] gi|126520764|gb|EAZ77987.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae B33] gi|146316061|gb|ABQ20600.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae O395] gi|148875635|gb|EDL73770.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae 623-39] gi|149740184|gb|EDM54337.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae MZO-2] gi|150423086|gb|EDN15034.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae AM-19226] gi|227010102|gb|ACP06314.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae M66-2] gi|227013985|gb|ACP10195.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae O395] gi|229337675|gb|EEO02692.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae bv. albensis VL426] gi|229340970|gb|EEO05975.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TM 11079-80] gi|229343765|gb|EEO08740.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC9] gi|229348924|gb|EEO13881.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TMA 21] gi|229351905|gb|EEO16846.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae B33] gi|229355328|gb|EEO20249.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae BX 330286] gi|229370023|gb|ACQ60446.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae MJ-1236] gi|254844879|gb|EET23293.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae MO10] gi|255736999|gb|EET92395.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholera CIRS 101] gi|262023912|gb|EEY42610.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC27] gi|262030284|gb|EEY48927.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae INDRE 91/1] gi|297537186|gb|EFH76019.1| succinate dehydrogenase [Vibrio cholerae RC385] gi|297542219|gb|EFH78269.1| succinate dehydrogenase iron-sulfur subunit [Vibrio cholerae MAK 757] gi|327484620|gb|AEA79027.1| Succinate dehydrogenase iron-sulfur protein [Vibrio cholerae LMA3894-4] Length = 236 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 236 >gi|283784480|ref|YP_003364345.1| succinate dehydrogenase iron-sulfur protein [Citrobacter rodentium ICC168] gi|282947934|emb|CBG87498.1| succinate dehydrogenase iron-sulfur protein [Citrobacter rodentium ICC168] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKG---AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQLGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ+ E R+K+DGLYEC++CACCSTSCPS+WW+ D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQTPEQREKLDGLYECILCACCSTSCPSFWWSPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|195400701|ref|XP_002058954.1| GJ15311 [Drosophila virilis] gi|194141606|gb|EDW58023.1| GJ15311 [Drosophila virilis] Length = 382 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 138/244 (56%), Positives = 172/244 (70%), Gaps = 6/244 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 E+ +K + IYRW P P M Y +DL+ CG MVLD L+ IK+++D TLT RR Sbjct: 124 KPKPKEERMKTFEIYRWKP--GDEPKMQKYKLDLNKCGAMVLDALIKIKSEMDATLTFRR 181 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNIDG NTLAC ++ +YPLPH+ V +DLV DMS FY Q+R Sbjct: 182 SCREGICGSCAMNIDGINTLACIQAIDTNVGRPCKIYPLPHLYVKRDLVPDMSQFYDQYR 241 Query: 138 SIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 SIEPWL+ + LQS EDR ++DGLYEC++CACC T+CPSYWWNS++YLGPA Sbjct: 242 SIEPWLQRKDLNREMGKAQYLQSLEDRNRLDGLYECILCACCQTACPSYWWNSEKYLGPA 301 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRDE RL L DP++LYRCHTI+NCT +CPK LNPA AI ++K +L Sbjct: 302 VLMQAYRWVIDSRDEATEHRLCQLMDPWKLYRCHTILNCTNTCPKNLNPAMAIMELKQLL 361 Query: 255 LDRK 258 K Sbjct: 362 AGMK 365 >gi|260853959|ref|YP_003227850.1| succinate dehydrogenase, FeS subunit [Escherichia coli O26:H11 str. 11368] gi|257752608|dbj|BAI24110.1| succinate dehydrogenase, FeS subunit [Escherichia coli O26:H11 str. 11368] gi|323153763|gb|EFZ40010.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli EPECa14] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYDKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|300722385|ref|YP_003711671.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus nematophila ATCC 19061] gi|297628888|emb|CBJ89471.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus nematophila ATCC 19061] Length = 238 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 122/232 (52%), Positives = 154/232 (66%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDVPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LACV + + I + PLP + V++DLVVDM FY+Q+ I P+L Sbjct: 64 GVNMNGKNGLACVTPISALRRGNKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIRPYLLN 123 Query: 146 VSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNSPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLDNL D F ++RCH IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETASRLDNLNDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLK 235 >gi|329120250|ref|ZP_08248918.1| succinate dehydrogenase iron-sulfur subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327462591|gb|EGF08914.1| succinate dehydrogenase iron-sulfur subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 235 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 170/235 (72%), Gaps = 2/235 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +YR+NPD P M Y ++++ +LD ++ +K D TL+ RRSCREGIC Sbjct: 2 EKIRLSVYRYNPDVDAKPYMKDYELEIEPSDVKLLDAIMKLKA-QDDTLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ +K I + PLP + V++DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDGMNINGKNGLACLTDIRSLKQPIVLRPLPGLPVVRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P KE LQ+ E+R+++DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR++ Sbjct: 121 DTPVDPNKERLQTQEERKELDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLNAYRFIA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERLDNL DP+RL+RCHTIMNC +CPK LNP +AI KIK ++L R + Sbjct: 181 DSRDTITNERLDNLNDPYRLFRCHTIMNCVDACPKHLNPTRAIGKIKEIMLKRAV 235 >gi|229528896|ref|ZP_04418286.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae 12129(1)] gi|229332670|gb|EEN98156.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae 12129(1)] Length = 236 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 159/233 (68%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N+LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNSLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 236 >gi|156086096|ref|XP_001610457.1| succinate dehydrogenase iron-sulfur subunit [Babesia bovis T2Bo] gi|154797710|gb|EDO06889.1| succinate dehydrogenase iron-sulfur subunit, putative [Babesia bovis] Length = 281 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 175/235 (74%), Gaps = 4/235 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 N + ++R++P++ P M +Y VD CGPM+LD L+ IKN+ D TL+ RRSCREG Sbjct: 17 SANGVTFSVFRYSPESGKRPRMQSYKVDTAACGPMILDALIKIKNEQDSTLSFRRSCREG 76 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG---AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 ICGSC MN++G N LAC++ ++ ++ + PLP M V++DLV DM++FY Q+R+++ Sbjct: 77 ICGSCAMNVNGENCLACLRSIESCTNQGNSVEIQPLPGMYVLRDLVADMTNFYEQYRTVQ 136 Query: 141 PWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 PWLK +PK E LQS EDR +DG+YEC++CACC+TSCPSYWWN + Y+GPA L+QA Sbjct: 137 PWLKRKTPKSGEAEFLQSREDRALLDGMYECILCACCTTSCPSYWWNPEHYIGPAALMQA 196 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRW+ DSRDE+ ER+ ++ D +LYRCH I+NCT++CPKGL+PAKAI+K+K + Sbjct: 197 YRWIEDSRDEYTVERMVDVNDSMKLYRCHGILNCTRACPKGLDPAKAISKLKAKV 251 >gi|302187421|ref|ZP_07264094.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. syringae 642] gi|330940367|gb|EGH43472.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. pisi str. 1704B] gi|330951682|gb|EGH51942.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae Cit 7] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQNGV 234 >gi|156103075|ref|XP_001617230.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium vivax SaI-1] gi|148806104|gb|EDL47503.1| iron-sulfur subunit of succinate dehydrogenase, putative [Plasmodium vivax] Length = 340 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 141/254 (55%), Positives = 189/254 (74%), Gaps = 4/254 (1%) Query: 8 KRSRVKRGKIWNAPTGEKN-LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI 66 K VK+ + ++N LK++ I+R+NP N P M+T+ VD+DNCGPMVLD L+ I Sbjct: 66 KNESVKKKSDHAENSAQQNELKKFSIFRYNPQNNKRPKMETFEVDIDNCGPMVLDVLIKI 125 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDL 125 K++ID TL+ RRSCREGICGSC MNI+G N LAC+ ++ K + ++PLP++ +IKDL Sbjct: 126 KDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEVTEIHPLPNLYIIKDL 185 Query: 126 VVDMSHFYSQHRSIEPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 V D+++FY+Q++SI+PW KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSY Sbjct: 186 VPDLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSY 245 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 WWN + YLGPA L+QAYRW++DSRDE+ ERL + D +LYRCH IMNCT CPKGL+P Sbjct: 246 WWNPEYYLGPATLMQAYRWIVDSRDEYTKERLMEVNDTMKLYRCHGIMNCTLCCPKGLDP 305 Query: 244 AKAIAKIKMMLLDR 257 AKAI +K ++ ++ Sbjct: 306 AKAIRNMKELVQEK 319 >gi|289646684|ref|ZP_06478027.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. 2250] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNRLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ EDR+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEDREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV 234 >gi|90406986|ref|ZP_01215176.1| succinate dehydrogenase [Psychromonas sp. CNPT3] gi|90311857|gb|EAS39952.1| succinate dehydrogenase [Psychromonas sp. CNPT3] Length = 237 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 162/235 (68%), Gaps = 3/235 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ IYR+NPD P M ++++ M++ L + + D +L+ RRSCREG+CGS Sbjct: 3 VKFSIYRYNPDIDNAPYMQDLSLEVEPGNDMMVLDALILLKEADASLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+NI+G N LAC+ + D G I + PLP + VI+DLV+DM+ FY+Q+ ++P+L + Sbjct: 63 DGLNINGKNALACITPLSDLLNAGKIVIRPLPGLPVIRDLVIDMTQFYTQYEKVKPYLIS 122 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA E QS E R+++DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 123 DGALPPAGEFKQSPEQRKELDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD RL +L+D F ++RCH IMNC CPKGLNP KAI KIK MLL R I Sbjct: 183 DSRDTATESRLADLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGKIKSMLLQRAI 237 >gi|85711264|ref|ZP_01042323.1| succinate dehydrogenase [Idiomarina baltica OS145] gi|85694765|gb|EAQ32704.1| succinate dehydrogenase [Idiomarina baltica OS145] Length = 237 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 124/236 (52%), Positives = 163/236 (69%), Gaps = 2/236 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 IYR+NPD P M Y ++++ +++ LL + DP+L RRSCREG+C Sbjct: 2 KTVNISIYRYNPDVDDAPYMKDYSLEIEENQDLMVLDLLIKLKEKDPSLAFRRSCREGVC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GS G+N++G N LAC+ M +KG I + PLP + VI+DL+VDMS FY Q+ I+P+L Sbjct: 62 GSDGLNMNGKNGLACITPMSSLKGGKIVIRPLPGLPVIRDLIVDMSQFYKQYEKIKPYLI 121 Query: 145 TVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 122 NDEKTPPARERLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 IDSRD +RLD+L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 182 IDSRDTATEQRLDDLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLSRAV 237 >gi|300176488|emb|CBK24153.2| unnamed protein product [Blastocystis hominis] Length = 277 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 132/233 (56%), Positives = 169/233 (72%), Gaps = 3/233 (1%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + K + ++R+ P+ P M+ Y VD+ +CG MVLD L IKN+IDPT + RRSCREGI Sbjct: 41 PSYKLFDVFRYTPNKDRKPHMERYAVDVSDCGTMVLDALFQIKNQIDPTFSFRRSCREGI 100 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNI+G N LAC+ + + V PLPHM VIKDL+ DM++FY Q+ SI+PWL+ Sbjct: 101 CGSCAMNINGENGLACLTKITPGSDTMTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQ 160 Query: 145 TV---SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 S E LQSHEDR +DGLYEC++CACCSTSCPSYWW+ D+YLGP+IL QAYR Sbjct: 161 KKSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQQAYR 220 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W+ DSRDE ERL +L+D ++LYRCH IMNCT +CPK LNP ++I K+K + Sbjct: 221 WIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKKAI 273 >gi|70729107|ref|YP_258843.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas fluorescens Pf-5] gi|68343406|gb|AAY91012.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas fluorescens Pf-5] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 161/235 (68%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P + VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLQVEVYRYNPDTDSAPKTQVFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVKKNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI I+ MLL + Sbjct: 180 DSRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLQSGV 234 >gi|28869400|ref|NP_792019.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213968185|ref|ZP_03396330.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas syringae pv. tomato T1] gi|301383810|ref|ZP_07232228.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. tomato Max13] gi|302059588|ref|ZP_07251129.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. tomato K40] gi|302133377|ref|ZP_07259367.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852641|gb|AAO55714.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927165|gb|EEB60715.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas syringae pv. tomato T1] gi|330875697|gb|EGH09846.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967011|gb|EGH67271.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. actinidiae str. M302091] gi|331018598|gb|EGH98654.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL I Sbjct: 180 DSRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGI 234 >gi|170722677|ref|YP_001750365.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas putida W619] gi|169760680|gb|ACA73996.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudomonas putida W619] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 161/232 (69%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M+++ VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLKVEVYRYNPDTDSAPKMESFDVDTGGKDLMVLDVLALIK-EKDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMN++G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNMNGKNGLACITPLSGVVKGNKLVLRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEDRDKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 DSRDTKTQERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 231 >gi|26990882|ref|NP_746307.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas putida KT2440] gi|148546902|ref|YP_001267004.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas putida F1] gi|167034756|ref|YP_001669987.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas putida GB-1] gi|24985895|gb|AAN69771.1|AE016613_6 succinate dehydrogenase, iron-sulfur protein [Pseudomonas putida KT2440] gi|148510960|gb|ABQ77820.1| succinate dehydrogenase subunit B [Pseudomonas putida F1] gi|166861244|gb|ABY99651.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudomonas putida GB-1] gi|313497964|gb|ADR59330.1| SdhB [Pseudomonas putida BIRD-1] Length = 234 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 125/232 (53%), Positives = 162/232 (69%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M+++ VD MVLD L IK K D + RRSCREG+CG Sbjct: 1 MLKVEVYRYNPDTDSAPKMESFDVDTGGKDLMVLDVLALIKEK-DEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMN++G N LAC+ + + + + PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNMNGKNGLACITPLSAVVKGGKLVLRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEDRDKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 DSRDTKTQERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 231 >gi|213053324|ref|ZP_03346202.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425384|ref|ZP_03358134.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213613269|ref|ZP_03371095.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213851937|ref|ZP_03381469.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824378|ref|ZP_06543971.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 238 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|71032191|ref|XP_765737.1| succinate dehydrogenase iron-sulfur subunit [Theileria parva strain Muguga] gi|68352694|gb|EAN33454.1| succinate dehydrogenase iron-sulfur subunit, putative [Theileria parva] Length = 263 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 137/253 (54%), Positives = 181/253 (71%), Gaps = 9/253 (3%) Query: 15 GKIWNA-PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G I+ P + ++R+ P++K P M TY VD + CGPM+LD L+ IKN++D T Sbjct: 7 GVIFKTLPVLSPKNVNFSVFRYTPNSKEKPRMQTYTVDTNECGPMILDALIKIKNEMDST 66 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSH 131 LT RRSCREGICGSC MNI+G N LAC+ D++ + + PLP M V+KDLV D+++ Sbjct: 67 LTFRRSCREGICGSCAMNINGENGLACLMDIEKQASMGTVEIQPLPGMYVLKDLVPDLTN 126 Query: 132 FYSQHRSIEPWLKTVSP-----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 FY Q+RS+EPWLK +P + KE QS EDRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 127 FYEQYRSVEPWLKRKTPKVLSEEGDKEYYQSREDRQKLDGLYECILCACCSTSCPSYWWN 186 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + YLGPA L+QAYRW+ DSRDE+ ERL + D +LYRCH I+NCT+ CPKGL+PA + Sbjct: 187 PEHYLGPAALMQAYRWIADSRDEYTTERLVEVNDTMKLYRCHGILNCTKVCPKGLDPAGS 246 Query: 247 IAKIKMMLLDRKI 259 I+K+K L++ + Sbjct: 247 ISKLKK-LVEENV 258 >gi|54308240|ref|YP_129260.1| succinate dehydrogenase iron-sulfur subunit [Photobacterium profundum SS9] gi|46912668|emb|CAG19458.1| Putative succinate dehydrogenase, iron-sulfur protein [Photobacterium profundum SS9] Length = 237 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 157/234 (67%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +D+ M++ L + + DPTL RRSCREG+CGS Sbjct: 4 NFSIYRYNPDIDNAPHMKGYTLDVPEGSDMMVLDALILLKEQDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++GTN LAC+ + I + PLP + VI+DL++DM FY + ++P+L Sbjct: 64 GVNMNGTNGLACITPLSALITDKTIVIRPLPGLPVIRDLIIDMEQFYVNYAKVKPYLIDD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS EDR +DGLY+C+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GALPPARENLQSPEDRAHLDGLYDCIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLSDLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 237 >gi|317491185|ref|ZP_07949621.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920732|gb|EFV42055.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 238 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 161/234 (68%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ +YR+NPD P M Y ++ + M+L L + + DPTL RRSCREG+CGS Sbjct: 3 VEFSVYRYNPDVDNAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKG---AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+N++G N LAC+ + ++ I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPVSTLQRAGKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLL 122 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL +YR+L Sbjct: 123 NDGKNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLASYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RLD+L+D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 183 IDSRDTETDSRLDDLDDAFSVFRCHSIMNCVNVCPKGLNPTRAIGHIKSMLLHR 236 >gi|71733365|ref|YP_274203.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485475|ref|ZP_05639516.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71553918|gb|AAZ33129.1| succinate dehydrogenase, iron-sulfur protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324895|gb|EFW80967.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320329261|gb|EFW85258.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330880842|gb|EGH14991.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330888153|gb|EGH20814.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. mori str. 301020] gi|330987440|gb|EGH85543.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010657|gb|EGH90713.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 234 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV 234 >gi|308458708|ref|XP_003091688.1| CRE-SDHB-1 protein [Caenorhabditis remanei] gi|308255374|gb|EFO99326.1| CRE-SDHB-1 protein [Caenorhabditis remanei] Length = 288 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 178/240 (74%), Gaps = 4/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +K + IYR+NP+ G P + + VDLD CG M+LD L+ IKN++DPTLT R Sbjct: 30 PQKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFR 89 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K D + +YPLPHM V+KDLV DM+ FY+Q+ Sbjct: 90 RSCREGICGSCAMNIGGQNTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQY 149 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 SI+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 150 ASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPA 209 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK LNPAKAI +IK +L Sbjct: 210 VLMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLL 269 >gi|238911665|ref|ZP_04655502.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|21362473|sp|Q8ZQU2|DHSB_SALTY RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|312911761|dbj|BAJ35735.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322615832|gb|EFY12750.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621228|gb|EFY18085.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623648|gb|EFY20486.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628920|gb|EFY25700.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634900|gb|EFY31630.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636572|gb|EFY33276.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641781|gb|EFY38414.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647813|gb|EFY44293.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651857|gb|EFY48226.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652646|gb|EFY48995.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658454|gb|EFY54717.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664943|gb|EFY61134.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668387|gb|EFY64543.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670525|gb|EFY66658.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675265|gb|EFY71341.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679691|gb|EFY75732.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323193151|gb|EFZ78370.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200602|gb|EFZ85677.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202274|gb|EFZ87322.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205459|gb|EFZ90425.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213502|gb|EFZ98295.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215336|gb|EGA00081.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221789|gb|EGA06196.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228081|gb|EGA12217.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231013|gb|EGA15129.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234154|gb|EGA18243.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238151|gb|EGA22209.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243586|gb|EGA27604.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247390|gb|EGA31349.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251378|gb|EGA35250.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258483|gb|EGA42155.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323264709|gb|EGA48211.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270973|gb|EGA54408.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 238 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|2446983|dbj|BAA22505.1| iron-sulfur protein subunit [Pleurotus ostreatus] gi|2446985|dbj|BAA22506.1| iron-sulfur protein subunit [Pleurotus ostreatus] gi|2446987|dbj|BAA22507.1| iron-sulfur protein subunit [Pleurotus ostreatus] gi|2723414|dbj|BAA24089.1| iron-sulfur protein subunit [Pleurotus ostreatus] gi|221665278|gb|ACM24773.1| iron-sulfur protein subunit [Pleurotus ostreatus] Length = 268 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 133/232 (57%), Positives = 176/232 (75%), Gaps = 3/232 (1%) Query: 28 KEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y +DL+ GPM+LD L+ IKN+IDPTLT RRSCREGICG Sbjct: 38 KEFKIYRWNPDEPAKKPHLQSYTIDLNQTGPMILDALIKIKNEIDPTLTFRRSCREGICG 97 Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDG NTLAC + ++ +YPLPHM ++KDLV D++ FY Q++SI+P+L+ Sbjct: 98 SCAMNIDGQNTLACLCRIDRNASKDSKIYPLPHMYIVKDLVPDLTLFYKQYKSIKPYLQN 157 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + LQS EDR+K+DG+YEC++CACCSTSCPSYWWN D YLGPA L+ AYRW+ D Sbjct: 158 DNVPEREH-LQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAALMAAYRWIAD 216 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 SRD + +R ++ ++ L+RCHTI NC+++CPKGLNPAKAIA+IK+ L Sbjct: 217 SRDTYGAQRKEHFQNELSLFRCHTIFNCSRTCPKGLNPAKAIAEIKLALATE 268 >gi|283833990|ref|ZP_06353731.1| succinate dehydrogenase, iron-sulfur protein [Citrobacter youngae ATCC 29220] gi|291070124|gb|EFE08233.1| succinate dehydrogenase, iron-sulfur protein [Citrobacter youngae ATCC 29220] Length = 238 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I P+L Sbjct: 64 GLNMNGKNGLACITPVSALNQPGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKITPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLKR 236 >gi|89573825|gb|ABD77138.1| succinate dehydrogenase complex subunit B [Oryctolagus cuniculus] Length = 247 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 141/226 (62%), Positives = 174/226 (76%), Gaps = 4/226 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 22 TAAATAPRIKKFAIYRWDPDKAGDKPRMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFR 81 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 142 KSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKG Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKG 247 >gi|93004941|ref|YP_579378.1| succinate dehydrogenase iron-sulfur subunit [Psychrobacter cryohalolentis K5] gi|92392619|gb|ABE73894.1| succinate dehydrogenase subunit B [Psychrobacter cryohalolentis K5] Length = 236 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 123/232 (53%), Positives = 160/232 (68%), Gaps = 1/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD P M TY ++L + M+LD LL +K + D TLT RRSCREGICG Sbjct: 5 TRTIEIYRYDPDLDAAPRMQTYTIELLDSDRMLLDVLLRLKKE-DETLTFRRSCREGICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S GMNI+G N LAC+ +M + + V PLP + V++DLVVDM+ FY Q+ + P+L Sbjct: 64 SDGMNINGKNGLACLINMNTLPEKVTVRPLPGLPVVRDLVVDMNQFYEQYEKVHPFLIND 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P PA E LQS E R K++GLYEC++CACCSTSCPS+WWN D++LGP+ LL A R++ DS Sbjct: 124 QPAPATERLQSPEQRDKLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLHADRFVSDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD RL L+DPF L+RC IMNC CPKGLNP KAI ++ +LLD+ Sbjct: 184 RDSDTRARLARLDDPFSLFRCRGIMNCVSVCPKGLNPTKAIGHLRNLLLDQA 235 >gi|325275373|ref|ZP_08141319.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas sp. TJI-51] gi|324099490|gb|EGB97390.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas sp. TJI-51] Length = 234 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 124/232 (53%), Positives = 162/232 (69%), Gaps = 3/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NPD P M+++ VD MVLD L IK + D + RRSCREG+CG Sbjct: 1 MLKVEVYRYNPDTDSAPKMESFDVDTGGKDLMVLDVLALIK-EKDEGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMN++G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNMNGKNGLACITPLSAVVKGNKLVLRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQS EDR+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 DSRDTKTQERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 231 >gi|254498642|ref|ZP_05111360.1| succinate dehydrogenase iron-sulfur subunit [Legionella drancourtii LLAP12] gi|254352090|gb|EET10907.1| succinate dehydrogenase iron-sulfur subunit [Legionella drancourtii LLAP12] Length = 240 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 161/237 (67%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLD-NCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + IYR+NP+ P M Y + + PM+L L +K + DP++T RRSCR Sbjct: 2 ADNRNLTLSIYRYNPEVDAKPYMKDYVLAIPAKSDPMLLTLLERLKAEQDPSITYRRSCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EG+CGS GMNI+GTN LAC+ + I V PLP VI+DL VDMS FY Q+ IE Sbjct: 62 EGVCGSDGMNINGTNGLACITHVSELKTDKIVVRPLPGFPVIRDLAVDMSQFYQQYERIE 121 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L+ PA+E LQS E+R ++DGLYEC++CACC++SCPS+WWN ++++GPA LLQA Sbjct: 122 PYLQNDQNAPAQERLQSPEERAQLDGLYECILCACCTSSCPSFWWNPEKFVGPAGLLQAR 181 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+L DSRD RLD L+DPF ++RC TIMNCT CPKGLNP KAIA+I+ +L + Sbjct: 182 RFLADSRDTATDHRLDKLQDPFSVFRCRTIMNCTNVCPKGLNPTKAIAEIRTQMLRQ 238 >gi|152996813|ref|YP_001341648.1| succinate dehydrogenase iron-sulfur subunit [Marinomonas sp. MWYL1] gi|150837737|gb|ABR71713.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marinomonas sp. MWYL1] Length = 234 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 119/231 (51%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR+NP+ P M Y ++L +++ +L + DP+++ RRSCREG+CGS G Sbjct: 3 VSIYRYNPEKDDAPYMQDYEIELPAGKDLMVLDVLNLLKAQDPSISYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN+ G N LAC+ KG + + PLP + V++DLVVDM FY Q+ I P+L + Sbjct: 63 MNMSGKNGLACITPVSEAVKKGKLVLRPLPGLPVVRDLVVDMGQFYKQYEKIRPYLLNDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS E+R+K+DGLYEC++CACCST+CPS+WWN D+++GP+ LLQAYR+L DSR Sbjct: 123 PAPAIERLQSPEEREKLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL +L+DPF ++RCH IMNC CPKGLNP KAI I+ MLL R Sbjct: 183 DTATQERLSDLDDPFSVFRCHGIMNCVNVCPKGLNPTKAIGNIRTMLLQRA 233 >gi|320664756|gb|EFX31894.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O157:H7 str. LSU-61] Length = 238 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDCRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|289624402|ref|ZP_06457356.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867444|gb|EGH02153.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 234 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNRLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV 234 >gi|161504115|ref|YP_001571227.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865462|gb|ABX22085.1| hypothetical protein SARI_02213 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 239 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALHHPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 237 >gi|312171760|emb|CBX80018.1| succinate dehydrogenase, iron sulfur protein [Erwinia amylovora ATCC BAA-2158] Length = 238 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 160/234 (68%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ ++ M+L L + DPTLT RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLESEDGRDMMLLDALMRLKEKDPTLTFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQKPPAREHLQQPLQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|89573827|gb|ABD77139.1| succinate dehydrogenase complex subunit B [Tadarida brasiliensis] Length = 225 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 144/221 (65%), Positives = 177/221 (80%), Gaps = 4/221 (1%) Query: 34 RWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNI 92 RW+PD P M TY +DL+ CGPMVLD L+ IKN++D TLT RRSCREGICGSC MNI Sbjct: 5 RWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNI 64 Query: 93 DGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--K 149 +G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK + Sbjct: 65 NGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQE 124 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+ Sbjct: 125 GKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDD 184 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 F ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+I Sbjct: 185 FTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEI 225 >gi|18073243|emb|CAC80855.1| DHSB protein [Dendronephthya klunzingeri] Length = 282 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 139/236 (58%), Positives = 175/236 (74%), Gaps = 4/236 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K K + IYRW+P+ P M Y VDLD+CGPMVLD L+ IKN+IDPTLT RRSCREG Sbjct: 35 KRTKTFSIYRWDPEKAGDKPRMQDYEVDLDSCGPMVLDALIKIKNEIDPTLTFRRSCREG 94 Query: 84 ICGSCGMNIDGTNTLACVKDMK-DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC+ + +YPLPHM VIKDLV DM+HFY Q+RSI+P+ Sbjct: 95 ICGSCAMNIGGKNTLACICRIDGASNKKEKIYPLPHMYVIKDLVPDMTHFYDQYRSIKPY 154 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L ++LLQ+ EDR K+DGLYEC++CACC+TSCPSYWW+ ++YLGPA+L+QAY Sbjct: 155 LMRKDDMVAGKEQLLQTQEDRAKLDGLYECILCACCTTSCPSYWWHGEKYLGPAVLMQAY 214 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RW+IDSRD +Q ERL L++ +Y CHTIMNCT +CPKGLNP +A+ K + ++ Sbjct: 215 RWMIDSRDHYQNERLAMLDNHHSVYPCHTIMNCTMTCPKGLNPGEAVGKSRQPVMR 270 >gi|294671248|ref|ZP_06736101.1| hypothetical protein NEIELOOT_02958 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307076|gb|EFE48319.1| hypothetical protein NEIELOOT_02958 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 235 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 170/235 (72%), Gaps = 2/235 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 ++YR+NPD P M Y ++++ +LD ++ +K D +L+ RRSCREGIC Sbjct: 2 EKIRLQVYRYNPDVDAKPYMKDYELEIEPTDVKLLDAIIKLKA-QDDSLSFRRSCREGIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS GMNI+G N LAC+ D++ + I + PLP + VI+DL+VDM+ F+ Q+ SI+P++ Sbjct: 61 GSDGMNINGKNGLACLVDIRSLAQPIVLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN 120 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P P KE LQS E+R+++DGLYEC++CACCSTSCPS+WWN D+++GP+ LL AYR++ Sbjct: 121 DTPVDPRKERLQSQEERKELDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLNAYRFIA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERLDNL DP+RL+RCHTIMNC +CPK LNP +AI KIK ++L R + Sbjct: 181 DSRDTITNERLDNLNDPYRLFRCHTIMNCVDACPKHLNPTRAIGKIKEIMLKRAV 235 >gi|89573823|gb|ABD77137.1| succinate dehydrogenase complex subunit B [Lepus europaeus] Length = 246 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 140/226 (61%), Positives = 174/226 (76%), Gaps = 4/226 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 21 TAAATAPRIKKFAIYRWDPDKAGDKPRMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 80 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 81 RSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQY 140 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK ++ LQS E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 141 KSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 200 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPKG Sbjct: 201 VLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKG 246 >gi|17533915|ref|NP_495992.1| Succinate DeHydrogenase complex subunit B family member (sdhb-1) [Caenorhabditis elegans] gi|1706423|sp|Q09545|DHSB_CAEEL RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|3876930|emb|CAA87780.1| C. elegans protein F42A8.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 298 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 178/240 (74%), Gaps = 4/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +K + IYR+NP+ G P + + VDLD CG M+LD L+ IKN++DPTLT R Sbjct: 45 KTKKTGNRIKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFR 104 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K D + +YPLPHM V+KDLV DM+ FY+Q+ Sbjct: 105 RSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQY 164 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 SI+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 165 ASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPA 224 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK LNPAKAI +IK +L Sbjct: 225 VLMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLL 284 >gi|16759674|ref|NP_455291.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142553|ref|NP_805895.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25284637|pir||AC0591 succinate dehydrogenase iron-sulfur protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501967|emb|CAD05197.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138184|gb|AAO69755.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 239 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 237 >gi|16764105|ref|NP_459720.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179309|ref|YP_215726.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615039|ref|YP_001589004.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194443626|ref|YP_002039972.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451818|ref|YP_002044765.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472849|ref|ZP_03078833.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735281|ref|YP_002113841.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195874277|ref|ZP_02701546.2| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197249240|ref|YP_002145693.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197301125|ref|ZP_02663936.2| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198245175|ref|YP_002214703.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390202|ref|ZP_03216813.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929954|ref|ZP_03220975.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351999|ref|YP_002225800.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205357899|ref|ZP_02574106.2| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358366|ref|ZP_02655671.2| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205358921|ref|ZP_02665518.2| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205360772|ref|ZP_02686311.2| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|207856179|ref|YP_002242830.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582550|ref|YP_002636348.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16419245|gb|AAL19679.1| succinate dehydrogenase, Fe-S protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126942|gb|AAX64645.1| succinate dehydrogenase, Fe-S protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364403|gb|ABX68171.1| hypothetical protein SPAB_02799 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402289|gb|ACF62511.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410122|gb|ACF70341.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459213|gb|EDX48052.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710783|gb|ACF90004.1| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629192|gb|EDX48560.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212943|gb|ACH50340.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288368|gb|EDY27749.1| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939691|gb|ACH77024.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602647|gb|EDZ01193.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320948|gb|EDZ06149.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271780|emb|CAR36614.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205328869|gb|EDZ15633.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334657|gb|EDZ21421.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340265|gb|EDZ27029.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347185|gb|EDZ33816.1| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707982|emb|CAR32271.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467077|gb|ACN44907.1| succinate dehydrogenase catalytic subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245998|emb|CBG23800.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992473|gb|ACY87358.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157326|emb|CBW16815.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321226310|gb|EFX51361.1| Succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322684833|gb|EFY80832.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713778|gb|EFZ05349.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129045|gb|ADX16475.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323260637|gb|EGA44246.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|326622459|gb|EGE28804.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627039|gb|EGE33382.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987672|gb|AEF06655.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 239 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 237 >gi|194769556|ref|XP_001966870.1| GF19050 [Drosophila ananassae] gi|190618391|gb|EDV33915.1| GF19050 [Drosophila ananassae] Length = 444 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 139/237 (58%), Positives = 175/237 (73%), Gaps = 6/237 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K + IYRW P P TY +DL+ CG MVLD L+ IK +DPTLT RRSCREGIC Sbjct: 193 RMKTFEIYRWKP--GDQPQTQTYELDLEKCGAMVLDALIKIKTDLDPTLTFRRSCREGIC 250 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC MNI+GTNTLAC+ + + +YPLPH+ VI+DLV D++ FY Q+RSI+PWL+ Sbjct: 251 GSCAMNINGTNTLACLAPIDQNESRCCRIYPLPHLYVIRDLVPDLTQFYDQYRSIQPWLQ 310 Query: 145 TVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + K + LQS EDR +DGLYEC++CACC TSCPSYWWNSD+YLGPA+L+QAYR Sbjct: 311 RKNMKHEAGTAQYLQSVEDRAVLDGLYECILCACCQTSCPSYWWNSDKYLGPAVLMQAYR 370 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSRDE +RL L+DP++LYRCHTIMNCT +CPK LNPA+AI +K + + K Sbjct: 371 WVIDSRDEATEQRLGFLKDPWKLYRCHTIMNCTNTCPKHLNPARAIIALKQLCVGMK 427 >gi|298486515|ref|ZP_07004575.1| Succinate dehydrogenase iron-sulfur protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158992|gb|EFI00053.1| Succinate dehydrogenase iron-sulfur protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 234 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +YR+NP+ P M + VD MVLD L +K + D + RRSCREG+CG Sbjct: 1 MLQVSVYRYNPEQDATPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMNI+G N LAC+ + + K + V PLP + VI+DLVVDMS FY Q+ ++P+L+ Sbjct: 60 SDGMNINGKNGLACITPLSAVVAKNRLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E LQ+ E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L Sbjct: 120 NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD ERL +L+DPF ++RC IMNC CPKGLNP KAI ++ MLL + Sbjct: 180 DSRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV 234 >gi|238024135|ref|YP_002908367.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia glumae BGR1] gi|237878800|gb|ACR31132.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Burkholderia glumae BGR1] Length = 235 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 168/232 (72%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR++PD P + TY ++L M+LD L +K +D TL RRSCREGICGS Sbjct: 5 RVLHVYRYDPDRDARPRLQTYEIELAAGERMLLDVLGRLKA-LDETLAYRRSCREGICGS 63 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +++++ I + PLP + V++DL+VDM+ F++Q+ SI P+L + Sbjct: 64 DAMNINGRNGLACLTNLRELPAEITLRPLPGLPVVRDLIVDMTDFFNQYHSIRPYLINDT 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E QS E+R+++DGLYEC++CACCST CPSYWWN D+++GPA LLQAYR++ DSR Sbjct: 124 PPPERERPQSPEEREQLDGLYECILCACCSTQCPSYWWNPDKFVGPAGLLQAYRFIADSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI I+ ML R + Sbjct: 184 DQATASRLDDLEDPYRLFRCRTIMNCASVCPKGLNPAQAIGNIRSMLTRRTV 235 >gi|56414148|ref|YP_151223.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363070|ref|YP_002142707.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205359774|ref|ZP_02832137.2| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|56128405|gb|AAV77911.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094547|emb|CAR60067.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205343233|gb|EDZ29997.1| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085003|emb|CBY94792.1| succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 239 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 237 >gi|163802537|ref|ZP_02196429.1| succinate dehydrogenase iron-sulfur subunit [Vibrio sp. AND4] gi|159173620|gb|EDP58439.1| succinate dehydrogenase iron-sulfur subunit [Vibrio sp. AND4] Length = 236 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 112/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y ++++ M++ L + + DP+++ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDTKPYMKDYPLEVEEGSDMMVLDALILLKEQDPSISFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ I + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDG 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQ ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQLPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL +L+D F ++RCH IMNC CPKGLNP KAI IK ML++R I Sbjct: 184 RDTATDERLSDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLVNRSI 236 >gi|330829374|ref|YP_004392326.1| succinate dehydrogenase iron-sulfur protein [Aeromonas veronii B565] gi|328804510|gb|AEB49709.1| Succinate dehydrogenase iron-sulfur protein [Aeromonas veronii B565] Length = 238 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 165/237 (69%), Gaps = 6/237 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +YR+NPD P M Y +D+ + MVLD L+ +K ++DPTL RRSCREG+CG Sbjct: 3 VTFSVYRYNPDVDNVPHMKEYRLDIPEGSDMMVLDALIQLK-ELDPTLAFRRSCREGVCG 61 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S G+N++G N LAC+ + D + + PLP + VI+DLV+DM+ FY+Q ++P+L Sbjct: 62 SDGLNMNGKNGLACITPLSDLLKKGNNVVIRPLPGLPVIRDLVIDMTQFYTQWEKVKPFL 121 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P +E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYRW Sbjct: 122 INDDKLPPVREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRW 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L DSRD ERL NL+D F ++RCH IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 182 LADSRDTATTERLGNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGQIKSMLLNRAV 238 >gi|90580053|ref|ZP_01235861.1| succinate dehydrogenase catalytic subunit [Vibrio angustum S14] gi|90438938|gb|EAS64121.1| succinate dehydrogenase catalytic subunit [Vibrio angustum S14] Length = 237 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 159/234 (67%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +++ M++ L + + D TL+ RRSCREG+CGS Sbjct: 4 NFSIYRYNPDVDNAPHMKGYTLEVPEGSDMMVLDALILLKEQDSTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K I + PLP + V++DL++DM FY+ + ++P+L Sbjct: 64 GINMNGKNGLACITPLSALMDKSTIVIRPLPGLPVVRDLIIDMEQFYTNYAKVKPFLIDD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQ+ EDR ++DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GAVPPARENLQAPEDRAQLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLSNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 237 >gi|260776540|ref|ZP_05885435.1| succinate dehydrogenase iron-sulfur protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607763|gb|EEX34028.1| succinate dehydrogenase iron-sulfur protein [Vibrio coralliilyticus ATCC BAA-450] Length = 236 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 2/233 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NPD P M Y +++D M++ L + + DPT+ RRSCREG+CGS Sbjct: 4 NFSLYRYNPDVDDKPYMKDYILEVDEGSDMMVLDALILLKEQDPTIAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+N++G N LAC+ + + PLP + V++DL+VDM+ FY + ++P+L Sbjct: 64 GLNMNGKNGLACITPLSALAGDKLVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIDDD 123 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P++E LQS ++R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDS Sbjct: 124 ALPPSRENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDS 183 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 184 RDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKTMLVNRSV 236 >gi|300120556|emb|CBK20110.2| unnamed protein product [Blastocystis hominis] Length = 253 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 133/242 (54%), Positives = 169/242 (69%), Gaps = 3/242 (1%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 KI KN K + I+R++ + P + Y VD+++CG MVLD L IKN+ DPT Sbjct: 8 KINATEDKPKNYKIFSIFRFDNERDNKPHYEKYAVDMNDCGTMVLDALFKIKNEQDPTFV 67 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNI+G N LAC+ + V PLPH+ VIKDLV D+++FY Q Sbjct: 68 FRRSCREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQ 127 Query: 136 HRSIEPWLKTV---SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + SI+PWL+ S E LQSHEDR +DGLYEC++CACCSTSCPSYWW+ D+YLG Sbjct: 128 YASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLG 187 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P+IL QAYRW+ DSRDE ERL +L+D ++LYRCH IMNCT +CPK LNP ++I K+K Sbjct: 188 PSILQQAYRWIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKK 247 Query: 253 ML 254 + Sbjct: 248 AI 249 >gi|288941377|ref|YP_003443617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Allochromatium vinosum DSM 180] gi|288896749|gb|ADC62585.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Allochromatium vinosum DSM 180] Length = 230 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 118/230 (51%), Positives = 161/230 (70%), Gaps = 2/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NPD P M Y V G M+ D LL +K K D + + R SC EG+CGS Sbjct: 3 ISVYRYNPDTDPRPRMQDYEV-KTFQGMMLRDALLEVK-KQDESFSFRHSCGEGVCGSDA 60 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 +N +G N LACV + ++K IAV PLP VI+DLVVDM+ FY Q+R+++P+L P Sbjct: 61 VNANGRNVLACVTPITELKTPIAVRPLPGRPVIRDLVVDMTQFYEQYRAVKPYLVRKDPL 120 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P +E+ QS DR K+DGLYEC++C CCST+CPS+WWN D++ GPA LLQ++R+L DSRD+ Sbjct: 121 PEQEIPQSPADRDKLDGLYECILCGCCSTACPSFWWNPDKFHGPAALLQSWRFLADSRDQ 180 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLD LE P++L+RCH+IMNC + CPKGLNP +AI IK ++L++ + Sbjct: 181 ATEERLDALEGPYKLFRCHSIMNCVEVCPKGLNPTRAIGHIKELMLEKGL 230 >gi|89573813|gb|ABD77132.1| succinate dehydrogenase complex subunit B [Tamandua tetradactyla] Length = 236 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 136/229 (59%), Positives = 173/229 (75%), Gaps = 3/229 (1%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 + A +K++ IYRW+PD P M T+ +DL+ CGPMVLD L+ IKN++D +LT Sbjct: 6 VQTAVATTPRIKKFAIYRWDPDKAGDKPHMQTFEIDLNKCGPMVLDALIKIKNEVDASLT 65 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYS 134 RRSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+F++ Sbjct: 66 FRRSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFFA 125 Query: 135 QHRSIEPWLKTVSPKPAKELLQSH-EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q++SIEP+LK + EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGP Sbjct: 126 QYKSIEPYLKKKDESQKGKQYTQSLEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGP 185 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 A+L+QAYRW+IDSRD+F+ ERL L+DPF LYRCHTIMNCT +CPKGLN Sbjct: 186 AVLMQAYRWMIDSRDDFRAERLAKLQDPFSLYRCHTIMNCTLTCPKGLN 234 >gi|292490837|ref|YP_003526276.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus halophilus Nc4] gi|291579432|gb|ADE13889.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus halophilus Nc4] Length = 231 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 116/230 (50%), Positives = 162/230 (70%), Gaps = 1/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +RIYR+NP+ P M Y + M+LD L I+ D +L+ RRSC EG+CGS G Sbjct: 3 FRIYRYNPETDTKPYMQDYALSETQPDMMLLDALEKIRA-QDESLSFRRSCGEGVCGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + +K I + PLP VI+DLVVD+S FY Q+R+++PW+ P Sbjct: 62 MNINGRNGLACITPLASLKEPIVLRPLPGRPVIRDLVVDLSQFYQQYRAVKPWMIREDPV 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P E LQS E+R+++DGLYEC++CACCST+CPS+WWN +++ GPA LL AYR+++D+RD+ Sbjct: 122 PEVEFLQSPEERKQLDGLYECILCACCSTACPSWWWNPEKFRGPAALLWAYRFVVDNRDQ 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERL L+D ++L+RCHTIMNC CPK LNPA+AI++IK ++ I Sbjct: 182 ATEERLSELDDAYKLFRCHTIMNCADVCPKNLNPAEAISRIKHRMMKDSI 231 >gi|118594805|ref|ZP_01552152.1| succinate dehydrogenase catalytic subunit [Methylophilales bacterium HTCC2181] gi|118440583|gb|EAV47210.1| succinate dehydrogenase catalytic subunit [Methylophilales bacterium HTCC2181] Length = 249 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 120/227 (52%), Positives = 164/227 (72%), Gaps = 1/227 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR++PD P M +Y V++ + M+LD L+ IK+ D +L++R SCREG+CGS Sbjct: 2 KISIYRFDPDKDKKPYMQSYDVEVTHKDVMLLDLLIKIKST-DDSLSMRMSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LACV + D+K + + P+P + VI+DLVV+M F+ Q+ S++P+L Sbjct: 61 SMNINGKNGLACVTKISDLKQPVVIRPMPGLPVIRDLVVNMDQFFKQYNSVKPFLINSED 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P KE LQS EDR+K+DGLYEC++C C+TSCPS+WW+ D+++GPA LLQAYR+L DSRD Sbjct: 121 PPKKERLQSPEDRKKLDGLYECILCGACTTSCPSFWWSPDKFVGPAGLLQAYRFLADSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ERL +L+DP RLYRCH IMNC CPKGLNP+KAI IK M + Sbjct: 181 DGSEERLVDLDDPDRLYRCHNIMNCADVCPKGLNPSKAITGIKQMQI 227 >gi|330821107|ref|YP_004349969.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Burkholderia gladioli BSR3] gi|327373102|gb|AEA64457.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Burkholderia gladioli BSR3] Length = 235 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 168/232 (72%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR++PD P + + ++L M+LD L +K ID TL+ RRSCREGICGS Sbjct: 5 RVVNVYRYDPDRDTRPRLQRFELELTAEDRMLLDVLGRLKA-IDETLSYRRSCREGICGS 63 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ +M+ + I + PLP + V++DL+VDM+ F++Q+ SI P+L + Sbjct: 64 DAMNINGRNGLACLTNMQALPAEITLRPLPGLPVVRDLIVDMTDFFNQYHSIRPYLINDT 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E QS E+R ++DGLYEC++CACCST CPSYWWN D+++GPA LLQAYR++ DSR Sbjct: 124 PPPERERRQSPEERDQLDGLYECILCACCSTQCPSYWWNPDKFVGPAGLLQAYRFIADSR 183 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ RLD+LEDP+RL+RC TIMNC+ CPKGL+PA AIA I+ ML+ R + Sbjct: 184 DQATASRLDDLEDPYRLFRCRTIMNCSSVCPKGLDPALAIADIRAMLVRRTV 235 >gi|268370126|ref|NP_001161244.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit-like protein [Nasonia vitripennis] Length = 330 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 127/238 (53%), Positives = 169/238 (71%), Gaps = 5/238 (2%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 E +K +IYRWNP+ P + + VDL+ CG MVLD L YIK ++DPTL+ RRSC Sbjct: 64 QKEPFIKIVKIYRWNPEKPTTKPYLQKFEVDLNKCGSMVLDILHYIKAELDPTLSFRRSC 123 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI+G NTLAC+ +D + ++ +YPLPH I+DL+ DMSHF Q++ I Sbjct: 124 REGICGSCSMNINGINTLACITKVTRDQEKSLLIYPLPHTYTIRDLIPDMSHFLEQYKKI 183 Query: 140 EPWLKTVSPKPAKELLQSHE---DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +P+LK + Q + DR KIDGLYEC++C CCS +CP YWW ++YLGPA+L Sbjct: 184 DPYLKRPQEHDFVGMRQLMQSERDRAKIDGLYECILCGCCSYACPPYWWAGEKYLGPAVL 243 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +QAYRW+IDSRD+ ERL L D F ++RCHTI NCT++CPKGLNP +AIA++K ++ Sbjct: 244 MQAYRWIIDSRDQTHEERLGKLRDFFSVFRCHTIFNCTKTCPKGLNPGRAIAELKRLV 301 >gi|289209038|ref|YP_003461104.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thioalkalivibrio sp. K90mix] gi|288944669|gb|ADC72368.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thioalkalivibrio sp. K90mix] Length = 233 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 118/232 (50%), Positives = 160/232 (68%), Gaps = 1/232 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGP-MVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NP+ P M + + D P M+L L + + D +L RRSC+ G+CGS Sbjct: 2 EFSIYRFNPETDTLPKMQRFTLPDDQVEPGMMLLDALLLLKEQDDSLGFRRSCQHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N LAC+ + D++ + + P P M VI+DL+VDM +F+ Q+R EPWL S Sbjct: 62 DGMNINGMNGLACITPLADLEAPVTLRPFPGMPVIRDLIVDMDNFWEQYRRAEPWLVNDS 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P+P E QS EDR ++DGLYEC++C CCS +CPSYWWN D++LGPA LLQA R++ DSR Sbjct: 122 PEPEVERKQSPEDRDQLDGLYECILCGCCSAACPSYWWNPDKFLGPAALLQAARFIQDSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DE RL L+D ++LYRCHTIMNCTQ CPKGLNP++AI I+ +L + + Sbjct: 182 DEATDHRLAQLDDAWKLYRCHTIMNCTQVCPKGLNPSRAIGDIRRTMLKKSL 233 >gi|89073519|ref|ZP_01160042.1| succinate dehydrogenase [Photobacterium sp. SKA34] gi|89050783|gb|EAR56264.1| succinate dehydrogenase [Photobacterium sp. SKA34] Length = 237 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 118/234 (50%), Positives = 159/234 (67%), Gaps = 3/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IYR+NPD P M Y +++ M++ L + + D TL+ RRSCREG+CGS Sbjct: 4 NFSIYRYNPDVDNAPHMKGYTLEVPEGSDMMVLDALILLKEQDSTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 G+N++G N LAC+ + K I + PLP + V++DL++DM FY+ + ++P+L Sbjct: 64 GINMNGKNGLACITPLSALMDKSTIVIRPLPGLPVVRDLIIDMEQFYTNYAKVKPFLIDD 123 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQ+ E+R ++DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYRWLID Sbjct: 124 GAVPPARENLQAPEERAQLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERL NL+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLSNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLKRAV 237 >gi|94499003|ref|ZP_01305541.1| succinate dehydrogenase, iron-sulfur protein [Oceanobacter sp. RED65] gi|94428635|gb|EAT13607.1| succinate dehydrogenase, iron-sulfur protein [Oceanobacter sp. RED65] Length = 234 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 160/232 (68%), Gaps = 2/232 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M Y VD+ +++ +L + + DP++ RRSCREG+CGS G Sbjct: 3 VSVYRYNPEKDSAPYMQDYEVDIPEGKDLMVLDVLNLIKEQDPSIAYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI G N LAC+ + + + PLP + VI+DLV+DMS FY Q ++P+L+ + Sbjct: 63 MNISGKNGLACITPISEGAKGNKLVLRPLPGLPVIRDLVIDMSLFYQQFEKVKPFLQNNT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS EDR K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L DSR Sbjct: 123 PAPAIERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +RL +L+DPF ++RC IMNC CPKGLNP +AI I+ MLL R+I Sbjct: 183 DTATQDRLADLDDPFSVFRCRGIMNCVNVCPKGLNPTRAIGHIRSMLLSREI 234 >gi|89573811|gb|ABD77131.1| succinate dehydrogenase complex subunit B [Dasypus novemcinctus] Length = 237 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 138/227 (60%), Positives = 175/227 (77%), Gaps = 3/227 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M T+ +DL+ CGPMVLD L+ IKN+ID +LT R Sbjct: 8 TAAATTPRVKKFAIYRWDPDKVGDKPHMQTFEIDLNKCGPMVLDALIKIKNEIDSSLTFR 67 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM V+KDLV D+S+F++Q+ Sbjct: 68 RSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPLPHMYVMKDLVPDLSNFFAQY 127 Query: 137 RSIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +SIEP+LK + +QS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+ Sbjct: 128 KSIEPYLKKKDESQKGTQYMQSLEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAV 187 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 L+QAYRW+IDSRD+F+ ERL L+DPF LYRCHTIMNCT +CPKGLN Sbjct: 188 LMQAYRWMIDSRDDFRAERLAKLQDPFSLYRCHTIMNCTLTCPKGLN 234 >gi|145299314|ref|YP_001142155.1| succinate dehydrogenase, iron-sulfur protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852086|gb|ABO90407.1| succinate dehydrogenase, iron-sulfur protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 238 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 165/237 (69%), Gaps = 6/237 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +YR+NPD P M Y +D+ + MVLD L+ +K ++DPTL RRSCREG+CG Sbjct: 3 VTFSVYRYNPDVDNVPYMKEYRLDIPEGSDMMVLDALIQLK-ELDPTLAFRRSCREGVCG 61 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S G+N++G N LAC+ + D + + PLP + VI+DLV+DM+ FY+Q ++P+L Sbjct: 62 SDGLNMNGKNGLACITPLSDLLKKGNNVVIRPLPGLPVIRDLVIDMTQFYTQWEKVKPFL 121 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P +E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYRW Sbjct: 122 INDEKLPPVREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRW 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L DSRD ERL NL+D F ++RCH IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 182 LADSRDTAATERLGNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGQIKSMLLNRAV 238 >gi|229541067|sp|A8WPF0|DHSB_CAEBR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|309365998|emb|CAP22357.2| CBR-SDHB-1 protein [Caenorhabditis briggsae AF16] Length = 282 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 138/240 (57%), Positives = 179/240 (74%), Gaps = 5/240 (2%) Query: 20 APTGEK-NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P +K + IYR+NP+ G P + + VDLD CG M+LD L+ IKN++DPTLT R Sbjct: 29 QPKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFR 88 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K D + +YPLPHM V+KDLV DM+ FY+Q+ Sbjct: 89 RSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQY 148 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 SI+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 149 ASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPA 208 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK LNPAKAI +IK +L Sbjct: 209 VLMQAYRWVIDSRDDYAQERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLL 268 >gi|307209225|gb|EFN86332.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Harpegnathos saltator] Length = 328 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 134/257 (52%), Positives = 176/257 (68%), Gaps = 14/257 (5%) Query: 3 EIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLD 61 E LP SR E L+ R+YRWNP+ + P + + VDL+ CG MVLD Sbjct: 53 ECKLPPESRKT----------EPRLQIVRVYRWNPEKQHVKPHIQQFTVDLNKCGTMVLD 102 Query: 62 GLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV 121 L IK + DPTL+ RRSCREGICG+C MNI+G NTLAC+ +++ + +YPLPH V Sbjct: 103 VLTLIKAEHDPTLSFRRSCREGICGNCSMNINGVNTLACITKVEESAKPLVIYPLPHTYV 162 Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPA---KELLQSHEDRQKIDGLYECVMCACCST 178 I+DLV D+ F+ Q R+I+P+LK +++LQS DR+K+DGL+EC+MCACC+ Sbjct: 163 IRDLVPDLRQFFDQFRAIDPYLKRPGEDNILGVRQVLQSTRDRKKLDGLHECIMCACCTY 222 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP YWW D+YLGPA+LLQAYRW+IDSRD ERL L D + +YRCHTI NCT++CP Sbjct: 223 ACPPYWWLGDKYLGPAVLLQAYRWVIDSRDMAHKERLGKLRDFYSIYRCHTIFNCTKTCP 282 Query: 239 KGLNPAKAIAKIKMMLL 255 KGLNP KAIA++K +L Sbjct: 283 KGLNPGKAIAQLKRLLA 299 >gi|205357298|ref|ZP_02346598.2| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322598|gb|EDZ10437.1| succinate dehydrogenase, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 239 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIHLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 237 >gi|120554080|ref|YP_958431.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter aquaeolei VT8] gi|120323929|gb|ABM18244.1| succinate dehydrogenase subunit B [Marinobacter aquaeolei VT8] Length = 234 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 118/231 (51%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M ++L +++ +L + + DPT+ RRSCREG+CGS G Sbjct: 3 VSLYRYNPETDNAPYMQDVEIELPEGKDLMVLDVLALAKEKDPTVAFRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + D + + PLP + VI+DLVVDM FY Q+ + P+L + Sbjct: 63 MNMNGKNGLACITPVSDVVKNNKLVLRPLPGLPVIRDLVVDMGLFYKQYEKVMPYLVNDN 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS EDR+K+DGLYEC++CACCST+CPS+WWN D+++GP+ LLQAYR+L DSR Sbjct: 123 PAPAIERLQSPEDREKLDGLYECILCACCSTACPSFWWNPDKFIGPSGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D Q ERL NL+DPF ++RC IMNC CPKGLNP KAI I+ +LL R Sbjct: 183 DTAQAERLANLDDPFSVFRCRGIMNCVSVCPKGLNPTKAIGHIRNLLLQRA 233 >gi|170579815|ref|XP_001894995.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial [Brugia malayi] gi|158598226|gb|EDP36166.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial, putative [Brugia malayi] Length = 279 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 141/238 (59%), Positives = 186/238 (78%), Gaps = 4/238 (1%) Query: 21 PTGEKNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 P K +K + IYR+NP+ G+ P + Y +DLD+CG M+LD L+ IKN+IDPTLT RRS Sbjct: 26 PPTGKRVKTFEIYRYNPEKPGSQPQLQKYDIDLDDCGAMILDALIKIKNEIDPTLTFRRS 85 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNI+G NTLAC K ++ + +YPLPHM VIKDLV DM+ FY+Q+ S Sbjct: 86 CREGICGSCAMNINGENTLACICKIDENTSKSTKIYPLPHMFVIKDLVPDMNLFYAQYAS 145 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEPWLK + K++ Q+ ++R+K++GLYEC++CACCSTSCPSYWWN+D+YLGPAIL Sbjct: 146 IEPWLKKKNKLVLGEKQMFQTEKEREKLNGLYECILCACCSTSCPSYWWNADKYLGPAIL 205 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LQ+YRW+IDSRD++ ERL + D F +++CHTI+NCT++CPK LNPAKAI +IK +L Sbjct: 206 LQSYRWMIDSRDDYAEERLSKIHDHFSVFKCHTILNCTKTCPKHLNPAKAIGEIKKLL 263 >gi|300715877|ref|YP_003740680.1| succinate dehydrogenase, iron sulfur protein [Erwinia billingiae Eb661] gi|299061713|emb|CAX58829.1| Succinate dehydrogenase, iron sulfur protein [Erwinia billingiae Eb661] Length = 238 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 121/234 (51%), Positives = 156/234 (66%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NP+ P M Y ++ + M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPEVDDAPHMQEYSLESEEGRDMMLLDALMRLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GINMNGKNGLACITPVSALGGGSKKIVIRPLPGLPVIRDLVVDMGQFYTQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGENPPAREHLQEPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D RD RLDNL D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DDRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRG 237 >gi|197284465|ref|YP_002150337.1| succinate dehydrogenase iron-sulfur subunit [Proteus mirabilis HI4320] gi|227356643|ref|ZP_03841029.1| succinate dehydrogenase iron-sulfur protein [Proteus mirabilis ATCC 29906] gi|194681952|emb|CAR41365.1| succinate dehydrogenase iron-sulfur protein [Proteus mirabilis HI4320] gi|227163151|gb|EEI48082.1| succinate dehydrogenase iron-sulfur protein [Proteus mirabilis ATCC 29906] Length = 238 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 159/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEVPEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + ++ I + PLP + VI+DL+VDM+ FY+Q+ I P++ Sbjct: 64 GVNMNGKNGLACITPISSLQKGSKKIVIRPLPGLPVIRDLIVDMTQFYTQYEKIRPYVIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DDKNPPARENLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD+L D F ++RCH IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETESRLDDLSDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLK 235 >gi|88798681|ref|ZP_01114264.1| succinate dehydrogenase, iron-sulfur protein [Reinekea sp. MED297] gi|88778444|gb|EAR09636.1| succinate dehydrogenase, iron-sulfur protein [Reinekea sp. MED297] Length = 235 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 119/230 (51%), Positives = 164/230 (71%), Gaps = 3/230 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NP+ P M Y V++ + +++ +L + + DPTL+ RRSCREG+CGS Sbjct: 2 KVSVYRFNPEVDKRPYMQDYDVEIPSGKDLMVLDVLNLLKEQDPTLSYRRSCREGVCGSD 61 Query: 89 GMNIDGTNTLACVKDMKDI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GMNI+GTN LAC+ + D+ + + PLP + VI+DLV+DMS FY Q+ ++P+L Sbjct: 62 GMNINGTNGLACITSLSDVGGADAKLVLRPLPGLPVIRDLVIDMSTFYKQYEKVQPYLIN 121 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L D Sbjct: 122 DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLAD 181 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 SRD +RL L+DPF ++RC IMNC CPKGLNP +AI I+ MLL Sbjct: 182 SRDTATEDRLAQLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIRSMLL 231 >gi|300122998|emb|CBK24005.2| unnamed protein product [Blastocystis hominis] Length = 252 Score = 241 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 135/230 (58%), Positives = 167/230 (72%), Gaps = 3/230 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 K +RIYR+NP P ++Y +DL +CG MVLD L IKN+ DPT RRSCREGICGS Sbjct: 19 KLFRIYRYNPAKDLKPHYESYVIDLMDCGTMVLDALFKIKNEQDPTFAFRRSCREGICGS 78 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV- 146 C MNI+G N LAC+ + A V PLPHM VIKDL+ DM++FY Q+ SI+PWL+ Sbjct: 79 CAMNINGENGLACLTKIPKNTDACTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQKKS 138 Query: 147 --SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 S E LQSHEDR +DGLYEC++CACCSTSCPSYWW+ D+YLGP+IL QAYRW+ Sbjct: 139 AVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQQAYRWIA 198 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 DSRDE ERL +L+D ++LYRCH IMNCT +CPK LNP ++I K+K + Sbjct: 199 DSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKHAI 248 >gi|87119169|ref|ZP_01075067.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Marinomonas sp. MED121] gi|86165560|gb|EAQ66827.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Marinomonas sp. MED121] Length = 234 Score = 241 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 158/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR+NP+ P M VDL +++ +L + DP+++ RRSCREG+CGS G Sbjct: 3 VSIYRYNPEVDDAPYMQDVQVDLPEGKDLMVLDVLNLMKDKDPSVSYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ M + + PLP + V++DLVVDM FY Q+ I P+L + Sbjct: 63 MNMNGKNGLACITPMSAVVKNDKLVLRPLPGLPVVRDLVVDMGQFYKQYEKIRPYLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS E+R+K+DGLYEC++CACCST+CPS+WWN D+++GP+ LLQAYR+LIDSR Sbjct: 123 PAPAIERLQSPEEREKLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLQAYRFLIDSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL L+DPF ++RCH IMNC CPKGLNP KAI I+ MLL R Sbjct: 183 DNATQERLSELDDPFSVFRCHGIMNCVNVCPKGLNPTKAIGNIRTMLLQRA 233 >gi|324516860|gb|ADY46654.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 281 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 145/246 (58%), Positives = 185/246 (75%), Gaps = 4/246 (1%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G AP K++K + IYR+NP+ P M Y VDL CG MVLD L+ IKN IDPT Sbjct: 22 GATMAAPAKMKHMKTFEIYRFNPEQPGSKPRMQKYDVDLSKCGNMVLDALIKIKNDIDPT 81 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHF 132 LT RRSCREGICGSC MNI G NTLAC+ ++++ KG + +YPLPHM VI+DLVVDM+ F Sbjct: 82 LTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPLPHMFVIRDLVVDMNLF 141 Query: 133 YSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 Y+Q+ I+PWL+ K+ QS ++++KIDGLYEC++CACCSTSCPSYWWN+D+Y Sbjct: 142 YAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCSTSCPSYWWNADKY 201 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA+L+QAYRW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK LNPAKAI +I Sbjct: 202 LGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEI 261 Query: 251 KMMLLD 256 KM+L Sbjct: 262 KMLLTK 267 >gi|197264991|ref|ZP_03165065.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243246|gb|EDY25866.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 239 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 118/232 (50%), Positives = 157/232 (67%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 5 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 65 GLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 124 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 125 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL Sbjct: 185 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQ 236 >gi|83647433|ref|YP_435868.1| succinate dehydrogenase iron-sulfur subunit [Hahella chejuensis KCTC 2396] gi|83635476|gb|ABC31443.1| succinate dehydrogenase, iron-sulfur protein [Hahella chejuensis KCTC 2396] Length = 234 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 119/231 (51%), Positives = 160/231 (69%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR+NP+ P M +++ +++ +L + + DPTL RRSCREG+CGS G Sbjct: 3 VSIYRYNPEVDEAPYMQDVELEVPAGKDLMVLDVLGLMKEKDPTLAYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + + + PLP + VI+DLVVDM+ FY Q+ I+P+L + Sbjct: 63 MNMNGKNGLACITPLSQVVKNNKLVLRPLPGLPVIRDLVVDMAIFYKQYEKIKPFLVNDN 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L+DSR Sbjct: 123 PPPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFLVDSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL NL+DPF ++RC IMNC CPKGLNP +AI I+ MLL R Sbjct: 183 DTSTEERLANLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIRNMLLQRA 233 >gi|221061271|ref|XP_002262205.1| Iron-sulfur subunit of succinate dehydrogenase [Plasmodium knowlesi strain H] gi|193811355|emb|CAQ42083.1| Iron-sulfur subunit of succinate dehydrogenase,putative [Plasmodium knowlesi strain H] Length = 316 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 142/253 (56%), Positives = 187/253 (73%), Gaps = 4/253 (1%) Query: 8 KRSRVKRGKIWNAPTGEKN-LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI 66 K VK + ++N LK++ I+R+NP N P M+T+ VD+DNCGPMVLD L+ I Sbjct: 42 KDESVKEKFDHAKNSMQQNELKKFSIFRYNPQNSKRPKMETFEVDIDNCGPMVLDVLIKI 101 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDL 125 K++ID TL+ RRSCREGICGSC MNI+G N LAC+ ++ K I ++PLP++ +IKDL Sbjct: 102 KDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEITEIHPLPNLYIIKDL 161 Query: 126 VVDMSHFYSQHRSIEPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 V D+++FY+Q++SI+PW KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSY Sbjct: 162 VPDLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSY 221 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 WWN + YLGPA L+QAYRW++DSRDE+ ERL + D +LYRCH IMNCT CPKGL+P Sbjct: 222 WWNPEYYLGPATLMQAYRWIVDSRDEYTKERLMEVNDTMKLYRCHGIMNCTLCCPKGLDP 281 Query: 244 AKAIAKIKMMLLD 256 AKAI +K ++ + Sbjct: 282 AKAIRNMKELVQE 294 >gi|297537889|ref|YP_003673658.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylotenera sp. 301] gi|297257236|gb|ADI29081.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylotenera sp. 301] Length = 246 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 120/230 (52%), Positives = 167/230 (72%), Gaps = 1/230 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR+NPD P M Y V L++ M+LD LL IK+ +D +L+LR+SCREG+CGS Sbjct: 2 KFSIYRFNPDVDKKPYMQDYDVVLEDSDQMLLDALLRIKD-LDDSLSLRKSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 MNI+G N LAC+ + +++ + + P+P + VI+DLVVDM+ F+ + S++P+L P Sbjct: 61 SMNINGKNGLACITKLSELEEPVVLRPMPGLPVIRDLVVDMTQFFENYNSVKPYLVNNDP 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E LQS EDR K+DGLYEC++C C+TSCPS+WWN D+++GPA L+QAYR+++DSRD Sbjct: 121 PPETERLQSPEDRAKLDGLYECILCGACTTSCPSFWWNPDKFVGPAGLMQAYRFMVDSRD 180 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ERL+NLE P RLYRCH IMNC + CPK LNP AIAKIK + ++ Sbjct: 181 QAIDERLENLEQPERLYRCHNIMNCVEVCPKKLNPNAAIAKIKDLKFEQA 230 >gi|330720439|gb|EGG98752.1| Succinate dehydrogenase iron-sulfur protein [gamma proteobacterium IMCC2047] Length = 234 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 158/234 (67%), Gaps = 3/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +YR+NP+ P M +D MVLD L +K DP++ RRSCREG+CG Sbjct: 1 MLTVSLYRYNPETDKAPYMQDVQLDTGGKDLMVLDVLELLKA-QDPSIAYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVK--DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMN++G N LAC+ + + PLP + V++DLVVDMS FY Q+ ++P+L Sbjct: 60 SDGMNMNGKNGLACITALSETVKNNKLVLRPLPGLPVVRDLVVDMSIFYKQYEKVKPFLI 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P PA E +QS E+R+K+DGLYEC++CACCSTSCPS+WWN DR++GPA LLQAYR+L Sbjct: 120 NNTPAPAIERMQSPEEREKLDGLYECILCACCSTSCPSFWWNPDRFIGPAGLLQAYRFLA 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD +RL NL+DPF ++RC IMNC CPKGLNP +AI I+ ML+ R Sbjct: 180 DSRDTATADRLANLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIREMLIRRA 233 >gi|312088103|ref|XP_003145730.1| succinate dehydrogenase iron-sulfur protein [Loa loa] gi|307759106|gb|EFO18340.1| succinate dehydrogenase iron-sulfur protein [Loa loa] Length = 279 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 140/238 (58%), Positives = 182/238 (76%), Gaps = 4/238 (1%) Query: 21 PTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 P +K + IYR++P+ P + Y +DLD+CG M+LD L+ IKN+IDPTLT RRS Sbjct: 26 PPTGSRVKTFEIYRYDPEKPGSKPQLQKYDIDLDDCGAMILDALIKIKNEIDPTLTFRRS 85 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNIDG NTLAC K ++ + +YPLPHM VIKDLV DMS FY+Q+ S Sbjct: 86 CREGICGSCAMNIDGENTLACTCKINENTSKSSKIYPLPHMFVIKDLVPDMSLFYAQYAS 145 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 IEPWLK + K++ Q+ ++R+K+DGLYEC++CACCSTSCPSYWWN+D+YLGPAIL Sbjct: 146 IEPWLKKKNKLVLGEKQMYQTEKEREKLDGLYECILCACCSTSCPSYWWNADQYLGPAIL 205 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LQ+YRW++DSRD++ ERL + D F ++CHTI+NCT++CPK LNPAKAI +IK +L Sbjct: 206 LQSYRWIVDSRDDYAEERLSKIHDHFSAFKCHTILNCTKTCPKHLNPAKAIGEIKKLL 263 >gi|117617620|ref|YP_856457.1| succinate dehydrogenase iron-sulfur protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559027|gb|ABK35975.1| succinate dehydrogenase iron-sulfur protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 238 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +YR+NPD P M Y +D+ + MVLD L+ +K ++DPTL RRSCREG+CG Sbjct: 3 VTFSVYRYNPDVDNVPHMKEYRLDIPEGSDMMVLDALIQLK-ELDPTLAFRRSCREGVCG 61 Query: 87 SCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S G+N++G N LAC+ + D + + PLP + VI+DLV+DM+ FY+Q ++P+L Sbjct: 62 SDGLNMNGKNGLACITPLSDLLKKGNNVVIRPLPGLPVIRDLVIDMTQFYTQWEKVKPFL 121 Query: 144 KTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P +E LQS E+R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYRW Sbjct: 122 INDEKLPPVREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRW 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L DSRD +RL NL+D F ++RCH IMNC CPKGLNP KAI +IK MLL+R + Sbjct: 182 LADSRDTAATDRLGNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGQIKSMLLNRAV 238 >gi|324517746|gb|ADY46909.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 291 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 145/246 (58%), Positives = 186/246 (75%), Gaps = 4/246 (1%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G AP K++K + IYR+NP+ P M Y VDL+ CG MVLD L+ IKN IDPT Sbjct: 32 GATMAAPAKMKHMKTFEIYRFNPEQPGSKPRMQKYDVDLNKCGNMVLDALIKIKNDIDPT 91 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHF 132 LT RRSCREGICGSC MNI G NTLAC+ ++++ KG + +YPLPHM VI+DLVVDM+ F Sbjct: 92 LTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPLPHMFVIRDLVVDMNLF 151 Query: 133 YSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 Y+Q+ I+PWL+ K+ QS ++++KIDGLYEC++CACCSTSCPSYWWN+D+Y Sbjct: 152 YAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCSTSCPSYWWNADKY 211 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA+L+QAYRW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK LNPAKAI +I Sbjct: 212 LGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEI 271 Query: 251 KMMLLD 256 KM+L Sbjct: 272 KMLLTK 277 >gi|261343506|ref|ZP_05971151.1| succinate dehydrogenase, iron-sulfur protein [Providencia rustigianii DSM 4541] gi|282568652|gb|EFB74187.1| succinate dehydrogenase, iron-sulfur protein [Providencia rustigianii DSM 4541] Length = 238 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 159/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEVKDGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + I + PLP + V++DL++DM+ FY+Q+ I P+L Sbjct: 64 GVNMNGKNGLACITPLSALTRNGKKIVIRPLPGLPVVRDLIIDMTQFYTQYEKIRPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + PA+E LQS R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DNKNPPARENLQSPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD+L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETDSRLDDLNDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIKSMLLK 235 >gi|85058853|ref|YP_454555.1| succinate dehydrogenase iron-sulfur subunit [Sodalis glossinidius str. 'morsitans'] gi|84779373|dbj|BAE74150.1| succinate dehydrogenase iron-sulfur subunit [Sodalis glossinidius str. 'morsitans'] Length = 238 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 159/232 (68%), Gaps = 4/232 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y + ++ M+L L + DP+L+ RRSCREG+CGS Sbjct: 3 VEFSIYRYNPDVDDKPRMQDYTLTVEEGRDMMLLDALIQLKEQDPSLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+N++G N LAC+ + + + + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPLSMLRKGDHKVVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPFLI 122 Query: 145 TVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL +YR+L Sbjct: 123 NSGRNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLASYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ID+RD Q RLD+L D F ++RCH+IMNC CPKGLNP KAI IK ML+ Sbjct: 183 IDNRDTHQQVRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLV 234 >gi|284007861|emb|CBA73768.1| succinate dehydrogenase iron-sulfur protein [Arsenophonus nasoniae] Length = 238 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 122/234 (52%), Positives = 156/234 (66%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y +D+ M+L L + DPTL RRSCREG+CGS Sbjct: 3 VEFSIYRYNPDVDNMPRMQDYSLDIAEGRDMMLLDALIQLKEKDPTLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+N++G N LAC+ + K I + PLP + V++DLVVDM+ FY+Q+ I P+L Sbjct: 63 DGLNMNGKNGLACITPLSALCRNKRKIVIRPLPGLPVVRDLVVDMAQFYTQYEKIRPYLI 122 Query: 145 TVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +E LQ+ R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NDGKNSPAREYLQTPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RLDNL D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 183 IDSRDTETETRLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLKR 236 >gi|281346729|gb|EFB22313.1| hypothetical protein PANDA_013300 [Ailuropoda melanoleuca] Length = 236 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 139/227 (61%), Positives = 175/227 (77%), Gaps = 4/227 (1%) Query: 17 IWNAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 + A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN++D TLT Sbjct: 6 VQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLT 65 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYS 134 RRSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+ Sbjct: 66 FRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYA 125 Query: 135 QHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q++SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLG Sbjct: 126 QYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLG 185 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 PA+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CPK Sbjct: 186 PAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPK 232 >gi|212712446|ref|ZP_03320574.1| hypothetical protein PROVALCAL_03540 [Providencia alcalifaciens DSM 30120] gi|212684903|gb|EEB44431.1| hypothetical protein PROVALCAL_03540 [Providencia alcalifaciens DSM 30120] Length = 238 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 120/232 (51%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEVKEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + I + PLP + VI+DL++DM+ FY+Q+ I P+L Sbjct: 64 GLNMNGKNGLACITPLSALTRSGKKIVIRPLPGLPVIRDLIIDMTQFYTQYEKIRPYLIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + PA+E LQS R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DNKNPPARENLQSPVQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD+L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETDSRLDDLNDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIKSMLLK 235 >gi|77165928|ref|YP_344453.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Nitrosococcus oceani ATCC 19707] gi|254434131|ref|ZP_05047639.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus oceani AFC27] gi|76884242|gb|ABA58923.1| succinate dehydrogenase subunit B [Nitrosococcus oceani ATCC 19707] gi|207090464|gb|EDZ67735.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus oceani AFC27] Length = 231 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 114/230 (49%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +RIYR+NP+ P M Y + M+LD L I+ D +L RRSC EG+CGS G Sbjct: 3 FRIYRYNPETDTKPYMQDYELAEIQPDMMLLDALEEIRA-QDESLAFRRSCGEGVCGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + +K +A+ PLP VI+DLVVD+S FY Q+R+++PWL P Sbjct: 62 MNINGRNGLACITPLASLKEPVALRPLPGRPVIRDLVVDLSQFYQQYRAVKPWLIREDPL 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P E LQS E+R+++DGLYEC++CACCST+CPS+WWN +++ GPA LL R++ D+RD+ Sbjct: 122 PEVEFLQSPEERKQLDGLYECILCACCSTACPSWWWNPEKFRGPAALLWVNRFVADNRDQ 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERL L+D ++L+RCHTIMNC CPK LNPA+AI+++K ++ I Sbjct: 182 ATEERLSELDDAYKLFRCHTIMNCADVCPKNLNPAEAISRLKHRMMKDSI 231 >gi|260597123|ref|YP_003209694.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter turicensis z3032] gi|260216300|emb|CBA29269.1| Succinate dehydrogenase iron-sulfur subunit [Cronobacter turicensis z3032] Length = 238 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEQEEGRDMMLLDALMLLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSNLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGHNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD ERLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETNERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|183598175|ref|ZP_02959668.1| hypothetical protein PROSTU_01554 [Providencia stuartii ATCC 25827] gi|188020342|gb|EDU58382.1| hypothetical protein PROSTU_01554 [Providencia stuartii ATCC 25827] Length = 238 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 121/232 (52%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y +++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEVPEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + I + PLP + VI+DL++DMS FY+Q+ I P+L Sbjct: 64 GVNMNGKNGLACITPLSALTRSGKKIVIRPLPGLPVIRDLIIDMSQFYTQYEKIRPYLIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + PA+E LQS R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DNKNPPARENLQSPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD+L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETDARLDDLNDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIKSMLLK 235 >gi|300176059|emb|CBK23370.2| unnamed protein product [Blastocystis hominis] Length = 263 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 132/239 (55%), Positives = 164/239 (68%), Gaps = 6/239 (2%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + IYR+NP P M+ Y VDL CG MVLD L +IK+ IDPT T RRSCR Sbjct: 12 STAPQYRLFEIYRFNPARDIKPHMERYAVDLSQCGGMVLDALFHIKDTIDPTFTFRRSCR 71 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNI+G N LAC+ + I + PLPHM VIKDLV+D ++ Y Q+ SI+P Sbjct: 72 EGICGSCSMNINGENGLACLTRIGKGSKTITIRPLPHMFVIKDLVIDQTNSYEQYNSIKP 131 Query: 142 WLKTVSPKPAKELLQSHE------DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 WL+ + L E DR K+DGLYEC++C CCSTSCPSYWWN D+YLGP + Sbjct: 132 WLQKKQKNEPTDDLYLTENLQSPQDRAKLDGLYECILCNCCSTSCPSYWWNPDKYLGPMV 191 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L QAYRW++DSRDE ERL +L+D ++LYRCH IMNCT SCPK LNP ++IA IK +L Sbjct: 192 LQQAYRWIVDSRDEMTEERLRDLDDVYKLYRCHAIMNCTHSCPKNLNPGRSIAHIKQLL 250 >gi|268590349|ref|ZP_06124570.1| succinate dehydrogenase, iron-sulfur protein [Providencia rettgeri DSM 1131] gi|291314259|gb|EFE54712.1| succinate dehydrogenase, iron-sulfur protein [Providencia rettgeri DSM 1131] Length = 238 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 117/232 (50%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR+NPD P M Y +++ M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 QFSIYRYNPDVDNAPRMQDYTLEVPEGRDMMLLDALIQIKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + I + PLP + V++DL++DM+ FY+Q+ I P+L Sbjct: 64 GLNMNGKNGLACITPLSALIRGGKKIVIRPLPGLPVVRDLIIDMTQFYTQYEKIRPYLIN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + PA+E LQ+ R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DNKNPPARENLQTPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD RLD+L D F ++RCH+IMNC CPKGLNP KAI IK MLL Sbjct: 184 DSRDTETDSRLDDLNDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIKSMLLK 235 >gi|195030288|ref|XP_001988000.1| GH10931 [Drosophila grimshawi] gi|193904000|gb|EDW02867.1| GH10931 [Drosophila grimshawi] Length = 335 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 135/236 (57%), Positives = 174/236 (73%), Gaps = 6/236 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+++K + IYRW P P + Y +D++ CGPM+LD L+ IKN++DPTLT RRSCREG Sbjct: 82 ERSMKTFEIYRWKP--GDKPKLQKYEIDMNECGPMILDALIKIKNEMDPTLTFRRSCREG 139 Query: 84 ICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 +CGSC MNI+G NTL+C + +YPLPH+ V +DLV D+S FY Q++SIEPW Sbjct: 140 VCGSCAMNINGLNTLSCIQAIDRKPGRVCRIYPLPHLYVKRDLVPDLSRFYQQYQSIEPW 199 Query: 143 LKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 L+ + LQ+ EDR ++DGLYEC++CACC T+CPSYWWNSD+YLGPAILLQA Sbjct: 200 LQRKDVNREVGKAQYLQAIEDRDRLDGLYECILCACCQTACPSYWWNSDKYLGPAILLQA 259 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YRW+IDSRDE RL L DPF++YRCHTI+NCT +CPK LNPA+AI K+K +L Sbjct: 260 YRWIIDSRDEATDHRLCMLTDPFKVYRCHTILNCTNTCPKNLNPAQAIIKLKQLLA 315 >gi|2662171|dbj|BAA23716.1| iron-sulfur subunit of succinate dehydrogenase [Ascaris suum] Length = 282 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 138/238 (57%), Positives = 180/238 (75%), Gaps = 4/238 (1%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K +K + IYR+NP+ G P + + VDLD CG MVLD L+ IKN++DPTLT RRSCREG Sbjct: 33 KRIKTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREG 92 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC+ ++ +YPLPHM VIKDLV DM+ FY+Q+ SI+PW Sbjct: 93 ICGSCAMNIAGENTLACICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPW 152 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L+ + K+ QS ++++K+DGLYEC++CACCS SCPSYWWN+D+YLGPA+L+QAY Sbjct: 153 LQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKYLGPAVLMQAY 212 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK LNPA+AI +IKM+L K Sbjct: 213 RWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKMK 270 >gi|2662173|dbj|BAA23717.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase [Caenorhabditis elegans] Length = 297 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 178/240 (74%), Gaps = 4/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +K + IYR+NP+ G P + + VDLD CG M+LD L+ IKN++DPTLT R Sbjct: 44 KTKKTGNRIKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFR 103 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K D + +YPLPHM V+KDLV DM+ FY+Q+ Sbjct: 104 RSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQY 163 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 SI+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWWN+D+YLGPA Sbjct: 164 ASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPA 223 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK LNPAKAI +IK +L Sbjct: 224 VLMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLL 283 >gi|226945046|ref|YP_002800119.1| succinate dehydrogenase iron-sulfur subunit [Azotobacter vinelandii DJ] gi|226719973|gb|ACO79144.1| succinate dehydrogenase iron-sulfur subunit [Azotobacter vinelandii DJ] Length = 233 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 120/230 (52%), Positives = 161/230 (70%), Gaps = 3/230 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +YR+NP+ P M +D+D MVLD L IK + D + + RRSCREG+CGS Sbjct: 2 QVSVYRYNPEQDSAPYMQNLNIDIDGKDLMVLDVLALIK-ERDGSFSYRRSCREGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 GMN++G N LAC+ + + + + PLP + +I+DLVVDMS FY Q+ ++P+L+ Sbjct: 61 GMNLNGKNGLACITPLSSVVKEGKLIIRPLPGLPIIRDLVVDMSTFYKQYEKVQPYLQNN 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P PA E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L DS Sbjct: 121 TPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADS 180 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD ERL ++DPF ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 181 RDTKTQERLAAMDDPFSVFRCRGIMNCVYVCPKGLNPTKAIGHVRDMLLR 230 >gi|89573817|gb|ABD77134.1| succinate dehydrogenase complex subunit B [Rattus norvegicus] Length = 232 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 143/219 (65%), Positives = 173/219 (78%), Gaps = 4/219 (1%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 14 PRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 73 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + G + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 74 ICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 133 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 134 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 193 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 RW+IDSRDEF ERL L+DPF LYRCHTIMNCTQ+CPK Sbjct: 194 RWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPK 232 >gi|300113366|ref|YP_003759941.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus watsonii C-113] gi|299539303|gb|ADJ27620.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosococcus watsonii C-113] Length = 231 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 116/230 (50%), Positives = 161/230 (70%), Gaps = 1/230 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +RIYR+NP+ P M Y + M+LD L I+ D +L RRSC EG+CGS G Sbjct: 3 FRIYRYNPETDTKPYMQDYELIKIQPDMMLLDALEKIQA-QDESLAFRRSCGEGVCGSDG 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + +K +A++PLP VI+DLVVD+S FY Q+R+++PWL P Sbjct: 62 MNINGRNGLACITPLASLKEPVALHPLPGRPVIRDLVVDLSQFYQQYRAVKPWLIRKDPM 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P E LQS E+R+++DGLYEC++CACCST+CPS+WWN +++ GPA LL A R++ D+RD+ Sbjct: 122 PEVEFLQSPEERKQLDGLYECILCACCSTACPSWWWNPEKFRGPAALLWANRFIADNRDQ 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERL L+D ++L+RCHTIMNCT CPK L+PA+AI+ IK ++ I Sbjct: 182 ATEERLSELDDAYKLFRCHTIMNCTDVCPKNLHPAEAISLIKHQMMKDSI 231 >gi|156934783|ref|YP_001438699.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533037|gb|ABU77863.1| hypothetical protein ESA_02623 [Cronobacter sakazakii ATCC BAA-894] Length = 238 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEQEEGRDMMLLDALMLLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + K I + PLP + VI+DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETNARLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|149374987|ref|ZP_01892760.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter algicola DG893] gi|149360876|gb|EDM49327.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter algicola DG893] Length = 234 Score = 238 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M +D+ +++ +L + + DP++ RRSCREG+CGS G Sbjct: 3 VSLYRYNPETDNAPYMQDVELDIPEGKDLMVLDVLNLVKEQDPSMAYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + + + + PLP + VI+DLVVDMS FY Q+ + P+L + Sbjct: 63 MNMNGKNGLACITPLSEVLKNNKLVLRPLPGLPVIRDLVVDMSLFYKQYEKVMPYLVNDN 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E QS EDR+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L DSR Sbjct: 123 PAPAIERYQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D Q ERL NL+DPF ++RC IMNC CPKGLNP +AI I+ +LL R Sbjct: 183 DTAQEERLANLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIRNLLLQRA 233 >gi|313768526|ref|YP_004062201.1| SdhB [Gracilariopsis andersonii] gi|312844653|gb|ADR03217.1| SdhB [Gracilariopsis andersonii] Length = 258 Score = 238 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 139/230 (60%), Positives = 172/230 (74%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + K RIYRWNP P + Y + L+NCGPMVLD L+ IK+ D TLT RRSCR Sbjct: 15 SNKTTQKYLRIYRWNPSLYNKPWFNIYPISLNNCGPMVLDALIQIKDTQDSTLTFRRSCR 74 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNI+G NTLAC+K + + I +YPLPHM VIKDL+ D++HFY+Q++ I+P Sbjct: 75 EGICGSCSMNINGINTLACLKSLNTKEMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKP 134 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 WL + P KE LQS DR +++GLYEC++CACCS SCPSYWWN D+YLGPAILLQAYR Sbjct: 135 WLINLKNIPVKEYLQSTSDRHELNGLYECILCACCSASCPSYWWNHDKYLGPAILLQAYR 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 W++DSRD F RL+ L RL+RCHTIMNC+++CPK LNP KAIA IK Sbjct: 195 WIVDSRDAFTNNRLNFLNHKMRLFRCHTIMNCSKTCPKSLNPGKAIALIK 244 >gi|227114762|ref|ZP_03828418.1| succinate dehydrogenase iron-sulfur subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 238 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETQPRLDDLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLHR 236 >gi|50120299|ref|YP_049466.1| succinate dehydrogenase iron-sulfur subunit [Pectobacterium atrosepticum SCRI1043] gi|49610825|emb|CAG74270.1| succinate dehydrogenase iron-sulfur protein [Pectobacterium atrosepticum SCRI1043] Length = 238 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 124/234 (52%), Positives = 160/234 (68%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 3 VEFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 63 DGVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E R K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 NNGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RLD+L+D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 183 IDSRDTETTPRLDDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLHR 236 >gi|146310883|ref|YP_001175957.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter sp. 638] gi|145317759|gb|ABP59906.1| succinate dehydrogenase subunit B [Enterobacter sp. 638] Length = 238 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 120/233 (51%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ +YR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSVYRYNPDVDDAPHMQDYVLEAEEGRDMMLLDALMLLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GLNMNGKNGLACITPISALQRAGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RL+ L D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|330792768|ref|XP_003284459.1| succinate dehydrogenase [Dictyostelium purpureum] gi|325085602|gb|EGC39006.1| succinate dehydrogenase [Dictyostelium purpureum] Length = 283 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 138/246 (56%), Positives = 172/246 (69%), Gaps = 9/246 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A + + ++IYR+N + P + TY V+L CGPM+LD LL IKN DPTL+ RR Sbjct: 36 KAAEKKDHFVNFQIYRYNEEVGAKPYVQTYNVNLKECGPMILDALLLIKNTQDPTLSFRR 95 Query: 79 SCREGICGSCGMNIDGTNTLAC--VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SCREGICGSC MNIDG+NTLAC +I VYPLPHM V++DL+ D++HFY QH Sbjct: 96 SCREGICGSCAMNIDGSNTLACIKKTTEAIRGNSIKVYPLPHMHVVRDLIPDLTHFYEQH 155 Query: 137 RSIEPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWN---SDRY 190 +SI+PWL+ P LQS E+R K+DGLYEC++CACCSTSCPSYWW+ Y Sbjct: 156 KSIKPWLEPAVDAPRYNGKELLQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGY 215 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 LGPA+LLQAYRW+ DSRD +RL + ED ++Y+CHTIMNCT+ CPK LNPA AIAK Sbjct: 216 LGPAVLLQAYRWIADSRDSSTKDRLAIISEDNMKIYKCHTIMNCTRVCPKHLNPALAIAK 275 Query: 250 IKMMLL 255 IK +L Sbjct: 276 IKSLLA 281 >gi|311694411|gb|ADP97284.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [marine bacterium HP15] Length = 234 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 119/231 (51%), Positives = 158/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M V++ +++ +L + + DP++ RRSCREG+CGS G Sbjct: 3 VSLYRYNPETDNAPYMQDVDVEIPEGKDLMVLDVLNLVKERDPSMAYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ + P+L Sbjct: 63 MNMNGKNGLACITPVSQVVKGDKLVLRPLPGLPVIRDLVVDMSLFYKQYEKVMPYLINDK 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS EDRQK+DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L DSR Sbjct: 123 PAPAIERLQSPEDRQKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D Q ERL NL+DPF ++RC IMNC CPKGLNP +AI I+ +LL R Sbjct: 183 DTAQEERLANLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIRNLLLQRA 233 >gi|160872511|ref|ZP_02062643.1| succinate dehydrogenase iron-sulfur subunit [Rickettsiella grylli] gi|159121310|gb|EDP46648.1| succinate dehydrogenase iron-sulfur subunit [Rickettsiella grylli] Length = 232 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 116/231 (50%), Positives = 158/231 (68%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ IYR++P+ P M Y + + M+L L + D TLT RRSCREG+CGS Sbjct: 2 QFSIYRYDPEIDNQPYMQDYTLVIKEGHDMMLLEALEQLKEEDQTLTFRRSCREGVCGSD 61 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GMN++G NTLAC+ + ++ I + PLP VI+DLVVDM FY Q+ P+L Sbjct: 62 GMNVNGKNTLACITPLSSLRSPIVLRPLPGFPVIRDLVVDMESFYHQYEKARPYLMNAKE 121 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P KE LQS E R+K+DGLYEC++CACC+++CPSYWWN D++LGPA LL R+L+D+RD Sbjct: 122 PPVKERLQSPEQREKLDGLYECILCACCTSACPSYWWNPDKFLGPAALLWLCRFLVDNRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +RL L D FRL+RC TIMNCT CPKGLNPAKAI ++ +LL +++ Sbjct: 182 DAKDQRLAELNDLFRLFRCRTIMNCTSVCPKGLNPAKAIGHVRSVLLQKEV 232 >gi|56478028|ref|YP_159617.1| succinate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] gi|56314071|emb|CAI08716.1| succinate dehydrogenase (Iron-sulfur subunit) oxidoreductase protein [Aromatoleum aromaticum EbN1] Length = 231 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 157/228 (68%), Gaps = 1/228 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR+NP+ P M Y + + +LD L+ +K ID +L+ RRSCREG+CGS Sbjct: 3 ISIYRFNPETDAKPRMQDYDITPEAGDKKLLDALMRLK-TIDDSLSFRRSCREGVCGSDA 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LACV + +K + + PLP VI+DL+VDM+ F++ + +I+P+L Sbjct: 62 MNINGRNGLACVTSLAGLKEPVVLRPLPGFPVIRDLIVDMTQFFAHYHAIKPYLINDEVA 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P +E LQ+ E+R +++GLYEC++CACCS CPSYWWN D+++GPA LLQAYR++ DSRD Sbjct: 122 PERERLQTPEERDRLNGLYECILCACCSAFCPSYWWNPDKFIGPAGLLQAYRFISDSRDT 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ERL L+D +RLYRC TIMNCT+ CPKGL P+ AI +I++ L+ Sbjct: 182 ATAERLAYLDDVYRLYRCRTIMNCTEVCPKGLRPSHAIERIRLALVRE 229 >gi|227327544|ref|ZP_03831568.1| succinate dehydrogenase iron-sulfur subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 124/233 (53%), Positives = 160/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETTPRLDDLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLHR 236 >gi|9653242|ref|NP_062488.1| succinate:cytochrome c oxidoreductase subunit 2 [Chondrus crispus] gi|1352264|sp|P48932|DHSB_CHOCR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip gi|1334489|emb|CAA87611.1| succinate dehydrogenase, iron-sulfur subunit [Chondrus crispus] Length = 250 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 171/240 (71%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 KI K RIYRWNP+ NP + + +NCGPM+LD L+ IKN D +LT Sbjct: 9 KIITIDNSSPYQKFIRIYRWNPNLNLNPWFSIFPISTNNCGPMILDALIQIKNIQDSSLT 68 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNIDGTN+LAC++ + I +YPLPH +IKDLV D+S+FY+Q Sbjct: 69 FRRSCREGICGSCSMNIDGTNSLACLRSLNTKSNFITIYPLPHTYIIKDLVPDLSNFYAQ 128 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 ++ I+PWL KE LQS DR ++DGLYEC++CACCS SCPSYWWN D+YLGPAI Sbjct: 129 YKLIKPWLINKIGFSLKENLQSKIDRLELDGLYECILCACCSASCPSYWWNQDKYLGPAI 188 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LLQAYRW++DSRD RL+ L + RL+RCHTIMNC+++CPK LNP KAIA IK ++ Sbjct: 189 LLQAYRWIVDSRDNSTENRLNFLNNKMRLFRCHTIMNCSKTCPKSLNPGKAIASIKYRII 248 >gi|8954361|ref|NP_059350.1| succinate dehydrogenase iron-sulfur protein [Cyanidioschyzon merolae] gi|3927865|dbj|BAA34653.1| succinate dehydrogenase iron-sulfur protein [Cyanidioschyzon merolae strain 10D] Length = 265 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 140/232 (60%), Positives = 176/232 (75%), Gaps = 1/232 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +RIYRWNP NP +++Y V ++NCGP+VLD L+ IKN+ D TLT RRSCREGICGS Sbjct: 29 RVFRIYRWNPSIMKNPWINSYIVSMNNCGPIVLDALIKIKNEQDSTLTFRRSCREGICGS 88 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LKTV 146 C +NI G NTLAC+ + D I +YPLPH+ VIKDLV D+++FY+QH+SI+PW Sbjct: 89 CAINIIGKNTLACLYKLSDSSRFIHIYPLPHIYVIKDLVPDLTNFYTQHKSIQPWLQPNR 148 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 KE +QS ++R +DGLYEC++CACCS SCPSYWWN DRYLGPAILLQAYRW+IDS Sbjct: 149 DYSLQKEFIQSKQERSYLDGLYECILCACCSASCPSYWWNGDRYLGPAILLQAYRWIIDS 208 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD +RL L D +++YRCHTIMNCT++CPK LNP KAIA IK++L K Sbjct: 209 RDSATEKRLGYLNDSYKVYRCHTIMNCTKTCPKHLNPGKAIANIKILLKGEK 260 >gi|253687629|ref|YP_003016819.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754207|gb|ACT12283.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 238 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 123/233 (52%), Positives = 159/233 (68%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS + R K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQSPDQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD L+D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETKPRLDELDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLHR 236 >gi|149911922|ref|ZP_01900521.1| succinate dehydrogenase [Moritella sp. PE36] gi|149805015|gb|EDM65043.1| succinate dehydrogenase [Moritella sp. PE36] Length = 238 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 117/236 (49%), Positives = 160/236 (67%), Gaps = 4/236 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ IYR+NPD P M +++ M++ L + + D TL RRSCREG+CGS Sbjct: 3 VKFSIYRYNPDVDSKPKMKEMSLEIPEGSDMMVLDALILLKEKDATLAFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G N LAC+ + ++ I + PLP + V++DLV+DM+ FY + I+P+L T Sbjct: 63 DGVNMNGKNGLACITPLSDLNMNKTIVIRPLPGLPVVRDLVIDMTQFYDNYARIKPFLIT 122 Query: 146 VSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PA+E LQS E+R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+L Sbjct: 123 DESAIPPAREHLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 IDSRD +RL L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 183 IDSRDTATEQRLSELDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGNIKSMLLQRAV 238 >gi|119476705|ref|ZP_01617015.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [marine gamma proteobacterium HTCC2143] gi|119449961|gb|EAW31197.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [marine gamma proteobacterium HTCC2143] Length = 235 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 155/232 (66%), Gaps = 4/232 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR+NP+ P M VD MVLD L +K D + RRSCREG+CG Sbjct: 1 MLNVSIYRYNPETDSEPYMQDVEVDTGGKDLMVLDVLELMKA-ADTSTVYRRSCREGVCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S GMNI+G N LAC+ + + + + PLP + V++DLVVDM FY Q+ + P+L Sbjct: 60 SDGMNINGKNGLACITPLSETLDGGNKLVLRPLPGLPVVRDLVVDMGLFYKQYEKVTPFL 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P PA E LQS E+R+K+DGLYEC++CACCST+CPS+WWN DR++GP+ LLQAYR+L Sbjct: 120 MNNTPAPAIERLQSPEEREKLDGLYECILCACCSTACPSFWWNPDRFIGPSGLLQAYRFL 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRD +RL +L+DPF ++RCH I NC CPKGLNP KAI I+ MLL Sbjct: 180 ADSRDTGTDKRLADLDDPFSVFRCHGIQNCVSVCPKGLNPTKAIGHIRNMLL 231 >gi|261822344|ref|YP_003260450.1| succinate dehydrogenase iron-sulfur subunit [Pectobacterium wasabiae WPP163] gi|261606357|gb|ACX88843.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium wasabiae WPP163] Length = 238 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 125/233 (53%), Positives = 161/233 (69%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-K 144 G+N++G N LAC+ + + K I + PLP + V++DLVVDM FY+Q+ I+P+L Sbjct: 64 GVNMNGKNGLACITPVSALQRGKSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC+MCACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F ++RCH IMNC CPKGLNP KAI IK MLL R Sbjct: 184 DSRDTETTPRLDDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLHR 236 >gi|313768500|ref|YP_004062176.1| SdhB [Gracilariophila oryzoides] gi|312844627|gb|ADR03192.1| SdhB [Gracilariophila oryzoides] Length = 250 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 139/230 (60%), Positives = 171/230 (74%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + K RIYRWNP P + Y + L CGPMVLD L+ IK+ D TLT RRSCR Sbjct: 15 SNKSIQKYLRIYRWNPLLYKKPWFNIYPISLKTCGPMVLDALIQIKDTQDSTLTFRRSCR 74 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNI+GTNTLAC+K + + I +YPLPHM VIKDL+ D++HFY+Q++ I+P Sbjct: 75 EGICGSCSMNINGTNTLACLKSLNTREMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKP 134 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 WL P KE LQS DR +++GLYEC++CACCS SCPSYWWN D+YLGPAILLQAYR Sbjct: 135 WLINKKNLPTKEYLQSTNDRYELNGLYECILCACCSASCPSYWWNHDKYLGPAILLQAYR 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 W++DSRD F +RL+ L RL+RCHTIMNC+++CPK LNP KAIA IK Sbjct: 195 WIVDSRDAFTNKRLNFLNHKMRLFRCHTIMNCSKTCPKSLNPGKAIALIK 244 >gi|1352265|sp|P48933|DHSB_CYACA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip gi|758172|emb|CAA88766.1| subunit of succinate dehydrogenase (iron sulfur protein) [Cyanidium caldarium] Length = 262 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 137/232 (59%), Positives = 180/232 (77%), Gaps = 1/232 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +LK +I+RW+ K +P TY V L NCGP+VLD L+ IKN+ D T++ RRSCREGI Sbjct: 18 SDLKLIKIFRWDSSEKKDPWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGI 77 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC +NI+GTN+LAC++ + I VYPLPH+ V+KDLVVD+++FY+Q+R I+PWL+ Sbjct: 78 CGSCAININGTNSLACLQKLNIKNNIIYVYPLPHIFVLKDLVVDLTNFYAQYRLIQPWLQ 137 Query: 145 TV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + K KE+ QS +DR +DGLYEC++CACCS SCPSYWWN D+YLGPA+LLQAYRW+ Sbjct: 138 SSLNIKSKKEIYQSKQDRLYLDGLYECILCACCSASCPSYWWNHDKYLGPAVLLQAYRWI 197 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +DSRD+ RL +L+D ++LYRCHTIMNCT++CPK LNP K IA IK LL Sbjct: 198 VDSRDDNTLSRLLSLKDSYKLYRCHTIMNCTKTCPKHLNPGKVIASIKKRLL 249 >gi|328783910|ref|XP_623566.2| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [Apis mellifera] Length = 249 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 140/225 (62%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 N E LK + +YRWNPD P M Y VDL+ CGPMVLD L+ IKN+IDPTLT R Sbjct: 24 NQNASEAKLKSFAVYRWNPDKPDEKPYMQEYKVDLNTCGPMVLDALIKIKNEIDPTLTFR 83 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI GTNTLAC K ++ +YPLPHM ++KDLV D+++FY+Q+ Sbjct: 84 RSCREGICGSCAMNIGGTNTLACISKIDTNLNSTSKIYPLPHMYIVKDLVPDLNNFYNQY 143 Query: 137 RSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SI+PWL+ K K+ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 144 KSIQPWLQRGDAKETGAKQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 203 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 +L+QAYRW+IDSRD ERL L DP+ +YRCHTIMNCT++CPK Sbjct: 204 VLMQAYRWIIDSRDSKAKERLAKLRDPYSVYRCHTIMNCTRTCPK 248 >gi|53723280|ref|YP_112265.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei K96243] gi|67641829|ref|ZP_00440595.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|76819207|ref|YP_336553.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 1710b] gi|121597494|ref|YP_990618.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei SAVP1] gi|167002176|ref|ZP_02267966.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei PRL-20] gi|167725342|ref|ZP_02408578.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei DM98] gi|167821466|ref|ZP_02453146.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 91] gi|167829814|ref|ZP_02461285.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 9] gi|167899911|ref|ZP_02487312.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 7894] gi|167908229|ref|ZP_02495434.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei NCTC 13177] gi|167916567|ref|ZP_02503658.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 112] gi|167924423|ref|ZP_02511514.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei BCC215] gi|254192566|ref|ZP_04899005.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei S13] gi|254264969|ref|ZP_04955834.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1710a] gi|52213694|emb|CAH39748.1| succinate dehydrogenase iron-sulfur protein [Burkholderia pseudomallei K96243] gi|76583680|gb|ABA53154.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia pseudomallei 1710b] gi|121225292|gb|ABM48823.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei SAVP1] gi|169649324|gb|EDS82017.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei S13] gi|238522821|gb|EEP86263.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|243062079|gb|EES44265.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei PRL-20] gi|254215971|gb|EET05356.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1710a] Length = 235 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 4 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 62 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 63 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 123 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 183 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 235 >gi|254182505|ref|ZP_04889099.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1655] gi|184213040|gb|EDU10083.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1655] Length = 235 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 4 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 62 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 63 SDAMNINGRNGLACVTSMQTLPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 123 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFIGPAGLLQAYRFIVDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 183 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 235 >gi|167744265|ref|ZP_02417039.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 14] Length = 235 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 4 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 62 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 63 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 123 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFIGPAGLLQAYRFIVDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 183 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 235 >gi|217424374|ref|ZP_03455873.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 576] gi|217392839|gb|EEC32862.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 576] Length = 237 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 6 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 65 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 125 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFIGPAGLLQAYRFIVDS 184 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 185 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 237 >gi|53716085|ref|YP_106517.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei ATCC 23344] gi|124383037|ref|YP_001025109.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei NCTC 10229] gi|126442611|ref|YP_001064169.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 668] gi|126445717|ref|YP_001079456.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia mallei NCTC 10247] gi|226199264|ref|ZP_03794824.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei Pakistan 9] gi|237507880|ref|ZP_04520595.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|254176034|ref|ZP_04882692.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 10399] gi|254187062|ref|ZP_04893577.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei Pasteur 52237] gi|254203525|ref|ZP_04909886.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei FMH] gi|254205401|ref|ZP_04911754.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei JHU] gi|254296551|ref|ZP_04964007.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 406e] gi|52422055|gb|AAU45625.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 23344] gi|126222102|gb|ABN85607.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 668] gi|126238571|gb|ABO01683.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei NCTC 10247] gi|147745764|gb|EDK52843.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei FMH] gi|147754987|gb|EDK62051.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei JHU] gi|157806418|gb|EDO83588.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 406e] gi|157934745|gb|EDO90415.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei Pasteur 52237] gi|160697076|gb|EDP87046.1| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei ATCC 10399] gi|225928671|gb|EEH24698.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei Pakistan 9] gi|235000085|gb|EEP49509.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|261827100|gb|ABM99692.2| succinate dehydrogenase, iron-sulfur protein [Burkholderia mallei NCTC 10229] Length = 237 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 6 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 65 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 125 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDS 184 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 185 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 237 >gi|124805779|ref|XP_001350535.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium falciparum 3D7] gi|6694863|gb|AAF25442.1|AF217618_1 succinate dehydrogenase iron-sulfur subunit [Plasmodium falciparum] gi|23496659|gb|AAN36215.1|AE014846_14 iron-sulfur subunit of succinate dehydrogenase [Plasmodium falciparum 3D7] gi|1510135|dbj|BAA13120.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium falciparum] Length = 321 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 139/235 (59%), Positives = 180/235 (76%), Gaps = 3/235 (1%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 K K++ I+R+NP NK P M+T+ VD+DNCGPMVLD L+ IK++ID TL+ RRSCREGI Sbjct: 65 KRKKKFSIFRYNPTNKKRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGI 124 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPW- 142 CGSC MNI+G N LAC+ ++ K I + PLP++ V+KDLV D+++FY+Q++SI+PW Sbjct: 125 CGSCAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWL 184 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSYWWN + YLGPA L+QAYR Sbjct: 185 KRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYR 244 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 W++DSRDE+ ERL + D +LYRCH IMNCT CPKGL+PAKAI +K ++ + Sbjct: 245 WIVDSRDEYTKERLMEVNDTMKLYRCHGIMNCTMCCPKGLDPAKAIKDMKNLVQE 299 >gi|326932228|ref|XP_003212222.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like isoform 2 [Meleagris gallopavo] Length = 223 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 144/217 (66%), Positives = 173/217 (79%), Gaps = 3/217 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREGICGSC MNI G NTLAC K + Sbjct: 1 MQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKI 60 Query: 105 KDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA--KELLQSHEDR 161 I +YPLPHM V+KDLV D+S+FY+Q++SIEP+LK ++ LQS EDR Sbjct: 61 DPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDR 120 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 QK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD++ ERL L+DP Sbjct: 121 QKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDP 180 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 F LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 181 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 217 >gi|325119243|emb|CBZ54797.1| Succinate dehydrogenase iron-sulfur subunit,related [Neospora caninum Liverpool] Length = 339 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 135/273 (49%), Positives = 172/273 (63%), Gaps = 42/273 (15%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 ++ + IYR+NP+ P M Y +D+ CGPMVLD L+ IK++ DPTL RRSCREGICG Sbjct: 39 VRTFAIYRYNPETDKRPYMQKYELDVSTCGPMVLDALIAIKDRQDPTLVFRRSCREGICG 98 Query: 87 SCGMNIDGTNTLACVKD----------------------------------------MKD 106 SC MN+DG N LAC+ ++ Sbjct: 99 SCAMNVDGKNCLACLTPIQRAERENEAMRLMPGQDIKHDRHEEEVVSRVTDKINHALFRE 158 Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQKI 164 + + PLPHM V++DLV DM++FY+Q+RS+EPWLK + K LQS EDR+K+ Sbjct: 159 ANPPVEILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKRKTAKKDPNVENLQSIEDRKKL 218 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 DG+YEC++CACCSTSCPSYWWN YLGPA+L+QA+RW+ DSRDEF ERL + D +L Sbjct: 219 DGMYECILCACCSTSCPSYWWNPQAYLGPAVLMQAFRWIADSRDEFTEERLAAINDTMKL 278 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 YRCH IMNCT SCPKGLNPA AI K+K + R Sbjct: 279 YRCHGIMNCTVSCPKGLNPAGAIKKMKDQVEAR 311 >gi|119615235|gb|EAW94829.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_b [Homo sapiens] Length = 223 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 142/217 (65%), Positives = 175/217 (80%), Gaps = 3/217 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREGICGSC MNI+G NTLAC + + Sbjct: 1 MQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 60 Query: 105 KDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDR 161 + +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK + ++ LQS E+R Sbjct: 61 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEER 120 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F ERL L+DP Sbjct: 121 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 180 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 F LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 181 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 217 >gi|167851277|ref|ZP_02476785.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei B7210] Length = 235 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 4 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 62 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 63 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYYSVRPYLVNE 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 123 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 183 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 235 >gi|66826409|ref|XP_646559.1| succinate dehydrogenase [Dictyostelium discoideum AX4] gi|74858368|sp|Q55CC2|DHSB_DICDI RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|60474473|gb|EAL72410.1| succinate dehydrogenase [Dictyostelium discoideum AX4] Length = 287 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 139/246 (56%), Positives = 178/246 (72%), Gaps = 9/246 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + + +++YR+N + P + TY ++L +CGPMVLD LL IKN IDPTL+ RR Sbjct: 40 KTAEKKDHFVNFQVYRYNEETTAKPYIQTYNINLKDCGPMVLDALLLIKNNIDPTLSFRR 99 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SCREGICGSC MN++G+NTLAC K + D + VYPLPHM V++DL+ D+SHFY+QH Sbjct: 100 SCREGICGSCAMNLNGSNTLACTKKITDCLSGDTVKVYPLPHMHVVRDLIPDLSHFYTQH 159 Query: 137 RSIEPWLKTV---SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN---SDRY 190 +SI+PWL+ KE+LQS E+R K+DGLYEC++CACCSTSCPSYWW+ Y Sbjct: 160 KSIKPWLEPAVDVPRYNGKEILQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGY 219 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 LGPA+LLQAYRW+ DSRD Q +RL L ED ++Y+CHTIMNCT CPKGLNP K+IA Sbjct: 220 LGPAVLLQAYRWIADSRDSIQKDRLAILSEDQMKVYKCHTIMNCTAVCPKGLNPGKSIAN 279 Query: 250 IKMMLL 255 IK +L Sbjct: 280 IKYLLA 285 >gi|126456558|ref|YP_001077078.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia pseudomallei 1106a] gi|242312419|ref|ZP_04811436.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1106b] gi|126230326|gb|ABN93739.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1106a] gi|242135658|gb|EES22061.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 1106b] Length = 237 Score = 235 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 6 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 65 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYYSVRPYLVNE 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 125 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDS 184 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 185 RDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGLNPARAIGQIRTMLARRAV 237 >gi|46122465|ref|XP_385786.1| hypothetical protein FG05610.1 [Gibberella zeae PH-1] Length = 260 Score = 235 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 126/239 (52%), Positives = 165/239 (69%), Gaps = 19/239 (7%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A E LK ++IYRWNPD P + TY +DL+ GPM+LD L+ IKN++DPTLT R Sbjct: 36 PAKEPESKLKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIKNELDPTLTFR 95 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSC+ + + + +YPLPH V+KDLV D++HFY Q++ Sbjct: 96 RSCQ-----------------YPGRIPTEAASDVKIYPLPHTYVVKDLVPDLTHFYKQYK 138 Query: 138 SIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SI+P+L+ +P + +E Q+ EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAIL Sbjct: 139 SIKPYLQRDTPAEDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 198 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LQ+YRWL DSRD+ ER NLE+ LYRCHTI+NCT++CPKGLNP KAIA+IK + Sbjct: 199 LQSYRWLADSRDQRTAERKQNLENSMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 257 >gi|126668310|ref|ZP_01739269.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] gi|126627227|gb|EAZ97865.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] Length = 234 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 158/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M V+L +++ +L + + D TL+ RRSCREG+CGS G Sbjct: 3 VSLYRYNPEADNAPFMQDIEVELPKGRDLMVLDVLNLLKEKDVTLSYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + + + PLP + VI+DLVVDMS FY Q+ + P+L Sbjct: 63 MNMNGKNGLACITPVSQVIKKDKLVLRPLPGLPVIRDLVVDMSLFYKQYEKVMPYLVNDQ 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQ+ EDR+K+DGLYEC++CACCST+CPS+WWN D+++GPA LLQAYR+L DSR Sbjct: 123 PAPAIERLQTPEDREKLDGLYECILCACCSTACPSFWWNPDKFIGPAGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D Q ERL +L+DPF ++RC IMNC CPKGLNP +AI I+ +LL R Sbjct: 183 DTAQAERLADLDDPFSVFRCRGIMNCVSVCPKGLNPTRAIGHIRNLLLQRA 233 >gi|237843099|ref|XP_002370847.1| iron-sulfur subunit of succinate dehydrogenase, putative [Toxoplasma gondii ME49] gi|211968511|gb|EEB03707.1| iron-sulfur subunit of succinate dehydrogenase, putative [Toxoplasma gondii ME49] gi|221482163|gb|EEE20524.1| iron-sulfur subunit of succinate dehydrogenase, putative [Toxoplasma gondii GT1] gi|221502458|gb|EEE28185.1| iron-sulfur subunit of succinate dehydrogenase, putative [Toxoplasma gondii VEG] Length = 342 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 134/275 (48%), Positives = 173/275 (62%), Gaps = 42/275 (15%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + + IYR+NP+ P M + +D+ CGPM+LD L+ IK++ DP+L RRSCREGI Sbjct: 40 PDFRTFAIYRYNPETDKRPYMQKFELDVSTCGPMILDALIAIKDRQDPSLVFRRSCREGI 99 Query: 85 CGSCGMNIDGTNTLACVKDMKDI------------------------------------- 107 CGSC MN+DG N LAC+ +K Sbjct: 100 CGSCAMNVDGKNCLACLTPIKRGDRENEAMRLMPGQDIKHDRHEEEVVSRVTDKINHALF 159 Query: 108 ---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQ 162 + + PLPHM V++DLV DM++FY+Q+RS+EPWLK +PK LQS EDR+ Sbjct: 160 REANPPVEILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKRKTPKKDPNVENLQSIEDRR 219 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 K+DG+YEC++CACCSTSCPSYWWN YLGPA+L+QA+RW+ DSRDEF ERL + D Sbjct: 220 KLDGMYECILCACCSTSCPSYWWNPQAYLGPAVLMQAFRWIADSRDEFTEERLAAINDTM 279 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +LYRCH IMNCT SCPKGLNPA AI K+K + R Sbjct: 280 KLYRCHGIMNCTVSCPKGLNPAGAIQKMKDQVEAR 314 >gi|270157619|ref|ZP_06186276.1| succinate dehydrogenase iron-sulfur subunit [Legionella longbeachae D-4968] gi|289164008|ref|YP_003454146.1| succinate dehydrogenase, iron sulfur protein [Legionella longbeachae NSW150] gi|269989644|gb|EEZ95898.1| succinate dehydrogenase iron-sulfur subunit [Legionella longbeachae D-4968] gi|288857181|emb|CBJ10999.1| succinate dehydrogenase, iron sulfur protein [Legionella longbeachae NSW150] Length = 232 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 107/229 (46%), Positives = 155/229 (67%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NP+ P + Y +D+ M++ L + + D TL R SCREG+CGS G Sbjct: 3 FSIYRYNPETDTKPYIKDYDLDIPPDSNMMVLDALQLIREKDETLAFRASCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + + I + PL +VI+DLVVD + F+ Q+ ++P+L+ + Sbjct: 63 MNINGLNRLACITSISSLTPPIVIRPLISFTVIRDLVVDFTLFFKQYERVKPYLQNDNEP 122 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P KE LQ+ E+R K+DGLYEC++CACC+++CPS WWN ++++GPA LL A R+L DSRD Sbjct: 123 PLKERLQTPEERAKLDGLYECILCACCTSNCPSSWWNPEKFIGPAGLLSANRFLQDSRDT 182 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +RL +L+DPF +YRC TIMNCT CPK LNPA+AIA I+ ++ + Sbjct: 183 ATEQRLADLQDPFSVYRCRTIMNCTVVCPKHLNPAEAIADIRRLMTKKG 231 >gi|226941335|ref|YP_002796409.1| SdhB [Laribacter hongkongensis HLHK9] gi|226716262|gb|ACO75400.1| SdhB [Laribacter hongkongensis HLHK9] Length = 319 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 119/211 (56%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + +YR+NP+ P M V++D+ +LD L+ +K +D +L+ RRSCREGICGS Sbjct: 6 FSLYRYNPEKDDKPYMQDIEVEVDSTDVKLLDALVKLKA-VDDSLSFRRSCREGICGSDA 64 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ D++ +K I + PLP + VI+DL+VDM+ F+ Q+ SI+P+L +P Sbjct: 65 MNINGRNGLACITDLRSLKQPITLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYLINDTPA 124 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P +E QS EDR+K+DGLYEC++CACCSTSCPS+WWN D+Y+GPA LL AYR++IDSRDE Sbjct: 125 PDRERYQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKYVGPAGLLAAYRFIIDSRDE 184 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ERLDNL DP+RL+RCHTIMNCT CPKG Sbjct: 185 ATSERLDNLNDPYRLFRCHTIMNCTDVCPKG 215 >gi|327398310|ref|YP_004339179.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hippea maritima DSM 10411] gi|327180939|gb|AEA33120.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hippea maritima DSM 10411] Length = 240 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 161/235 (68%), Gaps = 2/235 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + ++I+R++P+ P Y V + G MVLDGL IK + DPTLT RRSCREG+ Sbjct: 6 GDKVIFKIFRYDPEKDKAPYFKDYEVTITRKGMMVLDGLNQIKWEQDPTLTYRRSCREGV 65 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGS GMNI+G NT++C+ ++D + + PLP VIKDLV D F++++ +++P+L Sbjct: 66 CGSDGMNINGMNTVSCMSHIEDYNSDVLVIKPLPGFPVIKDLVCDFEDFFNKYYAVKPYL 125 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P P +E LQS EDR K++GLYEC++C CC++SCPSYW + D YLGP+ LL A R++ Sbjct: 126 VEKYPPPGRERLQSIEDRNKLNGLYECILCGCCTSSCPSYWADPD-YLGPSALLNAARFV 184 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D+RDE ERLD + + ++RCHTI+NC +CPK LNP KAIA ++ +L RK Sbjct: 185 VDTRDEGSDERLDIVNNIHGVWRCHTILNCIHACPKELNPTKAIASLQKEILKRK 239 >gi|82594137|ref|XP_725298.1| succinate dehydrogenase iron-sulfur subunit [Plasmodium yoelii yoelii str. 17XNL] gi|23480252|gb|EAA16863.1| succinate dehydrogenase iron-sulfur subunit [Plasmodium yoelii yoelii] Length = 321 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 133/238 (55%), Positives = 179/238 (75%), Gaps = 3/238 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + LK + I+R++ N P M T+ VD+DNCGPMVLD L+ IK++ID TL+ RRSCR Sbjct: 55 DQKNELKRFSIFRYDSQNNKRPRMQTFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCR 114 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNI+G N LAC+ ++ K I ++PLP++ ++KDLV D+++FY+Q++SI+ Sbjct: 115 EGICGSCAMNINGKNGLACLTEVNKNKNEITEIHPLPNLYIMKDLVADLTNFYNQYKSID 174 Query: 141 PW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSYWWN + YLGPA L+Q Sbjct: 175 PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQ 234 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 AYRW++D+RDE+ ERL ++ D +LYRCH IMNC+ CPKGL+PAKAI +K ++ + Sbjct: 235 AYRWIVDTRDEYTQERLMDVNDTMKLYRCHGIMNCSVCCPKGLDPAKAIKHMKELVQE 292 >gi|134281852|ref|ZP_01768559.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 305] gi|134246914|gb|EBA47001.1| succinate dehydrogenase and fumarate reductase family iron-sulfur protein [Burkholderia pseudomallei 305] Length = 237 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 117/233 (50%), Positives = 166/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + IYR++PD+ P M Y + M+LD L +K D TL+ RRSCREG+CG Sbjct: 6 TRILDIYRYDPDDGRAPRMQRYELAPRAEDRMLLDVLGRVKA-QDETLSYRRSCREGVCG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LACV M+ + I + PLP + V++DL+VDM+ F++Q+ S+ P+L Sbjct: 65 SDAMNINGRNGLACVTSMQALPREIVLRPLPGLPVVRDLIVDMTSFFNQYHSVRPYLVNE 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQ+ ++R+++DGLYEC++CACCS++CPSYWWN D+++GPA LLQAYR+++DS Sbjct: 125 GVPPERERLQTPQEREQLDGLYECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDS 184 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RLD+LEDP+RL+RC TI+NC CPKGLNPA+AI +I+ ML R + Sbjct: 185 RDDASAARLDDLEDPYRLFRCRTIVNCVDVCPKGLNPARAIGQIRTMLARRAV 237 >gi|217968586|ref|YP_002353820.1| succinate dehydrogenase iron-sulfur subunit [Thauera sp. MZ1T] gi|217505913|gb|ACK52924.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thauera sp. MZ1T] Length = 231 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 116/228 (50%), Positives = 159/228 (69%), Gaps = 1/228 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 IYR++P+ P M Y V + +LD L+ ++ D +L+ RRSCREG+CGS Sbjct: 3 LNIYRYDPERGDPPRMQAYDVQPEAGDKKLLDLLMRLRV-QDDSLSFRRSCREGVCGSDA 61 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MNI+G N LAC+ + +K I + PLP VI+DLVVDM+ F++ + SI PWL P Sbjct: 62 MNINGRNGLACLTALDGLKEPIVLRPLPGFPVIRDLVVDMTQFFAHYHSIRPWLINDEPL 121 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P +E LQ+ +R+++DGLYEC++CACCS CPSYWWN D+++GP+ LLQAYR++ DSRD Sbjct: 122 PERERLQTPPERERLDGLYECILCACCSAFCPSYWWNPDKFIGPSGLLQAYRFIADSRDT 181 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ERLD L+D +RLYRC TIMNCT+ CPKGL+P+ AI +I++ LL R Sbjct: 182 ASAERLDFLDDVYRLYRCRTIMNCTEVCPKGLSPSHAIERIRLALLQR 229 >gi|68073031|ref|XP_678430.1| iron-sulfur subunit of succinate dehydrogenase, [Plasmodium berghei strain ANKA] gi|56498895|emb|CAH97283.1| iron-sulfur subunit of succinate dehydrogenase, putative [Plasmodium berghei] Length = 321 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 133/236 (56%), Positives = 179/236 (75%), Gaps = 3/236 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + LK + I+R++ N P M T+ VD+DNCGPMVLD L+ IK++ID TL+ RRSCREG Sbjct: 57 KNELKRFSIFRYDSQNNKRPRMQTFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREG 116 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G N LAC+ ++ K I ++PLP++ ++KDLV D+++FY+Q++SI+PW Sbjct: 117 ICGSCAMNINGKNGLACLTEVNKDKKEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPW 176 Query: 143 --LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSYWWN + YLGPA L+QAY Sbjct: 177 LKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAY 236 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RW++D+RDE+ ERL ++ D +LYRCH IMNC+ CPKGL+PAKAI +K ++ + Sbjct: 237 RWIVDTRDEYTQERLMDINDTMKLYRCHGIMNCSVCCPKGLDPAKAIKHMKELVQE 292 >gi|89573845|gb|ABD77148.1| succinate dehydrogenase complex subunit B [Bos taurus] Length = 231 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 136/218 (62%), Positives = 170/218 (77%), Gaps = 4/218 (1%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + ++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 14 PRIMKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREG 73 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 74 ICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 133 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAY Sbjct: 134 LKKKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAY 193 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 RW+IDSRD+F ERL L+DPF LYRCHTIMNCT++CP Sbjct: 194 RWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCP 231 >gi|70947835|ref|XP_743495.1| iron-sulfur subunit of succinate dehydrogenase, [Plasmodium chabaudi chabaudi] gi|56523019|emb|CAH82158.1| iron-sulfur subunit of succinate dehydrogenase, putative [Plasmodium chabaudi chabaudi] Length = 321 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 133/241 (55%), Positives = 180/241 (74%), Gaps = 3/241 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + + LK + I+R++ N P M T+ VD+DNCGPMVLD L+ IK++ID TL+ RR Sbjct: 52 SDQAQKNELKRFSIFRYDSQNNKRPRMQTFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRR 111 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNI+G N LAC+ ++ K I ++PLP++ ++KDLV D+++FY+Q++ Sbjct: 112 SCREGICGSCAMNINGKNGLACLTEVNKNKNEITEIHPLPNLYIMKDLVADLTNFYNQYK 171 Query: 138 SIEPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 SI+PW KT K KE QS EDR+K+DGLYEC+MCA CSTSCPSYWWN + YLGPA Sbjct: 172 SIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPAT 231 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+QAYRW++D+RDE+ ERL ++ D +LYRCH IMNC+ CPKGL+PAKAI +K ++ Sbjct: 232 LMQAYRWIVDTRDEYTQERLMDMNDTMKLYRCHGIMNCSVCCPKGLDPAKAIKHMKELVQ 291 Query: 256 D 256 + Sbjct: 292 E 292 >gi|313673223|ref|YP_004051334.1| succinate dehydrogenase subunit b [Calditerrivibrio nitroreducens DSM 19672] gi|312939979|gb|ADR19171.1| succinate dehydrogenase subunit B [Calditerrivibrio nitroreducens DSM 19672] Length = 238 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 161/237 (67%), Gaps = 2/237 (0%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + I+R++P+ P TY V++ G ++L+GL +K ++DPTL+ RRSCRE Sbjct: 2 STNKFVTFEIFRYDPEKDKEPYYQTYKVEIRRSGMLLLEGLNQVKWELDPTLSFRRSCRE 61 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 G+CGS G+N++G N L+C+ ++D+ I + PLP M VI+DLV D+ F+ + +++P Sbjct: 62 GVCGSDGLNVNGVNMLSCMTKIEDLGTDHIVIQPLPGMKVIRDLVTDVDDFFQKFITVKP 121 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L SP P KE QS EDR+ +DGLYEC++C CCS+SCPSYW ++YLGP L+AYR Sbjct: 122 YLIRKSPAPDKEFYQSPEDRKLLDGLYECILCGCCSSSCPSYWA-DEKYLGPNAFLRAYR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +LIDSRDE +RL L D ++RCHTI NC ++CPK LNP KAI I+ MLL+R Sbjct: 181 YLIDSRDEGAEDRLPILNDKHGVWRCHTIYNCVEACPKQLNPTKAIVGIRRMLLERG 237 >gi|56460610|ref|YP_155891.1| succinate dehydrogenase iron-sulfur subunit [Idiomarina loihiensis L2TR] gi|56179620|gb|AAV82342.1| Succinate dehydrogenase/fumarate reductase Fe-S protein [Idiomarina loihiensis L2TR] Length = 237 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 126/234 (53%), Positives = 164/234 (70%), Gaps = 4/234 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNC-GPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +YR+NPD P M Y +++++ MVL+ L+ +K + DP+L RRSCREG+CGS Sbjct: 5 TFSVYRYNPDVDNAPHMKEYTLEVEDNQDLMVLEALIKLK-EQDPSLAFRRSCREGVCGS 63 Query: 88 CGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 GMNI+G N LAC+ + I + PLP + VI+DL+VDMS FY Q+ I+P+L Sbjct: 64 DGMNINGKNGLACITHLSSLKSDKIVIRPLPGLPVIRDLIVDMSQFYQQYEKIKPYLIND 123 Query: 147 S-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 PA+E LQS EDR K+DGLYEC++CACCS+SCPS+WWN D+++GPA LL AYR+LID Sbjct: 124 DKTPPARERLQSPEDRAKLDGLYECILCACCSSSCPSFWWNPDKFVGPAGLLHAYRFLID 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERLD L+D F ++RCH IMNC CPKGLNP KAI IK MLL R + Sbjct: 184 SRDTATDERLDELDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSMLLSRAV 237 >gi|328874315|gb|EGG22681.1| succinate dehydrogenase [Dictyostelium fasciculatum] Length = 281 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 129/244 (52%), Positives = 173/244 (70%), Gaps = 9/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + ++IYR++ ++ P + TY ++L CGPM+LD +++IKN DPTLT RRSCR Sbjct: 37 ENKDRVVSFKIYRYSEESGKKPYVQTYNLNLKECGPMILDAIIHIKNTQDPTLTFRRSCR 96 Query: 82 EGICGSCGMNIDGTNTLAC--VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 EGICGSC MNI G+NTLAC ++++YPLPHM V++DLV D++HFY QH+SI Sbjct: 97 EGICGSCAMNITGSNTLACTKKTTDSIDGNSVSIYPLPHMHVVRDLVPDLTHFYQQHKSI 156 Query: 140 EPWLKTVSPKPAKELLQSHE---DRQKIDGLYECVMCACCSTSCPSYWWN---SDRYLGP 193 PWL+ + P + + DR K+DGLYEC++CACCSTSCPSYWW+ YLGP Sbjct: 157 RPWLEPAANAPRYNGKELLQSKGDRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGP 216 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A+LLQAYRW+ DSRD Q RL++L D ++Y+CHTI+NCT+ CPKGLNPA AI+KIK Sbjct: 217 AVLLQAYRWIADSRDSIQKSRLESLSTDDLKVYKCHTILNCTRVCPKGLNPALAISKIKS 276 Query: 253 MLLD 256 +L Sbjct: 277 LLAK 280 >gi|289641515|ref|ZP_06473678.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia symbiont of Datisca glomerata] gi|289508725|gb|EFD29661.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia symbiont of Datisca glomerata] Length = 254 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 91/238 (38%), Positives = 143/238 (60%), Gaps = 2/238 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 T + +I R+NP+ ++ V +LD L Y+K +D +L+ RRSC Sbjct: 19 TSDGRTITLKIRRYNPEESDKAYWQSFAVPFVPSD-RLLDALHYVKWNLDGSLSFRRSCA 77 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 G+CGS M I+G N LAC +KD+ I++ P+ + V KDL+V+M F+ R+++P Sbjct: 78 HGVCGSDAMRINGANRLACKVLVKDLGSEISIEPIKGLPVEKDLIVNMEPFFDAFRAVKP 137 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L +P KE LQS DR++ D +C++CA C+TSCP +W + D Y GPA ++ A+R Sbjct: 138 YLIPEGHEPTKERLQSAADRERFDDTTKCILCAACTTSCPVFWNDGD-YFGPAAIVAAHR 196 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ DSRD ERL+ L + ++RC T NC+ +CP+G+ KAIA++K L+ R+I Sbjct: 197 FIFDSRDAASDERLEILNEREGVWRCRTTFNCSNACPRGIQVTKAIAEVKRALIFRRI 254 >gi|302902798|ref|XP_003048721.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729655|gb|EEU43008.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 257 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 125/236 (52%), Positives = 166/236 (70%), Gaps = 22/236 (9%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + N+K ++IYRWNPD P + TY +DL+ GPM+LD L+ IKN++DPT+T RRSC Sbjct: 39 EPKPNMKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIKNELDPTVTFRRSC 98 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 R + + + +YPLPH V+KDLV D++HFY Q++SI+ Sbjct: 99 R--------------------RIPAESSSDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIK 138 Query: 141 PWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P+L+ +P + +E Q+ EDR+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ+ Sbjct: 139 PYLQRDTPAEDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQS 198 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YRWL DSRDE ER +NLE+ LYRCHTI+NCT++CPKGLNP KAIA+IK + Sbjct: 199 YRWLADSRDERTAERKNNLENSMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 254 >gi|304415181|ref|ZP_07395896.1| succinate dehydrogenase FeS subunit [Candidatus Regiella insecticola LSR1] gi|304282963|gb|EFL91411.1| succinate dehydrogenase FeS subunit [Candidatus Regiella insecticola LSR1] Length = 238 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 117/233 (50%), Positives = 154/233 (66%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M ++ M+L L + DPTL RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDATLEAPEGRDMMLLDALIQLKEKDPTLAFRRSCREGVCGSD 63 Query: 89 GMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G+N++G + ++ + I + PLP + V++DLVVDM+ FY+Q+ I+P+L Sbjct: 64 GLNMNGKKWPRLHYPLINLDKKRQKIVIRPLPGLPVVRDLVVDMAQFYTQYEKIKPYLLN 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQS E R K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 DGKNPPAREYLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRD RLD+L+D F +RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 184 DSRDTETESRLDDLDDAFSAFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 >gi|89095250|ref|ZP_01168172.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Oceanospirillum sp. MED92] gi|89080504|gb|EAR59754.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Oceanospirillum sp. MED92] Length = 234 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +YR+NP+ P M ++D+ +++ LL + DP++ RRSCREG+CGS G Sbjct: 3 VSVYRYNPETDDAPYMQDIHIDIPGGKDIMVLDLLQLLKDKDPSMAYRRSCREGVCGSDG 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MN++G N LAC+ + + + PLP + VI+DLVVDM+ FY + I+P+L + Sbjct: 63 MNMNGLNGLACITPLSAVVKDDKLVLRPLPGLPVIRDLVVDMTQFYKAYEKIKPFLINDT 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA E LQS EDR ++DGLYEC++CACCSTSCPS+WWN D+++GP+ LLQAYR+L DSR Sbjct: 123 PPPAIERLQSPEDRAELDGLYECILCACCSTSCPSFWWNPDKFIGPSGLLQAYRFLADSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL +L+DPF ++RCH IMNC CPKGLNP KAI KI+ MLL + Sbjct: 183 DTATSERLADLDDPFSVFRCHGIMNCVNVCPKGLNPTKAIGKIRNMLLSQA 233 >gi|134291237|ref|YP_001115006.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia vietnamiensis G4] gi|134134426|gb|ABO58751.1| succinate dehydrogenase subunit B [Burkholderia vietnamiensis G4] Length = 237 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 125/234 (53%), Positives = 168/234 (71%), Gaps = 3/234 (1%) Query: 28 KEYRIYRWNPDNKGNP--CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + IYR++PD + M Y +D+ M+LD L +K D TL+ RRSCREGIC Sbjct: 5 RTLHIYRYDPDPDPDAAPYMQRYEIDVSADDRMLLDVLGRLK-HDDETLSYRRSCREGIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS MNI+G N LAC+ +MK + I + PLP + V++DL+VDM+ F++Q+ SI P+ Sbjct: 64 GSDAMNINGKNGLACLTNMKTLPREIVLRPLPGLPVVRDLIVDMTDFFNQYHSIRPYQIN 123 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + P +E LQ+ E+R ++DGLYEC++CACCSTSCPSYWWN D+++GPA LLQAYR++ D Sbjct: 124 DTTPPERERLQTPEERDQLDGLYECILCACCSTSCPSYWWNPDKFVGPAGLLQAYRFIAD 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD ERLDNLEDP+RL+RC TIMNCT CPKGLNP KAI++I+ ML+ R + Sbjct: 184 SRDMATAERLDNLEDPYRLFRCRTIMNCTDVCPKGLNPTKAISEIRTMLVRRTV 237 >gi|91083269|ref|XP_974251.1| PREDICTED: similar to succinate dehydrogenase complex subunit B [Tribolium castaneum] gi|270008235|gb|EFA04683.1| hypothetical protein TcasGA2_TC014418 [Tribolium castaneum] Length = 295 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 129/248 (52%), Positives = 164/248 (66%), Gaps = 6/248 (2%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 K LK++ IYR+ ++K P M Y +DL++CGPM+LD LL IK + D T+T Sbjct: 38 KSAPPAPKSPRLKDFSIYRFTKESKKKPHMQKYTIDLNDCGPMILDALLKIKREQDSTIT 97 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREG+CGSC MNI+G N LAC K ++ KG +YPLPHM V+KDLVVDM+ F Q Sbjct: 98 FRRSCREGVCGSCAMNINGRNALACTKRIEP-KGDCKIYPLPHMYVVKDLVVDMTRFLDQ 156 Query: 136 HRSIEPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS---DRY 190 H+ I+P+ K+ LQS +DR K+DG EC++CACCSTSCP YWW+ + + Sbjct: 157 HKRIKPYLIRNHDVAIGQKQYLQSLKDRDKLDGYIECILCACCSTSCPEYWWHGHGDNDF 216 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA LL RW+ DSRDE RL L D F +YRCH+I NCT CPK LNPAKAIA + Sbjct: 217 LGPAALLAVDRWIRDSRDEAAECRLATLRDYFSVYRCHSIFNCTSCCPKHLNPAKAIAHL 276 Query: 251 KMMLLDRK 258 +M L +K Sbjct: 277 RMRLAGKK 284 >gi|291279086|ref|YP_003495921.1| succinate dehydrogenase iron-sulfur protein [Deferribacter desulfuricans SSM1] gi|290753788|dbj|BAI80165.1| succinate dehydrogenase, iron-sulfur protein [Deferribacter desulfuricans SSM1] Length = 236 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 112/234 (47%), Positives = 162/234 (69%), Gaps = 2/234 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + I+R++P+ P TY V++ G ++L+GL IK + DPTL RRSCREG+ Sbjct: 2 SRYVTFEIFRYDPEKDKEPYYQTYKVEIRRPGMLMLEGLNQIKWEQDPTLAFRRSCREGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGS G+N++G N L+C+ ++D+ + + PLP M V++DLVVD++ F+ + +++P+L Sbjct: 62 CGSDGINVNGVNMLSCITKIEDLGTDHLVIQPLPGMPVMRDLVVDVTDFFEKFITVKPYL 121 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 SP P KE QS EDR+K+DGLYEC++C CCS+SCPSYW + + YLGP L+A+R+L Sbjct: 122 IRKSPTPDKEFYQSPEDRKKLDGLYECILCGCCSSSCPSYWADKN-YLGPNAFLRAWRYL 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRDE ERL L D ++RCHTI NC ++CPK LNP KAI +I+ ML++R Sbjct: 181 ADSRDEGADERLPILNDKHGVWRCHTIYNCVEACPKELNPTKAIVEIRRMLMNR 234 >gi|150368|gb|AAA88331.1| ORF2 [Neisseria gonorrhoeae] Length = 241 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 114/231 (49%), Positives = 161/231 (69%), Gaps = 3/231 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + IYR+NPD P M Y ++L+ +LD L+ +K D TL+ RRSCREGICG G Sbjct: 13 FEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA-QDDTLSFRRSCREGICGPDG 71 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 MNI+G N LAC+ D++ +K + + PLP + VI+DL+VDM+ F+ Q+ S++P++ +P Sbjct: 72 MNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSVKPYVVNDNPI 131 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 KE LQ+ E+R+++DGLYEC++CA S+WWN D+++GP+ LL AYR++ DSRD Sbjct: 132 GADKERLQTQEERKELDGLYECILCAVRPPV-RSFWWNPDKFVGPSGLLNAYRFIADSRD 190 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ERLDNL DP+RL+RCHTIMNC CPK LNP +AI KIK ++L R + Sbjct: 191 TITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRVV 241 >gi|302766675|ref|XP_002966758.1| hypothetical protein SELMODRAFT_86191 [Selaginella moellendorffii] gi|300166178|gb|EFJ32785.1| hypothetical protein SELMODRAFT_86191 [Selaginella moellendorffii] Length = 248 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 129/233 (55%), Positives = 172/233 (73%), Gaps = 6/233 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ +++YR+NP + +P + Y VD+ NC M+LD L IKNK D ++T RRSCREG+CG Sbjct: 16 LRSFQVYRYNPQDGKSPHLQEYKVDISNC-VMMLDVLFEIKNKHDSSITFRRSCREGVCG 74 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 SC MNI+G N LAC+ + + I V PLPHM VIKDLVVDM++FY Q++SIEPWL Sbjct: 75 SCAMNINGKNCLACLTKVDRDEDGIASTVVLPLPHMFVIKDLVVDMTYFYQQYKSIEPWL 134 Query: 144 KTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 KT + K KE LQ+ E+R K+DG++EC++CACC+TSCPSYWWN+ + GPAILLQAY+ Sbjct: 135 KTKTQKEDGQKEFLQTKEERAKLDGMWECILCACCNTSCPSYWWNTPTFPGPAILLQAYK 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DSRD+F ER++ L ++ RCHTI NC+ +CPKGLNPA+ I +IK ML Sbjct: 195 MIADSRDDFTKERVEALRGEMKIGRCHTIRNCSNACPKGLNPAEKILQIKGML 247 >gi|256389981|ref|YP_003111545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Catenulispora acidiphila DSM 44928] gi|256356207|gb|ACU69704.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Catenulispora acidiphila DSM 44928] Length = 256 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 143/235 (60%), Gaps = 4/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 RI R+NP+ P Y V D +LD L IK + D +LT RRSC G+CG Sbjct: 23 TITVRIRRYNPEVDAAPHWVDYQVTADPT-ARILDSLHKIKWEQDGSLTFRRSCAHGVCG 81 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KD+ I V P+ + V+KDLVVDM F+ +R ++P+L Sbjct: 82 SDAMRINGKNRLACKALVKDLNPTSAITVEPIQGLPVLKDLVVDMEPFFQAYRDVKPFLI 141 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +P +E +QS +DR + D +C++CA C+TSCP +W + +Y GPA ++ A+R++ Sbjct: 142 AHGNEPTRERIQSQKDRDRFDDTTKCILCAACTTSCPVFWTDG-QYFGPAAIVNAHRFIF 200 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD+ ERL+ L D ++RC T NCT++CP+G+ +AIA++K L+ R++ Sbjct: 201 DSRDDGANERLEILNDREGVWRCRTTFNCTEACPRGIQITQAIAEVKRALITRRV 255 >gi|291227290|ref|XP_002733638.1| PREDICTED: succinate dehydrogenase B-like [Saccoglossus kowalevskii] Length = 257 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 142/240 (59%), Positives = 177/240 (73%), Gaps = 4/240 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + + + +PD KG P M TY VDL+ CGPMVLD L+ IKN+ DPTLT R Sbjct: 6 RQSFSLAHRVQLPVSLQDPDKKGTKPKMVTYEVDLNKCGPMVLDALIKIKNEDDPTLTFR 65 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K + +YPLPHM +IKDLV DMS+FY+Q+ Sbjct: 66 RSCREGICGSCAMNIAGVNTLACICKIDARVNKTTKIYPLPHMYIIKDLVPDMSNFYAQY 125 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + IEP+LK K+ QS EDR K+DGLYEC++CACC+TSCPSYWWN D+YLGPA Sbjct: 126 KEIEPYLKKKETVNYGDKQYFQSVEDRAKLDGLYECILCACCTTSCPSYWWNGDKYLGPA 185 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+QAYRW+IDSRD+FQ ER+ L+DPF +YRCHTIMNCT++CPK LNP +AIA++K ++ Sbjct: 186 VLMQAYRWMIDSRDDFQVERMAKLQDPFSIYRCHTIMNCTKTCPKSLNPGRAIAEVKKLM 245 >gi|302765961|ref|XP_002966401.1| hypothetical protein SELMODRAFT_85593 [Selaginella moellendorffii] gi|302792793|ref|XP_002978162.1| hypothetical protein SELMODRAFT_417854 [Selaginella moellendorffii] gi|300154183|gb|EFJ20819.1| hypothetical protein SELMODRAFT_417854 [Selaginella moellendorffii] gi|300165821|gb|EFJ32428.1| hypothetical protein SELMODRAFT_85593 [Selaginella moellendorffii] Length = 248 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 129/233 (55%), Positives = 170/233 (72%), Gaps = 6/233 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ +++YR+NP + +P + Y VD NC M+LD L IKNK D ++T RRSCREG+CG Sbjct: 16 LRSFQVYRYNPQDGKSPHLQEYKVDTSNC-VMMLDVLFEIKNKHDSSITFRRSCREGVCG 74 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 SC MNI+G N LAC+ + + I V PLPHM VIKDLVVDM++FY Q++SIEPWL Sbjct: 75 SCAMNINGKNCLACLTKVDRDEDGIASTVVLPLPHMFVIKDLVVDMTYFYQQYKSIEPWL 134 Query: 144 KTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 KT K KE LQ+ E+R K+DG++EC++CACC+TSCPSYWWN+ + GPAILLQAY+ Sbjct: 135 KTKKQKEDGQKEFLQTKEERAKLDGMWECILCACCNTSCPSYWWNTPTFPGPAILLQAYK 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DSRD+F ER++ L ++ RCHTI NC+ +CPKGLNPA+ I +IK ML Sbjct: 195 MIADSRDDFTKERVEALRGEMKIGRCHTIRNCSNACPKGLNPAEKILQIKGML 247 >gi|152967898|ref|YP_001363682.1| succinate dehydrogenase iron-sulfur subunit [Kineococcus radiotolerans SRS30216] gi|151362415|gb|ABS05418.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kineococcus radiotolerans SRS30216] Length = 281 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 92/234 (39%), Positives = 143/234 (61%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R++P+ P ++Y + + VLD L +K +ID L RRSC G+CGS Sbjct: 50 VTVKIRRYDPEQDSEPHWESYDLIMHGTD-RVLDALHKVKWEIDGRLVFRRSCAHGVCGS 108 Query: 88 CGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +KD IK I + P+ + V KDL+VDM F++ +R + P+L T Sbjct: 109 DAMRINGRNRLACKTLLKDLDIKKPIVIEPIKGLPVEKDLIVDMEPFFAAYREVMPFLVT 168 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P +E +QS DR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ D Sbjct: 169 KGAEPTRERIQSQADRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFD 227 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD RL+ L D ++RC T NC+++CP+G+ KAIA++K L+ RK+ Sbjct: 228 SRDAASDLRLEILNDKEGVWRCRTTFNCSEACPRGIQVTKAIAEVKQALISRKV 281 >gi|86739391|ref|YP_479791.1| succinate dehydrogenase iron-sulfur subunit [Frankia sp. CcI3] gi|86566253|gb|ABD10062.1| succinate dehydrogenase subunit B [Frankia sp. CcI3] Length = 232 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +I R++P+ ++Y V D +LD ++++K +D TL RRSC G+CG Sbjct: 2 TVTLKIRRYDPETVDEAHWESYQVPFDPSD-RLLDAIMWVKWNLDGTLAFRRSCAHGVCG 60 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S M ++G N LAC +KD+ I + P+ + V KDL+VDM F+ R+++P+L T Sbjct: 61 SDAMRVNGANRLACKVLVKDLGSEITIEPIKGLPVEKDLIVDMEPFFDAFRAVKPYLITD 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR + D +C+MCA C+T+CP +W + D Y GP ++ A+R++ DS Sbjct: 121 DHEPTRERLQSTEDRARFDDTTKCIMCAACTTACPVFWTDGD-YFGPQAIVAAHRFIFDS 179 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL+ L + ++RC T NCT +CP+G+ KAI ++K LL R++ Sbjct: 180 RDSGTDERLEILNEREGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLFRRV 232 >gi|30698100|ref|NP_680465.2| SDH2-3; electron carrier/ succinate dehydrogenase [Arabidopsis thaliana] gi|75262571|sp|Q9FJP9|DHSB3_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor gi|10178178|dbj|BAB11652.1| succinate dehydrogenase iron-sulfur protein-like [Arabidopsis thaliana] gi|12049602|emb|CAC19857.1| mitochondrial succinate dehydrogenase iron-sulphur subunit [Arabidopsis thaliana] gi|332010628|gb|AED98011.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 [Arabidopsis thaliana] Length = 309 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 134/230 (58%), Positives = 172/230 (74%), Gaps = 4/230 (1%) Query: 28 KEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +++VDL +CGPMVLD L IK + D +L+ RRSCREGICG Sbjct: 67 KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126 Query: 87 SCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDGTNT+AC+K + + PLPHM VIKDLVVD+++FY Q++S+EPWLKT Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKT 186 Query: 146 VSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P +E QS +DR+K+DGLYEC++CACC+TSCPSYWWN + + GPA LLQAYRW+ Sbjct: 187 RKPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWIS 246 Query: 205 DSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 DSRDE++ ERL + + ++YRC I NCT +CPKGLNPA AI K+K Sbjct: 247 DSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKSK 296 >gi|302802851|ref|XP_002983179.1| hypothetical protein SELMODRAFT_118126 [Selaginella moellendorffii] gi|300148864|gb|EFJ15521.1| hypothetical protein SELMODRAFT_118126 [Selaginella moellendorffii] Length = 248 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 130/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ +++YR+NP + +P + Y VD NC M+LD LL IKNK D LT RRSCREG+CG Sbjct: 16 LRSFQVYRYNPQDGKSPHLQDYKVDTSNC-VMMLDVLLEIKNKHDSGLTFRRSCREGVCG 74 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW- 142 SC MNI+G N LAC+ + +G I V PLPHM VIKDLVVDM+HFY Q++SIEPW Sbjct: 75 SCAMNINGKNCLACLTKVGRDEGGIASTVVLPLPHMFVIKDLVVDMTHFYQQYKSIEPWL 134 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K +E LQS E+R K+DG++EC++CACC+TSCPSYWWN+ + GPAILLQAY+ Sbjct: 135 KTKHQKEDGQREFLQSKEERAKLDGMWECILCACCNTSCPSYWWNTPTFPGPAILLQAYK 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DSRD+F ER++ L ++ RCHTI NC+ +CPKGLNPA+ I +IK ML Sbjct: 195 MIADSRDDFAKERMEALRGEMKIGRCHTIRNCSNACPKGLNPAEKILQIKGML 247 >gi|255587559|ref|XP_002534311.1| succinate dehydrogenase, putative [Ricinus communis] gi|223525519|gb|EEF28073.1| succinate dehydrogenase, putative [Ricinus communis] Length = 313 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 141/236 (59%), Positives = 175/236 (74%), Gaps = 4/236 (1%) Query: 20 APTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 +K +KE+R+YRW+PDN P + +Y++DL +CGPMVLD L IK + D +L+ RR Sbjct: 57 QDNIKKLIKEFRVYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRR 116 Query: 79 SCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNIDGTNT+AC+K D + PLPHM VIKDLVVD+++FY+Q+R Sbjct: 117 SCREGICGSCSMNIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYR 176 Query: 138 SIEPWLK-TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEPWLK P+ +E QS DR+K+DGLYEC++CACCS SCPSYWWN + +LGPA L Sbjct: 177 SIEPWLKTRKKPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPL 236 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + AYRW+ DSRD+F ERL L ED RLYRC TI NCT +CPK LNPA AI K+K Sbjct: 237 IHAYRWISDSRDDFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMK 292 >gi|11465623|ref|NP_049294.1| succinate:cytochrome c oxidoreductase subunit 2 [Porphyra purpurea] gi|4106930|gb|AAD03097.1| succinate:cytochrome c oxidoreductase subunit 2 [Porphyra purpurea] Length = 249 Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 134/233 (57%), Positives = 169/233 (72%), Gaps = 1/233 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 NLK RIYRW P N+ + + NCGPM+LD L+ IK++ D +L RRSCR Sbjct: 15 NNNLNLKFIRIYRWTPSNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCR 74 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG NTLAC+K +K I +YPLPHM +IKDLV D+S+F+SQ++ I+P Sbjct: 75 EGICGSCSMNIDGINTLACLKPIKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKP 134 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 WL PK ++ LQS +DR +++G+YEC++CACCS SCPSYWWN D+YLGPAILLQAYR Sbjct: 135 WLINNVPKKSEY-LQSEKDRSELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYR 193 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 WL DSRD ERL L +L++CHTIMNC+++CPK LNP KAIA IK + Sbjct: 194 WLADSRDTNAKERLKLLGGKSKLFKCHTIMNCSRTCPKSLNPGKAIASIKHSI 246 >gi|297622606|ref|YP_003704040.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Truepera radiovictrix DSM 17093] gi|297163786|gb|ADI13497.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Truepera radiovictrix DSM 17093] Length = 241 Score = 228 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 2/240 (0%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 AP + RI R+NP+ P Y V VLD L IK ++D TL+ RR Sbjct: 3 TAPANLERQIRVRIKRFNPEQDKRPYWAEYNVTARTTD-RVLDVLHQIKWEMDGTLSFRR 61 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SC GICGS M I+G N LAC +KD+ I+V P+ + VIKD++VDM F+ +++ Sbjct: 62 SCAHGICGSDAMLINGVNRLACKVLVKDLGDTISVEPIRGLRVIKDMIVDMEPFFDSYKA 121 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + P+ +P P+ E QS EDR+ D +C++CA C+TSCP +W N Y+GPA ++ Sbjct: 122 VLPYFINDTPAPSGERYQSPEDREIFDATTKCILCAACTTSCPVFWANGS-YIGPAAIVN 180 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A+R++ DSRDE +RL+ L L+RC T NCT++CP+G+ +AI +K LL R+ Sbjct: 181 AHRFIFDSRDEGTADRLEVLGKANGLWRCRTAYNCTEACPRGIPVTQAIEDVKRELLWRR 240 >gi|126665811|ref|ZP_01736792.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] gi|126629745|gb|EBA00362.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] Length = 286 Score = 228 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 121/233 (51%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R+YR+NP+ P V + MVLD L ++K D TLT RRSCREG+CGS G Sbjct: 55 VRLYRYNPEQDEIPYNQDVEVGDEFRSRMVLDVLEHLK-TRDTTLTFRRSCREGVCGSDG 113 Query: 90 MNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++++G N L C+ + D K + + PLP M VI+DLVVD + F+ Q+ I+PWL T Sbjct: 114 LSMNGRNGLGCISAVADALGKKNVLEIRPLPGMPVIRDLVVDQALFFKQYERIQPWLITD 173 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P PA E LQS EDR K+DGLYEC++CACCS++CPS+WWN ++Y+GPA LLQA R+L+DS Sbjct: 174 TPNPAIERLQSPEDRAKLDGLYECILCACCSSACPSWWWNPEKYIGPAGLLQANRFLVDS 233 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L DPF ++RC I NC CPKGLNP KAI IK MLL ++ Sbjct: 234 RDTATRERLAKLGDPFSVFRCRGIGNCMAYCPKGLNPMKAIGHIKTMLLREQV 286 >gi|302812044|ref|XP_002987710.1| hypothetical protein SELMODRAFT_126628 [Selaginella moellendorffii] gi|300144602|gb|EFJ11285.1| hypothetical protein SELMODRAFT_126628 [Selaginella moellendorffii] Length = 248 Score = 228 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ +++YR+NP + +P + Y VD NC M+LD LL IKNK D +LT RRSCREG+CG Sbjct: 16 LRSFQVYRYNPQDGKSPHLQDYKVDTSNC-VMMLDVLLEIKNKHDSSLTFRRSCREGVCG 74 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW- 142 SC MNI+G N LAC+ + + I V PLPHM VIKDLVVDM+HFY Q++SIEPW Sbjct: 75 SCAMNINGKNCLACLTKVGRDEDGIASTVVLPLPHMFVIKDLVVDMTHFYQQYKSIEPWL 134 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K +E LQS E+R K+DG++EC++CACC+TSCPSYWWN+ + GPAILLQAY+ Sbjct: 135 KTKHQKEDGQREFLQSKEERAKLDGMWECILCACCNTSCPSYWWNTPTFPGPAILLQAYK 194 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DSRD+F ER++ L ++ RCHTI NC+ +CPKGLNPA+ I +IK ML Sbjct: 195 MIADSRDDFAKERMEALRGEMKIGRCHTIRNCSNTCPKGLNPAEKILQIKGML 247 >gi|1706425|sp|P80477|DHSB_PORPU RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip Length = 239 Score = 228 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 134/233 (57%), Positives = 169/233 (72%), Gaps = 1/233 (0%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 NLK RIYRW P N+ + + NCGPM+LD L+ IK++ D +L RRSCR Sbjct: 5 NNNLNLKFIRIYRWTPSNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCR 64 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICGSC MNIDG NTLAC+K +K I +YPLPHM +IKDLV D+S+F+SQ++ I+P Sbjct: 65 EGICGSCSMNIDGINTLACLKPIKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKP 124 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 WL PK ++ LQS +DR +++G+YEC++CACCS SCPSYWWN D+YLGPAILLQAYR Sbjct: 125 WLINNVPKKSEY-LQSEKDRSELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYR 183 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 WL DSRD ERL L +L++CHTIMNC+++CPK LNP KAIA IK + Sbjct: 184 WLADSRDTNAKERLKLLGGKSKLFKCHTIMNCSRTCPKSLNPGKAIASIKHSI 236 >gi|126666280|ref|ZP_01737259.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] gi|126629081|gb|EAZ99699.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] Length = 286 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R+YR+NP+ P V + MVLD L ++K D TLT RRSCREG+CGS G Sbjct: 55 VRLYRYNPEQDEIPYNQDVEVGDEFRSRMVLDVLEHLK-TRDTTLTFRRSCREGVCGSDG 113 Query: 90 MNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++++G N L C+ + D K + + PLP M VI+DLVVD + F+ Q+ I+PWL T Sbjct: 114 LSMNGRNGLGCISAVADALGKKNVLEIRPLPGMPVIRDLVVDQALFFKQYERIQPWLITD 173 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P PA E LQS EDR K+DGLYEC++CACCS++CPS+WWN ++Y+GPA LLQA R+L+DS Sbjct: 174 TPNPAIERLQSPEDRAKLDGLYECILCACCSSACPSWWWNPEKYIGPAGLLQANRFLVDS 233 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD ERL L DPF ++RC I NC CPKGLNP KAI IK MLL +I Sbjct: 234 RDTATRERLAKLGDPFSVFRCRGIGNCMAYCPKGLNPMKAIGHIKTMLLREQI 286 >gi|319779728|ref|YP_004130641.1| Succinate dehydrogenase iron-sulfur protein [Taylorella equigenitalis MCE9] gi|317109752|gb|ADU92498.1| Succinate dehydrogenase iron-sulfur protein [Taylorella equigenitalis MCE9] Length = 215 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 124/215 (57%), Positives = 166/215 (77%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M V+L M+LD L+ IKN +D + ++RRSCREG+CGS MNI+G N LAC+ ++ Sbjct: 1 MQKLDVELGPNDKMLLDALVRIKNDVDDSFSIRRSCREGVCGSDAMNINGKNGLACITNL 60 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 +D+K I + PLP + VI+DL+VDM+ F++Q+ S++P+L P KE LQS E R+++ Sbjct: 61 RDLKEPIVLRPLPGLPVIRDLIVDMTSFFNQYHSVKPYLINEDHPPEKERLQSPEAREEL 120 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 DGLYEC++CACCSTSCPS+WWN D+++GPA LLQAYR+L DSRD+ ERLDNLEDP+RL Sbjct: 121 DGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFLADSRDQATSERLDNLEDPYRL 180 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +RCHTIMNC CPKGLNP+KAI+KIK ML+ R + Sbjct: 181 FRCHTIMNCVDVCPKGLNPSKAISKIKEMLVRRTV 215 >gi|283458659|ref|YP_003363294.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Rothia mucilaginosa DY-18] gi|283134709|dbj|BAI65474.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Rothia mucilaginosa DY-18] Length = 289 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 7/264 (2%) Query: 1 MVEIMLPKRSRVK--RGKIWNAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGP 57 M E LP+ VK G +I R+NP+ D + + + Sbjct: 28 MAENELPEPESVKLFEGMTGGDSDSIPTYDVVIKIRRYNPEVSSEAYWDEFPLTMYRTD- 86 Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK--GAIAVYP 115 VLD L IK ++D +++ RRSC GICGS M I+G N LAC +KD+ I V P Sbjct: 87 RVLDALHKIKWEVDGSVSFRRSCAHGICGSDAMRINGRNRLACKTLLKDLDLTKPITVEP 146 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 + + KDL+VDM F+ +R I P+ S +P +E LQ+ EDR + D +C++CA Sbjct: 147 IKGLPCEKDLIVDMEPFFQAYREIMPFFINDSNEPERERLQTIEDRARFDDTTKCILCAA 206 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C++SCP +W + +Y GP+ ++ A+R++ DSRD+ RL+ L D ++RC T NCT+ Sbjct: 207 CTSSCPVFWTDG-QYFGPSAIVNAHRFIFDSRDDAGDLRLEILNDKEGVWRCRTTFNCTE 265 Query: 236 SCPKGLNPAKAIAKIKMMLLDRKI 259 +CP+G+ KAIA++K +L R + Sbjct: 266 ACPRGIQITKAIAEVKQAILSRSL 289 >gi|297797537|ref|XP_002866653.1| succinate dehydrogenase 2-3 [Arabidopsis lyrata subsp. lyrata] gi|297312488|gb|EFH42912.1| succinate dehydrogenase 2-3 [Arabidopsis lyrata subsp. lyrata] Length = 309 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 135/234 (57%), Positives = 174/234 (74%), Gaps = 4/234 (1%) Query: 24 EKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++ KE++IYRWNPD P + +++VDL +CGPMVLD L IK + D +L+ RRSCRE Sbjct: 63 KEAKKEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEEDASLSYRRSCRE 122 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNIDGTNT+AC+K + + PLPHM VIKDLVVD+++FY Q++++EP Sbjct: 123 GICGSCSMNIDGTNTVACLKPINPNSSKPTIITPLPHMYVIKDLVVDLTNFYQQYKAMEP 182 Query: 142 WLKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 WLKT P +E QS +DR+K+DGLYEC++CACC+TSCPSYWWN + + GPA LLQAY Sbjct: 183 WLKTRKPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAY 242 Query: 201 RWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RW+ DSRDEF ERL + E+ ++YRC I NCT +CPKGLNPA AI K+K Sbjct: 243 RWISDSRDEFGEERLQAITENQTKVYRCRAIKNCTATCPKGLNPASAILKMKSK 296 >gi|221632359|ref|YP_002521580.1| succinate dehydrogenase iron-sulfur protein [Thermomicrobium roseum DSM 5159] gi|221156870|gb|ACM05997.1| succinate dehydrogenase iron-sulfur protein [Thermomicrobium roseum DSM 5159] Length = 231 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 96/231 (41%), Positives = 141/231 (61%), Gaps = 3/231 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R+NP+ P Y V+++ VLD L Y+K D +LT RRSC G+CGS Sbjct: 3 VTLRIQRFNPETDTKPYYREYTVEVEPTD-RVLDALNYVKWYQDGSLTFRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +KD+ I + PL +I+DLVVDM F++Q+R++ P+L Sbjct: 62 DAMRINGRNRLACKVLIKDLGPKITIEPLLGFRIIRDLVVDMEPFFAQYRTVMPYLINEE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R D +C++CACC+++CP +W + +LGPA ++ A+R+L DSR Sbjct: 122 PPPVRERLQSPEERALYDDTTKCILCACCTSACPIFWT--NEWLGPAAIVNAHRFLFDSR 179 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL L F ++RC TI NCT++CP+G+ AI ++K +L + Sbjct: 180 DRATEERLAILNQRFGVWRCRTIFNCTEACPRGIQVTNAIEQVKRRILFEQ 230 >gi|307206434|gb|EFN84472.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Harpegnathos saltator] Length = 226 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 138/217 (63%), Positives = 174/217 (80%), Gaps = 3/217 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKD 103 M Y +DL+ CGPMVLD L+ IKN++DPTLT RRSCREGICGSC MNI+GTNTLAC K Sbjct: 1 MQKYKIDLNACGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIEGTNTLACISKI 60 Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDR 161 + + VYPLPHM ++KDLV D+++FY+Q+R+I+PWL+ K ++ LQS EDR Sbjct: 61 DTNTSTSCKVYPLPHMYIVKDLVPDLNNFYTQYRNIQPWLQRSDTKETGKQQYLQSVEDR 120 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD ERL+ L+DP Sbjct: 121 KKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDTQAKERLEKLKDP 180 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 F ++RCHTIMNCT +CPKGLNP KAIAK+K +L + Sbjct: 181 FSVFRCHTIMNCTHTCPKGLNPGKAIAKLKKLLANAA 217 >gi|258651544|ref|YP_003200700.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nakamurella multipartita DSM 44233] gi|258554769|gb|ACV77711.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nakamurella multipartita DSM 44233] Length = 265 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 98/245 (40%), Positives = 150/245 (61%), Gaps = 7/245 (2%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + +I R+NP+ P M++Y V G +L+ L YIK ID TLT RR Sbjct: 24 PIPEGAV-MLTVKIQRYNPELDDGPHMESYRVPA-QPGDRLLNVLHYIKWYIDGTLTFRR 81 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD----IKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 SC G+CGS M I+G N L C +KD + + + P+ + ++KDL+VDM F+ Sbjct: 82 SCAHGVCGSDAMRINGRNRLGCKVLVKDLIGDKRNEVTIEPIKGLPLLKDLIVDMEPFFD 141 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +R+++P+L T P +E +QS +DR + D +C++CACC+TSCP YW D Y+GPA Sbjct: 142 AYRAVKPFLITYDNPPTREYVQSSKDRDRFDDTTKCILCACCTTSCPVYWSE-DAYVGPA 200 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ A+R++ DSRD+ ERL+ L D ++RC T NCT++CP+G+ KAI ++K L Sbjct: 201 AIVNAHRFIFDSRDQGAQERLEILSDAEGVWRCRTTFNCTEACPRGIQVTKAIQEVKRAL 260 Query: 255 LDRKI 259 + R++ Sbjct: 261 MFRRV 265 >gi|255327361|ref|ZP_05368435.1| succinate dehydrogenase iron-sulfur subunit [Rothia mucilaginosa ATCC 25296] gi|255295641|gb|EET74984.1| succinate dehydrogenase iron-sulfur subunit [Rothia mucilaginosa ATCC 25296] Length = 262 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 7/264 (2%) Query: 1 MVEIMLPKRSRVK--RGKIWNAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGP 57 M E LP+ VK G +I R+NP+ D + + + Sbjct: 1 MAENELPEPESVKLFEGMTGGDSDSIPTYDVVIKIRRYNPEVSSEAYWDEFPLTMYRTD- 59 Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK--GAIAVYP 115 VLD L IK ++D +++ RRSC GICGS M I+G N LAC +KD+ I V P Sbjct: 60 RVLDALHKIKWEVDGSVSFRRSCAHGICGSDAMRINGRNRLACKTLLKDLDLTKPITVEP 119 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 + + KDL+VDM F+ +R I P+ S +P +E LQ+ EDR + D +C++CA Sbjct: 120 IKGLPCEKDLIVDMEPFFQAYREIMPFFINDSNEPERERLQTIEDRARFDDTTKCILCAA 179 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C++SCP +W + +Y GP+ ++ A+R++ DSRD+ RL+ L D ++RC T NCT+ Sbjct: 180 CTSSCPVFWTDG-QYFGPSAIVNAHRFIFDSRDDAGDLRLEILNDKEGVWRCRTTFNCTE 238 Query: 236 SCPKGLNPAKAIAKIKMMLLDRKI 259 +CP+G+ KAIA++K +L R + Sbjct: 239 ACPRGIQITKAIAEVKQAILSRSL 262 >gi|313902531|ref|ZP_07835932.1| succinate dehydrogenase subunit B [Thermaerobacter subterraneus DSM 13965] gi|313467217|gb|EFR62730.1| succinate dehydrogenase subunit B [Thermaerobacter subterraneus DSM 13965] Length = 232 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 142/228 (62%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R+NP+ P + Y ++ D VLD L +K ++D TL RRSC G+CGS Sbjct: 3 VTLRIRRYNPEQDREPHWEEYRLEADPTD-RVLDLLNRVKWEVDGTLAYRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G LAC +K++ I V P+ V KDL+VD + F++ +RSI+P+L Sbjct: 62 DAMIINGKARLACKTLVKELSQPITVEPMRGFRVKKDLIVDFTGFFAAYRSIKPYLINHD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P+P +E LQS DR++ D +C++C CC+TSCPS+W N D Y+GPA ++ A+R++ DSR Sbjct: 122 PEPERERLQSPHDRERFDDTTKCILCGCCTTSCPSFWANPD-YVGPAAIVNAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D+ ERL L ++RC TI NCT++CP+G+ +AI ++K +L Sbjct: 181 DQAADERLRILNSRDGVWRCRTIFNCTEACPRGIEVTRAIQEVKRAIL 228 >gi|311113031|ref|YP_003984253.1| succinate dehydrogenase [Rothia dentocariosa ATCC 17931] gi|310944525|gb|ADP40819.1| succinate dehydrogenase [Rothia dentocariosa ATCC 17931] Length = 262 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 13/267 (4%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGE--KNL----KEYRIYRWNPDNKGNPCMDTYYVDLDN 54 M E P+ V K++ +G N+ R+ R+NP+ D + + + Sbjct: 1 MAEHETPEPESV---KLFEGMSGSDSGNIPTYDVTIRVRRYNPEVSDKAYWDDFNLTMYR 57 Query: 55 CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIA 112 VLD L IK ++D +++ RRSC GICGS M I+G N LAC +KD I I Sbjct: 58 TD-RVLDALHKIKWELDGSVSFRRSCAHGICGSDAMRINGRNRLACKTLLKDLDITKPII 116 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V P+ + KDL+VDM F+ +R I P+ S +P +E LQS E+R + D +C++ Sbjct: 117 VEPIKGLPCEKDLIVDMEPFFQAYREIMPFFINDSNEPERERLQSAEERARFDDTTKCIL 176 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C++SCP +W + +Y GP+ ++ A+R++ DSRD+ RL+ L D ++RC T N Sbjct: 177 CAACTSSCPVFWTDG-QYFGPSAIVNAHRFIFDSRDDAGDLRLEILNDKEGVWRCRTTFN 235 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT++CP+G+ KAIA++K +L R + Sbjct: 236 CTEACPRGIQITKAIAEVKQAILARAL 262 >gi|300743790|ref|ZP_07072810.1| succinate dehydrogenase, iron-sulfur subunit [Rothia dentocariosa M567] gi|300380151|gb|EFJ76714.1| succinate dehydrogenase, iron-sulfur subunit [Rothia dentocariosa M567] Length = 287 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 13/267 (4%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGE--KNL----KEYRIYRWNPDNKGNPCMDTYYVDLDN 54 M E P+ V K++ +G N+ R+ R+NP+ D + + + Sbjct: 26 MAEHETPEPESV---KLFEGMSGSDSGNIPTYDVTIRVRRYNPEVSDKAYWDDFNLTMYR 82 Query: 55 CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIA 112 VLD L IK ++D +++ RRSC GICGS M I+G N LAC +KD I I Sbjct: 83 TD-RVLDALHKIKWELDGSVSFRRSCAHGICGSDAMRINGRNRLACKTLLKDLDITKPII 141 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V P+ + KDL+VDM F+ +R I P+ S +P +E LQS E+R + D +C++ Sbjct: 142 VEPIKGLPCEKDLIVDMEPFFQAYREIMPFFINDSNEPERERLQSAEERARFDDTTKCIL 201 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C++SCP +W + +Y GP+ ++ A+R++ DSRD+ RL+ L D ++RC T N Sbjct: 202 CAACTSSCPVFWTDG-QYFGPSAIVNAHRFIFDSRDDAGDLRLEILNDKEGVWRCRTTFN 260 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT++CP+G+ KAIA++K +L R + Sbjct: 261 CTEACPRGIQITKAIAEVKQAILARAL 287 >gi|206891198|ref|YP_002248613.1| succinate dehydrogenase iron-sulfur protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743136|gb|ACI22193.1| succinate dehydrogenase iron-sulfur protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 239 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 2/234 (0%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 ++I R+ PD + D + V L+ VLDGL+ IK +D TLT R+SC G+ Sbjct: 2 SKYYTFKIKRYLPDENPSTRWDEFRVKLN-SMERVLDGLVKIKETMDGTLTFRKSCAHGV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC M I+G N LAC +KD+ I + PLP + VIKDLVVDM+ F+ ++ + P+L Sbjct: 61 CGSCAMKINGQNRLACQTLVKDLPETIEIEPLPALPVIKDLVVDMTMFFHKNDKVLPYLI 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P P +E +QS ED+ KI C+MC C+TSCP +W YLGP+ LL+AYR+L Sbjct: 121 NDEPPPERERIQSPEDQHKILESITCIMCGSCTTSCPVFWA-DKEYLGPSALLKAYRFLF 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+RD +RL+ + ++RCH+I NC + CPK ++ K I K+K + + + Sbjct: 180 DTRDRATEQRLEAITGEHGVWRCHSIFNCVEVCPKEIDITKHILKLKRLAVKKG 233 >gi|254385211|ref|ZP_05000543.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. Mg1] gi|194344088|gb|EDX25054.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. Mg1] Length = 255 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 100/234 (42%), Positives = 145/234 (61%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ P + +++D VLDGL IK +D TLT RRSC GICG Sbjct: 23 TVTFRIRRYNPEISDEPQWQDFQIEIDPKE-RVLDGLHKIKWDLDGTLTFRRSCAHGICG 81 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 82 SDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVMKDLVVDMEPFFQAYRDVMPFLV 141 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 142 TTGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 200 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 201 DSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 254 >gi|317120970|ref|YP_004100973.1| succinate dehydrogenase subunit B [Thermaerobacter marianensis DSM 12885] gi|315590950|gb|ADU50246.1| succinate dehydrogenase subunit B [Thermaerobacter marianensis DSM 12885] Length = 232 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 142/228 (62%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R+NP++ P + Y + D VLD L +K ++D TL RRSC G+CGS Sbjct: 3 VTLRIRRYNPEHDREPHWEEYRLQADPTD-RVLDLLNRVKWEVDGTLAYRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G LAC +K++ I V P+ V KDL+VD + F++ +RSI+P+L Sbjct: 62 DAMIINGKARLACKTLVKELSQPITVEPMRGFRVKKDLIVDFTGFFAAYRSIKPYLINND 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P+P +E LQS DR++ D +C++C CC+TSCPS+W N D Y+GPA ++ A+R++ DSR Sbjct: 122 PEPERERLQSPHDRERFDDTTKCILCGCCTTSCPSFWANPD-YVGPAAIVNAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D+ ERL L ++RC TI NCT++CP+G+ +AI ++K +L Sbjct: 181 DQAADERLRILNSRDGVWRCRTIFNCTEACPRGIEVTRAIQEVKRAIL 228 >gi|291287902|ref|YP_003504718.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Denitrovibrio acetiphilus DSM 12809] gi|290885062|gb|ADD68762.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Denitrovibrio acetiphilus DSM 12809] Length = 235 Score = 225 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 111/235 (47%), Positives = 162/235 (68%), Gaps = 2/235 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + I+R++PD TY V++ G ++LD L IK + DPTLT RRSCREG+C Sbjct: 2 KTVTFEIFRYDPDKDKEAYYQTYQVEIRRPGYLMLDALNQIKWEQDPTLTYRRSCREGVC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GS G+N++G N L+C+ ++D+ I + PLP M+V++DLV D+ F+++ +++P+L Sbjct: 62 GSDGINVNGVNMLSCMTKVEDLGADHIIIQPLPGMNVMRDLVTDVDDFFNKFITVKPYLI 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 SP P KE+ QS EDR+K+DGLYEC++C CCS+SCPSYW +YLGP L+A+R+++ Sbjct: 122 RKSPNPDKEIYQSPEDRKKLDGLYECILCGCCSSSCPSYWA-DKKYLGPNAFLRAWRYIV 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE ERL L D ++RCHTI NC ++CPK LNP +AI I+ +LLD ++ Sbjct: 181 DSRDEGAEERLPMLNDKHGVWRCHTIYNCVEACPKELNPTEAIMNIRKLLLDNQV 235 >gi|256380452|ref|YP_003104112.1| succinate dehydrogenase iron-sulfur subunit [Actinosynnema mirum DSM 43827] gi|255924755|gb|ACU40266.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Actinosynnema mirum DSM 43827] Length = 260 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 101/256 (39%), Positives = 146/256 (57%), Gaps = 9/256 (3%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 S RG P G ++ R+NP+ P D++ + VL+ L Y+K Sbjct: 8 STGSRGSQPPVPDGA-ITVTLKVRRFNPEFDDEPRWDSFEIPALPSD-RVLNLLHYVKWY 65 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIK 123 ID TLT RRSC GICGS M I+G N LAC +KD I + P+ + V K Sbjct: 66 IDGTLTFRRSCAHGICGSDAMRINGVNRLACKVLLKDLMPSGGKPTTITIEPIKGLPVHK 125 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL+VDM F+ ++++P+L T +P +E +QS DR++ D +C++CACC+TSCP Y Sbjct: 126 DLLVDMEPFFEAFKAVKPYLVTYGNEPTRERIQSIADRERFDDTTKCILCACCTTSCPVY 185 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 W Y GPA ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ Sbjct: 186 WTEG-TYFGPAAIVNAHRFIFDSRDEGAEERLDILNDIDGVWRCRTTFNCTDACPRGIQV 244 Query: 244 AKAIAKIKMMLLDRKI 259 KAI ++K LL +++ Sbjct: 245 TKAIQEVKRALLFKRV 260 >gi|326500490|dbj|BAK06334.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 304 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 135/243 (55%), Positives = 172/243 (70%), Gaps = 3/243 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 +KE++IYRWNPD G P + +Y+VDL CGPMVLD L IK++ D TL RR Sbjct: 61 KRSGKPTTVKEFQIYRWNPDAHGRPFLQSYFVDLGTCGPMVLDVLQKIKSEHDSTLAFRR 120 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHR 137 SCREGICGSC MNIDG NT+AC+K + + PLPHM V+KDLVVD+++FY Q++ Sbjct: 121 SCREGICGSCSMNIDGVNTVACLKSIDTDTSTATMITPLPHMYVVKDLVVDLTNFYQQYK 180 Query: 138 SIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 SIEPWLKT +E QS +R+K+DGLYEC++CACCST+CPSYWWNS+ +LGPA L Sbjct: 181 SIEPWLKTKRGAPEGREHAQSPAERRKLDGLYECILCACCSTACPSYWWNSEDFLGPAAL 240 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L AYRW+ DSRD++ ER+ L E +LYRC I +CT +CPK L+PA AI+ +K M Sbjct: 241 LHAYRWVSDSRDDYGEERIQALSEGWDKLYRCRMIKSCTATCPKSLDPATAISALKTMHQ 300 Query: 256 DRK 258 RK Sbjct: 301 LRK 303 >gi|295396422|ref|ZP_06806584.1| succinate dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] gi|294970724|gb|EFG46637.1| succinate dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] Length = 264 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 RI R+NP+ P + Y V + + LD L IK +ID +L+ RRSC G+CGS Sbjct: 34 TIRIARFNPEADSEPHWEDYKVTMYGTDRI-LDALHKIKWEIDGSLSFRRSCAHGVCGSD 92 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KD I V + + + KDL+VDM F+ +R I P+L T Sbjct: 93 AMRINGRNRLACKTLLKDLDTNKPITVEAIKGLPLEKDLIVDMEPFFQSYREIMPFLITS 152 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR D +C++CA C++SCP +W + +Y GPA ++ A+R++ DS Sbjct: 153 GHEPTRERLQSPEDRAIFDDTTKCILCASCTSSCPVFWTDG-QYFGPAAIVNAHRFIFDS 211 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE RL+ L D ++RC T NCT++CP+G+ KAIA++K LL R Sbjct: 212 RDEGGDMRLEVLNDKEGVWRCRTTFNCTEACPRGIEVTKAIAEVKQALLTRA 263 >gi|269955787|ref|YP_003325576.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] gi|269304468|gb|ACZ30018.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] Length = 250 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 95/244 (38%), Positives = 141/244 (57%), Gaps = 6/244 (2%) Query: 19 NAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 A GE +I R+NP+ + + V+ + LD L IK + D +LT Sbjct: 8 PAKVGEVKSFTVTIKIRRFNPEVSTEATWEEFQVEAHATDRI-LDALHKIKWEQDGSLTF 66 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 RRSC GICGS M I+G N LAC +K + I V P+ + V+KDLVVDM F++ Sbjct: 67 RRSCAHGICGSDAMRINGRNRLACKTLLKDVNPDKPITVEPIKGLPVVKDLVVDMEPFFA 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +R + P+L T +P +E LQS D K D +C++CA C++SCP +W + +Y GPA Sbjct: 127 SYREVMPFLITSGNEPTRERLQSAADHAKFDDTTKCILCAACTSSCPVFWTDG-QYFGPA 185 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ A+R++ DSRDE +RLD L D ++RC T NCT++CP+G+ KAI ++K + Sbjct: 186 AIVNAHRFIFDSRDEGGQQRLDILNDKEGVWRCRTTFNCTEACPRGIQVTKAIQEVKQAM 245 Query: 255 LDRK 258 + R Sbjct: 246 IRRA 249 >gi|119945913|ref|YP_943593.1| succinate dehydrogenase catalytic subunit [Psychromonas ingrahamii 37] gi|119864517|gb|ABM03994.1| succinate dehydrogenase subunit B [Psychromonas ingrahamii 37] Length = 237 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 127/236 (53%), Positives = 167/236 (70%), Gaps = 5/236 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 ++ IYR+NPD P M +D+ + MVLD L+ +K K DPTL+ RRSCREG+CG Sbjct: 3 VKFSIYRYNPDVDNAPYMQDMSLDIAEGSDMMVLDALMTLKEK-DPTLSFRRSCREGVCG 61 Query: 87 SCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S GMN++G N LAC+ + D KG + + PLP + VI+DLV+DM+ FY+Q+ I+P+L Sbjct: 62 SDGMNMNGKNGLACITPLSDLLSKGKVILRPLPGLPVIRDLVIDMTQFYTQYEKIKPYLI 121 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P E Q+ E+R+K+DGLYEC++CACCS+SCPS+WWN D+++GPA LL AYR+L Sbjct: 122 PDDRQPPVGEYKQTPEEREKLDGLYECILCACCSSSCPSFWWNPDKFIGPAGLLAAYRFL 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 IDSRD ERL +L+D F ++RCH IMNC CPKGLNP KAI KIK MLL R I Sbjct: 182 IDSRDNATEERLADLDDAFSVFRCHNIMNCVSVCPKGLNPTKAIGKIKSMLLQRAI 237 >gi|295681178|ref|YP_003609752.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1002] gi|295441073|gb|ADG20241.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Burkholderia sp. CCGE1002] Length = 235 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 167/233 (71%), Gaps = 1/233 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L+ IYR++PD P + Y V+L M+LD L IK +D +L RRSCREGICG Sbjct: 4 LRTVDIYRYDPDADERPRLQQYEVELGPGERMLLDVLGAIKA-MDESLAYRRSCREGICG 62 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S MNI+G N LAC+ +M+++ I + PLP + VI+DL+VDM+ F++Q+ SI+PWL Sbjct: 63 SDAMNINGKNGLACLTNMQELPKHIVLRPLPGLPVIRDLIVDMTPFFNQYHSIKPWLVND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P P +E QS ++R ++DGLYEC++CACCS+SCPS+WWN D+++GPA LLQA+R++ DS Sbjct: 123 DPPPERERPQSPQERDQLDGLYECILCACCSSSCPSFWWNPDKFVGPAGLLQAFRFIADS 182 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ RL NLED +RL+RC TIMNC CPKGLNPA+AI +I+ ML R + Sbjct: 183 RDKDTAARLTNLEDAYRLFRCRTIMNCVDVCPKGLNPARAIGEIRTMLTRRTV 235 >gi|78486367|ref|YP_392292.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thiomicrospira crunogena XCL-2] gi|78364653|gb|ABB42618.1| succinate dehydrogenase subunit B [Thiomicrospira crunogena XCL-2] Length = 238 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 163/236 (69%), Gaps = 7/236 (2%) Query: 30 YRIYRWNPDNKGNPCMDTYYVD--LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + IYR+NP+ P + Y +D L M+L+ L ++ + DP LT R SC+EG+CGS Sbjct: 3 FSIYRYNPEVDAEPYLQDYELDDALIGHDMMLLEALEKLR-EQDPGLTFRSSCKEGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GMNI+G N L+C+ + ++K I + PLP + VI+DLV+DM+ FY + +++P+LK V Sbjct: 62 DGMNINGENKLSCITRVSELKQPIKIRPLPGLPVIRDLVIDMAQFYEHYHAVDPFLKPVP 121 Query: 148 PKP----AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 ELLQS E+R+K+DG YEC++C CCSTSCPS+WWN D++ GPA LL A R++ Sbjct: 122 DGVSIDLDHELLQSPEEREKLDGSYECILCGCCSTSCPSFWWNPDKFHGPAALLAAQRFV 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +DSRD +RL L+DPF+ +RC I NCT SCPKGLNP++AI ++K ++L ++I Sbjct: 182 VDSRDITTRDRLAELDDPFKTFRCRNIQNCTASCPKGLNPSQAINELKSLMLKKQI 237 >gi|15805975|ref|NP_294675.1| succinate dehydrogenase iron-sulfur subunit [Deinococcus radiodurans R1] gi|6458672|gb|AAF10524.1|AE001947_7 succinate dehydrogenase, iron-sulfur subunit [Deinococcus radiodurans R1] Length = 264 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 147/265 (55%), Gaps = 9/265 (3%) Query: 1 MVEIMLP--KRSRVKRGKIWNAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGP 57 M +I P S V+ G AP L + ++ R+NP+ TY ++ G Sbjct: 1 MTQIQTPVTSSSVVQSGATPLAPADVPMLPLKVKVLRFNPEQDKKGRWVTYDIEA-QPGD 59 Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM----KDIKGAIAV 113 ++D L IK +P+LT RRSC+ GICGS M I+G N LAC + K G I V Sbjct: 60 RLVDVLNEIKWYHEPSLTFRRSCQHGICGSDAMMINGRNRLACKTLVRDLVKGSGGEITV 119 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P+ + V +DL+VDM F+ +R+I P+ P PA E LQS +++ C++C Sbjct: 120 EPIRGLKVERDLLVDMEPFFDAYRAIMPYFINEDPAPAGERLQSEAQAERMAHSSNCILC 179 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 ACC+TSCP +W N YLGPA ++QA+R++ DSRD+ +RL+ + ++RC T NC Sbjct: 180 ACCTTSCPIFWVNGS-YLGPAAIVQAHRFIFDSRDQATQQRLNIMNQNTGVWRCRTAYNC 238 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 T++CP+ + I ++K ++ ++ Sbjct: 239 TEACPREIPITSLIEEVKRAVMFQQ 263 >gi|111220648|ref|YP_711442.1| succinate dehydrogenase iron-sulfur subunit [Frankia alni ACN14a] gi|111148180|emb|CAJ59849.1| succinate dehydrogenase, Fe-S protein [Frankia alni ACN14a] Length = 253 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 141/232 (60%), Gaps = 2/232 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +I R++P+ ++Y V D +LD ++++K +D +L RRSC G+CG Sbjct: 23 TVTLKIRRFDPEFADEARWESYQVPFDPSD-RLLDAIMWVKWNLDGSLAFRRSCAHGVCG 81 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S M ++G N LAC +KD+ I++ P+ + V KDL+VDM F+ R+++P+L T Sbjct: 82 SDAMRVNGVNRLACKVLVKDLGPEISIEPIKGLPVEKDLIVDMEPFFDAFRAVKPYLITD 141 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR + D +C+MCA C+TSCP +W + D Y GP ++ A+R++ DS Sbjct: 142 DHEPTRERLQSPEDRARFDDTTKCIMCAACTTSCPVFWNDGD-YFGPQAIVAAHRFIFDS 200 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RD ERL+ L + ++RC T NCT +CP+G+ KAI ++K LL R+ Sbjct: 201 RDAGADERLEILNEREGVWRCRTTFNCTNACPRGIQVTKAIQEVKRALLFRR 252 >gi|116669689|ref|YP_830622.1| succinate dehydrogenase iron-sulfur subunit [Arthrobacter sp. FB24] gi|116609798|gb|ABK02522.1| succinate dehydrogenase subunit B [Arthrobacter sp. FB24] Length = 260 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 93/234 (39%), Positives = 140/234 (59%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 R+ R+NP+ D + V + VLD L +K +ID +++ RRSC G+CGS Sbjct: 29 VTLRVRRYNPEVSEEATWDDFKVTMYGTD-RVLDALHKVKWEIDGSVSFRRSCAHGVCGS 87 Query: 88 CGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +KD I V P+ + V KDL+VDM F+ R + P+L Sbjct: 88 DAMRINGRNRLACKTLLKDLDTTKPITVEPIKGLPVEKDLIVDMEPFFQSFREVMPFLIN 147 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P KE LQS EDR++ D +C++CA C++SCP +W + +Y GPA ++ A+R++ D Sbjct: 148 KGHEPTKERLQSAEDRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFD 206 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD+ RL+ L D ++RC T NCT++CP+G+ +AIA++K +L RKI Sbjct: 207 SRDDAGDMRLEILNDKEGVWRCRTTFNCTEACPRGIQVTQAIAEVKQAILSRKI 260 >gi|71892108|ref|YP_277840.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796214|gb|AAZ40965.1| succinate dehydrogenase iron-sulfur protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 248 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 118/238 (49%), Positives = 157/238 (65%), Gaps = 9/238 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ IYR++P+ N CM Y ++L + M L L + DPTLT RRSCREG+CGS Sbjct: 3 IKFSIYRYHPEISKNACMKNYTLNLLHAKNMTLLDALIKLKEQDPTLTFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKD-----IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GMNI+GTN LAC+ +K + AI V PL +I+DLVVDMS F+ Q+ ++P+ Sbjct: 63 DGMNINGTNNLACITSLKQLYDSNHQNAIVVRPLSGFPIIRDLVVDMSQFFLQYERVQPF 122 Query: 143 LKTV----SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 L P+ E LQS E+R K+DG YEC++CACCS++CPS+WWN D+++GPA LL Sbjct: 123 LIHERSNQQPQFLHEHLQSPEERSKLDGSYECILCACCSSACPSFWWNPDKFIGPAGLLT 182 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 YR+L+DSRD ERL+ L+D F ++RCH IMNC CPK LNPAKAI IK +L Sbjct: 183 LYRFLMDSRDTNDQERLELLQDSFSIFRCHNIMNCVSVCPKKLNPAKAIGHIKRILAK 240 >gi|296413423|ref|XP_002836413.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630231|emb|CAZ80604.1| unnamed protein product [Tuber melanosporum] Length = 260 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 134/249 (53%), Positives = 171/249 (68%), Gaps = 24/249 (9%) Query: 11 RVKRGKIWNAPTGEK--NLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIK 67 V + A +G K N+K+++IYRWNPD P M TY +D+D GPMVLD L+ +K Sbjct: 29 SVTASQTVPAGSGSKKENIKQFQIYRWNPDTPEKKPYMQTYELDMDQTGPMVLDALIRLK 88 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 N++DPTLT RRSCREGICGSC MNI G+NTLAC+ + V Sbjct: 89 NEVDPTLTFRRSCREGICGSCAMNIQGSNTLACLCRID--------------------VS 128 Query: 128 DMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + FY Q++SI+P+L+ +P +E QS E+R+K+DGLYEC++CACCSTSCPSYWWN Sbjct: 129 NSAPFYKQYKSIKPYLQRKTPSPDGREYRQSVEERKKLDGLYECILCACCSTSCPSYWWN 188 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S YLGPA+LLQ+YRWL DSRDE +G R LE+ LYRCHTIMNCT++CPKGLNP +A Sbjct: 189 SSDYLGPAVLLQSYRWLADSRDEAKGARKSALENEMSLYRCHTIMNCTRTCPKGLNPGRA 248 Query: 247 IAKIKMMLL 255 IA IK + Sbjct: 249 IANIKKEMA 257 >gi|209879269|ref|XP_002141075.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Cryptosporidium muris RN66] gi|209556681|gb|EEA06726.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, putative [Cryptosporidium muris RN66] Length = 319 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 128/241 (53%), Positives = 168/241 (69%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + L +RI ++NP NK P + Y + ++ GPMVL+GL++IKNK+D TL R+SCR Sbjct: 59 KEDTKLITFRILKYNPINKDLPRIVEYKLKINEAGPMVLNGLIHIKNKVDSTLGFRKSCR 118 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNI+G N+LAC+ + I + PLP+ +IKDL+ DM++FY+Q++SI+ Sbjct: 119 EGICGSCAMNINGKNSLACLTKISSFSDGIIELRPLPNQYIIKDLIPDMTNFYNQYKSIK 178 Query: 141 PW-------LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 PW + E LQS EDR+K+D LYEC++CACCSTSCPSYWWN D YLGP Sbjct: 179 PWLIQSNGKHNLDTTGKKIENLQSIEDRKKLDSLYECILCACCSTSCPSYWWNPDYYLGP 238 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A LLQAYRW+ DSRD+ + +RL L D +LYRCH I NCT +CPKGLNPA AI+ IK Sbjct: 239 AALLQAYRWISDSRDDSKLQRLMYLNDTMKLYRCHEIFNCTSACPKGLNPASAISNIKTE 298 Query: 254 L 254 + Sbjct: 299 I 299 >gi|297158119|gb|ADI07831.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces bingchenggensis BCW-1] Length = 257 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 147/234 (62%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + + +D+D VLDGL IK +D TLT RRSC GICG Sbjct: 25 TVTFRIRRFNPEVAADAFWEDFQIDIDPKE-RVLDGLHKIKWDLDGTLTFRRSCAHGICG 83 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I + + ++V+KDLVVDM F+ +R + P+L Sbjct: 84 SDAMRINGRNRLACKTLIKDINPEKPITIEAIKGLTVLKDLVVDMDPFFQAYRDVMPFLI 143 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 144 TTGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 202 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT++CP+G+ KAI ++K L+ R+ Sbjct: 203 DSRDEGGEQRLEILNDKDGVWRCRTTFNCTEACPRGIEVTKAIQEVKRALITRR 256 >gi|300782780|ref|YP_003763071.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] gi|299792294|gb|ADJ42669.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] Length = 256 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 95/246 (38%), Positives = 144/246 (58%), Gaps = 8/246 (3%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + +I R+NP+ P ++Y V +L+ L Y+K+ ID T + RRS Sbjct: 13 SDEHTPITVTLKILRFNPEVDSEPHWESYDVPAQRTD-RLLNLLFYVKDYIDGTFSFRRS 71 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFY 133 C G+CGS M I+G N LAC MKD + I + P+ ++ +KDL VDM F+ Sbjct: 72 CAHGVCGSDAMQINGINRLACKVLMKDLLAKDGKQTTITIAPIKGLTTLKDLYVDMDPFF 131 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +R+I+P+L T +P +E +QS DR + D +C++CACC++SCP YW + Y GP Sbjct: 132 EAYRAIKPYLITYGNEPTRERIQSQADRDRFDDTTKCILCACCTSSCPVYWNDGS-YFGP 190 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 191 AAIVNAHRFIFDSRDEGAEERLDILNDGEGVWRCRTTFNCTDACPRGIQVTKAIQEVKRA 250 Query: 254 LLDRKI 259 LL +++ Sbjct: 251 LLFKRV 256 >gi|307331947|ref|ZP_07611042.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] gi|306882421|gb|EFN13512.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] Length = 257 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 98/234 (41%), Positives = 147/234 (62%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + +D+D VLDGL +K ++D TLT RRSC GICG Sbjct: 25 TVTFRIRRFNPEVSDQAVWEDFQIDMDPKE-RVLDGLHKVKWELDGTLTFRRSCAHGICG 83 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDL+VDM F+ +R + P+L Sbjct: 84 SDAMRINGRNRLACKTLIKDINPEKPITVEAIKGLTVLKDLIVDMEPFFQAYRDVMPFLI 143 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 144 TTGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 202 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT++CP+G+ KAI ++K L+ R+ Sbjct: 203 DSRDEGGEQRLEILNDKDGVWRCRTTFNCTEACPRGIEVTKAIQEVKRALITRR 256 >gi|126642745|ref|YP_001085729.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii ATCC 17978] gi|322509190|gb|ADX04644.1| sdhB [Acinetobacter baumannii 1656-2] gi|323519218|gb|ADX93599.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter baumannii TCDC-AB0715] Length = 214 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 1/214 (0%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M T+ ++L + M+LD LL +K D TLT RRSCREGICGS G+NI+G N LAC++++ Sbjct: 1 MQTFKLELTDKHRMLLDALLALKV-QDETLTFRRSCREGICGSDGVNINGKNGLACLQNL 59 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L P P KE LQS E+R+ + Sbjct: 60 NDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINNQPAPPKERLQSPEEREHL 119 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDSRD ERL L+DPF L Sbjct: 120 NGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDSRDTATAERLARLDDPFSL 179 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 180 FRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 213 >gi|254226093|ref|ZP_04919691.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae V51] gi|125621405|gb|EAZ49741.1| succinate dehydrogenase, iron-sulfur protein [Vibrio cholerae V51] Length = 222 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 150/220 (68%), Gaps = 2/220 (0%) Query: 42 NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACV 101 P M Y ++++ M++ L + + DP++ RRSCREG+CGS G+N++G N LAC+ Sbjct: 3 KPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVCGSDGLNMNGKNGLACI 62 Query: 102 KD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHE 159 I + PLP + V++DL+VDM+ FY + ++P+L P++E LQS E Sbjct: 63 TPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDALPPSRENLQSPE 122 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +DGLYEC+MCACC+TSCPS+WWN D+++GPA LL AYRWLIDSRD ERL NL+ Sbjct: 123 ERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDSRDTATDERLSNLD 182 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D F ++RCH IMNC CPKGLNP KAI IK ML++R + Sbjct: 183 DAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 222 >gi|257054604|ref|YP_003132436.1| succinate dehydrogenase subunit B [Saccharomonospora viridis DSM 43017] gi|256584476|gb|ACU95609.1| succinate dehydrogenase subunit B [Saccharomonospora viridis DSM 43017] Length = 262 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 98/249 (39%), Positives = 140/249 (56%), Gaps = 12/249 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 AP G + +I R+NP+ P ++Y V VL+ L IKN +D TL RR Sbjct: 16 PAPEGSVTI-TVKILRFNPETDTEPHWESYDVPALPTD-RVLNLLFNIKNYVDGTLAFRR 73 Query: 79 SCREGICGSCGMNIDGTNTLACV---------KDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 SC GICGS M I+G N LAC K + V P+ + +KDL VDM Sbjct: 74 SCAHGICGSDAMQINGINRLACKVLVKDLIGKKSKDGKPPVVTVAPIKGLPTLKDLYVDM 133 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F+ +R+++P+L +P +E LQS DR++ D +C++CA C++SCP YW + Sbjct: 134 EPFFEAYRAVKPYLIAYGNEPTRERLQSPADRERFDDTTKCILCAACTSSCPVYWADGS- 192 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y GPA ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI + Sbjct: 193 YFGPAAIVNAHRFIFDSRDEGAEERLDILNDAEGVWRCRTTFNCTDACPRGIQVTKAIQE 252 Query: 250 IKMMLLDRK 258 +K LL R+ Sbjct: 253 VKRALLFRR 261 >gi|256371130|ref|YP_003108954.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007714|gb|ACU53281.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidimicrobium ferrooxidans DSM 10331] Length = 248 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 90/227 (39%), Positives = 135/227 (59%), Gaps = 2/227 (0%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I R++P+ P ++Y V VL L +K +D +L+ RRSC G+CGS M Sbjct: 23 IRRFDPEADSRPRWESYTVRQKPTD-TVLAALHTVKWTLDGSLSFRRSCAHGVCGSDAML 81 Query: 92 IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 I+G N L+CV +KD+ + + P+ + V+KDLVVDM F++Q+R + PWL Sbjct: 82 INGENRLSCVTLIKDVGTELRIEPVRGLPVVKDLVVDMEPFFAQYRQVMPWLVNDDDPGF 141 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 +E QS E+R + D +C++C CSTSCP YW D YLGPA ++ A+R++ DSRD Sbjct: 142 RERRQSPEERARFDDTTKCILCGACSTSCPVYWAGGD-YLGPAAIVAAHRFIFDSRDRAA 200 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ERLD L ++RC T NCTQ+CP+G+ +AI ++K ++ + Sbjct: 201 AERLDILNQRGGVWRCRTSFNCTQACPRGIAVTEAIEEVKRAIVSDR 247 >gi|302524157|ref|ZP_07276499.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. AA4] gi|302433052|gb|EFL04868.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. AA4] Length = 257 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 143/238 (60%), Gaps = 8/238 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R+NP+ P ++Y V VL+ L Y+K+ ID T + RRSC G+CGS Sbjct: 22 VTLKILRFNPEVDSEPHWESYDVPAQPTD-RVLNLLFYVKDYIDGTFSFRRSCAHGVCGS 80 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 M I+G N LAC +KD K I + P+ ++ +KDL VDM F+ +R+I+P Sbjct: 81 DAMQINGINRLACKVLLKDLLEKNGKKTEITIAPIKGLTTLKDLYVDMDPFFEAYRAIKP 140 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L T +P +E +QS DR + D +C++CACC++SCP YW + Y GPA ++ A+R Sbjct: 141 YLITYGNEPTRERIQSQADRNRFDDTTKCILCACCTSSCPVYWNDGS-YFGPAAIVNAHR 199 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K LL +++ Sbjct: 200 FIFDSRDEGAEERLDILNDGEGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLFKRV 257 >gi|119961009|ref|YP_947028.1| succinate dehydrogenase iron-sulfur subunit [Arthrobacter aurescens TC1] gi|119947868|gb|ABM06779.1| succinate dehydrogenase, iron-sulfur subunit [Arthrobacter aurescens TC1] Length = 260 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 15/265 (5%) Query: 1 MVE----IMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG 56 M E I LP S G+I R+ R++P+ D Y + + Sbjct: 5 MAEPASKIELPA-SVAGDGEI------PTFHITLRVRRYDPEISDEARWDDYKLTMYGTD 57 Query: 57 PMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIAVY 114 VLD L +K +ID +++ RRSC G+CGS M I+G N LAC +KD I V Sbjct: 58 -RVLDALHKVKWEIDGSVSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDTTKPITVE 116 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P+ + V KDL+VDM F+ R + P+L +P KE LQS EDR++ D +C++CA Sbjct: 117 PIKGLPVEKDLIVDMEPFFQSFREVMPFLINKGHEPTKERLQSVEDRERFDDTTKCILCA 176 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C++SCP +W + +Y GPA ++ A+R++ DSRD+ RL+ L D ++RC T NC+ Sbjct: 177 ACTSSCPVFWTDG-QYFGPAAIVNAHRFIFDSRDDAGDMRLEILNDKEGVWRCRTTFNCS 235 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRKI 259 ++CP+G+ +AIA++K +L RKI Sbjct: 236 EACPRGIQVTQAIAEVKQAILARKI 260 >gi|302536395|ref|ZP_07288737.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. C] gi|302445290|gb|EFL17106.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. C] Length = 252 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + +++D VLDGL IK +D TLT RRSC GICG Sbjct: 20 TVTFRIRRYNPEVSAEAEWQDFQIEIDPKE-RVLDGLHKIKWDLDGTLTFRRSCAHGICG 78 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 79 SDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVMKDLVVDMEPFFQAYRDVMPFLV 138 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 139 TKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 197 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 198 DSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 251 >gi|229821434|ref|YP_002882960.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beutenbergia cavernae DSM 12333] gi|229567347|gb|ACQ81198.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beutenbergia cavernae DSM 12333] Length = 254 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 94/235 (40%), Positives = 138/235 (58%), Gaps = 5/235 (2%) Query: 28 KEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 RI R++PD P + V +LD L IK D +LT RRSC G+CG Sbjct: 22 VTLRIERYDPDAADPKPYWQEFTVRAHGTD-RLLDALHSIKWDQDGSLTFRRSCAHGVCG 80 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KD+ I V P+ + V KDL+VDM F++ +R + P+L Sbjct: 81 SDAMRINGRNRLACKTLLKDLNPEKVITVEPIKGLPVEKDLIVDMEPFFASYREVMPFLM 140 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T P +E LQS R++ D +C++CA C+TSCP +W + +Y GPA ++ A+R++ Sbjct: 141 TTGNAPTRERLQSAAQRERYDDTTKCILCAACTTSCPVFWSDG-QYFGPAAIVNAHRFIF 199 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE +RL+ L D ++RC T NCT++CP+G+ +AIA++K +L R I Sbjct: 200 DSRDEGGQQRLEILNDKEGVWRCRTTFNCTEACPRGIQVTQAIAEVKRAILTRTI 254 >gi|302544636|ref|ZP_07296978.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces hygroscopicus ATCC 53653] gi|302462254|gb|EFL25347.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces himastatinicus ATCC 53653] Length = 257 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + +D+D VLDGL IK D TLT RRSC GICG Sbjct: 25 TVTFRIRRFNPEVAAESYWEDFQLDIDPKE-RVLDGLHKIKWDHDGTLTFRRSCAHGICG 83 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 84 SDAMRINGRNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMDPFFQAYRDVMPFLI 143 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQ+ EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 144 TTGNEPTRERLQTAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 202 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 203 DSRDEGGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 256 >gi|332671372|ref|YP_004454380.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas fimi ATCC 484] gi|332340410|gb|AEE46993.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas fimi ATCC 484] Length = 253 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 94/236 (39%), Positives = 140/236 (59%), Gaps = 7/236 (2%) Query: 28 KEYRIYRWNPDNKGN---PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 ++ R+ P + G+ P D + V VLD L +K + D +LT RRSC GI Sbjct: 19 VTLKVMRYLPADDGSAPVPHWDEFRVQAHGTD-RVLDALHKVKWEQDGSLTFRRSCAHGI 77 Query: 85 CGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGS M I+G N LAC +KD I V P+ + V+KDLVVDM F++ +R I P+ Sbjct: 78 CGSDAMRINGRNRLACKTLLKDLDPSKPITVEPIKGLPVVKDLVVDMEPFFASYREIMPF 137 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L T +P KE QS E R++ D +C++CA C++SCP +W + +Y GPA ++ A+R+ Sbjct: 138 LITTGTEPTKERRQSAEQRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRF 196 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + DSRDE +RL+ L D ++RC T NCT++CP+G+ KAI ++K ++ R Sbjct: 197 IFDSRDEGGAQRLEILNDKEGVWRCRTTFNCTEACPRGIEITKAIQEVKRAMITRA 252 >gi|284029307|ref|YP_003379238.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kribbella flavida DSM 17836] gi|283808600|gb|ADB30439.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kribbella flavida DSM 17836] Length = 234 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 96/234 (41%), Positives = 143/234 (61%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +I R+NP+ + TY V L VLD L IK + D TLT RRSC G+CGS Sbjct: 3 VKVKILRYNPEVTEDSEWVTYAVTLQPTD-RVLDALHKIKWEQDGTLTFRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +K + I V P+ + V+KDLVVDM F+ +RS+ P+L T Sbjct: 62 DAMRINGRNRLACKTLIKDLNPDREITVEPIKGLPVLKDLVVDMEPFFDAYRSVMPFLVT 121 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P++E +QS DR++ D +C++CA C+TSCP +W + +Y GP ++ A+R++ D Sbjct: 122 DGHEPSRERIQSQADRERFDDTTKCILCAACTTSCPVFWSDG-QYFGPQAIVGAHRFIFD 180 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R++ Sbjct: 181 SRDEGTEQRLEILNDSEGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALIFRRV 234 >gi|134103016|ref|YP_001108677.1| succinate dehydrogenase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|291005228|ref|ZP_06563201.1| succinate dehydrogenase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|133915639|emb|CAM05752.1| succinate dehydrogenase iron-sulfur protein [Saccharopolyspora erythraea NRRL 2338] Length = 260 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 101/245 (41%), Positives = 144/245 (58%), Gaps = 8/245 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + RI R+NP+ + ++Y V VL+ L YIK ID +LT RR Sbjct: 19 PIPEGAT-MVTVRIQRFNPEVDEDLHWESYRVPALPTD-RVLNLLHYIKWYIDGSLTFRR 76 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIK-----GAIAVYPLPHMSVIKDLVVDMSHFY 133 SC G+CGS M I+G N LAC MKD+ ++V P+ + V KDL+VDM F+ Sbjct: 77 SCAHGVCGSDAMRINGVNRLACKVLMKDLFAKSGETTLSVEPIKGLPVEKDLLVDMEPFF 136 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +R+++P+L T +P +E LQS DR + D +C++CA C+TSCP YW Y GP Sbjct: 137 EAYRAVKPYLITSGNEPTRERLQSVADRARFDDTTKCILCAACTTSCPVYWSEGS-YFGP 195 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 196 AAIVNAHRFIFDSRDEAAEERLDILNDVDGVWRCRTTFNCTDACPRGIQVTKAIQEVKRA 255 Query: 254 LLDRK 258 L+ R+ Sbjct: 256 LMFRR 260 >gi|328951125|ref|YP_004368460.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marinithermus hydrothermalis DSM 14884] gi|328451449|gb|AEB12350.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marinithermus hydrothermalis DSM 14884] Length = 232 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 139/228 (60%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R+NP+ P +TY ++ D VLD L +K +ID TL RRSC GICGS Sbjct: 3 VTLKIQRYNPEVDSQPRWETYRIEADPKD-RVLDLLHKVKWEIDGTLAFRRSCAHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC ++D+ I V P+ + V KDL+VDM F+ +++++P+L Sbjct: 62 DAMLINGKNRLACKVLVRDLGEEITVAPIRGLPVKKDLIVDMEPFFDAYKAVKPYLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R + D +C++CACC+TSCP +W N Y+GPA ++QA+R++ DSR Sbjct: 122 PPPERERLQSPEERARFDDTTKCILCACCTTSCPVFWVNG-TYIGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D+ ER L +RC T NCT++CPK + +AI ++K ++ Sbjct: 181 DQGAAERFKVLGASTGAWRCRTAYNCTEACPKEIRVTQAIQEVKRAMV 228 >gi|182436483|ref|YP_001824202.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777104|ref|ZP_08236369.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces cf. griseus XylebKG-1] gi|178464999|dbj|BAG19519.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657437|gb|EGE42283.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces cf. griseus XylebKG-1] Length = 255 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+NP+ + +++D VLD L IK +ID TLT RRSC GICGS Sbjct: 25 TFRIRRFNPEVSDEVQWQDFQIEIDPKE-RVLDALHKIKWEIDGTLTFRRSCAHGICGSD 83 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V + ++V+KDLVVDM F+ + + P+L T Sbjct: 84 AMRINGKNRLACKTLIKDINPDKPITVEAIKGLTVLKDLVVDMDPFFQAYHDVMPFLITK 143 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ DS Sbjct: 144 GNEPTRERLQSPEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFDS 202 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 203 RDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 254 >gi|325123215|gb|ADY82738.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter calcoaceticus PHEA-2] Length = 214 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 1/214 (0%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M T+ ++L + M+LD LL +K D +LT RRSCREGICGS G+NI+G N LAC+ ++ Sbjct: 1 MQTFKLELTDKHRMLLDALLALKV-QDESLTFRRSCREGICGSDGVNINGKNGLACLWNL 59 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 D+ I + PLP + V+KDLVVDM+ FY Q+ I+P+L P P KE LQS E+R+ + Sbjct: 60 NDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINNQPAPPKERLQSPEEREHL 119 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +GLYEC++CACCSTSCPS+WWN D++LGP+ LL AYR++IDSRD +RL L+DPF L Sbjct: 120 NGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDSRDTATADRLARLDDPFSL 179 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +RC IMNC CPKGLNP KAI I+ MLLD+ Sbjct: 180 FRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQA 213 >gi|107101017|ref|ZP_01364935.1| hypothetical protein PaerPA_01002047 [Pseudomonas aeruginosa PACS2] Length = 217 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 118/215 (54%), Positives = 152/215 (70%), Gaps = 4/215 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M + VD + MVLD L IK + D + RRSCREG+CGS GMNI+G N LAC+ + Sbjct: 1 MQDFQVDTNGKDVMVLDVLALIK-EQDEGFSYRRSCREGVCGSDGMNINGKNGLACITPL 59 Query: 105 KD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 G + + PLP + VI+DLVVDMS FY Q+ ++P+L+ +P PA E LQ+ E+R Sbjct: 60 SAAGLKGGKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQNDTPAPAIERLQTPEER 119 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +K+DGLYEC++CACCSTSCPS+WWN D++LGPA LLQAYR+L DSRD ERL +L+DP Sbjct: 120 EKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADSRDTKTEERLASLDDP 179 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 F ++RC IMNC CPKGLNP KAI ++ MLL Sbjct: 180 FSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQ 214 >gi|195131307|ref|XP_002010092.1| GI14882 [Drosophila mojavensis] gi|193908542|gb|EDW07409.1| GI14882 [Drosophila mojavensis] Length = 362 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 130/221 (58%), Positives = 166/221 (75%), Gaps = 6/221 (2%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + IYRW+P G P Y +DL+ CG MVLD L+ +KN++D TLT RRSCREGI Sbjct: 114 PRIKTFEIYRWHP--GGKPKTQKYQIDLNKCGTMVLDALIKVKNEMDGTLTFRRSCREGI 171 Query: 85 CGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNIDG NTLAC++ K++ +YPLPH+ V++DLV D+S FY Q+RSIEPWL Sbjct: 172 CGSCAMNIDGINTLACIQPIDKNLGKPCKIYPLPHLYVVRDLVPDLSRFYEQYRSIEPWL 231 Query: 144 KTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + LQ+ EDR +DGLYEC++CACC TSCPSYWWNSD+YLGPAIL+QA+ Sbjct: 232 QRKNANREVGKVQYLQAVEDRLLLDGLYECILCACCQTSCPSYWWNSDKYLGPAILMQAF 291 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 RW+IDSRDE +RL+ L DP++LYRCHTI+NCT +CPK L Sbjct: 292 RWVIDSRDEVTEKRLNMLTDPYKLYRCHTILNCTNTCPKNL 332 >gi|21615554|emb|CAD36476.1| succinate dehydrogenase [Rhodococcus ruber] Length = 382 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 101/246 (41%), Positives = 143/246 (58%), Gaps = 9/246 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + +I R+NP++ D++ V M L+ LLY+K +D TLT RR Sbjct: 140 PVPEGAT-MVTLKIARFNPEDGKGQHWDSFQVPALPSDRM-LNLLLYVKGYLDGTLTFRR 197 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHF 132 SC G+CGS M I+G N LAC MKD+ I V P+ + V KDLVVDM F Sbjct: 198 SCAHGVCGSDAMRINGVNRLACKILMKDMLPKDGKPVTITVEPIRGLPVEKDLVVDMEPF 257 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + R+++P+L +P +E +QS DR + D +C++CACC+TSCP YW + Y G Sbjct: 258 FDAFRAVKPFLIATGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVYWNDGS-YFG 316 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 317 PAAIVNAHRFIFDSRDEGAAERLDILNDVEGVWRCRTTFNCTDACPRGIQVTKAIQEVKR 376 Query: 253 MLLDRK 258 LL + Sbjct: 377 ALLFAR 382 >gi|295838570|ref|ZP_06825503.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp. SPB74] gi|302519504|ref|ZP_07271846.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. SPB78] gi|318061836|ref|ZP_07980557.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. SA3_actG] gi|318076430|ref|ZP_07983762.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. SA3_actF] gi|333026666|ref|ZP_08454730.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. Tu6071] gi|197697804|gb|EDY44737.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp. SPB74] gi|302428399|gb|EFL00215.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. SPB78] gi|332746518|gb|EGJ76959.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces sp. Tu6071] Length = 253 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 96/234 (41%), Positives = 142/234 (60%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 R+ R+NP+ + + + +D VLD L IK + D TLT RRSC GICG Sbjct: 21 TVTVRVRRFNPEVSADVVWQDFQLPMDPKE-RVLDALHKIKWEQDGTLTFRRSCAHGICG 79 Query: 87 SCGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +K + I V P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 80 SDAMRINGKNRLACKTLIKDLNPAKPITVEPIKGLTVLKDLVVDMDPFFQAYRDVMPFLV 139 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 140 TTGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 198 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 199 DSRDEAGSQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 252 >gi|269925900|ref|YP_003322523.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermobaculum terrenum ATCC BAA-798] gi|269789560|gb|ACZ41701.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermobaculum terrenum ATCC BAA-798] Length = 232 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L +I R+NP P TY V+ + VLD L +IK D TLT RRSC G+CG Sbjct: 2 LVTCKIRRYNPQTDQKPYYATYEVEAEPTD-RVLDVLNHIKWYQDGTLTFRRSCAHGVCG 60 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 S M I+G N LAC ++DI + + PL VI+DLVVD+ F+ ++++I P+L Sbjct: 61 SDAMRINGVNRLACKVLVRDIGQRMTIEPLLGFRVIRDLVVDLEPFFEKYKAIMPYLIND 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P +E LQS E+R+ D +C++CA C+T+CP +W N D +LGPA L+ A+R++ DS Sbjct: 121 EEPPERERLQSPEERELYDDTTKCILCAACTTACPPFWSNPD-FLGPAALVNAHRFIFDS 179 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RD+ +R+ L D ++RC T+ NCT +CP+G+ AI +IK LL Sbjct: 180 RDKGFEQRMAMLNDVDGVWRCRTVFNCTDACPRGIQVTNAIEEIKRKLL 228 >gi|254480537|ref|ZP_05093784.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [marine gamma proteobacterium HTCC2148] gi|214039120|gb|EEB79780.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [marine gamma proteobacterium HTCC2148] Length = 216 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 114/216 (52%), Positives = 148/216 (68%), Gaps = 3/216 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD- 103 M + +D MVLD L IK D T+ RRSCREG+CGS G+N++G N LAC+ Sbjct: 1 MQDFQIDTSGKDLMVLDVLELIKA-QDTTVGYRRSCREGVCGSDGLNMNGKNGLACITPL 59 Query: 104 -MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + PLP + VI+DLVVDM FY+Q+ ++P+L+ +P P+ E LQ+ EDR Sbjct: 60 SETVKSNKLVIRPLPGLPVIRDLVVDMGMFYAQYEKVQPYLQNDTPAPSIERLQTPEDRA 119 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 K+DGLYEC++CACCST+CPS+WWN DR++GP+ LLQAYR+L DSRD ERL L+DPF Sbjct: 120 KLDGLYECILCACCSTACPSFWWNPDRFIGPSGLLQAYRFLADSRDNATDERLAQLDDPF 179 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++RCH I NC CPKGLNP KAI I+ MLL R Sbjct: 180 SVFRCHGIQNCVNVCPKGLNPTKAIGHIRNMLLTRA 215 >gi|220911972|ref|YP_002487281.1| succinate dehydrogenase iron-sulfur subunit [Arthrobacter chlorophenolicus A6] gi|219858850|gb|ACL39192.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arthrobacter chlorophenolicus A6] Length = 260 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 93/243 (38%), Positives = 145/243 (59%), Gaps = 8/243 (3%) Query: 23 GEKNLKEY----RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 G + + R+ R+NP+ D Y++ + VLD L +K ++D +L+ RR Sbjct: 20 GGGEIPTFDVHMRVRRYNPEVSEEATWDDYHLTMYGTD-RVLDALHKVKWEMDGSLSFRR 78 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SC G+CGS M I+G N LAC +KD I V P+ + V KDL+VDM F+ + Sbjct: 79 SCAHGVCGSDAMRINGRNRLACKTLLKDLDTSKPITVEPIKGLPVEKDLIVDMEPFFQSY 138 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + P+L +P KE LQS EDR++ D +C++CA C++SCP +W + +Y GPA + Sbjct: 139 REVMPFLINKGHEPTKERLQSAEDRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAI 197 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + A+R++ DSRD+ RL+ L D ++RC T NC+++CP+G+ +AIA++K +L Sbjct: 198 VNAHRFIFDSRDDAGDMRLEILNDKEGVWRCRTTFNCSEACPRGIQVTQAIAEVKQAILS 257 Query: 257 RKI 259 RKI Sbjct: 258 RKI 260 >gi|239943739|ref|ZP_04695676.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] gi|239990191|ref|ZP_04710855.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces roseosporus NRRL 11379] gi|291447199|ref|ZP_06586589.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] gi|291350146|gb|EFE77050.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] Length = 255 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+NP+ + +++D VLD L IK ++D TLT RRSC GICGS Sbjct: 25 TFRIRRFNPEVSDEAQWQDFQIEIDPKE-RVLDALHKIKWELDGTLTFRRSCAHGICGSD 83 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V + ++V+KDLVVDM F+ + + P+L T Sbjct: 84 AMRINGKNRLACKTLIKDINPDKPIMVEAIKGLTVLKDLVVDMDPFFQAYHDVMPFLITK 143 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ DS Sbjct: 144 GNEPTRERLQSPEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFDS 202 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 203 RDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 254 >gi|325962570|ref|YP_004240476.1| succinate dehydrogenase subunit B [Arthrobacter phenanthrenivorans Sphe3] gi|323468657|gb|ADX72342.1| succinate dehydrogenase subunit B [Arthrobacter phenanthrenivorans Sphe3] Length = 260 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 93/243 (38%), Positives = 146/243 (60%), Gaps = 8/243 (3%) Query: 23 GEKNLKEY----RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 G + + R+ R+NP+ G D +++ + VLD L +K ++D TL+ RR Sbjct: 20 GGGEIPTFDVHMRVRRYNPEVSGEATWDDFHLTMYGTD-RVLDALHKVKWEMDGTLSFRR 78 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SC G+CGS M I+G N LAC +KD I V P+ + V KDL+VDM F+ + Sbjct: 79 SCAHGVCGSDAMRINGRNRLACKTLLKDLDTSKPITVEPIKGLPVEKDLIVDMEPFFQSY 138 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + P+L +P +E LQS EDR++ D +C++CA C++SCP +W + +Y GPA + Sbjct: 139 REVMPFLINKGHEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAI 197 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + A+R++ DSRD+ RL+ L D ++RC T NC+++CP+G+ +AIA++K +L Sbjct: 198 VNAHRFIFDSRDDAGDMRLEILNDKEGVWRCRTTFNCSEACPRGIQVTQAIAEVKQAILS 257 Query: 257 RKI 259 RKI Sbjct: 258 RKI 260 >gi|257069276|ref|YP_003155531.1| succinate dehydrogenase subunit B [Brachybacterium faecium DSM 4810] gi|256560094|gb|ACU85941.1| succinate dehydrogenase subunit B [Brachybacterium faecium DSM 4810] Length = 253 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 92/234 (39%), Positives = 141/234 (60%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R++PD+ + + V + VLD L IK +D +LT RRSC GICGS Sbjct: 22 VTLRISRFDPDSSKGARWEDFTVTMHGTD-RVLDALHEIKWHVDGSLTFRRSCAHGICGS 80 Query: 88 CGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +KD I I V P+ + V KDL+VDM F+ ++ I P+L Sbjct: 81 DAMRINGRNRLACKTLLKDLDIDKPITVEPIKGLPVEKDLIVDMEPFFDSYKEIMPFLVA 140 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P++E LQS E R++ D +C++CA C++SCP +W + +Y GPA ++ A+R++ D Sbjct: 141 GGQEPSRERLQSAEQRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFD 199 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD+ +RL+ L ++RC T NCT++CP+G+ KAIA++K ++ +I Sbjct: 200 SRDDAGEQRLEILNSKEGVWRCRTTFNCTEACPRGIQVTKAIAEVKQAVITGRI 253 >gi|55981422|ref|YP_144719.1| succinate dehydrogenase iron-sulfur subunit [Thermus thermophilus HB8] gi|55772835|dbj|BAD71276.1| succinate dehydrogenase, iron-sulfur subunit [Thermus thermophilus HB8] Length = 232 Score = 221 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 137/228 (60%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R++P P +TY V+ + VLD L +K D +L RRSC GICGS Sbjct: 3 VTLKVLRFDPAKDKKPRWETYQVEAE-PWDRVLDLLHKVKWYQDGSLAFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC ++D+ I V P+ + V KDL+VDM F++ +R+++P+L Sbjct: 62 DAMLINGRNRLACKTLVRDLGNVITVEPIRGLPVEKDLIVDMEPFFAAYRAVKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R++ D +C++CA C+TSCP +W N Y+GPA ++QA+R++ DSR Sbjct: 122 PPPQRERLQSPEERERFDQGTKCILCASCTTSCPVFWVNG-TYIGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + ER L ++RC T NCT++CP+ + + I ++K +L Sbjct: 181 DRGKRERFQVLGSGGGVWRCRTAYNCTEACPRDIPVTQLIEEVKRAIL 228 >gi|320450962|ref|YP_004203058.1| succinate dehydrogenase, iron-sulfur subunit [Thermus scotoductus SA-01] gi|320151131|gb|ADW22509.1| succinate dehydrogenase, iron-sulfur subunit [Thermus scotoductus SA-01] Length = 232 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 137/228 (60%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R++P P TY V+ + VLD L +K D TL RRSC GICGS Sbjct: 3 VTLKILRFDPAKDQKPTWHTYQVEAE-PWDRVLDLLHKVKWDQDGTLAFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +KD+ I V P+ + V KDL+V+M F++ +R+++P+L Sbjct: 62 DAMLINGRNRLACKTLVKDLGNVITVEPIRGLPVEKDLIVNMEPFFAAYRAVKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PA+E LQS E+R++ D +C++CA C+TSCP +W N YLGPA ++QA+R++ DSR Sbjct: 122 PPPARERLQSPEERERFDQGTKCILCASCTTSCPVFWVNG-TYLGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + ER L ++RC T NCT++CP+ + + I ++K +L Sbjct: 181 DRGKRERFKALGSGSGVWRCRTAYNCTEACPRDIPVTQLIEEVKRAIL 228 >gi|225468448|ref|XP_002264752.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 301 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 136/237 (57%), Positives = 171/237 (72%), Gaps = 5/237 (2%) Query: 28 KEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y+VDL CGPMVLD L IK + D +L+ RRSCREGICG Sbjct: 59 KEFQIYRWNPDFPNTKPHLQSYFVDLSTCGPMVLDALQKIKAEEDSSLSYRRSCREGICG 118 Query: 87 SCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDGTNT+AC++ D + PLPHM IKDLVVD+++FY Q++SIEPWLK Sbjct: 119 SCAMNIDGTNTVACLRPIDADTTKPTTITPLPHMFAIKDLVVDLTNFYQQYKSIEPWLKA 178 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P+ +E QS +DR+K+DGLYEC++CACCSTSCPSYWWN + + GPA LL AYRW+ Sbjct: 179 RQRPEDGREYRQSPKDRKKLDGLYECILCACCSTSCPSYWWNPEEFPGPAALLHAYRWVC 238 Query: 205 DSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK-MMLLDRKI 259 DSRD+F ER+ L E LYRC TI NCT +CPK L+PA AI K+K L+ + + Sbjct: 239 DSRDDFADERVQALTEGLKSLYRCRTIKNCTVNCPKSLDPANAIHKMKTRHLVSQPV 295 >gi|33519790|ref|NP_878622.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Blochmannia floridanus] gi|33504135|emb|CAD83397.1| succinate dehydrogenase iron-sulfur protein [Candidatus Blochmannia floridanus] Length = 242 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 114/235 (48%), Positives = 155/235 (65%), Gaps = 6/235 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ IYR+ P+ K + Y ++ ++ M L L + DPTLT RRSCREG+CGS Sbjct: 3 IKFSIYRFCPEVKKTAYIQEYVMNANSIHKMTLLDALIKLKEQDPTLTFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GMNI+GTN+LAC+ K I + PLP VI+DLVVDMS FY Q+ ++P+ Sbjct: 63 DGMNINGTNSLACITPLIKLINKRRNKKINIRPLPGFPVIRDLVVDMSQFYLQYEKVKPF 122 Query: 143 LKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L P +E LQS E+R K+DG YEC++CACCS++CPS+WWN ++++GPA LL YR Sbjct: 123 LINDLPNQPSREYLQSPEERSKLDGSYECILCACCSSACPSFWWNPEKFIGPAGLLTLYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +LIDSRD + ERL + +D F ++RCH IMNC CPK LNPA++I IK ML+ Sbjct: 183 FLIDSRDTHRKERLKHFQDSFSVFRCHNIMNCVSVCPKKLNPAQSIGHIKRMLIQ 237 >gi|294631043|ref|ZP_06709603.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp. e14] gi|292834376|gb|EFF92725.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp. e14] Length = 259 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + + +++D VLDGL IK +D TLT RRSC GICG Sbjct: 26 TVTFRIRRFNPEVSADAVWEDFQLEIDPKE-RVLDGLHKIKWDLDGTLTFRRSCAHGICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 85 SDAMRINGKNRLACKTLIKDINPEKPITVEPIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 144 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQS EDR + D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 145 TKDTNEPTRERLQSAEDRARFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFI 203 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 204 FDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIAEVKRALITRR 258 >gi|46199391|ref|YP_005058.1| succinate dehydrogenase iron-sulfur subunit [Thermus thermophilus HB27] gi|46197016|gb|AAS81431.1| succinate dehydrogenase iron-sulfur protein [Thermus thermophilus HB27] Length = 232 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 137/228 (60%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R++P P +TY V+ + VLD L +K D +L RRSC GICGS Sbjct: 3 VTLKVLRFDPAKDKKPRWETYQVEAE-PWDRVLDLLHKVKWYQDGSLAFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC ++D+ I V P+ + V KDL+VDM F++ +R+++P+L Sbjct: 62 DAMLINGKNRLACKTLVRDLGNVITVEPIRGLPVEKDLIVDMEPFFAAYRAVKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R++ D +C++CA C+TSCP +W N Y+GPA ++QA+R++ DSR Sbjct: 122 PPPQRERLQSPEERERFDQGTKCILCASCTTSCPVFWVNG-TYIGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + ER L ++RC T NCT++CP+ + + I ++K +L Sbjct: 181 DRGKRERFQVLGSGGGVWRCRTAYNCTEACPRDIPVTQLIEEVKRAIL 228 >gi|282860942|ref|ZP_06270008.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces sp. ACTE] gi|282564678|gb|EFB70214.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces sp. ACTE] Length = 255 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+NP+ + + +D VLD L IK ++D TLT RRSC GICGS Sbjct: 25 TFRIRRFNPEVSDEAQWQDFQISIDPKE-RVLDALHKIKWELDGTLTFRRSCAHGICGSD 83 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L T Sbjct: 84 AMRINGKNRLACKTLIKDINPEKPILVEAIKGLTVLKDLVVDMDPFFQAYRDVMPFLVTK 143 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ DS Sbjct: 144 GNEPTRERLQSPEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFDS 202 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 203 RDEGGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 254 >gi|296138693|ref|YP_003645936.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Tsukamurella paurometabola DSM 20162] gi|296026827|gb|ADG77597.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Tsukamurella paurometabola DSM 20162] Length = 256 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 8/242 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + ++YR+NP++ +Y V L+ LLYIK +D TLT RR Sbjct: 15 PVPPGST-MVTIKVYRFNPEDPDAAGWQSYKVPALPSD-RFLNLLLYIKGYLDGTLTFRR 72 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA-----IAVYPLPHMSVIKDLVVDMSHFY 133 SC G+CGS M I+G N LAC MKD I V P+ + V KDLVVDM F+ Sbjct: 73 SCAHGVCGSDAMRINGVNRLACKMLMKDFLQEGKEVTITVEPIRGLPVEKDLVVDMEPFF 132 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 R+++P+L T +P +E +QS DR++ D +C++CACC+TSCP YW + Y GP Sbjct: 133 DAFRAVKPYLITSGNEPTRERIQSPTDRERFDDTTKCILCACCTTSCPVYWMDGS-YFGP 191 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 192 AAIVNAHRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTDACPRGIQVTKAIQEVKRA 251 Query: 254 LL 255 LL Sbjct: 252 LL 253 >gi|281210634|gb|EFA84800.1| succinate dehydrogenase [Polysphondylium pallidum PN500] Length = 241 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 132/235 (56%), Positives = 172/235 (73%), Gaps = 8/235 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +IYR++ +++ P + TY ++L CGPM+LD L++IKN DPTLT RRSCREGICG Sbjct: 8 VVAIKIYRYSEESEKKPYVQTYNLNLKECGPMILDALIHIKNTQDPTLTFRRSCREGICG 67 Query: 87 SCGMNIDGTNTLAC--VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 SC MNI G+NTLAC G+IA+YPLPHM V++DLV D++HFY QH+S++PWL+ Sbjct: 68 SCAMNISGSNTLACIKKTTDAIDGGSIAIYPLPHMHVVRDLVPDLTHFYQQHKSVKPWLE 127 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN---SDRYLGPAILLQAYR 201 A E+R K+DGLYEC++CACCSTSCPSYWW+ YLGPA+LLQA+R Sbjct: 128 PS--PDAPRYNGKEENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQAFR 185 Query: 202 WLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 W+ DSRD Q ERL N+ ++Y+CHTI+NCT+ CPKGLNPA AIAK+K+ML Sbjct: 186 WISDSRDSIQRERLANISSDNLKIYKCHTILNCTRVCPKGLNPALAIAKMKLMLA 240 >gi|323357075|ref|YP_004223471.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Microbacterium testaceum StLB037] gi|323273446|dbj|BAJ73591.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Microbacterium testaceum StLB037] Length = 261 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 136/233 (58%), Gaps = 5/233 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L + I R++P+ P Y V+L + VLD L IK + D +L+ RRSC GICG Sbjct: 28 LVTFNIRRFDPEVDDEPRWVDYDVELYSTD-RVLDALHKIKWETDGSLSFRRSCAHGICG 86 Query: 87 SCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KD I I V + + + KDL+VDM F++ +R ++P+L Sbjct: 87 SDAMRINGRNRLACKTLIKDLDISQPIYVEAIKGLPLEKDLIVDMEPFFASYREVQPFLI 146 Query: 145 TVSPKPAKELLQSH-EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + S + DR+ D +C++CA C++SCP +W + +Y GPA ++ A+R++ Sbjct: 147 SNSKPEPGKERVQSIVDREVFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFI 205 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD+ RLD L D ++RC T NCT++CP+G+ KAIA++K +L Sbjct: 206 FDSRDDAGDVRLDILNDKEGVWRCRTTFNCTEACPRGIEVTKAIAEVKQAVLR 258 >gi|149024459|gb|EDL80956.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_f [Rattus norvegicus] Length = 210 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 138/204 (67%), Positives = 166/204 (81%), Gaps = 3/204 (1%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPL 116 MVLD L+ IKN+ID TLT RRSCREGICGSC MNI+G NTLAC + + G + +YPL Sbjct: 1 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCA 174 PHM VIKDLV D+S+FY+Q++SIEP+LK + ++ LQS EDR+K+DGLYEC++CA Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LYRCHTIMNCT Sbjct: 121 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCT 180 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRK 258 Q+CPKGLNP KAIA+IK M+ K Sbjct: 181 QTCPKGLNPGKAIAEIKKMMATYK 204 >gi|218295721|ref|ZP_03496517.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermus aquaticus Y51MC23] gi|218243880|gb|EED10407.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermus aquaticus Y51MC23] Length = 232 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 138/228 (60%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R++P+ G P TY V+ + VLD L +K D TL RRSC GICGS Sbjct: 3 VTLKVLRFDPNKDGKPEWRTYQVEAE-PWDRVLDLLHKVKADQDGTLAFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +KD+ I V P+ + V KDL+VDM F++ +R+++P+L Sbjct: 62 DAMLINGRNRLACKTLVKDLGSVITVEPIRGLPVEKDLIVDMEPFFAAYRAVKPYLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R++ D +C++CA C+TSCP +W N Y+GPA ++QA+R++ DSR Sbjct: 122 PPPQRERLQSPEERERFDHGTKCILCASCTTSCPVFWVNG-AYIGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + ER L ++RC T NCT++CP+ + + I ++K +L Sbjct: 181 DRGKRERFKALGSGSGVWRCRTAYNCTEACPREIPVTQLIEEVKRAIL 228 >gi|163839065|ref|YP_001623470.1| succinate dehydrogenase iron-sulfur subunit [Renibacterium salmoninarum ATCC 33209] gi|162952541|gb|ABY22056.1| succinate dehydrogenase iron-sulfur protein [Renibacterium salmoninarum ATCC 33209] Length = 270 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 142/238 (59%), Gaps = 8/238 (3%) Query: 28 KEYRIYRWNPD----NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++ R+NP+ + D + + + VLD L IK + D TL+ RRSC G Sbjct: 35 ITLKVRRYNPEAGGADGEEAHWDEWKLTMYGTD-RVLDALHKIKWEHDGTLSFRRSCAHG 93 Query: 84 ICGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 +CGS M I+G N LAC +KD K I V P+ + V KDL+VDM F+ +R I P Sbjct: 94 VCGSDAMRINGRNRLACKTLLKDLDTKKPITVEPIKGLPVEKDLIVDMEPFFQSYREIMP 153 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L +P KE LQS EDR++ D +C++CA C++SCP +W + +Y GPA ++ A+R Sbjct: 154 FLINKGHEPTKERLQSAEDRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHR 212 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ DSRD+ RL+ L D ++RC T NC+++CP+G+ KAI+++K +L R+I Sbjct: 213 FIFDSRDDAGDMRLEILNDKEGVWRCRTTFNCSEACPRGIQVTKAISEVKQAILARQI 270 >gi|260907391|ref|ZP_05915713.1| succinate dehydrogenase iron-sulfur subunit [Brevibacterium linens BL2] Length = 265 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 89/232 (38%), Positives = 137/232 (59%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I R++P+ + Y V + VLD L IK + D +L+ RRSC G+CGS Sbjct: 35 TFKIARFDPEQDEEAHWEEYKVTMYGTD-RVLDALHKIKWEEDGSLSFRRSCAHGVCGSD 93 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KD I V + + + KD++VDM F+ +R + P+L T Sbjct: 94 AMRINGRNRLACKTLLKDLDTSKPITVEAIKGLPLEKDMIVDMEPFFQSYREVMPFLVTS 153 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS E R+ D +C++CA C++SCP +W + +Y GPA ++ A+R++ DS Sbjct: 154 GHEPTRERLQSAEQREAFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFDS 212 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE RL+ L D ++RC T NCT++CP+G+ KAIA++K +L R Sbjct: 213 RDEGGDMRLEVLNDKEGVWRCRTTFNCTEACPRGIEITKAIAEVKQAILQRA 264 >gi|298246056|ref|ZP_06969862.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ktedonobacter racemifer DSM 44963] gi|297553537|gb|EFH87402.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ktedonobacter racemifer DSM 44963] Length = 235 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 138/225 (61%), Gaps = 2/225 (0%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 RI R++P+ P D + V+++ +LD L IK +D TLT RRSC G+CGS M Sbjct: 6 RIKRFDPERDNKPYWDEFTVEVEPID-RLLDALNNIKWTMDGTLTYRRSCAHGVCGSDAM 64 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 I+G N LAC M+D+ + + P+ VIKDLVVDM F+ +++ ++P+L T +P Sbjct: 65 RINGRNRLACKVLMRDVGKKVTIEPMLGYPVIKDLVVDMDQFFDKYKQVKPYLITYDSEP 124 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 E LQS E+R + D +C++C C+ SCPS W N D ++GPA ++ A+R++ DSRDE Sbjct: 125 GTERLQSAEERARFDEGTKCILCGACTGSCPSIWGNQD-WVGPAAIVNAHRFIFDSRDEG 183 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ERL+ L ++RC TI NC+ +CP+G+ I ++K ++ Sbjct: 184 AAERLNILGKKDGVWRCRTIFNCSDACPRGIPVTDLIEEVKRAII 228 >gi|320008972|gb|ADW03822.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces flavogriseus ATCC 33331] Length = 256 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+NP+ + + +D VLD L IK ++D TLT RRSC GICGS Sbjct: 26 TFRIRRFNPEVSDEVEWQDFEISIDPKE-RVLDALHKIKWEMDGTLTFRRSCAHGICGSD 84 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L T Sbjct: 85 AMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMDPFFQAYRDVMPFLVTK 144 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ DS Sbjct: 145 GNEPTRERLQSPEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFDS 203 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 204 RDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 255 >gi|218459684|ref|ZP_03499775.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli Kim 5] Length = 200 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 152/200 (76%), Positives = 177/200 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PAKE QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQAY 200 PSYWWN DRYLGPA+LLQAY Sbjct: 181 PSYWWNGDRYLGPAVLLQAY 200 >gi|32491169|ref|NP_871423.1| succinate dehydrogenase iron-sulfur subunit [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166376|dbj|BAC24566.1| sdhB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 247 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 112/239 (46%), Positives = 154/239 (64%), Gaps = 5/239 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 IYR+NP + P M + + M+L +L +IDPTL+ R+SCREG+C Sbjct: 6 KKINISIYRYNPHHNIPPKMQNFNFYFEKEKDMMLLDVLMSLKEIDPTLSFRKSCREGVC 65 Query: 86 GSCGMNIDGTNTLACVKDM----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GS GMNI+G N LAC+ + K+ K I + PLP + +I+DLVVDM+ F+ Q++ I+P Sbjct: 66 GSDGMNINGKNGLACITPISILLKNKKKQITIRPLPGLPIIRDLVVDMTSFFKQYKKIKP 125 Query: 142 WLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ KE LQS ++R +DG YEC++C CCST+CPS+WWN D+++GPA LL AY Sbjct: 126 YIINNKKIILEKENLQSPKERSLLDGSYECILCGCCSTACPSFWWNPDKFIGPAGLLSAY 185 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+L+D+RD + ERL L D F + RCH IMNC CPK LNP KAI IK ML+ + I Sbjct: 186 RFLVDNRDSAKKERLKQLSDSFSVLRCHGIMNCVSVCPKKLNPTKAIGSIKNMLIKKVI 244 >gi|51893778|ref|YP_076469.1| succinate dehydrogenase iron-sulfur protein [Symbiobacterium thermophilum IAM 14863] gi|51857467|dbj|BAD41625.1| succinate dehydrogenase iron-sulfur protein [Symbiobacterium thermophilum IAM 14863] Length = 243 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 4/233 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R++P+ DT+ V+ + G VL+ LL++ K DP+L R SCRE ICGSC Sbjct: 9 KLRVFRYDPEKDEKQHYDTFTVEYRD-GMTVLEALLWVFEKKDPSLAFRYSCREAICGSC 67 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I G LAC +KD + V PLPHM VIKDLVVD + F+ + ++PWL Sbjct: 68 AMYISGRYALACRVQVKDALEGDTVTVSPLPHMRVIKDLVVDQTKFWENYARVKPWLIND 127 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P P +E LQS EDR K + +C++C C +SCPS N++ YLGP L+ A R+ D+ Sbjct: 128 NPPPERERLQSPEDRAKYNMEIDCILCGACFSSCPS-GANNEEYLGPHALVWASRFFHDT 186 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD + ERL+ + + ++RCHTI NC ++CPK +NP +AI K+K + K+ Sbjct: 187 RDTAKRERLEIVASEYGVFRCHTIFNCVEACPKHINPTEAIQKLKKAAMAYKM 239 >gi|58696677|ref|ZP_00372228.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila simulans] gi|58537139|gb|EAL60247.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila simulans] Length = 204 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 134/201 (66%), Positives = 164/201 (81%), Gaps = 1/201 (0%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117 MVLD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLP Sbjct: 1 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLP 60 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH-EDRQKIDGLYECVMCACC 176 HM VIKDLV D+S FY Q++SI+PWL+ P + EDR+K+DGL +C++CACC Sbjct: 61 HMYVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDCILCACC 120 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 ST CPSYWWNSD++LGPAILLQAYRW+ DSRD GERLD L DPF+LYRCH IMNCT++ Sbjct: 121 STGCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAIMNCTKT 180 Query: 237 CPKGLNPAKAIAKIKMMLLDR 257 CPKGLNPA+AIAK+K ++++R Sbjct: 181 CPKGLNPARAIAKVKQLMVER 201 >gi|329938074|ref|ZP_08287525.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] gi|329302563|gb|EGG46453.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] Length = 259 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 5/236 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 R+ R+NP+ + +++D VLD L IK +D +LT RRSC GICG Sbjct: 26 TVTLRVRRFNPEVAAEATWQDFQLEMDPKE-RVLDALHKIKWDVDGSLTFRRSCAHGICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 85 SDAMRINGKNRLACKTLIKDINPEKPITVEPIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 144 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 145 TKDTNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFI 203 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R++ Sbjct: 204 FDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRRL 259 >gi|54022913|ref|YP_117155.1| succinate dehydrogenase iron-sulfur subunit [Nocardia farcinica IFM 10152] gi|54014421|dbj|BAD55791.1| putative succinate dehydrogenase iron-sulfur subunit [Nocardia farcinica IFM 10152] Length = 257 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 98/246 (39%), Positives = 145/246 (58%), Gaps = 9/246 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + ++ R+NP++ +++ V + L+ L+YIK+ +D TLT RR Sbjct: 15 PVPEGST-MITVKVARFNPEDGQGAHWESFQVPVLPTD-RFLNVLIYIKSYLDGTLTFRR 72 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKG------AIAVYPLPHMSVIKDLVVDMSHF 132 SC G+CGS M I+G N LAC MKD+ + V P+ + V KDLVVDM F Sbjct: 73 SCAHGVCGSDAMRINGVNRLACKVLMKDMLPKDGKSITVTVEPIRGLPVEKDLVVDMEPF 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + R+++P+L T +P +E +QS DR + D +C++CACC+TSCP Y W+ Y G Sbjct: 133 FDAFRAVKPYLITSGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVY-WHDGSYFG 191 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 192 PAAIVNAHRFIFDSRDEGARERLDILNDVEGVWRCRTTFNCTDACPRGIEVTKAIQEVKR 251 Query: 253 MLLDRK 258 LL + Sbjct: 252 ALLFAR 257 >gi|296128869|ref|YP_003636119.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas flavigena DSM 20109] gi|296020684|gb|ADG73920.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas flavigena DSM 20109] Length = 261 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 96/243 (39%), Positives = 142/243 (58%), Gaps = 14/243 (5%) Query: 28 KEYRIYRWNPDNKG----------NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +I R+ P ++ P D + VD+ VLD L IK + D +LT R Sbjct: 20 VTLKIRRFLPADEDLPAFGEAFVAEPRWDEFTVDVHGTD-RVLDALHKIKWEQDGSLTFR 78 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RSC GICGS M I+G N LAC +KD I V P+ + V+KDLVVDM F++ Sbjct: 79 RSCAHGICGSDAMRINGRNRLACKTLLKDLDPSKPITVEPIKGLPVVKDLVVDMEPFFAS 138 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R I P+L T +P KE LQS + R++ D +C++CA C++SCP +W + +Y GPA Sbjct: 139 YREIMPFLITTGTEPTKERLQSPQQRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAA 197 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE +RL+ L D ++RC T NCT++CP+G+ KAI ++K ++ Sbjct: 198 IVNAHRFIFDSRDEGGSQRLEILNDKEGVWRCRTTFNCTEACPRGIEVTKAIQEVKRAMI 257 Query: 256 DRK 258 R Sbjct: 258 TRA 260 >gi|21223231|ref|NP_629010.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces coelicolor A3(2)] gi|256785666|ref|ZP_05524097.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces lividans TK24] gi|289769559|ref|ZP_06528937.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces lividans TK24] gi|7649585|emb|CAB89074.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces coelicolor A3(2)] gi|289699758|gb|EFD67187.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces lividans TK24] Length = 257 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 96/235 (40%), Positives = 147/235 (62%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +R+ R+NP+ + + +++D VLD L IK ++D +LT RRSC GICG Sbjct: 24 TVTFRVRRFNPEVAAEATWEDFQLEIDPKE-RVLDALHKIKWELDGSLTFRRSCAHGICG 82 Query: 87 SCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KD + I V P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 83 SDAMRINGKNRLACKTLIKDLSPEKPITVEPIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 142 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQ+ EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 143 TKDTNEPTRERLQTAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFI 201 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 202 FDSRDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIAEVKRALITRR 256 >gi|297192542|ref|ZP_06909940.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] gi|197718083|gb|EDY61991.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 252 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 145/232 (62%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+NP+ + + + +++D VLD L IK +D +LT RRSC GICGS Sbjct: 22 TFRIRRFNPEVSEHAVWEDFQIEIDPKE-RVLDALHKIKWDVDGSLTFRRSCAHGICGSD 80 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L T Sbjct: 81 AMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMEPFFQAYRDVMPFLITK 140 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ DS Sbjct: 141 GNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFDS 199 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 200 RDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 251 >gi|311896445|dbj|BAJ28853.1| putative succinate dehydrogenase iron-sulfur protein [Kitasatospora setae KM-6054] Length = 257 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 94/233 (40%), Positives = 144/233 (61%), Gaps = 4/233 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +RI R+NP+ +P Y + +D VLD L IK + D TLT RRSC GICGS Sbjct: 26 VTFRIRRFNPEEHPDPVWVDYQLLMDPKE-RVLDALNKIKWEQDGTLTYRRSCAHGICGS 84 Query: 88 CGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +K + + I V + ++V+KDL+VDM F+ ++ + P+L T Sbjct: 85 DAMRINGRNRLACKTLIKDVNPEKPITVEAIKGLAVLKDLIVDMDPFFQAYKDVMPFLIT 144 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P +E LQS DR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ D Sbjct: 145 NGNEPTRERLQSQSDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFD 203 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 SRDE +RL+ L D ++RC T NC+++CP+G+ KAI ++K L+ R+ Sbjct: 204 SRDEGGEQRLEILNDREGVWRCRTTFNCSEACPRGIEVTKAIQEVKRALVTRR 256 >gi|254393802|ref|ZP_05008916.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|294814599|ref|ZP_06773242.1| Succinate dehydrogenase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|326442987|ref|ZP_08217721.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|197707403|gb|EDY53215.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|294327198|gb|EFG08841.1| Succinate dehydrogenase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] Length = 252 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + + +++D VLDGL IK D TLT RRSC GICG Sbjct: 20 TVTFRIRRFNPEISEHAVWEDFELEIDPKE-RVLDGLHKIKWDQDGTLTFRRSCAHGICG 78 Query: 87 SCGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +K + + I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 79 SDAMRINGKNRLACKTLIKDLNPEKPITVEAIKGLTVLKDLVVDMEPFFQAYRDVMPFLV 138 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQ+ EDR++ D +C++CA C+TSCP + WN +Y GPA ++ A+R++ Sbjct: 139 TEGNEPTRERLQTAEDRERFDDTTKCILCAACTTSCPVF-WNDGQYFGPAAIVNAHRFIF 197 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 198 DSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 251 >gi|297565867|ref|YP_003684839.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Meiothermus silvanus DSM 9946] gi|296850316|gb|ADH63331.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Meiothermus silvanus DSM 9946] Length = 232 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 93/231 (40%), Positives = 141/231 (61%), Gaps = 2/231 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R++P+ P +TY V+ + VLD L +K D +L RRSC GICGS Sbjct: 3 VTLRILRYDPNKDAKPHWETYQVESEPMD-RVLDLLHKVKYFTDGSLAFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +K++ +I+V P+ + V KDLVVDM F++ +R+++P+L Sbjct: 62 DAMVINGKNRLACKALVKELGPSISVEPIRGLPVEKDLVVDMDPFFAAYRAVKPFLINDE 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS DR++ D +C++CA C+TSCP +W N Y+GPA ++QA+R++ DSR Sbjct: 122 PPPERERLQSPADRERFDASTKCILCAACTTSCPVFWVNG-TYIGPAAIVQAHRFIFDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+ ER L ++RC T NCT++CP+ + +AI ++K +L K Sbjct: 181 DKGARERFQALGASTGVWRCRTAYNCTEACPREIPVTQAIEEVKRAILFDK 231 >gi|269795866|ref|YP_003315321.1| succinate dehydrogenase subunit B [Sanguibacter keddieii DSM 10542] gi|269098051|gb|ACZ22487.1| succinate dehydrogenase subunit B [Sanguibacter keddieii DSM 10542] Length = 254 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 140/235 (59%), Gaps = 6/235 (2%) Query: 28 KEYRIYRWNPDN--KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 ++ R++P++ D + V VLD L IK + D ++T RRSC GIC Sbjct: 21 VTLKVRRYSPESAHGDEAYWDEFTVTAHGTD-RVLDALHKIKWEHDGSVTFRRSCAHGIC 79 Query: 86 GSCGMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 GS M I+G N LAC +K + I V P+ + VIKDLVVDM F++ +R I P+L Sbjct: 80 GSDAMRINGRNRLACKTLLKDVNPDKPIIVEPIKGLPVIKDLVVDMEPFFASYREIMPFL 139 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P+ E LQS E R++ D +C++CA C++SCP +W + +Y GPA ++ A+R++ Sbjct: 140 VTTGNQPSGERLQSAEQRERFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFI 198 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NC+++CP+G+ KAI ++K ++ R Sbjct: 199 FDSRDEGAEQRLEILNDKEGVWRCRTTFNCSEACPRGIEVTKAIQEVKRAMITRA 253 >gi|239929338|ref|ZP_04686291.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291437671|ref|ZP_06577061.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291340566|gb|EFE67522.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] Length = 259 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 147/235 (62%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + +++D VLDGL IK ++D TLT RRSC GICG Sbjct: 26 TVTFRIRRFNPEVSAEATWEDFQLEIDPKE-RVLDGLHKIKWELDGTLTFRRSCAHGICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I + + ++V+KDLVVDM F+ +R + P+L Sbjct: 85 SDAMRINGKNRLACKTLIKDINPEKPITIEAIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 144 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQS EDR++ D +C++CA C+TSCP + WN +Y GPA ++ A+R++ Sbjct: 145 TKDTNEPTRERLQSAEDRERFDDTTKCILCAACTTSCPVF-WNDGQYFGPAAIVNAHRFI 203 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 204 FDSRDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIAEVKRALITRR 258 >gi|226442031|gb|ACO57605.1| succinate dehydrogenase complex subunit B [Gillichthys seta] Length = 241 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 133/218 (61%), Positives = 164/218 (75%), Gaps = 4/218 (1%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 V+ + AP E +K+++IYRW+PD P M TY ++LD CGPMVLD L+ IKN++ Sbjct: 24 VRYAQTAAAPAPEPRIKKFQIYRWDPDTAGDKPRMQTYEINLDTCGPMVLDALIKIKNEM 83 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 DPTLT RRSCREGICGSC MNI+G NTLAC K + +YPLPHM V+KDLV DM Sbjct: 84 DPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDM 143 Query: 130 SHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S+FY+Q++SIEP+LK + + QS EDRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 144 SNFYAQYKSIEPYLKKKDESQEGKNQYYQSVEDRQKLDGLYECILCACCSTSCPSYWWNG 203 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LY Sbjct: 204 DKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLY 241 >gi|256832056|ref|YP_003160783.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Jonesia denitrificans DSM 20603] gi|256685587|gb|ACV08480.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Jonesia denitrificans DSM 20603] Length = 252 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 143/234 (61%), Gaps = 5/234 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R+NP+ + + + + VLD L IK D +LT RRSC GICGS Sbjct: 20 VTLKVRRFNPEQSDEAFWEEHTLTMYGTD-RVLDALHKIKWDHDGSLTFRRSCAHGICGS 78 Query: 88 CGMNIDGTNTLACV---KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 M I+G N LAC KD+ KG I V P+ + VIKDLVVDM F++ +R I P+L Sbjct: 79 DAMRINGRNRLACKVLLKDLNPEKGPITVEPIKGLPVIKDLVVDMEPFFASYREIMPFLV 138 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P+KE LQS E R++ D +C++CA C++SCP +W + +Y GPA ++ A+R++ Sbjct: 139 TAGNQPSKERLQSPEQRERYDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIF 197 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC TI NCT++CP+G+ KAI ++K ++ R Sbjct: 198 DSRDEGTTQRLEILNDKEGVWRCRTIFNCTEACPRGIEVTKAIQEVKQAMIRRA 251 >gi|148681387|gb|EDL13334.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_d [Mus musculus] gi|148681390|gb|EDL13337.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_d [Mus musculus] Length = 210 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 134/204 (65%), Positives = 165/204 (80%), Gaps = 3/204 (1%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPL 116 MVLD L+ IKN++D TLT RRSCREGICGSC MNI+G NTLAC + + + +YPL Sbjct: 1 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCA 174 PHM VIKDLV D+S+FY+Q++SIEP+LK + ++ LQS EDR+K+DGLYEC++CA Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F ERL L+DPF +YRCHTIMNCT Sbjct: 121 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCT 180 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRK 258 Q+CPKGLNP KAIA+IK M+ K Sbjct: 181 QTCPKGLNPGKAIAEIKKMMATYK 204 >gi|269837026|ref|YP_003319254.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sphaerobacter thermophilus DSM 20745] gi|269786289|gb|ACZ38432.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sphaerobacter thermophilus DSM 20745] Length = 233 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 142/228 (62%), Gaps = 2/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R+NP+ P + Y V+++ VLD L +K D TLT RRSC G+CGS Sbjct: 3 VHLRIQRFNPEVDSKPYFEEYDVEVEPTD-RVLDALNKVKWFRDGTLTYRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC ++D+ I + PL VI+DLVVDM F++ ++S+ P+L Sbjct: 62 DAMRINGRNRLACKVLIRDVGTDITIEPLVGFRVIRDLVVDMEPFFNAYKSVMPFLINDD 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P+P E LQS E+R++ D +C++CACC+++CP W N D ++GPA ++ A+R++ DSR Sbjct: 122 PEPTTERLQSPENRERFDDTTKCILCACCTSACPITWTN-DEFVGPAAIVNAHRFIYDSR 180 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D+ +RL L ++RC T+ NCT++CP+G+ +AI ++K LL Sbjct: 181 DQGAADRLAVLNQKSGVWRCRTVFNCTEACPRGIQVTRAIEEVKRSLL 228 >gi|226442029|gb|ACO57604.1| succinate dehydrogenase complex subunit B [Gillichthys mirabilis] Length = 241 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 134/218 (61%), Positives = 165/218 (75%), Gaps = 4/218 (1%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKI 70 V+ + AP E +K+++IYRW+PD G P M TY ++LD CGPMVLD L+ IKN++ Sbjct: 24 VRYAQTAAAPAPEPRIKKFQIYRWDPDTPGDKPRMQTYEINLDTCGPMVLDALIKIKNEM 83 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 DPTLT RRSCREGICGSC MNI+G NTLAC K + +YPLPHM V+KDLV DM Sbjct: 84 DPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDM 143 Query: 130 SHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S+FY+Q++SIEP+LK + + QS EDRQK+DGLYEC++CACCSTSCPSYWWN Sbjct: 144 SNFYAQYKSIEPYLKKKDESQEGKNQYYQSVEDRQKLDGLYECILCACCSTSCPSYWWNG 203 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF LY Sbjct: 204 DKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLY 241 >gi|218514801|ref|ZP_03511641.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli 8C-3] Length = 199 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 150/199 (75%), Positives = 176/199 (88%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MVE+ LPK S+++ GK+W P G N +E+R+YRW+PD+ NP +DT+Y+D+D+CGPMVL Sbjct: 1 MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL 60 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 DGLLYIKNKIDPTLTLRRSCREGICGSC MNIDGTNTLAC K + DIKGA+ VYPLPHM Sbjct: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLPHMP 120 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V+KDLV D+S+FY+QHRSIEPWLKTVSP PA+E QSHEDRQK+DGLYEC++CACCSTSC Sbjct: 121 VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAQEWKQSHEDRQKLDGLYECILCACCSTSC 180 Query: 181 PSYWWNSDRYLGPAILLQA 199 PSYWWN DRYLGPA+LLQA Sbjct: 181 PSYWWNGDRYLGPAVLLQA 199 >gi|114554308|ref|XP_513112.2| PREDICTED: similar to Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) isoform 4 [Pan troglodytes] Length = 210 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 133/204 (65%), Positives = 165/204 (80%), Gaps = 3/204 (1%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPL 116 MVLD L+ IKN++D TLT RRSCREGICGSC MNI+G NTLAC + + + +YPL Sbjct: 1 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCA 174 PHM VIKDLV D+S+FY+Q++SIEP+LK + ++ LQS E+R+K+DGLYEC++CA Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTIMNCT Sbjct: 121 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCT 180 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRK 258 ++CPKGLNP KAIA+IK M+ K Sbjct: 181 RTCPKGLNPGKAIAEIKKMMATYK 204 >gi|239917019|ref|YP_002956577.1| succinate dehydrogenase subunit B [Micrococcus luteus NCTC 2665] gi|281414519|ref|ZP_06246261.1| succinate dehydrogenase subunit B [Micrococcus luteus NCTC 2665] gi|239838226|gb|ACS30023.1| succinate dehydrogenase subunit B [Micrococcus luteus NCTC 2665] Length = 263 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 8/253 (3%) Query: 12 VKRGKIWNAPTGEKNLKEY----RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK 67 V + + +A G ++ + ++ R+ P++ D + + + VLD L +K Sbjct: 12 VAQAQTQSAGGGAGEVESFDIVLKVRRYLPESSEESYWDEWRLTMYGTD-RVLDALHKVK 70 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDL 125 D TL+ RRSC G+CGS M I+G N LAC +KD+ I V P+ + V KDL Sbjct: 71 WDHDGTLSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDLSKPILVEPIKGLPVEKDL 130 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +VDM F+ +R I P+L P KE QS DR D +C++CA C++SCP +W Sbjct: 131 IVDMDPFFQSYREIMPFLVAEGHAPTKERYQSQADRAIYDDTTKCILCAACTSSCPVFWT 190 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + +Y GPA ++ A+R++ DSRDE RL+ L D ++RC T NCT +CP+G+ K Sbjct: 191 DG-QYFGPAAIVNAHRFIFDSRDEAGDMRLEILNDKEGVWRCRTTFNCTDACPRGIQVTK 249 Query: 246 AIAKIKMMLLDRK 258 AI+++K +L R+ Sbjct: 250 AISEVKRAILARQ 262 >gi|89573805|gb|ABD77128.1| succinate dehydrogenase complex subunit B [Monodelphis domestica] Length = 206 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 128/204 (62%), Positives = 162/204 (79%), Gaps = 3/204 (1%) Query: 40 KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLA 99 P M TY +DL+ CGPMVLD L+ IKN++D TLT RRSCREGICGSC MNI+G NTLA Sbjct: 3 GEKPRMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLA 62 Query: 100 CVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQ 156 C + + + +YPLPHM V+KDL+ D+++FY+Q++SIEP+LK ++ +Q Sbjct: 63 CTRRIDPNLNKVSKIYPLPHMYVMKDLIPDLTNFYAQYKSIEPYLKKKDESQGGKQQYIQ 122 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F ERL Sbjct: 123 SIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLA 182 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 L+DPF LYRCHTIMNCT++CPKG Sbjct: 183 QLQDPFSLYRCHTIMNCTRTCPKG 206 >gi|290957990|ref|YP_003489172.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces scabiei 87.22] gi|260647516|emb|CBG70621.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces scabiei 87.22] Length = 253 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 137/235 (58%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +R+ R+NP+ + +++D VLDGL IK D TLT RRSC GICG Sbjct: 20 TVTFRVRRFNPEVAAEASWQDFVLEIDPKE-RVLDGLHKIKWDEDGTLTFRRSCAHGICG 78 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I + P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 79 SDAMRINGKNRLACKTLIKDINPEKPITIEPIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 138 Query: 145 TVSPKPAKELLQSH-EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 139 TKDTNEPTRERFQTAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFI 197 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 198 FDSRDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 252 >gi|29829941|ref|NP_824575.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces avermitilis MA-4680] gi|29607051|dbj|BAC71110.1| putative succinate dehydrogenase iron-sulfur protein (complex II) [Streptomyces avermitilis MA-4680] Length = 257 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 102/262 (38%), Positives = 149/262 (56%), Gaps = 10/262 (3%) Query: 1 MVEIMLPK-RSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 M L K S+ + G RI R+NP+ + + +++D V Sbjct: 1 MATPTLDKADSKPEAGF----ADSPYITVTLRIRRFNPEISAEAAWEDFQLEIDPKE-RV 55 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLP 117 LD L IK D +LT RRSC GICGS M I+G N LAC +KDI I V + Sbjct: 56 LDALHKIKWDQDGSLTFRRSCAHGICGSDAMRINGKNRLACKTLIKDINPEKPITVEAIK 115 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACC 176 ++V+KDLVVDM F+ +R + P+L T +P +E LQS EDR++ D +C++CA C Sbjct: 116 GLTVLKDLVVDMEPFFQAYRDVMPFLITKDTNEPTRERLQSAEDRERFDDTTKCILCAAC 175 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 ++SCP + WN +Y GPA ++ A+R++ DSRDE +RL+ L D ++RC T NCT + Sbjct: 176 TSSCPVF-WNDGQYFGPAAIVNAHRFIFDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDA 234 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP+G+ KAI ++K L+ R+ Sbjct: 235 CPRGIEVTKAIQEVKRALITRR 256 >gi|115478849|ref|NP_001063018.1| Os09g0370300 [Oryza sativa Japonica Group] gi|49389107|dbj|BAD26386.1| putative succinate dehydrogenase [Oryza sativa Japonica Group] gi|113631251|dbj|BAF24932.1| Os09g0370300 [Oryza sativa Japonica Group] Length = 311 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 124/230 (53%), Positives = 165/230 (71%), Gaps = 5/230 (2%) Query: 27 LKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +KE+R+YRW+PD P + +Y+VDL CGPMVLD L IK + D TL RRSCREGIC Sbjct: 74 VKEFRVYRWSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGIC 133 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC M IDG NT+AC++ + + V PLPHM V++DLVVD++ FY Q++S+EPWLK Sbjct: 134 GSCSMCIDGVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLK 193 Query: 145 TVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + QS E+R+++DGLYEC++CACCS +CPSYWWN++ +LGPA LL AYRW Sbjct: 194 RKTKTKTETTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRW 253 Query: 203 LIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRDE+ ER+ L E +LYRC I +CT +CPK L+PA AI+ +K Sbjct: 254 VSDSRDEYAAERVQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMK 303 >gi|326381945|ref|ZP_08203638.1| succinate dehydrogenase iron-sulfur subunit [Gordonia neofelifaecis NRRL B-59395] gi|326199371|gb|EGD56552.1| succinate dehydrogenase iron-sulfur subunit [Gordonia neofelifaecis NRRL B-59395] Length = 261 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 9/243 (3%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + +IYR+NP++ +++ V +L+ LLY+K +D +LT RRSC Sbjct: 21 AEATMVTLKIYRFNPEDPDAQGFESFRVPALPTD-RLLNLLLYVKGYLDGSLTFRRSCAH 79 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+GTN LAC MKD + I + P+ + V KDLVVDM F+ Sbjct: 80 GVCGSDAMRINGTNRLACKLLMKDLLPKDSSKEITITIEPIKGLPVEKDLVVDMEPFFDA 139 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T +P E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 140 YRAIKPFLITSGNEPTYERIQSQADRARFDDTTKCILCACCTTSCPVFWNEGS-YFGPAA 198 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ +AI ++K L+ Sbjct: 199 IVNAHRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTDACPRGIQVTQAIQEVKRALM 258 Query: 256 DRK 258 + Sbjct: 259 FAR 261 >gi|297201912|ref|ZP_06919309.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] gi|197712714|gb|EDY56748.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] Length = 259 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 97/233 (41%), Positives = 144/233 (61%), Gaps = 5/233 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI R+N + + + +++D VLD L IK + D TLT RRSC GICGS Sbjct: 28 TFRIRRFNSEVSAEATWEDFQLEIDPKE-RVLDALHKIKWEQDGTLTFRRSCAHGICGSD 86 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KDI I V P+ ++V+KDLVVDM F+ +R + P+L T Sbjct: 87 AMRINGKNRLACKTLIKDINPSKPITVEPIKGLTVLKDLVVDMEPFFQAYRDVMPFLITK 146 Query: 147 SP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P +E LQ+ EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ D Sbjct: 147 DTNEPTRERLQTAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIFD 205 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 SRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 206 SRDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 258 >gi|254454915|ref|ZP_05068351.1| succinate dehydrogenase iron-sulfur protein [Octadecabacter antarcticus 238] gi|198263617|gb|EDY87888.1| succinate dehydrogenase iron-sulfur protein [Octadecabacter antarcticus 238] Length = 207 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 134/207 (64%), Positives = 163/207 (78%), Gaps = 5/207 (2%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117 MVLD L+ IKN+IDPTLT RRSCREGICGSC MNIDG NTLAC++ + DI+ + VYPLP Sbjct: 1 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIQSISDIRDDVKVYPLP 60 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 HM V+KDLV D++H Y+Q+ SIEPWLKT +P P E LQS DR K++GL CV+C CC+ Sbjct: 61 HMQVVKDLVPDLTHAYAQYASIEPWLKTDTPTPEHERLQSPADRNKLEGLDSCVLCFCCT 120 Query: 178 TSCPSYWWNS-----DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 SCPSYWWN D +LGPA LLQ++RW+ DSRD+ ERL++LE PF+LYRCHTIMN Sbjct: 121 ASCPSYWWNGDKDGTDEFLGPAALLQSHRWISDSRDKATDERLEDLEGPFKLYRCHTIMN 180 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CPKGLNPAKAIA+IK +L RK+ Sbjct: 181 CAVTCPKGLNPAKAIAEIKKRMLKRKV 207 >gi|289705972|ref|ZP_06502346.1| succinate dehydrogenase iron-sulfur subunit [Micrococcus luteus SK58] gi|289557309|gb|EFD50626.1| succinate dehydrogenase iron-sulfur subunit [Micrococcus luteus SK58] Length = 263 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 8/253 (3%) Query: 12 VKRGKIWNAPTGEKNLKEY----RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK 67 V + + +A G ++ + ++ R+ P++ D + + + VLD L +K Sbjct: 12 VAQAQTQSAGGGAGEVESFDIVLKVRRYLPESSEESYWDEWRLTMYGTD-RVLDALHKVK 70 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDL 125 D TL+ RRSC G+CGS M I+G N LAC +KD+ I V P+ + V KDL Sbjct: 71 WDHDGTLSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDLSKPILVEPIKGLPVEKDL 130 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +VDM F+ +R I P+L P KE QS DR D +C++CA C++SCP +W Sbjct: 131 IVDMDPFFQSYREIMPFLVAEGHAPTKERYQSQADRAIYDDTTKCILCAACTSSCPVFWT 190 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + +Y GPA ++ A+R++ DSRDE RL+ L D ++RC T NCT +CP+G+ K Sbjct: 191 DG-QYFGPAAIVNAHRFIFDSRDEAGDMRLEILNDKEGVWRCRTTFNCTDACPRGIQVTK 249 Query: 246 AIAKIKMMLLDRK 258 AI+++K +L R+ Sbjct: 250 AISEVKQAILARQ 262 >gi|309786388|ref|ZP_07681014.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae 1617] gi|308925782|gb|EFP71263.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae 1617] Length = 219 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 114/217 (52%), Positives = 148/217 (68%), Gaps = 4/217 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M Y ++ D M+L L + DP+L+ RRSCREG+CGS G+N++G N LAC+ + Sbjct: 1 MQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPI 60 Query: 105 KDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHED 160 + I + PLP + VI+DLVVDM FY+Q+ I+P+L PA+E LQ E Sbjct: 61 SALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNEQNPPAREHLQMPEQ 120 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDSRD RLD L D Sbjct: 121 REKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSD 180 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 181 AFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 217 >gi|319949459|ref|ZP_08023519.1| succinate dehydrogenase iron-sulfur subunit [Dietzia cinnamea P4] gi|319436885|gb|EFV91945.1| succinate dehydrogenase iron-sulfur subunit [Dietzia cinnamea P4] Length = 263 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 9/246 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + +I R+NP++ + Y V +L+ L+Y+KN ID +L RR Sbjct: 21 PVPPGST-MVTLKIARFNPEDPDSAGWKEYEVPALPSD-RLLNLLMYVKNYIDGSLAFRR 78 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKG------AIAVYPLPHMSVIKDLVVDMSHF 132 SC GICGS M I+G N LAC MKD+ I V PL + V KDL VDM F Sbjct: 79 SCAHGICGSDAMLINGVNRLACKVLMKDMLPKDGKSITITVAPLRGLPVEKDLYVDMEPF 138 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + +R + P+L T +P E +QS DR + D +C++CACC+TSCP +W + Y G Sbjct: 139 FKSYRDVMPYLITSGNQPTAERIQSQTDRARFDDTTKCILCACCTTSCPVFWADGS-YFG 197 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRDE ERL+ L D ++RC T NCT +CP+G+ +AI ++K Sbjct: 198 PAAIVNAHRFIFDSRDEGAAERLEILNDAEGVWRCRTTFNCTDACPRGIQVTQAIQEVKR 257 Query: 253 MLLDRK 258 LL + Sbjct: 258 ALLFAR 263 >gi|312140772|ref|YP_004008108.1| succinate dehydrogenase iron-sulfur subunit sdhb2 [Rhodococcus equi 103S] gi|325675588|ref|ZP_08155272.1| succinate dehydrogenase [Rhodococcus equi ATCC 33707] gi|311890111|emb|CBH49429.1| succinate dehydrogenase iron-sulfur subunit SdhB2 [Rhodococcus equi 103S] gi|325553559|gb|EGD23237.1| succinate dehydrogenase [Rhodococcus equi ATCC 33707] Length = 258 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 8/238 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R+NP++ +++ V +L+ LLY+K +D TLT RRSC G+CG Sbjct: 22 MVTLKIARFNPEDGEGQRWESFQVPTLPTD-RLLNLLLYVKGYLDGTLTFRRSCAHGVCG 80 Query: 87 SCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 S M I+G N LAC M+D+ I V P+ + V KDL+VDM F+ R+++ Sbjct: 81 SDAMRINGVNRLACKVLMRDMLPKDGKPITITVEPIKGLPVEKDLLVDMEPFFDAFRAVK 140 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L T +P +E +QS DR + D +C++CACC+TSCP YW + Y GPA ++ A+ Sbjct: 141 PFLITTGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVYWSDGS-YFGPAAIVNAH 199 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K LL + Sbjct: 200 RFIFDSRDEGAAERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLFAR 257 >gi|88856450|ref|ZP_01131108.1| succinate dehydrogenase [marine actinobacterium PHSC20C1] gi|88814317|gb|EAR24181.1| succinate dehydrogenase [marine actinobacterium PHSC20C1] Length = 252 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 4/232 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 I R++PD P + + V+L VLD L IK ++D +LT RRSC GICGS Sbjct: 22 TLIIRRFDPDVDDEPRWEDFDVELYETD-RVLDALHKIKWEMDGSLTFRRSCAHGICGSD 80 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G N LAC +KD I I V + + + KDL+VDM F+ ++ I P+L Sbjct: 81 AMRINGRNRLACKTLIKDLDITKPIYVEAIKGLPLEKDLIVDMEPFFDSYKEINPFLMAG 140 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + K KE QS +R + D +C++CA C++SCP +W + +Y GPA ++ A+R++ DS Sbjct: 141 ATKGGKERKQSPVERARFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFDS 199 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE RLD L D ++RC T NCT +CP+G+ +AIA++K +L K Sbjct: 200 RDEGSQVRLDILNDKEGVWRCRTTFNCTDACPRGIQVTQAIAEVKQAILKGK 251 >gi|184201439|ref|YP_001855646.1| succinate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] gi|183581669|dbj|BAG30140.1| succinate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] Length = 260 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 91/247 (36%), Positives = 144/247 (58%), Gaps = 8/247 (3%) Query: 19 NAPTGEKNLKEY----RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 AP GE+++ Y R+ R++P+ + D + + + VLD L +K ++D +L Sbjct: 16 PAPEGEESIPTYDVVLRVRRYDPEFESEAHWDEWPLTMYGTD-RVLDALHKVKWELDGSL 74 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHF 132 + RRSC G+CGS M I+G N LAC +KD+ I V P+ + KDL+VDM F Sbjct: 75 SFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDLSKPITVEPIKGLPCEKDLIVDMEPF 134 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + +R I P+L P E QS EDR++ D +C++CA C++SCP +W + +Y G Sbjct: 135 FQSYREIMPFLVNEDHTPTGERFQSQEDRERFDDTTKCILCAACTSSCPVFWTDG-QYFG 193 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRD+ RL+ L D ++RC T NCT++CP+G+ KAIA++K Sbjct: 194 PAAIVNAHRFIFDSRDQAGDMRLEILNDKEGVWRCRTTFNCTEACPRGIQVTKAIAEVKK 253 Query: 253 MLLDRKI 259 + + Sbjct: 254 AVFASAL 260 >gi|328884578|emb|CCA57817.1| Succinate dehydrogenase iron-sulfur protein [Streptomyces venezuelae ATCC 10712] Length = 252 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 99/246 (40%), Positives = 146/246 (59%), Gaps = 5/246 (2%) Query: 16 KIWNAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 K+ + RI R+NP+ + + +++D VLD L IK +D TL Sbjct: 8 KVEKDSAASPYITVTMRIRRFNPEVSDASVWEDFQIEIDPKE-RVLDALHKIKWDVDGTL 66 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHF 132 T RRSC GICGS M I+G N LAC +KDI I V + ++V+KDLVVDM F Sbjct: 67 TFRRSCAHGICGSDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMEPF 126 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + +R + P+L T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y G Sbjct: 127 FQAYRDVMPFLVTKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFG 185 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRDE +RL+ L D ++RC T NCT +CP+G+ KAI ++K Sbjct: 186 PAAIVNAHRFIFDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKR 245 Query: 253 MLLDRK 258 L+ R+ Sbjct: 246 ALITRR 251 >gi|302553707|ref|ZP_07306049.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] gi|302471325|gb|EFL34418.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] Length = 259 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI R+NP+ + + +++D VLD L IK ++D TLT RRSC GICG Sbjct: 26 TVTFRIRRFNPEVAAEAVWEDFQLEIDPKE-RVLDALHKIKWELDGTLTFRRSCAHGICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 85 SDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 144 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQS EDR++ D +C++CA C+TSCP + WN +Y GPA ++ A+R++ Sbjct: 145 TKDTNEPTRERLQSAEDRERFDDTTKCILCAACTTSCPVF-WNDGQYFGPAAIVNAHRFI 203 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 204 FDSRDEAGEQRLEVLNDRDGVWRCRTTFNCTDACPRGIEVTKAIAEVKRALITRR 258 >gi|313680399|ref|YP_004058138.1| succinate dehydrogenase subunit b [Oceanithermus profundus DSM 14977] gi|313153114|gb|ADR36965.1| succinate dehydrogenase subunit B [Oceanithermus profundus DSM 14977] Length = 233 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 3/233 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R+NP+ P ++Y +D + VLD L +K + D TL RRSC ICGS Sbjct: 3 VTLKLLRYNPEADQAPHWESYQLDAEPMD-RVLDLLHKVKWETDGTLAFRRSCGHAICGS 61 Query: 88 CGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C M I+G N LAC ++D I V P+ + V KDLVVDM F+ +++++P+ Sbjct: 62 CAMMINGVNRLACKTLVQDLSGDTITVEPIRGLPVEKDLVVDMEPFFKAYKAVKPYFINN 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P PA+E LQS E+R+ D +C++CA C+TSCP +W N Y+GP+ ++ A+R++ DS Sbjct: 122 DPPPARERLQSPEEREIFDEGTKCILCAACTTSCPVFWING-TYIGPSAIVNAHRFIFDS 180 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ ER L ++RC T NCT++CP+ + I ++K ++ ++ Sbjct: 181 RDQGNAERFRALSGGGGVWRCRTAYNCTEACPREIPVTHLIEEVKRAIMLNQV 233 >gi|193214971|ref|YP_001996170.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] gi|193088448|gb|ACF13723.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] Length = 233 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 98/231 (42%), Positives = 136/231 (58%), Gaps = 3/231 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E I R+NP+ P TY V+ + VLD L +K + D TLT R+SC G+CGS Sbjct: 4 EVTIKRFNPEKDSAPSYKTYQVEAEENE-RVLDVLNKVKWEQDGTLTYRKSCAHGVCGSD 62 Query: 89 GMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +KD + V PLP SV+KDLVVDM F++++ +I+P+L Sbjct: 63 AMLINGENRLACSTLVKDLKSNKLKVEPLPGSSVVKDLVVDMDPFWNKYVTIKPFLINDE 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P E QS E I+ C++C C+ SCPS W D YLGPA LL+AYR++ DSR Sbjct: 123 PVPETERYQSQEAHSLIEEATRCILCGACTFSCPSS-WGDDEYLGPAALLKAYRFIFDSR 181 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL +++ L++C+TI NC Q+CPK ++ K I+ +K + K Sbjct: 182 DRAGDERLQIIDNNKGLWKCYTIFNCVQACPKEIDITKHISALKRKTVAEK 232 >gi|126433855|ref|YP_001069546.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp. JLS] gi|126233655|gb|ABN97055.1| succinate dehydrogenase subunit B [Mycobacterium sp. JLS] Length = 258 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 93/239 (38%), Positives = 142/239 (59%), Gaps = 9/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R+NP+ + ++ V +L+ L Y+K +D TLT RRSC G+CG Sbjct: 22 MVTLKIARFNPEAPDDAGFQSFRVPCLPTD-RLLNLLHYVKWYLDGTLTFRRSCAHGVCG 80 Query: 87 SCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 S M I+G N LAC M+D+ + I + P+ + V KDLVVDM F+ +R++ Sbjct: 81 SDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRGLPVEKDLVVDMEPFFDAYRAV 140 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P+L T +P KE +QS DR + D +C++CA C+TSCP YW Y+GPA ++ A Sbjct: 141 KPYLMTSGNQPTKERIQSQVDRARYDDTTKCILCAACTTSCPIYWTEGS-YVGPAAIVNA 199 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ DSRDE ERLD L D ++RC T NCT++CP+G+ +AI ++K L+ + Sbjct: 200 HRFIFDSRDEGAAERLDILNDADGVWRCRTTFNCTEACPRGIQITQAIQEVKRALMFAR 258 >gi|125563469|gb|EAZ08849.1| hypothetical protein OsI_31111 [Oryza sativa Indica Group] Length = 311 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 124/230 (53%), Positives = 165/230 (71%), Gaps = 5/230 (2%) Query: 27 LKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +KE+R+YRW+PD P + +Y+VDL CGPMVLD L IK + D TL RRSCREGIC Sbjct: 74 VKEFRVYRWSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGIC 133 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSC M IDG NT+AC++ + + V PLPHM V++DLVVD++ FY Q++S+EPWLK Sbjct: 134 GSCSMCIDGVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLK 193 Query: 145 TVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + QS E+R+++DGLYEC++CACCS +CPSYWWN++ +LGPA LL AYRW Sbjct: 194 RKTKTKTETTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRW 253 Query: 203 LIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRDE+ ER+ L E +LYRC I +CT +CPK L+PA AI+ +K Sbjct: 254 VSDSRDEYAAERVQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMK 303 >gi|111023208|ref|YP_706180.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus jostii RHA1] gi|226365713|ref|YP_002783496.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus opacus B4] gi|110822738|gb|ABG98022.1| succinate dehydrogenase Fe-S protein [Rhodococcus jostii RHA1] gi|226244203|dbj|BAH54551.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus opacus B4] Length = 259 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 100/238 (42%), Positives = 141/238 (59%), Gaps = 8/238 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R NP++ D++ V M L+ LLY+K +D TLT RRSC G+CG Sbjct: 24 MVTLKIARMNPESGEGQHWDSFQVPALPTDRM-LNLLLYVKGYLDGTLTFRRSCAHGVCG 82 Query: 87 SCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 S M I+G N LAC MKD+ I V P+ + V KDLVVDM F+ R+++ Sbjct: 83 SDAMRINGVNRLACKLLMKDMLPKDGKPVTITVEPIKGLPVEKDLVVDMEPFFDAFRAVK 142 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L T +P +E +QS DR + D +C++CACC+TSCP YW + Y GPA ++ A+ Sbjct: 143 PFLITTGNEPTRERIQSQHDRARFDDTTKCILCACCTTSCPVYWSDGS-YFGPAAIVNAH 201 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K LL + Sbjct: 202 RFIFDSRDEGASERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLFAR 259 >gi|89573833|gb|ABD77142.1| succinate dehydrogenase complex subunit B [Tupaia glis] Length = 200 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 134/200 (67%), Positives = 163/200 (81%), Gaps = 3/200 (1%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-A 112 CGPMVLD L+ IKN+ID TLT RRSCREGICGSC MNI+G NTLAC + + + Sbjct: 1 RCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSK 60 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYEC 170 +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK ++ LQS E+R+K+DGLYEC Sbjct: 61 IYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYEC 120 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 ++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F ERL L+DPF LYRCHTI Sbjct: 121 ILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTI 180 Query: 231 MNCTQSCPKGLNPAKAIAKI 250 MNCT++CPKGLNP KAIA+I Sbjct: 181 MNCTRTCPKGLNPGKAIAEI 200 >gi|50954259|ref|YP_061547.1| succinate dehydrogenase iron-sulfur subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950741|gb|AAT88442.1| succinate dehydrogenase, iron-sulfur subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 253 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 90/235 (38%), Positives = 137/235 (58%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 I R++P+ P + V+L + LD L IK + D +LT RRSC GICG Sbjct: 20 TVTLIIRRFDPEKDTEPRWQDFDVELYPTDRI-LDALHKIKWEQDGSLTFRRSCAHGICG 78 Query: 87 SCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KD I I V + + + KDL+VDM F++ +R ++P+L Sbjct: 79 SDAMRINGRNRLACKTLIKDLDISKPIYVEAIKGLPLEKDLIVDMEPFFASYREVQPFLI 138 Query: 145 -TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +P KE +QS DR + D +C++CA C++SCP +W + +Y GPA ++ A+R++ Sbjct: 139 ANSTPPEDKERIQSVADRARFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFI 197 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD+ RLD L D ++RC T NCT +CP+G+ +AIA++K ++ K Sbjct: 198 FDSRDDNAQVRLDILNDKEGVWRCRTTFNCTDACPRGIQVTQAIAEVKQAVMRGK 252 >gi|29654693|ref|NP_820385.1| succinate dehydrogenase iron-sulfur subunit [Coxiella burnetii RSA 493] gi|153207707|ref|ZP_01946354.1| succinate dehydrogenase, iron-sulfur protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706875|ref|YP_001424002.1| succinate dehydrogenase iron-sulfur subunit [Coxiella burnetii Dugway 5J108-111] gi|165918974|ref|ZP_02219060.1| succinate dehydrogenase, iron-sulfur protein [Coxiella burnetii RSA 334] gi|212212231|ref|YP_002303167.1| succinate dehydrogenase iron-sulfur subunit [Coxiella burnetii CbuG_Q212] gi|212218997|ref|YP_002305784.1| succinate dehydrogenase iron-sulfur subunit [Coxiella burnetii CbuK_Q154] gi|457724|emb|CAA54873.1| putative succinate dehydrogenase small subunit [Coxiella burnetii] gi|29541961|gb|AAO90899.1| succinate dehydrogenase iron-sulfur protein [Coxiella burnetii RSA 493] gi|120576403|gb|EAX33027.1| succinate dehydrogenase, iron-sulfur protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356161|gb|ABS77623.1| succinate dehydrogenase iron-sulfur protein [Coxiella burnetii Dugway 5J108-111] gi|165917299|gb|EDR35903.1| succinate dehydrogenase, iron-sulfur protein [Coxiella burnetii RSA 334] gi|212010641|gb|ACJ18022.1| succinate dehydrogenase iron-sulfur protein [Coxiella burnetii CbuG_Q212] gi|212013259|gb|ACJ20639.1| succinate dehydrogenase iron-sulfur protein [Coxiella burnetii CbuK_Q154] Length = 243 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 158/236 (66%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + + I R+NP+ P M + +D+ +L L + P + LRRSC Sbjct: 3 SKKSRIMTFSIMRFNPETDKKPYMQDFELDVSAIQGKMLLNALEALREKHPDIGLRRSCA 62 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EG+CGS GMNI+G N LACV +KD+ + V PLP +I+DL+VDM FY+Q++ ++P Sbjct: 63 EGVCGSDGMNINGKNALACVTQLKDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKP 122 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L P KE LQS E+R K+DGLYEC++CACCS+SCPSYWWN D+++GPA LL +YR Sbjct: 123 YLLNDQEAPQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ DSRD + ERLD ++DP+ ++RC TIM+C CPK LNPAKAI KI+ +L Sbjct: 183 FIADSRDSKEKERLDAMKDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRTEMLQE 238 >gi|226305529|ref|YP_002765489.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis PR4] gi|229489568|ref|ZP_04383431.1| succinate dehydrogenase, iron-sulfur protein [Rhodococcus erythropolis SK121] gi|226184646|dbj|BAH32750.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis PR4] gi|229323665|gb|EEN89423.1| succinate dehydrogenase, iron-sulfur protein [Rhodococcus erythropolis SK121] Length = 255 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 8/238 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R NP++ D++ V +L+ LLY+K +D TLT RRSC G+CG Sbjct: 20 MVTLKIARMNPESGEGQHWDSFQVPALPTD-RLLNLLLYVKGYLDGTLTFRRSCAHGVCG 78 Query: 87 SCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 S M I+G N LAC MKD+ I V P+ + V KDLVVDM F+ R+++ Sbjct: 79 SDAMRINGVNRLACKLLMKDMLPKDGKPVTITVEPIKGLPVEKDLVVDMEPFFDAFRAVK 138 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+L T +P +E +QS DR + D +C++CACC+TSCP YW + Y GPA ++ A+ Sbjct: 139 PFLITSGNEPTRERIQSQHDRARFDDTTKCILCACCTTSCPVYWSDGS-YFGPAAIVNAH 197 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K LL + Sbjct: 198 RFIFDSRDEAASERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLFAR 255 >gi|302763777|ref|XP_002965310.1| hypothetical protein SELMODRAFT_82638 [Selaginella moellendorffii] gi|300167543|gb|EFJ34148.1| hypothetical protein SELMODRAFT_82638 [Selaginella moellendorffii] Length = 258 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 134/235 (57%), Positives = 173/235 (73%), Gaps = 4/235 (1%) Query: 24 EKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 N+K IYRW+PD P + Y ++ ++CGPMVLD L+ IKN++DPTLT RRSCRE Sbjct: 22 PPNMKSLAIYRWDPDNTGKKPSLQVYSLNTNDCGPMVLDALIKIKNEMDPTLTFRRSCRE 81 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI+G N LAC+ M + PLPH V+KDLVVDM++FY Q++S+EP Sbjct: 82 GICGSCAMNINGKNGLACLTKMIVDAGEETTITPLPHFYVMKDLVVDMTNFYQQYKSVEP 141 Query: 142 WLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WLK SP PA LQS DR+K+DG+YEC++CACCS+SCPSYWWN +R+LGPA LL A Sbjct: 142 WLKKKSPPPAGTRELLQSKRDREKLDGMYECILCACCSSSCPSYWWNPERFLGPAALLHA 201 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +RW+ DSRDE++ ERL ++E ++LYRCHTI NC +CPK L+PA I KIK ++ Sbjct: 202 HRWIADSRDEYRNERLQSVEGDYKLYRCHTIRNCENACPKSLSPANQIIKIKGLM 256 >gi|108798198|ref|YP_638395.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp. MCS] gi|119867294|ref|YP_937246.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp. KMS] gi|108768617|gb|ABG07339.1| succinate dehydrogenase subunit B [Mycobacterium sp. MCS] gi|119693383|gb|ABL90456.1| succinate dehydrogenase subunit B [Mycobacterium sp. KMS] Length = 258 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 93/239 (38%), Positives = 142/239 (59%), Gaps = 9/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R+NP+ + ++ V +L+ L Y+K +D TLT RRSC G+CG Sbjct: 22 MVTLKIARFNPEAPDDAGFQSFRVPCLPTD-RLLNLLHYVKWYLDGTLTFRRSCAHGVCG 80 Query: 87 SCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 S M I+G N LAC M+D+ + I + P+ + V KDLVVDM F+ +R++ Sbjct: 81 SDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRGLPVEKDLVVDMEPFFDAYRAV 140 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P+L T +P KE +QS DR + D +C++CA C+TSCP YW Y+GPA ++ A Sbjct: 141 KPYLMTSGNQPTKERIQSQVDRARYDDTTKCILCAACTTSCPIYWTEGS-YVGPAAIVNA 199 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ DSRDE ERLD L D ++RC T NCT++CP+G+ +AI ++K L+ + Sbjct: 200 HRFIFDSRDEGAAERLDILNDADGVWRCRTTFNCTEACPRGIQITQAIQEVKRALMFAR 258 >gi|239979850|ref|ZP_04702374.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces albus J1074] gi|291451708|ref|ZP_06591098.1| succinate dehydrogenase [Streptomyces albus J1074] gi|291354657|gb|EFE81559.1| succinate dehydrogenase [Streptomyces albus J1074] Length = 252 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 4/234 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 R+ R+ P+ + + +++D VLD L +K ++D TLT RRSC GICG Sbjct: 20 TITLRVRRFLPEVSDEVTWEDFALEIDPKE-RVLDALHKVKWEMDGTLTFRRSCAHGICG 78 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V P+ ++V+KDLVVDM F+ +R + P+L Sbjct: 79 SDAMRINGRNRLACKTLIKDINPEKPITVEPIKGLAVLKDLVVDMEPFFQAYRDVMPFLV 138 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P +E LQS EDR++ D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 139 TKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFIF 197 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 198 DSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIAEVKKALITRR 251 >gi|161830523|ref|YP_001597241.1| succinate dehydrogenase iron-sulfur subunit [Coxiella burnetii RSA 331] gi|161762390|gb|ABX78032.1| succinate dehydrogenase, iron-sulfur protein [Coxiella burnetii RSA 331] Length = 243 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 158/236 (66%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + + I R+NP+ P M + +D+ +L L + P + LRRSC Sbjct: 3 SKKSRIMTFSIMRFNPETDKKPYMQDFELDVSAIQGKMLLNALEALREKHPDIGLRRSCA 62 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EG+CGS GMNI+G N LACV +KD+ + V PLP +I+DL+VDM FY+Q++ ++P Sbjct: 63 EGVCGSDGMNINGKNALACVTQLKDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKP 122 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +L P KE LQS E+R K+DGLYEC++CACCS+SCPSYWWN D+++GPA LL +YR Sbjct: 123 YLLNDQEAPQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ DSRD + ERLD ++DP+ ++RC TIM+C CPK LNPAKAI KI+ +L Sbjct: 183 FIADSRDSKEKERLDAMKDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRTEMLQE 238 >gi|308176508|ref|YP_003915914.1| succinate dehydrogenase iron-sulfur subunit [Arthrobacter arilaitensis Re117] gi|307743971|emb|CBT74943.1| succinate dehydrogenase iron-sulfur subunit [Arthrobacter arilaitensis Re117] Length = 260 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 137/234 (58%), Gaps = 4/234 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 R+ R+ P+ + + + + + VLD L +K + D TL+ RRSC G+CGS Sbjct: 29 ITLRVRRYLPEATADAYWEDFKLTMYGTD-RVLDALHKVKWEQDGTLSFRRSCAHGVCGS 87 Query: 88 CGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC +KD I V + + + KDL+VDM F+ +R I P+L + Sbjct: 88 DAMRINGRNRLACKTLLKDLDTTKPITVEAIKGLPLEKDLIVDMEPFFQSYREIMPFLIS 147 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P KE QS EDR+ D +C++CA C++SCP +W + +Y GPA ++ A+R++ D Sbjct: 148 KGHEPTKERYQSAEDREIFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFD 206 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD+ RL+ L D ++RC T NCT++CP+G+ KAIA++K +L R + Sbjct: 207 SRDDAGDMRLEILNDKEGVWRCRTTFNCTEACPRGIQVTKAIAEVKQAILARTV 260 >gi|296394556|ref|YP_003659440.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Segniliparus rotundus DSM 44985] gi|296181703|gb|ADG98609.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Segniliparus rotundus DSM 44985] Length = 267 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 101/248 (40%), Positives = 143/248 (57%), Gaps = 8/248 (3%) Query: 14 RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G + + RI R NP+N + V VL+ LLYIK +D T Sbjct: 18 EGSVEPPVPEGSVMVTVRIMRHNPENPSANGWQDFLVPALPTD-RVLNLLLYIKGYLDGT 76 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVV 127 LT RRSC G+CGS + ++G N LAC MKD+ + V P+ + V KDLVV Sbjct: 77 LTFRRSCAHGVCGSDAIRLNGVNRLACKVLMKDLIRKDGKPVVLTVEPIRGLPVEKDLVV 136 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 DM F+ +RSI+P+L SP P KE LQS E+R + D +C++CACC+TSCP +W Sbjct: 137 DMEPFFDAYRSIKPFLINTSPVPEKERLQSAEERHRFDDTTKCILCACCTTSCPVFWTEG 196 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 +Y GPA ++ A+R++ DSRDE ER++ L D + ++RC T NCT +CP+G+ KAI Sbjct: 197 -KYHGPAAIVNAHRFIFDSRDEAGAERMEILNDEYGVWRCRTTFNCTDACPRGIQVTKAI 255 Query: 248 AKIKMMLL 255 ++K +L Sbjct: 256 QEVKRAVL 263 >gi|302342521|ref|YP_003807050.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfarculus baarsii DSM 2075] gi|301639134|gb|ADK84456.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfarculus baarsii DSM 2075] Length = 236 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 106/231 (45%), Positives = 160/231 (69%), Gaps = 3/231 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R++P+ P + V++ G M+LDGL I+ + D TL RRSCREG+CGS G Sbjct: 6 FSILRYDPEKDKKPHYQDFDVEIRRPGMMILDGLNQIRWEQDGTLAYRRSCREGVCGSDG 65 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 +N++G N L CV + ++ + + PLP + ++KDLVVD+ F++++ +++P+L + + Sbjct: 66 VNVNGVNMLTCVTHITEVVKKGRLVIQPLPSLPLVKDLVVDLDDFFNKYFTVKPYLISKT 125 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS R+K+DGLYEC++CACCS+SCPSYW N YLGP+ +L R++ DSR Sbjct: 126 PPPHRERLQSPAQRKKLDGLYECILCACCSSSCPSYWANP-EYLGPSAMLNVARFVEDSR 184 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+ ERLD LED ++RCHTI+NC ++CPK LNP +AIA +K +L+ R+ Sbjct: 185 DDGADERLDMLEDRIGVWRCHTILNCVEACPKSLNPTQAIATLKKLLVQRR 235 >gi|260779588|ref|ZP_05888478.1| succinate dehydrogenase iron-sulfur protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604397|gb|EEX30701.1| succinate dehydrogenase iron-sulfur protein [Vibrio coralliilyticus ATCC BAA-450] Length = 254 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D LD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVEILRYDPEKDAEPHFQTFEVPFDET-MSTLDALGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMALINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|268315786|ref|YP_003289505.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodothermus marinus DSM 4252] gi|262333320|gb|ACY47117.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodothermus marinus DSM 4252] Length = 238 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 6/234 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +I R+NP+ P +TY VD D L LL+IK ID +LT R+SC G+CGS Sbjct: 3 VKVKIKRFNPETDAEPHWETYEVDADPMD-SALSLLLHIKWHIDGSLTFRKSCGHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDM----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 M I+G N LAC + K I PLP V+KDLV+D S F+ ++R+++PWL Sbjct: 62 DAMKINGENRLACSVLVRDLVKGEGDTITFEPLPTAPVVKDLVIDQSRFFEKYRAVKPWL 121 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P P +E LQS E+ ID +C+MC C+ +CPS W + D YLGPA LL+AYR+ Sbjct: 122 ITRTPPPERERLQSPEEFALIDDATKCIMCGACTHACPSTWADPD-YLGPAALLKAYRYT 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRDE ERL ++ L++C+TI NC ++CPK ++ ++ ++ +K + Sbjct: 181 FDSRDEGAEERLPVVDSREGLWKCYTIFNCNEACPKEIDISRWLSALKRRAVME 234 >gi|91203370|emb|CAJ71023.1| similar to succinate dehydrogenase/fumarate reductase (chain B) of E.coli [Candidatus Kuenenia stuttgartiensis] Length = 240 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 3/235 (1%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I+R+NP + Y + VL+GL+YI+ D +L R SCR +CG Sbjct: 5 TISFNIFRFNPASDKEAYFQKYEIPFTRKDLTVLEGLVYIQQHRDDSLAFRSSCRAAVCG 64 Query: 87 SCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC M+I+G LAC + K + + PL HM++ KDL VDM F+ ++ I+P+L Sbjct: 65 SCAMHINGKYRLACNTLISKLNTKTVTIRPLAHMAIQKDLFVDMKPFWEKYEQIKPYLMP 124 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P E +QS ++R K++GL +C++CACC +SCP + D YLGP L R++ Sbjct: 125 GRPLPSEGEQIQSTDERSKLNGLIDCILCACCHSSCPITAMHED-YLGPMSFLNIDRFVS 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD + ERL + ++RCH++ NC + CPK LNP +I +K ++ KI Sbjct: 184 DSRDGARQERLAIVNSENGVWRCHSVFNCQEVCPKDLNPTGSITSLKKEIVKDKI 238 >gi|302790784|ref|XP_002977159.1| hypothetical protein SELMODRAFT_57433 [Selaginella moellendorffii] gi|300155135|gb|EFJ21768.1| hypothetical protein SELMODRAFT_57433 [Selaginella moellendorffii] Length = 232 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 132/230 (57%), Positives = 173/230 (75%), Gaps = 4/230 (1%) Query: 26 NLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N+K + IYRW+PD + P + Y ++ ++CGPMVLD L+ IKN++DPTLT RRSCREGI Sbjct: 1 NMKSFAIYRWDPDNTRKKPSLQVYSLNTNDCGPMVLDALIKIKNEMDPTLTFRRSCREGI 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC MNI+G LAC+ M + PLPH V+KDLVVDM++FY Q++S+EPWL Sbjct: 61 CGSCAMNINGKTGLACLTKMIVDAGEETTITPLPHFYVMKDLVVDMTNFYQQYKSVEPWL 120 Query: 144 KTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K SP P +E LQS DR+K+DG+YEC++CACCS+SCPSYWWN +++LGPA LL A+R Sbjct: 121 KKKSPPPGGTREFLQSKHDREKLDGMYECILCACCSSSCPSYWWNPEKFLGPAALLHAHR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 W+ DSRDE++ ERL ++E ++LYRCHTI NC +CPK L+PA I KIK Sbjct: 181 WIADSRDEYRNERLQSVEGDYKLYRCHTIRNCENACPKSLSPANQIIKIK 230 >gi|145225425|ref|YP_001136103.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium gilvum PYR-GCK] gi|315445773|ref|YP_004078652.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1] gi|145217911|gb|ABP47315.1| succinate dehydrogenase subunit B [Mycobacterium gilvum PYR-GCK] gi|315264076|gb|ADU00818.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1] Length = 256 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 10/252 (3%) Query: 14 RGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 + P G + +I R+NP++ + ++ V +L+ L Y+K +D T Sbjct: 8 KQDTPPVPEGAV-MVTLKIARFNPESPDDAGWQSFRVPCLPSD-RLLNLLHYVKWYLDGT 65 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLV 126 LT RRSC G+CGS M I+G N LAC M+D+ + I + P+ + V KDLV Sbjct: 66 LTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPNKQLTITIEPIRGLPVEKDLV 125 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 VDM F+ R+++P+L T +P +E +QS DR + D +C++CACC+TSCP YW Sbjct: 126 VDMEPFFDAFRAVKPYLITSGNQPTRERIQSQTDRARYDDTTKCILCACCTTSCPVYWSE 185 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 Y GPA ++ A+R++ DSRDE ERLD L D ++RC T NCT++CP+G+ KA Sbjct: 186 GS-YFGPAAIVNAHRFIFDSRDEAAAERLDILNDIDGVWRCRTTFNCTEACPRGIQVTKA 244 Query: 247 IAKIKMMLLDRK 258 I ++K L+ + Sbjct: 245 IQEVKRALMFAR 256 >gi|149192248|ref|ZP_01870462.1| fumarate reductase iron-sulfur subunit [Vibrio shilonii AK1] gi|148833921|gb|EDL50944.1| fumarate reductase iron-sulfur subunit [Vibrio shilonii AK1] Length = 246 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD + YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVEILRYDPEKDSEPYFQTFEVPFDET-MSVLDAIGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDHQNGLKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGAAERMKMINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|254508202|ref|ZP_05120327.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus 16] gi|219548924|gb|EED25924.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus 16] Length = 254 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ + R++P+ P T+ V D LD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVEVLRYDPEKDAEPHFQTFEVPFDET-MSTLDALGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMALINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|169630755|ref|YP_001704404.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium abscessus ATCC 19977] gi|169242722|emb|CAM63750.1| Probable succinate dehydrogenase (iron-sulphur protein) SdhB [Mycobacterium abscessus] Length = 260 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 93/239 (38%), Positives = 142/239 (59%), Gaps = 9/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +I R+NP++ T+ V +L+ LLY+K +D TLT RRSC G+CG Sbjct: 24 MVDLKIQRFNPEDPDAAGWQTFRVPCLPTD-RLLNLLLYVKGYLDGTLTFRRSCAHGVCG 82 Query: 87 SCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 S M I+G N LAC M+D I + P+ + V KDLVV+M F+ +R++ Sbjct: 83 SDAMRINGVNRLACKVLMRDLLPKNPKKTLTITIEPIRGLPVEKDLVVNMEPFFDAYRAV 142 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P++ T +P +E +QS DR + D +C++CACC+TSCP +W + Y GPA ++ A Sbjct: 143 KPFMITSGNQPTREYIQSQTDRARFDDTTKCILCACCTTSCPVFWSDGS-YFGPAAIVNA 201 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ DSRDE ERLD L D ++RC T NCT +CP+G+ KAI ++K L+ + Sbjct: 202 HRFIFDSRDEAAAERLDILNDVDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALMFAR 260 >gi|145531499|ref|XP_001451516.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419171|emb|CAK84119.1| unnamed protein product [Paramecium tetraurelia] Length = 305 Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 123/240 (51%), Positives = 171/240 (71%), Gaps = 3/240 (1%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K++ IYR++P D P +YYVDL PM LD LLYIK+ D +L+LRRSC Sbjct: 57 EEKSKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYLDALLYIKDNYDSSLSLRRSC 116 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MN +G + LAC D+ + PL HM V+KDLVVDM++FY+Q+++I Sbjct: 117 REGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTI 176 Query: 140 EPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+LK +PK KE +QS EDR+ +DGLYECV+CACCSTSCPSYWW+ DRYLGPA+L+Q Sbjct: 177 DPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCSTSCPSYWWHPDRYLGPAVLMQ 236 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYRW++DSRDE+ ERL+ L + ++ C I C+ +CPKGL+P +++ + ++ + K Sbjct: 237 AYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCPKGLDPQRSMNHLMKLIEEYK 296 >gi|313768550|ref|YP_004062224.1| Sdh2 [Plocamiocolax pulvinata] gi|312844677|gb|ADR03240.1| Sdh2 [Plocamiocolax pulvinata] Length = 247 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 136/228 (59%), Positives = 167/228 (73%), Gaps = 1/228 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 K RIYRWNP P + Y + L CGPMVLD L++IKN D TLT RRSCREGICGS Sbjct: 19 KYLRIYRWNPFINQTPWFNVYPISLTKCGPMVLDSLIFIKNMQDSTLTFRRSCREGICGS 78 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C MNI+G N+LAC+K + I +YPLPHM VIKDLV D+++FY+Q++SI+PWL Sbjct: 79 CSMNINGINSLACLKSLNTKSKFITIYPLPHMYVIKDLVPDLTNFYAQYKSIQPWLLNYK 138 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + LQS DR +++GLYEC++CACCS+SCPSYWWN D+YLGPAILLQAYRWL+DSR Sbjct: 139 LPKKEF-LQSKRDRLELNGLYECILCACCSSSCPSYWWNHDKYLGPAILLQAYRWLMDSR 197 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D +R+ L RL+RCHTIMNC++ CPK LNP KAI+ IK LL Sbjct: 198 DLGTKKRIFFLNHKMRLFRCHTIMNCSKVCPKSLNPGKAISYIKYKLL 245 >gi|261254136|ref|ZP_05946709.1| succinate dehydrogenase iron-sulfur protein [Vibrio orientalis CIP 102891] gi|260937527|gb|EEX93516.1| succinate dehydrogenase iron-sulfur protein [Vibrio orientalis CIP 102891] Length = 254 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D LD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVEILRYDPEQDAEPHFQTFEVPFDET-MSTLDALGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C+ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKSERMALINGENGAWGCTFVGYCSDVCPKNVDPAAAVNQGK 229 >gi|120402592|ref|YP_952421.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium vanbaalenii PYR-1] gi|119955410|gb|ABM12415.1| succinate dehydrogenase subunit B [Mycobacterium vanbaalenii PYR-1] Length = 256 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 142/239 (59%), Gaps = 9/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R+NP++ + ++ V +L+ L Y+K +D TLT RRSC G+CG Sbjct: 20 MVTLKIARFNPESPDDAGWQSFRVPCLPSD-RLLNLLHYVKWYLDGTLTFRRSCAHGVCG 78 Query: 87 SCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 S M I+G N LAC M+D+ + I + P+ + V KDLVVDM F+ R+I Sbjct: 79 SDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRGLPVEKDLVVDMEPFFDAFRAI 138 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P+L T +P +E +QS DR + D +C++CACC+TSCP YW Y GPA ++ A Sbjct: 139 KPYLITSGNQPTRERIQSQTDRARYDDTTKCILCACCTTSCPVYWNEGS-YFGPAAIVNA 197 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ DSRDE ERLD L D ++RC T NCT++CP+G+ KAI ++K L+ + Sbjct: 198 HRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTEACPRGIQVTKAIQEVKRALMFAR 256 >gi|242049094|ref|XP_002462291.1| hypothetical protein SORBIDRAFT_02g023310 [Sorghum bicolor] gi|241925668|gb|EER98812.1| hypothetical protein SORBIDRAFT_02g023310 [Sorghum bicolor] Length = 313 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 134/253 (52%), Positives = 173/253 (68%), Gaps = 13/253 (5%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +KE+++YRWNPD+ G P + +Y VDL +CGPMVLD L IK + D TL R Sbjct: 60 RDGRATTTVKEFQVYRWNPDSPAGRPFLQSYLVDLASCGPMVLDVLQKIKAEQDSTLAFR 119 Query: 78 RSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC M+IDG NT+AC+K D V PLPHM V+KDLVVD+++FY Q+ Sbjct: 120 RSCREGICGSCSMSIDGVNTVACLKPVDADTSRPSMVTPLPHMYVVKDLVVDLTNFYQQY 179 Query: 137 RSIEPWLKTVS----------PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 RS+EPWLKT +E LQS R+K+DGLYEC++CACCST+CPSYWWN Sbjct: 180 RSVEPWLKTKRRASSASEGEATTTRREHLQSPAQRKKLDGLYECILCACCSTACPSYWWN 239 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 S+ +LGPA LL AYRW+ DSRD++ ER+ +L E ++YRC I +CT +CPK L+PA Sbjct: 240 SEAFLGPAALLHAYRWVSDSRDDYGRERIQSLSEGWDKMYRCRMIKSCTATCPKSLDPAA 299 Query: 246 AIAKIKMMLLDRK 258 AI+ +K + RK Sbjct: 300 AISAMKALHQLRK 312 >gi|323498094|ref|ZP_08103098.1| fumarate reductase iron-sulfur subunit [Vibrio sinaloensis DSM 21326] gi|323316805|gb|EGA69812.1| fumarate reductase iron-sulfur subunit [Vibrio sinaloensis DSM 21326] Length = 254 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D LD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVEILRYDPEKDAEPHFQTFEVPFDET-MSTLDALGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGANLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C+ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKSERMALINGENGAWGCTFVGYCSDVCPKNVDPAAAVNQGK 229 >gi|94984993|ref|YP_604357.1| succinate dehydrogenase iron-sulfur subunit [Deinococcus geothermalis DSM 11300] gi|94555274|gb|ABF45188.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Deinococcus geothermalis DSM 11300] Length = 253 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 5/231 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R++P+ Y V+ G VLD + ++K IDP+LT RRSC GICGS Sbjct: 21 INVKILRFDPEKDRKAHWKMYSVEA-QPGDRVLDVINWVKWYIDPSLTFRRSCGHGICGS 79 Query: 88 CGMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 M I+G N LAC ++D+ I V P+ + V KDL+VDM F+ +R+I P+ Sbjct: 80 DAMMINGRNRLACKTLVRDVAKDGGTITVEPIRGLKVEKDLLVDMDPFFDAYRAIMPYFI 139 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P P E LQS E +I C++CACC+TSCP +W N YLGPA ++QA+R++ Sbjct: 140 NEDPPPPAERLQSPEQIDRISHSSNCILCACCTTSCPIFWVNGS-YLGPAAIVQAHRFIF 198 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRD+ +RL+ + ++RC T NCT++CP+ + I ++K ++ Sbjct: 199 DSRDQATNQRLNIMNQNTGVWRCRTAYNCTEACPRDIPITTIIEEVKRAVM 249 >gi|226356179|ref|YP_002785919.1| succinate dehydrogenase iron-sulfur subunit [Deinococcus deserti VCD115] gi|226318169|gb|ACO46165.1| putative Succinate dehydrogenase, iron-sulfur protein [Deinococcus deserti VCD115] Length = 253 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 5/233 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +I R+NP+ DTY V V+D L IK +P+LT RRSC+ GICGS Sbjct: 22 NVKILRFNPETDKKAHWDTYQVQAQPSD-RVVDVLNDIKWYKEPSLTFRRSCQHGICGSD 80 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G N LAC ++D+ I V P+ + V +DL+VDM F+ +++I P+ Sbjct: 81 AMLINGRNRLACKTLVRDVAKDGGTITVEPIRGLKVERDLLVDMEPFFDSYKAIMPYFIN 140 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 SP PA E QS D ++++ C++CACC+TSCP +W N YLGPA ++QA+R++ D Sbjct: 141 ESPAPAGERYQSELDAERMEHSSNCILCACCTTSCPIFWVNG-AYLGPAAIVQAHRFIFD 199 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 SRDE +RL+ + ++RC T NCT++CP+ + I ++K ++ ++ Sbjct: 200 SRDEATHQRLNIMNQNTGVWRCRTAYNCTEACPRDIPITTLIEEVKRAIMFQQ 252 >gi|148976862|ref|ZP_01813517.1| succinate dehydrogenase iron-sulfur subunit [Vibrionales bacterium SWAT-3] gi|145963736|gb|EDK28996.1| succinate dehydrogenase iron-sulfur subunit [Vibrionales bacterium SWAT-3] Length = 259 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P M T+ V D VLD + YIK+ D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPEKDAEPYMQTFEVPFDET-MSVLDAIGYIKDHQDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ +DG LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVDGVPKLACKSFLRDYPNGLTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKKVDPAAAVNQGK 229 >gi|145494101|ref|XP_001433045.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400161|emb|CAK65648.1| unnamed protein product [Paramecium tetraurelia] Length = 305 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 123/240 (51%), Positives = 171/240 (71%), Gaps = 3/240 (1%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K++ IYR++P D P +YYVDL PM LD LLYIK+ D +L+LRRSC Sbjct: 57 EEKAKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYLDALLYIKDNYDSSLSLRRSC 116 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MN +G + LAC D+ + PL HM V+KDLVVDM++FY+Q+++I Sbjct: 117 REGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTI 176 Query: 140 EPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+LK +PK KE +QS EDR+ +DGLYECV+CACCSTSCPSYWW+ DRYLGPA+L+Q Sbjct: 177 DPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCSTSCPSYWWHPDRYLGPAVLMQ 236 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYRW++DSRDE+ ERL+ L + ++ C I C+ +CPKGL+P +++ + ++ + K Sbjct: 237 AYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCPKGLDPQRSMNHLMKLIEEYK 296 >gi|302558852|ref|ZP_07311194.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces griseoflavus Tu4000] gi|302476470|gb|EFL39563.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces griseoflavus Tu4000] Length = 259 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 5/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 RI R+NP+ + + + +++D VLD L IK +D TLT RRSC GICG Sbjct: 26 TVTMRIRRFNPEVSADAVWEDFQLEIDPKE-RVLDALHKIKWDLDGTLTFRRSCAHGICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S M I+G N LAC +KDI I V + ++V+KDLVVDM F+ +R + P+L Sbjct: 85 SDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVLKDLVVDMEPFFQAYRDVMPFLI 144 Query: 145 TVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T +P +E LQS EDR + D +C++CA C++SCP + WN +Y GPA ++ A+R++ Sbjct: 145 TKETNEPTRERLQSAEDRARFDDTTKCILCAACTSSCPVF-WNDGQYFGPAAIVNAHRFI 203 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE +RL+ L D ++RC T NCT +CP+G+ KAIA++K L+ R+ Sbjct: 204 FDSRDEAGEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIAEVKRALITRR 258 >gi|317508110|ref|ZP_07965794.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Segniliparus rugosus ATCC BAA-974] gi|316253621|gb|EFV13007.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Segniliparus rugosus ATCC BAA-974] Length = 267 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 142/243 (58%), Gaps = 9/243 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + RI R NP++ + V VL+ LLYIK +D TLT RR Sbjct: 24 PVPEGST-IVTVRIMRTNPEDPAANGWQDFLVPALPTD-RVLNLLLYIKGYLDGTLTFRR 81 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHF 132 SC G+CGS + ++G N LAC MKD + V P+ + V KDL+VDM F Sbjct: 82 SCAHGVCGSDAIRLNGVNRLACKVLMKDLLRKDGKPVVLTVEPIRGLPVEKDLIVDMEPF 141 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + +RS++P+L SP P KE LQS E+R + D +C++CACC+TSCP +W +Y G Sbjct: 142 FDAYRSVKPFLINESPAPEKERLQSAEERHRFDDTTKCILCACCTTSCPVFWTEG-KYHG 200 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRD+ ER++ L D + ++RC T NCT +CP+G+ KAI ++K Sbjct: 201 PAAIVNAHRFIFDSRDQAGAERMEILNDEYGVWRCRTTFNCTDACPRGIQVTKAIQEVKR 260 Query: 253 MLL 255 +L Sbjct: 261 AVL 263 >gi|145486477|ref|XP_001429245.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396336|emb|CAK61847.1| unnamed protein product [Paramecium tetraurelia] Length = 305 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 123/240 (51%), Positives = 171/240 (71%), Gaps = 3/240 (1%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K++ IYR++P D P +YYVDL PM LD LLYIK+ D +L+LRRSC Sbjct: 57 EEKAKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYLDALLYIKDNYDSSLSLRRSC 116 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MN +G + LAC D+ + PL HM V+KDLVVDM++FY+Q+++I Sbjct: 117 REGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTI 176 Query: 140 EPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+LK +PK KE +QS EDR+ +DGLYECV+CACCSTSCPSYWW+ DRYLGPA+L+Q Sbjct: 177 DPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCSTSCPSYWWHPDRYLGPAVLMQ 236 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYRW++DSRDE+ ERL+ L + ++ C I C+ +CPKGL+P +++ + ++ + K Sbjct: 237 AYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCPKGLDPQRSMNHLMKLIEEYK 296 >gi|118469821|ref|YP_886045.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium smegmatis str. MC2 155] gi|118171108|gb|ABK72004.1| succinate dehydrogenase, iron-sulfur protein [Mycobacterium smegmatis str. MC2 155] Length = 261 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 93/239 (38%), Positives = 141/239 (58%), Gaps = 9/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R+NP+N ++ V +L+ L Y+K +D TLT RRSC G+CG Sbjct: 25 MVTLKIARFNPENPDAAGWQSFRVPCLPSD-RLLNLLHYVKWYLDGTLTFRRSCAHGVCG 83 Query: 87 SCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 S M I+G N LAC M+D+ + I + P+ + V KDLVV+M F+ +R++ Sbjct: 84 SDAMRINGVNRLACKVLMRDMLPKNPNKQLTITIEPIRGLPVEKDLVVNMEPFFDAYRAV 143 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P+L T P KE +QS DR + D +C++CACC+TSCP YW Y GPA ++ A Sbjct: 144 KPFLVTSGNPPTKERIQSPTDRARYDDTTKCILCACCTTSCPVYWSEGS-YFGPAAIVNA 202 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ DSRDE ERLD L + ++RC T NCT++CP+G+ +AI ++K L+ + Sbjct: 203 HRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIQVTQAIQEVKRALMFAR 261 >gi|323494460|ref|ZP_08099566.1| fumarate reductase iron-sulfur subunit [Vibrio brasiliensis LMG 20546] gi|323311283|gb|EGA64441.1| fumarate reductase iron-sulfur subunit [Vibrio brasiliensis LMG 20546] Length = 254 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++ I R++P++ P T+ V D LD L YIK+ +D L+ R SCR IC Sbjct: 5 RIQKVEILRYDPEHDAEPHFQTFEVPFDET-MSTLDALGYIKDNLDKDLSYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P++ Sbjct: 64 GSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIG 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +Q+ E K C+ C C +CP + N ++GPA L A+R+ + Sbjct: 124 NDRKPEDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 183 DSRDNGKAERMALINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|319760462|ref|YP_004124400.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Blochmannia vafer str. BVAF] gi|318039176|gb|ADV33726.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Blochmannia vafer str. BVAF] Length = 241 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 158/235 (67%), Gaps = 6/235 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ IYR+ P+ P M + ++L N M L L + DPTLT RRSCREG+CGS Sbjct: 3 IKFSIYRFCPELNKVPYMQEFQINLINIYRMTLLDALIQLKEHDPTLTFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 GMNI+GTN LAC+ ++ + I + PLP VI+DLVVDMS FY Q++ I P+ Sbjct: 63 DGMNINGTNNLACITSLTELINRNPQKKIIIRPLPGFPVIRDLVVDMSQFYLQYQKINPY 122 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 L KP+ E LQS EDR K+DG YEC++CACCS+SCPS+WWNSD+++GPA LL YR Sbjct: 123 LINKDINKPSHEYLQSPEDRAKLDGSYECILCACCSSSCPSFWWNSDKFIGPAGLLTLYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +L+D+RD ERL L+D F ++RCH IMNC CPK LNPA+AI KIK ML+ Sbjct: 183 FLVDTRDTHSKERLKELQDSFSVFRCHNIMNCVSVCPKKLNPAQAIGKIKRMLVK 237 >gi|1706424|sp|P51053|DHSB_COXBU RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|495756|gb|AAA74134.1| succinate dehydrogenase [Coxiella burnetii] Length = 235 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 155/229 (67%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R+NP+ P M + +D+ +L L + P + LRRSC EG+CGS Sbjct: 2 TFSIMRFNPETDKKPYMQDFELDVSAIQGKMLLNALEALREKHPDIGLRRSCAEGVCGSD 61 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GMNI+G N LACV +KD+ + V PLP +I+DL+VDM FY+Q++ ++P+L Sbjct: 62 GMNINGKNALACVTQLKDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYLLNDQE 121 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P KE LQS E+R K+DGLYEC++CACCS+SCPSYWWN D+++GPA LL +YR++ DSRD Sbjct: 122 APQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYRFIADSRD 181 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ERLD ++DP+ ++RC TIM+C CPK LNPAKAI KI+ +L Sbjct: 182 SKEKERLDAMKDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRTEMLQE 230 >gi|262201718|ref|YP_003272926.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gordonia bronchialis DSM 43247] gi|262085065|gb|ACY21033.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gordonia bronchialis DSM 43247] Length = 262 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 144/240 (60%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + +I+R+NP++ +++ V +L+ LLY+K +D TLT RRSC Sbjct: 22 DEATMVTLKIFRFNPEDPDAQGYESFRVPALPTD-RLLNLLLYVKGYLDGTLTFRRSCAH 80 Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-------KGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M ++G N LAC MKD+ + I + P+ + V KDLVV+M F+ Sbjct: 81 GVCGSDAMRVNGVNRLACKLLMKDMLPKDKSKEITITIEPIKGLPVEKDLVVNMEPFFDA 140 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T +P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 141 YRAIKPFLITSGNEPTRERIQSATDRARFDDTTKCILCACCTTSCPVFWNEGS-YFGPAA 199 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L D ++RC T NCT +CP+G+ +AI ++K L+ Sbjct: 200 IVNAHRFIFDSRDEGAVERLDILNDVDGVWRCRTTFNCTDACPRGIQVTQAIQEVKRALM 259 >gi|110776988|ref|XP_001122922.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like, partial [Apis mellifera] Length = 252 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 113/221 (51%), Positives = 150/221 (67%), Gaps = 5/221 (2%) Query: 24 EKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNC-GPMVLDGLLYIKNKIDPTLTLRRSCR 81 + L+ R+YRWNP+ P M + VDL+ C G MVLD L IK + DPTL+ R+SCR Sbjct: 32 KPRLQTIRVYRWNPEKPNVKPYMQQFSVDLNKCTGTMVLDVLALIKAEYDPTLSYRKSCR 91 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EGICG C MNI+G N LAC+ + I +YPLPH VI+DLV D+ + Q+++IEP Sbjct: 92 EGICGCCAMNINGVNNLACITKALESSKPIVIYPLPHSYVIRDLVTDLEQYLKQYKNIEP 151 Query: 142 WLKTVSPKP---AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +LK +++LQS DR K++GLYEC++C CC+ +CP YWW D++LGP+ LLQ Sbjct: 152 FLKRTGEDNYVGLRQILQSPRDRDKLNGLYECILCGCCTFACPPYWWLGDKFLGPSTLLQ 211 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 AYRW+IDSRD ERL L D + +YRCHTI NCT++CPK Sbjct: 212 AYRWIIDSRDMGHKERLTKLRDYYSVYRCHTIFNCTKTCPK 252 >gi|15790348|ref|NP_280172.1| hypothetical protein VNG1308G [Halobacterium sp. NRC-1] gi|169236081|ref|YP_001689281.1| succinate dehydrogenase subunit B (iron-sulfur protein) [Halobacterium salinarum R1] gi|10580826|gb|AAG19652.1| succinate dehydrogenase subunit B [Halobacterium sp. NRC-1] gi|167727147|emb|CAP13933.1| succinate dehydrogenase subunit B (iron-sulfur protein) [Halobacterium salinarum R1] Length = 292 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 135/242 (55%), Gaps = 8/242 (3%) Query: 24 EKNLKEYRIYRWNPDN--KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + E +++R++P+ K P DT+ V + G VLD L++ ++ D +LT R SCR Sbjct: 50 DGETVELKVFRYDPEIAGKEEPRFDTFTVPFE-TGMTVLDALIFARDSYDSSLTFRHSCR 108 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + +CGS ++G+ L C ++D++ + V PLPH V+KDLVV+M HFY Q S++P Sbjct: 109 QAVCGSDAFFVNGSQRLGCQTQIEDLEWPVRVEPLPHSDVVKDLVVEMDHFYDQMESVDP 168 Query: 142 WLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + +E QS ++R+ I C+ C C +SC + ++YLGPA + +A Sbjct: 169 FFDPDDLPDGELEEQRQSRQNRENIKLSTRCIWCGACMSSC-NIAAGDNKYLGPAAINKA 227 Query: 200 YRWLIDSRD--EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 YR+ +D R+ E + ERL+ +E ++RC T +CT CPK + + I ++K + Sbjct: 228 YRFYMDDREGSEKRQERLEIIEQEHGVWRCQTQFSCTDVCPKDIPLTEHIQELKREAVKE 287 Query: 258 KI 259 + Sbjct: 288 NL 289 >gi|284164223|ref|YP_003402502.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haloterrigena turkmenica DSM 5511] gi|284013878|gb|ADB59829.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haloterrigena turkmenica DSM 5511] Length = 293 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 14/265 (5%) Query: 7 PKRSRVKRG-----KIWNAPTGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMV 59 P + K+G + E +++R++P+ +G P D ++V + G V Sbjct: 28 PVDEKEKQGGDIDQQTTPEDELEGETVHIKVFRYDPEVEGKQEPRFDDFHVPFEK-GMTV 86 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD ++Y ++ D +LT R SCR+ +CGS ++G L C + D++ I + PLPH Sbjct: 87 LDAVMYARDTYDSSLTFRHSCRQAVCGSDAFFVNGKQRLGCKTQIADLEQPIRIEPLPHQ 146 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA---KELLQSHEDRQKIDGLYECVMCACC 176 V+KDLVVDM HFY Q ++EP+ + +E QS E+R+KI C+ C C Sbjct: 147 EVVKDLVVDMDHFYDQMHTVEPYFQDEDTPNPADLEEQRQSPENREKIKMSSRCIWCGAC 206 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCT 234 +SC + + YLGPA + +AY++ +D R +E + RL LE ++RC T +CT Sbjct: 207 MSSC-NIAAGDNDYLGPAAINKAYKFAMDDREGEEIKEHRLRILEQEHGVWRCQTQFSCT 265 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRKI 259 + CPK + + I ++K + + + Sbjct: 266 EVCPKDIPLTEHIQELKREAVKKNL 290 >gi|11466184|ref|NP_066507.1| succinate:cytochrome c oxidoreductase subunit 2 [Naegleria gruberi] gi|10444219|gb|AAG17785.1|AF288092_10 succinate:cytochrome c oxidoreductase subunit 2 [Naegleria gruberi] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 123/256 (48%), Positives = 162/256 (63%), Gaps = 25/256 (9%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 P L +Y+++R++P P + Y++ + M+LD L Y+KN+ D +L+ RRSC Sbjct: 7 PVDSNALIQYKVFRYDPFINSEPWVQLYFISNEAHSSMLLDNLFYLKNEKDESLSYRRSC 66 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDI----KGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 REGICGSC MNI+G N LAC+ MK+ + ++PLPHM V+KDL+V M HFY Q+ Sbjct: 67 REGICGSCAMNINGENALACLYIMKEHLNVLNNEVRIFPLPHMPVVKDLIVCMKHFYLQY 126 Query: 137 RSIEPWLKTVSPKPAKELL---------------------QSHEDRQKIDGLYECVMCAC 175 +SI P+L S L DR ++GLYEC++CAC Sbjct: 127 KSINPFLLKNSISYVSSYLTTKLLTLGFNTSMLLTLPKKENIQFDRYLLNGLYECILCAC 186 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 CSTSCPSYWWN DRYLGPAILLQ+YRWLIDSRD+F RL L+D +++ RCH+I+NC Sbjct: 187 CSTSCPSYWWNKDRYLGPAILLQSYRWLIDSRDDFFFSRLGQLDDVYKVGRCHSILNCVS 246 Query: 236 SCPKGLNPAKAIAKIK 251 CPKGLNPA+AI IK Sbjct: 247 CCPKGLNPAEAINNIK 262 >gi|320333904|ref|YP_004170615.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Deinococcus maricopensis DSM 21211] gi|319755193|gb|ADV66950.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Deinococcus maricopensis DSM 21211] Length = 235 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 5/231 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R++P+ T+ V+ G VLD L Y+K D TLT RRSC GICGS Sbjct: 3 INVKILRFDPERDKKQHWQTFSVEA-QPGDRVLDVLNYVKWYEDSTLTFRRSCAHGICGS 61 Query: 88 CGMNIDGTNTLACVK---DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 M I+G N LAC D+ G I V P+ + V KDL+ DM F+ +R++ P+ Sbjct: 62 DAMLINGRNRLACKTLLQDVAKDGGTITVEPIRGLKVEKDLLTDMEPFFDAYRAVMPYFV 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P P E +QS ED +++D C++CACC+TSCP +W N YLGPA ++QA+R++ Sbjct: 122 NDEPPPPGERIQSIEDSERMDHSSNCILCACCTTSCPIFWVNGR-YLGPAAIVQAHRFIF 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRD+ RL+ L ++RC T NCT++CP+ + + I ++K ++ Sbjct: 181 DSRDKAANARLNILNQNTGVWRCRTAYNCTEACPRDIPITQLIEEVKRAVM 231 >gi|229527418|ref|ZP_04416810.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae 12129(1)] gi|229335050|gb|EEO00535.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae 12129(1)] Length = 252 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R++P N P M + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SAQRIQKVDILRYDPANDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E + C+ C C +CP + N +LGPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMARYKQFAGCINCGLCYAACPQFGLNP-EFLGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|307191270|gb|EFN74917.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Camponotus floridanus] Length = 243 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 123/214 (57%), Positives = 150/214 (70%), Gaps = 3/214 (1%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 M + VDL+ CG MVLD L IK + DPTL+ RRSCREGICG C MNIDG NTLAC+ + Sbjct: 1 MQQFSVDLNKCGTMVLDVLELIKAQHDPTLSYRRSCREGICGCCAMNIDGVNTLACITKV 60 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE---DR 161 K+ + +YPLPH VI+DLV DM F Q R I+P+LK + Q + DR Sbjct: 61 KESPQPLVIYPLPHAYVIRDLVPDMEQFLEQFRQIDPYLKRPGEDNFLGMRQILQSPRDR 120 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 K+DGLYEC+MCACC+ SCP YWW D+YLGPA+LLQAYRW+IDSRD ERL L D Sbjct: 121 SKLDGLYECIMCACCTYSCPPYWWLGDKYLGPAVLLQAYRWVIDSRDMAHKERLAKLRDF 180 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +YRC TI NCT++CPKGLNP KAIA++K +L Sbjct: 181 YSVYRCKTIFNCTKTCPKGLNPGKAIAQLKRLLA 214 >gi|226359482|ref|YP_002777259.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus opacus B4] gi|226237966|dbj|BAH48314.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus opacus B4] Length = 264 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 148/259 (57%), Gaps = 10/259 (3%) Query: 4 IMLPKRSRVKRGKIWNAPTGEKN-LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDG 62 + +P S G + P E + +I R++P++ G ++ V +L+ Sbjct: 1 MSVPMNSE-GPGSVALPPVPEGAVMVTLKIRRFSPEDPGKAGWASFEVPCLPTD-RLLNL 58 Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG------AIAVYPL 116 L Y+K +D TLT RRSC G+CGS M I+G N LAC M+DI + + PL Sbjct: 59 LTYVKGYLDGTLTFRRSCAHGVCGSDAMVINGVNRLACKVLMRDILHKDGKNTTVTIAPL 118 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 + V KDLVVDM F+S +R I+P+L T +P +E +QS DR + D +C++CACC Sbjct: 119 KGLPVEKDLVVDMEPFFSAYRQIKPFLMTSGQEPTRERIQSQADRARYDDTTKCILCACC 178 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 + SCP YW + Y GPA ++ A+R++ DSRDE GER+D L ++RC T NCT + Sbjct: 179 TESCPVYWADGS-YFGPAAIVNAHRFIFDSRDEGAGERMDILNGIDGVWRCRTTFNCTDA 237 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP+G+ +AI ++K LL Sbjct: 238 CPRGIKVTQAITEVKRTLL 256 >gi|258625684|ref|ZP_05720563.1| Fumarate reductase iron-sulfur subunit [Vibrio mimicus VM603] gi|258581922|gb|EEW06792.1| Fumarate reductase iron-sulfur subunit [Vibrio mimicus VM603] Length = 252 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R+NP P M + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SAQRIQKVDILRYNPAKDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|54633802|gb|AAV36011.1| mitochondrial succinate dehydrogenase beta subunit [Euplotes sp. BB-2004] Length = 298 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 126/237 (53%), Positives = 168/237 (70%), Gaps = 3/237 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + +K IYR NP + + P TYY++ D CGPM LD L+ +K++IDPTL+ RRSC Sbjct: 50 AEKAKMKRVDIYRSNPSDPEDIPKYVTYYINRDECGPMFLDALIKVKDEIDPTLSFRRSC 109 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 REGICGSC MN+DG + LAC+ + D + PL M V+KDLVVDM+HFY+Q++SI+ Sbjct: 110 REGICGSCAMNMDGRHHLACLCSLPDNNEKSVISPLMGMFVLKDLVVDMTHFYAQYKSID 169 Query: 141 PWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+LK +PK KE QS EDR+K+DGLYECV+CACCSTSCPSYWW+ YLGPA+L+Q Sbjct: 170 PYLKRKTPKKEGEKEYYQSIEDRKKLDGLYECVLCACCSTSCPSYWWHPQEYLGPAVLMQ 229 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYR +IDSRDE+ ERL+ + +L C+ I C+ +CPK LNP +A+ +K + L Sbjct: 230 AYRRVIDSRDEYTEERLEAIGGDMKLDECYQIGICSLACPKHLNPREALQSLKDLYL 286 >gi|15642652|ref|NP_232285.1| fumarate reductase iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590913|ref|ZP_01678235.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 2740-80] gi|121727583|ref|ZP_01680691.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae V52] gi|147673358|ref|YP_001218147.1| fumarate reductase iron-sulfur subunit [Vibrio cholerae O395] gi|153213967|ref|ZP_01949160.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 1587] gi|153819794|ref|ZP_01972461.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae NCTC 8457] gi|153821531|ref|ZP_01974198.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae B33] gi|153825083|ref|ZP_01977750.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MZO-2] gi|153829457|ref|ZP_01982124.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 623-39] gi|183179667|ref|ZP_02957878.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MZO-3] gi|227082773|ref|YP_002811324.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae M66-2] gi|229507294|ref|ZP_04396799.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae BX 330286] gi|229509782|ref|ZP_04399263.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae B33] gi|229513577|ref|ZP_04403041.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TMA 21] gi|229516907|ref|ZP_04406353.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC9] gi|229521720|ref|ZP_04411138.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TM 11079-80] gi|229524633|ref|ZP_04414038.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae bv. albensis VL426] gi|229606800|ref|YP_002877448.1| fumarate reductase iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254225397|ref|ZP_04919008.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae V51] gi|254285849|ref|ZP_04960811.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae AM-19226] gi|254851193|ref|ZP_05240543.1| fumarate reductase [Vibrio cholerae MO10] gi|255744381|ref|ZP_05418333.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholera CIRS 101] gi|262158509|ref|ZP_06029624.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae INDRE 91/1] gi|262170097|ref|ZP_06037786.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC27] gi|262190023|ref|ZP_06048324.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae CT 5369-93] gi|297581495|ref|ZP_06943418.1| fumarate reductase [Vibrio cholerae RC385] gi|298500524|ref|ZP_07010328.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MAK 757] gi|9657249|gb|AAF95798.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547235|gb|EAX57359.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 2740-80] gi|121630074|gb|EAX62479.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae V52] gi|124115537|gb|EAY34357.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 1587] gi|125622031|gb|EAZ50354.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae V51] gi|126509655|gb|EAZ72249.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae NCTC 8457] gi|126520916|gb|EAZ78139.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae B33] gi|146315241|gb|ABQ19780.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae O395] gi|148875040|gb|EDL73175.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae 623-39] gi|149741229|gb|EDM55271.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MZO-2] gi|150424031|gb|EDN15970.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae AM-19226] gi|183013078|gb|EDT88378.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MZO-3] gi|227010661|gb|ACP06873.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae M66-2] gi|227014545|gb|ACP10755.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae O395] gi|229338214|gb|EEO03231.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae bv. albensis VL426] gi|229341314|gb|EEO06318.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TM 11079-80] gi|229345970|gb|EEO10942.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC9] gi|229349454|gb|EEO14410.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae TMA 21] gi|229353256|gb|EEO18195.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae B33] gi|229354799|gb|EEO19720.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae BX 330286] gi|229369455|gb|ACQ59878.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae MJ-1236] gi|254846898|gb|EET25312.1| fumarate reductase [Vibrio cholerae MO10] gi|255737906|gb|EET93299.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholera CIRS 101] gi|262021505|gb|EEY40217.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae RC27] gi|262029670|gb|EEY48319.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae INDRE 91/1] gi|262034093|gb|EEY52532.1| succinate dehydrogenase iron-sulfur protein [Vibrio cholerae CT 5369-93] gi|297534333|gb|EFH73171.1| fumarate reductase [Vibrio cholerae RC385] gi|297540693|gb|EFH76750.1| fumarate reductase, iron-sulfur protein [Vibrio cholerae MAK 757] gi|327485131|gb|AEA79538.1| Succinate dehydrogenase iron-sulfur protein [Vibrio cholerae LMA3894-4] Length = 252 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R++P N P M + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SAQRIQKVDILRYDPANDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E + C+ C C +CP + N +LGPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMARYKQFAGCINCGLCYAACPQFGLNP-EFLGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|258620471|ref|ZP_05715509.1| Fumarate reductase iron-sulfur subunit [Vibrio mimicus VM573] gi|261211223|ref|ZP_05925512.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC341] gi|262170410|ref|ZP_06038088.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus MB-451] gi|258587350|gb|EEW12061.1| Fumarate reductase iron-sulfur subunit [Vibrio mimicus VM573] gi|260839724|gb|EEX66335.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC341] gi|261891486|gb|EEY37472.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus MB-451] Length = 252 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R++P P M + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SAQRIQKVDILRYDPAKDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|269962497|ref|ZP_06176846.1| Fumarate reductase iron-sulfur subunit [Vibrio harveyi 1DA3] gi|269832793|gb|EEZ86903.1| Fumarate reductase iron-sulfur subunit [Vibrio harveyi 1DA3] Length = 252 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPEKDAEPYTQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPNGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|262166670|ref|ZP_06034407.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus VM223] gi|262401941|ref|ZP_06078506.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC586] gi|262026386|gb|EEY45054.1| succinate dehydrogenase iron-sulfur protein [Vibrio mimicus VM223] gi|262351913|gb|EEZ01044.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. RC586] Length = 252 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R++P P M + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SAQRIQKVDILRYDPAKDAEPHMQRFEVPFDET-MSVLDAIGYVKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|86147219|ref|ZP_01065534.1| succinate dehydrogenase [Vibrio sp. MED222] gi|218708309|ref|YP_002415930.1| fumarate reductase iron-sulfur subunit [Vibrio splendidus LGP32] gi|85834934|gb|EAQ53077.1| succinate dehydrogenase [Vibrio sp. MED222] gi|218321328|emb|CAV17278.1| Fumarate reductase iron-sulfur protein [Vibrio splendidus LGP32] Length = 254 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P++ P T+ V D VLD + YIK+ +D L+ R SCR Sbjct: 2 SANRIQKIEILRYDPEHDAEPHFQTFEVPFDET-MSVLDAIGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ +DG LAC ++D + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVDGVPKLACKSFLRDYPNGFKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALALAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C+ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGDNGAWGCTFVGYCSDVCPKKVDPAAAVNQGK 229 >gi|325283226|ref|YP_004255767.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Deinococcus proteolyticus MRP] gi|324315035|gb|ADY26150.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Deinococcus proteolyticus MRP] Length = 235 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 87/231 (37%), Positives = 134/231 (58%), Gaps = 5/231 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +I R++P+ + Y +++ VLD L +K D TL RRSC GICGS Sbjct: 3 ITVKILRFDPEKDKKQHWENYALEVAPTD-RVLDILHQVKWFQDTTLNFRRSCGHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 M I+G N LAC +D+ ++V P+ + V+KDLVVDM F+ +++I P+ Sbjct: 62 DAMLINGRNRLACKTLARDVVKEGGTLSVEPIRGLKVVKDLVVDMEPFFDSYKAIMPFFV 121 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 SP PA+E LQS E + + C++CACC+TSCP +W N YLGPA ++QA+R++ Sbjct: 122 NESPAPARERLQSPEHAELMAHSSNCILCACCTTSCPIFWANGS-YLGPASIVQAHRFIF 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSRDE +RL + ++RC T NCT++CP+ + + I ++K ++ Sbjct: 181 DSRDEATQQRLGLMNQNTGVWRCRTAYNCTEACPREIPITELIEQVKRSVM 231 >gi|183981222|ref|YP_001849513.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium marinum M] gi|183174548|gb|ACC39658.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium marinum M] Length = 270 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 140/240 (58%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD+ ++ V +L+ L+YIK +D TLT RRSC Sbjct: 30 MVTVKIARFNPDDPEAFASTGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 88 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M+D + + V P+ + V KDLVVDM F+ Sbjct: 89 GVCGSDAMRINGVNRLACKVLMRDLLPKKPGKQLTLTVEPIRGLPVEKDLVVDMEPFFDA 148 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+++P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 149 YRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWNEGS-YFGPAA 207 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT++CP+G+ KAI ++K LL Sbjct: 208 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIEVTKAIQEVKRALL 267 >gi|260772049|ref|ZP_05880966.1| succinate dehydrogenase iron-sulfur protein [Vibrio metschnikovii CIP 69.14] gi|260612916|gb|EEX38118.1| succinate dehydrogenase iron-sulfur protein [Vibrio metschnikovii CIP 69.14] Length = 252 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P + + + D+ VLD L YIK+ +D L R SCR Sbjct: 2 AADRIQKVDILRYDPEQDAKPHLQAFEIPFDDT-MSVLDALGYIKDNVDKDLAYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + ++ KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPNGVKIEPLANFAIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E + C+ C C +CP + NS ++GPA L A+R Sbjct: 121 IIGNDRTPEDGANLQTPEQMARYKQFAGCINCGLCYAACPQFGLNS-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|269103621|ref|ZP_06156318.1| succinate dehydrogenase iron-sulfur protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163519|gb|EEZ42015.1| succinate dehydrogenase iron-sulfur protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 246 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +++ I R++P++ P ++T+ V + VLD L YIK+ +D L R SCR Sbjct: 2 ADNRIQKVDILRYDPEHDAEPYLETFEVPFNET-MSVLDALGYIKDNLDKDLAYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC +++ + + PL + ++ KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLREYPEGLKIEPLANFAIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNGRTPEDGPNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD ER++ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGSQERMELINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|84386959|ref|ZP_00989983.1| succinate dehydrogenase [Vibrio splendidus 12B01] gi|84378249|gb|EAP95108.1| succinate dehydrogenase [Vibrio splendidus 12B01] Length = 254 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P++ P T+ V D VLD + YIK+ +D L+ R SCR Sbjct: 2 SANRIQKIEILRYDPEHDAEPHFQTFEVPFDET-MSVLDAIGYIKDNLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ +DG LAC ++D + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVDGVPKLACKSFLRDYPNGFKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALALAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C+ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGDNGAWGCTFVGYCSDVCPKKVDPAAAVNQGK 229 >gi|91228403|ref|ZP_01262329.1| succinate dehydrogenase [Vibrio alginolyticus 12G01] gi|254230271|ref|ZP_04923661.1| fumarate reductase iron-sulfur protein [Vibrio sp. Ex25] gi|262393010|ref|YP_003284864.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|269966841|ref|ZP_06180914.1| Fumarate reductase iron-sulfur subunit [Vibrio alginolyticus 40B] gi|91188044|gb|EAS74350.1| succinate dehydrogenase [Vibrio alginolyticus 12G01] gi|151937208|gb|EDN56076.1| fumarate reductase iron-sulfur protein [Vibrio sp. Ex25] gi|262336604|gb|ACY50399.1| succinate dehydrogenase iron-sulfur protein [Vibrio sp. Ex25] gi|269828508|gb|EEZ82769.1| Fumarate reductase iron-sulfur subunit [Vibrio alginolyticus 40B] Length = 252 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPEKDAEPYKQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPDGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|55377911|ref|YP_135761.1| succinate dehydrogenase iron-sulfur protein subunit [Haloarcula marismortui ATCC 43049] gi|55230636|gb|AAV46055.1| succinate dehydrogenase iron-sulfur protein subunit [Haloarcula marismortui ATCC 43049] Length = 295 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 133/243 (54%), Gaps = 8/243 (3%) Query: 23 GEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + +++R++P+ +G P D + V + G +LD L+Y ++ D +LT R SC Sbjct: 52 DDDDTITLKVFRYDPEVEGKQEPRFDDFRVPF-HKGMTILDALIYARDHYDSSLTFRHSC 110 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 R+ +CGS + ++G L C + +++ + + PLPH V+KDLVVDM HFY Q ++E Sbjct: 111 RQAVCGSDALFVNGRQRLGCKTQISELEDPVRIEPLPHQEVVKDLVVDMEHFYDQMEAVE 170 Query: 141 PWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+ K E Q+ E+R+K+ C+ C C +SC + + YLGPA + + Sbjct: 171 PYFDADETPDDKLEEQRQTRENREKVKMSTRCIWCGACMSSC-NIAAGDNEYLGPAAINK 229 Query: 199 AYRWLIDSRDE--FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 AYR+ +D R+ + ERL +E ++RC T +CT+ CPK + + I ++K + Sbjct: 230 AYRFAMDEREGENRKQERLRIIEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAVK 289 Query: 257 RKI 259 + Sbjct: 290 NNL 292 >gi|296168858|ref|ZP_06850530.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896475|gb|EFG76125.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 276 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 96/248 (38%), Positives = 141/248 (56%), Gaps = 14/248 (5%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK----GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 P G L +I R+NPD ++ V +L+ L+YIK+ +D TL Sbjct: 29 PVPEGAV-LVTLKIARFNPDQPDAIAETGGWQSFRVPCLPSD-RLLNLLIYIKSYLDGTL 86 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVV 127 T RRSC G+CGS M I+G N LAC M+D + I V P+ + V KDLVV Sbjct: 87 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKAGKQLTITVEPIRGLPVEKDLVV 146 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 +M F+ +R+++P+L T P +E +QS DR + D +C++CA C+TSCP +W Sbjct: 147 NMEPFFDAYRAVKPYLVTTGNPPTRERIQSPTDRARYDDTTKCILCAACTTSCPVFWHEG 206 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 Y GPA ++ A+R++ DSRDE ERLD L + ++RC T NCT++CP+G+ KAI Sbjct: 207 S-YYGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIQVTKAI 265 Query: 248 AKIKMMLL 255 ++K L+ Sbjct: 266 QEVKRALM 273 >gi|28899615|ref|NP_799220.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|153838007|ref|ZP_01990674.1| fumarate reductase iron-sulfur protein [Vibrio parahaemolyticus AQ3810] gi|260361268|ref|ZP_05774376.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|260876644|ref|ZP_05888999.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|260898084|ref|ZP_05906580.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|260902327|ref|ZP_05910722.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|28807867|dbj|BAC61104.1| fumarate reductase, iron-sulfur protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748615|gb|EDM59474.1| fumarate reductase iron-sulfur protein [Vibrio parahaemolyticus AQ3810] gi|308085821|gb|EFO35516.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|308094006|gb|EFO43701.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|308110958|gb|EFO48498.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|308114237|gb|EFO51777.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|328472259|gb|EGF43129.1| fumarate reductase iron-sulfur subunit [Vibrio parahaemolyticus 10329] Length = 246 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPEKDAEPYKQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPDGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|194689940|gb|ACF79054.1| unknown [Zea mays] Length = 202 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 2/202 (0%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117 MVLD LL IKN+ DP+LT RRSCREGICGSC MNIDG N LAC+ + A V PLP Sbjct: 1 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLP 60 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCAC 175 HM VIKDLVVDM++FY+Q++S+EPWLK P P KE+ Q+ DR K+DG+YEC++CAC Sbjct: 61 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPPQLGKEVPQTKADRAKLDGMYECILCAC 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 CSTSCPSYWWN + YLGPA LL A RW+ DSRD+F ERLD + D F+LYRCHTI NCT Sbjct: 121 CSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLDAINDEFKLYRCHTIKNCTH 180 Query: 236 SCPKGLNPAKAIAKIKMMLLDR 257 +CPKGLNPAK I IK + LD Sbjct: 181 ACPKGLNPAKQIDTIKKLQLDA 202 >gi|153834932|ref|ZP_01987599.1| fumarate reductase iron-sulfur protein [Vibrio harveyi HY01] gi|148868612|gb|EDL67698.1| fumarate reductase iron-sulfur protein [Vibrio harveyi HY01] Length = 252 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SSNRIQKVDILRYDPEKDAEPYTQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPNGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKSVDPAAAVNQGK 229 >gi|118617055|ref|YP_905387.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium ulcerans Agy99] gi|118569165|gb|ABL03916.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium ulcerans Agy99] Length = 268 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 141/240 (58%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD+ ++ V +L+ L+YIK +D TLT RRSC Sbjct: 28 MVTVKIARYNPDDPEAFASTGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 86 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M+D + + V P+ + V KDLVVDM F+ Sbjct: 87 GVCGSDAMRINGVNRLACKVLMRDLLPKKSGKQLTLTVEPIRGLPVEKDLVVDMEPFFDA 146 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+++P+L T P +E +QS DR + D +C++CACC+TSCP +W YLGPA Sbjct: 147 YRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWNEGS-YLGPAA 205 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ER+D L + ++RC T NCT++CP+G+ KAI ++K LL Sbjct: 206 IVNAHRFIFDSRDEAAAERVDILNEVDGVWRCRTTFNCTEACPRGIEATKAIQEVKRALL 265 >gi|260770860|ref|ZP_05879789.1| succinate dehydrogenase iron-sulfur protein [Vibrio furnissii CIP 102972] gi|260614097|gb|EEX39287.1| succinate dehydrogenase iron-sulfur protein [Vibrio furnissii CIP 102972] gi|315178903|gb|ADT85817.1| fumarate reductase iron-sulfur subunit [Vibrio furnissii NCTC 11218] Length = 246 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P P + + V D VLD + Y+K+ +D L+ R SCR Sbjct: 2 SANRIQKVEILRYDPAKDAEPHLQAFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDMS F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPDGVKIEPLANFPIEKDLIVDMSPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGANGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|262273030|ref|ZP_06050849.1| succinate dehydrogenase iron-sulfur protein [Grimontia hollisae CIP 101886] gi|262222940|gb|EEY74246.1| succinate dehydrogenase iron-sulfur protein [Grimontia hollisae CIP 101886] Length = 251 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P P + T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVSILRYDPSKDDEPRLQTFDVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNKVPKLACKAFLRDYPDGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ E + C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRTPEDGPNNQTPEQLARYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGAEERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|27364669|ref|NP_760197.1| fumarate reductase iron-sulfur subunit [Vibrio vulnificus CMCP6] gi|37681282|ref|NP_935891.1| fumarate reductase iron-sulfur subunit [Vibrio vulnificus YJ016] gi|320155064|ref|YP_004187443.1| succinate dehydrogenase flavoprotein subunit [Vibrio vulnificus MO6-24/O] gi|27360814|gb|AAO09724.1| Succinate dehydrogenase iron-sulfur protein [Vibrio vulnificus CMCP6] gi|37200033|dbj|BAC95862.1| fumarate reductase, iron-sulfur protein [Vibrio vulnificus YJ016] gi|319930376|gb|ADV85240.1| succinate dehydrogenase flavoprotein subunit [Vibrio vulnificus MO6-24/O] Length = 252 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P P + V D VLD L Y+K+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPATDAEPRFQAFEVPFDET-MSVLDALGYVKDHLDKNLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++G LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNGVPKLACKSFLRDYPDGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQLAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKAERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGK 229 >gi|307107565|gb|EFN55807.1| hypothetical protein CHLNCDRAFT_22638 [Chlorella variabilis] Length = 212 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 129/201 (64%), Positives = 161/201 (80%), Gaps = 2/201 (0%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-A 112 CGPM+LD LL IK++ D TL+LRRSCREGICGSC MN+DGTN LAC+ + + Sbjct: 4 RCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNMDGTNGLACLTKVDRDASKVSR 63 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECV 171 + PLPHM V+KDLVVDM++FY+Q++ I+P+L+T P KE LQ+ EDR K+DGLYEC+ Sbjct: 64 IAPLPHMFVVKDLVVDMANFYAQYKHIQPYLQTTKPKPDGKEFLQTKEDRAKLDGLYECI 123 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 +CACCSTSCPSYWWNSD+YLGPA+LL AYRW+IDSRD+F ERL N+ D ++LYRCHTI Sbjct: 124 LCACCSTSCPSYWWNSDKYLGPAVLLAAYRWIIDSRDDFTEERLRNVNDQWKLYRCHTIG 183 Query: 232 NCTQSCPKGLNPAKAIAKIKM 252 NC+ CPKGL+P+KAI KIK Sbjct: 184 NCSVVCPKGLSPSKAITKIKQ 204 >gi|222480400|ref|YP_002566637.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halorubrum lacusprofundi ATCC 49239] gi|222453302|gb|ACM57567.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halorubrum lacusprofundi ATCC 49239] Length = 296 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 138/239 (57%), Gaps = 8/239 (3%) Query: 27 LKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 E +++R++P+ +G P DT++V G VLD L+Y ++ D +LT R SCR+ + Sbjct: 57 TVELKVFRYDPEIEGKQEPRFDTFHVPFTK-GMTVLDALMYSRDTYDSSLTFRHSCRQAV 115 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS M ++G LAC + D++ I V PLPH V KDLVVD+ HFY Q ++EP+ + Sbjct: 116 CGSDAMFVNGGQKLACKTQIADLEQPIRVEPLPHAEVEKDLVVDLEHFYDQMEAVEPYFQ 175 Query: 145 TVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 T +E Q+ E+R+KI C+ C+ C +SC + + YLGPA + +AYR+ Sbjct: 176 TNEYPDGELEEQRQTRENREKIKMSTRCIWCSACMSSC-NIAAGDNEYLGPAAINKAYRF 234 Query: 203 LIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D R +E + +RL+ +E ++RC T +CT+ CPK + + I ++K + + Sbjct: 235 AMDEREGEEIKQKRLEIIEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAVKNNL 293 >gi|46143535|ref|ZP_00135022.2| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208992|ref|YP_001054217.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae L20] gi|190150858|ref|YP_001969383.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251001|ref|ZP_07337189.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253394|ref|ZP_07339537.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246446|ref|ZP_07528519.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248571|ref|ZP_07530586.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253183|ref|ZP_07535059.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255429|ref|ZP_07537236.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257598|ref|ZP_07539358.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259881|ref|ZP_07541595.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262011|ref|ZP_07543666.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264208|ref|ZP_07545799.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097784|gb|ABN74612.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915989|gb|ACE62241.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647739|gb|EFL77952.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650158|gb|EFL80326.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852650|gb|EFM84882.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854921|gb|EFM87109.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859327|gb|EFM91364.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861613|gb|EFM93600.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863901|gb|EFM95824.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866051|gb|EFM97925.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868294|gb|EFN00116.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870454|gb|EFN02207.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 244 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P +D Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPETDSEPHLDKYEVPFD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVIDNKA 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 186 NGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGK 228 >gi|322513265|ref|ZP_08066389.1| fumarate reductase subunit B [Actinobacillus ureae ATCC 25976] gi|322120972|gb|EFX92819.1| fumarate reductase subunit B [Actinobacillus ureae ATCC 25976] Length = 244 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 2/226 (0%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N + R+NP+ P +D Y V D +LD L YIK++++P L+ R SCR IC Sbjct: 5 NKMTIEVLRYNPETDSEPHLDKYEVPFD-SQTSLLDVLGYIKDELEPELSYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 64 GSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVID 123 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D Sbjct: 124 NKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLD 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +RD + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 183 NRDNGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGK 228 >gi|254820243|ref|ZP_05225244.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium intracellulare ATCC 13950] Length = 265 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNK----GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD ++ V M L+ L+YIK+ +D TLT RRSC Sbjct: 25 MVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRM-LNLLIYIKSYLDGTLTFRRSCAH 83 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M+D I V P+ + V KDLVVDM F+ Sbjct: 84 GVCGSDAMRINGVNRLACKVLMRDLLPKKAGKPLTITVEPIRGLPVEKDLVVDMEPFFDA 143 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+++P+L T P +E +QS DR + D +C++CA C+TSCP +W Y GPA Sbjct: 144 YRAVKPYLITTGNPPTRERIQSPTDRARYDDTTKCILCAACTTSCPIFWHEGS-YYGPAA 202 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT++CP+G+ KAI ++K ++ Sbjct: 203 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIQITKAIQEVKRAIM 262 >gi|332295050|ref|YP_004436973.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermodesulfobium narugense DSM 14796] gi|332178153|gb|AEE13842.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermodesulfobium narugense DSM 14796] Length = 236 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 4/235 (1%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NL + I+R++P+ Y V++ +LD YIKN +D TLT R SC +GI Sbjct: 2 GNLYKLTIFRYDPE-SNKTSTSKYEVEVTESHWTLLDVFRYIKNNVDDTLTFRYSCGQGI 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW- 142 CGSC + ++G + LAC MK + + V PL VI+DLVVD S + R + PW Sbjct: 61 CGSCAVTVNGKSVLACETQMKFLDSFDLVVEPLRGFPVIRDLVVDHSVLDDKVRKVMPWL 120 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + KE QS EDR K+DGLYEC++C C +CP++ W + +LGP LL A R+ Sbjct: 121 VCKKDSESDKERFQSVEDRAKLDGLYECIICGSCVAACPTF-WKNKTFLGPQALLYACRF 179 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++DSRDE + ER + L D +Y CHTI NC + CPK LNP KAI +++ M ++ Sbjct: 180 MLDSRDEGKNERFEILADKDGIYGCHTIFNCMEVCPKELNPGKAILELRKMFMNE 234 >gi|320161615|ref|YP_004174840.1| succinate dehydrogenase iron-sulfur subunit [Anaerolinea thermophila UNI-1] gi|319995469|dbj|BAJ64240.1| succinate dehydrogenase iron-sulfur subunit [Anaerolinea thermophila UNI-1] Length = 236 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 148/235 (62%), Gaps = 5/235 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + R++R++P+ P DT+ +D+D VLD L YIK DPTL LRRSC G+CGS Sbjct: 3 VKLRVFRFDPERDQKPRYDTFIMDVDPND-RVLDLLEYIKADFDPTLALRRSCAHGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M ++G N LAC +K+ I V PL + VIKDL+VDM F+ +RS+ P+L Sbjct: 62 DAMRVNGRNYLACKVLVKNLNADTITVEPLLGLRVIKDLIVDMGPFFENYRSVLPYLIND 121 Query: 147 SP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P + KE LQS E + + + +C++CA C+TSCPS+W DRY+GPA ++ A+R++ Sbjct: 122 EPLPEDGKERLQSPEQQLRFEDTTKCILCAACTTSCPSFWA-DDRYVGPAAIVNAHRFIF 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD +RL+ L + ++RC T NCT++CP+ ++ +AIA++K ++ KI Sbjct: 181 DSRDRAAEKRLNILNEQMGVWRCRTAFNCTEACPREIHITQAIAEVKKAIITGKI 235 >gi|163802723|ref|ZP_02196613.1| fumarate reductase iron-sulfur subunit [Vibrio sp. AND4] gi|159173430|gb|EDP58252.1| fumarate reductase iron-sulfur subunit [Vibrio sp. AND4] Length = 252 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R++P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYDPEKNAEPYTQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPNGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKSVDPAAAVNQGK 229 >gi|165976958|ref|YP_001652551.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877059|gb|ABY70107.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 244 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P +D Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPETDSEPHLDKYEVPFD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVIDNKA 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 SEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 186 NGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGK 228 >gi|76802767|ref|YP_330862.1| succinate dehydrogenase, subunit B (iron-sulfur protein) [Natronomonas pharaonis DSM 2160] gi|76558632|emb|CAI50224.1| succinate dehydrogenase, subunit B (iron-sulfur protein) [Natronomonas pharaonis DSM 2160] Length = 287 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 136/244 (55%), Gaps = 8/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + + +++R++P+ +G P DT+ + G VLD L+Y ++ D TLT R S Sbjct: 43 SDADETVQIKVFRYDPEVEGKKDPRFDTFEIPFTK-GMTVLDALIYARDHFDSTLTFRHS 101 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR+ ICGS + ++G L C M D++ + + PLPH V+KDLVVDM HFY Q S+ Sbjct: 102 CRQAICGSDALFVNGAQRLGCKTQMVDLEWPVRIEPLPHAEVVKDLVVDMEHFYDQMESV 161 Query: 140 EPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EP+ +T E Q+ E+R+K+ C+ C+ C +SC + + YLGPA + Sbjct: 162 EPYFQTNELPDGDLEEQRQTRENREKVKMSTRCIWCSACMSSC-NIAAGDNEYLGPAAIN 220 Query: 198 QAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +AYR+ +D R +E + RL+ +E ++RC T +CT+ CPK + + I ++K + Sbjct: 221 KAYRFAMDKREGEEMKQHRLNIIEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAV 280 Query: 256 DRKI 259 + Sbjct: 281 KNNL 284 >gi|1524301|emb|CAA68981.1| SDH subunit B-homologue; iron-sulphur protein [Natronomonas pharaonis] Length = 287 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 137/244 (56%), Gaps = 8/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + + +++R++P+ +G P DT+ + G VLD L+Y ++ D TLT R S Sbjct: 43 SDADETVQIKVFRYDPEVEGKKDPRFDTFEIPFTK-GMTVLDALIYARDHFDSTLTFRHS 101 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR+ ICGS + ++G L C M D++ + + PLPH V+KDLVVDM HFY Q S+ Sbjct: 102 CRQAICGSDALFVNGAQRLGCKTQMVDLEWPVRIEPLPHAEVVKDLVVDMEHFYDQMESV 161 Query: 140 EPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EP+ +T +E Q+ E+R+K+ C+ C+ C +SC + + YLGPA + Sbjct: 162 EPYFQTNELPDGELEEQRQTRENREKVKMSTRCIWCSACMSSC-NIAAGDNEYLGPAAIN 220 Query: 198 QAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +AYR+ +D R +E + RL+ +E ++RC T +CT+ CPK + + I ++K + Sbjct: 221 KAYRFAMDKREGEEMKQHRLNIIEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAV 280 Query: 256 DRKI 259 + Sbjct: 281 KNNL 284 >gi|257388125|ref|YP_003177898.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halomicrobium mukohataei DSM 12286] gi|257170432|gb|ACV48191.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halomicrobium mukohataei DSM 12286] Length = 295 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 132/243 (54%), Gaps = 9/243 (3%) Query: 24 EKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +++R++P+ +G P D + V + G VLD L+Y ++ D +LT R SCR Sbjct: 52 SEETITLKVFRYDPEVEGKEEPRFDDFTVPF-HKGMTVLDALIYSRDHYDSSLTFRHSCR 110 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 + +CGS + I+G LAC + D G I + PLPH V+KDLVVDM HFY Q ++E Sbjct: 111 QAVCGSDALFINGRQRLACKTQIADLDAGTIRIEPLPHQEVVKDLVVDMEHFYDQMEAVE 170 Query: 141 PWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+ + E Q E+R+KI C+ C C +SC + + YLGPA + + Sbjct: 171 PYFDADELPDDELEEQRQDRENREKIKMSTRCIWCGACMSSC-NIAAGDNEYLGPAAINK 229 Query: 199 AYRWLIDSRD--EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 AYR+ +D R+ + + ERL +E ++RC T +CT+ CPK + + I ++K + Sbjct: 230 AYRFAMDEREGEQRKQERLRIIEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAVK 289 Query: 257 RKI 259 + Sbjct: 290 NNL 292 >gi|83816118|ref|YP_444629.1| succinate dehydrogenase iron-sulfur subunit [Salinibacter ruber DSM 13855] gi|294506380|ref|YP_003570438.1| succinate dehydrogenase iron-sulfur protein [Salinibacter ruber M8] gi|83757512|gb|ABC45625.1| succinate dehydrogenase, iron-sulfur protein [Salinibacter ruber DSM 13855] gi|294342708|emb|CBH23486.1| succinate dehydrogenase iron-sulfur protein [Salinibacter ruber M8] Length = 243 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 6/236 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I R+NP+ P ++Y V D L LL++K ID TL+LR+SC G Sbjct: 2 AEMQLNLEIKRYNPEEDDEPHWESYEVPADPLD-SALSLLLHVKWHIDGTLSLRKSCAHG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKD----IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ICGS M I+G N LAC ++D I PLP V+KDL++D S F+ ++R + Sbjct: 61 ICGSDAMQINGENKLACSVLVQDLVDEDGDTITYAPLPSAPVVKDLIIDQSRFFEKYREV 120 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +PWL T P P +E QS E+ I+ +C+MC C+ +CPS W + D YLGPA +L+A Sbjct: 121 KPWLITDGPAPEREREQSPEEHAMIEDATKCIMCGACTHACPSTWADPD-YLGPAAMLKA 179 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 YR+ DSRD+ ERLD ++ P L++C+TI NC ++CPK ++ + ++ +K Sbjct: 180 YRYTFDSRDDGAEERLDVVDSPDGLWKCYTIFNCNEACPKDIDITRWLSALKRRAA 235 >gi|215428806|ref|ZP_03426725.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T92] gi|289752017|ref|ZP_06511395.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T92] gi|289692604|gb|EFD60033.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T92] Length = 264 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD+ ++ V +L+ L+YIK +D TLT RRSC Sbjct: 23 MVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M K + V P+ + V KDLVVDM F+ Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAA 200 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 201 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260 >gi|15610455|ref|NP_217836.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis H37Rv] gi|15842911|ref|NP_337948.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis CDC1551] gi|148663183|ref|YP_001284706.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis H37Ra] gi|148824523|ref|YP_001289277.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis F11] gi|215405334|ref|ZP_03417515.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis 02_1987] gi|215413199|ref|ZP_03421900.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis 94_M4241A] gi|215432284|ref|ZP_03430203.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis EAS054] gi|218755103|ref|ZP_03533899.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis GM 1503] gi|219559382|ref|ZP_03538458.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T17] gi|253800364|ref|YP_003033365.1| succinate dehydrogenase iron-sulphur protein subunit sdhB [Mycobacterium tuberculosis KZN 1435] gi|254233929|ref|ZP_04927254.1| succinate dehydrogenase (iron-sulphur protein subunit) sdhB [Mycobacterium tuberculosis C] gi|254365941|ref|ZP_04981986.1| succinate dehydrogenase (iron-sulphur protein subunit) sdhB [Mycobacterium tuberculosis str. Haarlem] gi|254552423|ref|ZP_05142870.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188369|ref|ZP_05765843.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis CPHL_A] gi|260202483|ref|ZP_05769974.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T46] gi|260206673|ref|ZP_05774164.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis K85] gi|289444903|ref|ZP_06434647.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T46] gi|289449010|ref|ZP_06438754.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis CPHL_A] gi|289555598|ref|ZP_06444808.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis KZN 605] gi|289571548|ref|ZP_06451775.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T17] gi|289576041|ref|ZP_06456268.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis K85] gi|289747138|ref|ZP_06506516.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis 02_1987] gi|289755443|ref|ZP_06514821.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis EAS054] gi|289763509|ref|ZP_06522887.1| succinate dehydrogenase (iron-sulfur protein subunit) sdhB [Mycobacterium tuberculosis GM 1503] gi|294993738|ref|ZP_06799429.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis 210] gi|297635975|ref|ZP_06953755.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 4207] gi|297732972|ref|ZP_06962090.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN R506] gi|298526796|ref|ZP_07014205.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis 94_M4241A] gi|306777650|ref|ZP_07415987.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu001] gi|306782372|ref|ZP_07420709.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu002] gi|306786194|ref|ZP_07424516.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu003] gi|306790562|ref|ZP_07428884.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu004] gi|306795083|ref|ZP_07433385.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu005] gi|306799280|ref|ZP_07437582.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu006] gi|306805129|ref|ZP_07441797.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu008] gi|306809316|ref|ZP_07445984.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu007] gi|306969418|ref|ZP_07482079.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu009] gi|306973770|ref|ZP_07486431.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu010] gi|307081480|ref|ZP_07490650.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu011] gi|307086083|ref|ZP_07495196.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu012] gi|313660304|ref|ZP_07817184.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN V2475] gi|2894229|emb|CAA17091.1| PROBABLE SUCCINATE DEHYDROGENASE (IRON-SULPHUR PROTEIN SUBUNIT) SDHB (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium tuberculosis H37Rv] gi|13883245|gb|AAK47762.1| succinate dehydrogenase, iron-sulfur protein [Mycobacterium tuberculosis CDC1551] gi|124599458|gb|EAY58562.1| succinate dehydrogenase (iron-sulphur protein subunit) sdhB [Mycobacterium tuberculosis C] gi|134151454|gb|EBA43499.1| succinate dehydrogenase (iron-sulphur protein subunit) sdhB [Mycobacterium tuberculosis str. Haarlem] gi|148507335|gb|ABQ75144.1| succinate dehydrogenase iron-sulphur protein subunit SdhB [Mycobacterium tuberculosis H37Ra] gi|148723050|gb|ABR07675.1| succinate dehydrogenase iron-sulphur protein subunit sdhB [Mycobacterium tuberculosis F11] gi|253321867|gb|ACT26470.1| succinate dehydrogenase iron-sulphur protein subunit sdhB [Mycobacterium tuberculosis KZN 1435] gi|289417822|gb|EFD15062.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T46] gi|289421968|gb|EFD19169.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis CPHL_A] gi|289440230|gb|EFD22723.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis KZN 605] gi|289540472|gb|EFD45050.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis K85] gi|289545302|gb|EFD48950.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis T17] gi|289687666|gb|EFD55154.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis 02_1987] gi|289696030|gb|EFD63459.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis EAS054] gi|289711015|gb|EFD75031.1| succinate dehydrogenase (iron-sulfur protein subunit) sdhB [Mycobacterium tuberculosis GM 1503] gi|298496590|gb|EFI31884.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis 94_M4241A] gi|308214025|gb|EFO73424.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu001] gi|308325121|gb|EFP13972.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu002] gi|308329342|gb|EFP18193.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu003] gi|308333173|gb|EFP22024.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu004] gi|308336658|gb|EFP25509.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu005] gi|308340693|gb|EFP29544.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu006] gi|308344427|gb|EFP33278.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu007] gi|308348431|gb|EFP37282.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu008] gi|308353054|gb|EFP41905.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu009] gi|308357008|gb|EFP45859.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu010] gi|308360864|gb|EFP49715.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu011] gi|308364449|gb|EFP53300.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis SUMu012] gi|323718190|gb|EGB27372.1| succinate dehydrogenase iron-sulfur subunit sdhB [Mycobacterium tuberculosis CDC1551A] gi|326902452|gb|EGE49385.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis W-148] gi|328460097|gb|AEB05520.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium tuberculosis KZN 4207] Length = 263 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD+ ++ V +L+ L+YIK +D TLT RRSC Sbjct: 23 MVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M K + V P+ + V KDLVVDM F+ Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAA 200 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 201 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260 >gi|89075325|ref|ZP_01161747.1| succinate dehydrogenase [Photobacterium sp. SKA34] gi|90581262|ref|ZP_01237059.1| succinate dehydrogenase [Vibrio angustum S14] gi|89048874|gb|EAR54443.1| succinate dehydrogenase [Photobacterium sp. SKA34] gi|90437501|gb|EAS62695.1| succinate dehydrogenase [Vibrio angustum S14] Length = 246 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++ I R++P P ++ + V + VLD L YIK+ +D L+ R SCR Sbjct: 2 SATRIQSVEILRYDPAKDAEPYLEKFEVPFNET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++G LAC ++D + + PL + ++ KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGMMVNGVPKLACKSFLRDYPNGVKIEPLANFAIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRTPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD Q ER++ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGQHERMELINGENGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 229 >gi|224991740|ref|YP_002646429.1| succinate dehydrogenase iron-sulphur protein subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|224774855|dbj|BAH27661.1| succinate dehydrogenase iron-sulphur protein subunit [Mycobacterium bovis BCG str. Tokyo 172] Length = 263 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD ++ V +L+ L+YIK +D TLT RRSC Sbjct: 23 MVTVKIARFNPDEPDAFAATGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M K + V P+ + V KDLVVDM F+ Sbjct: 82 GVCGSDTMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAA 200 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 201 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260 >gi|300711135|ref|YP_003736949.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halalkalicoccus jeotgali B3] gi|299124818|gb|ADJ15157.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halalkalicoccus jeotgali B3] Length = 293 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 8/241 (3%) Query: 25 KNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +N E +++R++P+ + P DT++V + G VLD ++Y ++ D +LT R SCR+ Sbjct: 52 ENTVEIKVFRYDPEVEEKQEPRFDTFHVPFEK-GMTVLDAVMYARDHYDSSLTFRHSCRQ 110 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGS I+G L C + ++ + + PLPH V+KDLVVDM FY Q ++EP+ Sbjct: 111 AICGSDAFFINGRQRLGCQTQIAELDTPVRIEPLPHQEVVKDLVVDMDSFYEQMEAVEPY 170 Query: 143 LKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +T + E Q+ E+R+KI C+ CA C +SC + D+YLGPA + AY Sbjct: 171 FQTNELPEDELAEQRQTRENREKIKMGTRCIWCASCMSSC-NIAAGDDQYLGPAPISMAY 229 Query: 201 RWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+ +D R ++ + RL +E ++RC T +CT CPK + + I ++K + + Sbjct: 230 RFAMDEREGEDMKEHRLRIIEQEHGVWRCQTQFSCTNVCPKDIPLTEHIQELKREAVKKN 289 Query: 259 I 259 + Sbjct: 290 L 290 >gi|31794500|ref|NP_856993.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium bovis AF2122/97] gi|121639243|ref|YP_979467.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31620096|emb|CAD95442.1| PROBABLE SUCCINATE DEHYDROGENASE (IRON-SULPHUR PROTEIN SUBUNIT) SDHB (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium bovis AF2122/97] gi|121494891|emb|CAL73374.1| Probable succinate dehydrogenase (iron-sulphur protein subunit) sdhB [Mycobacterium bovis BCG str. Pasteur 1173P2] Length = 263 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD ++ V +L+ L+YIK +D TLT RRSC Sbjct: 23 MVTVKIARFNPDEPDAFAATGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M K + V P+ + V KDLVVDM F+ Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAA 200 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 201 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260 >gi|89573809|gb|ABD77130.1| succinate dehydrogenase complex subunit B [Loxodonta africana] Length = 213 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 123/205 (60%), Positives = 155/205 (75%), Gaps = 4/205 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 A +K++ IYRW+PD P M TY +DL+ CGPMVLD L+ IKN+ID TLT R Sbjct: 9 TAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFR 68 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q+ Sbjct: 69 RSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQY 128 Query: 137 RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +SIEP+LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA Sbjct: 129 KSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 188 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLE 219 +L+QAYRW+IDSRD+F ERL L+ Sbjct: 189 VLMQAYRWMIDSRDDFTEERLAKLQ 213 >gi|110668883|ref|YP_658694.1| succinate dehydrogenase, subunit B (iron-sulfur protein) [Haloquadratum walsbyi DSM 16790] gi|109626630|emb|CAJ53097.1| succinate dehydrogenase, subunit B (iron-sulfur protein) [Haloquadratum walsbyi DSM 16790] Length = 290 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIK 67 S ++ + +++ +++R++P+ P D ++V + G VLD L+Y + Sbjct: 34 SEIETDTEHDDSHEDEDTYVLKVFRYDPEIAAKQEPRFDDFHVPY-HKGMTVLDALMYAR 92 Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + D +LT R SCR+ ICGS M ++G L C + D++ + V PLPH V+KDLVV Sbjct: 93 DNYDSSLTFRHSCRQAICGSDAMFVNGKQRLCCKTQLSDLEEPVRVEPLPHQDVVKDLVV 152 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 DM HFY Q S+EP+ +T +E QS ++R+K+ C+ C C +SC Sbjct: 153 DMEHFYDQMESVEPYFQTDDLPEGELEEQRQSRQNREKVKMSTRCIWCGACMSSCNVAAG 212 Query: 186 NSDRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 N+D YLGPA + +AYR+ +D R DE + ERL+ +E ++RC T +CT CPK + Sbjct: 213 NND-YLGPAAINKAYRFTMDEREGDEMKQERLEIIERENGVWRCQTQFSCTDVCPKDIPL 271 Query: 244 AKAIAKIKMMLLDRKI 259 + I ++K + + Sbjct: 272 TEHIQELKREAVKNNL 287 >gi|194333596|ref|YP_002015456.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Prosthecochloris aestuarii DSM 271] gi|194311414|gb|ACF45809.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Prosthecochloris aestuarii DSM 271] Length = 241 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 139/229 (60%), Gaps = 3/229 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 RI R+NP + P Y V+ + LD L+ I++ D TL LR+SC G+CGS Sbjct: 14 TIRILRYNPQSDTEPYYREYQVEAAPHERI-LDVLVRIQSDHDSTLALRKSCGHGVCGSD 72 Query: 89 GMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC ++DIKG I V PLP V +DLV+D F+ +++++ P+L Sbjct: 73 AMLINGENRLACSTLVRDIKGTLIRVEPLPGAPVKRDLVLDTDRFWDKYQAVMPYLIPSE 132 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P KE LQS + +KI+ +C++C C+ +CP+ W N+ YLGPA LL+AYR++ DSR Sbjct: 133 PAPDKERLQSPAEHKKIEESTKCILCGACTHACPTTWANA-TYLGPAALLKAYRFIFDSR 191 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D+ G+R++ + ++RC+T NC ++CPK ++ I+++K + Sbjct: 192 DQATGQRIERIASDDGIWRCYTAYNCVEACPKDIDITWHISQLKKAAIR 240 >gi|289582775|ref|YP_003481241.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Natrialba magadii ATCC 43099] gi|289532328|gb|ADD06679.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Natrialba magadii ATCC 43099] Length = 292 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 135/240 (56%), Gaps = 9/240 (3%) Query: 27 LKEYRIYRWNPD--NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +++R++P+ +K P D ++V + G VLD ++Y +++ D +LT R SCR+ + Sbjct: 52 TVHIKVFRYDPEVADKQEPRFDDFHVPFEK-GMTVLDAVMYARDEFDSSLTFRHSCRQAV 110 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGS ++G+ L C + +++ + + PLPH V+KDLVVDM HFY Q ++EP+ + Sbjct: 111 CGSDAFFVNGSQMLGCKTQLSELEQPVRIEPLPHQEVVKDLVVDMDHFYDQMHAVEPYFQ 170 Query: 145 TVSPK---PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +E QS E+R+KI C+ C C +SC + + YLGPA + +AY+ Sbjct: 171 DEDTPAASDLEEQRQSPENREKIKMSSRCIWCGACMSSC-NIAAGDNEYLGPAAINKAYK 229 Query: 202 WLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +D R +E + RL LE ++RC T +CT+ CPK + + I ++K + + + Sbjct: 230 FAMDDRESEEIKEHRLRILEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAVKKNL 289 >gi|240948012|ref|ZP_04752430.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor NM305] gi|240297682|gb|EER48156.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor NM305] Length = 241 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P ++ + V D +LD L YIK+++ P L+ R SCR ICGSC Sbjct: 5 TIEVLRYNPEQDNEPHLEKFEVPFD-GQTSLLDALNYIKDELQPELSYRWSCRMAICGSC 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 64 GMMVNGKPKLACKTFLRDYSGHMRIEPLSNFPIERDLVVDLSHFIDSLEAIQPYIIDNKA 123 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA L A+R+ +D+RD Sbjct: 124 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAALTLAHRYNLDNRD 182 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 183 NGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGK 225 >gi|209696195|ref|YP_002264125.1| fumarate reductase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] gi|208010148|emb|CAQ80473.1| fumarate reductase complex, iron-sulfur protein [Aliivibrio salmonicida LFI1238] Length = 247 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 3/231 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 T K +++ I R+NP P + T+ V D+ VLD L YIK+ +D L+ R SCR Sbjct: 2 TAGKRVQKVHILRYNPMTDSEPHLQTFDVPCDDT-TSVLDALGYIKDNLDKDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC ++D + + PL + ++ KDL+VDM+ F + +I+P Sbjct: 61 MAICGSCGMMVNNVPKLACKAFLRDYPDGLTIEPLANFAIEKDLIVDMTPFIERLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ E K C+ C C +CP + N ++GPA L A+ Sbjct: 121 YIIGNDLTPEQGPNNQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTMAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +DSRD ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 RYNLDSRDHGSAERMKLINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 230 >gi|156972500|ref|YP_001443407.1| fumarate reductase iron-sulfur subunit [Vibrio harveyi ATCC BAA-1116] gi|156524094|gb|ABU69180.1| hypothetical protein VIBHAR_00132 [Vibrio harveyi ATCC BAA-1116] Length = 252 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +++ I R+ P+ P T+ V D VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQKVDILRYAPEKDAEPYTQTFEVPFDET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGIMVNNVPKLACKSFLRDYPNGVTIEPLANFPIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRKPEDGTNLQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMKLINGENGAWGCTFVGYCSEVCPKSVDPAAAVNQGK 229 >gi|146182596|ref|XP_001024894.2| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Tetrahymena thermophila] gi|146143783|gb|EAS04649.2| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Tetrahymena thermophila SB210] Length = 312 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 124/249 (49%), Positives = 172/249 (69%), Gaps = 11/249 (4%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 +K+LK++ +YR+NP D P +Y+ D+ PM LD +LYIKN++DPTL++RRSC Sbjct: 63 EEKKHLKQFLVYRYNPADPHDQPKYVSYWCDIKKFPPMFLDAILYIKNELDPTLSIRRSC 122 Query: 81 REGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC +N DG +TLAC+ +D+ + PL HM ++KDLVVDM++FY+Q++ I Sbjct: 123 REGICGSCAVNCDGLHTLACISGFNRDLSKPTIITPLGHMFILKDLVVDMTNFYAQYKMI 182 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EP+LK +PKP KE QS E R +DGLYECV+CA CSTSCPSYWW+ DRYLGPAIL Sbjct: 183 EPYLKRKTPKPDANKEYPQSPEQRALLDGLYECVLCAACSTSCPSYWWHPDRYLGPAILQ 242 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-------AKAIAKI 250 QAYRW++DSRDE+ ER++ + + RL C I C+ +CPKGLNP + Sbjct: 243 QAYRWIVDSRDEYTQERIERIAEDVRLDDCQQIGMCSFTCPKGLNPQLSLKNLMDMVKDF 302 Query: 251 KMMLLDRKI 259 + +++++ Sbjct: 303 RQKRIEQEV 311 >gi|240169113|ref|ZP_04747772.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium kansasii ATCC 12478] Length = 275 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 93/240 (38%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD+ ++ V +++ L+YIK +D TLT RRSC Sbjct: 35 MVTVKIARFNPDDPERYTETGGWQSFRVPCLPSD-RLINLLIYIKGYLDGTLTFRRSCGH 93 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M I+G N LAC M+D + I V P+ + V KDLVVDM F+ Sbjct: 94 GVCGSDAMRINGVNRLACKVLMRDLLPKKPGKQLTITVEPIRGLPVEKDLVVDMEPFFEA 153 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+++P+L T P +E +QS DR + D +C++CA C+TSCP +W Y GPA Sbjct: 154 YRAVKPYLITSGNPPTRERIQSQTDRARYDDTTKCILCAACTTSCPVFWNEGS-YFGPAA 212 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE ERLD L + ++RC T NCT +CP+G+ KAI ++K L+ Sbjct: 213 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTDACPRGIAVTKAIQEVKRALM 272 >gi|41409542|ref|NP_962378.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398373|gb|AAS05994.1| SdhB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 267 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 17/244 (6%) Query: 27 LKEYRIYRWNPDNK----GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD ++ V M L+ L+YIK+ +D TLT RRSC Sbjct: 23 MVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRM-LNLLIYIKSYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-----------IKGAIAVYPLPHMSVIKDLVVDMSH 131 G+CGS M I+G N LAC M+D I V P+ + V KDLVVDM Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPEPKKGKPGKPLTITVEPIRGLPVEKDLVVDMEP 141 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F+ +R+++P+L T P +E +QS DR + D +C++CA C+TSCP +W Y Sbjct: 142 FFDAYRAVKPYLITTGNPPTRERIQSPADRARYDDTTKCILCAACTTSCPVFWHEGS-YY 200 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPA ++ A+R++ DSRDE ERLD L + ++RC T NCT +CP+G+ KAI ++K Sbjct: 201 GPAAIVNAHRFIFDSRDEGAAERLDILNEVDGVWRCRTTFNCTDACPRGIEVTKAIQEVK 260 Query: 252 MMLL 255 ++ Sbjct: 261 RAIM 264 >gi|330444989|ref|ZP_08308643.1| fumarate reductase iron-sulfur protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493107|dbj|GAA03140.1| fumarate reductase iron-sulfur protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 246 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++ I R++P P ++ + V + VLD L YIK+ +D L+ R SCR Sbjct: 2 SANRIQLVEILRYDPAKDAEPYLEKFEVPFNET-MSVLDALGYIKDHLDKDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++G LAC ++D + + PL + ++ KDL+VDM+ F + +I+P+ Sbjct: 61 AICGSCGMMVNGVPKLACKSFLRDYPNGVKIEPLANFAIEKDLIVDMTPFIERLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ E K C+ C C +CP + N ++GPA L A+R Sbjct: 121 IIGNDRTPEDGTNLQTPEQLAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD + ER++ + + C + C++ CPK ++PA A+ + K Sbjct: 180 YNLDSRDNGKDERMELINGENGAWGCTFVGYCSEVCPKSVDPAAAVNQGK 229 >gi|148272149|ref|YP_001221710.1| succinate dehydrogenase iron-sulfur subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830079|emb|CAN01008.1| succinate dehydrogenase, iron-sulfur protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 253 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 135/235 (57%), Gaps = 6/235 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 I R+ P P + + V++ + LD L IK + D +LT RRSC G+CG Sbjct: 21 TVTLIIRRYLPGQDAEPRWEDFDVEVYPTDRI-LDALHKIKWEQDGSLTFRRSCAHGVCG 79 Query: 87 SCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-L 143 S M I+G N LAC +KD I I V + + + KDLVVDM F+ R ++P+ + Sbjct: 80 SDAMRINGRNRLACKTLIKDLDISQPIYVEAIKGLPLEKDLVVDMEPFFESFRDVQPFLI 139 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P+ KE +QS +R + D +C++CA C++SCP +W + +Y GPA ++ A+R++ Sbjct: 140 SNTKPEKGKERIQSAAERARFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFI 198 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRDE RLD L D ++RC T NC+++CP+G+ +AIA++K ++ K Sbjct: 199 FDSRDESNV-RLDILNDKEGVWRCRTTFNCSEACPRGIQVTQAIAEVKQAIMRGK 252 >gi|59712942|ref|YP_205718.1| fumarate reductase iron-sulfur subunit [Vibrio fischeri ES114] gi|197334442|ref|YP_002157131.1| fumarate reductase iron-sulfur subunit [Vibrio fischeri MJ11] gi|59481043|gb|AAW86830.1| fumarate reductase (anaerobic), Fe-S subunit [Vibrio fischeri ES114] gi|197315932|gb|ACH65379.1| fumarate reductase iron-sulfur subunit [Vibrio fischeri MJ11] Length = 247 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 TG +++ I R++P P + T+ V D VLD + YIK+ +D L+ R SCR Sbjct: 2 TGGNRIQKVSILRYDPMKDEKPYLQTFDVPCDET-TSVLDAIGYIKDNLDKDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC ++D + + PL + + KDL+VDM+ F + +I+P Sbjct: 61 MAICGSCGMMVNNVPKLACKAFLRDYPDGLTLEPLANFPIEKDLIVDMTPFIERLEAIKP 120 Query: 142 WL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ E K C+ C C +CP + N ++GPA L A+ Sbjct: 121 YILGNDRTPEQGPNTQTPEQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAALTLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +DSRD ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 180 RYNLDSRDNGSAERMKLINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGK 230 >gi|118464778|ref|YP_883438.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium 104] gi|254776733|ref|ZP_05218249.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium subsp. avium ATCC 25291] gi|118166065|gb|ABK66962.1| succinate dehydrogenase [Mycobacterium avium 104] Length = 267 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 17/244 (6%) Query: 27 LKEYRIYRWNPDNK----GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPD ++ V M L+ L+YIK+ +D TLT RRSC Sbjct: 23 MVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRM-LNLLIYIKSYLDGTLTFRRSCAH 81 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-----------IKGAIAVYPLPHMSVIKDLVVDMSH 131 G+CGS M I+G N LAC M+D I V P+ + V KDLVVDM Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPEPKKGKPGKPLTITVEPIRGLPVEKDLVVDMEP 141 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F+ +R+++P+L T P +E +QS DR + D +C++CA C+TSCP +W Y Sbjct: 142 FFDAYRAVKPYLITTGNPPTRERIQSPADRARYDDTTKCILCAACTTSCPIFWHEGS-YY 200 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPA ++ A+R++ DSRDE ERLD L + ++RC T NCT +CP+G+ KAI ++K Sbjct: 201 GPAAIVNAHRFIFDSRDEGAAERLDILNEVDGVWRCRTTFNCTDACPRGIEVTKAIQEVK 260 Query: 252 MMLL 255 ++ Sbjct: 261 RAIM 264 >gi|313126047|ref|YP_004036317.1| succinate dehydrogenase subunit b [Halogeometricum borinquense DSM 11551] gi|312292412|gb|ADQ66872.1| succinate dehydrogenase subunit B [Halogeometricum borinquense DSM 11551] Length = 292 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 136/236 (57%), Gaps = 8/236 (3%) Query: 30 YRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++R++P+ G P D ++V + G VLD L+Y ++ D +LT R SCR+ ICGS Sbjct: 56 LKVFRYDPEVAGKQEPRFDDFHVPY-HKGMTVLDALMYARDHYDSSLTFRHSCRQAICGS 114 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 + ++G+ L C + D++ + + PLPH V+KDLVVDM HFY Q S+EP+ +T Sbjct: 115 DALFVNGSQRLGCKTQLSDLEEPVRIEPLPHQEVVKDLVVDMEHFYDQMESVEPYFQTND 174 Query: 148 PKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +E Q+ E+R+KI C+ C C +SC + ++YLGPA + +AYR+ +D Sbjct: 175 LPDGELEEQRQTRENREKIKMSTRCIWCGACMSSC-NIAAGDNKYLGPAAINKAYRFTMD 233 Query: 206 SR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R ++ + R++ LE ++RC T +CT+ CPK + + I ++K + + Sbjct: 234 EREGEDMKQHRMEILEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAVKNNL 289 >gi|189500628|ref|YP_001960098.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium phaeobacteroides BS1] gi|189496069|gb|ACE04617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium phaeobacteroides BS1] Length = 231 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 3/223 (1%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I R++P+ +P + VD VLD LL IK++ D TL LR+SC G+CGS M Sbjct: 7 ILRFDPEKDAHPHYQEFIVDTAPHE-RVLDVLLKIKSEQDSTLGLRKSCGHGVCGSDAML 65 Query: 92 IDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 I+G N LAC ++D I V PLP S++KDL++D F+++++ + P+L P Sbjct: 66 INGENRLACSTLVRDLKSNRIKVEPLPGASIVKDLIIDTDAFWTKYQEVMPYLVNDEAPP 125 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 +E LQ E+ + I+ C++C CS +CP+ W N D YLGPA LL+AYR++ DSRD Sbjct: 126 DRERLQRPEEHEMIEESTRCILCGACSHACPTSWAN-DSYLGPAALLKAYRFIFDSRDHA 184 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ERL + +++C+T NC ++CPK ++ I ++K Sbjct: 185 DQERLRKVTSDHGIWKCYTAYNCVEACPKDIDITWHITRLKKA 227 >gi|307250804|ref|ZP_07532733.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857163|gb|EFM89290.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 244 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P +D Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPETDSEPHLDKYEVPFD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVIDNKA 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 186 NGREQRMKLLSSKNGVWSCTFVGYCSEMCPKHVGPASAINQGK 228 >gi|224080253|ref|XP_002189250.1| PREDICTED: putative succinate dehydrogenase Ip subunit, partial [Taeniopygia guttata] Length = 247 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 123/198 (62%), Positives = 152/198 (76%), Gaps = 4/198 (2%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 LK++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSC Sbjct: 50 AAAPRLKKFAIYRWDPDKAGDKPRMQTYEVDLNKCGPMVLDALIKIKNEMDFTLTFRRSC 109 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REGICGSC MNI G NTLAC+K + + +YPLPHM V+KDLV D+S+FY+Q++SI Sbjct: 110 REGICGSCAMNIAGGNTLACIKKIDSDLSKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSI 169 Query: 140 EPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +P+LK + ++ LQS EDRQK+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+ Sbjct: 170 QPYLKKKDESQEGKQQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLM 229 Query: 198 QAYRWLIDSRDEFQGERL 215 QAYRW+IDSRDEF ERL Sbjct: 230 QAYRWMIDSRDEFTEERL 247 >gi|292656924|ref|YP_003536821.1| succinate dehydrogenase subunit B [Haloferax volcanii DS2] gi|291372276|gb|ADE04503.1| succinate dehydrogenase subunit B (iron-sulfur protein) [Haloferax volcanii DS2] Length = 293 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 8/236 (3%) Query: 30 YRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++R++P+ P D ++V G +LD L++ ++ D +LT R SCR+ ICGS Sbjct: 57 LKVFRYDPEVPEKQEPRFDDFHVPYKQ-GMTILDALMWARDHYDSSLTFRHSCRQAICGS 115 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 + ++G+ L C + D+ I V PLPH V+KDLVVDM HFY Q S+EP+ +T S Sbjct: 116 DALFVNGSQRLGCKTQLSDLSEPIRVEPLPHSDVVKDLVVDMEHFYDQMESVEPYFQTNS 175 Query: 148 PKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 E Q+ E+R+K+ C+ C+ C +SC + + YLGPA + +AYR+ +D Sbjct: 176 LPDGELDEQRQTRENREKVKMSTRCIWCSACMSSC-NIAAGDNEYLGPAAINKAYRFAMD 234 Query: 206 SR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R ++ + RL+ LE ++RC T +CT+ CPK + + I ++K + + Sbjct: 235 EREGEDMKQRRLEILEQEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAIKNNL 290 >gi|33151305|ref|NP_872658.1| fumarate reductase iron-sulfur subunit [Haemophilus ducreyi 35000HP] gi|33147525|gb|AAP95047.1| fumarate reductase iron-sulfur protein [Haemophilus ducreyi 35000HP] Length = 244 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P +D Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPEIDCEPHLDKYEVPFD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVIDNKT 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 PEGQRAKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 186 NGVEQRMKLLNSKNGVWSCTFVGYCSEVCPKHVGPASAINQGK 228 >gi|301631976|ref|XP_002945067.1| PREDICTED: succinate dehydrogenase iron-sulfur subunit-like, partial [Xenopus (Silurana) tropicalis] Length = 196 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 104/187 (55%), Positives = 145/187 (77%), Gaps = 1/187 (0%) Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 ++ RRSCREG+CGS MNI+G N LAC+ +M + G I + PLP + VI+DL+VDM+ F+ Sbjct: 10 ISFRRSCREGVCGSDAMNINGKNGLACLTNMNTLPGTITLKPLPGLPVIRDLIVDMTQFF 69 Query: 134 SQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q+ SI+P+L+ +P + QS E+R++++GLYEC++CA CSTSCPS+WWN D+++G Sbjct: 70 KQYHSIKPYLQNETPVSPFKERLQSPEEREELNGLYECILCASCSTSCPSFWWNPDKFVG 129 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA LLQAYR++ DSRDE G+RLDNL+DP+RL+RCH+IMNC CPKGLNP +AI KIK Sbjct: 130 PAGLLQAYRFIADSRDEATGDRLDNLQDPYRLFRCHSIMNCVDVCPKGLNPTRAIGKIKE 189 Query: 253 MLLDRKI 259 ++ R + Sbjct: 190 LMTRRAL 196 >gi|117620626|ref|YP_857700.1| fumarate reductase iron-sulfur subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562033|gb|ABK38981.1| fumarate reductase iron-sulfur protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 244 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 5/226 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + E I R+ P+ P M T+ V +LD L YIK+ +D TL+ R SCR IC Sbjct: 3 EMIEIEILRYRPEQDNEPWMQTFQVPY-LKEMSLLDALQYIKDHLDSTLSFRWSCRMAIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM ++G L C ++D + + PL + + +DLVVDMS F + SI+P++ Sbjct: 62 GSCGMMVNGIPKLGCKTFLRDYLPGKMTIEPLNNFPIERDLVVDMSDFIEKLESIKPYII 121 Query: 145 TVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P+ + Q+ D K C+ C C +CP Y N ++ GPA L AYR+ Sbjct: 122 PAEPRSLCDGEYTQTPADMAKYHQFSMCINCGLCYAACPQYGINK-KFTGPAALALAYRY 180 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 D+RD ER+ + ++ C + C++ CPKG++PA AI Sbjct: 181 NADNRDSASRERMKIISQDEGVWGCTFVGYCSEVCPKGVDPAAAIQ 226 >gi|257053894|ref|YP_003131727.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halorhabdus utahensis DSM 12940] gi|256692657|gb|ACV12994.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halorhabdus utahensis DSM 12940] Length = 309 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 136/244 (55%), Gaps = 8/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + RI+R++P+ +G P D + V + G VLD L+Y ++ D TLT R S Sbjct: 65 ETDGETTHLRIFRYDPEVEGKSEPRFDDFQVPYEQ-GMTVLDALIYARDHFDSTLTFRHS 123 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 C++G+CGS + ++G+ L C + + + + PLPH V+KDLVVDM HFY Q ++ Sbjct: 124 CQQGVCGSDALFVNGSQYLGCKTQLNEFDEPVRIEPLPHQDVVKDLVVDMQHFYEQMDAV 183 Query: 140 EPWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EP+ + +E Q+ E+R+KI C+ C C++SC ++YLGPA L Sbjct: 184 EPYFEPDELPEDELEEQRQTRENREKIKLSTRCIQCGACASSCNV-AAGDNKYLGPAALN 242 Query: 198 QAYRWLID--SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +AYR+++D E + ERL+ +ED ++RC T +CT+ CPK + + I ++K + Sbjct: 243 KAYRFIMDEREGGERREERLEIVEDEHGVWRCQTQFSCTEVCPKDIPLTEHIQELKREAI 302 Query: 256 DRKI 259 I Sbjct: 303 KEDI 306 >gi|261493894|ref|ZP_05990406.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495160|ref|ZP_05991624.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|110735301|gb|ABG89221.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica] gi|261309230|gb|EEY10469.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310496|gb|EEY11687.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 243 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 72/223 (32%), Positives = 121/223 (54%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP++ P +D Y V D +LD L +IK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPESDSEPHLDRYEVPYD-SQTSLLDALGFIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYIIDNKA 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L ++ C + C++ CPK + PA A+ + K Sbjct: 186 NGREERMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAVNQGK 228 >gi|145298133|ref|YP_001140974.1| fumarate reductase iron-sulfur subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142850905|gb|ABO89226.1| fumarate reductase, iron-sulfur protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 244 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 5/226 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + E I R+ P+ P M T+ V +LD L YIK+++D TL+ R SCR IC Sbjct: 3 EMIEIEILRYRPEQDNEPWMQTFQVPY-LKEMSLLDALQYIKDQLDSTLSFRWSCRMAIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM ++G L C ++D + + PL + + +DLVVDMS F + SI+P++ Sbjct: 62 GSCGMMVNGIPKLGCKTFLRDYLPGKMKIEPLNNFPIERDLVVDMSDFIEKLESIKPYII 121 Query: 145 TVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P+ + Q+ D K C+ C C +CP Y N ++ GPA L AYR+ Sbjct: 122 PSEPRSLCDGEYTQTPADMAKYHQFSMCINCGLCYAACPQYGINK-KFTGPAALALAYRY 180 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 D+RD ER+ + ++ C + C+ CPKG++PA AI Sbjct: 181 NADNRDSASKERMKIISQDEGVWGCTFVGYCSDVCPKGVDPAAAIQ 226 >gi|124027054|ref|YP_001012374.1| succinate dehydrogenase iron-sulfur subunit [Hyperthermus butylicus DSM 5456] gi|123977748|gb|ABM80029.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Hyperthermus butylicus DSM 5456] Length = 307 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 87/244 (35%), Positives = 138/244 (56%), Gaps = 11/244 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +RI R++P+ + Y V G VLD L++IK ++DPTL++R SCR+G Sbjct: 11 PPKEVIFRIKRYDPETGRS-WWQEYRVQ-TYRGMTVLDALIWIKERLDPTLSMRYSCRQG 68 Query: 84 ICGSCGMNIDGTNTLACVKDM----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 +CGSCGM I+GT LAC + + K + V PLP+ V++DLV D + F+ +HR+I Sbjct: 69 VCGSCGMLINGTPRLACQTQVGAIATNEKPVVTVEPLPNFPVVRDLVTDFTRFFEKHRAI 128 Query: 140 EPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 P++ +P + E L S E+ +I C+MC C +CP + YLGP Sbjct: 129 MPYIIRRNPREVDEAKYEFLMSPEEHMEIYQYSLCIMCGLCYAACPV-AASDPEYLGPQA 187 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L QAYR+++D RDE +R+ ++ +RCH +C+ CPK ++PA AI +++ ++ Sbjct: 188 LTQAYRFIVDVRDEGAEKRIAVVDTEHGCHRCHFAASCSAVCPKDVDPAAAIQRLRRIVF 247 Query: 256 DRKI 259 K+ Sbjct: 248 LDKL 251 >gi|15827292|ref|NP_301555.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium leprae TN] gi|221229770|ref|YP_002503186.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium leprae Br4923] gi|467181|gb|AAA17339.1| L308_F1_28 [Mycobacterium leprae] gi|13092841|emb|CAC30205.1| succinate dehydrogenase iron-sulfur protein [Mycobacterium leprae] gi|219932877|emb|CAR70790.1| succinate dehydrogenase iron-sulfur protein [Mycobacterium leprae Br4923] Length = 264 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 27 LKEYRIYRWNPDNK----GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + +I R+NPDN ++ V +L+ L+YIK +D TLT RRSC Sbjct: 24 MVTVKIARFNPDNPDAFAETGGWQSFRVPCLPTD-RLLNLLIYIKGYLDGTLTFRRSCAH 82 Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+CGS M ++G N LAC M+D I V P+ + V KDLVVDM F+ Sbjct: 83 GVCGSDAMRVNGVNRLACKVLMRDLLPKKAGKNLTITVEPIRGLPVEKDLVVDMEPFFDA 142 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R+++P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA Sbjct: 143 YRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWSEG-TYYGPAA 201 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ A+R++ DSRDE GERL L + ++RC T NCT+SCP+ + KAI ++K L+ Sbjct: 202 IVNAHRFIFDSRDEGAGERLTLLNEVDGVWRCRTTFNCTESCPRNIEVTKAIQEVKRALM 261 >gi|242237922|ref|YP_002986103.1| fumarate reductase iron-sulfur subunit [Dickeya dadantii Ech703] gi|242129979|gb|ACS84281.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech703] Length = 244 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+NP+ P +TY V +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EVMRYNPEQDNAPHFETYSVPYSR-ETSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PK 149 ++ LAC ++D + + L + + +DLVVDM+HF +I+P++ Sbjct: 69 MVNNVPKLACKTFLRDYADGMKIEALGNFPIERDLVVDMTHFIESLEAIKPYVIGNDRKP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A+R+ +DSRD Sbjct: 129 EQGTNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDSRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GKKERMPMLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|322368769|ref|ZP_08043336.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haladaptatus paucihalophilus DX253] gi|320551500|gb|EFW93147.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haladaptatus paucihalophilus DX253] Length = 288 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 87/244 (35%), Positives = 138/244 (56%), Gaps = 8/244 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 ++ +++R++P+ +G P D +YV + G VLD L+Y +++ D TLT R S Sbjct: 44 EADEETVHLKVFRYDPEVEGKMDPRFDDFYVPFEK-GMTVLDALMYARDRFDTTLTFRHS 102 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR+ ICGS + I+GT L C + D+ G I V PLPH V+KDLVVDM HFY Q S+ Sbjct: 103 CRQAICGSDALFINGTQRLGCKTQISDLDGPIRVEPLPHAEVVKDLVVDMEHFYDQMHSV 162 Query: 140 EPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 EP+ +T +E Q+ E+R+KI C+ C C +SC + ++YLGPA L Sbjct: 163 EPYFQTNDEPSDELEEQRQTRENREKIKMSTRCIWCGACMSSC-NIAAGDNQYLGPAALN 221 Query: 198 QAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A+R+ +D R ++ + R + L+ ++RC T +CT CPK + + I ++K + Sbjct: 222 KAFRFAMDKREGEDMKEHRFEILDQEHGVWRCQTQFSCTNVCPKDIPLTEHIQELKREAV 281 Query: 256 DRKI 259 + Sbjct: 282 KNNL 285 >gi|293393229|ref|ZP_06637544.1| fumarate reductase subunit B [Serratia odorifera DSM 4582] gi|291424375|gb|EFE97589.1| fumarate reductase subunit B [Serratia odorifera DSM 4582] Length = 244 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP++ P +TY V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKTLKIEVMRYNPESDAQPHFETYNVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNRVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + LQ+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNDRKPEDGPNLQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKKQRMPQLNGQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|90413349|ref|ZP_01221342.1| succinate dehydrogenase [Photobacterium profundum 3TCK] gi|90325591|gb|EAS42060.1| succinate dehydrogenase [Photobacterium profundum 3TCK] Length = 246 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++ I R++P+ P + + V + VLD L YIK+ +D L R SCR IC Sbjct: 5 RIQKVEILRYDPEKDAEPYFELFEVPFNET-MSVLDALGYIKDNLDKDLAYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC ++D + + L + ++ KDL+VDM+ F + +I+P++ Sbjct: 64 GSCGMMVNKVPKLACKTFLRDYPNGLKIEALANFAIEKDLIVDMTPFIERLEAIKPYIIG 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + Q+ E K C+ C C ++CP + N ++GPA L A+R+ + Sbjct: 124 NNRTPEDGPNNQTPEQMAKYKQFAGCINCGLCYSACPQFGLNP-EFIGPAALTLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 DSRD ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 183 DSRDNGAQERMKLINGENGAWGCTFVGYCSEVCPKSVDPAAAVNQGK 229 >gi|149481158|ref|XP_001506093.1| PREDICTED: similar to succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Ornithorhynchus anatinus] Length = 313 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 144/179 (80%), Gaps = 3/179 (1%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSC MNI+G NTLAC + + + +YPLPHM V+KDLV D+S+FY+Q++SIEP Sbjct: 130 GICGSCAMNINGGNTLACTRRIDPDINKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEP 189 Query: 142 WLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QA Sbjct: 190 YLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 249 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YRW+IDSRDEF ERL L+DPF LYRCHTIMNCT++CPKGLNP KAIA+IK M+ K Sbjct: 250 YRWMIDSRDEFTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 308 >gi|302037830|ref|YP_003798152.1| succinate dehydrogenase/fumarate reductase Fe-s protein subunit [Candidatus Nitrospira defluvii] gi|300605894|emb|CBK42227.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Candidatus Nitrospira defluvii] Length = 324 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 11/240 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R+NP+ P + Y +D+ G VL+ L+ IKN++D L LR SCR ICGSC Sbjct: 4 TFTIQRFNPETDQQPHREDYRLDI-GRGMTVLEALIRIKNELDGRLALRYSCRSAICGSC 62 Query: 89 GMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M+I+GT LAC ++ G I++ PLP++ VIKDLVVDMS F+ + R++ PWL Sbjct: 63 AMHINGTEKLACRTSIRKELERHGRISIEPLPNLPVIKDLVVDMSPFWEKIRAVTPWLTP 122 Query: 146 VSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + L+ + + + C+MC C +C S+ S +LGPA L ++ R Sbjct: 123 ETHPTKRYGSSGQLRLLPESYQFHNVDACIMCGACVAACTSHEV-SRGFLGPAALAKSAR 181 Query: 202 WLIDSRD--EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ D R+ + RL L++ ++ C C Q CPK + P +AI +++ L + Sbjct: 182 FVADPREPAGAKQARLTALQEADGIWDCTRCNMCVQVCPKDVQPMEAIIRLRRSSLRHGL 241 >gi|116749534|ref|YP_846221.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Syntrophobacter fumaroxidans MPOB] gi|116698598|gb|ABK17786.1| succinate dehydrogenase subunit B [Syntrophobacter fumaroxidans MPOB] Length = 237 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 132/229 (57%), Gaps = 3/229 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I+R++P+ P Y V + +LD L IK + D TL R SC G+CGS G Sbjct: 5 FKIFRFDPETDEEPYYRNYTV-VAEPQERILDCLNRIKWEQDGTLAYRMSCGHGVCGSDG 63 Query: 90 MNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M I+G LAC K +++ +G + + PLP V+KDLVVDM HF R I P+L + S Sbjct: 64 MRINGVCGLACQKLVREYEGLEVVLEPLPFFKVLKDLVVDMEHFLDGIRLIRPYLVSDSA 123 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P E QS EDR+K+D + C++CACC+ SCP +++Y+GPA L+ AYR++ D+RD Sbjct: 124 PPEAERQQSPEDRKKVDDVIRCILCACCTGSCPVM-IQNEKYVGPAALVWAYRFIFDTRD 182 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ERL ++ + C CT+ CPKG+ K+I +K + Sbjct: 183 DRYAERLKQIDFHDGAWSCVNFFECTRVCPKGIPVTKSINFLKREIQKA 231 >gi|197287390|ref|YP_002153262.1| fumarate reductase iron-sulfur subunit [Proteus mirabilis HI4320] gi|194684877|emb|CAR47021.1| fumarate reductase iron-sulfur protein [Proteus mirabilis HI4320] Length = 241 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 3/225 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR ICGS Sbjct: 4 VKMEVMRYNPETDDAPHFVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTV 146 CGM ++ LAC M+D + + L + V +DLVVDM+HF +I+P++ Sbjct: 63 CGMMVNRVPKLACKTFMRDYPNGVRIEALGNFPVERDLVVDMTHFIESLEAIKPYILGND 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 Q+ K C+ C C +CP + N ++GPA + A R+ DS Sbjct: 123 RKPSEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAQRYNTDS 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RD ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 182 RDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|330828650|ref|YP_004391602.1| fumarate reductase iron-sulfur protein [Aeromonas veronii B565] gi|328803786|gb|AEB48985.1| Fumarate reductase iron-sulfur protein [Aeromonas veronii B565] Length = 241 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 119/225 (52%), Gaps = 5/225 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + E I R+ P+ P M T+ V +LD L YIK+ +D TL+ R SCR ICG Sbjct: 1 MIEIEILRYRPEQDNEPWMQTFQVPYQR-EMSLLDALQYIKDHLDSTLSFRWSCRMAICG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SCGM ++G L C ++D + V PL + + +DLVVDMS F + SI+P++ Sbjct: 60 SCGMMVNGVPKLGCKAFLRDYLPGKMTVEPLNNFPIERDLVVDMSDFIEKLESIKPYIIP 119 Query: 146 VSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P+ + +Q+ + +C+ C C +CP Y N ++ GPA L AYR+ Sbjct: 120 SEPRSLCDGEYIQTPAQMAQYKQFSQCINCGLCYAACPQYGINK-KFTGPAALALAYRYN 178 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 +D+RD ER+ + ++ C + C++ CPKG++PA AI Sbjct: 179 VDNRDAGAKERMRIISQDEGVWGCTFVGYCSEVCPKGVDPAAAIQ 223 >gi|120493|sp|P20921|FRDB_PROVU RecName: Full=Fumarate reductase iron-sulfur subunit gi|45919|emb|CAA29502.1| unnamed protein product [Proteus vulgaris] Length = 245 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 3/231 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR Sbjct: 2 ADDMKHVKMEVMRYNPETDDAPHFVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC M+D + + L + V +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNRVPKLACKTFMRDYPNGVRIEALGNFPVERDLVVDMTHFIESLEAIKP 120 Query: 142 WL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A Sbjct: 121 YILGNDRKPSEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAQ 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ DSRD ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNTDSRDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|302792451|ref|XP_002977991.1| hypothetical protein SELMODRAFT_108358 [Selaginella moellendorffii] gi|300154012|gb|EFJ20648.1| hypothetical protein SELMODRAFT_108358 [Selaginella moellendorffii] Length = 217 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 125/217 (57%), Positives = 159/217 (73%), Gaps = 6/217 (2%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVK 102 PC+ Y VD NC M+LD L IKNK D ++T RRSCR+G+CGSC MNI+G N LAC+ Sbjct: 1 PCLQEYKVDTSNC-VMMLDVLFEIKNKHDSSITFRRSCRKGVCGSCAMNINGKNCLACLT 59 Query: 103 DMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQS 157 + + I V PLPHM VIKDLVVDMS+FY Q++SIEPWLKT K KE LQ+ Sbjct: 60 KVDRDEDGIASTVVLPLPHMFVIKDLVVDMSYFYQQYKSIEPWLKTKKQKEDGQKEFLQT 119 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E+R K+DG++EC++CACC+TSCPSYWWN+ + GPAILLQAY+ + DSRD+F ER++ Sbjct: 120 KEERAKLDGMWECILCACCNTSCPSYWWNTPTFPGPAILLQAYKMIADSRDDFTKERVEA 179 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L ++ RCHTI NC+ +CPKGLNPA+ I +IK ML Sbjct: 180 LRGEMKIGRCHTIRNCSNACPKGLNPAEKILQIKGML 216 >gi|307132777|ref|YP_003884793.1| fumarate reductase (anaerobic), Fe-S subunit [Dickeya dadantii 3937] gi|306530306|gb|ADN00237.1| fumarate reductase (anaerobic), Fe-S subunit [Dickeya dadantii 3937] Length = 244 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+NP+ P +TY V +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EVMRYNPEQDNAPHFETYDVPYTR-ETSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PK 149 ++ LAC ++D + + L + + +DLVVDM+HF +I+P++ S Sbjct: 69 MVNNVPKLACKTFLRDYTAGMKIEALGNFPIERDLVVDMTHFIESLEAIKPYIIGNSRTP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 129 DQGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GKKERMAQLNSDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|212710998|ref|ZP_03319126.1| hypothetical protein PROVALCAL_02067 [Providencia alcalifaciens DSM 30120] gi|212686166|gb|EEB45694.1| hypothetical protein PROVALCAL_02067 [Providencia alcalifaciens DSM 30120] Length = 244 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 I R+NP+ P + TY V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EIMRFNPETDNEPHLVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PK 149 +D LAC ++D I + PL + + +DLVVDM+ F + +I+P++ Sbjct: 69 MVDNVPKLACKTFLRDYPQGIKIEPLGNFPIERDLVVDMTSFIERLEAIKPYIIGNDRKP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ +K C+ C C +CP + N +LGPA + A R+ +D+RD Sbjct: 129 SDGPNKQTPAQMEKYHQFSGCINCGLCYAACPQFGLNP-EFLGPAAITLAERYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GAKERMPLLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|322368621|ref|ZP_08043189.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haladaptatus paucihalophilus DX253] gi|320551905|gb|EFW93551.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haladaptatus paucihalophilus DX253] Length = 289 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 8/238 (3%) Query: 28 KEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++R++PD P D +YV D G VLD L+Y ++ D TLT+R SCR+ IC Sbjct: 51 VHLKVFRYDPDVPEKQKPRFDHFYVP-DKRGLTVLDALIYARDHFDSTLTVRHSCRQAIC 109 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GS + I+G+ LAC + D+ + V PLPH VIKDLVV+M HFY Q ++EP+ +T Sbjct: 110 GSDAVFINGSQRLACQTQVSDLDSPVQVEPLPHQEVIKDLVVEMEHFYDQMHAVEPYFQT 169 Query: 146 VSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E QS E+R++I C+ C C +SC + +RYLGPA + AYR+ Sbjct: 170 DEKPDDDLEEQRQSRENREEIKTATRCIWCGACMSSC-NIAAGDNRYLGPAAINAAYRFA 228 Query: 204 IDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D R+ RL+ ++ ++RC T +CT CPK + + I ++K + + + Sbjct: 229 MDEREGESVTEHRLNLMDQEHGVWRCQTQFSCTNVCPKDIPLTQHIQELKREAVKKNL 286 >gi|227358370|ref|ZP_03842710.1| succinate dehydrogenase [Proteus mirabilis ATCC 29906] gi|227161406|gb|EEI46450.1| succinate dehydrogenase [Proteus mirabilis ATCC 29906] Length = 245 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 3/231 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR Sbjct: 2 ADDMKHVKMEVMRYNPETDDAPHFVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC M+D + + L + V +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNRVPKLACKTFMRDYPNGVRIEALGNFPVERDLVVDMTHFIESLEAIKP 120 Query: 142 WL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A Sbjct: 121 YILGNDRKPSEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAQ 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ DSRD ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNTDSRDHGAKERMPQLNSENGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|332288837|ref|YP_004419689.1| fumarate reductase iron-sulfur subunit [Gallibacterium anatis UMN179] gi|330431733|gb|AEC16792.1| fumarate reductase iron-sulfur subunit [Gallibacterium anatis UMN179] Length = 257 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 14/242 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + I R+NP+ P + +Y V D +LD L YIK+K+DP L+ R SCR Sbjct: 2 ANALHTMTVEILRYNPEVDNEPHLKSYQVPYD-SQTSLLDALGYIKDKLDPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++G +LAC ++D G + + PL + + +DLVVD+SHF SI+P Sbjct: 61 MAICGSCGMMVNGRPSLACKTFLRDFSGHMRIEPLANFPIERDLVVDLSHFIESLESIKP 120 Query: 142 WLKTVSPKPAKELLQS------------HEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 ++ K + Q + +K C+ C C +CP + N Sbjct: 121 YIIGNKAPELKNVPQPSSELAKSRTKQTPAELEKYRTFSMCINCGLCYAACPQFGLNP-E 179 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ++GP + A+R+ +D+RD + ER+ L ++ C + C++ CPK + PA A+ + Sbjct: 180 FVGPGAITLAHRYNLDNRDHGKEERMKILNGKNGVWSCTFVGYCSEVCPKHVGPASAVNQ 239 Query: 250 IK 251 K Sbjct: 240 GK 241 >gi|159900303|ref|YP_001546550.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893342|gb|ABX06422.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Herpetosiphon aurantiacus ATCC 23779] Length = 250 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 128/235 (54%), Gaps = 6/235 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +R+ R++ Y+V+++ +LD L IK++ D +LT RR + GI GS Sbjct: 3 VTFRVPRFDAATDFTAKYQVYHVEVNQ-FTTILDALNIIKDEQDSSLTFRRGSQSGIDGS 61 Query: 88 CGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CGM I+G N LA + IAV PLP VI+DLVVD F+++ + P+L T Sbjct: 62 CGMMINGRNRLASTTRVLSLNSTEIAVGPLPGFPVIRDLVVDFDSFFAKDAVMLPYLVTD 121 Query: 147 --SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P KE LQS +D +I C C CC+++CP +W N Y GP+ L +AYR++ Sbjct: 122 IAKPADGKERLQSPKDANRIALAASCNQCGCCTSACPVHWSNG-EYYGPSALTRAYRFVE 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 DSRD RLD + ++RCHT+ NC++ CPK + + I +K ++ KI Sbjct: 181 DSRDTAIKARLDIVGSETGVWRCHTVFNCSE-CPKSIPNGENIQALKRKIMLNKI 234 >gi|251788029|ref|YP_003002750.1| fumarate reductase iron-sulfur subunit [Dickeya zeae Ech1591] gi|247536650|gb|ACT05271.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya zeae Ech1591] Length = 244 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 5/228 (2%) Query: 27 LKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + + R+NP+ P +TY V +LD L YIK+ + P L+ R SCR I Sbjct: 4 MKTLKMEVMRYNPEQDNAPHFETYDVPYTR-ETSLLDALGYIKDNLAPDLSYRWSCRMAI 62 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSCGM ++ LAC ++D G + + L + + +DLVVDM+HF +I+P++ Sbjct: 63 CGSCGMMVNNVPKLACKTFLRDYTGGMKIEALGNFPIERDLVVDMTHFIESLEAIKPYII 122 Query: 145 -TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 Q+ K C+ C C +CP + N ++GPA + A+R+ Sbjct: 123 GNKRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYN 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 182 LDNRDHGKKERMPQLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQSK 229 >gi|50122890|ref|YP_052057.1| fumarate reductase iron-sulfur subunit [Pectobacterium atrosepticum SCRI1043] gi|49613416|emb|CAG76867.1| fumarate reductase iron-sulfur protein [Pectobacterium atrosepticum SCRI1043] Length = 245 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 5/231 (2%) Query: 24 EKNLKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +K + + R+NP+ P +T+ V + +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMIKTLKMEVMRYNPEQDSEPYFETFDVPYN-TQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNKVPKLACKTFLREYTNGLKVEALGNFPIERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A+ Sbjct: 121 YIIGNDRKPADGPNNQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNLDNRDHGKKERMAQLNGNNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|11498290|ref|NP_069516.1| succinate dehydrogenase iron-sulfur subunit [Archaeoglobus fulgidus DSM 4304] gi|2649932|gb|AAB90556.1| succinate dehydrogenase, iron-sulfur subunit B (sdhB) [Archaeoglobus fulgidus DSM 4304] Length = 236 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 7/229 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + E+RI R++ ++ V G VL+ L YIK +D +L R SCR GICG Sbjct: 1 MVEFRIRRFD---GTKAYWQSFEVPAKR-GMTVLEALYYIKENLDSSLAFRASCRMGICG 56 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC M I+ LAC + + A+ V PL + VIKDL+ + F+++H++++P+L Sbjct: 57 SCAMKINDKPRLACETQVLTLGNAVKVEPLDNFKVIKDLITEFDGFFAKHKAVKPYLIRK 116 Query: 147 SPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 A+ LQ+ E+ + C+ C C + CP+ D YLGPA + AYR+ Sbjct: 117 DDNYAEPKELLQTPEELNEYYVFTLCIKCGACYSVCPAAATL-DGYLGPAAMTAAYRFCA 175 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 DSRD+ Q ER + ++RCH M C++ CPK + PAKA+ ++ Sbjct: 176 DSRDDGQRERYEIASSSNGVWRCHLAMECSEVCPKNVEPAKAVQMLRKK 224 >gi|170783168|ref|YP_001711502.1| succinate dehydrogenase iron-sulfur subunit [Clavibacter michiganensis subsp. sepedonicus] gi|169157738|emb|CAQ02940.1| succinate dehydrogenase iron-sulfur protein [Clavibacter michiganensis subsp. sepedonicus] Length = 232 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 135/233 (57%), Gaps = 6/233 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 I R+ P P + + V++ + LD L IK + D +LT RRSC G+CGS Sbjct: 2 TLIIRRYLPGQDAEPRWEDFDVEVYPTDRI-LDALHKIKWEQDGSLTFRRSCAHGVCGSD 60 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LKT 145 M I+G N +AC +KD I I V + + + KDLVVDM F+ R ++P+ + Sbjct: 61 AMRINGRNRMACKTLIKDLDISQPIYVEAIKGLPLEKDLVVDMEPFFESFRDVQPFLISN 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P+ KE +QS +R + D +C++CA C++SCP +W + +Y GPA ++ A+R++ D Sbjct: 121 TKPEKGKERIQSAAERARFDDTTKCILCAACTSSCPVFWTDG-QYFGPAAIVNAHRFIFD 179 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 SRDE RLD L D ++RC T NC+++CP+G+ +AIA++K ++ K Sbjct: 180 SRDESNV-RLDILNDKEGVWRCRTTFNCSEACPRGIQVTQAIAEVKQAIMRGK 231 >gi|261823169|ref|YP_003261275.1| fumarate reductase iron-sulfur subunit [Pectobacterium wasabiae WPP163] gi|261607182|gb|ACX89668.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium wasabiae WPP163] Length = 245 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 5/231 (2%) Query: 24 EKNLKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +K + + R+NP+ P +T+ V + +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMIKTLKMDVMRYNPEQDSEPYFETFDVPYN-TQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNKVPKLACKTFLREYTNGLKVEALGNFPIERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A+ Sbjct: 121 YIIGNDRKPADGPNNQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNLDNRDRGKKERMAQLNGNNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|14601092|ref|NP_147618.1| succinate dehydrogenase iron-sulfur subunit [Aeropyrum pernix K1] gi|5104615|dbj|BAA79930.1| succinate dehydrogenase subunit B [Aeropyrum pernix K1] Length = 305 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 130/245 (53%), Gaps = 11/245 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + I +++P+ G + V+ G VLD LL IK + D +LTLR SCR Sbjct: 12 APPKRVRFVIRKYDPE-SGRSWWQEHEVE-TYRGMTVLDALLKIKEEQDHSLTLRYSCRM 69 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA----IAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +CGSCGM I+GT LAC + + + V PL + V+KDL+ D + F+ +HR Sbjct: 70 AVCGSCGMTINGTPRLACQTQVAQVAREDAPVVRVEPLYNFKVVKDLLTDFTEFFEKHRR 129 Query: 139 IEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P+L P E E+ ++ C+ C C +CP + + ++LGP Sbjct: 130 VKPYLIRRDVDEQENPTLEYKLLPEEYEQFYQYSLCIACGLCVAACPIF-ASDTKFLGPQ 188 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L QAYR+++D RDE ERL+ ++ ++ CH +C+ CPK ++PA AI +++ +L Sbjct: 189 ALSQAYRFVVDPRDEGYVERLEIVDSIDGVFGCHFAASCSAVCPKEVDPAGAIQRLRSLL 248 Query: 255 LDRKI 259 L ++ Sbjct: 249 LKYRL 253 >gi|261344989|ref|ZP_05972633.1| fumarate reductase, iron-sulfur protein [Providencia rustigianii DSM 4541] gi|282567134|gb|EFB72669.1| fumarate reductase, iron-sulfur protein [Providencia rustigianii DSM 4541] Length = 244 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 I R+NP+ P + TY V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EIMRFNPETDSEPHLVTYDVPYDA-QTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK- 149 +D LAC +++ + V PL + + +DLVVDM+ F + +I+P++ K Sbjct: 69 MVDNVPKLACKTFLREYPQGMKVEPLGNFPIERDLVVDMTSFIERLEAIKPYIIGNDRKL 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N +LGPA + A R+ +D+RD Sbjct: 129 SEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFLGPAAITLAERYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GAKERMPLLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|227113810|ref|ZP_03827466.1| fumarate reductase iron-sulfur subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 245 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 5/231 (2%) Query: 24 EKNLKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +K + + R+NP+ P +T+ V + +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMIKTLKMEVMRYNPEQDSEPYFETFDVPYN-TQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNNVPKLACKTFLREYTNGLKVEALGNFPIERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A+ Sbjct: 121 YIIGNDRKPADGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNLDNRDHGKKERMAQLNGNNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|238756161|ref|ZP_04617481.1| Fumarate reductase iron-sulfur subunit [Yersinia ruckeri ATCC 29473] gi|238705635|gb|EEP98032.1| Fumarate reductase iron-sulfur subunit [Yersinia ruckeri ATCC 29473] Length = 241 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KVLKMEVMRYNPEKDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK- 144 GSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNRVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERNPKEGPSRQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DTRDHGKKERMPQLNGNNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|254362604|ref|ZP_04978698.1| succinate dehydrogenase [Mannheimia haemolytica PHL213] gi|153094212|gb|EDN75094.1| succinate dehydrogenase [Mannheimia haemolytica PHL213] Length = 243 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP++ P +D Y V D +LD L +IK++++P L+ R SCR ICGSC Sbjct: 8 TIEVLRYNPESDSEPHLDRYEVPYD-SQTSLLDALGFIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYIIDNKA 126 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 127 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRD 185 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L + C + C++ CPK + PA A+ + K Sbjct: 186 NGREERMKLLSSKNGDWSCTFVGYCSEVCPKHVGPASAVNQGK 228 >gi|54310446|ref|YP_131466.1| fumarate reductase iron-sulfur subunit [Photobacterium profundum SS9] gi|46914887|emb|CAG21664.1| putative fumarate reductase, iron-sulfur protein [Photobacterium profundum SS9] Length = 246 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++ I R++P+ P + + V ++ VLD L YIK+ +D L R SCR IC Sbjct: 5 RIQKVEILRYDPEKDAEPYFELFEVPFNDT-MSVLDALGYIKDNLDKDLAYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ + + L + ++ KDL+VDM+ F + +I+P++ Sbjct: 64 GSCGMMVNKVPKLACKTFLREYPNGLKIEALANFAIEKDLIVDMTPFIERLEAIKPYIIG 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + Q+ E K C+ C C ++CP + N ++GPA L A+R+ + Sbjct: 124 NNRTPEDGPNNQTPEQMAKYKQFAGCINCGLCYSACPQFGLNP-EFIGPAALTLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 DSRD ER+ + + C + C+ CPK ++PA A+ + K Sbjct: 183 DSRDNGAQERMKLINGENGAWGCTFVGYCSVVCPKSVDPAAAVNQGK 229 >gi|229220667|ref|YP_088845.2| fumarate reductase iron-sulfur subunit [Mannheimia succiniciproducens MBEL55E] Length = 256 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+++DP L R SCR ICG Sbjct: 6 MMNVEVLRYNPEVDKEPYLRTYQVPYDN-QTSLLDALGYIKDRLDPELAYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DL+VD+SHF +I+P++ Sbjct: 65 SCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLIVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + +K C+ C C +CP + N ++GPA Sbjct: 125 EMPALDGQPHPSAELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFVGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L A+R+ +D+RD + ER+ + ++ C + C++ CPK +NPA AI + K Sbjct: 184 ALTMAHRYNLDNRDHGKAERMPIINGENGVWTCTFVGACSEVCPKHVNPAAAINQGK 240 >gi|238757506|ref|ZP_04618691.1| Fumarate reductase iron-sulfur subunit [Yersinia aldovae ATCC 35236] gi|238704268|gb|EEP96800.1| Fumarate reductase iron-sulfur subunit [Yersinia aldovae ATCC 35236] Length = 241 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 L + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KLLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK- 144 GSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERKPQDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|315426111|dbj|BAJ47756.1| succinate dehydrogenase iron-sulfur protein [Candidatus Caldiarchaeum subterraneum] gi|315427827|dbj|BAJ49420.1| succinate dehydrogenase iron-sulfur protein [Candidatus Caldiarchaeum subterraneum] Length = 237 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 94/235 (40%), Positives = 134/235 (57%), Gaps = 7/235 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +R++R++PD G TY V G VL GLL+IK KIDPTL++R SCR CGS Sbjct: 4 VRFRVFRYDPDKDGRRSYQTYTVP-TFKGMTVLQGLLHIKEKIDPTLSIRFSCRMATCGS 62 Query: 88 CGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CGM I+G LAC +++ I V PL ++ +IKDLV D F+S+HR ++P+L + Sbjct: 63 CGMMINGLPRLACYTLIEELKTRTITVEPLRNLPIIKDLVTDFEEFFSKHRWVKPYLIRL 122 Query: 147 SPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ LQS E+ ++ C+ C C +CP +LGP L QAYR+ Sbjct: 123 DTYEQEKSNVSYLQSDEELERYIQFAYCIKCGLCYAACPVTAT-DKEFLGPQALAQAYRY 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DSRDE +RL L + RL RCH +C++ CPKG++PA AI ++ +L R Sbjct: 182 YADSRDEGGVDRLRPLAEGSRLLRCHFAGSCSKVCPKGVDPALAIQMLRREVLLR 236 >gi|227326233|ref|ZP_03830257.1| fumarate reductase iron-sulfur subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 245 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 5/231 (2%) Query: 24 EKNLKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +K + + R+NP+ P +T+ V + +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMIKTLKMEVMRYNPEQDNEPYFETFDVPYN-TQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNNVPKLACKTFLREYTNGLKVEALGNFPIERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A+ Sbjct: 121 YIIGNDRKPADGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNLDNRDHGKKERMAQLNGNNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|283834775|ref|ZP_06354516.1| fumarate reductase, iron-sulfur protein [Citrobacter youngae ATCC 29220] gi|291069020|gb|EFE07129.1| fumarate reductase, iron-sulfur protein [Citrobacter youngae ATCC 29220] Length = 244 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSPNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|268590818|ref|ZP_06125039.1| fumarate reductase, iron-sulfur protein [Providencia rettgeri DSM 1131] gi|291313598|gb|EFE54051.1| fumarate reductase, iron-sulfur protein [Providencia rettgeri DSM 1131] Length = 244 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 I R+NP+ P + TY V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EIMRYNPETDSEPHLVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PK 149 +D LAC +++ + V PL + + +DLVVDM+HF + +I+P++ Sbjct: 69 MVDKVPKLACKTFLREYPQGMKVEPLGNFPIERDLVVDMTHFIERLEAIKPYIIGNDRKP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A R+ +D+RD Sbjct: 129 SEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAERYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GAKERMTLLNGDNGVWSCTFVGYCSEVCPKHVDPAGAIQQGK 229 >gi|157368665|ref|YP_001476654.1| fumarate reductase iron-sulfur subunit [Serratia proteamaculans 568] gi|157320429|gb|ABV39526.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Serratia proteamaculans 568] Length = 244 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E N + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMNTLKIEVMRYNPERDSEPHFETFAVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNRVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNNRKPEDGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD Q +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGQKQRMAQLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|238793395|ref|ZP_04637021.1| Fumarate reductase iron-sulfur subunit [Yersinia intermedia ATCC 29909] gi|238727364|gb|EEQ18892.1| Fumarate reductase iron-sulfur subunit [Yersinia intermedia ATCC 29909] Length = 236 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+NP++ P +T+ V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 2 EVMRYNPESDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 60 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK-TVSPK 149 ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 MVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIGNERKP 120 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 121 QDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRDH 179 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 GKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 221 >gi|123440747|ref|YP_001004739.1| fumarate reductase iron-sulfur subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087708|emb|CAL10493.1| fumarate reductase iron-sulfur protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 244 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 L + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 5 KLLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 64 GSCGMMVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 123 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 124 NDRKPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 183 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|293391382|ref|ZP_06635716.1| fumarate reductase iron-sulfur subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951916|gb|EFE02035.1| fumarate reductase iron-sulfur subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 256 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 14/241 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E+ + I R+NP+ P + TY V D +LD L YIK+K++P L+ R SCR Sbjct: 2 AEQPIMNVEILRYNPEVDKEPHLKTYQVPFD-SQTSLLDALGYIKDKLEPELSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P+ Sbjct: 61 AICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPY 120 Query: 143 LKTVSPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + ++ +K C+ C C +CP + N + Sbjct: 121 IIGNKMPELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EF 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA AI + Sbjct: 180 VGPAALTLAHRYNLDNRDHGKAERMKIMNGENGVWSCTFVGACSEVCPKHVGPATAINQG 239 Query: 251 K 251 K Sbjct: 240 K 240 >gi|52307760|gb|AAU38260.1| FrdB protein [Mannheimia succiniciproducens MBEL55E] Length = 276 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+++DP L R SCR ICG Sbjct: 26 MMNVEVLRYNPEVDKEPYLRTYQVPYDN-QTSLLDALGYIKDRLDPELAYRWSCRMAICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DL+VD+SHF +I+P++ Sbjct: 85 SCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLIVDLSHFIESLEAIKPYIIGN 144 Query: 147 SPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + +K C+ C C +CP + N ++GPA Sbjct: 145 EMPALDGQPHPSAELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFVGPA 203 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L A+R+ +D+RD + ER+ + ++ C + C++ CPK +NPA AI + K Sbjct: 204 ALTMAHRYNLDNRDHGKAERMPIINGENGVWTCTFVGACSEVCPKHVNPAAAINQGK 260 >gi|294634438|ref|ZP_06712974.1| fumarate reductase, iron-sulfur protein [Edwardsiella tarda ATCC 23685] gi|291092148|gb|EFE24709.1| fumarate reductase, iron-sulfur protein [Edwardsiella tarda ATCC 23685] Length = 244 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P TY V D +LD LLY+K+ + P L+ R SCR Sbjct: 2 AEMKNLKMEVMRYNPEQDAEPHFATYDVPYDET-TSLLDALLYVKDNLAPDLSFRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM +D LAC ++D + + L + V +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVDNVPKLACKTFLRDYPNGMRIEALANFPVERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ + +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 VIGNDRKPEEGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|254457927|ref|ZP_05071354.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] gi|207085320|gb|EDZ62605.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] Length = 326 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 8/242 (3%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++++R+N D P + Y +D+ + +VLD L IK D + + RRSCR G Sbjct: 7 TTQKVNFKVFRFNADEDYLPYYEDYNMDVTSEE-VVLDILNRIKWDHDGSFSYRRSCRHG 65 Query: 84 ICGSCGMNIDGTNTLACV----KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ICG+C + ++G +TLAC ++ + + PL +KD+++D F+ +H +I Sbjct: 66 ICGACAIKVNGRSTLACKENMSTMIELFGSELTIEPLSIKRAVKDMIIDKGDFWEKHDAI 125 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+L + P E + + E+ ++ C+ C C +CP+ N DR+LGPA + Sbjct: 126 HPYLISDVDEHPEHEHIVTPEEADRLLEADLCIQCGACHYACPALEVN-DRFLGPAAFAK 184 Query: 199 AYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 AYR+ D RD+ + ERL L ++ C C + CPK +NP I K+ +ML Sbjct: 185 AYRFEADVRDQARNERLQELHSEEQGIWDCVKCFECAEVCPKDVNPIDKITKLHLMLFKE 244 Query: 258 KI 259 + Sbjct: 245 GV 246 >gi|269137695|ref|YP_003294395.1| fumarate reductase iron-sulfur subunit [Edwardsiella tarda EIB202] gi|267983355|gb|ACY83184.1| fumarate reductase iron-sulfur subunit [Edwardsiella tarda EIB202] gi|304557751|gb|ADM40415.1| Succinate dehydrogenase iron-sulfur protein [Edwardsiella tarda FL6-60] Length = 244 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P TY V D+ +LD LLY+K+ + P L+ R SCR Sbjct: 2 AEMKNLKMEVMRYNPEQDAEPRFVTYEVPYDDT-TSLLDALLYVKDNLAPDLSFRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM +D LAC ++D + V L + V +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVDNVPKLACKTFLRDHPNGMRVEALANFPVERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ + +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 VIGNDRKPEDGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|307594445|ref|YP_003900762.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Vulcanisaeta distributa DSM 14429] gi|307549646|gb|ADN49711.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Vulcanisaeta distributa DSM 14429] Length = 270 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 92/237 (38%), Positives = 123/237 (51%), Gaps = 9/237 (3%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 K +R+ R++P+ G Y ++L N VLDGL+ IK D TL+ R SCR GI Sbjct: 31 KRTYTFRVKRYDPERGGY-YWREYKIELSNHE-TVLDGLIKIKWYQDATLSFRYSCRMGI 88 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSCGM I+GT LAC D+ I V PL + IKDL D S F+ +HRS+ PWL Sbjct: 89 CGSCGMIINGTPRLACETKPYDLGTEVITVEPLSNFEPIKDLAADFSEFFRKHRSVRPWL 148 Query: 144 KTVSPKPAK-----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 Q+ E + C+ C C ++CP + N D YLGP L Q Sbjct: 149 IRKDETEQFEKLESYYPQTEEQLSEYLEFAYCIKCGLCYSACPMVFLNRD-YLGPQALAQ 207 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 AYRW D+RDE RL ++ ++ CH C++ CPK ++PA AI +K LL Sbjct: 208 AYRWSADNRDEGAVLRLKVVDSENGIWSCHYSGTCSKVCPKDVDPALAINLLKNWLL 264 >gi|74314643|ref|YP_313062.1| fumarate reductase iron-sulfur subunit [Shigella sonnei Ss046] gi|73858120|gb|AAZ90827.1| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella sonnei Ss046] Length = 244 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L+YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALVYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|238787525|ref|ZP_04631323.1| Fumarate reductase iron-sulfur subunit [Yersinia frederiksenii ATCC 33641] gi|238724312|gb|EEQ15954.1| Fumarate reductase iron-sulfur subunit [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KVLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 146 VSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERKAKDGPTKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DTRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|319943871|ref|ZP_08018152.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lautropia mirabilis ATCC 51599] gi|319743104|gb|EFV95510.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lautropia mirabilis ATCC 51599] Length = 311 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 5/228 (2%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E R+NPD P +Y V VLDGL YIK+ +D T+T R SCR Sbjct: 56 AETRTITIECMRYNPDTDSAPRYQSYEVPFT-HDMSVLDGLQYIKDHLDGTITYRWSCRM 114 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 +CGSCGM + L+C ++D + + PL H +++DL VD S F ++ ++P Sbjct: 115 AVCGSCGMMANDMPVLSCQAFLRDYYPGTLRIAPLSHFPIVRDLAVDQSDFLAKLERVKP 174 Query: 142 WLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 ++ T P LQ+ + +C+ C C +CP Y N + GPA L Sbjct: 175 YIITEEPRTPADGPNLQTPAQMDQYYQFSQCINCMLCYAACPQYGLNP-EFTGPAALALL 233 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R+ DSRDE + ER+ + ++ C + C+ CPKG++PA+AI Sbjct: 234 QRYNADSRDEGKAERMPVINAESGVWGCTLVGECSVVCPKGVDPARAI 281 >gi|20150749|pdb|1KF6|B Chain B, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor Hqno gi|20150753|pdb|1KF6|N Chain N, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor Hqno gi|20150761|pdb|1KFY|B Chain B, Quinol-Fumarate Reductase With Quinol Inhibitor 2-[1-(4- Chloro-Phenyl)-Ethyl]-4,6-Dinitro-Phenol gi|20150765|pdb|1KFY|N Chain N, Quinol-Fumarate Reductase With Quinol Inhibitor 2-[1-(4- Chloro-Phenyl)-Ethyl]-4,6-Dinitro-Phenol gi|20151164|pdb|1L0V|B Chain B, Quinol-Fumarate Reductase With Menaquinol Molecules gi|20151168|pdb|1L0V|N Chain N, Quinol-Fumarate Reductase With Menaquinol Molecules gi|90108807|pdb|2B76|B Chain B, E. Coli Quinol Fumarate Reductase Frda E49q Mutation gi|90108811|pdb|2B76|N Chain N, E. Coli Quinol Fumarate Reductase Frda E49q Mutation gi|171849105|pdb|3CIR|B Chain B, E. Coli Quinol Fumarate Reductase Frda T234a Mutation gi|171849109|pdb|3CIR|N Chain N, E. Coli Quinol Fumarate Reductase Frda T234a Mutation gi|312597517|pdb|3P4R|B Chain B, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With Glutarate gi|312597521|pdb|3P4R|N Chain N, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With Glutarate gi|313103954|pdb|3P4P|B Chain B, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With Fumarate gi|313103958|pdb|3P4P|N Chain N, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With Fumarate gi|313754491|pdb|3P4Q|B Chain B, Crystal Structure Of Menaquinol:oxidoreductase In Complex With Oxaloacetate gi|313754495|pdb|3P4Q|N Chain N, Crystal Structure Of Menaquinol:oxidoreductase In Complex With Oxaloacetate gi|313754499|pdb|3P4S|B Chain B, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With A 3-Nitropropionate Adduct gi|313754503|pdb|3P4S|N Chain N, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With A 3-Nitropropionate Adduct Length = 243 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 1 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 59 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 60 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 119 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 120 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 178 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 179 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 228 >gi|332160009|ref|YP_004296586.1| fumarate reductase iron-sulfur subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607434|emb|CBY28932.1| succinate dehydrogenase iron-sulfur protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664239|gb|ADZ40883.1| fumarate reductase iron-sulfur subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862357|emb|CBX72516.1| fumarate reductase iron-sulfur subunit [Yersinia enterocolitica W22703] Length = 244 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 L + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 5 KLLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK- 144 GSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 64 GSCGMMVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 124 NERKPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 183 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|329765860|ref|ZP_08257426.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137703|gb|EGG41973.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 254 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 6/243 (2%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 + RI R+NP+ + + + VL+ +L +K D ++ + Sbjct: 10 TNTSSNSTLKSITLRIARFNPEQDDAKKFMEFTISYER-WTTVLEAILDVKQHFDHSVAV 68 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQ 135 R SCR+ CGSCGM I+G LAC + ++ I V P+ + +I+DL V + Sbjct: 69 RYSCRQATCGSCGMIINGKPRLACFTKISELNSNIVTVEPMNNFPIIRDLAVKFERLFDT 128 Query: 136 HRSIEPWLKTVSPKPA---KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 H ++P+L + KE LQS E+ ++ C+ C C+++CP+ ++G Sbjct: 129 HHKVKPYLIRDDTEIETSAKEFLQSPEELEQYIQFSNCIKCGLCNSACPTMAT-DSSFVG 187 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P L QAYR++ DSRD+ + +RL ++D ++RCH +C+Q CPKG++PA I ++ Sbjct: 188 PQALAQAYRYVADSRDKGRDQRLKIIDDSHGIWRCHFAGSCSQVCPKGVDPAMGIQLLRG 247 Query: 253 MLL 255 +L Sbjct: 248 YML 250 >gi|238796046|ref|ZP_04639557.1| Fumarate reductase iron-sulfur subunit [Yersinia mollaretii ATCC 43969] gi|238719991|gb|EEQ11796.1| Fumarate reductase iron-sulfur subunit [Yersinia mollaretii ATCC 43969] Length = 241 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KVLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK- 144 GSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERKPQDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|161505154|ref|YP_001572266.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866501|gb|ABX23124.1| hypothetical protein SARI_03291 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 244 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTPAQGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|325579195|ref|ZP_08149151.1| fumarate reductase subunit B [Haemophilus parainfluenzae ATCC 33392] gi|301155595|emb|CBW15063.1| fumarate reductase (anaerobic), Fe-S subunit [Haemophilus parainfluenzae T3T1] gi|325159430|gb|EGC71564.1| fumarate reductase subunit B [Haemophilus parainfluenzae ATCC 33392] Length = 256 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+N P + +Y V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMTVEVLRYNPENDQEPHLSSYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 184 AITMAHRYNLDNRDHGKAQRMPLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 240 >gi|283786836|ref|YP_003366701.1| fumarate reductase iron-sulfur subunit [Citrobacter rodentium ICC168] gi|282950290|emb|CBG89937.1| fumarate reductase iron-sulfur subunit [Citrobacter rodentium ICC168] Length = 244 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTSGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|16767591|ref|NP_463206.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416137|ref|YP_153212.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182791|ref|YP_219208.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617613|ref|YP_001591578.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167994776|ref|ZP_02575867.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231378|ref|ZP_02656436.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237073|ref|ZP_02662131.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244878|ref|ZP_02669810.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263304|ref|ZP_02685277.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467058|ref|ZP_02700906.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822528|ref|ZP_02834528.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445371|ref|YP_002043600.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451152|ref|YP_002048388.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469166|ref|ZP_03075150.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735068|ref|YP_002117287.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248648|ref|YP_002149259.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264396|ref|ZP_03164470.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365063|ref|YP_002144700.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245850|ref|YP_002218229.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386999|ref|ZP_03213611.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927061|ref|ZP_03218263.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205355104|ref|YP_002228905.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859491|ref|YP_002246142.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224586186|ref|YP_002639985.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912807|ref|ZP_04656644.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16422904|gb|AAL23165.1| fumarate reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130394|gb|AAV79900.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130424|gb|AAX68127.1| fumarate reductase, anaerobic, Fe-S protein subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161366977|gb|ABX70745.1| hypothetical protein SPAB_05473 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404034|gb|ACF64256.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409456|gb|ACF69675.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455530|gb|EDX44369.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710570|gb|ACF89791.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630514|gb|EDX49126.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096540|emb|CAR62149.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212351|gb|ACH49748.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242651|gb|EDY25271.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289918|gb|EDY29277.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940366|gb|ACH77699.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604097|gb|EDZ02642.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323726|gb|EDZ08921.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274885|emb|CAR39951.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205327422|gb|EDZ14186.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334354|gb|EDZ21118.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336303|gb|EDZ23067.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341091|gb|EDZ27855.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347934|gb|EDZ34565.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711294|emb|CAR35672.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470714|gb|ACN48544.1| succinate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261249437|emb|CBG27301.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996675|gb|ACY91560.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160834|emb|CBW20365.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915443|dbj|BAJ39417.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088772|emb|CBY98530.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223217|gb|EFX48287.1| Succinate dehydrogenase iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615508|gb|EFY12428.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618568|gb|EFY15457.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622019|gb|EFY18869.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627091|gb|EFY23883.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631050|gb|EFY27814.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637731|gb|EFY34432.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642395|gb|EFY38999.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645656|gb|EFY42181.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650504|gb|EFY46912.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653456|gb|EFY49786.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659717|gb|EFY55960.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662072|gb|EFY58288.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666179|gb|EFY62357.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672599|gb|EFY68710.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676029|gb|EFY72100.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680513|gb|EFY76551.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684593|gb|EFY80597.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322717292|gb|EFZ08863.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132683|gb|ADX20113.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192908|gb|EFZ78134.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197216|gb|EFZ82356.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201667|gb|EFZ86731.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206181|gb|EFZ91143.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213190|gb|EFZ97992.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215563|gb|EGA00307.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219548|gb|EGA04033.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227851|gb|EGA12005.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229021|gb|EGA13150.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236367|gb|EGA20443.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237513|gb|EGA21574.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241821|gb|EGA25850.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248030|gb|EGA31967.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254639|gb|EGA38450.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258302|gb|EGA41979.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259579|gb|EGA43213.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265852|gb|EGA49348.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270296|gb|EGA53744.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326626033|gb|EGE32378.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630261|gb|EGE36604.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991156|gb|AEF10139.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 244 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTPDQGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|82779426|ref|YP_405775.1| fumarate reductase iron-sulfur subunit [Shigella dysenteriae Sd197] gi|309787698|ref|ZP_07682309.1| fumarate reductase iron-sulfur subunit [Shigella dysenteriae 1617] gi|81243574|gb|ABB64284.1| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella dysenteriae Sd197] gi|308924448|gb|EFP69944.1| fumarate reductase iron-sulfur subunit [Shigella dysenteriae 1617] Length = 244 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + ++GPA + A+R Sbjct: 121 IIGNSRTSDQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLTP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|323171589|gb|EFZ57235.1| fumarate reductase iron-sulfur subunit [Escherichia coli LT-68] Length = 241 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR ICGSC Sbjct: 5 KIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 GM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ S Sbjct: 64 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +Q+ K C+ C C +CP + N ++GPA + A+R+ DSR Sbjct: 124 TADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 183 DHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|226329421|ref|ZP_03804939.1| hypothetical protein PROPEN_03326 [Proteus penneri ATCC 35198] gi|225202607|gb|EEG84961.1| hypothetical protein PROPEN_03326 [Proteus penneri ATCC 35198] Length = 245 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 3/231 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR Sbjct: 2 ADDMKHIKMEVMRYNPETDEAPHFVTYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC +++ I V L + V +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNKVPKLACKTFIREYPNGIRVEALGNFPVERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A Sbjct: 121 YIIGNDRKPSEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAQ 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ D+RD ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNTDNRDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|15804747|ref|NP_290788.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 EDL933] gi|15834388|ref|NP_313161.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 str. Sakai] gi|16131978|ref|NP_418577.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|26251049|ref|NP_757089.1| fumarate reductase iron-sulfur subunit [Escherichia coli CFT073] gi|30065530|ref|NP_839701.1| fumarate reductase iron-sulfur subunit [Shigella flexneri 2a str. 2457T] gi|56480580|ref|NP_710022.2| fumarate reductase iron-sulfur subunit [Shigella flexneri 2a str. 301] gi|82546601|ref|YP_410548.1| fumarate reductase iron-sulfur subunit [Shigella boydii Sb227] gi|89110876|ref|AP_004656.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli str. K-12 substr. W3110] gi|110644514|ref|YP_672244.1| fumarate reductase iron-sulfur subunit [Escherichia coli 536] gi|110808077|ref|YP_691597.1| fumarate reductase iron-sulfur subunit [Shigella flexneri 5 str. 8401] gi|157156621|ref|YP_001465655.1| fumarate reductase iron-sulfur subunit [Escherichia coli E24377A] gi|157163621|ref|YP_001460939.1| fumarate reductase iron-sulfur subunit [Escherichia coli HS] gi|168747983|ref|ZP_02773005.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4113] gi|168755343|ref|ZP_02780350.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4401] gi|168761023|ref|ZP_02786030.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4501] gi|168766433|ref|ZP_02791440.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4486] gi|168774532|ref|ZP_02799539.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4196] gi|168780586|ref|ZP_02805593.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4076] gi|168784791|ref|ZP_02809798.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC869] gi|168802336|ref|ZP_02827343.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC508] gi|170021834|ref|YP_001726788.1| fumarate reductase iron-sulfur subunit [Escherichia coli ATCC 8739] gi|170679761|ref|YP_001746551.1| fumarate reductase iron-sulfur subunit [Escherichia coli SMS-3-5] gi|170766766|ref|ZP_02901219.1| fumarate reductase, iron-sulfur protein [Escherichia albertii TW07627] gi|187731269|ref|YP_001882847.1| fumarate reductase iron-sulfur subunit [Shigella boydii CDC 3083-94] gi|188493789|ref|ZP_03001059.1| fumarate reductase iron-sulfur protein [Escherichia coli 53638] gi|191165586|ref|ZP_03027426.1| fumarate reductase, iron-sulfur protein [Escherichia coli B7A] gi|191173375|ref|ZP_03034904.1| fumarate reductase, iron-sulfur protein [Escherichia coli F11] gi|193065745|ref|ZP_03046809.1| fumarate reductase, iron-sulfur protein [Escherichia coli E22] gi|193067785|ref|ZP_03048751.1| fumarate reductase, iron-sulfur protein [Escherichia coli E110019] gi|194428956|ref|ZP_03061489.1| fumarate reductase, iron-sulfur protein [Escherichia coli B171] gi|194437350|ref|ZP_03069448.1| fumarate reductase, iron-sulfur protein [Escherichia coli 101-1] gi|195935947|ref|ZP_03081329.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 str. EC4024] gi|208805672|ref|ZP_03248009.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4206] gi|208814237|ref|ZP_03255566.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4045] gi|208818699|ref|ZP_03259019.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4042] gi|209399718|ref|YP_002273700.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4115] gi|209921646|ref|YP_002295730.1| fumarate reductase iron-sulfur subunit [Escherichia coli SE11] gi|215489502|ref|YP_002331933.1| fumarate reductase iron-sulfur subunit [Escherichia coli O127:H6 str. E2348/69] gi|217324572|ref|ZP_03440656.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. TW14588] gi|218551425|ref|YP_002385217.1| fumarate reductase iron-sulfur subunit [Escherichia fergusonii ATCC 35469] gi|218556710|ref|YP_002389624.1| fumarate reductase iron-sulfur subunit [Escherichia coli IAI1] gi|218692492|ref|YP_002400704.1| fumarate reductase iron-sulfur subunit [Escherichia coli ED1a] gi|218697905|ref|YP_002405572.1| fumarate reductase iron-sulfur subunit [Escherichia coli 55989] gi|218702855|ref|YP_002410484.1| fumarate reductase iron-sulfur subunit [Escherichia coli IAI39] gi|218707769|ref|YP_002415288.1| fumarate reductase iron-sulfur subunit [Escherichia coli UMN026] gi|227886801|ref|ZP_04004606.1| succinate dehydrogenase [Escherichia coli 83972] gi|238903263|ref|YP_002929059.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli BW2952] gi|253775217|ref|YP_003038048.1| fumarate reductase iron-sulfur subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037169|ref|ZP_04871246.1| fumarate reductase iron-sulfur subunit [Escherichia sp. 1_1_43] gi|254164087|ref|YP_003047195.1| fumarate reductase iron-sulfur subunit [Escherichia coli B str. REL606] gi|254796177|ref|YP_003081014.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 str. TW14359] gi|256019801|ref|ZP_05433666.1| fumarate reductase iron-sulfur subunit [Shigella sp. D9] gi|256025091|ref|ZP_05438956.1| fumarate reductase iron-sulfur subunit [Escherichia sp. 4_1_40B] gi|260846988|ref|YP_003224766.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O103:H2 str. 12009] gi|260858309|ref|YP_003232200.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O26:H11 str. 11368] gi|260870936|ref|YP_003237338.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O111:H- str. 11128] gi|261225278|ref|ZP_05939559.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261255470|ref|ZP_05948003.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O157:H7 str. FRIK966] gi|291285570|ref|YP_003502388.1| Fumarate reductase iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|293402785|ref|ZP_06646882.1| fumarate reductase iron-sulfur subunit [Escherichia coli FVEC1412] gi|293407882|ref|ZP_06651722.1| conserved hypothetical protein [Escherichia coli B354] gi|293417661|ref|ZP_06660283.1| fumarate reductase iron-sulfur protein [Escherichia coli B185] gi|293476468|ref|ZP_06664876.1| fumarate reductase iron-sulfur subunit [Escherichia coli B088] gi|297516543|ref|ZP_06934929.1| fumarate reductase iron-sulfur subunit [Escherichia coli OP50] gi|298378315|ref|ZP_06988199.1| fumarate reductase iron-sulfur subunit [Escherichia coli FVEC1302] gi|300816545|ref|ZP_07096766.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 107-1] gi|300821249|ref|ZP_07101397.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 119-7] gi|300899693|ref|ZP_07117920.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 198-1] gi|300905986|ref|ZP_07123710.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 84-1] gi|300920822|ref|ZP_07137222.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 115-1] gi|300922437|ref|ZP_07138557.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 182-1] gi|300929265|ref|ZP_07144741.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 187-1] gi|300940644|ref|ZP_07155205.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 21-1] gi|300949113|ref|ZP_07163156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 116-1] gi|300957813|ref|ZP_07169992.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 175-1] gi|300974954|ref|ZP_07172793.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 45-1] gi|300975243|ref|ZP_07172907.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 200-1] gi|301023453|ref|ZP_07187234.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 69-1] gi|301027976|ref|ZP_07191260.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 196-1] gi|301047619|ref|ZP_07194685.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 185-1] gi|301302573|ref|ZP_07208703.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 124-1] gi|301325920|ref|ZP_07219341.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 78-1] gi|301646600|ref|ZP_07246466.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 146-1] gi|306815627|ref|ZP_07449776.1| fumarate reductase iron-sulfur subunit [Escherichia coli NC101] gi|307140850|ref|ZP_07500206.1| fumarate reductase iron-sulfur subunit [Escherichia coli H736] gi|307312008|ref|ZP_07591645.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli W] gi|309796968|ref|ZP_07691368.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 145-7] gi|312965831|ref|ZP_07780057.1| fumarate reductase iron-sulfur subunit [Escherichia coli 2362-75] gi|312974038|ref|ZP_07788209.1| fumarate reductase iron-sulfur subunit [Escherichia coli 1827-70] gi|331665822|ref|ZP_08366716.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA143] gi|331671063|ref|ZP_08371896.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA271] gi|331681175|ref|ZP_08381812.1| fumarate reductase iron-sulfur subunit [Escherichia coli H299] gi|332280939|ref|ZP_08393352.1| fumarate reductase (anaerobic) Fe-S subunit [Shigella sp. D9] gi|81175306|sp|P0AC49|FRDB_ECO57 RecName: Full=Fumarate reductase iron-sulfur subunit gi|81175307|sp|P0AC48|FRDB_ECOL6 RecName: Full=Fumarate reductase iron-sulfur subunit gi|81175308|sp|P0AC47|FRDB_ECOLI RecName: Full=Fumarate reductase iron-sulfur subunit gi|81175309|sp|P0AC50|FRDB_SHIFL RecName: Full=Fumarate reductase iron-sulfur subunit gi|12519137|gb|AAG59354.1|AE005648_16 fumarate reductase, anaerobic, iron-sulfur protein subunit [Escherichia coli O157:H7 str. EDL933] gi|26111481|gb|AAN83663.1|AE016771_174 Fumarate reductase iron-sulfur protein [Escherichia coli CFT073] gi|145264|gb|AAA23438.1| fumarate reductase iron-sulfur subunit [Escherichia coli] gi|536997|gb|AAA97052.1| fumarate reductase, iron-sulfur protein [Escherichia coli str. K-12 substr. MG1655] gi|1790596|gb|AAC77113.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|13364611|dbj|BAB38557.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli O157:H7 str. Sakai] gi|30043794|gb|AAP19513.1| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella flexneri 2a str. 2457T] gi|56384131|gb|AAN45729.2| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella flexneri 2a str. 301] gi|81248012|gb|ABB68720.1| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella boydii Sb227] gi|85676907|dbj|BAE78157.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli str. K12 substr. W3110] gi|110346106|gb|ABG72343.1| fumarate reductase iron-sulfur protein [Escherichia coli 536] gi|110617625|gb|ABF06292.1| fumarate reductase, anaerobic, iron-sulfur protein subunit [Shigella flexneri 5 str. 8401] gi|157069301|gb|ABV08556.1| fumarate reductase, iron-sulfur protein [Escherichia coli HS] gi|157078651|gb|ABV18359.1| fumarate reductase, iron-sulfur protein [Escherichia coli E24377A] gi|169756762|gb|ACA79461.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli ATCC 8739] gi|170124204|gb|EDS93135.1| fumarate reductase, iron-sulfur protein [Escherichia albertii TW07627] gi|170517479|gb|ACB15657.1| fumarate reductase, iron-sulfur protein [Escherichia coli SMS-3-5] gi|187428261|gb|ACD07535.1| fumarate reductase, iron-sulfur protein [Shigella boydii CDC 3083-94] gi|187769907|gb|EDU33751.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4196] gi|188017520|gb|EDU55642.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4113] gi|188488988|gb|EDU64091.1| fumarate reductase iron-sulfur protein [Escherichia coli 53638] gi|189001689|gb|EDU70675.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4076] gi|189357388|gb|EDU75807.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4401] gi|189363954|gb|EDU82373.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4486] gi|189368504|gb|EDU86920.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4501] gi|189374923|gb|EDU93339.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC869] gi|189375664|gb|EDU94080.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC508] gi|190904281|gb|EDV63990.1| fumarate reductase, iron-sulfur protein [Escherichia coli B7A] gi|190906351|gb|EDV65961.1| fumarate reductase, iron-sulfur protein [Escherichia coli F11] gi|192926614|gb|EDV81244.1| fumarate reductase, iron-sulfur protein [Escherichia coli E22] gi|192958760|gb|EDV89197.1| fumarate reductase, iron-sulfur protein [Escherichia coli E110019] gi|194413009|gb|EDX29298.1| fumarate reductase, iron-sulfur protein [Escherichia coli B171] gi|194423906|gb|EDX39895.1| fumarate reductase, iron-sulfur protein [Escherichia coli 101-1] gi|208725473|gb|EDZ75074.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4206] gi|208735514|gb|EDZ84201.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4045] gi|208738822|gb|EDZ86504.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4042] gi|209161118|gb|ACI38551.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. EC4115] gi|209750418|gb|ACI73516.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli] gi|209750420|gb|ACI73517.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli] gi|209750422|gb|ACI73518.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli] gi|209750424|gb|ACI73519.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli] gi|209750426|gb|ACI73520.1| iron-sulfur protein subunit of fumarate reductase FrdB [Escherichia coli] gi|209914905|dbj|BAG79979.1| fumarate reductase iron-sulfur subunit [Escherichia coli SE11] gi|215267574|emb|CAS12029.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320793|gb|EEC29217.1| fumarate reductase, iron-sulfur protein [Escherichia coli O157:H7 str. TW14588] gi|218354637|emb|CAV01616.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli 55989] gi|218358967|emb|CAQ91627.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia fergusonii ATCC 35469] gi|218363479|emb|CAR01133.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli IAI1] gi|218372841|emb|CAR20720.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli IAI39] gi|218430056|emb|CAR11045.2| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli ED1a] gi|218434866|emb|CAR15804.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli UMN026] gi|226840275|gb|EEH72277.1| fumarate reductase iron-sulfur subunit [Escherichia sp. 1_1_43] gi|227836143|gb|EEJ46609.1| succinate dehydrogenase [Escherichia coli 83972] gi|238861156|gb|ACR63154.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli BW2952] gi|242379681|emb|CAQ34504.1| fumarate reductase iron-sulfur protein, subunit of fumarate reductase [Escherichia coli BL21(DE3)] gi|253326261|gb|ACT30863.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975988|gb|ACT41659.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli B str. REL606] gi|253980144|gb|ACT45814.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli BL21(DE3)] gi|254595577|gb|ACT74938.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|257756958|dbj|BAI28460.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O26:H11 str. 11368] gi|257762135|dbj|BAI33632.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O103:H2 str. 12009] gi|257767292|dbj|BAI38787.1| fumarate reductase, Fe-S subunit FrdB [Escherichia coli O111:H- str. 11128] gi|281181253|dbj|BAI57583.1| fumarate reductase iron-sulfur subunit [Escherichia coli SE15] gi|281603620|gb|ADA76604.1| Fumarate reductase iron-sulfur subunit [Shigella flexneri 2002017] gi|284924339|emb|CBG37455.1| fumarate reductase iron-sulfur subunit [Escherichia coli 042] gi|290765443|gb|ADD59404.1| Fumarate reductase iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|291320921|gb|EFE60363.1| fumarate reductase iron-sulfur subunit [Escherichia coli B088] gi|291429700|gb|EFF02714.1| fumarate reductase iron-sulfur subunit [Escherichia coli FVEC1412] gi|291430379|gb|EFF03377.1| fumarate reductase iron-sulfur protein [Escherichia coli B185] gi|291472133|gb|EFF14615.1| conserved hypothetical protein [Escherichia coli B354] gi|298280649|gb|EFI22150.1| fumarate reductase iron-sulfur subunit [Escherichia coli FVEC1302] gi|299878886|gb|EFI87097.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 196-1] gi|300300498|gb|EFJ56883.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 185-1] gi|300308742|gb|EFJ63262.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 200-1] gi|300315473|gb|EFJ65257.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 175-1] gi|300356736|gb|EFJ72606.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 198-1] gi|300397005|gb|EFJ80543.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 69-1] gi|300402153|gb|EFJ85691.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 84-1] gi|300410442|gb|EFJ93980.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 45-1] gi|300412214|gb|EFJ95524.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 115-1] gi|300421256|gb|EFK04567.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 182-1] gi|300451423|gb|EFK15043.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 116-1] gi|300454532|gb|EFK18025.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 21-1] gi|300462758|gb|EFK26251.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 187-1] gi|300526138|gb|EFK47207.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 119-7] gi|300530775|gb|EFK51837.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 107-1] gi|300842098|gb|EFK69858.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 124-1] gi|300847273|gb|EFK75033.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 78-1] gi|301075147|gb|EFK89953.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 146-1] gi|305851289|gb|EFM51744.1| fumarate reductase iron-sulfur subunit [Escherichia coli NC101] gi|306907815|gb|EFN38316.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli W] gi|307556325|gb|ADN49100.1| fumarate reductase [Escherichia coli ABU 83972] gi|308119381|gb|EFO56643.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 145-7] gi|309704661|emb|CBJ04011.1| fumarate reductase iron-sulfur subunit [Escherichia coli ETEC H10407] gi|310331572|gb|EFP98828.1| fumarate reductase iron-sulfur subunit [Escherichia coli 1827-70] gi|312289074|gb|EFR16968.1| fumarate reductase iron-sulfur subunit [Escherichia coli 2362-75] gi|313646373|gb|EFS10835.1| fumarate reductase iron-sulfur subunit [Shigella flexneri 2a str. 2457T] gi|315063472|gb|ADT77799.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli W] gi|315255500|gb|EFU35468.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 85-1] gi|315294066|gb|EFU53418.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 153-1] gi|315617568|gb|EFU98174.1| fumarate reductase iron-sulfur subunit [Escherichia coli 3431] gi|320180671|gb|EFW55598.1| Succinate dehydrogenase iron-sulfur protein [Shigella boydii ATCC 9905] gi|320187545|gb|EFW62229.1| Succinate dehydrogenase iron-sulfur protein [Shigella flexneri CDC 796-83] gi|320190710|gb|EFW65360.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. EC1212] gi|320193536|gb|EFW68173.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli WV_060327] gi|320200712|gb|EFW75298.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli EC4100B] gi|320638916|gb|EFX08562.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 str. G5101] gi|320644285|gb|EFX13350.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H- str. 493-89] gi|320649603|gb|EFX18127.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H- str. H 2687] gi|320654999|gb|EFX22960.1| fumarate reductase iron-sulfur subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660506|gb|EFX27967.1| fumarate reductase iron-sulfur subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320665775|gb|EFX32812.1| fumarate reductase iron-sulfur subunit [Escherichia coli O157:H7 str. LSU-61] gi|323156027|gb|EFZ42189.1| fumarate reductase iron-sulfur subunit [Escherichia coli EPECa14] gi|323162077|gb|EFZ47948.1| fumarate reductase iron-sulfur subunit [Escherichia coli E128010] gi|323166765|gb|EFZ52522.1| fumarate reductase iron-sulfur subunit [Shigella sonnei 53G] gi|323176086|gb|EFZ61678.1| fumarate reductase iron-sulfur subunit [Escherichia coli 1180] gi|323182262|gb|EFZ67672.1| fumarate reductase iron-sulfur subunit [Escherichia coli 1357] gi|323189963|gb|EFZ75241.1| fumarate reductase iron-sulfur subunit [Escherichia coli RN587/1] gi|323380455|gb|ADX52723.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli KO11] gi|323940075|gb|EGB36269.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E482] gi|323946094|gb|EGB42130.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H120] gi|323960344|gb|EGB55983.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H489] gi|323965543|gb|EGB60997.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli M863] gi|323970587|gb|EGB65846.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli TA007] gi|323975503|gb|EGB70604.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli TW10509] gi|324008597|gb|EGB77816.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 57-2] gi|324015045|gb|EGB84264.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 60-1] gi|324019335|gb|EGB88554.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 117-3] gi|324112247|gb|EGC06225.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia fergusonii B253] gi|324118723|gb|EGC12615.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E1167] gi|325499691|gb|EGC97550.1| fumarate reductase iron-sulfur subunit [Escherichia fergusonii ECD227] gi|326341792|gb|EGD65575.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. 1125] gi|326346633|gb|EGD70367.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli O157:H7 str. 1044] gi|327250097|gb|EGE61816.1| fumarate reductase iron-sulfur subunit [Escherichia coli STEC_7v] gi|330908499|gb|EGH37018.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli AA86] gi|331056873|gb|EGI28867.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA143] gi|331061652|gb|EGI33578.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA271] gi|331081396|gb|EGI52557.1| fumarate reductase iron-sulfur subunit [Escherichia coli H299] gi|332083155|gb|EGI88386.1| fumarate reductase iron-sulfur subunit [Shigella boydii 5216-82] gi|332087110|gb|EGI92244.1| fumarate reductase iron-sulfur subunit [Shigella boydii 3594-74] gi|332103291|gb|EGJ06637.1| fumarate reductase (anaerobic) Fe-S subunit [Shigella sp. D9] gi|332346234|gb|AEE59568.1| fumarate reductase, iron-sulfur subunit [Escherichia coli UMNK88] gi|332749030|gb|EGJ79453.1| fumarate reductase iron-sulfur subunit [Shigella flexneri K-671] gi|332749298|gb|EGJ79719.1| fumarate reductase iron-sulfur subunit [Shigella flexneri 4343-70] gi|332761881|gb|EGJ92155.1| fumarate reductase iron-sulfur subunit [Shigella flexneri 2747-71] gi|332763201|gb|EGJ93444.1| fumarate reductase iron-sulfur protein [Shigella flexneri 2930-71] gi|333009415|gb|EGK28871.1| fumarate reductase iron-sulfur subunit [Shigella flexneri K-218] gi|333010305|gb|EGK29738.1| fumarate reductase iron-sulfur subunit [Shigella flexneri VA-6] gi|333012046|gb|EGK31431.1| fumarate reductase iron-sulfur subunit [Shigella flexneri K-304] Length = 244 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|146310007|ref|YP_001175081.1| fumarate reductase iron-sulfur subunit [Enterobacter sp. 638] gi|145316883|gb|ABP59030.1| succinate dehydrogenase subunit B [Enterobacter sp. 638] Length = 244 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMQTLKIEVVRYNPEVDAAPHSAFYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC +++ I V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNKVPKLACKTFLREYTKGIKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|270264985|ref|ZP_06193248.1| fumarate reductase iron-sulfur subunit [Serratia odorifera 4Rx13] gi|270040919|gb|EFA14020.1| fumarate reductase iron-sulfur subunit [Serratia odorifera 4Rx13] Length = 241 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 NTLKIEVMRYNPERDAEPHFETFAVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNRVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 146 VS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + +Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NNRKPEDGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DNRDHGKKQRMAQLNGQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|325968843|ref|YP_004245035.1| succinate dehydrogenase and fumarate reductase, iron-sulfur protein subunit (beta) [Vulcanisaeta moutnovskia 768-28] gi|323708046|gb|ADY01533.1| succinate dehydrogenase and fumarate reductase, iron-sulfur protein subunit (beta) [Vulcanisaeta moutnovskia 768-28] Length = 255 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 91/239 (38%), Positives = 122/239 (51%), Gaps = 9/239 (3%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +R+ R++P+ + Y V+L N VLDGLL IK D TL+ R SCR GIC Sbjct: 17 RTYTFRVKRYDPEKRSY-YWREYKVELTNHE-TVLDGLLKIKWNQDATLSFRYSCRMGIC 74 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM I+G LAC D+ I V PL + IKDL D S+F+ +H S++PWL Sbjct: 75 GSCGMIINGVPRLACETKPYDLGTEVITVEPLSNFEPIKDLAADFSNFFEKHISVKPWLI 134 Query: 145 TVSPKPAK-----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 Q+ + C+ C C ++CP + N D YLGP L QA Sbjct: 135 RKDETEQFEKLDTYYPQTEDQLSDYLEFAYCIKCGLCYSACPMVFLNKD-YLGPQALAQA 193 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YRW DSRDE RL ++ ++ CH C++ CPK ++PA AI +K LL K Sbjct: 194 YRWSADSRDEGAVLRLKIVDSENGVWSCHYSGTCSKVCPKDVDPALAINLLKNWLLSGK 252 >gi|238784787|ref|ZP_04628789.1| Fumarate reductase iron-sulfur subunit [Yersinia bercovieri ATCC 43970] gi|238714300|gb|EEQ06310.1| Fumarate reductase iron-sulfur subunit [Yersinia bercovieri ATCC 43970] Length = 241 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KVLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK- 144 GSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERKPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|194434736|ref|ZP_03066988.1| fumarate reductase, iron-sulfur protein [Shigella dysenteriae 1012] gi|194417017|gb|EDX33134.1| fumarate reductase, iron-sulfur protein [Shigella dysenteriae 1012] gi|332083802|gb|EGI89020.1| fumarate reductase iron-sulfur subunit [Shigella dysenteriae 155-74] Length = 244 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQDTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|237729091|ref|ZP_04559572.1| fumarate reductase iron-sulfur subunit [Citrobacter sp. 30_2] gi|226908820|gb|EEH94738.1| fumarate reductase iron-sulfur subunit [Citrobacter sp. 30_2] Length = 244 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DL+VDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALGNFPIERDLIVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|238764672|ref|ZP_04625616.1| Fumarate reductase iron-sulfur subunit [Yersinia kristensenii ATCC 33638] gi|238697068|gb|EEP89841.1| Fumarate reductase iron-sulfur subunit [Yersinia kristensenii ATCC 33638] Length = 236 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 2 EVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 60 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK-TVSPK 149 ++ LAC +++ G + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 MVNKVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIGNERKP 120 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 121 QDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRDH 179 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 GKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 221 >gi|115515626|gb|ABJ03701.1| iron-sulfur protein subunit of fumarate reductase [Escherichia coli APEC O1] Length = 241 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR ICGSC Sbjct: 5 KIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK-TVS 147 GM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 64 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNAR 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +Q+ K C+ C C +CP + N ++GPA + A+R+ DSR Sbjct: 124 TADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSR 182 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 183 DHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|22124530|ref|NP_667953.1| fumarate reductase iron-sulfur subunit [Yersinia pestis KIM 10] gi|45440368|ref|NP_991907.1| fumarate reductase iron-sulfur subunit [Yersinia pestis biovar Microtus str. 91001] gi|51594764|ref|YP_068955.1| fumarate reductase iron-sulfur subunit [Yersinia pseudotuberculosis IP 32953] gi|108809914|ref|YP_653830.1| fumarate reductase iron-sulfur subunit [Yersinia pestis Antiqua] gi|108813472|ref|YP_649239.1| fumarate reductase iron-sulfur subunit [Yersinia pestis Nepal516] gi|145600862|ref|YP_001164938.1| fumarate reductase iron-sulfur subunit [Yersinia pestis Pestoides F] gi|150260597|ref|ZP_01917325.1| fumarate reductase iron-sulfur protein [Yersinia pestis CA88-4125] gi|153949678|ref|YP_001402622.1| fumarate reductase iron-sulfur subunit [Yersinia pseudotuberculosis IP 31758] gi|162418485|ref|YP_001605293.1| fumarate reductase iron-sulfur subunit [Yersinia pestis Angola] gi|165926683|ref|ZP_02222515.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936373|ref|ZP_02224941.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011885|ref|ZP_02232783.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214020|ref|ZP_02240055.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400590|ref|ZP_02306099.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418723|ref|ZP_02310476.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423389|ref|ZP_02315142.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469172|ref|ZP_02333876.1| fumarate reductase, iron-sulfur protein [Yersinia pestis FV-1] gi|170026028|ref|YP_001722533.1| fumarate reductase iron-sulfur subunit [Yersinia pseudotuberculosis YPIII] gi|186893771|ref|YP_001870883.1| fumarate reductase iron-sulfur subunit [Yersinia pseudotuberculosis PB1/+] gi|218927562|ref|YP_002345437.1| fumarate reductase iron-sulfur subunit [Yersinia pestis CO92] gi|229836618|ref|ZP_04456784.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis Pestoides A] gi|229840230|ref|ZP_04460389.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842308|ref|ZP_04462463.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229903953|ref|ZP_04519066.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis Nepal516] gi|270489058|ref|ZP_06206132.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pestis KIM D27] gi|294502469|ref|YP_003566531.1| succinate dehydrogenase [Yersinia pestis Z176003] gi|21957326|gb|AAM84204.1|AE013663_10 fumarate reductase, anaerobic, iron-sulfur protein subunit [Yersinia pestis KIM 10] gi|45435224|gb|AAS60784.1| fumarate reductase iron-sulfur protein [Yersinia pestis biovar Microtus str. 91001] gi|51588046|emb|CAH19652.1| fumarate reductase iron-sulfur protein [Yersinia pseudotuberculosis IP 32953] gi|108777120|gb|ABG19639.1| succinate dehydrogenase subunit B [Yersinia pestis Nepal516] gi|108781827|gb|ABG15885.1| succinate dehydrogenase subunit B [Yersinia pestis Antiqua] gi|115346173|emb|CAL19041.1| fumarate reductase iron-sulfur protein [Yersinia pestis CO92] gi|145212558|gb|ABP41965.1| succinate dehydrogenase subunit B [Yersinia pestis Pestoides F] gi|149290005|gb|EDM40082.1| fumarate reductase iron-sulfur protein [Yersinia pestis CA88-4125] gi|152961173|gb|ABS48634.1| fumarate reductase, iron-sulfur protein [Yersinia pseudotuberculosis IP 31758] gi|162351300|gb|ABX85248.1| fumarate reductase, iron-sulfur protein [Yersinia pestis Angola] gi|165915489|gb|EDR34098.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921306|gb|EDR38530.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989244|gb|EDR41545.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204815|gb|EDR49295.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962717|gb|EDR58738.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049958|gb|EDR61366.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057559|gb|EDR67305.1| fumarate reductase, iron-sulfur protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752562|gb|ACA70080.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pseudotuberculosis YPIII] gi|186696797|gb|ACC87426.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pseudotuberculosis PB1/+] gi|229679723|gb|EEO75826.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis Nepal516] gi|229690618|gb|EEO82672.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229696596|gb|EEO86643.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706302|gb|EEO92310.1| fumarate reductase (anaerobic), Fe-S subunit [Yersinia pestis Pestoides A] gi|262360499|gb|ACY57220.1| succinate dehydrogenase [Yersinia pestis D106004] gi|262364446|gb|ACY61003.1| succinate dehydrogenase [Yersinia pestis D182038] gi|270337562|gb|EFA48339.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Yersinia pestis KIM D27] gi|294352928|gb|ADE63269.1| succinate dehydrogenase [Yersinia pestis Z176003] gi|320013776|gb|ADV97347.1| electron transport complex protein RnfC [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 244 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP+ P +T+ V D +LD L YIK+ + P L+ R SCR IC Sbjct: 5 KVLKMEVMRYNPERDSEPHFETFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 63 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P++ Sbjct: 64 GSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 123 Query: 146 VSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 124 NERLPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 182 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 183 DNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|91213705|ref|YP_543691.1| fumarate reductase iron-sulfur subunit [Escherichia coli UTI89] gi|218561315|ref|YP_002394228.1| fumarate reductase iron-sulfur subunit [Escherichia coli S88] gi|229775947|ref|YP_859825.2| fumarate reductase iron-sulfur subunit [Escherichia coli APEC O1] gi|237703822|ref|ZP_04534303.1| fumarate reductase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|331660733|ref|ZP_08361665.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA206] gi|91075279|gb|ABE10160.1| iron-sulfur protein subunit of fumarate reductase [Escherichia coli UTI89] gi|218368084|emb|CAR05891.1| fumarate reductase (anaerobic), Fe-S subunit [Escherichia coli S88] gi|222035928|emb|CAP78673.1| Fumarate reductase iron-sulfur subunit [Escherichia coli LF82] gi|226901734|gb|EEH87993.1| fumarate reductase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|294492294|gb|ADE91050.1| fumarate reductase, iron-sulfur protein [Escherichia coli IHE3034] gi|307629227|gb|ADN73531.1| fumarate reductase iron-sulfur subunit [Escherichia coli UM146] gi|312948807|gb|ADR29634.1| fumarate reductase iron-sulfur subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315288502|gb|EFU47900.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 110-3] gi|315297598|gb|EFU56875.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli MS 16-3] gi|323950775|gb|EGB46653.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H252] gi|323955586|gb|EGB51349.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli H263] gi|331051775|gb|EGI23814.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA206] Length = 244 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LK-TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNARTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|1074114|pir||G64097 fumarate reductase (EC 1.3.99.1) iron-sulfur protein - Haemophilus influenzae (strain Rd KW20) Length = 276 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 26 VMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 84 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 85 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 144 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 145 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 203 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 204 AITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 260 >gi|238918353|ref|YP_002931867.1| fumarate reductase iron-sulfur subunit [Edwardsiella ictaluri 93-146] gi|238867921|gb|ACR67632.1| fumarate reductase iron-sulfur subunit [Edwardsiella ictaluri 93-146] Length = 244 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P TY V D+ +LD LLY+K+ + P L+ R SCR Sbjct: 2 AEMKNLKMEVMRYNPEQDAEPRFVTYEVPYDDA-TSLLDALLYVKDNLAPDLSFRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM +D LAC ++D + V L + V +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVDNVPKLACKTFLRDYPNGMRVEALANFPVERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ + +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 VIGNDRKPEEGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|331650282|ref|ZP_08351354.1| fumarate reductase iron-sulfur subunit [Escherichia coli M605] gi|331040676|gb|EGI12834.1| fumarate reductase iron-sulfur subunit [Escherichia coli M605] Length = 266 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 24 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 82 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 83 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 142 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 143 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 201 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 202 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 251 >gi|167553568|ref|ZP_02347317.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322006|gb|EDZ09845.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 244 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTPDQGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|16272775|ref|NP_438994.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae Rd KW20] gi|68249429|ref|YP_248541.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 86-028NP] gi|145630583|ref|ZP_01786363.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae R3021] gi|145636605|ref|ZP_01792272.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittHH] gi|145638364|ref|ZP_01793974.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittII] gi|145640941|ref|ZP_01796523.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae R3021] gi|148826521|ref|YP_001291274.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittEE] gi|229845885|ref|ZP_04465997.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 7P49H1] gi|260579926|ref|ZP_05847756.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae RdAW] gi|260581651|ref|ZP_05849448.1| succinate dehydrogenase/fumarate reductase [Haemophilus influenzae NT127] gi|329122841|ref|ZP_08251413.1| fumarate reductase subunit B [Haemophilus aegyptius ATCC 11116] gi|1169738|sp|P44893|FRDB_HAEIN RecName: Full=Fumarate reductase iron-sulfur subunit gi|1573848|gb|AAC22492.1| fumarate reductase, iron-sulfur protein (frdB) [Haemophilus influenzae Rd KW20] gi|68057628|gb|AAX87881.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae 86-028NP] gi|144983973|gb|EDJ91415.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae R3021] gi|145270131|gb|EDK10067.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittHH] gi|145272693|gb|EDK12600.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittII] gi|145274455|gb|EDK14319.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 22.4-21] gi|148716681|gb|ABQ98891.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittEE] gi|229810889|gb|EEP46606.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 7P49H1] gi|260093210|gb|EEW77143.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae RdAW] gi|260095244|gb|EEW79135.1| succinate dehydrogenase/fumarate reductase [Haemophilus influenzae NT127] gi|301169553|emb|CBW29154.1| fumarate reductase (anaerobic), Fe-S subunit [Haemophilus influenzae 10810] gi|309751504|gb|ADO81488.1| Fumarate reductase, subunit B [Haemophilus influenzae R2866] gi|327472105|gb|EGF17543.1| fumarate reductase subunit B [Haemophilus aegyptius ATCC 11116] Length = 256 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 184 AITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 240 >gi|320176650|gb|EFW51691.1| Succinate dehydrogenase iron-sulfur protein [Shigella dysenteriae CDC 74-1112] Length = 244 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIEHDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|78044506|ref|YP_360202.1| succinate dehydrogenase iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996621|gb|ABB15520.1| fumarate reductase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 263 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 7/230 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++I+R++P P Y D+ G VLD L YIK ID TL R SCR GICGS Sbjct: 3 VRFKIWRYDPAKDVQPYFQDYTFDVK-EGMTVLDCLYYIKENIDATLAFRASCRMGICGS 61 Query: 88 CGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C M I+ LAC I + PLP+ IKDLV D++ + +H++++P++ Sbjct: 62 CAMYINKKPRLACETQALSLGTDVIEIAPLPNYKNIKDLVPDLTPLFEKHKNVKPYVIPE 121 Query: 147 SPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + Q+ + ++ C+ C C +CP+ D + GP L QAYR+ Sbjct: 122 NEQEFINPTGEYSQTPAELEEYLQFAYCIKCGACLAACPTVGTTPD-FPGPQALAQAYRY 180 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D+RD + ER +++P L+RCH C ++CPKG++PA AI K Sbjct: 181 NADNRDFGEKERKVQVDNPKGLWRCHMAGACAEACPKGVDPALAIQLFKR 230 >gi|323935470|gb|EGB31808.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli E1520] Length = 244 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDYGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|237809231|ref|YP_002893671.1| fumarate reductase iron-sulfur subunit [Tolumonas auensis DSM 9187] gi|237501492|gb|ACQ94085.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Tolumonas auensis DSM 9187] Length = 246 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 6/227 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + E + R+ P+ P Y V +L+ L +IK+ ID TL+ R SCR IC Sbjct: 3 EIMEIEVLRYRPEEDNEPWTQRYQVPFT-HEMSILEALTHIKDHIDSTLSYRWSCRMAIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 GSCGM ++G L C ++D I + PL + + +DLVVDMS F + I+P++ Sbjct: 62 GSCGMMVNGKPKLGCKTFLRDYISEGKIRLEPLANFPIERDLVVDMSDFMQKLEKIKPYI 121 Query: 144 KTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K + LQ+ + + +C+ C C +CP Y +LGPA + YR Sbjct: 122 IPKEEKNLCDGEYLQTPKQLAQYKQFSQCINCGLCYAACPQYALKP-EFLGPAAIALLYR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 + DSRD + ER+ + ++ C + C++ CPKG++PA AI Sbjct: 181 YNEDSRDGAKEERMKLIHQESGVWSCTFVGFCSEVCPKGVDPAAAIQ 227 >gi|319775234|ref|YP_004137722.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae F3047] gi|319897672|ref|YP_004135869.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae F3031] gi|317433178|emb|CBY81552.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae F3031] gi|317449825|emb|CBY86033.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae F3047] Length = 256 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P ++TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNVEVLRYNPEIDQEPHLNTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 184 AITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 240 >gi|145632193|ref|ZP_01787928.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 3655] gi|145634754|ref|ZP_01790462.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittAA] gi|229844702|ref|ZP_04464841.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 6P18H1] gi|144987100|gb|EDJ93630.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 3655] gi|145267920|gb|EDK07916.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittAA] gi|229812416|gb|EEP48106.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 6P18H1] Length = 256 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 184 AITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 240 >gi|300721665|ref|YP_003710940.1| fumarate reductase, anaerobic, Fe-S subunit [Xenorhabdus nematophila ATCC 19061] gi|297628157|emb|CBJ88708.1| fumarate reductase, anaerobic, Fe-S subunit [Xenorhabdus nematophila ATCC 19061] Length = 244 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 3/229 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR ICGSC Sbjct: 8 TMEVMRYNPETDSKPHFVTYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 GM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 67 GMMVNRVPKLACKIFLRDYAQGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIGNDR 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +Q+ K C+ C C +CP + N ++GPA + A+R+ +D+R Sbjct: 127 KPADGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAVTLAHRYNLDNR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER+ ++ ++ C + C++ CPK ++PA AI + K Sbjct: 186 DNGKKERMPHINSDNGVWSCTFVGYCSEVCPKHVDPAGAIQQSKAESAK 234 >gi|170290784|ref|YP_001737600.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170174864|gb|ACB07917.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 270 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 8/239 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + R+Y++NP P Y +++ G +LD LL IK +IDP+L R SC + +CG Sbjct: 13 TVKIRVYKYNPKKDFAPGWKEYEIEVSR-GTTILDALLRIKEEIDPSLAFRYSCGQALCG 71 Query: 87 SCGMNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 SC M ++G L C G + + PL + +I+DL D F+ +HR+++PW+ Sbjct: 72 SCAMMVNGRQMLICRTRVLEVVKDGKVELRPLDNFPIIRDLACDFKSFFDKHRAVKPWII 131 Query: 145 TVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P + Q+ E+ + +C+ C C ++CP+ YLGP L QAY Sbjct: 132 RRDVEELENPTGDYKQTIEEYARYYQFTDCLKCGACYSACPTVAT-DHEYLGPQALAQAY 190 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+++D+RDE ER+ ++ +RCH +C+ CPK ++PA+ I +K +++ K+ Sbjct: 191 RYIVDTRDEGLEERIAVVDSDHGCWRCHFATSCSDVCPKYVDPAQGIQLLKKLIMRSKL 249 >gi|331671307|ref|ZP_08372105.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA280] gi|331071152|gb|EGI42509.1| fumarate reductase iron-sulfur subunit [Escherichia coli TA280] Length = 263 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 21 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 79 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 80 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 139 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 140 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 198 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 199 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 248 >gi|238750056|ref|ZP_04611559.1| Fumarate reductase iron-sulfur subunit [Yersinia rohdei ATCC 43380] gi|238711600|gb|EEQ03815.1| Fumarate reductase iron-sulfur subunit [Yersinia rohdei ATCC 43380] Length = 241 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 3/227 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + + R+NP++ P + + V D +LD L YIK+ + P L+ R SCR IC Sbjct: 2 KVLKMEVMRYNPESDSEPHFEMFEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAIC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSCGM ++ LAC +++ + V L + + +DLVVDM+HF +I+P++ Sbjct: 61 GSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIG 120 Query: 146 VSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K Q+ K C+ C C +CP + N ++GPA + A+R+ + Sbjct: 121 NERKAKDGPTKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 DTRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 226 >gi|296100926|ref|YP_003611072.1| fumarate reductase iron-sulfur subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055385|gb|ADF60123.1| fumarate reductase iron-sulfur subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 244 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMQTLKVEVVRYNPEVDTAPHSAFYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D I V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNKVPKLACKTFLRDYTKGIKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMPQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|331644903|ref|ZP_08346020.1| fumarate reductase iron-sulfur subunit [Escherichia coli H736] gi|331655986|ref|ZP_08356974.1| fumarate reductase iron-sulfur subunit [Escherichia coli M718] gi|331680288|ref|ZP_08380947.1| fumarate reductase iron-sulfur subunit [Escherichia coli H591] gi|331035878|gb|EGI08116.1| fumarate reductase iron-sulfur subunit [Escherichia coli H736] gi|331046340|gb|EGI18430.1| fumarate reductase iron-sulfur subunit [Escherichia coli M718] gi|331071751|gb|EGI43087.1| fumarate reductase iron-sulfur subunit [Escherichia coli H591] Length = 263 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 21 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 79 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 80 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 139 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 140 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 198 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 199 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 248 >gi|253690120|ref|YP_003019310.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756698|gb|ACT14774.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 245 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 5/231 (2%) Query: 24 EKNLKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +K + + R+NP+ P + + V + +LD L YIK+ + P L+ R SCR Sbjct: 2 AETIKTLKMEVMRYNPEQDREPYFEAFDVPYN-TQTSLLDALGYIKDNLAPDLSYRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P Sbjct: 61 MAICGSCGMMVNNVPKLACKTFLRDYTNGLKVEALGNFPIERDLVVDMTHFIESLEAIKP 120 Query: 142 WLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ Q+ K C+ C C +CP + N ++GPA + A+ Sbjct: 121 YIIGNDRKPADGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAH 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 RYNLDNRDHGKKERMPQLNGNNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 230 >gi|161527769|ref|YP_001581595.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosopumilus maritimus SCM1] gi|160339070|gb|ABX12157.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitrosopumilus maritimus SCM1] Length = 249 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 6/240 (2%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 A RI R+NP+ + V + VL+ +L +K D ++ +R S Sbjct: 8 ADDQSSQSITLRIARYNPEKDSERQFMEFTVPYEK-WTTVLEAILDVKKHFDHSVAVRYS 66 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CR+ CGSCGM I+G LAC + ++ I V P+ + +I+DL V + H Sbjct: 67 CRQATCGSCGMIINGKPRLACFTKISELDSNIVTVEPMNNFPIIRDLAVKFERLFDTHHK 126 Query: 139 IEPWLKTVSPK---PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 I+P+L + AKE LQS E+ ++ C+ C C+++CP+ ++GP Sbjct: 127 IKPYLDRDDTELESDAKEFLQSPEELEQYIQFANCIKCGLCNSACPTMAT-DSSFVGPQA 185 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L QAYR++ DSRD+ + RL +++ ++RCH +C+Q CPKG++PA I ++ +L Sbjct: 186 LAQAYRYVADSRDKGKDSRLKIIDESHGIWRCHFAGSCSQVCPKGVDPAMGIQLLRGYML 245 >gi|16763164|ref|NP_458781.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144643|ref|NP_807985.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213418994|ref|ZP_03352060.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428690|ref|ZP_03361440.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213621849|ref|ZP_03374632.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646923|ref|ZP_03376976.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852161|ref|ZP_03381693.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289806946|ref|ZP_06537575.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289829996|ref|ZP_06547447.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25284639|pir||AI1046 succinate dehydrogenase (EC 1.3.99.1) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505472|emb|CAD06822.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140282|gb|AAO71845.1| fumarate reductase, iron-sulfur protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 244 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLV+DM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVIDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTPDQGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|58269760|ref|XP_572036.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus neoformans var. neoformans JEC21] gi|57228272|gb|AAW44729.1| succinate dehydrogenase iron-sulfur subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 289 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 14/208 (6%) Query: 2 VEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVL 60 ++ P GK + +KE++IYRWNPD P + TY +DL CGPM+L Sbjct: 34 AQLATP-----VEGK-------QPPIKEFKIYRWNPDVPNEKPKLQTYKIDLSQCGPMML 81 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHM 119 D L+ IKN++DPTLT RRSCREGICGSC MNIDG NTLAC + KD +YPLPHM Sbjct: 82 DALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPKDTSKDSKIYPLPHM 141 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V+KDLV D++HFY Q+++IEP+LK +P E LQS DR+K+DG+YEC++CACCS S Sbjct: 142 YVVKDLVPDLTHFYKQYKAIEPYLKNDNPPEKGEFLQSQADRKKLDGMYECILCACCSAS 201 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSR 207 CPSYWWN D YLGPA+L+QAYRW+ DSR Sbjct: 202 CPSYWWNQDEYLGPAVLMQAYRWMADSR 229 >gi|324526942|gb|ADY48734.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 216 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 127/202 (62%), Positives = 162/202 (80%), Gaps = 3/202 (1%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPL 116 MVLD L+ IKN IDPTLT RRSCREGICGSC MNI G NTLAC+ ++++ KG + +YPL Sbjct: 1 MVLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCA 174 PHM VI+DLVVDM+ FY+Q+ I+PWL+ K+ QS ++++KIDGLYEC++CA Sbjct: 61 PHMFVIRDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CCSTSCPSYWWN+D+YLGPA+L+QAYRW+IDSRD+ ERL ++D F ++CHTIMNCT Sbjct: 121 CCSTSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCT 180 Query: 235 QSCPKGLNPAKAIAKIKMMLLD 256 ++CPK LNPAKAI +IKM+L Sbjct: 181 KTCPKHLNPAKAIGEIKMLLTK 202 >gi|320450840|ref|YP_004202936.1| succinate dehydrogenase, iron-sulfur subunit [Thermus scotoductus SA-01] gi|320151009|gb|ADW22387.1| succinate dehydrogenase, iron-sulfur subunit [Thermus scotoductus SA-01] Length = 231 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 136/232 (58%), Gaps = 5/232 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E RI R P P + ++ + VLD LL +K ++D TL R SC G+CGS Sbjct: 3 VELRILRRAPGRG--PYWQAFSLETEGRE-RVLDLLLRVKAEVDGTLAFRYSCGHGVCGS 59 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G N LAC +KD+ + V PL + KDL+VD+ F++ +R++ P+L Sbjct: 60 DAMTINGRNRLACKTLVKDLGRILTVEPLRALPARKDLIVDLEPFFAAYRAVRPYLINDE 119 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P P +E LQS E+R + + +C++CA C++SCP YW N Y+GPA ++QA+R+L DSR Sbjct: 120 PPPERERLQSPEERARYEEGTQCILCAACTSSCPVYWVNG-HYIGPAAIVQAHRFLFDSR 178 Query: 208 DEFQGERLDN-LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ERL + L ++RC NCT++CP+G++ + I ++K +L+ Sbjct: 179 DRGAEERLSSWLGGRNGVWRCRNAHNCTEACPRGIDVNRLITEVKRRILEEA 230 >gi|149909945|ref|ZP_01898594.1| succinate dehydrogenase [Moritella sp. PE36] gi|149806959|gb|EDM66918.1| succinate dehydrogenase [Moritella sp. PE36] Length = 250 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 10/232 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+ P+ P T+ V +L+ L YIK+ +D T++ R SCR ICGS Sbjct: 6 IKIDILRYRPEMDDKPFTQTFEVPYKA-DMSILEALQYIKDNLDATISFRWSCRMAICGS 64 Query: 88 CGMNIDGTNTLACVKDMK-DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CG+ +DG L C ++ I++ PL + + +DLVV M F + I+P++ Sbjct: 65 CGLMVDGVPKLGCKAFLRDYFPNKISLEPLANFPIERDLVVVMDDFIKKLEEIKPYIIPE 124 Query: 147 SPKPAKE-------LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + Q+ E +K C+ C C ++CP Y +++GPA L Sbjct: 125 KTGTQDKKCLSEGTYKQTPEQMEKYKKFSMCINCGLCYSACPQYAL-DTKFIGPAALALL 183 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ DSRD ER+ + ++ C + C+ CPKG++PA AI +K Sbjct: 184 ARYNRDSRDAGTAERMKIVNQEEGVWGCTFVGYCSVVCPKGVDPAAAIQLLK 235 >gi|157147873|ref|YP_001455192.1| fumarate reductase iron-sulfur subunit [Citrobacter koseri ATCC BAA-895] gi|157085078|gb|ABV14756.1| hypothetical protein CKO_03679 [Citrobacter koseri ATCC BAA-895] Length = 244 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 SEMKNLKIEVVRYNPETDTAPHSAFYEVPYDEA-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTKGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNGQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|309973674|gb|ADO96875.1| Fumarate reductase, subunit B [Haemophilus influenzae R2846] Length = 256 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNIEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 184 AITMAHRYNLDNRDHGKAKRMPLLNSKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 240 >gi|295098315|emb|CBK87405.1| succinate dehydrogenase subunit B [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 244 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR ICGSC Sbjct: 8 KIEVVRYNPEVDAAPHSAFYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 GM ++ LAC ++D I V L + + +DLVVDM+HF +I+P++ Sbjct: 67 GMMVNKVPKLACKTFLRDYTKGIKVEALGNFPIERDLVVDMTHFIESLEAIKPYIIGNPR 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 Q+ K C+ C C +CP + N ++GPA + A+R+ DSR Sbjct: 127 TPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 186 DHGKKERMAQLNSQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|317493556|ref|ZP_07951977.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918499|gb|EFV39837.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 244 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + + R+NP+ P TY V D +LD L YIK+ + L+ R SCR Sbjct: 2 AEMKILKMEVMRYNPEQDAEPHFVTYDVPYDET-TSLLDALGYIKDNLAADLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM +D LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVDRVPKLACKTFLRDYPTGMRVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + LQ+ +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNNRKPEDGTNLQTPAQMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD Q ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDTRDHGQKERMPVLNSDNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|290473606|ref|YP_003466476.1| fumarate reductase, anaerobic, Fe-S subunit [Xenorhabdus bovienii SS-2004] gi|289172909|emb|CBJ79680.1| fumarate reductase, anaerobic, Fe-S subunit [Xenorhabdus bovienii SS-2004] Length = 244 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 3/235 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P TY V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKMEVMRYNPEIDSEPHFVTYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + + L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNRVPKLACKIFLRDYPQGMKIEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNDRKPADGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAVTLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +D+RD + ER+ + ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKKERMPQINSDNGVWSCTFVGYCSEVCPKHVDPAGAIQQSKAESAK 234 >gi|89573803|gb|ABD77127.1| succinate dehydrogenase complex subunit B [Didelphis virginiana] Length = 195 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 120/195 (61%), Positives = 151/195 (77%), Gaps = 4/195 (2%) Query: 33 YRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 YRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREGICGSC MN Sbjct: 1 YRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDATLTFRRSCREGICGSCAMN 60 Query: 92 IDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-- 148 I+G NTLAC + + + +YPLPHM V+KDLV D+++FY+Q++SI+P+LK Sbjct: 61 INGGNTLACTRRIDTNLNKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKKKDESQ 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD Sbjct: 121 EGKAQYLQSMEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRD 180 Query: 209 EFQGERLDNLEDPFR 223 +F ERL L+DPF Sbjct: 181 DFTEERLAQLQDPFS 195 >gi|152973027|ref|YP_001338173.1| fumarate reductase iron-sulfur subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579545|ref|YP_002240888.1| fumarate reductase, iron-sulfur protein [Klebsiella pneumoniae 342] gi|238892640|ref|YP_002917374.1| fumarate reductase iron-sulfur subunit [Klebsiella pneumoniae NTUH-K2044] gi|288937544|ref|YP_003441603.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Klebsiella variicola At-22] gi|290512283|ref|ZP_06551650.1| fumarate reductase iron-sulfur subunit [Klebsiella sp. 1_1_55] gi|330003258|ref|ZP_08304569.1| fumarate reductase iron-sulfur subunit [Klebsiella sp. MS 92-3] gi|150957876|gb|ABR79906.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568603|gb|ACI10379.1| fumarate reductase, iron-sulfur protein [Klebsiella pneumoniae 342] gi|238544956|dbj|BAH61307.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288892253|gb|ADC60571.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Klebsiella variicola At-22] gi|289775278|gb|EFD83279.1| fumarate reductase iron-sulfur subunit [Klebsiella sp. 1_1_55] gi|328537028|gb|EGF63314.1| fumarate reductase iron-sulfur subunit [Klebsiella sp. MS 92-3] Length = 244 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPEVDTAPHSAFYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D I V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNKVPKLACKTFLRDYTKGIKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNNRTPDQGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNGQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|113461421|ref|YP_719490.1| fumarate reductase iron-sulfur subunit [Haemophilus somnus 129PT] gi|170718953|ref|YP_001784119.1| fumarate reductase iron-sulfur subunit [Haemophilus somnus 2336] gi|112823464|gb|ABI25553.1| succinate dehydrogenase subunit B [Haemophilus somnus 129PT] gi|168827082|gb|ACA32453.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haemophilus somnus 2336] Length = 256 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V D +LD L YIK+K++P L+ R SCR ICG Sbjct: 6 IMNIEVLRYNPEADKEPYLRTYQVPYD-SQTSLLDALGYIKDKLEPELSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++G LAC ++D G + + PL + + +DLVVD+SHF SI+P++ Sbjct: 65 SCGMMVNGKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLESIKPYIIGN 124 Query: 147 SPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + +K C+ C C +CP + N ++GPA Sbjct: 125 KAPELDGKPHTSAELAESRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFVGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +L A+R+ +D+RD + ER+ + ++ C + C++ CPK ++PA + + K Sbjct: 184 VLTLAHRYNLDNRDHGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVDPASGVNQGK 240 >gi|12720423|gb|AAK02284.1| FrdB [Pasteurella multocida subsp. multocida str. Pm70] Length = 276 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 17/263 (6%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 MV+ PK + ++ + + + R+NP+ P + TY V DN +L Sbjct: 3 MVQK--PKHKKRQKPIRRTQMVNQAIM-NIEVLRYNPEQDKEPYLRTYQVPYDN-QTSLL 58 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L YIK+K++P L+ R SCR ICGSCGM ++ LAC ++D G + + PL + Sbjct: 59 DALGYIKDKLEPELSYRWSCRMAICGSCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFP 118 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS------------HEDRQKIDGLY 168 + +DLVVD+SHF +I+P++ +K Sbjct: 119 IERDLVVDLSHFIESLEAIKPYIIGNQAPALDGKPHPSSELAKSRTKQTPAQLEKYRTFS 178 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP + N ++GPA L A+R+ +D+RD + ER+ + ++ C Sbjct: 179 MCINCGLCYAACPQFGLNP-EFVGPAALTLAHRYNLDNRDHGKEERMKIINGKNGVWSCT 237 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 + C++ CPK ++PA A+ + K Sbjct: 238 FVGYCSEVCPKHVDPASAVNQGK 260 >gi|229282647|ref|NP_245137.2| fumarate reductase iron-sulfur subunit [Pasteurella multocida subsp. multocida str. Pm70] Length = 256 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P L+ R SCR ICG Sbjct: 6 IMNIEVLRYNPEQDKEPYLRTYQVPYDN-QTSLLDALGYIKDKLEPELSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQS------------HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +K C+ C C +CP + N ++GPA Sbjct: 125 QAPALDGKPHPSSELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP-EFVGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L A+R+ +D+RD + ER+ + ++ C + C++ CPK ++PA A+ + K Sbjct: 184 ALTLAHRYNLDNRDHGKEERMKIINGKNGVWSCTFVGYCSEVCPKHVDPASAVNQGK 240 >gi|219870284|ref|YP_002474659.1| fumarate reductase iron-sulfur subunit [Haemophilus parasuis SH0165] gi|219690488|gb|ACL31711.1| fumarate reductase (anaerobic), Fe-S subunit [Haemophilus parasuis SH0165] Length = 256 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 14/235 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P + Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TVEVLRYNPEQDNEPYLSKYEVPYD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF SI+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLESIKPYIIDNKA 126 Query: 149 KPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + +K C+ C C +CP + N ++GPA L Sbjct: 127 PELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP-EFVGPAAL 185 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ + K Sbjct: 186 TLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAVNQGK 240 >gi|260914414|ref|ZP_05920883.1| fumarate reductase [Pasteurella dagmatis ATCC 43325] gi|260631515|gb|EEX49697.1| fumarate reductase [Pasteurella dagmatis ATCC 43325] Length = 256 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P L+ R SCR ICG Sbjct: 6 IMNIEVLRYNPEQDKEPYLRTYQVPYDN-QTSLLDALGYIKDKLEPELSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQS------------HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +K C+ C C +CP + N ++GPA Sbjct: 125 QAPALDGKPHPSSELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP-EFVGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L A+R+ +D+RD + ER+ + ++ C + C++ CPK ++PA A+ + K Sbjct: 184 ALTLAHRYNLDNRDHGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVDPASAVNQGK 240 >gi|322831141|ref|YP_004211168.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rahnella sp. Y9602] gi|321166342|gb|ADW72041.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rahnella sp. Y9602] Length = 244 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + + I R+NP+ P Y V D +LD L YIK+ + L+ R SCR Sbjct: 2 AKMRSLKVEIMRYNPETDSAPHPVVYDVPFDET-TSLLDALGYIKDHLAADLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC +++ + + L + V +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNRVPKLACKTFLREYPDGMQIEALGNFPVERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + Q+ +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNTRTVGEGPGKQTPAQMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDNRDHGKAQRMPQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|333011139|gb|EGK30553.1| fumarate reductase iron-sulfur subunit [Shigella flexneri K-272] gi|333012667|gb|EGK32047.1| fumarate reductase iron-sulfur subunit [Shigella flexneri K-227] Length = 244 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKGRMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|311281289|ref|YP_003943520.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacter cloacae SCF1] gi|308750484|gb|ADO50236.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Enterobacter cloacae SCF1] Length = 244 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E N + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMNNLKIEVVRYNPEVDTTPHSAFYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D I V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTKGIRVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ +K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMEKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMPQLNGKNGVWSCTFVGFCSEVCPKHVDPAAAIQQGK 229 >gi|262045414|ref|ZP_06018437.1| fumarate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037243|gb|EEW38491.1| fumarate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 244 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR ICGSC Sbjct: 8 KVEVVRYNPEVDTAPHSAFYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 GM ++ LAC ++D I V L + + +DLVVDM+HF +I+P++ + Sbjct: 67 GMMVNKVPKLACKTFLRDYTKGIKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNNR 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 Q+ K C+ C C +CP + N ++GPA + A+R+ DSR Sbjct: 127 TPDQGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 186 DHGKKERMAQLNGQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|167855692|ref|ZP_02478449.1| fumarate reductase iron-sulfur subunit [Haemophilus parasuis 29755] gi|167853210|gb|EDS24467.1| fumarate reductase iron-sulfur subunit [Haemophilus parasuis 29755] Length = 256 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 14/235 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P + Y V D +LD L YIK++++P L+ R SCR ICGSC Sbjct: 8 TVEVLRYNPEQDNEPYLSKYEVPYD-SQTSLLDALGYIKDELEPELSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF SI+P++ Sbjct: 67 GMMVNGKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLESIKPYIIDNKA 126 Query: 149 KPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + +K C+ C C +CP + N ++GPA L Sbjct: 127 PELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP-EFVGPAAL 185 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ + K Sbjct: 186 TLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAVNQGK 240 >gi|260451017|gb|ACX41439.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Escherichia coli DH1] gi|315138710|dbj|BAJ45869.1| fumarate reductase iron-sulfur subunit [Escherichia coli DH1] Length = 244 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKIEVVRYNPKVDTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + S +Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|251793018|ref|YP_003007744.1| fumarate reductase iron-sulfur subunit [Aggregatibacter aphrophilus NJ8700] gi|247534411|gb|ACS97657.1| fumarate reductase iron-sulfur subunit [Aggregatibacter aphrophilus NJ8700] Length = 256 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 14/241 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E+++ I R+NP+ P + TY V D +LD L YIK+K++P L+ R SCR Sbjct: 2 AEQSIMNVEILRYNPEVDKEPHLKTYQVPYD-SQTSLLDALGYIKDKLEPELSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D G + + L + + +DLVVD+SHF +I+P+ Sbjct: 61 AICGSCGMMVNNIPKLACKTFLRDYSGHMRIEALANFPIERDLVVDLSHFIESLEAIKPY 120 Query: 143 LKTVSPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + ++ +K C+ C C +CP + N + Sbjct: 121 VIGNQAPELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EF 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA+L +R+ +D+RD + ER+ + ++ C + C++ CPK + PA AI + Sbjct: 180 VGPAVLTLGHRYNLDNRDHGKAERMKIMNGENGVWSCTFVGACSEVCPKHVGPATAINQG 239 Query: 251 K 251 K Sbjct: 240 K 240 >gi|152979471|ref|YP_001345100.1| fumarate reductase iron-sulfur subunit [Actinobacillus succinogenes 130Z] gi|150841194|gb|ABR75165.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Actinobacillus succinogenes 130Z] Length = 255 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I R+NP+ P + TY V DN +LD L YIK++++P L+ R SCR ICG Sbjct: 5 VMNVEILRYNPETDKEPYLKTYQVPYDN-QTSLLDALGYIKDRLEPELSYRWSCRMAICG 63 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + L + + +DLVVD+SHF +I+P++ Sbjct: 64 SCGMMVNNIPKLACKTFLRDYSGHMRIEALANFPIERDLVVDLSHFIESLEAIKPYIIGN 123 Query: 147 SPKPAKELLQSHEDRQK------------IDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + QK C+ C C +CP + N ++GPA Sbjct: 124 KMPELDGQPHESAELQKSRTKQTPKQLEKYRQFSMCINCGLCYAACPQFGLNP-EFVGPA 182 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L A+R+ +D+RD + ER+ + ++ C + C++ CPK +NPA AI + K Sbjct: 183 ALTMAHRYNLDNRDNGKAERMPIINGDNGVWTCTFVGACSEVCPKHVNPAAAINQGK 239 >gi|323144419|ref|ZP_08079025.1| fumarate reductase iron-sulfur subunit [Succinatimonas hippei YIT 12066] gi|322415813|gb|EFY06541.1| fumarate reductase iron-sulfur subunit [Succinatimonas hippei YIT 12066] Length = 249 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 9/237 (3%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + + + R+ P+ P T+ V VL+ L YIK+ +P+L+ R SCR Sbjct: 2 AEKTMKVTVVRYRPEQDDKPWEQTFEVPYIK-ETSVLEALFYIKDHFEPSLSFRWSCRMA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG---AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 +CGSCGM ++G LAC ++D + I + PL + V +DLVVD+S + I+ Sbjct: 61 VCGSCGMMVNGVPHLACKTFLRDYENSKNGITIAPLDNFPVERDLVVDISDLIEKIERIK 120 Query: 141 PWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P++ + Q+ + + +C+ C CC +CP Y N D ++GPA L Sbjct: 121 PYIIPSAKDKNMPLTKAYRQTPQQMEAYRQFAQCINCGCCYAACPQYKINKD-FIGPAAL 179 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 YR+ ID+RD Q +R+ L ++ C + C++ CPK ++P+ AI K M Sbjct: 180 TLLYRYNIDNRDGGQAQRMPFLNAEEGVWSCTFVGYCSEVCPKHVDPSSAIQLGKKM 236 >gi|261342819|ref|ZP_05970677.1| fumarate reductase, iron-sulfur protein [Enterobacter cancerogenus ATCC 35316] gi|288314861|gb|EFC53799.1| fumarate reductase, iron-sulfur protein [Enterobacter cancerogenus ATCC 35316] Length = 244 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMQKMKVEVVRYNPEVDTAPHSAFYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D I V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNKVPKLACKTFLRDYTKGIKVEALGNFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + DSRD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNEDSRDHGKKERMAQLNSQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|271502188|ref|YP_003335214.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech586] gi|270345743|gb|ACZ78508.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dickeya dadantii Ech586] Length = 245 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 6/229 (2%) Query: 27 LKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K + + R+NP+ P DTY V +LD L YIK+ + P L+ R SCR I Sbjct: 4 MKTLKMEVMRYNPEQDNAPHFDTYDVPYTR-ETSLLDALGYIKDNLAPDLSYRWSCRMAI 62 Query: 85 CGSCGMNIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 63 CGSCGMMVNNVPKLACKTFLRDYASSGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYI 122 Query: 144 KTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + Q+ K C+ C C +CP + N ++GPA + A+R+ Sbjct: 123 IGNNRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRY 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 182 NLDNRDHGKKERMPQLNSDNGVWSCTFVGYCSEVCPKHVDPAAAIQQSK 230 >gi|288931613|ref|YP_003435673.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ferroglobus placidus DSM 10642] gi|288893861|gb|ADC65398.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ferroglobus placidus DSM 10642] Length = 236 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 8/233 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +RI R++ Y V++ G VLD L YI+ +D +L R SCR G+CGSC Sbjct: 3 FRIKRFD---GEKEYWSEYEVEV-RKGMTVLDALFYIRENLDGSLAFRVSCRMGVCGSCA 58 Query: 90 MNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTV 146 M I+ LAC + D+K I + PL + VIKDL+VD F+ +H ++P+ K Sbjct: 59 MKINHKPRLACETQIADLKSDVIVIEPLDNYKVIKDLIVDFDGFFKKHAKVKPYLIRKVE 118 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + EL+Q+ + C+ C C + CP+ D YLGPA AYR++ DS Sbjct: 119 NYEKPVELIQTPKQLDSYYQFALCIKCGACYSVCPASATRKD-YLGPAAFASAYRFIKDS 177 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RDE + ER+ + ++RCH C++ CPK ++PAKA+ K++ + I Sbjct: 178 RDEGKEERIPEVACDGGVWRCHFAAECSEVCPKNVDPAKAVQKLRWEAVKHSI 230 >gi|315633842|ref|ZP_07889131.1| fumarate reductase subunit B [Aggregatibacter segnis ATCC 33393] gi|315477092|gb|EFU67835.1| fumarate reductase subunit B [Aggregatibacter segnis ATCC 33393] Length = 256 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 14/241 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E+++ + R+NP+ P + TY V D +LD L YIK+K++P L+ R SCR Sbjct: 2 AEQSIMNVEVLRYNPEVDKEPHLKTYQVPYD-SQTSLLDALGYIKDKLEPELSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D G + + L + + +DL+VD+SHF +I+P+ Sbjct: 61 AICGSCGMMVNNIPKLACKTFLRDYSGHMRIEALANFPIERDLIVDLSHFIESLEAIKPY 120 Query: 143 LKTVSPKPAKELLQSHEDRQK------------IDGLYECVMCACCSTSCPSYWWNSDRY 190 + ++ + C+ C C +CP + N + Sbjct: 121 VIGNKAPELDGKPHPSKELAQSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EF 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA+L +R+ +D+RD + ER+ + ++ C + C++ CPK + PA AI + Sbjct: 180 VGPAVLTLGHRYNLDNRDHGKAERMKIMNGENGVWSCTFVGACSEVCPKHVGPATAINQG 239 Query: 251 K 251 K Sbjct: 240 K 240 >gi|325302724|tpg|DAA34111.1| TPA_exp: succinate dehydrogenase Ip subunit [Amblyomma variegatum] Length = 235 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 119/201 (59%), Positives = 150/201 (74%), Gaps = 4/201 (1%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 G K +K++ +YRW+P+ P + TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCR Sbjct: 35 GTKGVKKFEVYRWDPEKKGDKPRLQTYEVDLNKCGPMVLDALIKIKNEVDPTLTFRRSCR 94 Query: 82 EGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNI+GTNTLAC K + + +YPLPHM V+KDLV DM+ FY ++S++ Sbjct: 95 EGICGSCAMNINGTNTLACICKIDDNTAKSTKIYPLPHMYVVKDLVPDMTLFYEHYKSVQ 154 Query: 141 PWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PWL+ + + LQS DR+K+DGLYEC++CACCSTSCPSYWWNS+RYL PA L+Q Sbjct: 155 PWLQKKTEVKVGDHQNLQSISDRKKLDGLYECILCACCSTSCPSYWWNSNRYLRPAALMQ 214 Query: 199 AYRWLIDSRDEFQGERLDNLE 219 YRW+IDSRDE ERL LE Sbjct: 215 VYRWVIDSRDENTVERLKRLE 235 >gi|120597035|ref|YP_961609.1| fumarate reductase iron-sulfur subunit [Shewanella sp. W3-18-1] gi|146291460|ref|YP_001181884.1| fumarate reductase iron-sulfur subunit [Shewanella putrefaciens CN-32] gi|120557128|gb|ABM23055.1| succinate dehydrogenase subunit B [Shewanella sp. W3-18-1] gi|145563150|gb|ABP74085.1| succinate dehydrogenase subunit B [Shewanella putrefaciens CN-32] gi|319424626|gb|ADV52700.1| fumarate reductae, FeS subunit, FrdB [Shewanella putrefaciens 200] Length = 246 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 120/229 (52%), Gaps = 3/229 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E N++ I R++P+ P ++T+ V DN + D L YIK+ +D +L+ R SCR Sbjct: 3 EHNIQTVNILRYDPERDNEPFLETFKVPADNT-TSIQDALTYIKDHMDKSLSYRWSCRMA 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSCG+ ++ LAC ++D I + PL + ++ KDLVVD + F + +++P++ Sbjct: 62 ICGSCGVMVNKVPKLACKTFLRDYPEGITLEPLANFAIEKDLVVDKAPFLERLEAMKPYI 121 Query: 144 KTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 Q+ K C+ C C +CP + N ++GPA + A+R+ Sbjct: 122 IGNDRKPEDGPNRQTPAQMAKYKQFAGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRY 180 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +DSRD + ER+ + + C + C++ CPK ++PA A+ + K Sbjct: 181 NLDSRDLGKVERMKLINGKDGAWGCTFVGYCSKVCPKHVDPAAAVNQSK 229 >gi|121637474|ref|YP_977697.1| fumarate reductase frdC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493121|emb|CAL71592.1| Probable fumarate reductase [iron-sulfur subunit] frdB and [membrane anchor subunit] frdC [Mycobacterium bovis BCG str. Pasteur 1173P2] Length = 376 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|300715027|ref|YP_003739830.1| succinate dehydrogenase [Erwinia billingiae Eb661] gi|299060863|emb|CAX57970.1| Succinate dehydrogenase [Erwinia billingiae Eb661] Length = 244 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 118/224 (52%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP++ P + + V D+ +LD L +IK+ + L+ R SCR ICGSC Sbjct: 8 KITVQRYNPESDRVPRHEIFDVPWDD-QTSLLDALGFIKDNLAFDLSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++ + V PL H V +DLVVDMS F +++PW+ + Sbjct: 67 GMMVNGIPKLACKTFLRHYPDGLLVEPLAHFPVERDLVVDMSRFIESLEAVKPWIIGNAR 126 Query: 149 KPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + Q+ K C+ C C +CP + N ++GPA + A+R+ +DSR Sbjct: 127 NADRGPQRQTPTQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 186 DQGKAQRMPTLNGDNGVWPCTFVGFCSEVCPKHVDPAAAIQQSK 229 >gi|261867505|ref|YP_003255427.1| fumarate reductase iron-sulfur subunit [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412837|gb|ACX82208.1| fumarate reductase iron-sulfur subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 256 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 14/241 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E+ + I R+N + P + TY V D +LD L YIK+K++P L+ R SCR Sbjct: 2 AEQPIMNVEILRYNSEVDKEPHLKTYQVPFD-SQTSLLDALGYIKDKLEPELSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P+ Sbjct: 61 AICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPY 120 Query: 143 LKTVSPKPAKELLQSHED------------RQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + ++ +K C+ C C +CP + N + Sbjct: 121 IIGNKMPELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EF 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA L A+R+ +D+RD Q ER+ + ++ C + C++ CPK + PA AI + Sbjct: 180 VGPAALTLAHRYNLDNRDHGQAERMKIMNGENGVWSCTFVGACSEVCPKHVGPATAINQG 239 Query: 251 K 251 K Sbjct: 240 K 240 >gi|21674851|ref|NP_662916.1| succinate/fumarate oxidoreductase, iron-sulfur protein, putative [Chlorobium tepidum TLS] gi|21648073|gb|AAM73258.1| succinate/fumarate oxidoreductase, iron-sulfur protein, putative [Chlorobium tepidum TLS] Length = 345 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 11/244 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E +R++R+NP P D Y + L+ G VL L YIK +D TLT R C+ G Sbjct: 11 ESRDVTFRVHRFNPQVDSKPYFDDYTIKLEK-GITVLRALNYIKEHVDSTLTFRAFCQAG 69 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQHR 137 ICGSC M I+ + LAC + D I + PL ++ IKDLVV+M + + Sbjct: 70 ICGSCAMRINNMSKLACTTQVWDELEKAREPGVIKIEPLRNLPHIKDLVVEMDPVVGKMK 129 Query: 138 SIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 W+ + P+ E L S E+ Q D +C++CA C + C + Y+ P Sbjct: 130 KYSNWVVSRMPEEQWGKKEFLISEEEFQTYDKATDCILCASCVSECTILRAHK-EYVSPV 188 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +LL++YR DSRD +RL +L ++ C C ++C K + AI ++ Sbjct: 189 VLLRSYRMNADSRDGIHDQRLADLVQDHGVWDCTHCYRCQETCVKNIPIMDAIHGLREDA 248 Query: 255 LDRK 258 ++R+ Sbjct: 249 IERR 252 >gi|308377764|ref|ZP_07480325.2| putative 4Fe-4S binding domain protein [Mycobacterium tuberculosis SUMu009] gi|308354721|gb|EFP43572.1| putative 4Fe-4S binding domain protein [Mycobacterium tuberculosis SUMu009] Length = 497 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|31792738|ref|NP_855231.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium bovis AF2122/97] gi|31618328|emb|CAD96246.1| PROBABLE FUMARATE REDUCTASE [IRON-SULFUR SUBUNIT] FRDB and [MEMBRANE ANCHOR SUBUNIT] FRDC (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium bovis AF2122/97] Length = 374 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|253991223|ref|YP_003042579.1| fumarate reductase iron-sulfur subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782673|emb|CAQ85837.1| fumarate reductase iron-sulfur protein [Photorhabdus asymbiotica] Length = 244 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 5/228 (2%) Query: 27 LKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +K R + R+NP++ P TY V D +LD L YIK+ + P L+ R SCR I Sbjct: 4 MKTLRMEVMRYNPESDHEPHFITYEVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAI 62 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 63 CGSCGMMVERVPKLACKTFLRDYPQGMKVEALANFPIERDLVVDMTHFIESLEAIKPYII 122 Query: 145 TVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +Q+ K C+ C C +CP + N ++GPA + A+R+ Sbjct: 123 GNDRKPSEGPNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYN 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+RD + ER+ L ++ C + C++ CPK ++PA AI + K Sbjct: 182 LDNRDHGKKERMTQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|284046726|ref|YP_003397066.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Conexibacter woesei DSM 14684] gi|283950947|gb|ADB53691.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Conexibacter woesei DSM 14684] Length = 370 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 122/234 (52%), Gaps = 12/234 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 R+ R++P + P + + ++L+ VL+ +L K + D ++ +R SCR ICGSC Sbjct: 5 TLRLRRFDPQSGQAPYWEEFPIELEPH-RSVLEAILKAKGETDGSIGIRCSCRAAICGSC 63 Query: 89 GMNIDGTNTLACVKD--------MKDIKGAIAVYPLPHMSVIKDLVVDMS-HFYSQHRSI 139 G+ ++G LAC + I V P+ +M VIKDL+VDM + + + + Sbjct: 64 GVRVNGRAALACHTHLDKAAASGIDADGRTITVEPMGNMPVIKDLIVDMDAVHWKKIQRV 123 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 PWL P P +E + HE+ + C+ C C + C S + ++GPA +A Sbjct: 124 TPWLLARQPVPEREYIVPHENMVDVTQTMACIQCGACVSDCLSMEVDP-LFVGPAASAKA 182 Query: 200 YRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 YR++ D RD Q +RL +L EDP +Y C NC ++CPKG+ P I +++ Sbjct: 183 YRFVGDPRDAEQKQRLKDLAEDPHGIYDCTHCFNCIEACPKGVAPMSQIMRLRR 236 >gi|119356023|ref|YP_910667.1| succinate dehydrogenase subunit B [Chlorobium phaeobacteroides DSM 266] gi|119353372|gb|ABL64243.1| succinate dehydrogenase subunit B [Chlorobium phaeobacteroides DSM 266] Length = 356 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 12/259 (4%) Query: 7 PKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI 66 P S G EK +R++R+NP P D Y + ++ G VL L YI Sbjct: 7 PINSMHMTGAA-EQHKEEKRDITFRVFRFNPQVDIKPYFDDYTIPVER-GITVLRALNYI 64 Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA------VYPLPHMS 120 K +DPT++ R C+ GICGSCGM ++G + LAC + D V PL +M Sbjct: 65 KEHVDPTVSYRAFCQAGICGSCGMRVNGISKLACTTQVWDELDRCKEPGILRVEPLRNMP 124 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCS 177 IKDL+VDM + + W+ + P+ E L S ++ K D +C++CA C Sbjct: 125 PIKDLIVDMDPLVDKMKHYMNWVDSSMPESEMGKKEFLVSEDEFLKYDKATDCILCASCV 184 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 + C + Y+ PA+LL++YR +DSRD RL L ++ C C ++C Sbjct: 185 SECTILRAHK-EYVSPAVLLKSYRMNVDSRDSIHDTRLAELVKDHGVWDCTHCYRCQETC 243 Query: 238 PKGLNPAKAIAKIKMMLLD 256 K + AI I+ L+ Sbjct: 244 VKSIPIMDAIHGIRENALE 262 >gi|193213556|ref|YP_001999509.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobaculum parvum NCIB 8327] gi|193087033|gb|ACF12309.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobaculum parvum NCIB 8327] Length = 345 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 11/244 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E +R++R+NP P D Y + L+ G VL L YIK +D TLT R C+ G Sbjct: 11 ESRDVTFRVHRFNPQVDSKPYFDDYTIKLEK-GITVLRALNYIKEHVDSTLTFRAFCQAG 69 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQHR 137 ICGSC M I+ + LAC + D I + PL ++ +IKDLVV+M + + Sbjct: 70 ICGSCSMRINRISKLACTTQVWDELDKAREPGVITIEPLRNLPLIKDLVVEMDPLVGKMK 129 Query: 138 SIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 W+ + P+ E L S E+ D +C++CA C + C N Y+ P Sbjct: 130 QHSNWVDSKMPEEQWGQKEFLISEEEFSAYDKATDCILCASCVSECTILRANK-EYVSPV 188 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +LL++YR D+RD +RL L ++ C C ++C K + AI I+ Sbjct: 189 VLLKSYRMNADTRDGIHEQRLAGLVKDHGVWDCTHCYRCQETCVKNIPIMDAIHGIREDA 248 Query: 255 LDRK 258 ++R+ Sbjct: 249 IERR 252 >gi|189347816|ref|YP_001944345.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium limicola DSM 245] gi|189341963|gb|ACD91366.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium limicola DSM 245] Length = 344 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 11/244 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 EK R++R+NP P D Y + + G VL L YIK +D +++ R C+ Sbjct: 9 KEEKRDITLRVFRFNPQVDSKPYFDDYTIQTEK-GITVLRSLNYIKEHVDASVSFRAFCQ 67 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQ 135 GICGSCGM I+G + LAC + D I + PL +M +IKDL+VDM + Sbjct: 68 AGICGSCGMRINGISKLACTTQVWDELEKAREPGVIKIEPLRNMPLIKDLIVDMDPLVDK 127 Query: 136 HRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + W+++ P+ E L S E+ K D +C++CA C + C + Y+ Sbjct: 128 MKHYSNWVESRMPEHDMGKKEFLVSEEEFLKYDKATDCILCASCVSECTILRAHK-EYVS 186 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+LL++YR +DSRD RL L ++ C C ++C K + AI I+ Sbjct: 187 PAVLLKSYRMNVDSRDAIHDVRLGELVKDHGVWDCTHCYRCQETCVKHIPIMDAIHGIRE 246 Query: 253 MLLD 256 L+ Sbjct: 247 DALE 250 >gi|213052296|ref|ZP_03345174.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 234 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 3/219 (1%) Query: 34 RWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNID 93 R+NP+ P Y V D +LD L YIK+ + P L+ R SCR ICGSCGM ++ Sbjct: 3 RYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRMAICGSCGMMVN 61 Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAK 152 LAC ++D + V L + + +DLV+DM+HF +I+P++ S Sbjct: 62 NVPKLACKTFLRDYTNGMKVEALANFPIERDLVIDMTHFIESLEAIKPYIIGNSRTPDQG 121 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 +Q+ K C+ C C +CP + N ++GPA + A+R+ DSRD + Sbjct: 122 PNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSRDHGKK 180 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ER+ L P ++ C + C++ CPK ++PA AI + K Sbjct: 181 ERMAQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 219 >gi|260599494|ref|YP_003212065.1| fumarate reductase iron-sulfur subunit [Cronobacter turicensis z3032] gi|260218671|emb|CBA34013.1| Fumarate reductase iron-sulfur subunit [Cronobacter turicensis z3032] Length = 248 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E N + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMNTLRIEVVRYNPETDNAPHSAFYDVPWD-EQTSLLDALGYIKDNLAPDLSYRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P+ Sbjct: 61 AICGSCGMMVNRVPKLACKTFLRDYTSGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120 Query: 143 LKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + Q+ K C+ C C +CP + N ++GPA + A+R Sbjct: 121 IIGNTRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +DSRD+ Q R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 180 YNLDSRDKGQKARMPQLNSQNGVWTCTFVGFCSEVCPKHVDPAAAIQQSK 229 >gi|37527970|ref|NP_931315.1| fumarate reductase iron-sulfur subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787406|emb|CAE16497.1| fumarate reductase iron-sulfur protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 3/222 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+NP++ P TY + D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EVMRYNPESDHKPHFITYEIPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-K 149 ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 69 MVNRVPKLACKTFLRDYPQGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNDRRP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 +Q+ K C+ C C +CP + N ++GPA + A+R+ +D+RD Sbjct: 129 SDGPNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 188 GKKKRMPQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGK 229 >gi|18312125|ref|NP_558792.1| succinate dehydrogenase iron-sulfur subunit [Pyrobaculum aerophilum str. IM2] gi|18159558|gb|AAL62974.1| succinate dehydrogenase iron-sulfur subunit (sdhB) [Pyrobaculum aerophilum str. IM2] Length = 237 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 8/237 (3%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + ++ R++ Y V++ + VLD LL IK + DPTL +R SCR IC Sbjct: 2 KIVTVKVKRFD---GKKSWWQEYKVEVPSKRISVLDVLLKIKEEQDPTLAVRYSCRMAIC 58 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM I+G LAC + ++ + V P+ + VIKDLVVD+ + + ++++P++ Sbjct: 59 GSCGMVINGVPRLACQTLLSELGDGRLVVEPMWNHRVIKDLVVDLEPDFEKVKAVKPYII 118 Query: 145 TVSPK---PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + E Q ED +K C+ C C +CP N +++LGP L AYR Sbjct: 119 RDVKEIYESDVEFGQKPEDLEKYYNFAYCIQCGLCMAACPILGSN-EKFLGPMALNAAYR 177 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W DSRD ER ++ ++ CH C+ CP+G++P AI +K +L RK Sbjct: 178 WSADSRDRGWEERKKIIDTEDGVWPCHLAYTCSAVCPRGVDPGYAIQLLKATILRRK 234 >gi|302349238|ref|YP_003816876.1| Succinate:quinone oxidoreductase, iron-sulfur subunit B [Acidilobus saccharovorans 345-15] gi|302329650|gb|ADL19845.1| Succinate:quinone oxidoreductase, iron-sulfur subunit B [Acidilobus saccharovorans 345-15] Length = 301 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 125/245 (51%), Gaps = 11/245 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 RI R++P+ Y ++ + G VLD LL IK +D T+ +R SCR+ Sbjct: 9 SPPKQVTVRIRRYDPET-KKTWWQEYKIEA-HRGMTVLDALLKIKEDVDHTIVMRYSCRQ 66 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA----IAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 GICGSCG+ ++GT LAC + ++ + + PL + VI+DL+ D + F+++HRS Sbjct: 67 GICGSCGVVVNGTPRLACQTQLTEVVSDANPVMTIEPLYNFPVIRDLMTDFTDFFNKHRS 126 Query: 139 IEPWLKTVSPKPAKELL----QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P+L + + ++ +I CV C C +CP + +LGP Sbjct: 127 VKPYLIRNDKEEQENPKGQYDMYPDEYLQIYQYTNCVYCGLCYAACPVVAADP-EFLGPQ 185 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ A R++ D RDE ER ++ +RCH +C+ CPK ++PA AI ++ L Sbjct: 186 ALMYALRFVNDVRDEGWKERFLIVDTEHGCHRCHFAASCSAVCPKAVDPAGAIQSLRSKL 245 Query: 255 LDRKI 259 ++ Sbjct: 246 FRFRL 250 >gi|78188111|ref|YP_378449.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Chlorobium chlorochromatii CaD3] gi|78170310|gb|ABB27406.1| succinate dehydrogenase subunit B [Chlorobium chlorochromatii CaD3] Length = 345 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 11/244 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 K +R++R+NP P D Y + ++ G VL L YIK +D +L+ R C+ Sbjct: 10 EDAKKDVTFRVHRFNPQVDSKPFYDDYTIPVER-GITVLRALNYIKEHLDESLSFRAFCQ 68 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQ 135 GICGSC M I+G + LAC + D+ I + PL ++ +IKDL+VDM + Sbjct: 69 AGICGSCSMRINGISKLACTTQVWDVLATSKEVGVIKIDPLRNLPLIKDLIVDMDPLVDK 128 Query: 136 HRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + W+++ P+ + E L S E+ + D +C++CA C + C N Y+ Sbjct: 129 MKHYSNWVESTMPEASMGKKEFLISEEEFLQYDKATDCILCASCVSECSILRANK-AYVS 187 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+LL++YR +DSRD +RL L ++ C C ++C K + AI I+ Sbjct: 188 PAVLLKSYRMNVDSRDAIHDQRLAELVQDHGVWDCTHCYRCQETCVKSIPIMDAIHGIRE 247 Query: 253 MLLD 256 ++ Sbjct: 248 DAIE 251 >gi|156932388|ref|YP_001436304.1| fumarate reductase iron-sulfur subunit [Cronobacter sakazakii ATCC BAA-894] gi|156530642|gb|ABU75468.1| hypothetical protein ESA_00164 [Cronobacter sakazakii ATCC BAA-894] Length = 248 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 5/229 (2%) Query: 26 NLKEYRIY--RWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K RI R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 3 EMKTLRIEVVRYNPETDNAPHSAFYDVPWD-EQTSLLDALGYIKDNLAPDLSYRWSCRMA 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSCGM ++ LAC ++D + V L + + +DLVVDM+HF +I+P++ Sbjct: 62 ICGSCGMMVNRVPKLACKTFLRDYTSGMKVEALANFPIERDLVVDMTHFIESLEAIKPYI 121 Query: 144 KTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 Q+ K C+ C C +CP + N ++GPA + A+R+ Sbjct: 122 IGNPRKPEQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRY 180 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +DSRD+ Q R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 181 NLDSRDKGQKARMPQLNSQNGVWTCTFVGFCSEVCPKHVDPAAAIQQSK 229 >gi|257092550|ref|YP_003166191.1| fumarate reductase iron-sulfur subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045074|gb|ACV34262.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 251 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 5/233 (2%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + + E + R++P+ P + V + VL G+ YIK+ +D +L+ R SCR Sbjct: 2 SENQKVIEIEVLRYHPEKDKEPHKQVFEVPFTD-DMSVLQGVQYIKDYLDGSLSFRWSCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 ICGSCGM I+G +L+C ++D + V L H + +DLV++M F + SI+ Sbjct: 61 MAICGSCGMMINGEPSLSCQTFLRDYYPARVRVEALSHFPIERDLVINMEGFIEKLESIQ 120 Query: 141 PWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P++ P+ E LQ+ E + C+ C C +CP + NS ++GPA Sbjct: 121 PYIIPKEPRTLAQGEYLQTPEQLNAYEQFSSCINCLLCYAACPQFGLNSS-FIGPAATAL 179 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R+ +DSRD + ER++ + ++ C + C++ CPK ++PA A+ + K Sbjct: 180 LHRYNVDSRDGGKAERMELINSEEGVFNCTAVGYCSEVCPKHVDPANAVNQNK 232 >gi|224373079|ref|YP_002607451.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Nautilia profundicola AmH] gi|223588675|gb|ACM92411.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Nautilia profundicola AmH] Length = 322 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 10/240 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++YR+NP+ P + Y +D+ + G ++LD L IK +ID +L+ RRSCR GICGS Sbjct: 3 VTFKVYRYNPEVDEKPHYEKYTLDMSDDG-VILDALNKIKWEIDGSLSYRRSCRHGICGS 61 Query: 88 CGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMS--VIKDLVVDMSHFYSQHRSIEP 141 C + ++G N LAC +K + + PL VIKDLV D F+ ++ ++P Sbjct: 62 CAIKLNGKNVLACKTSIKEAVEMFGDTLVIEPLSKNKEKVIKDLVNDKKDFWDKNAKVKP 121 Query: 142 WLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +L P E L + I+ C+ C CC +C S N D +LGP L + Y Sbjct: 122 YLIAEIDEHPKSENLIKPALVEMIEEADYCIACGCCYYACESVRANKD-FLGPQALAKTY 180 Query: 201 RWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+ D RDE + ERL+ ++ ++ C C + CPKG++P I + + + + Sbjct: 181 RFTADVRDEAKKERLELVDKLGIGIWDCVKCQACIEVCPKGVDPFTKITHLHNQVFEEGV 240 >gi|119872184|ref|YP_930191.1| succinate dehydrogenase iron-sulfur subunit [Pyrobaculum islandicum DSM 4184] gi|119673592|gb|ABL87848.1| succinate dehydrogenase subunit B [Pyrobaculum islandicum DSM 4184] Length = 237 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 8/237 (3%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +I R++ Y V+ + VLD LL +K + DPTL +R SCR IC Sbjct: 2 KSVVIKIKRYD---GKKSWWQEYKVEAPSERVSVLDLLLKVKEEQDPTLAVRYSCRMAIC 58 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM I+G LAC + D+K I V PL + VIKDLVVD+ + + + ++P++ Sbjct: 59 GSCGMVINGVPRLACQTLLSDLKTDVITVEPLWNHKVIKDLVVDLEPDFEKVKKVKPYII 118 Query: 145 TVSPKPAKELLQS---HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + + E+ K C+ C C +CP + +R+LGP L AYR Sbjct: 119 RDIKEIYETDREFGQKPEELDKYYNFAYCIQCGLCMAACPVVATH-ERFLGPMALNAAYR 177 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W DSRD+ ER ++ ++ CH C+ CP+G++P +I +K LL R Sbjct: 178 WSADSRDQGWKERAKIIDVEEGVWGCHLAYTCSAVCPRGVDPGFSIQLLKAALLRRA 234 >gi|152990438|ref|YP_001356160.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Nitratiruptor sp. SB155-2] gi|151422299|dbj|BAF69803.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Nitratiruptor sp. SB155-2] Length = 318 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 8/238 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++++R+N + P DT +D+ +VLD L IK + D + + RRSCR GICGS Sbjct: 3 VTFKVFRFNAETDYLPHYDTIEMDVK-EDEVVLDILNRIKWEHDGSFSYRRSCRHGICGS 61 Query: 88 CGMNIDGTNTLACVKDM----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 C + ++G +TLAC + M + + + P+ +KD+VVD + F+ ++ +++PWL Sbjct: 62 CAVKVNGRSTLACKERMVDMIELFGNELTIEPVSKKRAVKDMVVDKADFWKKYETVKPWL 121 Query: 144 KTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + PA E + ++ +K++ C+ C CC +CP N D YLGPA +AYR+ Sbjct: 122 EAEIDEHPAMENIIPPKEAEKLEEADYCIQCGCCYYACPVVEVNED-YLGPAAFEKAYRF 180 Query: 203 LIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D RD + ERL+ ++ ++ C C ++CPK ++P I K+ + + + Sbjct: 181 TADVRDNAKKERLEIVDILGQGVWDCVKCYECAEACPKEIDPIGKITKLHNQIFEEGV 238 >gi|327310515|ref|YP_004337412.1| succinate:quinone oxidoreductase, iron-sulfur subunit B [Thermoproteus uzoniensis 768-20] gi|326946994|gb|AEA12100.1| Succinate:quinone oxidoreductase, iron-sulfur subunit B [Thermoproteus uzoniensis 768-20] Length = 237 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 8/234 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ R++ Y VD+ + VLD LL IK + DPTL +R SCR ICGSC Sbjct: 5 TVKVKRFD---GKKSWWQEYKVDVKSRRVTVLDVLLRIKEEQDPTLAVRYSCRMAICGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GM I+G LAC + +IK I V P+ + VIKDLVVD + + R ++P+ Sbjct: 62 GMVINGVPRLACQTLLTEIKDDVITVEPMWNHRVIKDLVVDTEPNFEKLRKVKPYTIRDL 121 Query: 148 PKPAKELL---QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + Q E+ K C+ C C +CP N +LGP L AYRW Sbjct: 122 KEIYESDKEIGQKPEELDKYYNFAYCIECGLCMAACPVVATNPR-FLGPMALAAAYRWSA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD+ R ++ ++ CH C+ CP+G++P AI IK L+ R Sbjct: 181 DSRDQGWPIRAKIVDTEEGVWSCHLAYTCSAVCPRGVDPGFAIQLIKAALMRRA 234 >gi|167968108|ref|ZP_02550385.1| putative fumarate reductase [iron-sulfur subunit] frdB and [Mycobacterium tuberculosis H37Ra] gi|215403408|ref|ZP_03415589.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis 02_1987] gi|215411214|ref|ZP_03420022.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis 94_M4241A] gi|215426895|ref|ZP_03424814.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis T92] gi|215430446|ref|ZP_03428365.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis EAS054] gi|215445750|ref|ZP_03432502.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis T85] gi|218753275|ref|ZP_03532071.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis GM 1503] gi|219557462|ref|ZP_03536538.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis T17] gi|254550573|ref|ZP_05141020.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186503|ref|ZP_05763977.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis CPHL_A] gi|294996519|ref|ZP_06802210.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis 210] gi|297731109|ref|ZP_06960227.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis KZN R506] gi|313658441|ref|ZP_07815321.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis KZN V2475] Length = 241 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 2 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 60 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 61 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 120 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 121 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 179 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 180 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 223 >gi|159041919|ref|YP_001541171.1| succinate dehydrogenase iron-sulfur subunit [Caldivirga maquilingensis IC-167] gi|157920754|gb|ABW02181.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Caldivirga maquilingensis IC-167] Length = 254 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 90/241 (37%), Positives = 124/241 (51%), Gaps = 9/241 (3%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++ + +R+ R++P G Y V++ N VLD LL IK D TL +R SCR G Sbjct: 13 KRRVFTFRVKRYDPKTSGY-KWSEYKVEVTN-RQTVLDALLKIKATQDSTLAVRYSCRMG 70 Query: 84 ICGSCGMNIDGTNTLACVK-DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC M I+GT LAC + I V PL ++ IKDLV DM F+ +H+S++PW Sbjct: 71 ICGSCAMVINGTPRLACETKPFELGTDVITVEPLSNLKPIKDLVTDMDEFFEKHKSVDPW 130 Query: 143 LKTVSPKPAK-----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 L K Q+ E C+ C C +CP + N + YLGP L Sbjct: 131 LIRKDEKEQFEQLNTYYPQTEEQLVNYLEFSYCIKCGACYAACPMVFLNKN-YLGPQALA 189 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 AYRW D+RDE RL ++ ++ CH C++ CPKG++PA AI +K LL Sbjct: 190 AAYRWSADNRDEGYVLRLKIIDSDNGVWSCHYSGTCSKVCPKGVDPALAINLLKKSLLTG 249 Query: 258 K 258 K Sbjct: 250 K 250 >gi|54633794|gb|AAV36007.1| hydrogenosomal succinate dehydrogenase beta subunit [Nyctotherus ovalis] Length = 320 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 119/234 (50%), Positives = 166/234 (70%), Gaps = 4/234 (1%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 ++++K + ++R++P + +P +YY+DLD CGPM LD L+ IK++ID TLT RRS Sbjct: 67 KEQKEHMKRFDVFRYDPMSSADPPHFVSYYIDLDECGPMFLDALIKIKDEIDSTLTFRRS 126 Query: 80 CREGICGSCGMNIDGTNTLACVK-DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNIDG + LAC+ K+ + PL M+V++DLVVDMS+FY+Q++ Sbjct: 127 CREGICGSCSMNIDGRHNLACIAAIPKNNLEKSFIAPLTSMNVLRDLVVDMSNFYNQYKV 186 Query: 139 IEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I+P LK + KE QS E+R KIDGLYECV+C CS+SCPSYWW+S+ YLGPAIL Sbjct: 187 IQPHLKRKTLKQPNEKEYHQSIEERAKIDGLYECVLCLSCSSSCPSYWWHSNEYLGPAIL 246 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 QA+RW+IDSRDE++ ERL+ L +L C + C+ +CPKGL+P K+ ++ Sbjct: 247 QQAFRWVIDSRDEYKEERLEMLGGDMKLDECFQVGVCSLACPKGLDPRKSTEEL 300 >gi|301064901|ref|ZP_07205264.1| succinate dehydrogenase iron-sulfur subunit [delta proteobacterium NaphS2] gi|300441023|gb|EFK05425.1| succinate dehydrogenase iron-sulfur subunit [delta proteobacterium NaphS2] Length = 242 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 127/229 (55%), Gaps = 6/229 (2%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +I R+NP+ + ++ + +LD L+ IK D TL R+SC G+CGS Sbjct: 5 LKIRRFNPETDTESRYQDFRIEAE-PDERILDVLMRIKRFQDGTLGFRKSCAHGVCGSDA 63 Query: 90 MNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 M I+G + LAC ++ + ++ + PL H+ V +DL+VD + F+ + RS++P+L Sbjct: 64 MRINGKDRLACKTLVRDVAQHGEESVLIEPLRHLPVERDLIVDQTAFFERFRSVKPFLIN 123 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P P +E LQS ++R D C++C+ C ++CP N +LGPA ++QA+R+L D Sbjct: 124 KEPPPERERLQSPKERMAFDDATNCILCSACFSACPILEENQS-FLGPAAVVQAFRFLAD 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 SRD+ ERL L ++ C CT++CP+ + K I + K M+ Sbjct: 183 SRDKGFEERLPVLNASDGVWPCQNHFECTRACPRAIKITKRINETKRMI 231 >gi|41033565|emb|CAF18449.1| putative succinate dehydrogenase Fe-S protein subunit B, succinate dehydrogenase/fumarate reductase [Thermoproteus tenax] Length = 237 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 119/234 (50%), Gaps = 8/234 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++ R+N + Y VD+ + VLD LL IK ++DPTL +R SCR ICGSC Sbjct: 5 TVKVKRFNGERS---WWQEYKVDIKSRKISVLDVLLKIKEEVDPTLAVRYSCRMAICGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GM I+G LAC + +IK I V P+ + VIKDLVVD + + R I+P++ + Sbjct: 62 GMVINGVPRLACQTLLTEIKDDVITVEPMWNHRVIKDLVVDTEPNFEKLRQIKPYIVRDT 121 Query: 148 PKPAKELL---QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + Q E+ K C+ C C ++CP N +LGP L YRW Sbjct: 122 KELFESDKEFGQRPEELDKYYNFAYCIECGLCMSACPVVATNPR-FLGPMALAATYRWSA 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DSRD ER ++ ++ CH C+ CP+G++P AI +K +L R Sbjct: 181 DSRDRGWAERAKIVDTNDGVWSCHLAYTCSAVCPRGVDPGFAIQLVKSAILRRA 234 >gi|119946885|ref|YP_944565.1| fumarate reductase iron-sulfur subunit [Psychromonas ingrahamii 37] gi|119865489|gb|ABM04966.1| succinate dehydrogenase subunit B [Psychromonas ingrahamii 37] Length = 245 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 5/228 (2%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + R+ P+ P ++ V + VL+ L YIK+ +D T++ R SCR ICG Sbjct: 5 TITIDVLRYRPEMDEKPFTQSFEVPY-SPDLSVLESLQYIKDHLDSTVSFRWSCRMAICG 63 Query: 87 SCGMNIDGTNTLACVKDMK-DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SCGM ++G L C ++ +++ PL + + +DLVV M F + S++P+L Sbjct: 64 SCGMMVNGVPKLGCKVFLRDYFPKKVSLAPLANFPIERDLVVVMDDFIDKLESVKPYLIP 123 Query: 146 VSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K Q+ +K C+ C C +CP Y ++ GPA L R+ Sbjct: 124 EKEKDLAEGPHRQTPLQMEKFKQFSMCINCGLCYAACPQYAL-DKKFTGPAALALLARYN 182 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 DSRD + ER+ + ++ C + C+ CPK ++PA AI +K Sbjct: 183 RDSRDNGEAERMKIVNQEEGVWGCTFVGYCSVVCPKDVDPAAAIQLLK 230 >gi|145220440|ref|YP_001131149.1| succinate dehydrogenase subunit B [Prosthecochloris vibrioformis DSM 265] gi|145206604|gb|ABP37647.1| succinate dehydrogenase subunit B [Chlorobium phaeovibrioides DSM 265] Length = 344 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 11/249 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + K R++R NP P D Y + ++ G VL L YIK ID +++ R Sbjct: 6 DQHNEGKRDVTLRVFRLNPQVDSKPYYDDYTIPVER-GITVLRALNYIKENIDASISYRV 64 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHF 132 C+ GICGSCGM I+G + LAC + D I + PL +M +IKDL+VDM Sbjct: 65 FCQAGICGSCGMRINGISKLACTTQVWDELSKCREEGIIKIEPLRNMPLIKDLIVDMDPL 124 Query: 133 YSQHRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 ++ + W+ + P+ E L S E+ + D +C++CA C + C N D Sbjct: 125 VAKMKHYSNWVDSTMPEAEMGKKEFLVSEEEFLRYDKATDCILCASCVSECSILRANKD- 183 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y+ PA+LL++YR DSRD RL L ++ C C ++C K + AI Sbjct: 184 YVSPAVLLKSYRMNADSRDGIHDIRLAELVQDHGVWDCTHCYRCQETCVKSIPIMDAIHG 243 Query: 250 IKMMLLDRK 258 I+ ++ + Sbjct: 244 IREDAIESR 252 >gi|148822776|ref|YP_001287530.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis F11] gi|289554656|ref|ZP_06443866.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis KZN 605] gi|297634122|ref|ZP_06951902.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis KZN 4207] gi|148721303|gb|ABR05928.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis F11] gi|289439288|gb|EFD21781.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis KZN 605] gi|328459143|gb|AEB04566.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis KZN 4207] Length = 246 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 7 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 65 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 66 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 125 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 126 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 184 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 185 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 228 >gi|126660714|ref|ZP_01731813.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. CCY0110] gi|126618012|gb|EAZ88782.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. CCY0110] Length = 327 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R P P + TY +++ G +L+ L IK + D +L R++CR ICGSC Sbjct: 5 FKVWRQKPHQS--PQLQTYKLEVQA-GNTILECLNRIKWEQDGSLAFRKNCRNTICGSCS 61 Query: 90 MNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC ++ I + PL +M VIKDLVVDMS F+ + + Sbjct: 62 MRINGRSALACKQNVGQELEMVSASNSGDVPTITIAPLGNMPVIKDLVVDMSSFWDKLQE 121 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ T K P +E LQ+ E+R ++D C+MC C + C + NS ++GP L Sbjct: 122 VDPYVSTQGRKVPEREFLQTPEERSQLDQTGNCIMCGACYSECNALTVNS-EFVGPHALA 180 Query: 198 QAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A R + DSRD ERL+ ++ C C CP + P I +K +LD Sbjct: 181 KAQRMVADSRDTEIEERLETYNQGTQGVWGCTRCYYCNAVCPMEVAPMNQIGHLKQKILD 240 Query: 257 RK 258 RK Sbjct: 241 RK 242 >gi|67925468|ref|ZP_00518809.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Crocosphaera watsonii WH 8501] gi|67852694|gb|EAM48112.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Crocosphaera watsonii WH 8501] Length = 354 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 17/241 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R P K +P +++Y +++ G +L+ L IK + D +L R++CR ICGSCG Sbjct: 25 FKVWRQKP--KKSPQLESYQLEVQA-GNTILECLNRIKWEQDGSLAFRKNCRNTICGSCG 81 Query: 90 MNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC ++ I V PL +M VIKDLVVDMS F+ + + Sbjct: 82 MRINGRSALACKQNVGQELEMISASSNGDIPTITVAPLGNMPVIKDLVVDMSGFWDKLQE 141 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ T K P +E LQ+ ++R ++D C+MC C + C + N ++GP L Sbjct: 142 VDPYVSTKGRKIPEREFLQTPDERSQLDQTGNCIMCGACYSECNALTVNP-EFVGPHALA 200 Query: 198 QAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A R + DSRD ERLDN ++ C C CP + P I+ +K +LD Sbjct: 201 KAERMVADSRDTGTEERLDNYNQVEEGVWGCTRCYYCNAVCPMEVAPMDQISHLKEEILD 260 Query: 257 R 257 R Sbjct: 261 R 261 >gi|15608691|ref|NP_216069.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis H37Rv] gi|15841020|ref|NP_336057.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis CDC1551] gi|148661349|ref|YP_001282872.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis H37Ra] gi|253799393|ref|YP_003032394.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis KZN 1435] gi|260204837|ref|ZP_05772328.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC [Mycobacterium tuberculosis K85] gi|289447163|ref|ZP_06436907.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis CPHL_A] gi|289569589|ref|ZP_06449816.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis T17] gi|289574236|ref|ZP_06454463.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis K85] gi|289745308|ref|ZP_06504686.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis 02_1987] gi|289750119|ref|ZP_06509497.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis T92] gi|289753639|ref|ZP_06513017.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis EAS054] gi|289757668|ref|ZP_06517046.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis T85] gi|289761715|ref|ZP_06521093.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis GM 1503] gi|298525064|ref|ZP_07012473.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis 94_M4241A] gi|308370759|ref|ZP_07422620.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu003] gi|308371997|ref|ZP_07426988.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu004] gi|308374343|ref|ZP_07435686.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu006] gi|308375614|ref|ZP_07444512.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu007] gi|308376759|ref|ZP_07439932.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu008] gi|308380111|ref|ZP_07488737.2| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu011] gi|1706899|sp|Q10761|FRDB_MYCTU RecName: Full=Fumarate reductase iron-sulfur subunit gi|1403489|emb|CAA98310.1| PROBABLE FUMARATE REDUCTASE [IRON-SULFUR SUBUNIT] FRDB (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium tuberculosis H37Rv] gi|13881230|gb|AAK45871.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis CDC1551] gi|148505501|gb|ABQ73310.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis H37Ra] gi|253320896|gb|ACT25499.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis KZN 1435] gi|289420121|gb|EFD17322.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis CPHL_A] gi|289538667|gb|EFD43245.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis K85] gi|289543343|gb|EFD46991.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis T17] gi|289685836|gb|EFD53324.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis 02_1987] gi|289690706|gb|EFD58135.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis T92] gi|289694226|gb|EFD61655.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis EAS054] gi|289709221|gb|EFD73237.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis GM 1503] gi|289713232|gb|EFD77244.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis T85] gi|298494858|gb|EFI30152.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis 94_M4241A] gi|308330960|gb|EFP19811.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu003] gi|308334782|gb|EFP23633.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu004] gi|308342272|gb|EFP31123.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu006] gi|308345766|gb|EFP34617.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu007] gi|308350066|gb|EFP38917.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu008] gi|308362586|gb|EFP51437.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu011] gi|323720002|gb|EGB29114.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis CDC1551A] gi|326903181|gb|EGE50114.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis W-148] Length = 247 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|110597227|ref|ZP_01385515.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium ferrooxidans DSM 13031] gi|110341063|gb|EAT59531.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium ferrooxidans DSM 13031] Length = 344 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 11/249 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + K +R++R+NP D Y + ++ G VL L YIK +D +++ R Sbjct: 6 DQHKEGKRDVTFRVFRFNPQVDSKSYFDDYTIPVER-GITVLRALNYIKEHVDASVSFRA 64 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHF 132 C+ GICGSCGM ++G + LAC + D+ I V PL ++ +IKDL+VDM Sbjct: 65 FCQAGICGSCGMRVNGISMLACTTQVWDMLAKSKEEGVIKVEPLRNLPLIKDLIVDMDPL 124 Query: 133 YSQHRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + W+ + P+ E L S E+ K D +C++CA C + C N Sbjct: 125 VDKMKHYSNWVDSTMPESEMGKKEFLVSEEEFLKYDKATDCILCASCVSECSILRANK-E 183 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y+ PA+LL++YR +D+RD RL L ++ C C +SC K + AI Sbjct: 184 YVSPAVLLKSYRMNVDTRDSMHDLRLAELVKDHGVWDCTHCYRCQESCVKSIPIMDAIHG 243 Query: 250 IKMMLLDRK 258 I+ L+ + Sbjct: 244 IREDALESR 252 >gi|332527673|ref|ZP_08403718.1| fumarate reductase iron-sulfur subunit [Rubrivivax benzoatilyticus JA2] gi|332112075|gb|EGJ12051.1| fumarate reductase iron-sulfur subunit [Rubrivivax benzoatilyticus JA2] Length = 259 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 5/232 (2%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E R++P+ P ++ V D+ VL GL YIK+ D +LT R SCR Sbjct: 9 ATGRTIEIECLRFDPETDSAPRFQSWQVPFDD-DTSVLQGLQYIKDHFDGSLTFRWSCRM 67 Query: 83 GICGSCGMNIDGTNTLACVKDMK-DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 ICGSCG I+G L+C ++ + V PL + ++++DLVVD + F + S++P Sbjct: 68 AICGSCGKMINGVPQLSCHAFLRDYWPNKVRVEPLANFAIVRDLVVDQNEFLDKLESVKP 127 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W++ + Q+ + +C+ C C +CP ++GPA L Sbjct: 128 WIQPCENRSVADGPSRQTPAQLDQYYQFSQCINCLLCYAACPQVGLKP-EFIGPAALALM 186 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R+ DSRD R D ++ C + C++ CPKG++PA AI + K Sbjct: 187 HRYNADSRDRGWEARADVANAEEGVWGCTLVGYCSEVCPKGVDPAHAINQNK 238 >gi|308378969|ref|ZP_07668872.1| LOW QUALITY PROTEIN: fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu010] gi|308358705|gb|EFP47556.1| LOW QUALITY PROTEIN: fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis SUMu010] Length = 248 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|41410452|emb|CAE51196.1| putative succinate dehydrogenase beta subunit [Thermus thermophilus] Length = 232 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 4/230 (1%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 I R G Y ++ VLD LL +K + D +L R SC +G+CGS Sbjct: 5 LEIRRQ-AAPGGPSRWARYVLEASPRE-RVLDLLLRVKAEEDGSLAFRYSCGQGVCGSDA 62 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 + I+G N LAC +KD+ + V PL +KDL+VDM F++ +R+++P+L P Sbjct: 63 LTINGRNRLACKTLVKDVGPWVRVEPLKTFRPLKDLIVDMEPFFAAYRAVKPYLINPEPP 122 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P +E LQS E+R + C++C C++SCP YW N Y+GPA ++QA+R+L DSRD Sbjct: 123 PERERLQSPEERACYEEATRCILCGACTSSCPVYWVNGR-YIGPAAIVQAHRFLFDSRDL 181 Query: 210 FQGERLDN-LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ERL L ++RC NCT++CP+G++ + I ++K +L+ Sbjct: 182 GAEERLAGWLGGRSGVWRCRNAHNCTEACPRGIDVNRLITEVKRRILEEA 231 >gi|224989948|ref|YP_002644635.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo 172] gi|224773061|dbj|BAH25867.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo 172] Length = 250 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|283853418|ref|ZP_06370663.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio sp. FW1012B] gi|283571182|gb|EFC19197.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio sp. FW1012B] Length = 251 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP D P MDT +D + + L I+ +IDPTL CR G Sbjct: 2 GRTLTFNIFRYNPTDADSTPHMDTIKLD-ETERMTLFIALNRIREEIDPTLMFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEPW 142 ICG+C M I+G LAC KD+ I + PLP ++ DL VD ++ ++ +E W Sbjct: 61 ICGACAMVINGRPGLACHTKTKDLPDEITLMPLPVFKLVGDLSVDTGTWFRGMYQKVESW 120 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E + ++I L C+ C CC +C + D +LG L + Sbjct: 121 VHTKKVFDPTAQEERMDNALAEQIYELDRCIECGCCVAACGTALMRPD-FLGAVALNRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+++D RDE + D + ++ C ++ C CPK + + + K++ + + Sbjct: 180 RFILDPRDERTEKDYFDIVGTDEGIFGCMGLLACEDVCPKEIPLQEQLGKLRRKMALAAV 239 >gi|254364423|ref|ZP_04980469.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis str. Haarlem] gi|134149937|gb|EBA41982.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis str. Haarlem] Length = 247 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 5/224 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E Q+ + C+ C C +CP Y + D +LGPA + R+ +DSR Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYLACPVYALDPD-FLGPAAIALGQRYNLDSR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D+ +R D L + C + C+ +CPKG++PA AI + K Sbjct: 186 DQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229 >gi|121998231|ref|YP_001003018.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Halorhodospira halophila SL1] gi|121589636|gb|ABM62216.1| succinate dehydrogenase subunit B [Halorhodospira halophila SL1] Length = 254 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 5/227 (2%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + R++P+ P Y V VL+GL YIK+ +D TLT R SCR ICGS Sbjct: 7 ITLEVQRYHPEQDAAPRWQRYTVPYT-PDMSVLEGLQYIKDHLDGTLTFRWSCRMAICGS 65 Query: 88 CGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CG IDG LAC ++D + V L H + +DLV+D + F + + +L Sbjct: 66 CGCMIDGEPELACHVFLRDYAPGPVRVTALDHFPIQRDLVIDHTDFLEKLETARAYLIPA 125 Query: 147 S--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 Q+ E+ +C+ C C +CP Y W+ D +LGP IL R+ + Sbjct: 126 DDRTPADGTYRQTPEEMSDYYAYAQCINCLLCYAACPQYGWHPD-FLGPGILALVQRYNL 184 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D RD R ++ ++ C + C++ CPKG++PA+AI + K Sbjct: 185 DHRDGGSRAREGVVDAEEGVWGCTLVGYCSEVCPKGVDPARAINQNK 231 >gi|126460731|ref|YP_001057009.1| succinate dehydrogenase iron-sulfur subunit [Pyrobaculum calidifontis JCM 11548] gi|126250452|gb|ABO09543.1| succinate dehydrogenase subunit B [Pyrobaculum calidifontis JCM 11548] Length = 236 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 8/237 (3%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 ++ R++ Y V++ + VLD LL IK + DPTL +R SCR IC Sbjct: 2 KSVIVKVKRYD---GSKSWWQEYKVEVPSERISVLDVLLKIKEEQDPTLAVRYSCRMAIC 58 Query: 86 GSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 GSCGM I+G LAC + + V PL + VIKDLVVD + + RS++P++ Sbjct: 59 GSCGMVINGLPRLACQTLLSELKDSRLTVEPLWNHKVIKDLVVDTEPDFEKVRSVKPYII 118 Query: 145 TVSPK---PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + E Q E+ +K C+ C C +CP N +++LGP L AYR Sbjct: 119 RDAKEIYGSDAEFGQRPEELEKYYNFAYCIQCGLCMAACPILGSN-EKFLGPMALAAAYR 177 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W DSRD R ++ L+ CH C+ CP+G++P AI +K +L R+ Sbjct: 178 WSADSRDRGWEIRRAIIDAEDGLWPCHLAYTCSAVCPRGVDPGYAIQLLKSAILRRR 234 >gi|312115714|ref|YP_004013310.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodomicrobium vannielii ATCC 17100] gi|311220843|gb|ADP72211.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodomicrobium vannielii ATCC 17100] Length = 251 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 5/231 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E R+ R+NP+ P ++ V VL GL +IK+ +D +LT R SCR Sbjct: 5 ADKTIELRVLRYNPETDERPHHQSFTVPYT-SDMSVLQGLQWIKDTVDGSLTYRWSCRMA 63 Query: 84 ICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCGM I+ LAC ++D G + V PL H + +DLVV + F + S+ PW Sbjct: 64 ICGSCGMMINAEPKLACHTLLRDLAPGPVTVEPLNHFPIERDLVVTVDDFVKKIESVTPW 123 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L PKP Q+ + C+ C C +CP Y N +++GPA + Sbjct: 124 LIPKHPKPVSEGPYNQTPAQLAAYENFSACINCMLCYAACPQYGENP-KFIGPAAMAILQ 182 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ DSRD R+D + ++ C + C+ CPK ++P A+ + K Sbjct: 183 RYDGDSRDGGSALRIDAVHGEDGVWGCTAVGACSDVCPKAVDPMHAVNQNK 233 >gi|167042676|gb|ABZ07397.1| putative 4Fe-4S binding domain protein [uncultured marine crenarchaeote HF4000_ANIW133M9] Length = 256 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 130/248 (52%), Gaps = 6/248 (2%) Query: 12 VKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID 71 V + RI ++NP + V + VLD +L +KN D Sbjct: 7 VSSQEKHEKTKPSTKSITLRISKFNPGKDHATTFLEFPVSYEK-WTTVLDAILEVKNYHD 65 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMS 130 ++ +R SCR+ +CGSCGM I+G LAC + ++ + V P+ + +I+DLVV Sbjct: 66 HSIGVRYSCRQAMCGSCGMIINGKPKLACFTKISELDSDVVTVEPMNNFPLIRDLVVGFE 125 Query: 131 HFYSQHRSIEPWLKTVSPKPA---KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 +S H+ I+P++ + + KE LQ+ ED +K C+ C C+++CP+ Sbjct: 126 KMFSTHKRIKPYIIREDSEISSGAKEFLQTPEDVEKYIQFSGCIKCGLCNSACPTMAV-D 184 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GP L QAYR++ D+RD+ + ERL +++ ++ CH +C+Q CPKG++PA I Sbjct: 185 STFIGPQGLAQAYRYIADNRDQGKDERLRIIDERHGIWGCHFAGSCSQVCPKGVDPAMGI 244 Query: 248 AKIKMMLL 255 ++ LL Sbjct: 245 QLLRGYLL 252 >gi|172038157|ref|YP_001804658.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. ATCC 51142] gi|171699611|gb|ACB52592.1| succinate dehydrogenase iron-sulphur protein subunit [Cyanothece sp. ATCC 51142] Length = 331 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R P P + TY +++ G +L+ L IK + D +L R++CR ICGSC Sbjct: 10 FKVWRQKPHQS--PQLQTYKLEVQA-GNTILECLNRIKWEQDGSLAFRKNCRNTICGSCS 66 Query: 90 MNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC ++ I + PL +M VIKDLVVDMS F+ + + Sbjct: 67 MRINGRSALACKQNVGQELEMASSSNNGDVPTITIAPLGNMPVIKDLVVDMSGFWDKLQK 126 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ T K P +E LQ+ E+R ++D C+MC C + C + N ++GP L Sbjct: 127 VDPYVSTQGRKIPEREFLQTPEERSQLDQTGNCIMCGACYSECNALTVNP-EFVGPHALA 185 Query: 198 QAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A R + DSRD RL+ ++ C C CP + P I +K +LD Sbjct: 186 KAQRMVADSRDTEVEARLETYNQGTQGVWGCTRCYYCNAVCPMEVAPMDQIGYLKQDILD 245 Query: 257 RK 258 RK Sbjct: 246 RK 247 >gi|34498823|ref|NP_903038.1| fumarate reductase iron-sulfur subunit [Chromobacterium violaceum ATCC 12472] gi|34104675|gb|AAQ61032.1| fumarate reductase, subunit B [Chromobacterium violaceum ATCC 12472] Length = 248 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 4/233 (1%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + R+ P+ P + + V + VL GL YI++ +D TL R SCR+ IC Sbjct: 4 KTIHIEVLRYRPEQDKEPWLQGFDVPYSD-DMSVLQGLQYIRDYLDGTLAFRWSCRQAIC 62 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--L 143 GSCGM +DG LAC ++D G + + PL H + +DLVV + F + SI P+ Sbjct: 63 GSCGMMVDGVPKLACKTFLRDYPGRVRIEPLNHFPIERDLVVVLDDFIDKLESITPYIVP 122 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K P E Q+ C+ C C +CP Y NSD +LGP + +R+ Sbjct: 123 KEDKPLSEGEYQQTPAQMDWYAQFSGCINCLLCYAACPQYGLNSD-FLGPGAIALLHRYN 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DSRD +R+ L ++ C + C++ CPK ++PA A+ K + Sbjct: 182 QDSRDGASEQRMALLAAQEGVFNCTAVGYCSEVCPKAVDPANAVNLNKTEVAK 234 >gi|194333093|ref|YP_002014953.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Prosthecochloris aestuarii DSM 271] gi|194310911|gb|ACF45306.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Prosthecochloris aestuarii DSM 271] Length = 340 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 11/246 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 E +R+ R+NP P D Y + ++ G VL L YIK +D +++ R C+ Sbjct: 5 KEEMRDITFRVLRFNPQIDNKPYFDDYTIPVEK-GITVLRALNYIKEHVDASVSFRAFCQ 63 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQ 135 GICGSCGM I+G + LAC + D I V PL +M +KDL+VDM + Sbjct: 64 AGICGSCGMRINGISKLACTTQVWDEIERCKVANVIKVEPLRNMPHVKDLIVDMDPMVEK 123 Query: 136 HRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + W+++ P+ E L S E+ Q+ D +C++CA C + C N Y+ Sbjct: 124 MKQYSNWIESTMPESQMGDKEFLISEEEFQEYDKATDCILCASCMSECSILRANK-EYVA 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PAILL+++R +DSRD +R+ L ++ C C ++C K + AI ++ Sbjct: 183 PAILLKSHRMNVDSRDGSHDKRMAELVKDHGVWDCTHCYRCQETCVKNIPIMDAIHGVRE 242 Query: 253 MLLDRK 258 L + Sbjct: 243 DALAAR 248 >gi|183598053|ref|ZP_02959546.1| hypothetical protein PROSTU_01410 [Providencia stuartii ATCC 25827] gi|188022833|gb|EDU60873.1| hypothetical protein PROSTU_01410 [Providencia stuartii ATCC 25827] Length = 244 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 3/214 (1%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 I R+NP+ P + Y V D +LD L YIK+ + P L+ R SCR ICGSCGM Sbjct: 10 EIMRYNPETDNEPHLVAYDVPYD-EQTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PK 149 +D LAC ++D + V PL + + +DLVVDM+HF + +I+P++ Sbjct: 69 MVDNVPKLACKTFLRDYPEGLKVEPLGNFPIERDLVVDMTHFIERLEAIKPYIIGNDRKP 128 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 Q+ K C+ C C +CP + N ++GPA + A R+ +D+RD Sbjct: 129 SEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFVGPAAITLAERYNLDNRDH 187 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ER+ L ++ C + C++ CPK ++P Sbjct: 188 GAKERMPLLNGDDGVWSCTFVGYCSEVCPKHVDP 221 >gi|78777227|ref|YP_393542.1| succinate dehydrogenase/fumarate reductase subunit B [Sulfurimonas denitrificans DSM 1251] gi|78497767|gb|ABB44307.1| Succinate dehydrogenase/fumarate reductase subunit B [Sulfurimonas denitrificans DSM 1251] Length = 325 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 7/241 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++++R+N D P + Y +D+ + +VLD L IK D + + RRSCR G Sbjct: 7 STQKVNFKVFRFNADEDYLPYYENYTMDITSEE-VVLDVLNRIKWDYDGSFSYRRSCRHG 65 Query: 84 ICGSCGMNIDGTNTLACV----KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ICG+C + ++G +TLAC ++ I + PL IKD+++D F+ +H ++ Sbjct: 66 ICGACAIKVNGRSTLACKESMSTMIEYFGNEITLEPLSTKRAIKDMIIDKGDFWEKHAAV 125 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+L PA E L S D +++D C+ C C +CP NSD + GPA + Sbjct: 126 TPYLVADIDESPACENLVSPHDSEELDEADLCIQCGACHYACPVVEINSD-FFGPAAFVA 184 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR+ D RD + ++ E+ ++ C + CT+ CPKG+NP I K+ M + Sbjct: 185 AYRFESDVRDSDKQRLINVNEEKQGVWDCVKCIECTEVCPKGINPFSKITKLHQMAFKKG 244 Query: 259 I 259 + Sbjct: 245 V 245 >gi|284162935|ref|YP_003401558.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Archaeoglobus profundus DSM 5631] gi|284012932|gb|ADB58885.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Archaeoglobus profundus DSM 5631] Length = 221 Score = 188 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 13/228 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++RI R++ D + V + G VL+ L YIK ID +L R SCR GICGSC Sbjct: 2 KFRIKRFD---GKRFYWDEFEVPV-RKGMTVLEALYYIKENIDGSLAFRASCRMGICGSC 57 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M I+G LAC + + ++ + PL + +VIKDLV D + F+++ ++++P+L S Sbjct: 58 AMVINGKPRLACETQVSSLGKSVKIEPLRNFNVIKDLVTDFAGFFNRIKTVKPYLIRESD 117 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ E +K C C C ++CP LGPA ++ AYR+ DSRD Sbjct: 118 GE---IRQTPEQLKKYYIYTLCTKCGSCISACPVAKST----LGPAPIVIAYRFNEDSRD 170 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + ERL L D ++ CH + C++ CPK LNPA+ I K+++ +L Sbjct: 171 EGKEERLKILSDY--IWHCHFVSECSEVCPKNLNPAEIIQKLRLEVLK 216 >gi|86609940|ref|YP_478702.1| succinate dehydrogenase iron-sulfur subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558482|gb|ABD03439.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 343 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 12/240 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 E++I+R P P +++++ + G +LD L IK + D +L R++CR ICGS Sbjct: 3 VEFQIFRQLP--PEPPRWQSFWLE-TSPGATILDCLNQIKWEQDGSLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 C M I+G LAC + + I + PL ++ V++DLVVDM F++ ++ Sbjct: 60 CAMRINGRAALACGRHVGEELDPRSPQPQPIRIGPLGNLPVLRDLVVDMQPFWNDLSRVD 119 Query: 141 PWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P++ T + P +E LQ +R+ ++ C++C C + C + N ++GP L +A Sbjct: 120 PFVSTAGRRIPEREFLQLPAEREHLNAAGGCILCGACYSDCNAKEVNP-EFVGPHALARA 178 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R + DSRD + +RL L+ ++ C NC CP G+ P I ++K +L R + Sbjct: 179 NRLVQDSRDSQREQRLQALDSLAGVWGCTRCWNCNSVCPMGVAPLDQITELKQGILSRPV 238 >gi|78187836|ref|YP_375879.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Chlorobium luteolum DSM 273] gi|78167738|gb|ABB24836.1| succinate dehydrogenase subunit B [Chlorobium luteolum DSM 273] Length = 344 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 11/241 (4%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 K +R++R NP P D Y + ++ G VL L YIK ID +++ R C+ GI Sbjct: 12 KRDVTFRVFRLNPQVDSKPYFDDYTIPVER-GITVLRALNYIKENIDASVSYRVFCQAGI 70 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CGSCGM I+G + LAC + D I + PL ++ ++KDL+VDM + + Sbjct: 71 CGSCGMRINGISKLACTTQVWDELPKCREAGIIKIEPLRNLPLLKDLIVDMDPLVGKMKH 130 Query: 139 IEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 W+++ P+P E L S E+ + D +C++CA C + C N Y+ PA+ Sbjct: 131 YRNWVESSMPEPEMGKKEFLVSEEEFSRYDKATDCILCASCVSECSILRANK-EYVSPAV 189 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LL++YR +D+RD RL L ++ C C ++C K + +AI I+ + Sbjct: 190 LLKSYRMNVDTRDSLHDVRLAELVQDHGVWDCTHCYRCQETCVKNIPIMEAIHGIREDAI 249 Query: 256 D 256 + Sbjct: 250 E 250 >gi|332706511|ref|ZP_08426572.1| succinate dehydrogenase subunit B [Lyngbya majuscula 3L] gi|332354395|gb|EGJ33874.1| succinate dehydrogenase subunit B [Lyngbya majuscula 3L] Length = 380 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 17/252 (6%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 WN +++I R P + TY +D++ G +L+ L IK + D TL R Sbjct: 40 WNIQELSFMQVDFKIIRQT--QNTAPLLQTYKLDVEK-GNTILECLNRIKWEQDGTLAFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-----------VKDMKDIKGAIAVYPLPHMSVIKDLV 126 ++CR ICGSCG+ I+G + LAC + I + PL +M VIKDLV Sbjct: 97 KNCRNTICGSCGIRINGRSALACKENVGNELGNQQLPDESKIPEITIAPLGNMPVIKDLV 156 Query: 127 VDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V+MS F+ +++P++ T + K P +E LQS E+R + C+MC C + C + Sbjct: 157 VEMSSFWDNLEAVDPYVSTAARKIPEREFLQSPEERSHLAQAGNCIMCGACYSECNAKEV 216 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA 244 N D ++GP L +A R ++DSRD RL+ + ++ C M C CP G+ P Sbjct: 217 NRD-FVGPHALAKAQRLVVDSRDNTTENRLEKYNEGTKGVWGCTRCMMCNAVCPMGVAPM 275 Query: 245 KAIAKIKMMLLD 256 I KIK +L+ Sbjct: 276 DQIGKIKQDILE 287 >gi|16082038|ref|NP_394462.1| succinate dehydrogenase iron-sulfur subunit [Thermoplasma acidophilum DSM 1728] gi|10640317|emb|CAC12131.1| probable fumarate reductase, subunit B [Thermoplasma acidophilum] Length = 240 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 127/230 (55%), Gaps = 6/230 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ I R D G TY V D VL+GLLYIK +D +L+ R SCR ICGSC Sbjct: 6 EFEIKR--KDQSGKVYYSTYKVPKDK-ISTVLEGLLYIKENLDQSLSFRYSCRMEICGSC 62 Query: 89 GMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GM IDG +AC ++D K I + PL H VI+DLVVD+ F+ ++R ++P++ Sbjct: 63 GMEIDGKPRMACSTIVEDLKKDKIRIEPLRHYKVIRDLVVDIDPFFEKYREVKPYIIRDD 122 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K KEL Q+ E + C+ C C +CP + +YLGPA L A+R++ D+ Sbjct: 123 DGKYDKELPQTPEQFHEYANFAMCIKCGLCMAACP-IEGSDPQYLGPAPLAAAWRYIADN 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD+ R++ ++ RCH CT+ CPKG++P+ AI K++ L Sbjct: 182 RDKGAKYRVEIVDGEEGTSRCHFAGECTEVCPKGVDPSFAIQKLRRTALK 231 >gi|90407178|ref|ZP_01215366.1| succinate dehydrogenase [Psychromonas sp. CNPT3] gi|90311754|gb|EAS39851.1| succinate dehydrogenase [Psychromonas sp. CNPT3] Length = 245 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 5/231 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K++ I R++P+ P ++ + D +LD L YIK+ ID T++ R SC+ Sbjct: 2 SKDMMLIDILRYHPETDDKPYTQSFELPYD-ENMSILDALQYIKDNIDATVSFRWSCKMA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSCG+ ++ L C ++D I++ PL + + +DLVV M F + S++P+ Sbjct: 61 ICGSCGLMVNNVPKLGCKVFLRDYYPKTISLAPLTNFPIERDLVVVMDDFMEKLESVKPY 120 Query: 143 LKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L E Q+ +K C+ C C +CP Y ++GPA L Sbjct: 121 LIPGDNVCTAGGEYKQTPLQMEKYKQFSMCINCGLCYAACPQYGL-DKHFIGPAALALLA 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ D RD +R+ + ++ C + C+ CPKG++PA AI +K Sbjct: 180 RYERDDRDAGSAQRMKIVNQEEGVWGCTFVGYCSVVCPKGVDPAAAIQLLK 230 >gi|239905216|ref|YP_002951955.1| fumarate reductase iron-sulfur protein [Desulfovibrio magneticus RS-1] gi|239795080|dbj|BAH74069.1| fumarate reductase iron-sulfur protein [Desulfovibrio magneticus RS-1] Length = 251 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 7/239 (2%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + I+R+NP D +P MDT+ + + + L I+ +IDPTL CR GI Sbjct: 3 RTLTFNIFRYNPSDPASSPHMDTFTLP-ETERMTLFIALNKIREEIDPTLMFDFCCRAGI 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEPWL 143 CG+C M I+G LAC KD+ I + PLP ++ DL VD ++ ++ +E W+ Sbjct: 62 CGACAMVINGRPGLACHTKTKDMPEDITLMPLPVFKLVGDLSVDTGTWFRGMYQKVESWV 121 Query: 144 KTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 T AKE + ++I L C+ C CC +C + D +LG L + R Sbjct: 122 HTDKVFDPAAKEERMDNALAEQIYELDRCIECGCCVAACGTALMRED-FLGAVALNRLAR 180 Query: 202 WLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +++D RDE + D + ++ C ++ C CPK + + + K++ + + Sbjct: 181 FILDPRDERTEKAYFDIVGTDEGIFGCMGLLACEDVCPKQIPLQEQLGKLRRKMALAAV 239 >gi|239908065|ref|YP_002954806.1| fumarate reductase iron-sulfur protein [Desulfovibrio magneticus RS-1] gi|239797931|dbj|BAH76920.1| fumarate reductase iron-sulfur protein [Desulfovibrio magneticus RS-1] Length = 251 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP D +P MD + +D + + L I+ +IDPTL CR G Sbjct: 2 GRTLTFNIFRYNPSDPASSPHMDKFTLD-ETERMTLFIALNRIREEIDPTLMFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEPW 142 ICG+C M I+G LAC K++ I + PLP ++ DL VD ++ ++ +E W Sbjct: 61 ICGACAMVINGRPGLACHTKTKEMPAEITLMPLPVFKLVGDLSVDTGTWFRGMYQKVESW 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E + ++I L C+ C CC +C + D +LG L + Sbjct: 121 VHTDKKFDPKAQEERMDNALAEQIYELDRCIECGCCVGACGTALMRED-FLGAVALNRLA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+++D RD+ + D + ++ C ++ C CPK + + + K++ + + Sbjct: 180 RFILDPRDQRTEKDYFDIVGTDEGIFGCMGLLACEDVCPKQIPLQEQLGKLRRKMALAAV 239 >gi|189499265|ref|YP_001958735.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium phaeobacteroides BS1] gi|189494706|gb|ACE03254.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlorobium phaeobacteroides BS1] Length = 344 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 12/244 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +RI R+NP P D Y + ++ G VL L YIK +D T++ R C+ GIC Sbjct: 9 RDITFRINRFNPQVDNKPYFDDYTIPVEK-GITVLRALNYIKEHVDATVSFRAFCQAGIC 67 Query: 86 GSCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 GSCGM I+G + LAC + D + + V PL +M +IKDL+VDM + ++ Sbjct: 68 GSCGMRINGISKLACTTQVWDELERCKVENVVKVEPLRNMPLIKDLIVDMDPMVDKMKTY 127 Query: 140 EPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 W++++ P+ E L + E+ Q+ D +C++CA C + C N Y+GPAIL Sbjct: 128 SNWVESIMPEEKMGEKEFLIAEEEFQEYDKATDCILCASCMSECSILRANK-AYVGPAIL 186 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM-LL 255 L+++R +DSRD R+ L ++ C C ++C K + +I ++ LL Sbjct: 187 LKSHRMNVDSRDGAHNVRITELVKDHGVWDCTHCYRCQETCVKNIPIMDSIHGVREDALL 246 Query: 256 DRKI 259 R + Sbjct: 247 TRGV 250 >gi|301095303|ref|XP_002896752.1| succinate dehydrogenase iron-sulfur protein [Phytophthora infestans T30-4] gi|262108635|gb|EEY66687.1| succinate dehydrogenase iron-sulfur protein [Phytophthora infestans T30-4] Length = 182 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 115/199 (57%), Positives = 137/199 (68%), Gaps = 23/199 (11%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117 MVLD L IKN+ DPTL RRSCRE ICGSC MNIDG NTLACV +K + +YPLP Sbjct: 1 MVLDALFKIKNEQDPTLAFRRSCREAICGSCAMNIDGGNTLACVSPIKKNNDVVRIYPLP 60 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 HM V++DL V + LQS EDR+K+DGLYEC++CACCS Sbjct: 61 HMFVVRDLGVGVE-----------------------HLQSFEDRKKLDGLYECILCACCS 97 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 T+CPSYWW D+YLGPA LLQA+RW+ DSRD+ ERL L+D F+LYRCHTIM+CT +C Sbjct: 98 TACPSYWWAQDKYLGPAALLQAFRWIEDSRDDRTEERLRALDDAFKLYRCHTIMSCTHTC 157 Query: 238 PKGLNPAKAIAKIKMMLLD 256 PKGLNPA+AI KI L + Sbjct: 158 PKGLNPAQAIRKIMGRLNE 176 >gi|145592552|ref|YP_001154554.1| succinate dehydrogenase iron-sulfur subunit [Pyrobaculum arsenaticum DSM 13514] gi|145284320|gb|ABP51902.1| succinate dehydrogenase subunit B [Pyrobaculum arsenaticum DSM 13514] Length = 237 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 8/232 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++ R++ Y VD+ + VLD L+ IK + DPTL +R SCR ICGSCG Sbjct: 6 VKVKRFD---GSKTWWQEYKVDISSEKISVLDVLIKIKEEQDPTLAVRYSCRMAICGSCG 62 Query: 90 MNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M I+G LAC + + I V P+ + VIKDLVVD+ + + ++++P++ + Sbjct: 63 MVINGIPRLACQTLISELGDSKIIVEPMWNHKVIKDLVVDLEPDFEKVKAVKPYIICDTK 122 Query: 149 K---PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + E Q E+ +K C+ C C +CP + +R+LGP L AYRW D Sbjct: 123 EIYEKDVEFGQRPEELEKYYNFAYCIQCGLCMAACPVVASH-ERFLGPMALNAAYRWSAD 181 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 SRD+ ER ++ ++ CH C+ CP+G++P +I +K L+ R Sbjct: 182 SRDQGWKERAKIIDREEGVWSCHLAYTCSAVCPRGVDPGFSIQLLKAALIRR 233 >gi|319956813|ref|YP_004168076.1| succinate dehydrogenase subunit b [Nitratifractor salsuginis DSM 16511] gi|319419217|gb|ADV46327.1| succinate dehydrogenase subunit B [Nitratifractor salsuginis DSM 16511] Length = 333 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 8/247 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 +G + +R+N + P TY +++ ++LD L IK + D + + RR Sbjct: 5 KNNSGATRKVTVKAFRFNAETDYLPYYKTYEMEV-GKDELILDLLNRIKWEHDGSFSYRR 63 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD----IKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 SCR GICG+CG+ ++G L+C ++ ++ + P +KD+++D F+ Sbjct: 64 SCRHGICGACGIKVNGKPVLSCKQNAQELVELFGDELVFEPQSKKRAVKDMIIDKGDFWE 123 Query: 135 QHRSIEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +H +++P+++ P P E + + E + C+ C C +CP N D YLGP Sbjct: 124 KHAAVKPYVEAEVDPHPESETIMTPEQVENFLDADYCIQCGACHYACPVIEVNED-YLGP 182 Query: 194 AILLQAYRWLIDSRDEFQGERLD-NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A AYR+ +D RDE +RL+ E ++ C C ++CPK +NP + I K+ Sbjct: 183 AAFAAAYRFTVDPRDEATIDRLETTAELGSGVWDCVKCFECAEACPKDVNPIEKITKLHN 242 Query: 253 MLLDRKI 259 + + + Sbjct: 243 LQFEHHV 249 >gi|15920714|ref|NP_376383.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus tokodaii str. 7] gi|13537506|dbj|BAB40684.1| succinate dehydrogenase complex subunit B [Sulfolobus tokodaii] gi|15621497|dbj|BAB65492.1| 320aa long hypothetical succinate dehydrogenase subunit B [Sulfolobus tokodaii str. 7] Length = 320 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 15/246 (6%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 E+ +I R++P+ Y + +D + L IK++ DPTL R SC Sbjct: 4 QNEEMDVVLKIKRYSPEKGY--WWQEYKLKVDRFTQFT-EALRRIKSEQDPTLAYRASCH 60 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + +KDL+VD+ FY + Sbjct: 61 MAVCGSCGMKINGEPRLACKTLVIDMAKKYGSNVITIEPMDYFKPVKDLIVDLDEFYQRM 120 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CPS + +LGPA Sbjct: 121 YKVKPRLYPHKEVLEGNVEQRLKPEDQRELWKFAQCIWCGLCVSACPSVKMDP-EFLGPA 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-- 252 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 180 AHAKGYRFLADPRDTITEERMKILID--SAWRCTYCYMCYNVCPRDIEPVTAIKKTRAYT 237 Query: 253 MLLDRK 258 L K Sbjct: 238 RLAKEK 243 >gi|313682698|ref|YP_004060436.1| succinate dehydrogenase subunit b [Sulfuricurvum kujiense DSM 16994] gi|313155558|gb|ADR34236.1| succinate dehydrogenase subunit B [Sulfuricurvum kujiense DSM 16994] Length = 325 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 8/242 (3%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + ++++R+N + P +TY +D+ +VLD L IK D +L+ RRSCR G Sbjct: 5 KSQQVTFKVFRFNEETDYLPYYNTYTLDVT-HEEVVLDILNRIKWDHDGSLSYRRSCRHG 63 Query: 84 ICGSCGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ICG C + ++G LAC ++ I + PL IKDL++D F+ H +I Sbjct: 64 ICGVCSIKVNGKGILACKSRLFDLVEVFGNEITIEPLSTKRAIKDLIIDKKDFWDNHAAI 123 Query: 140 EPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +P+ + + PA+E L S D +K+ C+ C C SCP+ N D + GPA Sbjct: 124 KPYLVSEIEEHPAQEHLVSPHDAEKLLEADYCIQCGACHYSCPALEVN-DSFFGPAAFAA 182 Query: 199 AYRWLIDSRDEFQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 AYR+ D RDE +RL + + ++ C M C + CPK +NP + I K+ M+ + Sbjct: 183 AYRFSADVRDEASVDRLHIVNEEAQGVWDCVKCMECAEVCPKEVNPIEKITKLHNMVFEA 242 Query: 258 KI 259 I Sbjct: 243 GI 244 >gi|118576877|ref|YP_876620.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Cenarchaeum symbiosum A] gi|118195398|gb|ABK78316.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Cenarchaeum symbiosum A] Length = 258 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 10/242 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 RI + NP ++ V ++ VLD +L +K +D ++ +R SCR Sbjct: 15 ASPSRSITLRIAKSNPGAGEKREYASFEVPVEK-WTTVLDAILDVKKHLDHSVAVRYSCR 73 Query: 82 EGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 + CGSCGM I+G LAC + + V P+ + VI+DL V + HR ++ Sbjct: 74 QATCGSCGMMINGMPKLACFTKVDELQSAVVTVEPMVNFPVIRDLAVSFGSMFESHRKVK 133 Query: 141 PWLKTVSPKP-------AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 P++ + +E LQS E+ +K C+ C C+++CP+ + GP Sbjct: 134 PYIMDENGDMGAEPVDGERETLQSPEELEKFIQFSGCIKCGLCNSACPTM-TTDSSFTGP 192 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QAYR++ DSRD+ ER +++ ++RCH +C++ CPKG++PA I ++ Sbjct: 193 QALTQAYRYMADSRDKGADERTKEVDESHGVWRCHFAGSCSKVCPKGVDPAMGIQLLRGY 252 Query: 254 LL 255 +L Sbjct: 253 ML 254 >gi|396212|emb|CAA50262.1| unnamed protein product [Thermoplasma acidophilum] Length = 240 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 6/230 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ I R D G TY V D VL+GLLYIK +D +L+ R CR ICGSC Sbjct: 6 EFEIKR--KDQSGKVYYSTYKVPKDK-ISTVLEGLLYIKENLDQSLSFRYPCRMEICGSC 62 Query: 89 GMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GM IDG +AC ++D K I + PL H VI+DLVVD+ F+ ++R ++P++ Sbjct: 63 GMEIDGKPRMACSTIVEDLKKDKIRIEPLRHYKVIRDLVVDIDPFFEKYREVKPYIIRDD 122 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K KEL Q+ E + C+ C C +CP + +YLGPA L A+R++ D+ Sbjct: 123 DGKYDKELPQTPEQFHEYANFAMCIKCGLCMAACP-IEGSDPQYLGPAPLAAAWRYIADN 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD+ R++ ++ RCH CT+ CPKG++P+ AI K++ L Sbjct: 182 RDKGAKYRVEIVDGEEGTSRCHFAGECTEVCPKGVDPSFAIQKLRRTALK 231 >gi|303246224|ref|ZP_07332504.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio fructosovorans JJ] gi|302492287|gb|EFL52159.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio fructosovorans JJ] Length = 251 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP D +P MD + +D + + L I+ ++DPTL CR G Sbjct: 2 GRTLTFNIFRYNPTDEASSPHMDKFQLD-ETERMTLFIALNRIREELDPTLMFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEPW 142 ICG+C M I+G LAC KD+ I + PLP ++ DL VD ++ ++ +E W Sbjct: 61 ICGACAMVINGRPGLACHTKTKDLPDEITLMPLPVFKLVGDLSVDTGTWFRGMYQKVESW 120 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E + ++I L C+ C CC +C + D +LG L + Sbjct: 121 VHTDKVFDPAAQEERMDNGLAERIYELDRCIECGCCVAACGTALMRED-FLGAVALNRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+++D RD+ + + + ++ C ++ C CPK + + + ++ + + Sbjct: 180 RFILDPRDKRTEKQYFEIVGTDEGIFGCMGLLGCEDVCPKEIPLQEQLGHLRRKMALAAV 239 >gi|218245278|ref|YP_002370649.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. PCC 8801] gi|257058311|ref|YP_003136199.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. PCC 8802] gi|218165756|gb|ACK64493.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 8801] gi|256588477|gb|ACU99363.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 8802] Length = 329 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++ R + P +Y ++++ G +L+ L IK + D TL R++CR ICGSC Sbjct: 5 FKVLRQ--KSNHTPHFQSYTLEVE-SGNTILECLNRIKWEQDGTLAFRKNCRNTICGSCS 61 Query: 90 MNIDGTNTLACV-----------KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC I + PL ++ V+KDLVVDMS F+ + + Sbjct: 62 MRINGRSALACKENVGSELQQFSHTQSGELPEITIAPLGNLPVVKDLVVDMSKFWQKLEA 121 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +EP++ T + P +E LQ+ E+R ++D C+MC C + C + +D ++GP L Sbjct: 122 VEPYVSTQARDIPEREFLQTPEERSRLDQTGNCIMCGACYSECNAV-MVNDSFVGPHALA 180 Query: 198 QAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A R ++DSRD RL+ D ++ C C CP + P I +IK +LD Sbjct: 181 KAQRMVVDSRDTELEARLELYNQDTQGVWGCTRCYFCNAVCPMEVAPMDQIGRIKQEILD 240 Query: 257 RK 258 RK Sbjct: 241 RK 242 >gi|194337697|ref|YP_002019491.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pelodictyon phaeoclathratiforme BU-1] gi|194310174|gb|ACF44874.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pelodictyon phaeoclathratiforme BU-1] Length = 344 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 11/248 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 K +R++R+NP D Y + ++ G VL L YIK ID +++ R Sbjct: 7 QHKEGKKDVTFRVFRFNPQVDSKSYFDDYTIPVER-GITVLRSLNYIKEHIDGSVSFRAF 65 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMSHFY 133 C+ GICGSCGM I+G + LAC + D+ I V PL ++ +IKDL+VDM Sbjct: 66 CQAGICGSCGMRINGLSQLACTTQVWDVLAKSREPGVIKVEPLRNLPLIKDLIVDMDPVV 125 Query: 134 SQHRSIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + W+ + P+ E L S ++ + D +C++CA C + C N Y Sbjct: 126 DKMTHYSNWVDSTMPEAQMGKKEFLISEDEFLRYDKATDCILCASCVSECSILRANK-EY 184 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + PA+LL++YR +DSRD RL L ++ C C +SC K + AI I Sbjct: 185 VSPAVLLKSYRMNVDSRDSLHERRLAELVKDHGVWDCTHCYRCQESCVKSIPIMDAIHGI 244 Query: 251 KMMLLDRK 258 + ++ + Sbjct: 245 REDAIESR 252 >gi|217977886|ref|YP_002362033.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocella silvestris BL2] gi|217503262|gb|ACK50671.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylocella silvestris BL2] Length = 258 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 5/234 (2%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 P + + E R+ R+ P + P TY++ + VL L +K +D TL+ R SC Sbjct: 9 PVDKPKIVELRVLRYRPASDTEPVFMTYHLPFTD-DMSVLQALQAVKVSLDATLSFRWSC 67 Query: 81 REGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 R +CGSCGM I+G LAC ++D + + PL + + +DL+V + F + SI Sbjct: 68 RMAVCGSCGMMINGEPKLACSTFLRDLASEPVTLEPLHNFPIERDLIVTVGDFVKKIESI 127 Query: 140 EPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 P++ +PK ++ LQ+ +C+ C C +CP + N D ++GP + Sbjct: 128 YPYIMPKAPKTIEDGAYLQTPGQMAAYGSFADCINCMLCYAACPQFGANPD-FIGPGAMA 186 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ DSRD Q RL+ + ++ C + C+ CPK ++PA A+ + K Sbjct: 187 LLQRYNGDSRDGGQQLRLEQISGEDGVWSCTAVGVCSDVCPKQVDPANAVNQNK 240 >gi|13541577|ref|NP_111265.1| succinate dehydrogenase iron-sulfur subunit [Thermoplasma volcanium GSS1] gi|14324973|dbj|BAB59899.1| succinate dehydrogenase iron sulfur subunit [Thermoplasma volcanium GSS1] Length = 240 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 83/230 (36%), Positives = 121/230 (52%), Gaps = 6/230 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ I R D G Y V D VL+GLLYIK +D TL+ R SCR ICGSC Sbjct: 6 EFEIKR--KDGSGKTYFQKYNVPKDK-VSTVLEGLLYIKENLDQTLSFRYSCRMEICGSC 62 Query: 89 GMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 GM I G +AC ++D I + PL H VI+DLVVD+ F+ +++ ++P++ Sbjct: 63 GMEIQGKPRMACSTIIEDLKSDKIRIEPLKHYKVIRDLVVDIDPFFDKYKEVKPYVIRDD 122 Query: 148 PKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L Q+ E + C+ C C +CP + YLGPA L A+R++ D+ Sbjct: 123 DGKYDKELSQTPEQFHEYANYAMCIKCGLCMAACPIEGSDPS-YLGPAPLAAAWRYIADN 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD+ R++ ++ RCH CT+ CPKG+NP+ AI K++ L Sbjct: 182 RDKGAKYRVEVVDGENGTARCHFAGECTEVCPKGVNPSFAIQKLRKTALK 231 >gi|78221532|ref|YP_383279.1| succinate dehydrogenase subunit B [Geobacter metallireducens GS-15] gi|78192787|gb|ABB30554.1| succinate dehydrogenase subunit B [Geobacter metallireducens GS-15] Length = 344 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 10/244 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+ +RIYR+NP P D + + ++ G +L L +IK ++P LT R C+ G Sbjct: 2 ERREVSFRIYRYNPQVDRTPFYDNFRIAVEK-GITILRALNHIKEHLEPRLTFRAFCQAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 ICGSC + I+G + LAC + D + I + PL ++ VI+DLVVD+ + + Sbjct: 61 ICGSCAVRINGVSKLACTTQVWDELGGDGEHTILIEPLNNLEVIRDLVVDIDPIMDKLKE 120 Query: 139 IEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 W+K P+ E L S + + I+ +C++C C + C N Y+ P + Sbjct: 121 NYSWVKPAIPQEEMGRKEHLVSDGEFEAINAASDCILCGSCYSECSMMEVN-RSYISPPV 179 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L++A+R DSRD ERL+ + L+ C C + C K + I +++ Sbjct: 180 LVKAFRMNNDSRDTLACERLERVSSDHGLWDCAHCHKCMEHCTKNIPIMDGIHRLREEAF 239 Query: 256 DRKI 259 +R + Sbjct: 240 ERGM 243 >gi|119489261|ref|ZP_01622068.1| succinate dehydrogenase [Lyngbya sp. PCC 8106] gi|119454735|gb|EAW35880.1| succinate dehydrogenase [Lyngbya sp. PCC 8106] Length = 337 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 25/252 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++I R +P + TY ++++ G +L+ L IK ++D TL R++CR ICGS Sbjct: 3 VQFKIIRQT--QDSSPRIQTYKLEVE-PGNTILECLNRIKWELDGTLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKDMK-------------------DIKGAIAVYPLPHMSVIKDLVVD 128 CGM I+G + LAC +++ + I + P+ +M VIKDLVVD Sbjct: 60 CGMRINGRSALACKENITSELARLEQIAASSSAPTASNGIPEITIAPMGNMPVIKDLVVD 119 Query: 129 MSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 M F+ +EP++ T S P +E LQ+ E+R K++ + C++C C + C + N Sbjct: 120 MKRFWGNLEKVEPYVSTQSRDIPEREFLQTPEERAKLNQMGNCILCGACYSECNALEVNP 179 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + GP L +A R + D+RD+ +RL++ ++ C NC +CP + P Sbjct: 180 -EFAGPHALAKAQRMIADNRDDHTEDRLEHYNQGTEGVWGCTRCFNCNTACPMEVAPMDQ 238 Query: 247 IAKIKMMLLDRK 258 I KIK +L+RK Sbjct: 239 ITKIKHEILERK 250 >gi|152992792|ref|YP_001358513.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Sulfurovum sp. NBC37-1] gi|151424653|dbj|BAF72156.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Sulfurovum sp. NBC37-1] Length = 329 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 8/243 (3%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + + +R+N + P Y +++ ++LD L IK + D + + RRSCR Sbjct: 2 SDTRKVTIKAFRFNAETDYLPYYKEYEMEV-GKDELILDLLNRIKWEHDGSFSYRRSCRH 60 Query: 83 GICGSCGMNIDGTNTLACVKDM----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 GICG+C + ++G TLAC ++ + P V+KD+++D F+ +H + Sbjct: 61 GICGACAIKVNGRATLACKQNAIELLDLFNNELVFEPSSKKRVVKDMIIDKKDFWDKHAA 120 Query: 139 IEPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ P P E QS + K C+ C C SCP+ N D YLGPA L Sbjct: 121 VQPYVVADIDPHPEHETKQSIAEFNKFLDSDLCIQCGACHYSCPALEANPD-YLGPAALN 179 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 AYR+ +D+RD ERL+ +P ++ C C ++CPK +NP + I K+ M + Sbjct: 180 AAYRFTVDTRDHAGKERLELTAEPGVGVWDCVKCFECAEACPKDINPIEKITKLHNMQFE 239 Query: 257 RKI 259 + + Sbjct: 240 QHV 242 >gi|166364108|ref|YP_001656381.1| succinate dehydrogenase iron-sulfur subunit [Microcystis aeruginosa NIES-843] gi|166086481|dbj|BAG01189.1| succinate dehydrogenase iron-sulphur protein subunit [Microcystis aeruginosa NIES-843] Length = 327 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 17/244 (6%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++I R P P ++ + ++++ G +LD L IK ++D TL R++CR ICGS Sbjct: 3 VSFKILRQRP--NDTPYLENFTLEVEA-GNTILDCLNRIKWELDGTLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVK-----------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 C M I+G + LAC K I + PL ++ +I+DL+V+M F+ Sbjct: 60 CAMKINGRSALACQKNIASELNHCSQKDAGEIPEITIAPLGNLPIIRDLIVNMQPFWDDL 119 Query: 137 RSIEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +EP+ P +E LQ+ E+R ++ + C+MC C + C + N D ++GP Sbjct: 120 EKVEPYISSQARTIPEREFLQTPEERANLNQMGNCIMCGACYSECNAKQVNPD-FVGPHA 178 Query: 196 LLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +A R L DSRD Q RL+ ++ C C CP + P I+KIK + Sbjct: 179 LAKAQRTLADSRDGNQESRLELYNQGTAGVWGCTRCYFCNAVCPMEVAPMDQISKIKQEI 238 Query: 255 LDRK 258 L RK Sbjct: 239 LARK 242 >gi|113477194|ref|YP_723255.1| succinate dehydrogenase iron-sulfur subunit [Trichodesmium erythraeum IMS101] gi|110168242|gb|ABG52782.1| succinate dehydrogenase subunit B [Trichodesmium erythraeum IMS101] Length = 346 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 29/256 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R N P + +Y ++++ G +L+ L IK + D +L R++CR ICGS Sbjct: 3 VNFNIVRQN--QNTQPKIQSYTLEIE-PGNTILECLNRIKWEQDGSLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKDMKDI-----------------------KGAIAVYPLPHMSVIKD 124 C M I+G + LAC +++++ I + P+ +M VIKD Sbjct: 60 CAMRINGRSALACKENIRNELARLEKIATNNHHDYVTNTTVKSIPEITISPMGNMPVIKD 119 Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VDM+ F+ +++P++ T + K P +E LQ+ +R K++ C++C C + C + Sbjct: 120 LIVDMNSFWQNLEAVQPYVSTEARKIPEREFLQTPSERDKLNQTGNCILCGACYSECNAR 179 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLN 242 N D ++GP L +AYR + DSRD ERL+ D ++ C C CP ++ Sbjct: 180 EVNPD-FVGPHALGKAYRMIADSRDNQTTERLEKYNLDTAGVWGCTRCYYCNSVCPMEVS 238 Query: 243 PAKAIAKIKMMLLDRK 258 P I KIK +L RK Sbjct: 239 PMDQIGKIKQEVLARK 254 >gi|218887548|ref|YP_002436869.1| fumarate reductase iron-sulfur subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758502|gb|ACL09401.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 247 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 7/234 (2%) Query: 26 NLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + I+R NP + + P MDTY +D + + L ++ + DP+L CR G+ Sbjct: 3 RSLTFNIFRHNPQDPASVPHMDTYRLD-ETDSMTLFIALHRLREEQDPSLKFDFCCRAGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPWL 143 CGSC M I+G LAC +D+ I + PLP ++ DL VD + F + ++ E W+ Sbjct: 62 CGSCAMVINGRPGLACHTKTRDLPATITLLPLPVFKLVGDLAVDTGTWFRAMYQRTESWI 121 Query: 144 KT--VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 T A+E +E I L C+ C CC +C + D +L PA ++ R Sbjct: 122 HTRAEFEPAAQEARMENEVANAIYELDRCIECGCCVAACGTANLRPD-FLAPAGFIRVAR 180 Query: 202 WLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D RDE + + + ++ C ++ C CPK L + ++ + Sbjct: 181 FAADPRDERTDADFYEIIGSDEGIFGCMGLLACEDVCPKHLPLQNQLGYLRRKM 234 >gi|282898683|ref|ZP_06306671.1| Succinate dehydrogenase/fumarate reductase iron- sulfur protein [Cylindrospermopsis raciborskii CS-505] gi|281196551|gb|EFA71460.1| Succinate dehydrogenase/fumarate reductase iron- sulfur protein [Cylindrospermopsis raciborskii CS-505] Length = 364 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 25/264 (9%) Query: 16 KIWNAPTGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 + + TG + +I R P P + +Y + +D G +LD L IK + D TL Sbjct: 17 RFFKNKTGALYMEVILQIIRQQP--NSTPVVQSYNLQVD-PGNTILDCLNRIKWEQDGTL 73 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKD------------------MKDIKGAIAVYPL 116 R++CR ICGSC M I+G + LAC ++ +I V PL Sbjct: 74 AFRKNCRNTICGSCAMVINGRSALACKENVGSELARLTNISASVYPVDHHTINSITVAPL 133 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCAC 175 +M VIKDLVVDM+ F+ ++ P++ T + + P +E LQ+ ++R +D C+MC Sbjct: 134 GNMPVIKDLVVDMTSFWDNLEAVTPYISTAARQIPEREFLQTPQERSLLDQTGNCIMCGA 193 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C + C + N D ++GP L +AYR + DSRD+ Q RL+ ++ C C Sbjct: 194 CYSECNARQVNPD-FVGPHALAKAYRMVADSRDDNQENRLEEYNHTTQGVWGCTRCFYCD 252 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRK 258 CP G+ P I KIK +L+RK Sbjct: 253 SVCPMGVEPLAQINKIKQKILERK 276 >gi|193213882|ref|YP_001995081.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] gi|193087359|gb|ACF12634.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] Length = 339 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 11/246 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 EK +R+YR+NP +P D Y + ++ G VL L YIK I+P L+ R C+ Sbjct: 7 KEEKREITFRVYRFNPQIDASPFYDEYPITVEK-GITVLRALNYIKEHIEPRLSFRSFCQ 65 Query: 82 EGICGSCGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 GICGSC M I+ + LAC + D + I V P+ ++ VI+DLVVDM + Sbjct: 66 AGICGSCAMRINSVSKLACTTQVWDELAFADRENVILVEPIANLPVIRDLVVDMDSVVGK 125 Query: 136 HRSIEPWLKTVSPKPAKELLQSH---EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 W+++ P+ + + + + D +C++CA C + C N Y+ Sbjct: 126 IEKYFGWVESKMPENQMGKKEFNIAEAEFKLYDAATDCILCASCISECTMTKANK-EYIT 184 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA+LL++YR DSRD +RL L ++ C C + C K + +AI I+ Sbjct: 185 PAVLLKSYRMEADSRDAVHDKRLGVLVSDNGVWDCTHCYRCMEHCVKHIPIMEAIHHIRE 244 Query: 253 MLLDRK 258 + ++ Sbjct: 245 DAVQKR 250 >gi|258544491|ref|ZP_05704725.1| fumarate reductase, iron-sulfur protein [Cardiobacterium hominis ATCC 15826] gi|258520226|gb|EEV89085.1| fumarate reductase, iron-sulfur protein [Cardiobacterium hominis ATCC 15826] Length = 249 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 6/235 (2%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N + R+ PD P + ++ +LD L +K DPT+ R SCR + Sbjct: 2 SNKIRINLMRYRPDEDEKPWAQPFEIEWTQ-DMSILDALDLLKGDFDPTIAYRWSCRMEV 60 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSCGM ++G LAC +++ I + L + KDLVVD+ F ++ ++ P+ Sbjct: 61 CGSCGMVVNGEPRLACSTFVREFADVGEITIGALDQFPIEKDLVVDLDPFINKLNAVSPF 120 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T +P+ KE LQ+ + K C+ C C +CP N+D +LGPA + A Sbjct: 121 IITKNPRALAEKEYLQTPQQLAKFKQYTMCINCMLCYQACPQIGINAD-FLGPAAIALAQ 179 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +D+RD+ +R L D ++ C + C+ CPK ++PA AI + K + Sbjct: 180 RYNLDNRDQGDKQRFSALNDENGVWPCTFVGACSNVCPKHVDPAGAIQQAKAAAV 234 >gi|22299297|ref|NP_682544.1| succinate dehydrogenase iron-sulfur subunit [Thermosynechococcus elongatus BP-1] gi|22295480|dbj|BAC09306.1| succinate dehydrogenase iron-sulphur protein subunit [Thermosynechococcus elongatus BP-1] Length = 338 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 12/239 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + RI R PD T+ +++D +LD L+ IK D +L+ R++CR ICG Sbjct: 2 TIQLRIRRQGPDKNA--YWQTFELEIDPS-LTILDALIQIKESQDGSLSCRKNCRNTICG 58 Query: 87 SCGMNIDGTNTLACVKD------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 SC M I+G + LAC + + IA+ PL ++ V+KDLVVDMS F+ + ++ Sbjct: 59 SCAMTINGRSALACQQSILAELANSPVPNQIAIAPLGNLPVLKDLVVDMSDFWQKLSAVN 118 Query: 141 PWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P++ T + + P +E LQS DR K++ C++C C +C + N ++GP L +A Sbjct: 119 PYVSTAARQVPEREFLQSPSDRAKLNASGNCILCGACYGACNAVEVNP-AFVGPHALAKA 177 Query: 200 YRWLIDSRDEFQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R + D+RD +RLD ++ C NC CP G+ P I++IK +L R Sbjct: 178 ARLVADTRDSDTDQRLDQYNTATSGVWGCTRCFNCNTVCPVGVQPLDRISEIKQAILAR 236 >gi|159028214|emb|CAO88024.1| sdhB [Microcystis aeruginosa PCC 7806] Length = 327 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 17/244 (6%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++I R P P ++ + ++++ G +LD L IK ++D TL R++CR ICGS Sbjct: 3 VSFKILRQRP--NDTPYLENFTLEVEA-GNTILDCLNRIKWELDGTLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVK-----------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 C M I+G + LAC + I + PL ++ +I+DL+V+M F+ Sbjct: 60 CAMKINGRSALACQQNIASELNHCSQKDAGEIPEITIAPLGNLLIIRDLIVNMQPFWDDL 119 Query: 137 RSIEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +EP+ P +E LQ+ E+R ++ + C+MC C + C + N D ++GP Sbjct: 120 EKVEPYISSQARTIPEREFLQTPEERANLNQMGNCIMCGACYSECNAKQVNPD-FVGPHA 178 Query: 196 LLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +A R L DSRD Q RL+ + ++ C C CP + P I KIK + Sbjct: 179 LAKAQRTLADSRDGNQESRLELYHQGTAGVWGCTRCYFCNAVCPMEVAPMDQIGKIKQEI 238 Query: 255 LDRK 258 L RK Sbjct: 239 LARK 242 >gi|319790245|ref|YP_004151878.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermovibrio ammonificans HB-1] gi|317114747|gb|ADU97237.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermovibrio ammonificans HB-1] Length = 321 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 12/245 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 EK +RI R+NP P + V + G VL+ L IK+ +DPTL R CR Sbjct: 2 EKREVTFRIKRFNPKKDKEPYYQEFKVTV-YKGMTVLEVLQTIKDTLDPTLAFRAFCRSA 60 Query: 84 ICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 ICGSC + ++G LAC K + + P+ +M VI+DL+VD + + ++ Sbjct: 61 ICGSCAVRVNGFPKLACKTQVFNELDKFQTDTLTIEPIGNMEVIRDLIVDWTPSIEKMKA 120 Query: 139 IEPWLKTV----SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P+L P P +E E+ +K D +C++C C ++CP D Y GP Sbjct: 121 MKPYLIPDPEVVPPTPDEESKVYPEELKKFDKFTDCILCTSCYSACPMVEL-DDNYGGPF 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L + YR+ +D RD + ER + + ++ C C CPK + P I K++ + Sbjct: 180 PLARVYRFAVDPRDALKKER-AKIGFAYDMWNCVRCQMCADVCPKHVGPVDGIMKLRGLS 238 Query: 255 LDRKI 259 ++ + Sbjct: 239 IEAGM 243 >gi|209527764|ref|ZP_03276258.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arthrospira maxima CS-328] gi|209491797|gb|EDZ92158.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arthrospira maxima CS-328] Length = 338 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 25/252 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I R P + +Y +D+D +LD L IK ++D TL R++CR ICGS Sbjct: 3 VQFNIIRQT--ASSAPQVQSYQLDVD-PATTILDSLNRIKWELDGTLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKDMK-------------------DIKGAIAVYPLPHMSVIKDLVVD 128 C M I+G LAC +++ D + + P+ +M VIKDLVVD Sbjct: 60 CSMRINGRAALACKENVASEVKRLQDIAAANSSYTGGDEIPVLTIAPMGNMPVIKDLVVD 119 Query: 129 MSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 M+ F+ ++EP++ T + K P +E LQ+ E+R+ ++ C++C C + C + N Sbjct: 120 MTQFWDNLEAVEPYVSTQARKIPEREFLQTPEERESLNQNGNCILCGACYSECNAKEVNP 179 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 ++GP L +A R + DSRD ERL+ D ++ C NC CP + P Sbjct: 180 -AFVGPHALAKAQRMVADSRDARTEERLEQYNQDIQGVWGCTRCYNCNTVCPMEVAPMDQ 238 Query: 247 IAKIKMMLLDRK 258 I KIK +L+RK Sbjct: 239 IGKIKHEILERK 250 >gi|291571432|dbj|BAI93704.1| putative succinate dehydrogenase iron-sulfur protein [Arthrospira platensis NIES-39] Length = 338 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 25/252 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I R P + +Y +D+D +LD L IK ++D TL R++CR ICGS Sbjct: 3 VQFNIIRQT--ASSAPQVQSYQLDVD-PATTILDSLNRIKWELDGTLAFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKDMK-------------------DIKGAIAVYPLPHMSVIKDLVVD 128 C M I+G LAC +++ D + + P+ +M VIKDLVVD Sbjct: 60 CSMRINGRAALACKENVASEVKRLQDIAAANSSYTGGDEIPVLTIAPMGNMPVIKDLVVD 119 Query: 129 MSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 M+ F+ ++EP++ T + K P +E LQ+ E+R+ ++ C++C C + C + N Sbjct: 120 MTQFWDNLEAVEPYVSTQARKIPEREFLQTPEERESLNQNGNCILCGACYSECNAKEVNP 179 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 ++GP L +A R + DSRD ERL+ D ++ C NC CP + P Sbjct: 180 -TFVGPHALAKAQRMVADSRDARTEERLEQYNQDIQGVWGCTRCYNCNTVCPMEVAPMDQ 238 Query: 247 IAKIKMMLLDRK 258 I KIK +L+RK Sbjct: 239 IGKIKHEILERK 250 >gi|223935224|ref|ZP_03627142.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [bacterium Ellin514] gi|223896108|gb|EEF62551.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [bacterium Ellin514] Length = 248 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 3/227 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++R+ P++ P + + V++ +LD L + P L R SCR G+CGS Sbjct: 4 VTLKVHRFTPESDKAPHFEEHRVEV-GERASILDALFAAQRGDAPDLAFRFSCRVGMCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C M ++G L C +K + + + PL ++ V++DL D+ F++ ++ P L Sbjct: 63 CAMVVNGRERLTCSTLVKSVGTELKIEPLRNLPVVRDLATDLQPFFNAYQRSLPHLVAKE 122 Query: 148 P-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K + + + + +D +C+ CA C ++C + YLGP L +A ++D Sbjct: 123 GLKDFAVIPEDSAEGKALDRQPQCIDCASCYSACSLVTLHPR-YLGPMALHRALNLIVDP 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RD + ER+D + +RCHT+ NC CP+G++P +I ++K + Sbjct: 182 RDAAREERMDIIGGEAGAFRCHTLGNCRDVCPRGISPTASIERLKRL 228 >gi|307151434|ref|YP_003886818.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 7822] gi|306981662|gb|ADN13543.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 7822] Length = 330 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 17/241 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++ R PD + +Y +D++ G +LD L IK + D TL R++CR ICGSCG Sbjct: 5 FKVLRQKPD--STVRVQSYTLDVE-PGNTILDCLNRIKWEQDGTLAFRKNCRNTICGSCG 61 Query: 90 MNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC ++ I + P+ +M VIKDL+VDM+ F++ + Sbjct: 62 MRINGRSALACKQNVGQELELFASTTNGGIPEITIAPMGNMPVIKDLIVDMNSFWNSLEA 121 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ T + P +E LQ+ E+R+++D + C++C C + C + N ++GP L Sbjct: 122 VDPYVSTNARSIPEREFLQTPEERERLDQMGNCILCGACYSECNARDVNP-EFVGPHALA 180 Query: 198 QAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A+R +ID+RD RL+ ++ C C CP + P I KIK +L Sbjct: 181 KAHRMVIDNRDSETESRLEKYNTAKEGVWGCTRCYMCNTVCPMEVAPMDQIGKIKQEILR 240 Query: 257 R 257 R Sbjct: 241 R 241 >gi|323698234|ref|ZP_08110146.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio sp. ND132] gi|323458166|gb|EGB14031.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio desulfuricans ND132] Length = 245 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 L ++ I+R+NP++ +P M + ++ + + L I+ + DP+L CR G Sbjct: 2 SRLLKFNIFRYNPEDGQSSPHMQEFVLE-ETDAMTLFIALNRIREEQDPSLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPW 142 ICGSCGM I+G LAC +D+ G I + PLP ++ DL VD + F + E W Sbjct: 61 ICGSCGMVINGRPGLACHTKTRDLPGEITLLPLPVFKLVGDLSVDTGTWFREMYDKTESW 120 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A E ++D I L CV C CC +C + D ++G A L + Sbjct: 121 IHTNKVFDPTALEERMDNKDAVAIYELERCVECGCCIAACGTARLRED-FMGAAALNRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+LID RD+ + + + + ++ C ++ C CPK L + ++ + Sbjct: 180 RFLIDPRDQRTENDYYEIIGNDMGIFGCMGLLACEDVCPKHLPLQNQLGFLRRKM 234 >gi|225849917|ref|YP_002730151.1| fumarate reductase, iron-sulfur subunit [Persephonella marina EX-H1] gi|225644790|gb|ACO02976.1| fumarate reductase, iron-sulfur subunit [Persephonella marina EX-H1] Length = 354 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 80/237 (33%), Positives = 122/237 (51%), Gaps = 9/237 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + RI+R++P NP TY + ++ G VL L K + DP+++ R +CR ICGSC Sbjct: 5 KLRIFRYDPTKDTNPYYKTYELPVEK-GMTVLAALFKAKEEQDPSISFRYNCRAAICGSC 63 Query: 89 GMNIDGTNTLAC-----VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 + I+G TLAC K I V P+ ++ +KDL+ DM + + I+PW Sbjct: 64 AVRINGHATLACKVQVTHILQKYETDTITVDPIGNVRPLKDLIYDMDWLVDKLKRIKPWF 123 Query: 144 KTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 P P+ E Q D +ID +C++CA C + C + N D Y GP +L +AYR Sbjct: 124 IPKEPPPSDGTEYRQDPYDHHRIDFASDCILCASCMSDCNALKANKD-YHGPMVLSKAYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D+RD + ERLD + D L C CT CPK + P + I ++++M + Sbjct: 183 FAADTRDGAKEERLDAVLDDLNLEWCVRCWECTTRCPKEVQPFENIIRLRIMAAEEG 239 >gi|317153770|ref|YP_004121818.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio aespoeensis Aspo-2] gi|316944021|gb|ADU63072.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio aespoeensis Aspo-2] Length = 245 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 L ++ I+R+NP++ +P M+ + ++ + + L I+ + DP+L CR G Sbjct: 2 SRLLKFNIFRYNPEDALSSPHMEEFVLE-ETDSMTLFIALNRIREEQDPSLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPW 142 ICGSCGM I+G LAC KD+ G I + PLP ++ DL VD S F + E W Sbjct: 61 ICGSCGMVINGRPGLACHTKTKDLSGEITLLPLPVFKLVGDLSVDTGSWFREMYTKTESW 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A E ++ I L CV C CC ++C + D +LG A L + Sbjct: 121 IHTDKEFDPAALEERMDNKVAVGIYELERCVECGCCISACGTARLRED-FLGAAALNRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+LID RD+ + + + + ++ C ++ C CPK L + ++ + Sbjct: 180 RFLIDPRDQRTDADYYEIIGNDMGIFGCMGLLACEDVCPKHLPLQNQLGFLRRKM 234 >gi|284051913|ref|ZP_06382123.1| succinate dehydrogenase iron-sulfur subunit [Arthrospira platensis str. Paraca] Length = 360 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 25/252 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I R P + +Y +D+D +LD L IK ++D TL R++CR ICGS Sbjct: 25 VQFNIIRQT--ASSAPQVQSYQLDVD-PATTILDSLNRIKWELDGTLAFRKNCRNTICGS 81 Query: 88 CGMNIDGTNTLACVKDMK-------------------DIKGAIAVYPLPHMSVIKDLVVD 128 C M I+G LAC +++ D + + P+ +M VIKDLVVD Sbjct: 82 CSMRINGRAALACKENVASEVKRLQDIAAANSSYTGGDEIPVLTIAPMGNMPVIKDLVVD 141 Query: 129 MSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 M+ F+ ++EP++ T + K P +E LQ+ E+R+ ++ C++C C + C + N Sbjct: 142 MTQFWDNLEAVEPYVSTQARKIPEREFLQTPEERESLNQNGNCILCGACYSECNAKEVNP 201 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 ++GP L +A R + DSRD ERL+ D ++ C NC CP + P Sbjct: 202 -TFVGPHALAKAQRMVADSRDARTEERLEQYNQDIQGVWGCTRCYNCNTVCPMEVAPMDQ 260 Query: 247 IAKIKMMLLDRK 258 I KIK +L+RK Sbjct: 261 IGKIKHEILERK 272 >gi|148681384|gb|EDL13331.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_a [Mus musculus] Length = 262 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 108/180 (60%), Positives = 137/180 (76%), Gaps = 4/180 (2%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+Q Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQVR 218 >gi|16330363|ref|NP_441091.1| succinate dehydrogenase iron-sulfur subunit [Synechocystis sp. PCC 6803] gi|1652853|dbj|BAA17771.1| succinate dehydrogenase iron-sulphur protein subunit [Synechocystis sp. PCC 6803] Length = 331 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 17/244 (6%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++I R P P ++ + ++++ G +L+ L IK + D +L R++CR ICGS Sbjct: 3 VQFQILRQKPQQS--PYLEKFDLEVE-PGATILECLNQIKWEQDGSLNFRKNCRNTICGS 59 Query: 88 CGMNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 C M ++G + LAC ++ + + V PL ++ VIKDL+VDM F+ Sbjct: 60 CSMRVNGRSALACKENVGSETRLFTQVNEAGIPVVTVAPLGNLPVIKDLIVDMQPFWDDL 119 Query: 137 RSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +EP++ T K P +E LQ+ +R+K++ + C++C C + C + N D ++GP Sbjct: 120 ERVEPYVSTQGRKVPEREFLQTPAEREKLNQMGNCILCGACYSECNAKSVNPD-FVGPHA 178 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +A R L DSRD +RL++ + + C C + CP + P I KIK L Sbjct: 179 LAKAQRLLTDSRDGATADRLESYNNATAGAWGCTRCYLCNEVCPMEVAPMDQIGKIKSAL 238 Query: 255 LDRK 258 L +K Sbjct: 239 LAQK 242 >gi|224029765|gb|ACN33958.1| unknown [Zea mays] Length = 350 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 111/187 (59%), Positives = 134/187 (71%), Gaps = 3/187 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 G + K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT R Sbjct: 40 PEAKGASSTKTFSIYRWDPDSPSTKPHLRDYQVDLSDCGPMVLDALLKIKNEQDPSLTFR 99 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 RSCREGICGSC MNIDG N LAC+ + A V PLPHM VIKDLVVDM++FY+Q++ Sbjct: 100 RSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYK 159 Query: 138 SIEPWLKTVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 S+EPWLK P P KE+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA Sbjct: 160 SVEPWLKRKDPPPQLGKEVPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAA 219 Query: 196 LLQAYRW 202 LL A R Sbjct: 220 LLHANRL 226 >gi|289612768|emb|CBI60026.1| unnamed protein product [Sordaria macrospora] Length = 155 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 86/155 (55%), Positives = 115/155 (74%), Gaps = 1/155 (0%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E LPK SR+ +G +PT +K++++YR++PD+ NP D + +DLD CGPMVL Sbjct: 1 MAEFRLPKNSRITKGATHKSPTS-GRIKKFKVYRYDPDSGQNPRYDDFEIDLDECGPMVL 59 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS 120 D L+ +K++ DP+LT RRSCREGICGSC MNIDG N LAC ++DIKG I + PLPHM Sbjct: 60 DALIKMKSEQDPSLTFRRSCREGICGSCSMNIDGRNGLACTTAIEDIKGDIRITPLPHMD 119 Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 VIKDLV D +HFY+Q+ SI+PWL+TV+P+PA + Sbjct: 120 VIKDLVPDFTHFYAQYASIKPWLQTVTPEPAGKER 154 >gi|153871913|ref|ZP_02000959.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Beggiatoa sp. PS] gi|152071620|gb|EDN69040.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Beggiatoa sp. PS] Length = 341 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 12/248 (4%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 P EK L RI R+ PD +P D + ++++ G +L+ L +IKN D TLT R C Sbjct: 7 PKREKILANIRIQRYTPDKDRSPYFDNFKMEVE-TGMTILEALRHIKNTQDSTLTFRAFC 65 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-----IAVYPLPHMSVIKDLVVDMSHFYSQ 135 R ICGSC + ++G LAC + I + + P+ ++ +I+DLVVD+ + Sbjct: 66 RSAICGSCTVRVNGNPVLACSTQLMPILKDFGKKSVTIAPMANLPIIRDLVVDIDPVIDK 125 Query: 136 HRSIEPWLKTVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + P+L + + E S E+ + +C++C C ++C + + Y Sbjct: 126 LAKMHPYLMENRERIPESLAEESRMSQEELALFNYATDCILCGACFSACSTVKADPS-YA 184 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GP + +AYR+ +D RD F+G R+ D L+ C C + CPK + PA +I ++ Sbjct: 185 GPVTIAKAYRFSVDVRDSFRGMRIQAAMDQ-GLWSCVQCRKCIKVCPKDIRPADSIRDMR 243 Query: 252 MMLLDRKI 259 + +D I Sbjct: 244 RIAIDDGI 251 >gi|300867664|ref|ZP_07112309.1| succinate dehydrogenase iron-sulfur subunit [Oscillatoria sp. PCC 6506] gi|300334247|emb|CBN57481.1| succinate dehydrogenase iron-sulfur subunit [Oscillatoria sp. PCC 6506] Length = 335 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 84/250 (33%), Positives = 126/250 (50%), Gaps = 25/250 (10%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R P TY +D + G VLD L IK + D TL R++CR ICGSC Sbjct: 5 FKITRQT--QNSAPEFQTYTIDAE-PGNTVLDCLNRIKWEQDGTLAFRKNCRNTICGSCS 61 Query: 90 MNIDGTNTLACVKD-------------------MKDIKGAIAVYPLPHMSVIKDLVVDMS 130 M I+G + LAC ++ D I + P+ +M VIKDLVVDM+ Sbjct: 62 MRINGRSALACKENIGSEVKRLQEIAKANSAQTPTDSIPEITIAPMGNMPVIKDLVVDMT 121 Query: 131 HFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F++ ++EP++ T + K P +E LQ+ E+R+K++ C++C C + C + N Sbjct: 122 SFWNNLEAVEPYVSTEARKIPEREFLQTPEEREKLNQTGNCILCGACYSECNAREVNP-E 180 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++GP L +AYR + D+RD RL+ ++ C C CP + P I Sbjct: 181 FVGPHALAKAYRMVADNRDSDTENRLEKYNQGTVGVWGCTRCYYCNSVCPMDVAPMDQIG 240 Query: 249 KIKMMLLDRK 258 KIK +LDRK Sbjct: 241 KIKQDILDRK 250 >gi|15899115|ref|NP_343720.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus solfataricus P2] gi|284173770|ref|ZP_06387739.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus solfataricus 98/2] gi|13815660|gb|AAK42510.1| Succinate dehydrogenase subunit B (sdhB) [Sulfolobus solfataricus P2] gi|261600864|gb|ACX90467.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus solfataricus 98/2] Length = 316 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPEKGY--WWAEYKLKVDRFTQFT-EALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVVKKYNNNVITIEPMDYFKPIKDLIVDWDEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 I+P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKIKPRLYQAKEVLEGKAEHRLKPEDQRELWKFAQCIWCGLCVSACPAV-VIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTR 233 >gi|70606765|ref|YP_255635.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus acidocaldarius DSM 639] gi|68567413|gb|AAY80342.1| succinate dehydrogenase subunit B [Sulfolobus acidocaldarius DSM 639] Length = 317 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 E+ ++ R+ + Y + +D + L IK++ DPTL R SC Sbjct: 4 KNEEAEVIIKVKRYTQEKGF--YWQEYKLKVDRFTQFT-EALRRIKSEQDPTLAYRASCH 60 Query: 82 EGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + +KDLVVD+ FY++ Sbjct: 61 MAVCGSCGMKINGEPKLACKTLVLDVIKKYGSNVITIEPMDYFKPVKDLVVDLDDFYNRM 120 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++ + +C+ C C ++CP+ + +LGPA Sbjct: 121 HKVKPRLYPSNEVLEGKAEHRLKPEDQKVLWKFAQCIWCGLCVSACPAVQEDP-EFLGPA 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+L D RD ERL L D +RC C CP+ + P AI K + Sbjct: 180 AHAKGFRFLADPRDTITEERLKILID--SAWRCTYCYMCYNVCPRDIEPVTAIKKTR 234 >gi|149024455|gb|EDL80952.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_b [Rattus norvegicus] Length = 227 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 112/186 (60%), Positives = 140/186 (75%), Gaps = 4/186 (2%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 39 PRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + G + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 LK + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+Q Sbjct: 159 LKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQVG 218 Query: 201 RWLIDS 206 + DS Sbjct: 219 VPVSDS 224 >gi|282897923|ref|ZP_06305918.1| Succinate dehydrogenase/fumarate reductase iron- sulfur protein [Raphidiopsis brookii D9] gi|281197067|gb|EFA71968.1| Succinate dehydrogenase/fumarate reductase iron- sulfur protein [Raphidiopsis brookii D9] Length = 350 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 25/262 (9%) Query: 18 WNAPTGEKNLKEY-RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 + TG ++ I R P P +++Y + +D G +LD L IK + D TL Sbjct: 7 FKNKTGALYMEIILHITRQQP--NSTPVVESYNLQVD-PGNTILDCLNRIKWEQDGTLAF 63 Query: 77 RRSCREGICGSCGMNIDGTNTLAC------------------VKDMKDIKGAIAVYPLPH 118 R++CR ICGSC M I+G + LAC +I V PL + Sbjct: 64 RKNCRNTICGSCAMVINGRSALACKENVGSELARLRNISASVYHADYHTINSITVAPLGN 123 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCS 177 M VIKDLVVDM++F+ ++ P++ T + + P +E LQ+ ++R +D C+MC C Sbjct: 124 MPVIKDLVVDMTNFWDNLETVTPYISTAARQIPEREFLQTPQERSLLDQTGNCIMCGACY 183 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQS 236 + C + N D ++GP L +AYR + DSRD+ Q RL+ ++ C C Sbjct: 184 SECNARQVNPD-FVGPHALAKAYRMVADSRDDNQENRLEEYNHTTQGVWGCTRCFYCDSV 242 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP G+ P I KIK +L+RK Sbjct: 243 CPMGVEPLAQINKIKQKILERK 264 >gi|145532473|ref|XP_001451992.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419669|emb|CAK84595.1| unnamed protein product [Paramecium tetraurelia] Length = 212 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 111/203 (54%), Positives = 151/203 (74%), Gaps = 2/203 (0%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPL 116 M LD LLYIK+ D +L+LRRSCREGICGSC MN +G + LAC D+ + PL Sbjct: 1 MYLDALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCAC 175 HM V+KDLVVDM++FY+Q+++I+P+LK SPK KE +QS EDR+ +DGLYECV+CAC Sbjct: 61 GHMFVVKDLVVDMTNFYTQYKTIDPYLKRKSPKEGNKEYIQSVEDRKLLDGLYECVLCAC 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 CSTSCPSYWW+ DRYLGPA+L+QAYRW++DSRDE+ ERL+ L + ++ C I C+ Sbjct: 121 CSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSF 180 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 +CPKGL+P +++ + ++ + K Sbjct: 181 TCPKGLDPQRSMNHLMKLIEEYK 203 >gi|320539686|ref|ZP_08039350.1| putative fumarate reductase (anaerobic), Fe-S subunit [Serratia symbiotica str. Tucson] gi|320030298|gb|EFW12313.1| putative fumarate reductase (anaerobic), Fe-S subunit [Serratia symbiotica str. Tucson] Length = 244 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 3/224 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R+NP+ P DT+ V D +LD L YIK+ P L+ R SCR ICGSC Sbjct: 8 KIEVMRYNPECDTKPYFDTFSVPYD-EQTSLLDALGYIKDNFAPDLSYRWSCRMAICGSC 66 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 GM ++ LAC ++ + V L + + +DLVVDM+HF +++P++ + Sbjct: 67 GMLVNQVPKLACKTFSREYSDGMKVEALGNFLIERDLVVDMTHFIESLEAMKPYIIGNNR 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +Q+ K C+ C C +CP + N +++GPA + A R+ +D+R Sbjct: 127 KPEEGANVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-QFIGPAAITLAQRYNLDNR 185 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 186 DHGKKQRMVPLNGQNGVWICTFVCYCSEVCPKHVDPAAAIQQGK 229 >gi|323473645|gb|ADX84251.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus REY15A] Length = 316 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPERGF--WWAEYKLKVDR-FIQFTEALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVAKKYNSHVITIEPMDYFKPIKDLIVDWDEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKVKPRLYQAKEVLEGKAEHRLKPEDQKELWKFAQCIWCGLCVSACPAV-IIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTR 233 >gi|146303459|ref|YP_001190775.1| succinate dehydrogenase iron-sulfur subunit [Metallosphaera sedula DSM 5348] gi|145701709|gb|ABP94851.1| succinate dehydrogenase subunit B [Metallosphaera sedula DSM 5348] Length = 319 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 13/235 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+ ++ R+N + Y + +D M + L IK++ DPTL R SC Sbjct: 6 EQREIVVKVKRYNQEKGE--YWQEYKLVVDRFTQMT-EVLRRIKSEQDPTLAYRASCHMA 62 Query: 84 ICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +CGSC M I+G LAC K I V P+ + V KDL+VDM FY++ Sbjct: 63 VCGSCAMRINGEPRLACKTLALDIVKKYDSNQITVEPMDYFKVQKDLIVDMDEFYARMFK 122 Query: 139 IEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++P + + E ED++++ +C+ C C ++CP+ + +LGPA Sbjct: 123 VKPRLYPSKEVVEGRGEHRLRPEDQRELWKFAQCIWCGLCVSACPAVR-IDEEFLGPAAH 181 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ERL L D +RC C CP+ + P I K + Sbjct: 182 AKGYRFLADPRDTIYDERLKILAD--SAWRCTYCYQCFNVCPRDVEPVTTIKKTR 234 >gi|188996323|ref|YP_001930574.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931390|gb|ACD66020.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 348 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++R++P P TY + ++ G +L L K + DP+++ R +CR ICGSC Sbjct: 6 LKVFRYDPTKDAEPYYKTYKLPVEK-GMTLLAALFKAKEEQDPSISFRYNCRAAICGSCA 64 Query: 90 MNIDGTNTLAC-----VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + I+G LAC K I V P ++ V+KDLV DM + + I+PW Sbjct: 65 VKINGHANLACKVQITHLLEKYNTDTIIVEPAGNIRVLKDLVYDMDWVVDKLKRIKPWFI 124 Query: 145 TVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P PA E Q D QKID +C++C C + C + N D +LGP ++ +AYR+ Sbjct: 125 PKEPPPADGKEYRQDPFDHQKIDYASDCILCNSCMSDCNALKVNKD-FLGPMVISKAYRF 183 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + DSRD + ERL+ + F L C M CT CPK + P + I + +++ + Sbjct: 184 IADSRDGAKKERLEEVLKEFNLEWCVRCMECTTRCPKEVQPYENIIRTRIIAAEEG 239 >gi|227829208|ref|YP_002830987.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus L.S.2.15] gi|229577977|ref|YP_002836375.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus Y.G.57.14] gi|284996563|ref|YP_003418330.1| succinate dehydrogenase or fumarate reductase iron-sulfur protein [Sulfolobus islandicus L.D.8.5] gi|227455655|gb|ACP34342.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus L.S.2.15] gi|228008691|gb|ACP44453.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus Y.G.57.14] gi|284444458|gb|ADB85960.1| succinate dehydrogenase or fumarate reductase iron-sulfur protein [Sulfolobus islandicus L.D.8.5] gi|323476294|gb|ADX81532.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus HVE10/4] Length = 316 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPERGF--WWAEYKLKVDRFTQFT-EALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVAKKYNSHVITIEPMDYFKPIKDLIVDWDEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKVKPRLYQAKEVLEGKAEHRLKPEDQKELWKFAQCIWCGLCVSACPAV-IIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTR 233 >gi|319790242|ref|YP_004151875.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermovibrio ammonificans HB-1] gi|317114744|gb|ADU97234.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermovibrio ammonificans HB-1] Length = 373 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 14/243 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +++R++PD P Y V ++ +L+ LLYIK+ +DPTL R CR +C Sbjct: 2 ETVTLQVFRYDPDKDQTPYYKEYEVPVEGT---LLNALLYIKDNLDPTLAFRAFCRSEVC 58 Query: 86 GSCGMNIDGTNTLACVKDMK-----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 GSC + ++G LAC M+ + + PL HM+VIKDLVVD+ + +++ Sbjct: 59 GSCSVRVNGKTKLACKTPMRELVDTWKGRPLRIDPLNHMAVIKDLVVDIDRPIEKMKTLI 118 Query: 141 PWLKTV----SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 PWL P E + E+ + C++C C ++C + +++RY GP Sbjct: 119 PWLVPDPRVVPTDPMHESIIYPEEMEAYKDQIHCMLCFSCYSACEAVE-DNERYRGPFAF 177 Query: 197 LQAYRWLIDSRD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +AYR+ +D RD E E+ L+ C C CPKG+ PA+ I ++ + Sbjct: 178 SRAYRFQVDRRDIETAKEKRIRYAVSGGLWSCVQCQKCLYVCPKGVKPAEDIQNLRGQAV 237 Query: 256 DRK 258 R Sbjct: 238 KRG 240 >gi|238618652|ref|YP_002913477.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus M.16.4] gi|238379721|gb|ACR40809.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus M.16.4] Length = 316 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 15/246 (6%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPERGF--WWAEYKLKVDRFTQFT-EALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVAKKYNSHVITIEPMDYFKPIKDLIVDWDEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKVKPRLYQAKEVLEGKAEHRLKPEDQKELWKFAQCIWCGLCVSACPAV-IIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-- 252 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTRSFT 236 Query: 253 MLLDRK 258 + K Sbjct: 237 RMYKAK 242 >gi|119776351|ref|YP_929091.1| fumarate reductase iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119768851|gb|ABM01422.1| succinate dehydrogenase subunit B [Shewanella amazonensis SB2B] Length = 242 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 9/239 (3%) Query: 24 EKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + + I+R++P D P M Y ++ + G V L ++ + DP+L CR Sbjct: 2 SGRILTFNIFRFDPQDAGDKPKMVKYQLE-ETSGMTVFIALNKLRQEQDPSLQFDFVCRA 60 Query: 83 GICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIE 140 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + ++ Sbjct: 61 GICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERLK 120 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPAILL 197 WL L+ D Q+ LY CV C C ++C + D ++G ++ Sbjct: 121 LWLHPKGDDLNIHRLEDPMDPQEAARLYELERCVECGVCVSACATKQMR-DTFVGAVGMM 179 Query: 198 QAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R+ +DSRD + ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 KIARFELDSRDGRSADDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 238 >gi|225174741|ref|ZP_03728739.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dethiobacter alkaliphilus AHT 1] gi|225169868|gb|EEG78664.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dethiobacter alkaliphilus AHT 1] Length = 242 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 120/230 (52%), Gaps = 3/230 (1%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I R + ++Y V + G VL+ L+ I+ DPTL+ R SCR +CG+C M Sbjct: 10 IRRQPAGEPDSAAYESYTVQVT-PGLTVLEALISIQENQDPTLSFRYSCRGAVCGACAML 68 Query: 92 IDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 I+ +LAC + I + PLP++ VI DLVVDM+ F+++++ I+PWL+ P Sbjct: 69 INNEISLACRTQIGYLNSANIKIEPLPNLPVITDLVVDMTEFWNKYQHIKPWLEPKDDPP 128 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDE 209 E + R K+D C++CA C CP + +LGPA L + YR+ DSR+ Sbjct: 129 ETERHMEEKLRVKLDPYANCILCASCYGVCPVPPRSATKNFLGPAALAKNYRFYADSREG 188 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ERL ++ L+ C T+ C CPK + P I + + L+ K+ Sbjct: 189 GRFERLLRVDSQDGLWGCDTVFKCVDVCPKDVPPTHGIVESRKKLMAGKL 238 >gi|227826566|ref|YP_002828345.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus M.14.25] gi|229583730|ref|YP_002842231.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus M.16.27] gi|227458361|gb|ACP37047.1| succinate dehydrogenase and fumarate reductaseiron-sulfur protein [Sulfolobus islandicus M.14.25] gi|228018779|gb|ACP54186.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus M.16.27] Length = 316 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 15/246 (6%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPERGF--WWAEYKLKVDRFTQFT-EALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVAKKYNSHVITIEPMDYFKSIKDLIVDWDEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKVKPRLYQAKEVLEGKAEHRLKPEDQKELWKFAQCIWCGLCVSACPAV-IIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-- 252 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTRSFT 236 Query: 253 MLLDRK 258 + K Sbjct: 237 RMYKAK 242 >gi|1654088|emb|CAA70250.1| succinate dehydrogenase subunit B [Sulfolobus acidocaldarius] Length = 317 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 E+ ++ R+ + Y + +D + L IK++ DPTL R SC Sbjct: 4 KNEEAEVIIKVKRYTQEKGF--YWQEYKLKVDRFTQFT-EALRRIKSEQDPTLAYRASCH 60 Query: 82 EGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + +KDLVVD+ FY++ Sbjct: 61 MAVCGSCGMKINGEPKLACKTLVLDVIKKYGSNVITIEPMDYFKPVKDLVVDLDDFYNRM 120 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++ + +C+ C C ++CP+ + +LGPA Sbjct: 121 HKVKPRLYPSNEVLEGKAEHRLKPEDQKVLWKFAQCIWCGLCVSACPAVQEDP-EFLGPA 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+L D RD ERL L D +RC C CP+ + AI K + Sbjct: 180 AHAKGFRFLADPRDTITEERLKILID--SAWRCTYCYMCYNVCPRDIELVTAIKKTR 234 >gi|323700285|ref|ZP_08112197.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio sp. ND132] gi|323460217|gb|EGB16082.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio desulfuricans ND132] Length = 246 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++ I+R+NP+ KG+ P M Y +D ++ + L ++ + DP+L CR G Sbjct: 2 GRQIKFEIFRYNPERKGDVPHMQEYILD-EHPNMTLFIALNRLREEQDPSLIFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS-HFYSQHRSIEPW 142 ICG+C M I+G LAC KD+ G I ++PLP ++ DL VD F + E W Sbjct: 61 ICGACAMVINGRPGLACQTKTKDLPGHIILHPLPVFKLVGDLSVDTGVWFREMYAKTESW 120 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A E + ++I L C+ C CC +C + D ++G A L + Sbjct: 121 IHTKKVFDPAAHEERMDNGVAEQIYELERCIECGCCIAACGTARLRDD-FMGAAALNRIA 179 Query: 201 RWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+++D RDE + + + + ++ C ++ C CPKGL + ++ + Sbjct: 180 RFVVDPRDERTDRQYFEVIGNDNGIFGCMGLLACEDVCPKGLPLQNQLGFLRRKM 234 >gi|325294645|ref|YP_004281159.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065093|gb|ADY73100.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 321 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E ++I R+NP P + Y +D+ G +L+ L YIK+ IDPTL+ R CR Sbjct: 2 ETKKVTFKIRRFNPKKDEKPYYEDYTIDV-PKGMTILEALQYIKDNIDPTLSFRAFCRSA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMK-----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 ICGSC + I+G LAC + + + PL +M VI+DL+V+ + + Sbjct: 61 ICGSCSVKINGYPKLACKTQVFNELEIYNTDTLIIEPLDNMEVIRDLIVNWDSAFERMEK 120 Query: 139 IEPWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + P+L + + +K D +C++C C + C NS+ Y GP Sbjct: 121 MNPYLIPDPEVVPETLDEESKVYPRELKKFDKFTDCILCTSCYSMCGIVRINSN-YGGPF 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + YR+ +D RD + ER + F ++ C C CPK + P I K++ + Sbjct: 180 PFARVYRFAVDPRDSLKKER-AKVGYAFDMWNCVRCNKCADVCPKHIAPVDGILKLRGLS 238 Query: 255 LDRKI 259 ++ + Sbjct: 239 IEVGL 243 >gi|75906746|ref|YP_321042.1| succinate dehydrogenase iron-sulfur subunit [Anabaena variabilis ATCC 29413] gi|75700471|gb|ABA20147.1| succinate dehydrogenase subunit B [Anabaena variabilis ATCC 29413] Length = 330 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 22/247 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R P + Y ++ D G +LD L IK + D TL R++CR ICGSC Sbjct: 5 FKIIRQ--QQNSAPIVQNYLMETD-PGNTILDCLNRIKWEQDGTLAFRKNCRNTICGSCA 61 Query: 90 MNIDGTNTLACV----------------KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 M I+G + LAC + I + PL +M VIKDLVVDM+ F+ Sbjct: 62 MRINGRSALACKENVGSELARLEKISSSANQATNIPEITIAPLGNMPVIKDLVVDMNSFW 121 Query: 134 SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ P++ T + + P +E LQ+ ++R ++D C+MC C + C + N D ++G Sbjct: 122 NNLEAVAPYVSTAARQVPEREFLQTPDERSRLDQTGNCIMCGACYSECNAREVNPD-FVG 180 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P L +AYR + DSRD ERL++ + ++ C + C CP + P + I KIK Sbjct: 181 PHALAKAYRMVADSRDTSTAERLESYNEGTKGVWGCTRCLYCDSVCPMEVAPLEQITKIK 240 Query: 252 MMLLDRK 258 +L +K Sbjct: 241 QEILSQK 247 >gi|212633325|ref|YP_002309850.1| fumarate reductase iron-sulfur subunit [Shewanella piezotolerans WP3] gi|212554809|gb|ACJ27263.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Shewanella piezotolerans WP3] Length = 247 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 9/244 (3%) Query: 19 NAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + + + + I+R++P + P M Y ++ + G V L ++ + D +L Sbjct: 2 SQEATKGRMLTFNIFRYDPQEPGDKPKMVKYQLE-ETPGMTVFIALNRLREEQDTSLQFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 CR GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + Sbjct: 61 FVCRAGICGSCAMVINGFPTLACRTLTSKYPKGEIMLMPLPGFELIGDLSVNTGKFMREL 120 Query: 137 -RSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ WL +S L++ D K+ L CV C C ++C + D ++G Sbjct: 121 AERLKLWLHPISDDIDVHRLEAPMDPAEAAKLYELERCVECGVCVSACATAQMR-DTFVG 179 Query: 193 PAILLQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +++ R+ +DSRD + + + + ++ C T++ C +CPK L + IA ++ Sbjct: 180 AVGMMKLARFELDSRDGRELEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLR 239 Query: 252 MMLL 255 + Sbjct: 240 RKMA 243 >gi|114561645|ref|YP_749158.1| fumarate reductase iron-sulfur subunit [Shewanella frigidimarina NCIMB 400] gi|114332938|gb|ABI70320.1| succinate dehydrogenase subunit B [Shewanella frigidimarina NCIMB 400] Length = 241 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M TY + + G V L ++ DP+L CR Sbjct: 2 SQARTLTFSIFRYDPQEPGDKPKMVTYSL-TEAPGMTVFIALNQLRETQDPSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC + I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTANYPDGHIKLMPLPGFDLIGDLSVNTGKFMRELSERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 WL S S E+ K+ L CV C C ++C + D ++G + Sbjct: 121 SLWLHPNSADNDIHRIEAPMSPEEATKLYELERCVECGVCVSACATKQMR-DTFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD + ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFELDSRDTRTADDFYHVIGNQDGVFGCMTLLGCQDTCPKDLPHMQQIAYLRRKMA 239 >gi|17228440|ref|NP_484988.1| succinate dehydrogenase iron-sulfur subunit [Nostoc sp. PCC 7120] gi|17130291|dbj|BAB72902.1| succinate dehydrogenase iron-sulfur protein subunit [Nostoc sp. PCC 7120] Length = 333 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 128/247 (51%), Gaps = 22/247 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R P + Y+++ D G +LD L IK + D TL R++CR ICGSC Sbjct: 5 FKIIRQ--QQNSAPIVQNYFIETD-PGNTILDCLNRIKWEQDGTLAFRKNCRNTICGSCA 61 Query: 90 MNIDGTNTLACV----------------KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 M I+G + LAC + I + PL +M VIKDLVVDM+ F+ Sbjct: 62 MRINGRSALACKENVGSELARLQKISSSANQATNIPEITIAPLGNMPVIKDLVVDMNSFW 121 Query: 134 SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ P++ T + + P +E LQ+ ++R ++D C+MC C + C + N D ++G Sbjct: 122 NNLEAVAPYVSTAARQVPEREFLQTPDERSRLDQTGNCIMCGACYSECNAREVNPD-FVG 180 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P L +AYR + DSRD +RL++ + ++ C + C CP + P + I KIK Sbjct: 181 PHALAKAYRMVADSRDTDTAQRLESYNEGTKGVWGCTRCLYCDSVCPMEVAPLEQITKIK 240 Query: 252 MMLLDRK 258 +L +K Sbjct: 241 QEILTQK 247 >gi|167625801|ref|YP_001676095.1| fumarate reductase iron-sulfur subunit [Shewanella halifaxensis HAW-EB4] gi|167355823|gb|ABZ78436.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella halifaxensis HAW-EB4] Length = 247 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 9/244 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + T + + I+R++P P M Y ++ + G V L ++ + D +L Sbjct: 2 SQETAKGRTLTFNIFRYDPQVPGDKPKMVKYQLE-EAPGMTVFIALNRLREEQDTSLQFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 CR GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + Sbjct: 61 FVCRAGICGSCAMVINGFPTLACRTLTAKYPKGEINLMPLPGFELIGDLSVNTGKFMREL 120 Query: 137 -RSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ WL +S L++ D K+ L CV C C ++C + D ++G Sbjct: 121 AERLKLWLHPISDDIDVHRLEAPMDPAEAAKLYELERCVECGVCVSACATKQMR-DTFVG 179 Query: 193 PAILLQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +++ R+ +DSRD + + + + ++ C T++ C +CPK L + IA ++ Sbjct: 180 AVGMMKLARFELDSRDGRELEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLR 239 Query: 252 MMLL 255 + Sbjct: 240 RKMA 243 >gi|229583187|ref|YP_002841586.1| succinate dehydrogenase iron-sulfur subunit [Sulfolobus islandicus Y.N.15.51] gi|228013903|gb|ACP49664.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfolobus islandicus Y.N.15.51] Length = 316 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 ++ ++ R+NP+ Y + +D + L IK++ DPTL+ R SC Sbjct: 3 QSQEEEVILKVKRFNPERGF--WWAEYKLKVDRFTQFT-EALRRIKSEQDPTLSYRASCH 59 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K I + P+ + IKDL+VD + FY + Sbjct: 60 MAVCGSCGMKINGEPRLACKTLVLDVAKKYNSHVITIEPMDYFKPIKDLIVDWNEFYERM 119 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CP+ ++LGPA Sbjct: 120 FKVKPRLYQAKEVLEGKAEHRLKPEDQKELWKFAQCIWCGLCVSACPAV-IIDQQFLGPA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ER+ L D +RC C CP+ + P AI K + Sbjct: 179 AHAKGYRFLADPRDTITEERMKILIDSS--WRCTYCYQCFNVCPRDIEPVTAIKKTR 233 >gi|225847958|ref|YP_002728121.1| fumarate reductase, iron-sulfur subunit [Sulfurihydrogenibium azorense Az-Fu1] gi|225644035|gb|ACN99085.1| fumarate reductase, iron-sulfur subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 349 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 9/237 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +++R++P P TY + ++ G VL L K + DP+++ R +CR ICGSC Sbjct: 5 NLKVFRYDPTKDSEPYYKTYKLPVEK-GMTVLAALFKAKEEQDPSISFRYNCRAAICGSC 63 Query: 89 GMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 M I+G TLAC K I V P+ ++ +KDL+ DM + + I+PW Sbjct: 64 AMRINGHATLACKVQVTYILNKYQTDTIVVEPVGNIKPLKDLIYDMDWVVDKLKRIKPWF 123 Query: 144 KTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 P PA E Q D QKID +C++C C + C + N D +LGP ++ +AYR Sbjct: 124 IPKEPPPADGKEYRQDPFDHQKIDYASDCILCNSCMSDCNALKVNKD-FLGPMVISKAYR 182 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ DSRD + ERL+ + F L C M CT CPK + P + I + +++ + Sbjct: 183 FIADSRDGAKRERLEEVLKEFNLEWCVRCMECTTRCPKEVQPYENIIRTRIIAAEEG 239 >gi|147677353|ref|YP_001211568.1| fumarate reductase iron-sulfur subunit [Pelotomaculum thermopropionicum SI] gi|146273450|dbj|BAF59199.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Pelotomaculum thermopropionicum SI] Length = 249 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 I+R+NP+ G+ P M Y ++ ++ G + L I+ + DP+L CR Sbjct: 2 GRQLTLSIFRYNPNIPGDQPRMQDYKLE-EHEGMTLFVALNKIREEQDPSLMFDFVCRAA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC M I+G LAC + + V PLP +I DL VD ++ + Sbjct: 61 ICGSCAMMINGRPRLACKTMTRTLPSRFTVMPLPVFKLIGDLSVDTGTWFRNLQIRTEAW 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + K L+ D + + +Y C+ C CC +C + D +LG + + Sbjct: 121 IHTNKKFDPNELEVRMDNKVAEAIYEPERCIECGCCVAACVTANIRED-FLGATGINRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+++D RDE E + + + + C IM C CP + + +A ++ + + Sbjct: 180 RFMLDPRDERSDAEYFEVVGNEDGAFGCVGIMACADICPMEIPLQQNLAYVRRKMAKAGL 239 >gi|332702831|ref|ZP_08422919.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio africanus str. Walvis Bay] gi|332552980|gb|EGJ50024.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio africanus str. Walvis Bay] Length = 244 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 7/231 (3%) Query: 29 EYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I+R+NP + + P M Y +D + + L ++ + DP+L CR ICG+ Sbjct: 6 QFEIFRYNPQDPASVPHMQKYVLD-ETENMTLFIALNRLREEQDPSLQFDFCCRAAICGA 64 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ-HRSIEPWLKTV 146 C M I+G LAC K++ I + PLP ++ DL VD ++ Q + +E W+ T Sbjct: 65 CAMVINGRPNLACKTKTKELPDEITLLPLPVFKLVGDLSVDTGVWFRQMYDKVESWVHTS 124 Query: 147 S--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 A E + +++ L C+ C CC ++C + D +LG A L + R+++ Sbjct: 125 KAFDPAALEERMDNAVAEQVYELERCIECGCCVSACGTARLRPD-FLGAASLNRIARFVV 183 Query: 205 DSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D RD+ + + + ++ C ++ C CPKGL + ++ + Sbjct: 184 DPRDQRSDKDYYQIIGNDEGIFGCMGLLACEDVCPKGLPLQNQLGFLRRRM 234 >gi|125605463|gb|EAZ44499.1| hypothetical protein OsJ_29116 [Oryza sativa Japonica Group] Length = 206 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 4/198 (2%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPL 116 MVLD L IK + D TL RRSCREGICGSC M IDG NT+AC++ + + V PL Sbjct: 1 MVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNTVACLRPVDTDTSSATTVTPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCA 174 PHM V++DLVVD++ FY Q++S+EPWLK + + QS E+R+++DGLYEC++CA Sbjct: 61 PHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTETTEHAQSPEERKRLDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNC 233 CCS +CPSYWWN++ +LGPA +L AYRW+ DSRDE+ ER+ L E +LYRC I +C Sbjct: 121 CCSAACPSYWWNAEAFLGPAAMLHAYRWVSDSRDEYAAERVQALAEGWDKLYRCRMIKSC 180 Query: 234 TQSCPKGLNPAKAIAKIK 251 T +CPK L+PA AI+ +K Sbjct: 181 TATCPKSLDPAAAISAMK 198 >gi|170724876|ref|YP_001758902.1| fumarate reductase iron-sulfur subunit [Shewanella woodyi ATCC 51908] gi|169810223|gb|ACA84807.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella woodyi ATCC 51908] Length = 243 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P G P M Y ++ + G V L ++ + D +L CR Sbjct: 2 SQGRTLTFNIFRYDPQVSGDKPKMVKYQIE-ETPGMSVFIALNLLREQQDSSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K +G I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTSKYPQGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + E+ ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPDQDDVDVHRLEAPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD + + + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKLARFELDSRDTRSVEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|46581665|ref|YP_012473.1| fumarate reductase iron-sulfur subunit [Desulfovibrio vulgaris str. Hildenborough] gi|46451088|gb|AAS97733.1| fumarate reductase, iron-sulfur protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235305|gb|ADP88159.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris RCH1] Length = 247 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R +P + P MDT+ + + + L ++ + DP+L CR G Sbjct: 2 GRTLVFNIFRHDPQDAVSTPRMDTFRLQ-ETDRMTLFIALHRLREEQDPSLKFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPW 142 +CGSC M I+G LAC +D+ I + PLP ++ DL VD + F + ++ E W Sbjct: 61 VCGSCAMVINGRPGLACHTKTRDLPDTITLLPLPVFKLVGDLAVDTGTWFRAMYQRTESW 120 Query: 143 LKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T P E +E I L C+ C CC +C + D +L PA L+ Sbjct: 121 VHTSVPFDEHAAEARMENETANAIYELDRCIECGCCVAACGTANMRPD-FLAPAGFLRVA 179 Query: 201 RWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+L D RDE + + ++ C ++ C CPK L + ++ L Sbjct: 180 RFLADPRDERDLNAYYELIGTEDGIFGCMGLLACEDVCPKHLPLQNQLGYLRRKL 234 >gi|127511269|ref|YP_001092466.1| fumarate reductase iron-sulfur subunit [Shewanella loihica PV-4] gi|126636564|gb|ABO22207.1| succinate dehydrogenase subunit B [Shewanella loihica PV-4] Length = 243 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P P M Y ++ + G V L ++ + DP+L CR Sbjct: 2 SQGRTLTFNIFRYDPQMPDDKPKMVKYQLE-EAPGMTVFIALNMLREQQDPSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGYPTLACRTLTSKYPKGDITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + E+ K+ L CV C C ++C + D ++G + Sbjct: 121 KLWLHPRNDEADIHRIEAPMDPEEAAKLYELERCVECGVCVSACATKQMR-DTFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD + + + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFELDSRDARSVEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 Query: 256 DR 257 Sbjct: 240 TA 241 >gi|34557226|ref|NP_907041.1| fumarate reductase iron-sulfur subunit [Wolinella succinogenes DSM 1740] gi|120494|sp|P17596|FRDB_WOLSU RecName: Full=Fumarate reductase iron-sulfur subunit gi|6730471|pdb|1QLB|B Chain B, Respiratory Complex Ii-Like Fumarate Reductase From Wolinella Succinogenes gi|6730474|pdb|1QLB|E Chain E, Respiratory Complex Ii-Like Fumarate Reductase From Wolinella Succinogenes gi|14278676|pdb|1E7P|B Chain B, Quinol:fumarate Reductase From Wolinella Succinogenes gi|14278679|pdb|1E7P|E Chain E, Quinol:fumarate Reductase From Wolinella Succinogenes gi|14278682|pdb|1E7P|H Chain H, Quinol:fumarate Reductase From Wolinella Succinogenes gi|14278685|pdb|1E7P|K Chain K, Quinol:fumarate Reductase From Wolinella Succinogenes gi|85544300|pdb|2BS3|B Chain B, Glu C180-> Gln Variant Quinol:fumarate Reductase From Wolinella Succinogenes gi|85544303|pdb|2BS3|E Chain E, Glu C180-> Gln Variant Quinol:fumarate Reductase From Wolinella Succinogenes gi|85544306|pdb|2BS4|B Chain B, Glu C180-> Ile Variant Quinol:fumarate Reductase From Wolinella Succinogenes gi|85544309|pdb|2BS4|E Chain E, Glu C180-> Ile Variant Quinol:fumarate Reductase From Wolinella Succinogenes gi|2282000|emb|CAA04215.1| fumarate reductase iron-sulfur subunit [Wolinella succinogenes] gi|34482942|emb|CAE09941.1| FUMARATE REDUCTASE IRON-SULFUR PROTEIN [Wolinella succinogenes] gi|220880606|emb|CAP45371.1| fumarate reductase iron-sulfur subunit [Cloning vector pFrdcat2] Length = 239 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + R+++++P + P Y ++ + + L I+ DP L CR G Sbjct: 2 GRMLTIRVFKYDPQSAVSKPHFQEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM I+G +LAC KD + I + PLP +IKDL VD ++++ + +E Sbjct: 61 ICGSCGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E Q++ L C+ C CC +C + D ++G A L + Sbjct: 121 WIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAACGTKIMRED-FVGAAGLNRV 179 Query: 200 YRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R++ID DE E + + D ++ C T++ C CPK L IA ++ ++ Sbjct: 180 VRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMV 236 >gi|157377245|ref|YP_001475845.1| fumarate reductase iron-sulfur subunit [Shewanella sediminis HAW-EB3] gi|157319619|gb|ABV38717.1| Succinate dehydrogenase [Shewanella sediminis HAW-EB3] Length = 243 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y ++ + G V L ++ D +L CR Sbjct: 2 SQGRTLTFNIFRYDPQEPGDKPKMVKYQLE-EAPGMTVFIALNMLREHQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTSKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL+ + E+ K+ L CV C C ++C + D ++G + Sbjct: 121 KLWLQPNLDDVDVHRLEAPMAPEEAAKLYELERCVECGVCVSACATKQMR-DSFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRDE + + + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFELDSRDERTVEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|332795934|ref|YP_004457434.1| succinate dehydrogenase subunit B [Acidianus hospitalis W1] gi|332693669|gb|AEE93136.1| succinate dehydrogenase, subunit B [Acidianus hospitalis W1] Length = 233 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 8/233 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R++ + Y + +D V++ L IK + DPTL+ R SC G+CGS Sbjct: 5 ITLKVRRYSKEKGS--RWQEYKLKVDR-FTTVVEALRRIKTEQDPTLSFRASCHMGVCGS 61 Query: 88 CGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CGM I+G LAC + + K I + P+ + VIKDL+VD+ Y + I P + Sbjct: 62 CGMKINGKPKLACKTLIVNEGKKEITIEPMDNFPVIKDLIVDLDSVYRKMNKIIPRVTPP 121 Query: 147 SP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + E ED++++ +C++C C ++CP N D +LGPA+L YR+ Sbjct: 122 EEVIQGKAETRLKPEDQKELWSFAQCIICGLCYSACPVVETNKD-FLGPAVLAMVYRFSA 180 Query: 205 DSRDEFQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D RD +RL+ ++DP ++ C +C+ CP+ ++P+ AI ++K M + Sbjct: 181 DPRDTLGKKRLEIVDDPIIGIWNCRVAGSCSFVCPRNVDPSLAIQRLKEMSIK 233 >gi|256830827|ref|YP_003159555.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfomicrobium baculatum DSM 4028] gi|256580003|gb|ACU91139.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfomicrobium baculatum DSM 4028] Length = 245 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 L ++ I+R+NP++K + P M T+ ++ + + L ++ + DP L CR G Sbjct: 2 GRLLQFEIFRYNPEDKESTPHMQTFVLE-ETTNMTLFIALNRLREEQDPGLIFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS-HFYSQHRSIEPW 142 ICG+C M I+G LAC KD+ I + PLP +I DL VD F ++ E W Sbjct: 61 ICGACAMVINGRPGLACQTKTKDLSETITLLPLPVFKLIGDLSVDTGIWFREMYQKTESW 120 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T +E + ++I L C+ C CC +C + D ++G A L + Sbjct: 121 IHTTKEFDSAKEEERMDNAVAEEIYELERCIECGCCIAACGTARLRDD-FMGAAALNRIA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R++ID RD+ + D + + + ++ C ++ C CPK L + ++ + Sbjct: 180 RFVIDPRDQRTDNQYFDIIGNDYGIFGCMGLLACEDVCPKKLPLQNQLGFLRRKM 234 >gi|22204168|emb|CAC86879.1| succinate dehydrogenase [Acidianus ambivalens] Length = 233 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 8/233 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R++ + Y +++D V++ L IK + DPTL+ R SC G+CGS Sbjct: 5 VTLKVRRYSKEKGS--WWQEYKLNVDR-FTTVIEALRRIKTEQDPTLSFRASCHMGVCGS 61 Query: 88 CGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 CGM I+G LAC + + K I + P+ + VIK L+VD+ Y + I P + Sbjct: 62 CGMKINGKPKLACKTLIVNEGKKEITIEPMDNFPVIKGLIVDLDSVYRKMNKIIPRVTPP 121 Query: 147 SP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + E ED++++ + +C++C C ++CP N D +LGPA+L AYR+ Sbjct: 122 EEVIQGKAETRLKPEDQKELWSVAQCIICGLCYSACPVVETNKD-FLGPAVLAMAYRFSA 180 Query: 205 DSRDEFQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D RD +RL+ ++DP ++ C +C+ CP+ ++P+ AI ++K M + Sbjct: 181 DPRDTLGKKRLEIVDDPIIGIWNCRVAGSCSVVCPRNVDPSLAIQRLKEMSMK 233 >gi|118137365|pdb|2BS2|B Chain B, Quinol:fumarate Reductase From Wolinella Succinogenes gi|118137368|pdb|2BS2|E Chain E, Quinol:fumarate Reductase From Wolinella Succinogenes Length = 241 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + R+++++P + P Y ++ + + L I+ DP L CR G Sbjct: 2 GRMLTIRVFKYDPQSAVSKPHFQEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM I+G +LAC KD + I + PLP +IKDL VD ++++ + +E Sbjct: 61 ICGSCGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E Q++ L C+ C CC +C + D ++G A L + Sbjct: 121 WIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAACGTKIMRED-FVGAAGLNRV 179 Query: 200 YRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R++ID DE E + + D ++ C T++ C CPK L IA ++ ++ Sbjct: 180 VRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMV 236 >gi|148906497|gb|ABR16401.1| unknown [Picea sitchensis] Length = 230 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 105/181 (58%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K + IYRWNPD+ P ++ Y ++ CGPMVLD L+ IK++ DP+LT RRSCREG Sbjct: 38 ASKPKTFSIYRWNPDHTEKPRLENYTINTKECGPMVLDALIKIKSETDPSLTFRRSCREG 97 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G N LAC+ ++ + + PLPHM V+KDLVVDM++FY+Q++SIEPW Sbjct: 98 ICGSCAMNINGCNGLACLTKIEVASDSATTITPLPHMFVVKDLVVDMTNFYNQYKSIEPW 157 Query: 143 LKTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 LK +P KE+LQS +DR K+DG+YEC++CACCSTSCPSYWWN ++YLGPA LL A R Sbjct: 158 LKRKTPPQDGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPAALLHANR 217 Query: 202 W 202 W Sbjct: 218 W 218 >gi|3341644|emb|CAA13166.1| z62f [Vibrio cholerae] Length = 172 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 93/172 (54%), Positives = 123/172 (71%), Gaps = 2/172 (1%) Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDM 129 DP++ RRSCREG+CGS G+N++G N LAC+ I + PLP + V++DL+VDM Sbjct: 1 DPSIAFRRSCREGVCGSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDM 60 Query: 130 SHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + FY + ++P+L P++E LQS E+R +DGLYEC+MCACC+TSCPS+WWN D Sbjct: 61 TQFYDNYAKVKPFLIADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPD 120 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +++GPA LL AYRWLIDSRD ERL NL+D F ++RCH IMNC CPKG Sbjct: 121 KFIGPAGLLAAYRWLIDSRDTATDERLSNLDDAFNVFRCHGIMNCVSVCPKG 172 >gi|157960224|ref|YP_001500258.1| fumarate reductase iron-sulfur subunit [Shewanella pealeana ATCC 700345] gi|157845224|gb|ABV85723.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella pealeana ATCC 700345] Length = 247 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 9/244 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + + + I+R++P P M Y ++ + G V L ++ DP+L Sbjct: 2 SQQMAKGRTLTFSIFRFDPQVPGDKPKMVEYQIE-EAPGMTVFIALNQLRELQDPSLQFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 CR GICGSC M I+G TLAC K G I + PLP +I DL V+ F + Sbjct: 61 FVCRAGICGSCAMVINGMPTLACRTLTSKFTDGKIKLMPLPGFELIGDLSVNTGKFMREI 120 Query: 137 -RSIEPWLKT---VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ WL E S E+ K+ L CV C C ++C + D ++G Sbjct: 121 AERLKLWLHPKVGDDDIHRLEAPMSPEEAAKLYELERCVECGVCVSACATKQMR-DTFVG 179 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ Sbjct: 180 AVGLMKIARFELDSRDARNAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLR 239 Query: 252 MMLL 255 + Sbjct: 240 RKMA 243 >gi|298489658|ref|YP_003719835.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein ['Nostoc azollae' 0708] gi|298231576|gb|ADI62712.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein ['Nostoc azollae' 0708] Length = 335 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 22/247 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R + TY + ++ G +LD L IK + D TL R++CR ICGSC Sbjct: 8 FKIIRQ--QENSAAVVQTYPLQVE-PGNTILDCLNRIKWEQDGTLAFRKNCRNTICGSCS 64 Query: 90 MNIDGTNTLACV----------------KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 M I+G + LAC K I + PL +M VIKDLVVDMS F+ Sbjct: 65 MQINGLSALACKENVGSQLARLQHIQSPKTQNKTIHEITIAPLGNMPVIKDLVVDMSIFW 124 Query: 134 SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ P++ T + + P KE LQ+ ++R +D C+MC C + C + NSD ++G Sbjct: 125 NNLEAVAPYVSTAARQVPEKEFLQTPQERSLLDQTGNCIMCGACYSECNAREVNSD-FVG 183 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P L +AYR + DSRD RL+N + ++ C C CP + P + I KIK Sbjct: 184 PHALAKAYRMVADSRDSNTENRLENYNEGTKGVWGCTRCFYCDSVCPMEVAPLEQITKIK 243 Query: 252 MMLLDRK 258 +L RK Sbjct: 244 QEILARK 250 >gi|332797828|ref|YP_004459328.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidianus hospitalis W1] gi|332695563|gb|AEE95030.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidianus hospitalis W1] Length = 315 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + E+ +I R++ + Y + +D M + L IK + DPTL R SC Sbjct: 2 SEEEKEIVVKIKRFSKEKGS--WWQEYKLKVDRFTQMT-EVLRRIKTEQDPTLAYRASCH 58 Query: 82 EGICGSCGMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K K I + P+ V KDLVVD + FY++ Sbjct: 59 MAVCGSCGMKINGEPRLACKTLALDMVRKYGKNEITIEPMDFFPVTKDLVVDWTDFYNRM 118 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CPS N +LGPA Sbjct: 119 FKVKPRLYPSKEVLEGKAEHRLKPEDQRELWKFEQCIWCGLCVSACPSVK-NDPEFLGPA 177 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ERL L D +RC C CP+ + P I K + Sbjct: 178 AHAKGYRFLADPRDTIFDERLKILID--SAWRCTYCYQCFNVCPRDIEPVTTIKKTR 232 >gi|237755586|ref|ZP_04584202.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237692249|gb|EEP61241.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 348 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++R++P P TY + ++ G +L L K + DP+++ R +CR ICGSC Sbjct: 6 LKVFRYDPTKNAEPYYKTYKLPVEK-GMTLLAALFKAKEEQDPSISFRYNCRAAICGSCA 64 Query: 90 MNIDGTNTLAC-----VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + I+G LAC K I V P ++ V+KDLV DM + + I+PW Sbjct: 65 VKINGHANLACKVQITHLLEKYNTDTIIVEPAGNIRVLKDLVYDMDWVVDKLKRIKPWFI 124 Query: 145 TVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P PA E Q D QKID +C++C C + C + N D +LGP ++ +AYR+ Sbjct: 125 PKEPPPADGKEYRQDPFDHQKIDYASDCILCNSCMSDCNALKVNKD-FLGPMVISKAYRF 183 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + DSRD + ERL+ + F L C M CT CPK + P + I + +++ + Sbjct: 184 IADSRDGAKRERLEEVLKDFNLEWCVRCMECTTRCPKEVQPYENIIRTRIIAAEEG 239 >gi|258405191|ref|YP_003197933.1| fumarate reductase iron-sulfur subunit [Desulfohalobium retbaense DSM 5692] gi|257797418|gb|ACV68355.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfohalobium retbaense DSM 5692] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 7/234 (2%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + ++R NP D +P M T+YVD + + L I+ + DP+L CR G+ Sbjct: 3 RILQIDVFRHNPADPGSSPRMQTFYVD-ETESMTLFIALNRIREEHDPSLQFDFCCRAGV 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPWL 143 CGSCGM I+G LAC +D+ I + PLP +I DL VD + F H +E W+ Sbjct: 62 CGSCGMVINGRPGLACHTKTQDLPKQIVLLPLPVFQLIGDLSVDTGTWFRDMHERVESWI 121 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 T S A E + + + L C+ C CC +C + D +LG A L + R Sbjct: 122 HTDSEFDPEALEEPMDNAVAETVFELDRCIECGCCIAACATARMRPD-FLGAAGLNRIAR 180 Query: 202 WLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +++D RDE + + + ++ C ++ C CPKGL+ +A ++ + Sbjct: 181 FVMDPRDERTDDAFYELIGTDEGIFGCMGLLACDDVCPKGLSLQTQLAFVRRKM 234 >gi|332376835|gb|AEE63557.1| unknown [Dendroctonus ponderosae] Length = 228 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 108/189 (57%), Positives = 131/189 (69%), Gaps = 8/189 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +K IYRWNPD P M Y VDL CGPMVLD L+ IKN++DPTLT R Sbjct: 37 PQQQKPPKIKTVSIYRWNPDKPQQKPYMQDYKVDLSQCGPMVLDALIKIKNEMDPTLTFR 96 Query: 78 RSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNI G NTLAC K ++ +YPLPHM V+KDLV DM++FY+Q+ Sbjct: 97 RSCREGICGSCAMNIGGVNTLACISKIDTNLGKKAKIYPLPHMYVVKDLVPDMTNFYNQY 156 Query: 137 RSIEPWLKTVS------PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +SIEPWL+ K + LQS +DR K+DGLYEC++CACCSTSCPSYWWN D+Y Sbjct: 157 KSIEPWLQRDDAVAAKGTKEVTQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKY 216 Query: 191 LGPAILLQA 199 LGPA+L++ Sbjct: 217 LGPAVLMRI 225 >gi|120601177|ref|YP_965577.1| fumarate reductase iron-sulfur subunit [Desulfovibrio vulgaris DP4] gi|120561406|gb|ABM27150.1| succinate dehydrogenase subunit B [Desulfovibrio vulgaris DP4] Length = 247 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R +P + P MDT+ + + + L ++ + DP+L CR G Sbjct: 2 GRTLVFNIFRHDPQDAVSTPRMDTFRLQ-ETDRMTLFIALHRLREEQDPSLKFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPW 142 +CGSC M I+G LAC +D+ I + PLP ++ DL VD + F + ++ E W Sbjct: 61 VCGSCAMVINGRPGLACHTKTRDLPDTITLLPLPVFKLVGDLAVDTGTWFRAMYQRTESW 120 Query: 143 LKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T P E ++ I L C+ C CC +C + D +L PA L+ Sbjct: 121 VHTSVPFDEHAAEARMENDTANAIYELDRCIECGCCVAACGTANMRPD-FLAPAGFLRVA 179 Query: 201 RWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+L D RDE + + ++ C ++ C CPK L + ++ L Sbjct: 180 RFLADPRDERDLNAYYELIGTEDGIFGCMGLLACEDVCPKHLPLQNQLGYLRRKL 234 >gi|308044577|ref|NP_001183639.1| hypothetical protein LOC100502233 [Zea mays] gi|4803710|emb|CAB42658.1| iron sulfur subunit of succinate dehydrogenase (truncated) and ribosomal protein S14 [Zea mays] gi|238013616|gb|ACR37843.1| unknown [Zea mays] Length = 348 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 108/179 (60%), Positives = 131/179 (73%), Gaps = 3/179 (1%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGIC Sbjct: 46 TKTFSIYRWDPDSPSTKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 105 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC MNIDG N LAC+ + A V PLPHM V+KDLVVDM++FYSQ++S+EPWLK Sbjct: 106 GSCAMNIDGDNGLACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKR 165 Query: 146 VSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P + E+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A R Sbjct: 166 KDQPPQQGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRL 224 >gi|119509018|ref|ZP_01628169.1| succinate dehydrogenase [Nodularia spumigena CCY9414] gi|119466184|gb|EAW47070.1| succinate dehydrogenase [Nodularia spumigena CCY9414] Length = 359 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 22/247 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R +P + TY +++D G +LD L IK + D TL R++CR ICGSC Sbjct: 29 FKIIRQ--QQNSSPVVQTYLLEVD-SGNTILDCLNQIKWEQDGTLAFRKNCRNTICGSCA 85 Query: 90 MNIDGTNTLACVKD----------------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 M I+G + LAC ++ + I V PL +M VIKDLVV+MS F+ Sbjct: 86 MRINGRSALACKENVGSELARLPQVPALENNANTIREITVAPLGNMPVIKDLVVEMSSFW 145 Query: 134 SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ P++ T + + P +E LQ+ +R ++D C+MC C + C + N D ++G Sbjct: 146 NHLDAVAPYVSTAARQVPEREFLQTPLERSRLDQTGNCIMCGACYSECNAREVNPD-FVG 204 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P L +A+R + DSRD RL+ + ++ C C CP + P + I KIK Sbjct: 205 PHALAKAFRMVADSRDSETENRLETYNEGTKGVWGCTRCFYCDSVCPMEVAPLEQITKIK 264 Query: 252 MMLLDRK 258 +L RK Sbjct: 265 QEILQRK 271 >gi|117918861|ref|YP_868053.1| fumarate reductase iron-sulfur subunit [Shewanella sp. ANA-3] gi|117611193|gb|ABK46647.1| succinate dehydrogenase subunit B [Shewanella sp. ANA-3] Length = 243 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D +L CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + + E+ ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKANDISIHHLEEPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFELDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|254787568|ref|YP_003074997.1| fumarate reductase iron-sulfur subunit [Teredinibacter turnerae T7901] gi|237684446|gb|ACR11710.1| fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit [Teredinibacter turnerae T7901] Length = 254 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 8/250 (3%) Query: 16 KIWNAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 K A GE I+R NP D P MDT+ V+ + + L I+ DPT+ Sbjct: 7 KQVEAGAGEYRKLTVNIFRHNPQDENSVPHMDTFEVE-EADSMTLFILLNEIRENQDPTV 65 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 CR GICGSC M ++G LAC +++ + + PLP +I DL V+ + Sbjct: 66 QFDFVCRAGICGSCAMLVNGRPKLACRTLTQELPQVLNLAPLPGFELIGDLSVNTGKWMR 125 Query: 135 QH-RSIEPWLKTVSPKPAKELL---QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +E W+ + L E KI L CV C CC +C + SD + Sbjct: 126 NMSEHLETWIHNREQERDFCDLEEKMEPEVADKIYELERCVECGCCIAACGTAQMRSD-F 184 Query: 191 LGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +G + Q R+ ID RD+ + + L ++ C T++ C CPK L A+ IA Sbjct: 185 VGAVGINQLARFKIDPRDDRTDADFYEVLGTEEGVFGCMTLLGCDDMCPKELPLAQQIAY 244 Query: 250 IKMMLLDRKI 259 ++ + ++ Sbjct: 245 MRRKMALAEV 254 >gi|224373149|ref|YP_002607521.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Nautilia profundicola AmH] gi|223588907|gb|ACM92643.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Nautilia profundicola AmH] Length = 319 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 9/228 (3%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 ++ R+NP+ + + V++++ VL+ L+YIK+KID +LT R CR ICGSC M Sbjct: 9 KVKRYNPETNES-YWQDFEVEVEDS-LTVLELLMYIKDKIDESLTFRAFCRSAICGSCAM 66 Query: 91 NIDGTNTLAC--VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 I+G LAC K G I + PL H+ ++KDLVVD +++ + ++P+L+ Sbjct: 67 IINGRAGLACKIQAKDKIKNGVIRIEPLNHLPIVKDLVVDQDPAFNKLKKVKPYLEPDPK 126 Query: 149 KPA----KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K E L + E+ K D +C++C C C + + YLGP L +A+R+++ Sbjct: 127 KVPDNLKCESLVTPEEFAKYDKQTDCILCMACYGQCNALE-GEEAYLGPFQLTKAFRFIM 185 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 DSRD E L + ++ C C +CPKG+ P + I +++ Sbjct: 186 DSRDGVDVEERIKLVEDAGIWDCVQCQMCLAACPKGIKPGEDILELRR 233 >gi|3378541|emb|CAA06781.1| succinate dehydrogenase, subunit B [Acidianus ambivalens] Length = 314 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 112/237 (47%), Gaps = 13/237 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + E+ +I R++ + Y + +D M + L IK + DPTL R SC Sbjct: 2 SEEEKEIVVKIKRFSKEKGS--WWQEYKLKVDRFTQMT-EVLRRIKTEQDPTLAYRASCH 58 Query: 82 EGICGSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGSCGM I+G LAC K K IA+ P+ VIKDL+VD + FY++ Sbjct: 59 MAVCGSCGMKINGEPRLACKTLALDMVKKYGKNEIAIEPMDFFPVIKDLIVDWTDFYNRM 118 Query: 137 RSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++P + + E ED++++ +C+ C C ++CPS N +LGPA Sbjct: 119 FKVKPRLYPSKEVLEGKAEHRLKPEDQRELWKFEQCIWCGLCVSACPSVK-NDPEFLGPA 177 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR+L D RD ERL L D +RC C CP+ + P I K + Sbjct: 178 AHAKGYRFLADPRDTIFDERLKILID--SAWRCTYCYQCFNVCPRDIEPVTTIKKTR 232 >gi|224370320|ref|YP_002604484.1| fumarate reductase iron-sulfur subunit [Desulfobacterium autotrophicum HRM2] gi|223693037|gb|ACN16320.1| SdhB [Desulfobacterium autotrophicum HRM2] Length = 244 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 10/242 (4%) Query: 22 TGEKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + ++ ++ I R+NP P M TY V ++ G + L I+ DP+L C Sbjct: 2 SDQERTLKFHILRYNPQLKGDTPEMKTYEV-VEAPGMTIFIALNDIRENQDPSLQFDFIC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RS 138 R GICGSCGM I+G LAC K G I + PLP +I DL V+ F Q Sbjct: 61 RAGICGSCGMVINGAPDLACRTLTSKFPDGEITLLPLPGFELIGDLSVNTGKFMRQMSER 120 Query: 139 IEPWLKTVSPKPAKEL----LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +E W+ + + +I L CV C CC ++C + D +LG Sbjct: 121 VESWIHDKCAENVDLCKLEERMDPDTADEIYELERCVECGCCISACATKRMR-DGFLGAV 179 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ R+ +D RD+ + + + D ++ C T++ C CPK L IA ++ Sbjct: 180 GFMRLARYSLDPRDKRSDTDFYEIIGDDDGVFGCMTLLGCQDYCPKDLPHQTQIAYLRRK 239 Query: 254 LL 255 + Sbjct: 240 MA 241 >gi|163748715|ref|ZP_02155968.1| succinate dehydrogenase [Shewanella benthica KT99] gi|161331825|gb|EDQ02629.1| succinate dehydrogenase [Shewanella benthica KT99] Length = 247 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 9/244 (3%) Query: 22 TGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + I+R++P + P M Y ++ + G V L ++ D +L C Sbjct: 5 ETKGRSLTFNIFRYDPQEAGDKPKMVKYQIE-ETPGMTVFIALNMLREHQDTSLQFDFVC 63 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQH-RS 138 R GICGSC M I+G TLAC K+ I + PLP +I DL V+ F + Sbjct: 64 RAGICGSCAMVINGLPTLACRTLTKNYPKGEITLMPLPGFELIGDLSVNTGKFMRELAER 123 Query: 139 IEPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 ++ WL +S S ++ K+ L CV C C ++C + + ++G Sbjct: 124 LKLWLHPMSEDADVHRLETPMSPQEAAKLYELDRCVECGVCVSACATKQMR-ESFVGAVG 182 Query: 196 LLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 183 MMKLARFELDSRDSRTTEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKM 242 Query: 255 LDRK 258 + Sbjct: 243 AMAQ 246 >gi|24371995|ref|NP_716037.1| fumarate reductase iron-sulfur subunit [Shewanella oneidensis MR-1] gi|113968749|ref|YP_732542.1| fumarate reductase iron-sulfur subunit [Shewanella sp. MR-4] gi|114049107|ref|YP_739657.1| fumarate reductase iron-sulfur subunit [Shewanella sp. MR-7] gi|24345853|gb|AAN53482.1|AE015488_4 fumarate reductase iron-sulfur protein [Shewanella oneidensis MR-1] gi|113883433|gb|ABI37485.1| succinate dehydrogenase subunit B [Shewanella sp. MR-4] gi|113890549|gb|ABI44600.1| succinate dehydrogenase subunit B [Shewanella sp. MR-7] Length = 243 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D +L CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + + E+ ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKANDISIHRLEEPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFELDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|160877179|ref|YP_001556495.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS195] gi|160862701|gb|ABX51235.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS195] gi|315269383|gb|ADT96236.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS678] Length = 243 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D +L CR Sbjct: 2 SQGRTLTFNIFRYDPLEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL S + L+ D ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKSNDISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|242278198|ref|YP_002990327.1| fumarate reductase iron-sulfur subunit [Desulfovibrio salexigens DSM 2638] gi|242121092|gb|ACS78788.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio salexigens DSM 2638] Length = 245 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+ I+R+NP D P M T+ +D + + L ++ + DP L CR G Sbjct: 2 SRQLEFDIFRYNPQDKGSVPHMQTFVLD-ETENMTLFIALNRLREEQDPGLIFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS-HFYSQHRSIEPW 142 ICG+C M ++G LAC D+ I + PLP +I DL VD F +++ E W Sbjct: 61 ICGACAMVVNGKPRLACQTKTVDLPERITLLPLPVYKLIGDLSVDTGVWFREMYQTTESW 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A E +E ++I L C+ C CC +C + D +LG A L + Sbjct: 121 IHTTKTFDPNAIEERMENEVAEQIYELERCIECGCCVAACGTARLRDD-FLGAASLNRVA 179 Query: 201 RWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+++D RD+ + + + ++ C ++ C CPK L + ++ + Sbjct: 180 RFVVDPRDQRTDRDYFEIIGNDEGIFGCMGLLGCEDVCPKNLPLQNQLGFLRRKM 234 >gi|186685983|ref|YP_001869179.1| succinate dehydrogenase iron-sulfur subunit [Nostoc punctiforme PCC 73102] gi|186468435|gb|ACC84236.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nostoc punctiforme PCC 73102] Length = 351 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 22/247 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++ R +P + TY V+ + G +LD L +IK + D TL R++CR ICGSC Sbjct: 21 FKVIRQ--QQNSSPIVQTYLVEAE-PGNTILDCLNHIKWEQDGTLAFRKNCRNTICGSCA 77 Query: 90 MNIDGTNTLACVKD----------------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 M I+G + LAC ++ ++ I + PL +M VIKDLVVDMS F+ Sbjct: 78 MRINGRSALACKENVGSELARLQQIPSSQSKVNVIPEITIAPLGNMPVIKDLVVDMSSFW 137 Query: 134 SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ P++ T + + P +E LQ+ ++R ++D C+MC C + C + + + ++G Sbjct: 138 NNLEAVAPYVSTAARQVPEREFLQTPQERSRLDQTGNCIMCGACYSECNAREVDPN-FVG 196 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P L +AYR + DSRD RL + + ++ C + C CP + P + I KIK Sbjct: 197 PHALAKAYRMVADSRDSDTENRLASYNEGTKGVWGCTRCLYCDSVCPMEVAPLEQITKIK 256 Query: 252 MMLLDRK 258 +L K Sbjct: 257 QEILTHK 263 >gi|218442216|ref|YP_002380545.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. PCC 7424] gi|218174944|gb|ACK73677.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 7424] Length = 326 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 17/240 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++ R + P + +Y ++++ G +L+ L IK + D TL R++CR ICGSCG Sbjct: 5 FKVLRQ--KSNSTPRVQSYTLEVEA-GNTILECLNRIKWEQDGTLAFRKNCRNTICGSCG 61 Query: 90 MNIDGTNTLACVKD-----------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 M I+G + LAC ++ I V P+ +M VIKDL+VDM F+ Sbjct: 62 MRINGRSALACKQNIGEELERFSSTTNGGIPEITVAPMGNMPVIKDLIVDMKSFWDTLEE 121 Query: 139 IEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++P++ T + P +E LQS E+R+++D + C++C C + C + N ++GP L Sbjct: 122 VDPYVSTSARMIPEREFLQSPEERERLDQMGNCILCGACFSECNARDVNP-EFVGPHALA 180 Query: 198 QAYRWLIDSRDEFQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +A+R +ID+RD RL+ P ++ C C CP + P I KIK +L Sbjct: 181 KAHRMVIDNRDTETTTRLEKYNTPKAGVWGCTRCYMCNAVCPMDVAPMDQIGKIKQEILK 240 >gi|256087664|ref|XP_002579985.1| succinate dehydrogenase iron-sulfur protein [Schistosoma mansoni] gi|238665486|emb|CAZ36224.1| succinate dehydrogenase iron-sulfur protein, putative [Schistosoma mansoni] Length = 208 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 110/185 (59%), Positives = 133/185 (71%), Gaps = 6/185 (3%) Query: 23 GEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 +K + IYRWNPD P M Y VDL++CGPMVLD L+ IKN+ DPTLT RRSCR Sbjct: 24 SAPRMKTFSIYRWNPDKRGEKPTMQNYQVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCR 83 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 EGICGSC MNI+G N LAC+ ++ +YPLPHM VIKDL+ DM++FY+Q+R IE Sbjct: 84 EGICGSCAMNIEGRNHLACIWEIDPDINKTTKIYPLPHMYVIKDLIPDMNNFYAQYRFIE 143 Query: 141 PWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P+LK + QS EDR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L Sbjct: 144 PYLKKKNVDEEDIGKKTYYQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVL 203 Query: 197 LQAYR 201 LQAYR Sbjct: 204 LQAYR 208 >gi|226941259|ref|YP_002796333.1| fumarate reductase iron-sulfur subunit [Laribacter hongkongensis HLHK9] gi|226716186|gb|ACO75324.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein [Laribacter hongkongensis HLHK9] Length = 249 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + I+R +P P M Y ++ + G + L ++ + DPTL CR Sbjct: 2 ANRTLTFSIFRHDPQAAGSTPHMQEYRLE-ETPGMSIFIALNRLREEQDPTLQFDFVCRA 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIE 140 GICGSC M I+G TLAC I + PLP +I DL V+ F I Sbjct: 61 GICGSCAMVINGKPTLACRTLTATFASPHITLLPLPGFELIGDLSVNTGKFMRALSERIG 120 Query: 141 PWLKTVSPKPAKEL---LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 WL + S + ++ + C+ C CC C + D ++G Sbjct: 121 AWLHPKADSVDIHSVEAPMSPDLADELYEMERCIECGCCIAGCATAQMR-DTFMGAVGFN 179 Query: 198 QAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-L 255 + R+ +D RD + + + ++ C ++M C +CPK +N IA ++ L Sbjct: 180 KVARFALDDRDARTLDDFYHVIGNEDGVFGCMSLMGCQDNCPKDINHLGQIAYLRRKLAF 239 Query: 256 DRKI 259 RK+ Sbjct: 240 GRKV 243 >gi|5688945|dbj|BAA82748.1| mitochondrial ribosomal protein S14 [Oryza sativa Japonica Group] gi|5688950|dbj|BAA82751.1| mitochondrial ribosomal portein S14 [Oryza sativa Japonica Group] gi|42407916|dbj|BAD09056.1| mitochondrial ribosomal protein S14 [Oryza sativa Japonica Group] gi|215734910|dbj|BAG95632.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765431|dbj|BAG87128.1| unnamed protein product [Oryza sativa Japonica Group] Length = 350 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 110/180 (61%), Positives = 134/180 (74%), Gaps = 3/180 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGI Sbjct: 47 NTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ + A + PLPHM VIKDLVVDM++FY+Q++S+EPWLK Sbjct: 107 CGSCAMNIDGDNGLACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P+P KE+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A R Sbjct: 167 RKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRL 226 >gi|28611030|emb|CAD62368.1| chimeric SDH2-RPS14 protein [Triticum aestivum] Length = 366 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 107/180 (59%), Positives = 131/180 (72%), Gaps = 4/180 (2%) Query: 27 LKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGIC Sbjct: 47 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 106 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G+C MNIDG N LAC+ + + PLPHM V+KDLVVDM++FY+Q++S+EPWLK Sbjct: 107 GTCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVSPKPA--KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P A KE+ QS DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A R Sbjct: 167 RKDPPAAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRL 226 >gi|146294523|ref|YP_001184947.1| fumarate reductase iron-sulfur subunit [Shewanella putrefaciens CN-32] gi|145566213|gb|ABP77148.1| succinate dehydrogenase subunit B [Shewanella putrefaciens CN-32] Length = 243 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D +L CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQI-TETPGMTVFIALNKLREEQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + L+ D ++ L CV C C ++C + D ++G + Sbjct: 121 KLWLHPKANDISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-DTFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARSAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|120597332|ref|YP_961906.1| fumarate reductase iron-sulfur subunit [Shewanella sp. W3-18-1] gi|120557425|gb|ABM23352.1| succinate dehydrogenase subunit B [Shewanella sp. W3-18-1] gi|319427888|gb|ADV55962.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella putrefaciens 200] Length = 243 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D +L CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQI-TETPGMTVFIALNKLREEQDTSLQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL L+ D ++ L CV C C ++C + D ++G + Sbjct: 121 KLWLHPKPNDINVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-DTFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARSAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|146329285|ref|YP_001209915.1| fumarate reductase, iron-sulfur protein [Dichelobacter nodosus VCS1703A] gi|146232755|gb|ABQ13733.1| fumarate reductase, iron-sulfur protein [Dichelobacter nodosus VCS1703A] Length = 248 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 6/222 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 N ++ R+ P P + ++ +LD L IK+ DPTL R SCR +C Sbjct: 2 NKITLKVMRYRPGEDEKPWPQAFEIEWTQ-DMSILDALALIKDDFDPTLAYRWSCRMEVC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 GSCGM I+G LAC ++D I + L + KDLVVD+ F + I P++ Sbjct: 61 GSCGMVINGEPKLACSTFVRDYADAGEILIGALDAFPIEKDLVVDVEPFIDRLNRISPYI 120 Query: 144 KTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +P+ KE LQ+ + K C+ C C +CP N+D +LGPA A R Sbjct: 121 INKTPRALEEKEYLQTPKQLAKFKQYTMCINCMLCYQACPQLGINAD-FLGPAATALAQR 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + +D+RD +R L ++ C + C++ CPK ++P Sbjct: 180 YNLDNRDTAAAKRFKALNKENGIWACTFVGACSEVCPKQVDP 221 >gi|158336799|ref|YP_001517973.1| succinate dehydrogenase iron-sulfur subunit [Acaryochloris marina MBIC11017] gi|158307040|gb|ABW28657.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Acaryochloris marina MBIC11017] Length = 349 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 29/251 (11%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R + + TY +D+D +LD L IK + D +L R++CR ICGSC Sbjct: 5 FKISRQ--QQQSAVKVQTYSLDVDPS-TTILDCLNLIKWQQDGSLAFRKNCRNTICGSCS 61 Query: 90 MNIDGTNTLACVKDMK-----------------------DIKGAIAVYPLPHMSVIKDLV 126 M I+ LAC +++K D I + P+ +M VIKDLV Sbjct: 62 MRINHRAALACQQNVKAEVARSYSAWNKQNGADSDRENPDSIPVIEIAPMGNMPVIKDLV 121 Query: 127 VDMSHFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V+M F+ + +EP++ + S + P +E LQS EDR K+D + C++C C + C + Sbjct: 122 VEMDQFWQKLDQVEPYVSSASRQVPEREFLQSPEDRSKLDQMGNCILCGACYSDCNALPA 181 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPA 244 N ++GP L +A+R L D+RD+ RL+ D ++ C NC CP G+ P Sbjct: 182 NGS-FVGPHALAKAHRLLADTRDQATEHRLEQYNQDIQGVWGCTRCFNCNTVCPMGVAPL 240 Query: 245 KAIAKIKMMLL 255 I+KIK +L Sbjct: 241 DQISKIKSQVL 251 Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 29/94 (30%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F H + + + + Q I G++ C C C+T CP D+ Sbjct: 183 GSFVGPHALAKAHRLLADTRDQATEHRLEQYNQDIQGVWGCTRCFNCNTVCPMGVAPLDQ 242 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + A L DSR L +L Sbjct: 243 ISKIKSQVLANPTLPDSRPLRHRRVLVDLVQEGG 276 >gi|116749429|ref|YP_846116.1| fumarate reductase iron-sulfur subunit [Syntrophobacter fumaroxidans MPOB] gi|116698493|gb|ABK17681.1| succinate dehydrogenase subunit B [Syntrophobacter fumaroxidans MPOB] Length = 255 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 7/235 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++ ++R+NP D P M+T++++ + + L I+ + DPTL CR G Sbjct: 2 GRPLKFSVFRFNPLDPTSVPHMETFHLE-ETDAMTLYIALNRIREEQDPTLQFDFMCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPW 142 ICGSC M I+G LAC K + I + PLP +I DL VD S F + + +E + Sbjct: 61 ICGSCAMMINGRPDLACHTKTKKLPTDITLLPLPVFKLIGDLSVDTGSWFRAMNEKVESY 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A E S+E ++I L C+ C CC +C N+D ++G + Sbjct: 121 IHTDKTFDPKAPEERMSNELAEEIYELERCIECGCCVAACGKANINND-FMGATAFNRIA 179 Query: 201 RWLIDSRD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+++D RD E D L ++ C ++ C CPK + + ++ + Sbjct: 180 RFMLDPRDNRKTDEYFDVLRGDEGIFGCLGLLGCEDVCPKKIPLQDQLGMLRRKM 234 >gi|317486033|ref|ZP_07944887.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bilophila wadsworthia 3_1_6] gi|316922711|gb|EFV43943.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bilophila wadsworthia 3_1_6] Length = 261 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++R+NP D P M ++YV+ + + L I+ + DP+L CR G Sbjct: 2 SRKLHIEVFRYNPLDPASVPHMQSFYVE-EYSSMTLFIALNIIREQQDPSLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPW 142 ICGSCGM I+G LAC +D+ I ++PLP ++ DL VD ++ + R IE W Sbjct: 61 ICGSCGMVINGRPGLACHTQTRDLPDHIVLHPLPVFKLLGDLSVDTGVWFREVGRKIEAW 120 Query: 143 LKTVSP---KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + T A+E +E ++I L C+ C CC +C + D +LG A + + Sbjct: 121 VHTQDKAFDPRAEEKRMENELAEQIFELDRCIECGCCIAACGTARMRKD-FLGAATINRL 179 Query: 200 YRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+ ID RD E D + + ++ C ++ C CPK + + ++ ML + Sbjct: 180 ARFYIDPRDNRSEDEYYDVIGNDQGVFGCMGLLGCEDVCPKKIPLQDQLGIMRRMLALKS 239 Query: 259 I 259 + Sbjct: 240 V 240 >gi|303325793|ref|ZP_07356236.1| fumarate reductase, iron-sulfur protein [Desulfovibrio sp. 3_1_syn3] gi|302863709|gb|EFL86640.1| fumarate reductase, iron-sulfur protein [Desulfovibrio sp. 3_1_syn3] Length = 261 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP D P M T+ ++ ++ + L I+ D +L CR G Sbjct: 2 GRNLTFEIFRYNPLDPHSQPHMQTFNLE-EHPSMTLFIALNMIRETQDASLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPW 142 ICGSCGM I+G LAC D+ I+++PLP ++ DL VD ++ + IE W Sbjct: 61 ICGSCGMVINGRPGLACHTQTCDLPARISLHPLPVFKLLGDLSVDTGTWFRHVGKKIESW 120 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E +E +I L C+ C CC +C + D ++G + + Sbjct: 121 IHTNKAFDPDAQEERMDNELATQIFELDRCIECGCCVAACGTARMRED-FIGATAINRMA 179 Query: 201 RWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+ ID RD + D + D ++ C ++ C CPK L + ++ M+ + Sbjct: 180 RFYIDPRDNRTPADYYDLIGDDNGVFGCMGLLACDNVCPKQLPLQDQLGIMRRMVSAESV 239 >gi|323701700|ref|ZP_08113371.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfotomaculum nigrificans DSM 574] gi|323533236|gb|EGB23104.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfotomaculum nigrificans DSM 574] Length = 242 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 7/236 (2%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP+ P M Y + ++ G + L I+ + DP+L CR Sbjct: 2 SRQLTFSIFRYNPNTPEIKPYMQEYKL-TESTGMTIFVALNQIREEQDPSLMFDFVCRAA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICGSC M I+G LAC KD+ I + PLP +I DL VD ++ Sbjct: 61 ICGSCAMVINGKPRLACKTLTKDLPDTITLMPLPVFKLIGDLSVDTGTWFRHMALKTEAW 120 Query: 144 KTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + E +E KI C+ C CC C + D +LG A + + Sbjct: 121 IHTEKEFDPGALEERMDNETALKIYEAERCIECGCCIAGCATANIRED-FLGAAGINRVA 179 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+++D RDE + + + + C +M C +CP GL +A ++ ++ Sbjct: 180 RFMMDPRDERSDWQYFEVIGSDEGAFGCMGLMACDDNCPMGLPLQMQLAFVRRKMV 235 >gi|153002462|ref|YP_001368143.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS185] gi|151367080|gb|ABS10080.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS185] Length = 243 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D ++ CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSMQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + L+ D ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKANGISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|319941446|ref|ZP_08015774.1| succinate dehydrogenase subunit B [Sutterella wadsworthensis 3_1_45B] gi|319805066|gb|EFW01896.1| succinate dehydrogenase subunit B [Sutterella wadsworthensis 3_1_45B] Length = 283 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 8/240 (3%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + I R+NP D P M TY + ++ + L ++N+ DPTL CR GI Sbjct: 25 RMLKISILRYNPQDPDSVPHMQTYELQ-ESDSMTLFIALNDLRNEQDPTLQFDFVCRAGI 83 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPWL 143 CGSC M I+G LAC KD+ + PLP +I DL V+ + +E W+ Sbjct: 84 CGSCAMLINGKPGLACRTLTKDLPTEFTLAPLPAFELIGDLSVNTGKWMRNMSERMETWV 143 Query: 144 KTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + D + I L CV C CC C + D ++G + + Sbjct: 144 HMKNEEIDLRKKEVPMDPQLAEDIYVLDRCVECGCCIAGCGTVRVRPD-FIGAVGINKIA 202 Query: 201 RWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+ +D RDE + + + D ++ C +++ C CPK L IA I+ + ++ + Sbjct: 203 RFRLDPRDERNDADYYEVVGDESGVFGCMSLLACHDFCPKDLPLKTQIAFIRRKMAEQGM 262 >gi|126175945|ref|YP_001052094.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS155] gi|152999157|ref|YP_001364838.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS185] gi|160873763|ref|YP_001553079.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS195] gi|217971830|ref|YP_002356581.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS223] gi|304411294|ref|ZP_07392909.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|307306577|ref|ZP_07586320.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] gi|125999150|gb|ABN63225.1| succinate dehydrogenase subunit B [Shewanella baltica OS155] gi|151363775|gb|ABS06775.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS185] gi|160859285|gb|ABX47819.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS195] gi|217496965|gb|ACK45158.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS223] gi|304350487|gb|EFM14890.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|306910868|gb|EFN41296.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] gi|315265989|gb|ADT92842.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS678] Length = 241 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 9/238 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R++P + P M+ Y + + G V L ++ + DP+L CR G Sbjct: 2 SRQISFNIFRYDPQDGQDKPKMERYQL-TETPGMTVFIALNQLREQQDPSLQFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G TLAC + I + PLP +I DL V+ F + ++ Sbjct: 61 ICGSCAMVINGFPTLACRTLTANYPNGEITLMPLPGFELIGDLSVNTGKFMRELAERLKL 120 Query: 142 WLKTVSPKPAKE---LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 WL + E+ +I L CV C C ++C + D ++G +++ Sbjct: 121 WLHPKPDDQDIHRLENPMAPEEAARIYELERCVECGVCVSACATKQMR-DTFVGAVGMMK 179 Query: 199 AYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +DSRD + ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 IARFEMDSRDSRSADDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 237 >gi|125559971|gb|EAZ05419.1| hypothetical protein OsI_27631 [Oryza sativa Indica Group] gi|125602012|gb|EAZ41337.1| hypothetical protein OsJ_25852 [Oryza sativa Japonica Group] Length = 406 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 110/180 (61%), Positives = 134/180 (74%), Gaps = 3/180 (1%) Query: 26 NLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 N K + IYRW+PD+ P + Y VDL +CGPMVLD LL IKN+ DP+LT RRSCREGI Sbjct: 47 NTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC MNIDG N LAC+ + A + PLPHM VIKDLVVDM++FY+Q++S+EPWLK Sbjct: 107 CGSCAMNIDGDNGLACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLK 166 Query: 145 TVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P+P KE+ Q+ DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A R Sbjct: 167 RKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRL 226 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 46/63 (73%) Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + +A W+ DSRD+F ERLD++ D F+LYRCHTI NCT +CPKGLNPAK I IK + Sbjct: 344 GVKKASWWIQDSRDQFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQ 403 Query: 255 LDR 257 L+ Sbjct: 404 LEA 406 >gi|242308911|ref|ZP_04808066.1| fumarate reductase iron-sulfur protein [Helicobacter pullorum MIT 98-5489] gi|239524575|gb|EEQ64441.1| fumarate reductase iron-sulfur protein [Helicobacter pullorum MIT 98-5489] Length = 248 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 10/245 (4%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 R+ +++P++ P Y + + + L IK + DP L+ C Sbjct: 6 ENSNRTLTIRVLKFDPNSAISKPHFVEYKLQ-EAHSMTIFIVLNMIKEQFDPDLSFDFVC 64 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRS 138 R GICGSCGM I+G LAC KD I + PLP +IKDL VD ++++ + Sbjct: 65 RAGICGSCGMMINGRPRLACRTLTKDFPDGVITLMPLPAFKLIKDLSVDTGNWFNGMSKR 124 Query: 139 IEPWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +E W+ E Q++ L C+ C CC SC + D ++G A Sbjct: 125 VESWIHAQEKSEEHMSQLEERVEPEVAQEVFELDRCIECGCCIASCGTKLMRED-FVGAA 183 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + R+++D DE + + + D ++ C +++ C CPK L IA ++ Sbjct: 184 GLNRVVRFMLDPHDERTDADYYELVGDDNGVFGCMSLLACHDVCPKNLPLQSKIAYLRRK 243 Query: 254 LLDRK 258 + K Sbjct: 244 MATAK 248 >gi|114561862|ref|YP_749375.1| fumarate reductase iron-sulfur subunit [Shewanella frigidimarina NCIMB 400] gi|114333155|gb|ABI70537.1| succinate dehydrogenase subunit B [Shewanella frigidimarina NCIMB 400] Length = 241 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 9/238 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R++P + P M+ Y + + G V L ++ + D +L CR G Sbjct: 2 SRKITFNIFRYDPQDSQDKPKMERYEL-TETDGMTVFIALNQLREQQDTSLQFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-AIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G TLAC + I + PLP +I DL V+ F + ++ Sbjct: 61 ICGSCAMVINGFPTLACRTLTANYPDGEITLMPLPGFELIGDLSVNTGKFMRELAERLKL 120 Query: 142 WLKTVSPKPAKE---LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 WL + E+ +I L CV C C ++C + D ++G +++ Sbjct: 121 WLHPKPDDQDMHRLENPMAPEEAARIYELERCVECGVCVSACATKQMR-DTFVGAVGMMK 179 Query: 199 AYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +DSRD + ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 IARFEMDSRDNRSADDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 237 >gi|255659116|ref|ZP_05404525.1| fumarate reductase, iron-sulfur subunit [Mitsuokella multacida DSM 20544] gi|260848561|gb|EEX68568.1| fumarate reductase, iron-sulfur subunit [Mitsuokella multacida DSM 20544] Length = 314 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 11/239 (4%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + RI+R+ +G + Y V++ G VL+ L+ IK DP+L+ SCR ICG Sbjct: 1 MATLRIHRF---VEGRKWVQDYKVEVTK-GMTVLEALISIKEHQDPSLSFTCSCRSSICG 56 Query: 87 SCGMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 +C + ++G L+C K + + + + PL + VI+DL+VD Y++ + ++P Sbjct: 57 ACAVRVNGNAELSCEKLVSDLIARYQTEILTIEPLGNFRVIRDLIVDWDPKYARIKKVKP 116 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + A++ QS D K C++C C + C N +L P ++A Sbjct: 117 VVHPKDEFSAEDGCRQSPADFDKYKKYAGCILCGSCVSECNKNTLNQKDFLDPFAFVKAE 176 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSRD+ E L + D L+RC CT CPK L+PA AI K+K + Sbjct: 177 RITADSRDKDTEEHLKAVLDT-GLWRCFNCQECTAKCPKHLDPAGAIEKLKAATFKYHL 234 >gi|295698450|ref|YP_003603105.1| succinate dehydrogenase iron-sulfur protein [Candidatus Riesia pediculicola USDA] gi|291157036|gb|ADD79481.1| succinate dehydrogenase iron-sulfur protein [Candidatus Riesia pediculicola USDA] Length = 255 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 101/246 (41%), Positives = 151/246 (61%), Gaps = 8/246 (3%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLT 75 I + NL E IYR+N P M +Y+ ++ G M+LD L+ +K K DP+ + Sbjct: 2 IHIKKNQKDNL-ELSIYRYNSSISSYPYMKSYFFQMEKVKGKMLLDLLIQVKKK-DPSFS 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHF 132 R SC +G+CGS GMNI+G N L+C+ + I + PL ++KDL+VD+S F Sbjct: 60 FRMSCGQGVCGSDGMNINGRNGLSCITSVDWLIKRNKKIVIKPLTGFPILKDLIVDLSSF 119 Query: 133 YSQHRSIEPWLKTVSPK--PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 ++Q++ + P++ ++ +Q + R +++GLYEC++CACCS+SCPS+WWN ++ Sbjct: 120 FNQYQKVLPYIIKDQKDIFDKRKNIQKVDSRNQLEGLYECILCACCSSSCPSFWWNEKKF 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA +L YR+L+D RD RL L D F +++CH IMNC CPK LNP KAI + Sbjct: 180 LGPAAILVLYRFLLDDRDHGNDLRLRRLHDHFSVFKCHNIMNCVSFCPKKLNPNKAIRSV 239 Query: 251 KMMLLD 256 K+MLL Sbjct: 240 KIMLLK 245 >gi|220904800|ref|YP_002480112.1| fumarate reductase iron-sulfur subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869099|gb|ACL49434.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 261 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R+NP D + P M T+ ++ ++ + L I+ K D +L CR G Sbjct: 2 GRNLTFEIFRYNPLDPRSFPHMQTFQLE-EHPSMTLFIALNLIREKFDASLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPW 142 ICGSCGM I+G LAC D+ I ++PLP ++ DL VD ++ Q + IE W Sbjct: 61 ICGSCGMVINGRPGLACHTQTSDLPDHITLHPLPVFKLLGDLSVDTGTWFRQVGKKIESW 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E S+ +I L C+ C CC +C + D ++G + + Sbjct: 121 IHTNKEFDPDAQEERMSNSQATEIFELDRCIECGCCVAACGTARMRED-FIGATAINRMA 179 Query: 201 RWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+ ID RD + + + D ++ C ++ C CPK L + ++ M+ + Sbjct: 180 RFYIDPRDNRTPADYYELIGDDNGVFGCMGLLACDSVCPKQLPLQDQLGIMRRMVSMESV 239 >gi|121533283|ref|ZP_01665111.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermosinus carboxydivorans Nor1] gi|121307842|gb|EAX48756.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermosinus carboxydivorans Nor1] Length = 316 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 11/238 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 Y+I R++ + + Y D + G +L GL+ IK +DPTLT SCR +CG+ Sbjct: 4 ITYKIERFDGEKS---YLQEYQFDHE-PGKTILWGLIKIKEDLDPTLTFTASCRSAVCGA 59 Query: 88 CGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 C + ++G LAC + + + PL + VI+DLVVD + ++PW Sbjct: 60 CAVRVNGQAMLACETPLDAVLKRYNTDTLFLQPLANFKVIRDLVVDWEPKAQRLAEVKPW 119 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P Q+ D +KID C++C C++ C + + P I +A + Sbjct: 120 LIPHDEFTPQTGCRQTPADFKKIDTQAGCILCGACASECSKLSADGSDFYEPFIYAKAGK 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ DSRD+ ERL+ + L++C + C CPK + P + IAK++ + + R++ Sbjct: 180 FVSDSRDKASQERLEATFNK-GLWKCMHCVECVTKCPKNVAPGQEIAKLRQLSIKRRL 236 >gi|88706772|ref|ZP_01104473.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Congregibacter litoralis KT71] gi|88698953|gb|EAQ96071.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Congregibacter litoralis KT71] Length = 258 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 8/237 (3%) Query: 29 EYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + R NP D+ P +Y+V+L G + L I+ + DP+L CR GICGS Sbjct: 24 TLEVLRCNPGDSADQPHWQSYFVELT-EGMTLFIALSEIREQQDPSLQFDFVCRAGICGS 82 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEPWLKTV 146 C M I+G LAC + ++ + PLP ++I DL VD + +E W+ Sbjct: 83 CAMLINGRPGLACCTLLAELPSPTRLAPLPGFALIGDLSVDTGRWMRGMSERLETWITGA 142 Query: 147 SPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 S + +++ + ++I L C+ C CC +C + + D ++ L + R+ Sbjct: 143 STERDICEIEAPMEPSLAEEIYELERCIECGCCVAACGTAQMHED-FVTAVGLNKLARYR 201 Query: 204 IDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D RD+ + + + ++ C +++ C CPK L + IA ++ +L + Sbjct: 202 LDPRDDREDAAFYELIGNDDGVFACMSLLGCEDVCPKNLPLSTQIAYLRRAMLRESL 258 >gi|307721177|ref|YP_003892317.1| succinate dehydrogenase subunit B [Sulfurimonas autotrophica DSM 16294] gi|306979270|gb|ADN09305.1| succinate dehydrogenase subunit B [Sulfurimonas autotrophica DSM 16294] Length = 326 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 7/241 (2%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++++R+N D P + Y +++ + +VLD L IK D + + RRSCR G Sbjct: 8 TTQKVNFKVFRFNADEDYLPYYENYDMEVTSEE-VVLDILNRIKWDHDGSFSYRRSCRHG 66 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ICG+C + ++G +TLAC + M D+ + + PL VIKD+++D + F+ +H ++ Sbjct: 67 ICGACAIKVNGRSTLACKESMNDMVELFGNELVIEPLSKKRVIKDMIIDKADFWEKHDAV 126 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+L P E L S ED K+D C+ C C +CP+ N D + A Sbjct: 127 TPYLVAEIDENPQSENLVSPEDADKLDEADLCIQCGACHYACPAVEVNEDFFGP-AAFAA 185 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR+ D RD D E+ ++ C C ++CPK +NP I K+ M Sbjct: 186 AYRFSADVRDNSTSRLADVNEEKQGVWDCVKCFECAEACPKEINPIGKITKLHQMAFQEG 245 Query: 259 I 259 I Sbjct: 246 I 246 >gi|238927659|ref|ZP_04659419.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Selenomonas flueggei ATCC 43531] gi|238884584|gb|EEQ48222.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Selenomonas flueggei ATCC 43531] Length = 318 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 11/237 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +I+R+ +G +DT+ V + G VL L YIK + DPTL+ SCR ICG+C Sbjct: 4 TLKIHRY---VEGKSWVDTFTVP-RSTGLTVLGALTYIKEQQDPTLSFTCSCRSSICGAC 59 Query: 89 GMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 + ++G L+C + + + + PL + VI+DL+VD Y++ + ++P L Sbjct: 60 AVRVNGNAELSCEVLIDDLTARYQSDELTIEPLGNFRVIRDLIVDWDPKYARLKKVKPSL 119 Query: 144 KTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + LQS ED K C++C C + C N D +L P ++A + Sbjct: 120 HPKDEFTVETGCLQSPEDFNKYKKYAGCILCGSCVSECNKNTLNQDDFLDPFAFVKAEKL 179 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSR + E L + L+RC CT CPKGL+PA AI K+K + Sbjct: 180 VADSRSKSPEEHLKAVI-EAGLWRCFNCQECTAKCPKGLDPAGAIEKLKAETFKHHL 235 >gi|149193846|ref|ZP_01870944.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Caminibacter mediatlanticus TB-2] gi|149135799|gb|EDM24277.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Caminibacter mediatlanticus TB-2] Length = 322 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 125/238 (52%), Gaps = 10/238 (4%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++ R+N + P TY +++D +VLD L IK K D +LT RRSCR GICGSCG Sbjct: 5 VKVLRFNKEVDSKPYYKTYELEVDES-AVVLDVLDKIKWKFDGSLTYRRSCRHGICGSCG 63 Query: 90 MNIDGTNTLACVKDMKDI----KGAIAVYPLPHM--SVIKDLVVDMSHFYSQHRSIEPWL 143 + ++ N LAC +KD+ + + PL +IKDLV+D F+ + I+P+L Sbjct: 64 IKVNKKNVLACKTRVKDMVEKFGPTLLIEPLSLKVPQIIKDLVIDKRDFWEDEKRIKPYL 123 Query: 144 KTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P E L + ++ +K++ C+ C CC C S N D ++GP L +AY++ Sbjct: 124 IAAIDEHPKMEHLVTPKEVEKLEEAENCIACGCCYYECESKSENRD-FIGPMALAKAYKF 182 Query: 203 LIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + D RD + ERL+ +++ ++ C C + CPK ++P I + + + + Sbjct: 183 VADVRDRAKKERLEIVDELGSGVWDCVKCQACIEVCPKDVDPFTKITHLHNEIFEEGV 240 >gi|304438248|ref|ZP_07398189.1| fumarate reductase subunit B [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368614|gb|EFM22298.1| fumarate reductase subunit B [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 318 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 11/237 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +I+R+ +G +DT+ V + G VL L YIK + DPTL+ SCR ICG+C Sbjct: 4 TLKIHRY---VEGKSWVDTFTVP-RSTGLTVLGALTYIKEQQDPTLSFTCSCRSSICGAC 59 Query: 89 GMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 + ++G L+C + + + + PL + VI+DL+VD Y++ + ++P L Sbjct: 60 AVRVNGNAELSCEVLIDDLTARYQSDELTIEPLGNFRVIRDLIVDWDPKYARLKKVKPSL 119 Query: 144 KTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 A+ LQS ED K C++C C + C N D +L P ++A + Sbjct: 120 HPKDEFTAETGCLQSPEDFNKYKKYAGCILCGSCVSECNKNTLNQDDFLDPFAFVKAEKL 179 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + DSR + E L + L+RC CT CPKGL+PA AI K+K + Sbjct: 180 VADSRSKSPEEHLKAVI-EAGLWRCFNCQECTAKCPKGLDPAGAIEKLKAETFKHHL 235 >gi|126176124|ref|YP_001052273.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS155] gi|304412478|ref|ZP_07394084.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|307307137|ref|ZP_07586875.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] gi|125999329|gb|ABN63404.1| succinate dehydrogenase subunit B [Shewanella baltica OS155] gi|304349120|gb|EFM13532.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS183] gi|306910376|gb|EFN40807.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica BA175] Length = 243 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D ++ CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSMQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + L+ D ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKANDISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARSAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|217975029|ref|YP_002359780.1| fumarate reductase iron-sulfur subunit [Shewanella baltica OS223] gi|217500164|gb|ACK48357.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Shewanella baltica OS223] Length = 243 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 23 GEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + + I+R++P + P M Y + + G V L ++ + D ++ CR Sbjct: 2 SQGRQLTFNIFRYDPQEPNDKPKMVRYQL-TETPGMTVFIALNKLREEQDTSMQFDFVCR 60 Query: 82 EGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 GICGSC M I+G TLAC K KG I + PLP +I DL V+ F + + Sbjct: 61 AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + WL + + L+ D ++ L CV C C ++C + + ++G + Sbjct: 121 KLWLHPKANDISLHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGM 179 Query: 197 LQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ R+ +DSRD E ++ + ++ C T++ C +CPK L + IA ++ + Sbjct: 180 MKIARFEMDSRDARSAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMA 239 >gi|37522513|ref|NP_925890.1| succinate dehydrogenase iron-sulfur subunit [Gloeobacter violaceus PCC 7421] gi|35213514|dbj|BAC90885.1| succinate dehydrogenase iron-sulfur protein subunit [Gloeobacter violaceus PCC 7421] Length = 317 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 8/235 (3%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI R G+P +Y +D+D G VLD L+ IK +ID TL R++CR ICGS Sbjct: 3 ITIRIRRQ--AESGSPDYKSYGLDVD-PGTTVLDALMRIKGEIDGTLAFRKNCRNAICGS 59 Query: 88 CGMNIDGTNTLAC---VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 C M I+G + LAC ++D+ D +G I + P+ +M VIKDLVVDM+ F+ ++P++ Sbjct: 60 CAMRINGRSALACANRIRDVADARGEILIQPMGNMPVIKDLVVDMTSFWKHLDQVDPYVS 119 Query: 145 TV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T P KE LQ+ E R ++ C++C C + C S N + ++GP L +A R + Sbjct: 120 TAARRPPEKEFLQTPEQRAAVEQAGNCILCGACYSECNSREVNPN-FVGPHALAKAQRVM 178 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+RD+ +R P + C C + CP G+ P I KI+ LL K Sbjct: 179 ADNRDDRTAQRHALYNQPEFAWGCTRCFYCNEVCPMGVQPLDQIQKIRHELLTDK 233 >gi|68171603|ref|ZP_00544973.1| Succinate dehydrogenase (ubiquinone) [Ehrlichia chaffeensis str. Sapulpa] gi|67998970|gb|EAM85651.1| Succinate dehydrogenase (ubiquinone) [Ehrlichia chaffeensis str. Sapulpa] Length = 158 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 93/158 (58%), Positives = 119/158 (75%), Gaps = 1/158 (0%) Query: 1 MVEIMLPKRSRVKR-GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S+V + GK+ +A G KN+K ++IYRW+PD+ NP +DT+++DLD CG MV Sbjct: 1 MVQFFLPKNSKVNKNGKVHHARKGAKNVKCFKIYRWSPDDDENPRIDTFFIDLDECGQMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IKN++D TLT RRSCREGICGSC MNIDGTNTLAC K + DIK + +YPLPHM Sbjct: 61 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVNIYPLPHM 120 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 VIKDLV D+S+FY Q+ S+ PW++ P KE LQ Sbjct: 121 HVIKDLVPDLSNFYKQYESVTPWIQAEEPNHNKERLQQ 158 >gi|330835253|ref|YP_004409981.1| succinate dehydrogenase iron-sulfur subunit B [Metallosphaera cuprina Ar-4] gi|329567392|gb|AEB95497.1| succinate dehydrogenase iron-sulfur subunit B [Metallosphaera cuprina Ar-4] Length = 325 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 13/231 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++ R+N + Y + +D M + L IK++ DPTL R SC +CGS Sbjct: 16 IKVKVRRFNQERGQ--YWQEYKLVVDRFTQMT-EVLRRIKSEQDPTLAYRASCHMAVCGS 72 Query: 88 CGMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP- 141 C M ++ LAC K I V P+ V KDL+VDM FYS+ ++P Sbjct: 73 CAMKLNNEPRLACKTLALDLVRKYNTNEIVVEPMDFFKVEKDLIVDMEDFYSRMYKVKPR 132 Query: 142 -WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + E + ED++++ +C+ C C +SCP+ +LGPA + Y Sbjct: 133 LYPAKEVVENKAEQRLTPEDQKELWKFAQCIWCGLCVSSCPAVR-IDKEFLGPAAHAKGY 191 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+L D RD ERL L D +RC C CP+ + P I K + Sbjct: 192 RFLADPRDTLYEERLKVLIDSS--WRCTYCYQCFNVCPRDVEPVTTIKKTR 240 >gi|294495402|ref|YP_003541895.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanohalophilus mahii DSM 5219] gi|292666401|gb|ADE36250.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanohalophilus mahii DSM 5219] Length = 255 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 31/258 (12%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R + + DT+ ++ G VL+ L Y++ +D +L R +CR +CG Sbjct: 1 MVYLKIKRQD---ESREWYDTFDIE-QTPGMTVLEALFYVQEHMDGSLCFRYACRGAVCG 56 Query: 87 SCGMNIDGTNTLACVKD------------------------MKDIKGAIAVYPLPHMSVI 122 SCGM I+ LAC + I + PLP++ VI Sbjct: 57 SCGMLINRVPRLACRTQVGIAKKENTREGSGDIFVAGQKSESGEENEEILIEPLPNLKVI 116 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +DL+VDM FY+ SI+PW+ + P L + R KI+ C++CACC SCP Sbjct: 117 RDLIVDMDSFYNLVDSIKPWISSPEEHPEGGNLMDPDMRGKIEKYTNCILCACCHGSCPV 176 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D YL PA L +A+R +D R D + ERLD ++ ++ C + C CPK Sbjct: 177 -AARDDTYLSPATLAKAWRMHLDPREDDASRQERLDFVDSESGVWGCDLVYKCVAVCPKK 235 Query: 241 LNPAKAIAKIKMMLLDRK 258 + P I ++ + +K Sbjct: 236 VPPTLGIKALREQIEKKK 253 >gi|78356303|ref|YP_387752.1| fumarate reductase iron-sulfur subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218708|gb|ABB38057.1| succinate dehydrogenase subunit B [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 262 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 7/236 (2%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++R+NP P M ++++D + + L I+++ DP+L CR G Sbjct: 2 SRKLHIEVFRYNPATPDTKPYMQSFFID-EFDSMTLFIALNIIRDQHDPSLQFDFCCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR-SIEPW 142 ICGSCGM I+G LAC +D+ I ++PLP ++ DL VD ++ IE W Sbjct: 61 ICGSCGMVINGRPALACHTQTRDLPDHIVLHPLPVFKLVGDLSVDTGVWFRDVGTRIESW 120 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T A+E +E +I L C+ C CC +C + D ++G + + Sbjct: 121 IHTRKEFDPSAEETRMENELANQIFELDRCIECGCCVAACGTARMRED-FIGATSINRIA 179 Query: 201 RWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +D RDE + D + + ++ C ++ C CPK + + ++ ML Sbjct: 180 RFYMDPRDERSEDDYYDLIGNDAGVFGCMGLLACEDVCPKKIPLQDQLGIMRRMLA 235 >gi|213581909|ref|ZP_03363735.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 185 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 4/182 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LK 144 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+ L Sbjct: 64 GLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LI Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183 Query: 205 DS 206 DS Sbjct: 184 DS 185 >gi|331000488|ref|ZP_08324162.1| fumarate reductase iron-sulfur subunit [Parasutterella excrementihominis YIT 11859] gi|329571491|gb|EGG53174.1| fumarate reductase iron-sulfur subunit [Parasutterella excrementihominis YIT 11859] Length = 284 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 10/248 (4%) Query: 19 NAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLL-YIKNKIDPTLTL 76 + + I R+NP D P + TY V M L LL +++ DP+L Sbjct: 20 PQQAKAHRMLQVSILRYNPADPDSVPHLQTYSV--SETDSMTLYILLNELRDTQDPSLQF 77 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-Q 135 CR GICGSC M ++G TLAC +D+ + PLP +I DL V+ + Sbjct: 78 DFVCRAGICGSCAMLVNGKPTLACRCLTRDLPDHFTLAPLPGFELIGDLSVNTGKWMRGM 137 Query: 136 HRSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 I+ W +++ D ++I L CV C CC SC ++ D ++G Sbjct: 138 SERIQSWCHLNDDNVNLSKIETPMDPHLAEEIYLLDRCVECGCCVASCGNFRMRPD-FVG 196 Query: 193 PAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + R+ +D RD + + L ++ C +++ C CPK L IA ++ Sbjct: 197 AVAINKISRFRLDPRDHRNDADYYEILGTESGVFGCMSLLACHDFCPKDLPLKTQIAFMR 256 Query: 252 MMLLDRKI 259 + ++ I Sbjct: 257 RKMAEQGI 264 >gi|298675349|ref|YP_003727099.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanohalobium evestigatum Z-7303] gi|298288337|gb|ADI74303.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanohalobium evestigatum Z-7303] Length = 250 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 31/256 (12%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I R DT+ VD + G VL+ L I+ K D +L R +CR +CG Sbjct: 1 MVTLNIKR---QEDDKIWYDTFQVD-EKPGMNVLEALFEIQEKQDGSLCFRFACRGAVCG 56 Query: 87 SCGMNIDGTNTLACVKD-----------------------MKDIKGAIAVYPLPHMSVIK 123 SC M I+ LAC K K+ I + PLP++ VI+ Sbjct: 57 SCAMLINKVPRLACKKLVGDVKKEDISSLKSDQILTSPQFSKESNDRILIEPLPNLGVIR 116 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DLVVDM HFYS S++PW T + L ++K++ C++CA C CP+ Sbjct: 117 DLVVDMEHFYSLVDSVQPW-ITAEENYDDQHLIEPATQKKLEKYTNCILCAVCHGICPA- 174 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 D+YL PA L +A+R+ +D RD + +R + ++ ++ C + C CPK + Sbjct: 175 AARDDKYLSPAGLARAWRFQLDPRDSEKSKLQRYNIVDSLSGVWGCDLVYKCVAVCPKKV 234 Query: 242 NPAKAIAKIKMMLLDR 257 P KAI +++ + ++ Sbjct: 235 PPTKAIKQMRRQISEK 250 >gi|303257351|ref|ZP_07343365.1| fumarate reductase, iron-sulfur protein [Burkholderiales bacterium 1_1_47] gi|302860842|gb|EFL83919.1| fumarate reductase, iron-sulfur protein [Burkholderiales bacterium 1_1_47] Length = 277 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 10/248 (4%) Query: 19 NAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLL-YIKNKIDPTLTL 76 + + I R+NP D P + TY V M L LL +++ DP+L Sbjct: 13 PQQAKAHRMLQVSILRYNPADPDSVPHLQTYSV--SETDSMTLYILLNELRDTQDPSLQF 70 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-Q 135 CR GICGSC M ++G TLAC +D+ + PLP +I DL V+ + Sbjct: 71 DFVCRAGICGSCAMLVNGKPTLACRCLTRDLPDHFTLAPLPGFELIGDLSVNTGKWMRGM 130 Query: 136 HRSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 I+ W +++ D ++I L CV C CC SC ++ D ++G Sbjct: 131 SERIQSWCHLNDDNVNLSKIETPMDPHLAEEIYLLDRCVECGCCVASCGNFRMRPD-FVG 189 Query: 193 PAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + R+ +D RD + + L ++ C +++ C CPK L IA ++ Sbjct: 190 AVAINKISRFRLDPRDHRNDADYYEILGTESGVFGCMSLLACHDFCPKDLPLKTQIAFMR 249 Query: 252 MMLLDRKI 259 + ++ I Sbjct: 250 RKMAEQGI 257 >gi|255513855|gb|EET90120.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 254 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 7/210 (3%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD 106 TY +++ VLD L+ IK K D ++ R SCR ICGSC M I+G +LAC + Sbjct: 25 TYSMEVSQ-LTTVLDALISIKEKQDAKVSFRYSCRMAICGSCSMVINGKPSLACNTRVAL 83 Query: 107 -IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE----LLQSHEDR 161 + V PL +++ LV D F+ +H+S++PW+ QS E+R Sbjct: 84 LNSKTVEVAPLRGQPILRGLVSDFDDFFKKHKSVKPWIVHKDSAEKFRDDKVYKQSDEER 143 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C +CP ++GP L QAYR+ D+RDE + ERLD L+ Sbjct: 144 DRYLPFSGCIKCGLCLDACPVVNTEKG-FVGPQALAQAYRYNEDTRDEGKSERLDYLDTL 202 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ C C++ CPK ++PA AI +K Sbjct: 203 NGIWGCEYAGACSEVCPKSVDPALAIQLLK 232 >gi|325294642|ref|YP_004281156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065090|gb|ADY73097.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 359 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 14/243 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +I+R+NP+ P Y V ++ +L+ LYIK +D TL+ R CR +C Sbjct: 2 KTVILKIFRFNPEKDETPYYQDYEVPVEGT---LLNAFLYIKENLDSTLSFRAFCRSEVC 58 Query: 86 GSCGMNIDGTNTLACVKDMK-----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 GSC + ++G LAC MK + + PL H+ +I+DLVVD+ + R++ Sbjct: 59 GSCSVRVNGKTKLACKTPMKELVKTWNGKPLRIDPLNHLKIIRDLVVDIDEPIEKMRTLI 118 Query: 141 PWLKTVSPKPAKELLQ----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 PWL + + E+ + C++C C ++C + +++RY GP Sbjct: 119 PWLVPDPRVVPSDPRRESIIYPEEMEAYKDQIHCMLCFSCYSTCEAIK-DNERYRGPFAF 177 Query: 197 LQAYRWLIDSRD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +AYR+ +D D E E+ L+ C C CPKG+ PA+ I ++ + Sbjct: 178 SRAYRFQVDRGDIETAKEKRIRYSISGGLWSCVQCQKCLHVCPKGVKPAEDIQHLRGQAV 237 Query: 256 DRK 258 + Sbjct: 238 RKG 240 >gi|328952586|ref|YP_004369920.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfobacca acetoxidans DSM 11109] gi|328452910|gb|AEB08739.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfobacca acetoxidans DSM 11109] Length = 243 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 7/241 (2%) Query: 24 EKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + I+R+NP P M Y +D + V L ++ + DP+L CR Sbjct: 2 ENRTLNFSIFRYNPATPDIKPRMQDYQLD-ETPNMTVFIALNRLREEQDPSLIFDFVCRA 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC M I+G LAC D+ I + PLP ++ DL VD ++ Sbjct: 61 AICGSCAMLINGRPRLACKTLTIDLPENITLMPLPVFKLVGDLSVDTGVWFRHMGMRTES 120 Query: 143 LKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 K + + D I C+ C CC +C + D +LG A + + Sbjct: 121 WIHADQKFNPKAQEERMDNPTALDIYEAERCIECGCCIAACATANIRED-FLGAAGINRI 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+LID RD+ + + + ++ C +M C CP + +A ++ ++ Sbjct: 180 ARFLIDPRDKRTPSQVFEVVGTDEGVFGCIGLMACDVLCPMEIPLQTQLALVRRKMMGAA 239 Query: 259 I 259 I Sbjct: 240 I 240 >gi|224419198|ref|ZP_03657204.1| fumarate reductase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] gi|253828128|ref|ZP_04871013.1| Fumarate reductase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] gi|313142702|ref|ZP_07804895.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511534|gb|EES90193.1| Fumarate reductase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] gi|313131733|gb|EFR49350.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 248 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 10/245 (4%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 R+ ++NP++ P Y + + + L I+ + DP L+ C Sbjct: 6 ESSNRTLTIRVLKFNPNSAVSKPHFAEYKLQ-EAHSMTIFIVLNMIREQYDPDLSFDFVC 64 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRS 138 R GICGSCGM I+G LAC KD I + PLP +IKDL VD ++++ + Sbjct: 65 RAGICGSCGMMINGRPRLACRTLTKDFPDGVITLMPLPAFKLIKDLSVDTGNWFNGMSKR 124 Query: 139 IEPWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +E W+ E Q+I L C+ C CC +C + D ++G A Sbjct: 125 VESWIHAQEKSEEHMSQIEDRVEPEVAQEIFELDRCIECGCCIAACGTKLMRED-FVGAA 183 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + R+++D D+ + + + D ++ C +++ C CPK L IA ++ Sbjct: 184 GLNRVVRFMLDPHDQRTDADYYELVGDDNGVFGCMSLLACHDVCPKNLPLQSKIAYLRRK 243 Query: 254 LLDRK 258 + K Sbjct: 244 MATTK 248 >gi|48478068|ref|YP_023774.1| succinate dehydrogenase iron-sulfur subunit [Picrophilus torridus DSM 9790] gi|48430716|gb|AAT43581.1| succinate dehydrogenase iron-sulfur protein [Picrophilus torridus DSM 9790] Length = 312 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 11/236 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+ +I +++ +Y V +D M + L IK + DP+L+ R +C Sbjct: 3 EEKEITVKIRKYS--KANGESWQSYKVKVDRYTQMT-EVLRRIKTEQDPSLSYRAACHMA 59 Query: 84 ICGSCGMNIDGTNTLACVK---DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 +CGSC M I+G LAC D+ D K + + P+ + +DL+ D+ FY + ++ Sbjct: 60 VCGSCSMIINGEPRLACKTLALDIADEKNEVTLQPMGYFETERDLIPDIDEFYDRMHRVK 119 Query: 141 PWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P L K E + ED++++ +C+ C C ++CPS + +LGPA + Sbjct: 120 PRLYADDEVLKGDFEPRMTPEDQKEVWKFAQCIWCGLCVSACPSVR-IDENFLGPAAHAK 178 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YR+L DSRD + ER++ L D +RC + C + CP+ + P AI K K + Sbjct: 179 GYRFLADSRDTIRDERINILMD--SAWRCTSCYMCYEVCPRDIEPVIAIKKTKAYV 232 >gi|111025610|ref|YP_708030.1| succinate dehydrogenase Fe-S protein subunit [Rhodococcus jostii RHA1] gi|110824589|gb|ABG99872.1| succinate dehydrogenase Fe-S protein subunit [Rhodococcus jostii RHA1] Length = 234 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 3/213 (1%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD 106 ++ VD VLD LL I+ ++D ++ R SCR +CG+C + +DG + LAC + + Sbjct: 24 SFQVD-RFPAMTVLDVLLTIQRELDASIGFRFSCRVAMCGTCTLRVDGRSVLACQSIVPE 82 Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKID 165 K +I + P+ V++DL+VD F+ Q + + P++ + E+R+ ID Sbjct: 83 AKKSIEIAPMAGFPVVRDLIVDTEPFWEQWKRVTPYMAPKQGLDEPARVHPDSEERKAID 142 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C +SC +LGPA L +A + DSRD ERLD + + Sbjct: 143 PALDCIQCGACYSSCGVAGL-GKTFLGPAALNRAMVLITDSRDALGQERLDVVSSEGGVD 201 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RCH + CT CPKGL+PA+AI +++ ++ K Sbjct: 202 RCHLMYGCTNVCPKGLDPARAIRRLRTGRVEDK 234 >gi|324529722|gb|ADY49035.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 213 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 105/181 (58%), Positives = 136/181 (75%), Gaps = 4/181 (2%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 K +K + IYR+NP+ G P + + VDLD CG MVLD L+ IKN++DPTLT RRSCREG Sbjct: 33 KRIKTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREG 92 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI G NTLAC+ ++ +YPLPHM VIKDLV DM+ FY+Q+ SI+PW Sbjct: 93 ICGSCAMNIAGENTLACICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPW 152 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L+ + K+ QS ++++K+DGLYEC++CACCS SCPSYWWN+D+YLGPA+L+QAY Sbjct: 153 LQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKYLGPAVLMQAY 212 Query: 201 R 201 R Sbjct: 213 R 213 >gi|71907406|ref|YP_284993.1| fumarate reductase iron-sulfur subunit [Dechloromonas aromatica RCB] gi|71847027|gb|AAZ46523.1| succinate dehydrogenase subunit B [Dechloromonas aromatica RCB] Length = 252 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 7/242 (2%) Query: 19 NAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 P + I R NP D P + Y V+ + G + L I+ + DP+L Sbjct: 8 KKPDDQPRRLTLEILRHNPADPASVPHLQAYEVE-EAEGMTLFIALNEIRAQQDPSLMFD 66 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS-QH 136 CR GICGSC M ++G LAC +D+ I + PLP +I DL V+ + Sbjct: 67 FVCRAGICGSCAMLVNGRPGLACRTLTRDLGERITLAPLPVFELIGDLSVNTGKWMRGTS 126 Query: 137 RSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ W+ + E + I L C+ C CC C + +R++G Sbjct: 127 ERLQTWIHNDTETDLDALETRMEPATAEAIYELDRCIECGCCIAGCGTVQMR-ERFVGAV 185 Query: 195 ILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + R+ +D RD E + + D ++ C +++ C CPK L IA ++ Sbjct: 186 GLNKIARFRLDPRDTRSDEDFYELIGDDDGVFGCMSLVGCHDVCPKQLPLQTQIAFLRRK 245 Query: 254 LL 255 + Sbjct: 246 MA 247 >gi|170077714|ref|YP_001734352.1| succinate dehydrogenase iron-sulfur subunit [Synechococcus sp. PCC 7002] gi|169885383|gb|ACA99096.1| succinate dehydrogenase iron-sulfur protein subunit [Synechococcus sp. PCC 7002] Length = 333 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R P TY + + +LD L IK + D +L R++CR ICGSC Sbjct: 5 FNILRQR-QRNVAPEFFTYQLSVPES-TTILDCLNQIKWQQDGSLAFRKNCRNTICGSCA 62 Query: 90 MNIDGTNTLACVKDMKDIK-------------GAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 M I+G LAC ++++ I + PL + VIKDLVVDM+ F+ Q Sbjct: 63 MGINGRAALACKENVRQEITRLQGTDSDPGAIPKITITPLNNFPVIKDLVVDMTTFWQQL 122 Query: 137 RSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 ++ P+++ SP+ P E QS ++R+ ++ C++C C C + N +LGP Sbjct: 123 EAVVPYVQRRSPQVPETEFRQSPQEREALNQAGNCILCGACYAECNAVTVNP-EFLGPHA 181 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L + R L DSRD+ RLD+ P ++ C C CP+ ++P I +IK L Sbjct: 182 LAKGERLLKDSRDDTTSARLDHYHQPAVGVWACTRCYQCNYVCPQEVDPLDRITQIKSTL 241 Query: 255 LDRK 258 L +K Sbjct: 242 LQQK 245 >gi|330862918|emb|CBX73053.1| succinate dehydrogenase iron-sulfur subunit [Yersinia enterocolitica W22703] Length = 164 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 89/162 (54%), Positives = 112/162 (69%), Gaps = 1/162 (0%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELL 155 I + PLP + V++DLVVDM FY+Q+ I+P+L PA+E L Sbjct: 1 MYYASFSFAKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLNDGKNPPAREHL 60 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 QS E R+K+DGLYEC++CACCSTSCPS+WWN D+++GPA LL AYR+LIDSRD RL Sbjct: 61 QSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETTARL 120 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D+L+D F ++RCH+IMNC CPKGLNP KAI IK MLL R Sbjct: 121 DDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 162 >gi|319957049|ref|YP_004168312.1| succinate dehydrogenase subunit b [Nitratifractor salsuginis DSM 16511] gi|319419453|gb|ADV46563.1| succinate dehydrogenase subunit B [Nitratifractor salsuginis DSM 16511] Length = 251 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 8/251 (3%) Query: 14 RGKIWNAPTGEKNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 + KI + E + I ++NP D + P + TY + + G + L I+ +DP Sbjct: 3 KTKIITSDQSEGRELTFEILKYNPTDPESKPHLATYKIR-ETPGMTLFVALNMIREDLDP 61 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSH 131 L CR GICGSCGM ++G LAC D I + P+P +IKDL V Sbjct: 62 DLAFDFVCRAGICGSCGMMVNGKPLLACRTRTADYPEGKIRLMPMPAFELIKDLSVITGQ 121 Query: 132 FYSQH-RSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + R +E W+ E + L C+ C C +C + D Sbjct: 122 WMDRMSRRVESWVHKQEERNYSRIEAPVEPDRADATFELDRCIECGICVAACATALMRPD 181 Query: 189 RYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++G L + R+ D DE + + + D ++ C ++++C CPK L + I Sbjct: 182 -FVGAVGLNRIARFEADPHDERNDADFYELVGDDAGIFGCMSLLSCEDHCPKNLPLQEKI 240 Query: 248 AKIKMMLLDRK 258 A ++ L K Sbjct: 241 AYMRRKLASVK 251 >gi|237751038|ref|ZP_04581518.1| fumarate reductase iron-sulfur subunit [Helicobacter bilis ATCC 43879] gi|229373483|gb|EEO23874.1| fumarate reductase iron-sulfur subunit [Helicobacter bilis ATCC 43879] Length = 244 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 8/242 (3%) Query: 20 APTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + + R +++P + P Y ++ + V L I+ + DP L+ Sbjct: 2 SAETKGRTLTIRALKFDPQSATSKPHFREYKIE-EAHSMTVFIALGMIREQQDPDLSFDF 60 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQH 136 CR GICGSCGM I+G LAC +D I + PLP +IKDL V+ F Sbjct: 61 VCRAGICGSCGMMINGRPGLACRTLTQDFPDGVITLMPLPAFKLIKDLSVNTGDWFAGMT 120 Query: 137 RSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + +E W+ T + + E ++ L C+ C CC SC + D ++G A Sbjct: 121 KRVESWIHTQHKPDISKLEMPIEPEVADEVFELDRCIECGCCIASCAT-KVMRDDFVGAA 179 Query: 195 ILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + R++ID DE E + + + ++ C +++ C CPK L IA ++ Sbjct: 180 GMNRIVRFMIDPHDERTDEDYYELVGNDDGVFGCMSLIACHDVCPKELPLQSKIAYLRRK 239 Query: 254 LL 255 ++ Sbjct: 240 MV 241 >gi|325959837|ref|YP_004291303.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanobacterium sp. AL-21] gi|325331269|gb|ADZ10331.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanobacterium sp. AL-21] Length = 257 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 119/249 (47%), Gaps = 26/249 (10%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +++I+R+ + NP D + + G VL L YI+ D ++ SCR +CG+C Sbjct: 2 KFKIFRFK-EGMENPSYDKFEFE-PPTGMTVLGALFYIQQNFDDSIAFHYSCRGAVCGTC 59 Query: 89 GMNIDGTNTLACVKD-----------------------MKDIKGAIAVYPLPHMSVIKDL 125 GM I+ LAC D + I + PLPH+SV KDL Sbjct: 60 GMLINKVPRLACRTQLEPLIHGELKVPLSPYSAIEETGAWDPEEEILIEPLPHLSVKKDL 119 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +VDM F+ ++ +EP L+ P+P E L E ++++ C++CA C SCP Sbjct: 120 IVDMDRFFDYYQQVEPVLQPADPEPTLERLMDPEAVKELELYTNCILCALCFGSCPVDGA 179 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D YLGPA L + YR+ ID R+ RL + P + C NC + CPK + P Sbjct: 180 KPD-YLGPAALAKLYRFYIDPREGKNESRLLLADKPNGWWDCEFHGNCRRVCPKDVPPLI 238 Query: 246 AIAKIKMML 254 AIAK + L Sbjct: 239 AIAKAREKL 247 >gi|237752981|ref|ZP_04583461.1| fumarate reductase iron-sulfur subunit [Helicobacter winghamensis ATCC BAA-430] gi|229375248|gb|EEO25339.1| fumarate reductase iron-sulfur subunit [Helicobacter winghamensis ATCC BAA-430] Length = 248 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 10/242 (4%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 R+ +++P++ P Y + + + L IK + DP L+ C Sbjct: 6 QSSNRELTIRVLKFDPNSAVSKPHFVEYKL-KEAHSMTIFIVLNMIKEQYDPDLSFDFVC 64 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRS 138 R GICGSCGM I+G LAC KD I + PLP +IKDL VD ++++ + Sbjct: 65 RAGICGSCGMMINGRPRLACRTLTKDFPDGVITLMPLPAFKLIKDLSVDTGNWFNGMSKR 124 Query: 139 IEPWLKTVSPKPAKEL----LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +E W+ E Q++ L C+ C CC SC + D ++G A Sbjct: 125 VESWIHAQEKSEEHMCQLEDRVEPEVAQEVFELDRCIECGCCIASCGTKLMRED-FVGAA 183 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + R+++D DE + + + D ++ C +++ C CPK L IA ++ Sbjct: 184 GLNRVVRFMLDPHDERSDADYYELVGDDNGVFGCMSLLACHDVCPKNLPLQSKIAYLRRK 243 Query: 254 LL 255 + Sbjct: 244 MA 245 >gi|296274192|ref|YP_003656823.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] gi|296098366|gb|ADG94316.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] Length = 243 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 8/238 (3%) Query: 24 EKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + ++ ++NP +K P Y ++ + G + L+ I+ + D L+ CR Sbjct: 5 KGREVTIKVLKFNPRSKISKPHYVEYKLE-ETPGMTLFIALMKIREEHDADLSFDFVCRA 63 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 GICGSCGM ++G LAC + + I + P+P +IKDL V+ + + Sbjct: 64 GICGSCGMVVNGKPALACRTLIANYPDGVITLLPMPAFELIKDLSVNTGKWMDAMSNRVE 123 Query: 142 WLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + KP ++ D + L C+ C C SC + D ++GP L + Sbjct: 124 SWIHTNHKPDITKIEEKIDPDIADQTFELDRCIECGICVASCGTMLMRPD-FVGPVGLNR 182 Query: 199 AYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +D D E + + D ++ C ++M C CPK L IA ++ L+ Sbjct: 183 IARFEVDPHDNRTAEDFYELVGDDNGIFGCMSLMACEDHCPKHLPLQNKIAYLRRRLV 240 >gi|298528127|ref|ZP_07015531.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511779|gb|EFI35681.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfonatronospira thiodismutans ASO3-1] Length = 248 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 7/239 (2%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + I+R+NP + +P + ++ + + L I+ K DP+L CR GI Sbjct: 3 RKLTFSIFRYNPQEPGSSPGTQEFRLE-ETENLNLFVALNLIREKQDPSLQFDFCCRAGI 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CG+C M I+G LAC ++ I + PLP ++ DL VD ++ Sbjct: 62 CGACAMVINGRPGLACRTKTAELPDKIVLMPLPGFRLVGDLSVDTGAWFRSMNERVRAWI 121 Query: 145 TVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + D ++I L C+ C CC +C + SD ++G A + + R Sbjct: 122 HTDEDFDPDAPEVVMDNHVAEQIYELDRCIECGCCIGACATAQLRSD-FMGAAAMNRIAR 180 Query: 202 WLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +++D RD+ + + ++ C ++ C CPK L +A ++ + + + Sbjct: 181 FMLDPRDKRNNRDYFEIVGTDQGIFGCMGLLGCQDVCPKNLPLQDQLAHVRRKMGRQAL 239 >gi|308048180|ref|YP_003911746.1| succinate dehydrogenase subunit B [Ferrimonas balearica DSM 9799] gi|307630370|gb|ADN74672.1| succinate dehydrogenase subunit B [Ferrimonas balearica DSM 9799] Length = 244 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 9/240 (3%) Query: 24 EKNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 + I+R++P P + + ++ + G V L ++ + D +L CR Sbjct: 2 SARTLIFEIFRFDPQLPGDKPRTERFELE-ETPGMTVFIALNRLREEQDRSLQFDFVCRA 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIE 140 GICGSC M I+G TLAC I + PLP +I DL V+ F + Sbjct: 61 GICGSCAMVINGKPTLACRTLTSTFSSPIITLMPLPGFELIGDLSVNTGKFMRALSERVG 120 Query: 141 PWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 WL KP L++ D + I CV C CC C + + ++ Sbjct: 121 AWLHPTDAKPCINALEAPMDPAEAEAIYEADRCVECGCCVAGCATAQMR-ETFIAAVGFN 179 Query: 198 QAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + R+ +DSRD + + + D ++ C T++ C +CPK LN IA ++ LL Sbjct: 180 KVARFALDSRDARKPDDFYHIIGDEDGVFGCMTLLGCHDNCPKDLNHQAQIAYLRRQLLR 239 >gi|254458224|ref|ZP_05071650.1| fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] gi|207085060|gb|EDZ62346.1| fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] Length = 247 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + + I R++P + + P M+T+ V+ ++ G + L I+ D +L C Sbjct: 4 EKKARMLKINILRFDPHDPEDVPHMETFKVE-ESDGMTLYIVLNEIREHHDNSLKFDFVC 62 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 R GICGSC M ++G LAC + I + PLP +I DL + + Sbjct: 63 RAGICGSCSMLVNGRPKLACRTLTSKLGEHITLAPLPLFELIGDLSIYTGKWMRYLNEHL 122 Query: 141 PWLKTVSPKPAKEL----LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 K E +I L CV C CC C + + G L Sbjct: 123 ETWIHDKEKELDVDKLEERMEPELANEIYELDRCVECGCCVAGCGTIQMRP-TFTGAVGL 181 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R+ +D RD+ E + + D ++ C T++ C CPK L IA ++ M++ Sbjct: 182 NKIARYHLDPRDKRSDEEYYELIGDEDGIFGCMTLLGCEDVCPKDLPLQSKIAYLRRMMI 241 Query: 256 D 256 Sbjct: 242 K 242 >gi|220906711|ref|YP_002482022.1| succinate dehydrogenase iron-sulfur subunit [Cyanothece sp. PCC 7425] gi|219863322|gb|ACL43661.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cyanothece sp. PCC 7425] Length = 334 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 22/244 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I R + TY +D+ +LD L IK + D +L R++CR ICGSC Sbjct: 5 FKIIRQ--HLNNPAWVQTYTLDVSPT-ATILDCLNQIKWEQDGSLAFRKNCRNTICGSCA 61 Query: 90 MNIDGTNTLACVKDMKDIKG-----------------AIAVYPLPHMSVIKDLVVDMSHF 132 + I+G LAC + ++ + + PL +M VIKD VVDM F Sbjct: 62 LRINGRAALACQESVEQQLQKLASLDDNPNSAESDLPTLTLAPLGNMPVIKDFVVDMQSF 121 Query: 133 YSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + ++I+P++ T + P +E LQS ++R K+D + C++C C + C ++ ++ Sbjct: 122 WGNLKAIDPYISTAGRQIPEREFLQSPQERAKLDQMGNCILCGACYSDCNGREVSA-EFV 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GP L +AYR L D+RD+ RL+ + ++ C NC CP + P I +IK Sbjct: 181 GPHALAKAYRTLADNRDQATASRLEKYDGLAGVWGCTRCFNCNSVCPMDVAPLDQINQIK 240 Query: 252 MMLL 255 +L Sbjct: 241 GQIL 244 >gi|291277593|ref|YP_003517365.1| fumarate reductase iron-sulfur protein [Helicobacter mustelae 12198] gi|290964787|emb|CBG40643.1| fumarate reductase iron-sulfur protein [Helicobacter mustelae 12198] Length = 248 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 8/244 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 ++P E + R+ +++P + P Y + + + L I+ K DP L+ Sbjct: 2 SSPQTEGRIITIRVLKFDPQSAVSKPHFKEYQLQ-EAHSMTIFIALGMIREKFDPDLSFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-Q 135 CR GICGSCGM I+G LAC +D I + PLP +IKDL V+ +++ Sbjct: 61 FVCRAGICGSCGMMINGRPRLACKTLTQDFPDGVITLMPLPAFKLIKDLSVNTGEWFAGM 120 Query: 136 HRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + +E W+ + + E + Q++ L C+ C CC SC + D ++G Sbjct: 121 TKKVESWIHSNTTIDISKVEEKIDPDVAQEVFELDRCIECGCCIASCATKLMRED-FVGA 179 Query: 194 AILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + + R++ID D+ E + + + ++ C +++ C +CPK L IA ++ Sbjct: 180 AGMNRIVRFMIDPHDKRSDEDFYELVGNDDGVFGCMSLIACHDTCPKDLPLQSKIAYLRR 239 Query: 253 MLLD 256 ++ Sbjct: 240 KMIQ 243 >gi|224436830|ref|ZP_03657823.1| fumarate reductase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] gi|313143313|ref|ZP_07805506.1| succinate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] gi|313128344|gb|EFR45961.1| succinate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] Length = 247 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 8/243 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +A + R +++P + P Y V+ + V L I+ + DP L+ Sbjct: 2 SATQQKGRTLTIRALKFDPQSAVSKPHFREYQVE-EAHSMTVFIALGMIREQQDPDLSFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQ 135 CR GICGSC M I+G LAC +D I + PLP +IKDL V+ F Sbjct: 61 FVCRAGICGSCAMMINGRPRLACKTLTQDFPDGVITLMPLPAFKLIKDLSVNTGDWFAGM 120 Query: 136 HRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + +E W+ T + + E ++ L C+ C CC SC + D ++G Sbjct: 121 TKRVESWIHTQHKPDISKLEMPIEPEVADEVFELDRCIECGCCIASCAT-KVMRDDFVGA 179 Query: 194 AILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + + R++ID DE E + + + ++ C +++ C +CPK L IA ++ Sbjct: 180 AGMNRIVRFMIDPHDERTDEDYYELVGNDDGVFGCMSLIACHDTCPKELPLQSKIAYLRR 239 Query: 253 MLL 255 ++ Sbjct: 240 KMV 242 >gi|152992010|ref|YP_001357731.1| fumarate reductase iron-sulfur subunit [Sulfurovum sp. NBC37-1] gi|151423871|dbj|BAF71374.1| fumarate reductase, iron-sulfur subunit [Sulfurovum sp. NBC37-1] Length = 244 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 8/239 (3%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 E ++R+NP D P TY + + G + L+ I +K+D L+ CR GI Sbjct: 8 REIEITVFRYNPQDKDSKPEYQTYTL-TETPGMTLYIALIQIWSKMDHDLSFDFVCRAGI 66 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQHR-SIEPW 142 CGSC M ++G LAC + + I + PLP IKDL VD ++ + +E W Sbjct: 67 CGSCSMVVNGKPRLACKTRTNEFEDGKITLLPLPVFKHIKDLSVDTGNWMNDMSVKVESW 126 Query: 143 LKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + T E E ++ L C+ C C SC + D +LG L + Sbjct: 127 IHTQEETDLSRIEKPVDPEVADEVFELDRCIECGICLASCSTKVMRED-FLGAVGLNRTA 185 Query: 201 RWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L+D D+ + + + D ++ C ++M C CPK L IA ++ ++ K Sbjct: 186 RFLLDPHDQRTDADFYELVGDENGVFGCMSLMGCEDHCPKNLPLQTKIAYMRRKMVKVK 244 >gi|296271986|ref|YP_003654617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] gi|296096161|gb|ADG92111.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] Length = 241 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNKGN--PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 ++I R++P +K N + + + + + L I+ D L+ CR Sbjct: 2 SRELTFKILRYDPQDKENVRAYFEEFKIQ-EAPSMTIYIALTQIRESQDAGLSFDFVCRA 60 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 GICGSC M I+G LAC +D+ I + PLP ++IKDL V+ + + + +E Sbjct: 61 GICGSCAMMINGRPKLACRTLTRDLPKEIILLPLPTFNLIKDLSVNTGVWMDEMSKRVES 120 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E+ E + L C+ C CC C + + ++G L + Sbjct: 121 WVHSSHEVDIANIEMPIEPEVADAVFELDRCIECGCCVAGCGT-KLIKEDFVGAVGLNRI 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+ D DE + + + D ++ C T++ C +CPK L IA ++ L K Sbjct: 180 ARFECDPHDERTIEDYYELVGDDNGIFGCMTLLGCEDTCPKHLPLQTKIAYMRRKLATVK 239 >gi|157736560|ref|YP_001489243.1| fumarate reductase iron-sulfur subunit [Arcobacter butzleri RM4018] gi|157698414|gb|ABV66574.1| fumarate reductase, iron-sulfur protein [Arcobacter butzleri RM4018] Length = 243 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 T + + ++NP +K P Y ++ + G + L I+ +DP L+ C Sbjct: 3 TQKGREITISVLKFNPRSKVSKPHFVEYKLE-ETPGMTLFIALTQIRENLDPDLSFDFVC 61 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRS 138 R GICGSCGM ++G +LAC + + + + P+P +IKDL V+ + + Sbjct: 62 RAGICGSCGMVVNGKPSLACRTLVSNYPSGKLQLMPMPAFELIKDLSVNTGKWMDGMSKR 121 Query: 139 IEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W+ + + L C+ C C SC + + ++GP L Sbjct: 122 VESWIHNDHEVDISKLEDRIDPDVANDTFELDRCIECGICVASCGTALMRPN-FVGPVGL 180 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R+ ID D+ E + + D ++ C ++M C CPK L IA ++ L+ Sbjct: 181 NRVARFDIDPHDKRTAEDFYELIGDDDGIFGCMSLMACEDHCPKHLPLQNKIAYLRRKLV 240 >gi|315635723|ref|ZP_07890986.1| fumarate reductase subunit B [Arcobacter butzleri JV22] gi|315480020|gb|EFU70690.1| fumarate reductase subunit B [Arcobacter butzleri JV22] Length = 243 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 T + + ++NP +K P Y ++ + G + L I+ +DP L+ C Sbjct: 3 TQKGREITISVLKFNPRSKVSKPHFVEYKLE-ETPGMTLFIALTQIRENLDPDLSFDFVC 61 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRS 138 R GICGSCGM ++G +LAC + + + + P+P +IKDL V+ + + Sbjct: 62 RAGICGSCGMVVNGKPSLACRTLVSNYPSGKLQLMPMPAFELIKDLSVNTGKWMDAMSKR 121 Query: 139 IEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W+ + + L C+ C C SC + + ++GP L Sbjct: 122 VESWIHNDHEVDISKLEDRIDPDVANDTFELDRCIECGICVASCGTALMRPN-FVGPVGL 180 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R+ ID D+ E + + D ++ C ++M C CPK L IA ++ L+ Sbjct: 181 NRVARFDIDPHDKRTAEDFYELIGDDDGIFGCMSLMACEDHCPKHLPLQNKIAYLRRKLV 240 >gi|78044013|ref|YP_358936.1| fumarate reductase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996128|gb|ABB15027.1| fumarate reductase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 317 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 11/238 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++I R++ + + Y G +L L YIK IDPTLT SCR +CG+ Sbjct: 4 VTFKIRRFDGEKS---WVQEYQFPY-QPGKTILWALSYIKESIDPTLTFTASCRHAVCGA 59 Query: 88 CGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 C + ++G LAC + + + PL + VI+DLVVD + ++PW Sbjct: 60 CAVRVNGQAVLACETLLDKMLDRWETDTLLIEPLQNFKVIRDLVVDWETKVERLARVKPW 119 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + Q+ E+ +KI+ +C++C CC++ C N +L P I +A + Sbjct: 120 LIPRDEFSKETGCRQTPEEFKKINKNSDCILCGCCASECNKLSNNDSDFLEPFIFSKAQK 179 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ DSRD+ R+ + ++C C CPKGL+PA I+ I+ + I Sbjct: 180 FIADSRDKDPLSRISTAIN-NGAWKCMHCQECVTKCPKGLSPADDISFIRQFAIANGI 236 >gi|210134393|ref|YP_002300832.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori P12] gi|210132361|gb|ACJ07352.1| fumarate reductase [Helicobacter pylori P12] Length = 245 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F+ + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFFDMTKR 120 Query: 139 IEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + + ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITQPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|294921742|ref|XP_002778710.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239887430|gb|EER10505.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 196 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 125/167 (74%), Gaps = 2/167 (1%) Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 MNI+G N LAC++ ++ I + PLPH V+KDLV D+S+FY+Q++SIEPW + Sbjct: 1 MNINGKNGLACLQYIEPGPAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSIEPWLKRRRAK 60 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 KE QS EDR+K+DG+YEC++CACC TSCPSYWWN + YLGPA+L+QAYRW+ DSR Sbjct: 61 QPGEKEYYQSIEDREKLDGMYECILCACCMTSCPSYWWNPEYYLGPAVLMQAYRWIADSR 120 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 DEF ER+ + D RLYRCH IMNCT CPKGL+PAKAIAK+K + Sbjct: 121 DEFTTERMAWINDSMRLYRCHGIMNCTSCCPKGLDPAKAIAKMKAEI 167 >gi|315453813|ref|YP_004074083.1| fumarate reductase iron-sulfur protein [Helicobacter felis ATCC 49179] gi|315132865|emb|CBY83493.1| fumarate reductase iron-sulfur protein [Helicobacter felis ATCC 49179] Length = 242 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 8/238 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 R +++P + P Y + + + L I+ +DP L+ CR G Sbjct: 2 SRTITIRALKFDPQSAVSKPHFKEYQLQ-EIPSMTLFIALGIIRETLDPDLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEP 141 ICGSC M ++G LAC I + P+P +IKDL V+ F+ + +E Sbjct: 61 ICGSCAMMVNGRPRLACKTLTSSFSEGVITLMPMPSFPLIKDLSVNTGEWFFQMTKRVES 120 Query: 142 WLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W + ++ Q++ L C+ C CC +C + + +LG A L +A Sbjct: 121 WAHHRKEVDITQPEERIDPDEAQEVFELDRCIECGCCIAACGT-KLMRENFLGAAGLNRA 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R+LIDS DE E + + D ++ C +++ C +CPK + ++A ++ ++ Sbjct: 180 MRFLIDSHDERTDEDFYELVGDDDGIFGCMSLIGCHDTCPKEIPLKDSLADLRNRMVK 237 >gi|32266186|ref|NP_860218.1| fumarate reductase iron-sulfur subunit [Helicobacter hepaticus ATCC 51449] gi|32262236|gb|AAP77284.1| fumarate reductase [Helicobacter hepaticus ATCC 51449] Length = 247 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 8/243 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 +A + R +++P + P Y V+ + V L I+ + DP L+ Sbjct: 2 SATQQKGRTLTIRALKFDPQSAVSKPHFREYQVE-EAHSMTVFIALGMIREQQDPDLSFD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-Q 135 CR GICGSC M I+G LAC +D I + PLP +IKDL V+ +++ Sbjct: 61 FVCRAGICGSCAMMINGRPRLACKTLTQDFPDGVITLMPLPAFKLIKDLSVNTGEWFAGM 120 Query: 136 HRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + +E W+ T + + E ++ L C+ C CC SC + D ++G Sbjct: 121 TKRVESWIHTQHQPDISKLEVPIEPEVADEVFELDRCIECGCCIASCATKVMRED-FVGA 179 Query: 194 AILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + + R++ID DE E + + + ++ C +++ C +CPK L IA ++ Sbjct: 180 AGMNRIVRFMIDPHDERTDEDYYELVGNDDGVFGCMSLIACHDTCPKELPLQSKIAYLRR 239 Query: 253 MLL 255 +L Sbjct: 240 KML 242 >gi|308183991|ref|YP_003928124.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori SJM180] gi|308059911|gb|ADO01807.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori SJM180] Length = 245 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDSERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|254778902|ref|YP_003057007.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori B38] gi|254000813|emb|CAX28739.1| Fumarate reductase, iron-sulfur subunit [Helicobacter pylori B38] Length = 245 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + + ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITQPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|108562610|ref|YP_626926.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori HPAG1] gi|107836383|gb|ABF84252.1| fumarate reductase, iron-sulfur subunit [Helicobacter pylori HPAG1] Length = 245 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITNPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|317013609|gb|ADU81045.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Gambia94/24] Length = 245 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFLDMTKK 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|327291298|ref|XP_003230358.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like, partial [Anolis carolinensis] Length = 195 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 105/171 (61%), Positives = 132/171 (77%), Gaps = 4/171 (2%) Query: 32 IYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 +YRW+PD P M TY VDL+ CGPMVLD L+ IKN++DPTLT RRSCREGICGSC M Sbjct: 25 VYRWDPDKRGEKPRMQTYEVDLNKCGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAM 84 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 NI G NTLAC K + +YPLPHM V+KDLV D+S+FY+Q+++I+P+LK Sbjct: 85 NIGGGNTLACTKRIDTDLGRTTKIYPLPHMFVVKDLVPDLSNFYAQYKAIQPYLKKKDES 144 Query: 149 -KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+Q Sbjct: 145 RQGQEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQ 195 >gi|317009851|gb|ADU80431.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori India7] Length = 245 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + + ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITQPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|307636881|gb|ADN79331.1| succinate dehydrogenase iron-sulfur protein [Helicobacter pylori 908] gi|325995470|gb|ADZ50875.1| Succinate dehydrogenase iron-sulfur protein [Helicobacter pylori 2018] gi|325997068|gb|ADZ49276.1| Fumarate reductase iron-sulfur protein [Helicobacter pylori 2017] Length = 245 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITRPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|217031951|ref|ZP_03437453.1| hypothetical protein HPB128_3g70 [Helicobacter pylori B128] gi|298736867|ref|YP_003729397.1| fumarate reductase iron-sulfur protein [Helicobacter pylori B8] gi|216946420|gb|EEC25025.1| hypothetical protein HPB128_3g70 [Helicobacter pylori B128] gi|298356061|emb|CBI66933.1| fumarate reductase iron-sulfur protein [Helicobacter pylori B8] Length = 245 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|2058520|gb|AAC46065.1| FrdB [Helicobacter pylori] Length = 245 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITRPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|15611247|ref|NP_222898.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori J99] gi|12230115|sp|Q9ZMP1|FRDB_HELPJ RecName: Full=Fumarate reductase iron-sulfur subunit gi|4154696|gb|AAD05761.1| Fumarate reductase [Helicobacter pylori J99] Length = 245 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVNKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFSDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|193213883|ref|YP_001995082.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] gi|193087360|gb|ACF12635.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroherpeton thalassium ATCC 35110] Length = 249 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 11/245 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E +R++R+NP +P D++ + + G VL L YIK ++P L+ C G Sbjct: 3 EVKAITFRVFRFNPQIDEHPYYDSFEIPTER-GITVLRALDYIKQNLEPRLSFSSFCHAG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 ICGSC M I+G LAC + D K I V P+ ++ ++DL+VDM + Sbjct: 62 ICGSCSMKINGMAKLACTTQVWDELKNSVEKNVITVEPINNLPALRDLIVDMQPLVRKLE 121 Query: 138 SIEPWLKTVSPKPAK---ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + W++ P+ E S E+ + D +C++C C + CP+ + D Y+ P Sbjct: 122 TYLGWVEPAMPEQEMGKKECTVSEEEFRVYDPATDCILCGTCLSDCPALKADPD-YVSPP 180 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +LL+++R DSRD+ + ERL+ L + + C C +C K + +AI ++ + Sbjct: 181 VLLRSFRMNADSRDKSEEERLELLGELHGVMDCRGCNRCAFTCVKNIPIMQAIQSLRERV 240 Query: 255 LDRKI 259 + +K+ Sbjct: 241 MQKKL 245 >gi|317010469|gb|ADU84216.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori SouthAfrica7] Length = 245 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIIVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|332673032|gb|AEE69849.1| fumarate reductase subunit B [Helicobacter pylori 83] Length = 245 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPYFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|317179995|dbj|BAJ57781.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori F32] Length = 245 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|15644820|ref|NP_206990.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori 26695] gi|2494621|sp|O06914|FRDB_HELPY RecName: Full=Fumarate reductase iron-sulfur subunit gi|2313278|gb|AAD07258.1| fumarate reductase, iron-sulfur subunit (frdB) [Helicobacter pylori 26695] Length = 245 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITRPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERNDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|217034016|ref|ZP_03439438.1| hypothetical protein HP9810_891g20 [Helicobacter pylori 98-10] gi|216943524|gb|EEC22975.1| hypothetical protein HP9810_891g20 [Helicobacter pylori 98-10] gi|261837640|gb|ACX97406.1| fumarate reductase, iron-sulfur subunit [Helicobacter pylori 51] gi|261839053|gb|ACX98818.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori 52] gi|308063053|gb|ADO04940.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Sat464] gi|317177005|dbj|BAJ54794.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori F16] gi|317179412|dbj|BAJ57200.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori F30] gi|317181499|dbj|BAJ59283.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori F57] Length = 245 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|297379414|gb|ADI34301.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Helicobacter pylori v225d] Length = 245 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W+ + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWVHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|188526996|ref|YP_001909683.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Shi470] gi|188143236|gb|ACD47653.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Shi470] Length = 245 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M I+G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMINGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|254516532|ref|ZP_05128591.1| fumarate reductase iron-sulfur subunit [gamma proteobacterium NOR5-3] gi|219674955|gb|EED31322.1| fumarate reductase iron-sulfur subunit [gamma proteobacterium NOR5-3] Length = 256 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 6/243 (2%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + E L + R NP++ P Y V+L + G + L I+ + DP+L C Sbjct: 15 SSEAELFTLEVLRCNPEDSSVQPHWQRYSVEL-SEGMTLFIALSEIREQQDPSLQFDFVC 73 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSI 139 R GICGSC M I+G LAC + + + PLP ++I DL VD + + Sbjct: 74 RAGICGSCAMLINGRPGLACRTLLSSLPSPTRLAPLPGFALIGDLSVDTGRWMRSMSERL 133 Query: 140 EPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + W++ + + ++ + ++I L C+ C CC +C + D + Sbjct: 134 QIWVEGAATERDPCEVEEPMEPTLAEEIYELDRCIECGCCVAACGTAQMRDDFVGAVGLN 193 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 A L D + + D ++ C +++ C CPK L+ IA ++ +L Sbjct: 194 KLARLRLDPRDDRDDAAFYELIGDDDGVFGCMSLLGCEDVCPKDLSLGTQIAYLRRAMLR 253 Query: 257 RKI 259 + Sbjct: 254 EAL 256 >gi|254412619|ref|ZP_05026392.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196180354|gb|EDX75345.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 314 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 14/218 (6%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVK----------- 102 G +L+ L IK + D TL R++CR ICGSC M I+G + LAC + Sbjct: 2 EEGNTILECLNRIKWEQDGTLAFRKNCRNTICGSCAMRINGRSALACKENVGNELAQIPE 61 Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDR 161 + I + PL ++ VIKDLVVDM F+ ++EP++ T P +E LQS ++R Sbjct: 62 HHRPEIPEITIAPLGNLPVIKDLVVDMRSFWDNLEAVEPYVSTAGRTIPEREFLQSPQER 121 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 ++D C+MC C + C + + ++GP L +A R + DSRD RL+N Sbjct: 122 SRLDQNGNCIMCGACYSECNAREVDP-TFVGPHALAKAQRLVADSRDTAIESRLENYNQG 180 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C CP + P I KIK +L RK Sbjct: 181 TKGVWGCTRCLMCNAVCPMDVAPMDQIGKIKQEILTRK 218 >gi|315586189|gb|ADU40570.1| succinate dehydrogenase [Helicobacter pylori 35A] Length = 245 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSTVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|308061481|gb|ADO03369.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Cuz20] Length = 245 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGMITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|169832073|ref|YP_001718055.1| fumarate reductase iron-sulfur subunit [Candidatus Desulforudis audaxviator MP104C] gi|169638917|gb|ACA60423.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Desulforudis audaxviator MP104C] Length = 247 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 7/239 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R++P P T+++ + G + L I+ + DP+L CR Sbjct: 2 GRRLTFDIFRYHPFAAGTEPRTQTFHLR-ETPGMNIYAALTRIREEQDPSLMFDFVCRMA 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CGSCGM I+G LAC + I ++PLP ++ DL VD ++ Sbjct: 61 LCGSCGMVINGRPRLACKTFTSHLPDRITLFPLPVFQLVGDLSVDTGEWFRHVSLKTGAW 120 Query: 144 KTVSPKPA---KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 S E +E KI C+ C CC +C ++G A + + Sbjct: 121 LHTSRAFESGVPEERMDNETALKIYEAERCIECGCCIAACAKVH-IQRTFIGAAGINRLA 179 Query: 201 RWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+++D RDE Q + + L ++ C +M C +CPK L +A ++ + Sbjct: 180 RFMLDPRDERSQAQYFEVLGSGDGIFGCMGLMGCEDNCPKDLPLQLQLAYVRRKMAAAG 238 >gi|308182363|ref|YP_003926490.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori PeCan4] gi|308064548|gb|ADO06440.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori PeCan4] Length = 245 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ D L+ C Sbjct: 2 SDNERTIVIRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDSDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFGDMTKR 120 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++IDS DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|126178171|ref|YP_001046136.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanoculleus marisnigri JR1] gi|125860965|gb|ABN56154.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanoculleus marisnigri JR1] Length = 487 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 19/235 (8%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 R+ R++P P + Y V ++ G VL L ++++ DPTL R C G C Sbjct: 2 KTITLRVSRFDPAADAEPHFEEYIVQVN-EGARVLHALHAVRDEHDPTLAYRYCCGSGQC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC + +DG LAC+++ + + V PL + V+KDL+VD+ ++ I Sbjct: 61 GSCAVQVDGKPVLACMEEAR---DGMTVEPL-ALPVLKDLMVDLEPVIAKIARI------ 110 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 L + E+ + I L +C+ C CC ++CP+ + GP +L Q R +D Sbjct: 111 --CPAPDAALPAREEIEAIKPLRDCIECLCCVSACPALQVTD--FAGPTVLRQEMRLALD 166 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 RD +R+ + + L+ C T CT+ CPK ++ P KAI K++ + R + Sbjct: 167 PRDSG--DRITDAIEK-GLFYCTTCKRCTEVCPKEIDVPGKAIEKLREIANRRGL 218 >gi|322796013|gb|EFZ18637.1| hypothetical protein SINV_10360 [Solenopsis invicta] Length = 245 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 94/178 (52%), Positives = 118/178 (66%), Gaps = 4/178 (2%) Query: 25 KNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 L+ R+YRWNP+ P M + VDL+ CG MVLD L IK + DPTL+ RRSCREG Sbjct: 67 PKLQIVRVYRWNPETPNVKPYMQQFSVDLNKCGTMVLDVLTCIKAQHDPTLSFRRSCREG 126 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 ICG C MNI+G NTLAC+ +K+ + +YPLPH VI+DL+ DM F Q R I+P+L Sbjct: 127 ICGCCAMNINGVNTLACITKIKESPQPLIIYPLPHTYVIRDLIPDMGQFLEQFRKIDPYL 186 Query: 144 KTVSPKPAKELLQSHE---DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 K + Q + DR K+DGLYEC+MCACC+ SCP YWW D+YLGPA+LLQ Sbjct: 187 KRPAEDDFLGYRQILQSSRDRSKLDGLYECIMCACCTYSCPPYWWLGDKYLGPAVLLQ 244 >gi|317012034|gb|ADU82642.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori Lithuania75] Length = 245 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRS 138 R GICGSC M ++G LAC + I + P+P ++IKDL V+ F + Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR 120 Query: 139 IEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + + ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 121 VESWAHSKEEVDITQPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGM 179 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +A R++ID DE + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 180 NRAMRFMIDRHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRML 239 Query: 256 D 256 Sbjct: 240 K 240 >gi|163793946|ref|ZP_02187920.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [alpha proteobacterium BAL199] gi|159181057|gb|EDP65574.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [alpha proteobacterium BAL199] Length = 246 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 10/238 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A E I+R K +TY V VLD + +I+ +P L R Sbjct: 3 TATDSEGGTLAVEIWRG----KDAGQFETYTVP-QRANQTVLDVVTWIQRHAEPALAYRF 57 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CR G+CGSC M ++G C + + G + + PL ++ +KDL VDM+ F+ + Sbjct: 58 ACRVGVCGSCAMTVNGKPRWTCRTHVSKVAGEGALRIEPLRNLPRLKDLAVDMTPFFEKW 117 Query: 137 RSIEPWLKTVSPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + S + R+ D EC+ CA C ++C W D YLGPA Sbjct: 118 QRAQGRFTPTRTRNDPLTTVSPQSAGRKAADAGIECINCAVCYSACDVVGW-DDGYLGPA 176 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L +A+ + D RD + L + CHT +C + CP G+NP IA +K Sbjct: 177 ALNRAWTLVNDERDGDRAGVLKAASSGGGCHSCHTHGSCVEHCPVGINPTAGIAGLKR 234 >gi|117923744|ref|YP_864361.1| succinate dehydrogenase subunit B [Magnetococcus sp. MC-1] gi|117607500|gb|ABK42955.1| succinate dehydrogenase subunit B [Magnetococcus sp. MC-1] Length = 328 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 10/235 (4%) Query: 29 EYRIYR-WNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 RI R D+ D + V P VL+ L +K D +LT R+SCR ICG Sbjct: 7 TLRIQRNVRRDDGTLETKWDEFQVKATPLTP-VLNLLEDVKGNQDGSLTFRQSCRSAICG 65 Query: 87 SCGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 SC M I G LAC + D + + P + V+KDLVVD++ F+++ I+P+L Sbjct: 66 SCAMRIGGKTRLACKTQIGEVVDENNTVQIAPQQNSPVLKDLVVDITKFFNKVHQIKPYL 125 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + + + + +C+MCACC + C + SD ++GPA L +A+R++ Sbjct: 126 QEGAESATEVNDTAFDQVNHV---TQCIMCACCFSDC-TMAEVSDAFIGPAALAKAFRFV 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D R+ + ERL L ++ C C CPK + P +AI K++ +D Sbjct: 182 SDPREGNKRERLRVLSQDHGIWSCSRCTMCVMVCPKDVKPMEAIVKLRTRAMDAG 236 >gi|156937239|ref|YP_001435035.1| succinate dehydrogenase iron-sulfur subunit [Ignicoccus hospitalis KIN4/I] gi|156566223|gb|ABU81628.1| succinate dehydrogenase subunit B [Ignicoccus hospitalis KIN4/I] Length = 319 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++++ R++P K + Y V++D + + L ++ + DPTL R C+ G+CG+ Sbjct: 4 VKFKVARYDPATKAS-WWQEYEVEVDKYTSVAV-ALQRVREEKDPTLAYRPLCKMGVCGN 61 Query: 88 CGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 C + I+G LAC+ + ++ G I V PL +M V++DL+VD S F + S++P+L Sbjct: 62 CAVKINGRPALACLTNALEAAEEGNGTIVVEPLDNMPVVRDLIVDRSDFERRMFSVKPYL 121 Query: 144 KTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 K K + + +CV C C + CP N + + GP L++ YR Sbjct: 122 VPKEEVLKSDKWYPMLPAVQMDLWSSAQCVWCGVCYSVCPVAKVN-EEFAGPHALVKVYR 180 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + D RD ER+ + L+ C NC SCPK L +++ + Sbjct: 181 FAYDPRDALGRERVYL--NEKSLWMCVACKNCGTSCPKNLKHGLRFKRMRNDDVK 233 >gi|167946390|ref|ZP_02533464.1| succinate dehydrogenase iron-sulfur subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 152 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 83/152 (54%), Positives = 115/152 (75%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 K + V P P M VI+DLVVDM+ FY Q+R ++P+L P P E+LQS +R+++DGL Sbjct: 1 KEPVEVRPFPGMPVIRDLVVDMAAFYKQYRMVKPYLIRNEPIPEVEVLQSPAERERLDGL 60 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 YEC++C CCST+CPS+WWN D++LGPA LLQ++R+L DSRD+ + +RLD LE P++L+RC Sbjct: 61 YECILCGCCSTACPSFWWNPDKFLGPAALLQSWRFLADSRDQAEVDRLDGLEGPYKLFRC 120 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 HTIMNC CPK LNP +AI I+ ++L R + Sbjct: 121 HTIMNCVDVCPKRLNPTRAIGLIRELMLKRSV 152 >gi|290559350|gb|EFD92684.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 248 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 6/232 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + IYR++P+ + V + G +VLD + Y++N +DP+L +R +C+ C Sbjct: 3 KEIKLNIYRFDPEKDKEGHFQEFSVPVK-EGMVVLDAVHYVENNLDPSLAVRWNCKAARC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC I+G L C + I I+V P+ V+KDLV D+S + + I + Sbjct: 62 GSCAAEINGMPKLMCKTRVDSIGDKISVTPMKAFPVVKDLVTDVSRNWEIAKKIPAFTP- 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P + + D + C+ C C C + Y+GP +++A + Sbjct: 121 -KPNLKEPWVIDEIDVSRSREFRNCIECFLCQDVCHVIREHDKNYIGPRFMVKAASLDMH 179 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLD 256 D +R L + C+ C CP+ + AI K ++D Sbjct: 180 PLDNI--DRSKFLHEEGGAGYCNITKCCQSVCPEHIAITDNAIIPEKESIVD 229 >gi|299134756|ref|ZP_07027948.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] gi|298590566|gb|EFI50769.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] Length = 248 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 9/227 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +++R + D T+ V VLD + I+ D TL+ R +CR G+CGSC Sbjct: 19 VQVWRGDKD----GAFQTFEVPA-RANQTVLDVVTEIQRTQDETLSYRFACRVGMCGSCA 73 Query: 90 MNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M ++ C + G + + PL ++ V+KDL VDM F+++ R + + Sbjct: 74 MVVNERPRWTCRTRVDELEGGPLKLEPLRNLPVVKDLTVDMEPFFNKWRDAHGYFEPGEN 133 Query: 149 KPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 PA + S +RQ +D EC+ C C ++C WN D YLGPA L +A+ + D Sbjct: 134 PPADFAVVEPSSPERQAVDEGIECINCGVCYSACDVVSWNED-YLGPAALNRAWTLVNDV 192 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RD Q RL + + CH+ M+CT+ CPK L+P +IA +K Sbjct: 193 RDRGQDARLTAVTGDAGCHSCHSHMSCTEFCPKHLSPTFSIAGLKRA 239 >gi|109946984|ref|YP_664212.1| fumarate reductase iron-sulfur subunit [Helicobacter acinonychis str. Sheeba] gi|109714205|emb|CAJ99213.1| fumarate reductase iron-sulfur protein [Helicobacter acinonychis str. Sheeba] Length = 245 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%) Query: 23 GEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + R+ +++P + P Y + + + L I+ DP L+ CR Sbjct: 3 DNERTIIVRVLKFDPQSTVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVCR 61 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRSI 139 GICGSC M ++G LAC + I + P+P ++IKDL V+ F + + Sbjct: 62 AGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKRV 121 Query: 140 EPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 E W + E ++ Q++ L C+ C CC SC + + ++G A + Sbjct: 122 ESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGMN 180 Query: 198 QAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + R++IDS D + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 181 RVMRFMIDSHDGRSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK 240 >gi|118474349|ref|YP_891616.1| fumarate reductase iron-sulfur subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413575|gb|ABK81995.1| fumarate reductase iron-sulfur protein [Campylobacter fetus subsp. fetus 82-40] Length = 246 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 8/245 (3%) Query: 20 APTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + R +++NP +K P Y ++ + G + L I+ K DP L+ Sbjct: 4 QELAMSRKIKIRAFKYNPLSKVSKPHFAEYELE-ETDGMTLFIALNQIREKFDPGLSFDF 62 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QH 136 CR GICGSCGM ++G LAC KD I + P+P ++KDL VD ++ + Sbjct: 63 VCRAGICGSCGMVVNGRPQLACRTLTKDYPSGVIELMPMPAFKLLKDLSVDTGNWMNAMS 122 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + +E W+ T E E Q+ L C+ C C SC + D ++G Sbjct: 123 KKVESWIHTNKETDISKMEEKVDPEAAQETFELDRCIECGICVASCGTALMRPD-FIGAV 181 Query: 195 ILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + R+ +D D + + + D ++ C +++ C +CPK L IA ++ Sbjct: 182 GLNRVARFKVDPLDNRSDDDFYELVGDDNGVFGCMSLLGCEDNCPKHLPLQSKIAYMRRK 241 Query: 254 LLDRK 258 L K Sbjct: 242 LATVK 246 >gi|258511828|ref|YP_003185262.1| succinate dehydrogenase iron-sulfur subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478554|gb|ACV58873.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 262 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 10/251 (3%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKI 70 + A I R + P + + V + C + + K + Sbjct: 8 VQQAQADSGRKVHLIIERQD-TPDSEPYWEEFEVPYRPGMNVIACLMEIQRNPVNKKGEP 66 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 +T +C E +CG+C M I+ AC + ++ I + P+ V++DLVVD S Sbjct: 67 VAPVTWEMNCLEEVCGACTMVINNKPRQACSALVDKLQQPIRIRPMRTFPVVRDLVVDRS 126 Query: 131 HFYSQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + I+ W+ S E++Q L C C C +CP+ + Sbjct: 127 RMFEALKRIKAWIPIDGTHDLGPGPRMSSEEQQIAYELSRCFTCGACVEACPNVN-DKTS 185 Query: 190 YLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++GP + QA + + + + ERL L ++ C NC + CPKG+ +IA Sbjct: 186 FIGPFAISQARLFNMHPTGKMNKEERLQALMGEGGIFECGNAQNCVEVCPKGIPLTTSIA 245 Query: 249 KIKMMLLDRKI 259 + + R I Sbjct: 246 VMNREVTYRAI 256 >gi|312136456|ref|YP_004003793.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanothermus fervidus DSM 2088] gi|311224175|gb|ADP77031.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanothermus fervidus DSM 2088] Length = 483 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 12/232 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + ++R++P P +TY + VLD L I K + R SC+ G CGSC Sbjct: 2 KIHVFRYDPKVDNKPYYETYEIS-KKEKMTVLDALNTINAKYGANIAFRSSCKAGQCGSC 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G LAC ++++ + PL + VIKDL+VD ++ R + +L + Sbjct: 61 AVKVNGKPVLACKHEVENNAI---IEPLD-LPVIKDLIVDRKEMENKAREMHLYLHSKKT 116 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K + + E + C+ C C T+CP S +YLGP + ++ D RD Sbjct: 117 KDLR--IIKPEKYWDSRKVRGCIECFSCLTACPVIKETS-KYLGPYHMNYIAKFAFDPRD 173 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 E+ +Y C T C + CPKGLN P AI K++ + ++ Sbjct: 174 EYNRVSQGI---KKGIYYCTTCGACEEVCPKGLNLPGDAIEKLRELAYKEEM 222 >gi|163854704|ref|YP_001629002.1| fumarate reductase iron-sulfur protein [Bordetella petrii DSM 12804] gi|163258432|emb|CAP40731.1| fumarate reductase iron-sulfur protein [Bordetella petrii] Length = 265 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 10/235 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + ++R + + V VLD +I+ +D TL+ R +CR G+CGSC Sbjct: 12 QVSVWRG----GADGGFQVFEVP-RRDNQTVLDVATHIQRHLDSTLSYRYACRVGMCGSC 66 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE--PWLK 144 M ++G C + G I + PL ++ ++KDLV DM+ F+ + + + Sbjct: 67 AMTVNGVARWTCRTHVSRVARNGRIELAPLSNLPIVKDLVTDMAPFFDKWQRAQGRYTGP 126 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P + S R+ D EC+ C C SC W ++LGPA L +A+ + Sbjct: 127 AGRHDPVARVDPSSPRRRAADAGIECIGCGVCYASCDVVSWKP-QFLGPAALNRAWTLVN 185 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D RD RL + + CHT +CT CPKG+ P AIA +K M + Sbjct: 186 DERDTGGARRLAAVAGDAGCHSCHTQGSCTVRCPKGIAPTAAIAGLKRMAARAAL 240 >gi|157164335|ref|YP_001467268.1| fumarate reductase iron-sulfur subunit [Campylobacter concisus 13826] gi|112801934|gb|EAT99278.1| fumarate reductase iron-sulfur subunit [Campylobacter concisus 13826] Length = 239 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKITIKAFKYNPLSKVSKPHFATYELE-ETDGMTLFIALNQIREKFDPDLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++G +LAC KD + I + PLP ++KDL VD ++ + + +E Sbjct: 61 ICGSCGMLVNGKPSLACRTLTKDFESGVIELMPLPVFKLLKDLSVDTGNWMNAMSKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T + E Q++ L C+ C C SC + D ++G L + Sbjct: 121 WIHTDHETDISKLEEKVEPEVAQEVFELDRCIECGICVASCGTAIMRPD-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ ID+ D+ E + + D ++ C T++ C +CPK L IA ++ + Sbjct: 180 ARFKIDALDKRTDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSRIAYMRRKMA 236 >gi|154175345|ref|YP_001408712.1| fumarate reductase iron-sulfur subunit [Campylobacter curvus 525.92] gi|153793223|gb|ABS50426.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Campylobacter curvus 525.92] Length = 239 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P +Y ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKITIKAFKYNPQSKISKPHFASYELE-ETDGMTLFIALNVIREKFDPDLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++G +LAC KD I + PLP ++KDL VD ++ + R +E Sbjct: 61 ICGSCGMLVNGKPSLACRTLTKDFPSGVIELMPLPVFKLLKDLSVDTGNWMNAMSRRVES 120 Query: 142 WLKTV--SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + + E E Q++ L C+ C C +C + D ++G L + Sbjct: 121 WIHSDHVTDISKLEEKVEPEVAQEVFELDRCIECGICVAACGTAIMRPD-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ ID+ D+ E + + D ++ C T++ C +CPK L IA ++ + Sbjct: 180 ARFKIDALDKRTDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSRIAYMRRKMA 236 >gi|222823372|ref|YP_002574946.1| fumarate reductase, iron-sulfur subunit [Campylobacter lari RM2100] gi|222538594|gb|ACM63695.1| fumarate reductase, iron-sulfur subunit [Campylobacter lari RM2100] Length = 241 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 R +++NP +K P TY ++ + + L I+ K+D L+ CR G Sbjct: 2 SRKLTIRAFKYNPLSKISKPHFVTYELE-ETPFMTIFVCLTQIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + PLP IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGKPKLACKTLTKDYPDGVIELMPLPAFRHIKDLSVNTGEWFDGMCKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E + L C+ C C SC + D ++ LL+ Sbjct: 121 WVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPD-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 ARYLQDPHDHRTIEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 239 >gi|257460652|ref|ZP_05625753.1| fumarate reductase iron-sulfur subunit [Campylobacter gracilis RM3268] gi|257441983|gb|EEV17125.1| fumarate reductase iron-sulfur subunit [Campylobacter gracilis RM3268] Length = 245 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKITIKAFKYNPLSKISKPHFATYELE-ETDGMTLFIALNVIREKFDPELSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++G LAC KD I + PLP ++KDL VD ++ + + +E Sbjct: 61 ICGSCGMLVNGKPQLACRTLTKDYPDGVIELMPLPVFKLLKDLSVDTGNWMNAMSKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T + E Q++ L C+ C C +C D Y+G + + Sbjct: 121 WIHTDHETDISKLEEKVEPEVAQEVFELDRCIECGICVAACGVAIMRKD-YIGAVGINRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+ ID+ D+ E + + D ++ C T++ C +CPK L IA I+ L + Sbjct: 180 ARFQIDALDKRSDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSKIAYIRRKLAAQG 239 >gi|167968955|ref|ZP_02551232.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis H37Ra] Length = 181 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 8/179 (4%) Query: 84 ICGSCGMNIDGTNTLACVKDM-------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CGS M I+G N LAC M K + V P+ + V KDLVVDM F+ + Sbjct: 1 MCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAY 60 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y GPA + Sbjct: 61 RAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 120 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 178 >gi|269954975|ref|YP_003324764.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] gi|269303656|gb|ACZ29206.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] Length = 264 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 37/257 (14%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 + R P P +T+ V D+ VLD L +IK+ +P+LT R SCR G+CGSCG+ Sbjct: 10 VTRQEP--GAAPRDETFDVPFDD-RTTVLDALDWIKDHTEPSLTFRWSCRMGVCGSCGVM 66 Query: 92 IDGTNTLACVKDMK-DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 ++G L C + I V P+ H +V +DL VD F ++ R ++PW+ Sbjct: 67 VNGRPLLGCETTVAGYRTSGITVGPMAHATVQRDLAVDTDEFLAKLRGVQPWMLPTPATE 126 Query: 151 AKELLQSHE-------------------------------DRQKIDGLYECVMCACCSTS 179 + E + E + + GL +C+ C C + Sbjct: 127 SAEPAEPAEPGGSSGPSGAVEAPAGPRTEDVLAVHSQTPGEVEAYKGLSQCIDCMLCYAA 186 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCP 238 CP +D + GPA + A RW +DSRDE R L E+ ++ C + CT++CP Sbjct: 187 CPVLDDVAD-FTGPAAIATARRWDLDSRDEGNETRFSLLAENETGIWPCIQVGACTRACP 245 Query: 239 KGLNPAKAIAKIKMMLL 255 KG++PA+AI + + Sbjct: 246 KGVDPARAIRDYQREAM 262 >gi|170745271|ref|YP_001766728.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium radiotolerans JCM 2831] gi|170658872|gb|ACB27926.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium radiotolerans JCM 2831] Length = 251 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 5/208 (2%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAV 113 VLD + I+ DPTL R +CR G+CGSCGM ++G C + + + + Sbjct: 38 NQTVLDVVTEIQRDQDPTLAYRFACRVGMCGSCGMTVNGRPRWTCRTRVAAVAPDGVLTL 97 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE--DRQKIDGLYECV 171 PL ++ V+KDL VDM F+ + R + + P E RQ++D EC+ Sbjct: 98 EPLRNLPVVKDLAVDMEPFFEKWRRAHGYFEPGENPPDDFATVEPESPARQEVDAGIECI 157 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C +C WN D YLGPA L +A+ + D RD RL + + CH+ M Sbjct: 158 NCGVCYAACDLVTWNPD-YLGPAALNRAWTLVNDVRDRDGAGRLAAVAGDAGCHSCHSHM 216 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +CT+ CPKGL+P +IA +K + Sbjct: 217 SCTEHCPKGLSPTFSIAGLKRETGKAAL 244 >gi|255323374|ref|ZP_05364505.1| fumarate reductase iron-sulfur subunit [Campylobacter showae RM3277] gi|255299411|gb|EET78697.1| fumarate reductase iron-sulfur subunit [Campylobacter showae RM3277] Length = 239 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P +Y ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKITIKAFKYNPLSKISKPHFASYELE-ETDGMTLFIALNQIREKFDPDLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++GT LAC KD G I + PLP ++KDL VD ++ + + +E Sbjct: 61 ICGSCGMLVNGTPKLACRTLTKDYPGGVIELMPLPVFKLLKDLSVDTGNWMNAMSKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T + E Q++ L C+ C C +C + D ++G L + Sbjct: 121 WIHTDHETDISKLEEKVEPEVAQEVFELDRCIECGICVAACGTAIMRPD-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ ID+ D+ E + + D ++ C T++ C +CPK L IA ++ + Sbjct: 180 ARFKIDALDKRTDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSRIAYMRRKMA 236 >gi|223039286|ref|ZP_03609575.1| fumarate reductase iron-sulfur subunit [Campylobacter rectus RM3267] gi|222879347|gb|EEF14439.1| fumarate reductase iron-sulfur subunit [Campylobacter rectus RM3267] Length = 239 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKITIKAFKYNPLSKISKPHFATYELE-ETDGMTLFIALNVIREKFDPELSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++GT LAC KD I + PLP ++KDL VD ++ + + +E Sbjct: 61 ICGSCGMLVNGTPKLACRTLTKDYPNGVIELMPLPVFKLLKDLSVDTGNWMNAMSKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T + E Q++ L C+ C C +C + D ++G L + Sbjct: 121 WIHTDHETDISKLEEKVEPEVAQEVFELDRCIECGICVAACGTAIMRPD-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ ID+ D+ E + + D ++ C T++ C +CPK L IA ++ + Sbjct: 180 ARFKIDALDKRTDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSRIAYMRRKMA 236 >gi|303229800|ref|ZP_07316580.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella atypica ACS-134-V-Col7a] gi|302515560|gb|EFL57522.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella atypica ACS-134-V-Col7a] Length = 320 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYE-PDRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWESKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTARQDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAYD-NGLWKCVHCMNCISRCPKHLKPAQDISNMRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|330470013|ref|YP_004407756.1| fumarate reductase iron-sulfur subunit [Verrucosispora maris AB-18-032] gi|328812984|gb|AEB47156.1| fumarate reductase iron-sulfur subunit [Verrucosispora maris AB-18-032] Length = 355 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 12/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +++RI+R + D + Y V+++ G +VLD + ++ P L R +C+ G Sbjct: 2 GTKRQFRIWRGDADGGE---LQDYAVEVN-EGEVVLDVIHRLQATDAPDLACRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC M I+G L C+ M + V PL VI+DLV D+S Y + R + Sbjct: 58 CGSCSMEINGMPKLGCMTRMSTFEENETVTVTPLRTFPVIRDLVTDVSFNYEKARETPAF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQA 199 + D ++ +C+ C C T C + D + GP ++A Sbjct: 118 APPAD-LAPGDYRMQQVDVERSQEFRKCIECFLCQTVCHVIRDHDDNKPAFSGPRYFIRA 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIKMMLLDRK 258 + D+ +R + + L C+ CT+ CP+ + I +K ++DR+ Sbjct: 177 AELDMHPLDDRT-DRKEYAQSEQGLGFCNITKCCTEVCPEHIKITDNGIIPMKERVVDRR 235 >gi|294792555|ref|ZP_06757702.1| fumarate reductase, iron-sulfur subunit [Veillonella sp. 6_1_27] gi|294456454|gb|EFG24817.1| fumarate reductase, iron-sulfur subunit [Veillonella sp. 6_1_27] Length = 320 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYE-PDRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWESKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTARQDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAFD-NGLWKCVHCMNCISRCPKHLKPAQDISNLRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|1619247|emb|CAA69873.1| succinate dehydrogenase subunit B [Paenibacillus macerans] Length = 261 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 10/245 (4%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTL 74 ++ I R + D P + + +D + + K + + Sbjct: 11 KQKSGKKVKFIITRQD-DPNSQPYTEEFELDYRPNMNVISALMEIQRNPVNQKGEHTAPV 69 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 +C E +CG+C M I+G AC + ++ + + P+ V++DLV+D S ++ Sbjct: 70 CWESNCLEEVCGACSMVINGKPRQACAALIDQLEQPVRIEPMRTFPVVRDLVIDRSRMFN 129 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ + E RQ L +C+ C C +CP+ +D ++GP Sbjct: 130 ALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNEKTD-FIGP 188 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + Q + ERLD L + + C NC ++CPKG+ +IA++ Sbjct: 189 AAISQVRLFNAHPTGAMNADERLDALMEDGGIEGCGNSQNCVRACPKGIPLTTSIAEMNR 248 Query: 253 MLLDR 257 R Sbjct: 249 DTTKR 253 >gi|154148968|ref|YP_001406422.1| fumarate reductase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] gi|153804977|gb|ABS51984.1| fumarate reductase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] Length = 243 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 8/239 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + G + L YI+ +DP+L+ CR G Sbjct: 2 SRKITIKAFKYNPLSKISKPHFATYELE-ETDGMTIFIALNYIREHLDPSLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+GT LAC KD I + PLP +IKDL V+ + + +E Sbjct: 61 ICGSCAMVINGTPKLACRTLTKDYPDGVIELMPLPVFKLIKDLSVNTGEWMAHMNERVES 120 Query: 142 WLKTVSPKPAKELLQSHE--DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + + + E ++ L C+ C C SC + D ++G L + Sbjct: 121 WVHSDKKVDISRIEEPVEPSSAEETFELDRCIECGICVASCGTAVMRKD-FVGAVGLNRI 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+ +D+ D+ + + + D ++ C +++ C +CPK L IA ++ L Sbjct: 180 ARFKVDAHDQRTDDDFYELVGDDNGVFGCMSLLGCEDNCPKHLPLQSKIAYVRRKLATA 238 >gi|291296904|ref|YP_003508302.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Meiothermus ruber DSM 1279] gi|290471863|gb|ADD29282.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Meiothermus ruber DSM 1279] Length = 258 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 15/236 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +RI+R + + + Y +++ G +VLD + I+ + P L R +C+ G CG Sbjct: 3 TVTFRIFRGDRNGGE---LKDYTIEV-QEGMVVLDAIHQIQAEQAPDLACRWNCKAGKCG 58 Query: 87 SCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 SCG ++G TL C+ + I + V P+ VI+DL D+ Y ++ I+P+ Sbjct: 59 SCGAEVNGKPTLMCMTRLDTIDTSKPVTVRPMKTFPVIRDLATDVKWNYEANKKIKPF-- 116 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR--YLGPAILLQAYRW 202 +P P + + ED ++ +C+ C C C + ++ ++GP +L++ Sbjct: 117 --TPAPNTDWIMFQEDVDRVQEFRKCIECFLCQNVCHVLREHDEKTGFIGPRLLVRTASL 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDR 257 + D RLD L++ + C+ CT+ CP+ ++ AI +K ++D Sbjct: 175 EMHPLDV--ENRLDMLKNEGGIGYCNITKCCTEVCPEHIHITDNAIIPLKERVVDE 228 >gi|303231690|ref|ZP_07318413.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella atypica ACS-049-V-Sch6] gi|302513639|gb|EFL55658.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella atypica ACS-049-V-Sch6] Length = 320 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYEA-DRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWEAKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTARQDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAYD-NGLWKCVHCMNCISRCPKHLKPAQDISNMRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|253575351|ref|ZP_04852689.1| succinate dehydrogenase subunit B [Paenibacillus sp. oral taxon 786 str. D14] gi|251845348|gb|EES73358.1| succinate dehydrogenase subunit B [Paenibacillus sp. oral taxon 786 str. D14] Length = 261 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 12/244 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KID 71 +A ++ I R + D P + + +D G V+ L+ I+ + Sbjct: 9 SAKQQTAKKVKFIITRQD-DPNSKPYTEEFELDY-RPGMNVISALMEIQRNPVNRKGEHT 66 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 + +C E +CG+C M I+G AC + +++ I + P+ V++DLV+D S Sbjct: 67 SPVCWESNCLEEVCGACSMVINGKPRQACAALIDNLEQPIRIEPMRTFPVVRDLVIDRSR 126 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 ++ + ++ W+ + E RQ L +C+ C C +CP+ +D + Sbjct: 127 MFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNEKTD-F 185 Query: 191 LGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +GPA + Q + E ERL+ L +P + C NC ++CPKG+ +IA+ Sbjct: 186 IGPAAISQVRLFNAHPTGEMNAEERLEALMEPGGIEGCGNSQNCVRACPKGIPLTTSIAE 245 Query: 250 IKMM 253 + Sbjct: 246 MNKA 249 >gi|282849616|ref|ZP_06259000.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella parvula ATCC 17745] gi|282580553|gb|EFB85952.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella parvula ATCC 17745] Length = 320 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYE-PDRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWESKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTAREDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAFD-NGLWKCVHCMNCISRCPKHLKPAQDISNLRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|269798760|ref|YP_003312660.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella parvula DSM 2008] gi|294794346|ref|ZP_06759482.1| fumarate reductase, iron-sulfur subunit [Veillonella sp. 3_1_44] gi|269095389|gb|ACZ25380.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella parvula DSM 2008] gi|294454676|gb|EFG23049.1| fumarate reductase, iron-sulfur subunit [Veillonella sp. 3_1_44] Length = 320 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYE-PDRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWESKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTAREDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAFD-NGLWKCVHCMNCISRCPKHLKPAQDISNLRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|208434142|ref|YP_002265808.1| fumarate reductase, iron-sulfur subunit [Helicobacter pylori G27] gi|208432071|gb|ACI26942.1| fumarate reductase, iron-sulfur subunit [Helicobacter pylori G27] Length = 234 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 8/228 (3%) Query: 35 WNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNID 93 ++P + P Y + + + L I+ DP L+ CR GICGSC M ++ Sbjct: 4 FDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVCRAGICGSCAMMVN 62 Query: 94 GTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPWLKTVSPKP- 150 G LAC + I + P+P ++IKDL V+ F + +E W + Sbjct: 63 GRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKRVESWAHSKEEVDI 122 Query: 151 -AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 E ++ Q++ L C+ C CC SC + + ++G A + +A R++IDS DE Sbjct: 123 TKPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPN-FIGAAGMNRAMRFMIDSHDE 181 Query: 210 FQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + D ++ C +++ C +CPK L +IA ++ +L Sbjct: 182 RSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK 229 >gi|16331735|ref|NP_442463.1| succinate dehydrogenase iron-sulfur subunit [Synechocystis sp. PCC 6803] gi|1673321|dbj|BAA10533.1| succinate dehydrogenase iron-sulfur protein [Synechocystis sp. PCC 6803] Length = 245 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 17/239 (7%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 +I R G+ YY+D+D +L+ L IK + D +L R++CR ICGSC + Sbjct: 6 KIQRQL--TDGDRHWQNYYLDVD-PQTSILNCLNQIKWQQDGSLAFRKNCRNAICGSCAV 62 Query: 91 NIDGTNTLACVKDMKDIKGAI-----------AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 ++ LAC + +K + + + PL ++ VIKDLVVDM F++ ++ Sbjct: 63 RVNDRPVLACKESIKSLGQWLAESNQENTGVFTISPLGNLPVIKDLVVDMEKFFAGLDAV 122 Query: 140 EPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+L + E QS E R ++ + CV+C C + C + ++ ++GP L + Sbjct: 123 YPYLINKHQGEKGAEFSQSPEQRAALNDVSNCVLCGVCYSDCDAKK-KNENFVGPHALAK 181 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 A R ++D+RD RL+ L D ++ C+ C+ SCP G+ P I +K+ L D Sbjct: 182 ANRLILDNRDMATKARLEALGKDKQGVWGCNNCRMCSDSCPTGVAPLSQIEALKIRLFD 240 >gi|77465164|ref|YP_354667.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides 2.4.1] gi|126464625|ref|YP_001045738.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Rhodobacter sphaeroides ATCC 17029] gi|221369159|ref|YP_002520255.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides KD131] gi|332560769|ref|ZP_08415087.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides WS8N] gi|77389582|gb|ABA80766.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides 2.4.1] gi|126106436|gb|ABN78966.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides ATCC 17029] gi|221162211|gb|ACM03182.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides KD131] gi|332274567|gb|EGJ19883.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides WS8N] Length = 242 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 9/231 (3%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 I+R + V VLD + +I+ +DPTLT R +CR G+CGSC Sbjct: 10 VSIWRG---TGTTGAFQGFEVPRQGS-QTVLDVVSWIQQNLDPTLTYRYACRVGMCGSCA 65 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M ++G C + + + + PL ++ VIKDL DM F+ + E Sbjct: 66 MMVNGVPRWTCRTHVNKVDQGGALTIGPLRNLPVIKDLAADMDPFFEKWVKAEGLFHPAR 125 Query: 148 PKPAKELLQSH--EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + E R+ D EC+ C+ C +C + N D YLGPA L +A+ + D Sbjct: 126 TRHEEVARVDPASEARRTADRAIECINCSVCYAACDTVAGNPD-YLGPAALNRAWSVVND 184 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RD + E L + + CH+ +CT+ CP L+P +IA +K Sbjct: 185 ERDAGRAEVLAAVSVSGGCHNCHSQGSCTRHCPNELSPLDSIAGLKRETAR 235 >gi|163783502|ref|ZP_02178493.1| gamma-glutamyl kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159881266|gb|EDP74779.1| gamma-glutamyl kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 232 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 11/226 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++R+NPD+ DT+ VD + G L IK DP+LT R CR GICG+ Sbjct: 3 VRLKVFRYNPDDGRKGY-DTFEVDYE-EGMTFLTVFHRIKENHDPSLTFRHFCRAGICGT 60 Query: 88 CGMNIDGTNTLACV---KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 C + I+G LAC I V P+ +IKDL VD + +S W+ Sbjct: 61 CTVFINGFPKLACKEQVLPYVLTGEEIVVEPMEKFPLIKDLAVDQGDVVDRMKSFHTWI- 119 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ E ++I+ +C++C C + CP + Y GP + YR+L Sbjct: 120 ---DNYKDDVRIPPEVSKRIEKAADCILCCACQSYCP--QVLEEDYAGPLFFAKLYRFLE 174 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 D RD + RL LY C + C SCPK + PA I ++ Sbjct: 175 DPRDGNREFRLKEALVDGHLYHCLSCDKCNSSCPKEVEPATLIREL 220 >gi|322379457|ref|ZP_08053827.1| fumarate reductase iron-sulfur subunit [Helicobacter suis HS1] gi|322380837|ref|ZP_08054935.1| fumarate reductase iron-sulfur subunit [Helicobacter suis HS5] gi|321146744|gb|EFX41546.1| fumarate reductase iron-sulfur subunit [Helicobacter suis HS5] gi|321148166|gb|EFX42696.1| fumarate reductase iron-sulfur subunit [Helicobacter suis HS1] Length = 242 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 8/236 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 R+ +++P + P Y ++ + + L I+ K+DP L+ CR G Sbjct: 2 SRTITIRVLKFDPQSAVSKPHFKEYKLE-EIPSMTLFIALGIIREKMDPDLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC + I + P+P +IKDL V+ +++Q ++ Sbjct: 61 ICGSCAMMINGRPRLACKTLTSNFSEDTITLMPMPSFPLIKDLSVNTGEWFAQMDARVQS 120 Query: 142 WLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W ++ Q + L C+ C CC +C + + ++G A + +A Sbjct: 121 WAHHKKEVDITRPEERIDPDEAQNVFELDRCIECGCCIAACGTKLMRPN-FIGAAGMNRA 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R+++DS DE + + + D ++ C +++ C +CPK L +A ++ + Sbjct: 180 VRFMLDSHDERSDDDFYELVGDDDGVFGCMSLIGCHDTCPKELPLQGTLADLRNRM 235 >gi|238018373|ref|ZP_04598799.1| hypothetical protein VEIDISOL_00198 [Veillonella dispar ATCC 17748] gi|237864844|gb|EEP66134.1| hypothetical protein VEIDISOL_00198 [Veillonella dispar ATCC 17748] Length = 320 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYEA-DRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + +++ Sbjct: 58 GACSIRVNGEAMLGCEAKIDELTERYGTDELTIAPIGNFRVIRDLVVDWEAKVDRLKTVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTARQDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA+ I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAFD-NGLWKCVHCMNCISRCPKHLKPAQDISNLRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|57168549|ref|ZP_00367682.1| fumarate reductase iron-sulfur protein [Campylobacter coli RM2228] gi|305432966|ref|ZP_07402124.1| fumarate reductase subunit B [Campylobacter coli JV20] gi|57020054|gb|EAL56731.1| fumarate reductase iron-sulfur protein [Campylobacter coli RM2228] gi|304444120|gb|EFM36775.1| fumarate reductase subunit B [Campylobacter coli JV20] Length = 241 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 2 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGVPKLACKTLTKDYSDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVES 120 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ E E ++ L C+ C C SC + + ++ LL+ Sbjct: 121 WVHNEKETDISKIEERIEPEVAEETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 ARYLQDPHDHRTVEDFYELVGDDDGVFGCMSLLACEDNCPKNLPLQSKIAYMRRQLVAQR 239 >gi|257077177|ref|ZP_05571538.1| succinate dehydrogenase iron-sulfur subunit [Ferroplasma acidarmanus fer1] Length = 313 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 11/240 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E+ + ++N + G +Y + +D M + L IK++ DP+L R SC Sbjct: 2 EEKEITVNVKKYN-EKDGA-FWKSYKLSVDKYTQMT-EVLRRIKSEQDPSLAYRASCHMA 58 Query: 84 ICGSCGMNIDGTNTLACVK---DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 +CGSC M I+G +LAC D K I + + + ++DL+ D+ FY + + Sbjct: 59 VCGSCSMKINGVPSLACRTIALQATDEKNEINLESMDYYPGVRDLITDIDVFYDKMYKVM 118 Query: 141 PWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P L + E + ED+ ++ EC+ C C ++CPS +++LGPA + Sbjct: 119 PRLVADNSVLSGENEQRMTPEDQTEVWKFEECIYCGLCVSACPSVKE-DEKFLGPAAHAK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R++ D RD + ERLD L D YRC + C + CP+ + P AI K K L + K Sbjct: 178 GFRFVDDERDTKRQERLDILMD--SAYRCTSCYMCYEVCPQDVQPVIAIKKTKNYLDEYK 235 >gi|257065369|ref|YP_003145041.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Slackia heliotrinireducens DSM 20476] gi|256793022|gb|ACV23692.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Slackia heliotrinireducens DSM 20476] Length = 315 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 13/236 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + + R++ Y + +L L I+ + D +L ++CR IC Sbjct: 2 ETITFIVKRFDGQKS---WKQEYRFE--RSVMTLLGCLNKIREEQDDSLCFTQACRHSIC 56 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIA-----VYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 GSC + ++G+ LAC + D+ + PL + V++DLVV + + + Sbjct: 57 GSCAVQVNGSAYLACETQLDDLIDTFKTTRFELAPLNNFPVVRDLVVSFDEKAEKMKKVM 116 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 PW+ + E Q+ D K +CV+C CC++ C ++ YL P I+ +A+ Sbjct: 117 PWMCEHKNREGHE--QTEADYHKYMEATDCVLCGCCASECRELVYDDGTYLEPFIMNKAF 174 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R++ DSRDE ER+ + D L++C CT CPK + A+ I+ ++ L Sbjct: 175 RFIRDSRDECGDERILAVLD-NNLWKCIHCQQCTTKCPKEIPIAEEISYMRRRALR 229 >gi|159039679|ref|YP_001538932.1| fumarate reductase iron-sulfur subunit [Salinispora arenicola CNS-205] gi|157918514|gb|ABV99941.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Salinispora arenicola CNS-205] Length = 366 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 13/247 (5%) Query: 19 NAPTGEKNLK-EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + GE K ++RI+R + + G+ + Y V+++ G +VLD + +++ P L R Sbjct: 6 SQAAGEPATKRQFRIWRGD-ETGGD--LQDYLVEVN-EGEVVLDVIHRLQSTDAPDLACR 61 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQ 135 +C+ G CGSC + I+G LAC+ M + PL +++DLV D+S Y + Sbjct: 62 WNCKAGKCGSCSVEINGKPKLACMTRMSTFTEDETISVTPLRTFPIVRDLVTDVSFNYEK 121 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLG 192 R + + D ++ +C+ C C T C + N + G Sbjct: 122 ARETPAFAPPPG-VTPGDYRMQQVDVERSQEFRKCIECFLCQTVCHVIRDHEENKPAFAG 180 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIK 251 P ++A + D + +R + + L C+ CT+ CP+ + I +K Sbjct: 181 PRYFIRAAELDMHPLDT-RDDRKEYAQAEQGLGYCNITKCCTEVCPEHIKITDNGIIPMK 239 Query: 252 MMLLDRK 258 ++DRK Sbjct: 240 ERVVDRK 246 >gi|283955116|ref|ZP_06372618.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793329|gb|EFC32096.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 414] Length = 241 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 2 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGVPKLACKTLTKDYLDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E + L C+ C C SC + + ++ LL+ Sbjct: 121 WVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 ARYLQDPHDHRTVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 239 >gi|257465033|ref|ZP_05629404.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor 202] gi|257450693|gb|EEV24736.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor 202] Length = 188 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 2/186 (1%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+NP+ P ++ + V D +LD L YIK+++ P L+ R SCR ICGSC Sbjct: 5 TIEVLRYNPEQDNEPHLEKFEVPFD-GQTSLLDALNYIKDELQPELSYRWSCRMAICGSC 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++G LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 64 GMMVNGKPKLACKTFLRDYSGHMRIEPLSNFPIERDLVVDLSHFIDSLEAIQPYIIDNKA 123 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q+ +K C+ C C +CP + N ++GPA L A+R+ +D+RD Sbjct: 124 PEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFIGPAALTLAHRYNLDNRD 182 Query: 209 EFQGER 214 +G+R Sbjct: 183 NGRGQR 188 >gi|57506242|ref|ZP_00372160.1| fumarate reductase iron-sulfur protein [Campylobacter upsaliensis RM3195] gi|315638737|ref|ZP_07893910.1| fumarate reductase subunit B [Campylobacter upsaliensis JV21] gi|57015469|gb|EAL52265.1| fumarate reductase iron-sulfur protein [Campylobacter upsaliensis RM3195] gi|315481146|gb|EFU71777.1| fumarate reductase subunit B [Campylobacter upsaliensis JV21] Length = 241 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 2 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTQIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVES 120 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ E E + L C+ C C SC + + ++ LL+ Sbjct: 121 WVHNEKETDISKIEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ +K Sbjct: 180 ARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQK 239 >gi|289548936|ref|YP_003473924.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermocrinis albus DSM 14484] gi|289182553|gb|ADC89797.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermocrinis albus DSM 14484] Length = 226 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 12/225 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + RI R + + +TY+V + G L+ L IK + DPTLT R CR GICG+C Sbjct: 4 KLRIRREDREKGV--RYETYHVKYE-EGMTFLEALQRIKEEQDPTLTFRHFCRAGICGTC 60 Query: 89 GMNIDGTNTLACV---KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 + I+G LAC + + V PL + VIKDL VD+ + R I W++ Sbjct: 61 TIYINGYPKLACKEQVLPYVITQREVIVEPLKNFRVIKDLAVDIDPAIRKLRDIGAWIEE 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +P E +KI+ +C++C C + CP +RY GP + +R+L+D Sbjct: 121 RKEEP----RIEQERSRKIEEASDCILCFACQSYCP--QTLEERYAGPLFFAKIFRFLMD 174 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 RD RL + LY C + C CPK + PA I ++ Sbjct: 175 PRDRKPQLRLKQAVEEGYLYHCLSCNKCNNVCPKEVQPATLIREL 219 >gi|115377080|ref|ZP_01464296.1| succinate dehydrogenase iron-sulfur protein [Stigmatella aurantiaca DW4/3-1] gi|310821308|ref|YP_003953666.1| succinate dehydrogenase, iron-sulfur protein [Stigmatella aurantiaca DW4/3-1] gi|115365919|gb|EAU64938.1| succinate dehydrogenase iron-sulfur protein [Stigmatella aurantiaca DW4/3-1] gi|309394380|gb|ADO71839.1| Succinate dehydrogenase, iron-sulfur protein [Stigmatella aurantiaca DW4/3-1] Length = 268 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 11/246 (4%) Query: 20 APTG-EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDN------CGPMVLDGLLYIKNKIDP 72 P+ +RI+R + G D + + C + + ++ K Sbjct: 5 QPSSVSSQTITFRIWRQD-GPGGESHYDEFRIPYHKGANVVSCLMEIQRNPVTVQGKKVA 63 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CGSC MNI+G +AC + ++ I + PL VI+DL V+ Sbjct: 64 PVVWDAACLEEVCGSCAMNINGRVRMACSALIDKLEQPITLEPLKKFPVIRDLTVNRDRM 123 Query: 133 YSQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ QS +D + L C+ C C +CP + ++ Sbjct: 124 FEALKRVKAWIPVDGTHNLGPGPRQSPKDHATMYVLSTCITCGSCLEACPQV-TLDNHFV 182 Query: 192 GPAILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G A + QA + ++ + ER L P + C NC + CPK + +IA + Sbjct: 183 GAAAISQARLFNMNPTGKLNAEERTRALMGPGGVQDCGKAQNCVKVCPKEIPLTSSIAAM 242 Query: 251 KMMLLD 256 + Sbjct: 243 NREVTK 248 >gi|111018061|ref|YP_701033.1| fumarate reductase iron-sulfur subunit [Rhodococcus jostii RHA1] gi|110817591|gb|ABG92875.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus jostii RHA1] Length = 249 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + D + Y + ++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 FRVWRGDADGGA---LQDYSIPVN-EGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + V PL VI+DLV D+S Y++ R I + Sbjct: 63 AEINGQPRLLCMTRMSTFTEDEVVTVTPLRAFPVIRDLVTDVSFNYAKAREIPSFTPPPG 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLI 204 P E D ++ +C+ C C +C + D + GP ++ + Sbjct: 123 LGPG-EYRMQQIDVERSQEFRKCIECFLCQNTCHVIRDHDDNKPAFSGPRFFIRVAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R D ++ F L C+ CT+ CP+G+ AI +K ++DR+ Sbjct: 182 HPLD--TADRRDAAQEEFGLGLCNITKCCTEVCPEGIKITDNAIIPMKERVVDRR 234 >gi|57237465|ref|YP_178478.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni RM1221] gi|86149212|ref|ZP_01067444.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151243|ref|ZP_01069458.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153605|ref|ZP_01071808.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597275|ref|ZP_01100510.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613625|ref|YP_001000121.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|153952257|ref|YP_001398548.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. doylei 269.97] gi|157414705|ref|YP_001481961.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167005079|ref|ZP_02270837.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205355940|ref|ZP_03222708.1| fumarate reductase iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562068|ref|YP_002343847.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283955833|ref|ZP_06373324.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 1336] gi|315123967|ref|YP_004065971.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166269|gb|AAW35048.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni RM1221] gi|85840570|gb|EAQ57827.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841590|gb|EAQ58837.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842566|gb|EAQ59778.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250420|gb|EAQ73378.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190336|gb|EAQ94310.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359774|emb|CAL34560.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|152939703|gb|ABS44444.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. doylei 269.97] gi|157385669|gb|ABV51984.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni 81116] gi|205346064|gb|EDZ32699.1| fumarate reductase iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283792788|gb|EFC31566.1| fumarate reductase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 1336] gi|284925681|gb|ADC28033.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni IA3902] gi|315017689|gb|ADT65782.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057833|gb|ADT72162.1| Succinate dehydrogenase iron-sulfur protein [Campylobacter jejuni subsp. jejuni S3] gi|315929234|gb|EFV08452.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 305] Length = 241 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 2 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E + L C+ C C SC + + ++ LL+ Sbjct: 121 WVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 ARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 239 >gi|268679037|ref|YP_003303468.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurospirillum deleyianum DSM 6946] gi|268617068|gb|ACZ11433.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurospirillum deleyianum DSM 6946] Length = 240 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 8/237 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 R ++NP +K Y ++ + G + L I+ +D L+ CR G Sbjct: 2 SRTITIRAMKYNPQSKLSKAHFAEYKLE-ETDGMTLFIALTKIRETMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFY-SQHRSIEP 141 ICGSCGM ++GT LAC KD K I + P+P +IKDL VD ++ + +E Sbjct: 61 ICGSCGMMVNGTPKLACRTLTKDFKDGIIQLMPMPAFKLIKDLSVDTGNWMNDMSKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T + + + L C+ C C +C + + ++G L + Sbjct: 121 WIHTNHQPDISKLEAPMDPKLADETFELDRCIECGICVAACGTKLMRPN-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+ +D DE E + + D ++ C +++ C +CPK L IA ++ L+ Sbjct: 180 ARFAMDPHDERTDEDFYELVGDDDGVFGCMSLVACEDNCPKHLPLQTKIAYMRRKLV 236 >gi|85706044|ref|ZP_01037140.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Roseovarius sp. 217] gi|85669632|gb|EAQ24497.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Roseovarius sp. 217] Length = 238 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 6/225 (2%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL 98 G M + V VLD + +I+ + DPTL+ R +CR G+CGSC M ++G Sbjct: 10 EAGKTRMQRFDVPA-RENQTVLDVVSWIQQEADPTLSYRFACRVGMCGSCAMMVNGVPRW 68 Query: 99 ACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 C + + + + PL ++ VIKDL DM F+ + + E + + Sbjct: 69 TCRTHVSRVANDGRLDIAPLRNLPVIKDLATDMDPFFDKWVAAEARHHPTRGRLEEFDPI 128 Query: 157 SHE--DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + +R + + EC+ C C +C + N D YLGPA L +A+ L DSRD + Sbjct: 129 TPDNPERAEANLGIECINCGICYAACDTVAGNPD-YLGPAALQRAWTLLNDSRDADRPTI 187 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L + + CH++ +C Q CP LNP +AIA +K + + Sbjct: 188 LAAVSGKGGCHNCHSMGSCAQYCPNELNPMRAIAGLKRETVKAAL 232 >gi|218291127|ref|ZP_03495142.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicyclobacillus acidocaldarius LAA1] gi|218238938|gb|EED06146.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicyclobacillus acidocaldarius LAA1] Length = 262 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 12/247 (4%) Query: 22 TGEKNLKEYRIYRW-NPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTL 74 I R NP+ P + + V + C + + K + + Sbjct: 13 AKSDRKVHLIIERQDNPE--SEPYWEEFEVPYRPGMNVIACLMEIQRNPVNKKGEPVAPV 70 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 T +C E +CG+C M I+ AC + ++ I + P+ V++DLVVD S + Sbjct: 71 TWEMNCLEEVCGACTMVINNKPRQACSALVDKLQQPIRIRPMRTFPVVRDLVVDRSRMFE 130 Query: 135 QHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + I+ W+ S E++Q L C C C +CP+ + ++GP Sbjct: 131 ALKRIKAWIPIDGTHDLGPGPRMSSEEQQIAYELSRCFTCGACVEACPNVN-DKTSFIGP 189 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + QA + + + + ERL L ++ C NC + CPKG+ +IA + Sbjct: 190 FAISQARLFNMHPTGKMNKEERLQALMGEGGIFECGNAQNCVEVCPKGIPLTTSIAVMNR 249 Query: 253 MLLDRKI 259 + R I Sbjct: 250 EVTYRAI 256 >gi|148828020|ref|YP_001292773.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittGG] gi|148719262|gb|ABR00390.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae PittGG] Length = 251 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ Q K C+ C C +CP + N +LGPA Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPA 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + A+R+ +D+RD + +R+ L Sbjct: 184 AITMAHRYNLDNRDHGKAKRMSLLNGKTGFG 214 >gi|148926501|ref|ZP_01810184.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145844664|gb|EDK21770.1| fumarate reductase iron-sulfur protein [Campylobacter jejuni subsp. jejuni CG8486] gi|307747345|gb|ADN90615.1| Fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni M1] Length = 243 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 4 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAG 62 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 63 ICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVES 122 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E + L C+ C C SC + + ++ LL+ Sbjct: 123 WVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 181 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 182 ARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 241 >gi|315503738|ref|YP_004082625.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. L5] gi|315410357|gb|ADU08474.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. L5] Length = 368 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 12/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + +++RI+R + + G+ + Y V+++ G +VLD + ++ P L R +C+ G Sbjct: 2 GSKRQFRIWRGD-ETGGD--LKDYTVEVN-EGEVVLDVIHRLQATEAPDLACRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC M I+G L C+ M + + V PL VI+DLV D+S Y + R + Sbjct: 58 CGSCSMEINGKPRLGCMTRMSTFEESETVTVTPLRTFPVIRDLVTDVSFNYEKARETPAF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQA 199 P + D ++ +C+ C C C + + + GP ++A Sbjct: 118 APPADVAPG-DYRMQQVDVERSQEFRKCIECFLCQNVCHVIRDHDENKPAFSGPRFFIRA 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIKMMLLDRK 258 + D R + + L C+ CT+ CP+ + I +K ++DR+ Sbjct: 177 AELDMHPLDARTDRR-EYAQSDMGLGFCNITKCCTEVCPEHIKITDNGIIPMKERVVDRR 235 >gi|297192296|ref|ZP_06909694.1| fumarate reductase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] gi|197719720|gb|EDY63628.1| fumarate reductase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 256 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R +P G ++ + V++++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 8 FKVWRGDPSGGG---LEDFTVEVND-GEVVLDIIHRLQATQVSDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL V++DLV D+S Y + R I ++ Sbjct: 64 AEINGRPRLMCMTRMSVFSKEETITVTPLRAFPVVRDLVTDVSFNYEKAREIPAFVPP-P 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 A E D ++ +C+ C C +C + N + + GP L++ + Sbjct: 123 ELAAGEYRMQQMDVERSQEFRKCIECFLCQDTCHVVRDHEENKEAFAGPRFLMRIAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D G +R +D L C+ CT+ CP+G+ A+ +K DRK Sbjct: 183 HPLDAAAGTGLDRRTTAQDEHGLGYCNITKCCTEVCPEGIKITDNALIPMKERAADRK 240 >gi|15606011|ref|NP_213388.1| fumarate reductase iron-sulfur subunit [Aquifex aeolicus VF5] gi|2983184|gb|AAC06784.1| fumarate reductase iron-sulfur subunit [Aquifex aeolicus VF5] Length = 230 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 14/234 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +++R+NP+ D + V + G L IK +IDP+ + R CR GICG+C Sbjct: 7 KLKVFRYNPETGERKY-DYFEVPYE-EGMTFLRAFQKIKEEIDPSFSFRAFCRAGICGTC 64 Query: 89 GMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 + IDG LAC + + + V PL VI+DLVVD ++ + W+K Sbjct: 65 TVFIDGFPKLACKEQTLPYVLSEQIVTVEPLDKFEVIRDLVVDNEEVINRMKKFRTWIK- 123 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + E+ E +KI+ +C++C+ C + CP + Y GP + YR+L D Sbjct: 124 ---EYQGEVRIPPEVNKKIEKGADCILCSACQSYCP--QVLEEEYAGPLFFAKIYRFLED 178 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+E + R+ LY C + C +CPK + PA I ++ ML+ +I Sbjct: 179 PREEDKEFRIKEAL-EGHLYHCLSCNKCNNACPKEVEPATLIREL--MLVKSEI 229 >gi|226360189|ref|YP_002777967.1| fumarate reductase iron-sulfur subunit [Rhodococcus opacus B4] gi|226238674|dbj|BAH49022.1| putative succinate dehydrogenase iron-sulfur protein [Rhodococcus opacus B4] Length = 250 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R + D ++ Y + ++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 QFRVWRGDADGGA---LEDYTIPVN-EGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 62 SAEINGQPRLMCMTRMSTFTEDEVVTVTPLRAFPVIRDLVTDVSFNYEKAREIPSFTPPP 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWL 203 P E D ++ +C+ C C +C + D + GP ++ Sbjct: 122 GLGPG-EYRMQQIDVERSQEFRKCIECFLCQNTCHVIRDHDDNKPAFSGPRFFIRVAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R D ++ F L C+ CT+ CP+G+ AI +K ++DR+ Sbjct: 181 MHPLD--TADRRDAAQEEFGLGLCNITKCCTEVCPEGIKITDNAIIPMKERVVDRR 234 >gi|90704624|emb|CAF31350.1| fumarate reductase Fe-S subunit [Campylobacter jejuni] Length = 241 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + +++NP +K P TY ++ + V L I+ K+D L+ CR G Sbjct: 2 SRKLTIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEP 141 ICGSC M I+G LAC KD I + P+P IKDL V+ ++ + +E Sbjct: 61 ICGSCAMMINGVPKLACKTLTKDYLDGVIELMPMPAFRHIKDLSVNTGEWFEDTCKRVES 120 Query: 142 WLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ + E + L C+ C C SC + + ++ LL+ Sbjct: 121 WVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRT 179 Query: 200 YRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+L D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 ARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 239 >gi|313894396|ref|ZP_07827961.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441220|gb|EFR59647.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Veillonella sp. oral taxon 158 str. F0412] Length = 320 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 12/241 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 Y I+R+ +G + T+ D + +L GL IK+ DPTLT +CR +C Sbjct: 2 RQITYHIHRY---QQGRAFVQTFKFDYEA-DRTILWGLQKIKDTQDPTLTFLAACRSAVC 57 Query: 86 GSCGMNIDGTNTLACVKD-----MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+C + ++G L C + + + P+ + VI+DLVVD + + + Sbjct: 58 GACSVRVNGEAMLGCEAKIDELTERYGTDELTIAPIGNFRVIRDLVVDWEAKVDRLKLVA 117 Query: 141 PWL--KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 PW+ K + K + Q+ D +K EC++C CC++ C D +L P + + Sbjct: 118 PWIFLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTARQDDFLEPYVFTK 177 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+++DSRD+ + D L++C MNC CPK L PA I+ ++ Sbjct: 178 ANRFVLDSRDDAPMAHIQPAFD-NGLWKCVHCMNCISRCPKHLKPAVDISNLRKEATKAG 236 Query: 259 I 259 + Sbjct: 237 L 237 >gi|297157549|gb|ADI07261.1| fumarate reductase iron-sulfur subunit [Streptomyces bingchenggensis BCW-1] Length = 256 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + + G + ++V+++ G +VLD + I+ P L +R +C+ G CGSC Sbjct: 8 FKVWRGDVEGGG---LKDFHVEVN-EGEVVLDIVHRIQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + + PL V++DLV D+S Y + R + ++ Sbjct: 64 AEINGRPRLMCMTRMSVFGRDETLTITPLRAFPVVRDLVTDVSFNYEKAREVPSFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLI 204 P E ED ++ +C+ C C +C D + GP L++ + Sbjct: 124 LGPG-EYRMWQEDVERSQEFRKCIECFLCQDTCHVVRDFEDNKEVFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDGAAETGLDRKRTAQEEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|302869780|ref|YP_003838417.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora aurantiaca ATCC 27029] gi|302572639|gb|ADL48841.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora aurantiaca ATCC 27029] Length = 368 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 12/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + +++RI+R + + G+ + Y V+++ G +VLD + ++ P L R +C+ G Sbjct: 2 GSKRQFRIWRGD-ETGGD--LKDYTVEVN-EGEVVLDVIHRLQATEAPDLACRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC M I+G L C+ M + + V PL VI+DLV D+S Y + R + Sbjct: 58 CGSCSMEINGKPRLGCMTRMSTFEESETVTVTPLRTFPVIRDLVTDVSFNYEKARETPAF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 P + D ++ +C+ C C C + N + GP ++A Sbjct: 118 APPADVAPG-DYRMQQVDVERSQEFRKCIECFLCQNVCHVIRDHEENKPAFSGPRFFIRA 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIKMMLLDRK 258 + D R + + L C+ CT+ CP+ + I +K ++DR+ Sbjct: 177 AELDMHPLDARTDRR-EYAQSDMGLGFCNITKCCTEVCPEHIKITDNGIIPMKERVVDRR 235 >gi|302553912|ref|ZP_07306254.1| fumarate reductase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] gi|302471530|gb|EFL34623.1| fumarate reductase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] Length = 258 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + G ++ + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGDVSGGG---LEDFEVEVND-GEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL V++DLV D+ Y++ R + ++ Sbjct: 64 AEINGRPRLMCMTRMSVFDREETITVTPLRAFPVVRDLVTDVGFNYTKAREVPSFVPPAG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E ED + +C+ C C +C + N + GP L++ + Sbjct: 124 -LAPGEYRMMQEDVDRSQEFRKCIECFLCQDTCHVVRDHEENKQAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAAESGLDRKSTAQDEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|126652654|ref|ZP_01724815.1| succinate dehydrogenase iron-sulfur subunit [Bacillus sp. B14905] gi|126590503|gb|EAZ84621.1| succinate dehydrogenase iron-sulfur subunit [Bacillus sp. B14905] Length = 259 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 12/241 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTL 74 + + I R + GN + V G V+ L+ I+ + + Sbjct: 5 ANTGRMVKVEILRQDTQ-GGNSYWQKFQVPY-RHGMNVISILMEIQKNPVTENGENTSPV 62 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 + +C E +CG+C M I+G +C + + I + P+ VI+DL VD ++ Sbjct: 63 SWDMNCLEEVCGACSMVINGRPRQSCSTLVDQLTEPIKLEPMKTFPVIRDLQVDRERMFN 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ E + E RQ L +C+ C C +CP+ + ++GP Sbjct: 123 ALKKVKAWVPIDGTYDLGEGPRMPEGKRQWAYELSKCMTCGVCMEACPNVSEKAS-FIGP 181 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A L Q + + ERL+ + L C NC +CPKG+ +IA + Sbjct: 182 APLSQVRLFNTHPTGAMIKDERLNAIMGDGGLANCGNSQNCVAACPKGIPLTTSIASLNR 241 Query: 253 M 253 Sbjct: 242 A 242 >gi|290957636|ref|YP_003488818.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces scabiei 87.22] gi|260647162|emb|CBG70261.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces scabiei 87.22] Length = 258 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + G ++ + VD+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGD---VGGGGLEDFEVDVND-GEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL VI+DLV D+ Y++ R + ++ Sbjct: 64 AEINGRPRLLCMTRMSVFTREETITVTPLRAFPVIRDLVTDVGFNYTKAREVPAFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED + +C+ C C +C + N + GP L++ + Sbjct: 124 VGPG-EYRMMQEDVDRPQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D + +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAEDTGLDRKRTAQDEHGLGYCNITKCCTEVCPEGIRITDNALIPLKERAVDRK 240 >gi|296271007|ref|YP_003653639.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermobispora bispora DSM 43833] gi|296093794|gb|ADG89746.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermobispora bispora DSM 43833] Length = 251 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 13/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + ++R++R G ++ Y V+++ G +VLD + ++ P L +R +C+ G Sbjct: 2 GHKAKFRVWRG---EGGEGQLEDYTVEVN-EGEVVLDVIHRLQATQAPDLAVRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC M I+G LAC+ M I V PL VIKDLV D+S Y + I + Sbjct: 58 CGSCSMEINGRPRLACMTRMSTFDPNETITVTPLRTFPVIKDLVTDVSFNYEKALQIPSF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 + KP E D ++ +C+ C C C + N + GP L++ Sbjct: 118 TPPSNVKPG-EFRMQQVDVERSQEFRKCIECFLCQNVCHVIRDHEENKPAFAGPRFLMRI 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R + ++ F L C+ CT+ CP+G+ A+ +K ++DRK Sbjct: 177 AELDMHPYD--TLDRKNAAQEEFGLGYCNITKCCTEVCPEGIKITDNALIPLKERVVDRK 234 >gi|297202144|ref|ZP_06919541.1| fumarate reductase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] gi|197713580|gb|EDY57614.1| fumarate reductase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] Length = 256 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 14/244 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 ++++R + G ++ + V++++ G +VLD + ++ P L +R +C+ G Sbjct: 2 SGYTAHFKVWRGDVKGGG---LEDFKVEVND-GEVVLDIIHRLQATQAPDLAVRWNCKAG 57 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 CGSC I+G L C+ M I V PL V++DLV ++ Y + R + Sbjct: 58 KCGSCSAEINGRPRLMCMTRMSVFTPEETITVTPLRAFPVVRDLVTNVGFNYQKAREVPA 117 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQ 198 ++ P E ED + +C+ C C +C + N + GP L++ Sbjct: 118 FVPPPDLGPG-EYRMMQEDVDRSQEFRKCIECFLCQDTCHVVRDHEENKTAFAGPRFLMR 176 Query: 199 AYRWLIDSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMML 254 + D + +R +D L C+ CT+ CP+G+ A+ +K Sbjct: 177 VAELDMHPLDAAEESGLDRKKTAQDEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERA 236 Query: 255 LDRK 258 +DRK Sbjct: 237 VDRK 240 >gi|169829492|ref|YP_001699650.1| succinate dehydrogenase iron-sulfur subunit [Lysinibacillus sphaericus C3-41] gi|168993980|gb|ACA41520.1| Succinate dehydrogenase iron-sulfur protein [Lysinibacillus sphaericus C3-41] Length = 259 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 12/241 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTL 74 + + I R + GN + V G V+ L+ I+ + + Sbjct: 5 ANTGRMVKVEILRQDTQ-GGNSYWQKFQVPY-RHGMNVISILMEIQKNPVTENGENTSPV 62 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 + +C E +CG+C M I+G +C + + I + P+ VI+DL VD ++ Sbjct: 63 SWDMNCLEEVCGACSMVINGRPRQSCSTLVDQLTEPIKLEPMKTFPVIRDLQVDRERMFN 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ E + E RQ L +C+ C C +CP+ + ++GP Sbjct: 123 ALKKVKAWVPIDGTYDLGEGPRMPEGKRQWAYELSKCMTCGVCMEACPNVSEKAS-FIGP 181 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A L Q + + ERL+ + L C NC +CPKG+ +IA + Sbjct: 182 APLSQVRLFNTHPTGAMIKDERLNAIMGDGGLANCGNSQNCVAACPKGIPLTTSIASLNR 241 Query: 253 M 253 Sbjct: 242 A 242 >gi|238060962|ref|ZP_04605671.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. ATCC 39149] gi|237882773|gb|EEP71601.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. ATCC 39149] Length = 354 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 12/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + +RI+R + ++ G+ + Y V+++ G +VLD + ++ P L R +C+ G Sbjct: 2 GTKRHFRIWRGD-ESGGD--LQDYQVEVN-EGEVVLDVIHRLQATDAPDLACRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC M I+G L C+ M + + V PL VI+DLV D+S Y + R + Sbjct: 58 CGSCSMEINGMPKLGCMTRMSTFEEAETVTVTPLRTFPVIRDLVTDVSFNYEKARETPAF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 P E D ++ +C+ C C C + N + GP ++A Sbjct: 118 APPAGVAPG-EYRMQQVDVERSQEFRKCIECFLCQNVCHVVRDHEENKQAFSGPRYFIRA 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R + + L C+ CT+ CP+ + AI +K ++DR+ Sbjct: 177 AELDMHPLDAKT-DRKEYAQAEQGLGFCNITKCCTEVCPEHIKITDNAIIPMKERVVDRR 235 >gi|269957002|ref|YP_003326791.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] gi|269305683|gb|ACZ31233.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Xylanimonas cellulosilytica DSM 15894] Length = 247 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 R++R + D + Y V+ + G +VLD + ++ P L +R +C+ G CGSC Sbjct: 4 TLRVWRGDADGGA---LTDYEVEA-HEGEVVLDVVHRLQATQTPDLAVRWNCKAGKCGSC 59 Query: 89 GMNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + + + PL VI+DLV D+S+ Y++ R I + Sbjct: 60 SAEINGRPRLMCMTRMSVFEPGEPVTITPLRTFPVIRDLVTDVSYNYAKAREIPSFTPPP 119 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWL 203 E + D ++ +C+ C C C + + Y GP L++ Sbjct: 120 G-LAPGEYRMAQADVERSQEFRKCIECFLCQDVCHVIRDHEENKAGYAGPRFLMRVAELE 178 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R+D ++D L C+ CT+ CP+G+ A+ +K + DRK Sbjct: 179 MHPLDVA--DRVDAVQDEHGLGHCNITKCCTEVCPEGIKITDNALIPMKERVADRK 232 >gi|299535533|ref|ZP_07048854.1| succinate dehydrogenase iron-sulfur subunit [Lysinibacillus fusiformis ZC1] gi|298728733|gb|EFI69287.1| succinate dehydrogenase iron-sulfur subunit [Lysinibacillus fusiformis ZC1] Length = 259 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 12/241 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI-------DPTL 74 + + I R + GN + V G V+ L+ I+ + Sbjct: 5 ANTGRMVKVEILRQDTQ-GGNSYWQKFQVPY-RHGMNVISILMEIQKNPVTEDGVNTSPV 62 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 + +C E +CG+C M I+G +C + + I + P+ VI+DL VD ++ Sbjct: 63 SWDMNCLEEVCGACSMVINGRPRQSCSTLVDQLTEPIKLEPMKTFPVIRDLQVDRERMFN 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ E + E RQ L +C+ C C +CP+ + ++GP Sbjct: 123 ALKKVKAWVPIDGTYDLGEGPRMPEGKRQWAYELSKCMTCGVCMEACPNVSEKAS-FIGP 181 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A L Q + + ERL+ + L C NC +CPKG+ +IA + Sbjct: 182 APLSQVRLFNTHPTGAMIKDERLNAIMGDGGLANCGNSQNCVAACPKGIPLTTSIASLNR 241 Query: 253 M 253 Sbjct: 242 A 242 >gi|256810355|ref|YP_003127724.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus fervens AG86] gi|256793555|gb|ACV24224.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus fervens AG86] Length = 489 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 16/233 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + + R++ ++Y V VL+ L YI + R SCR G CG Sbjct: 1 MVKITVKRFD---GKKEYFESYEVP---ENITVLEALEYINKNYGANILFRASCRNGQCG 54 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+G LAC +++ + + PL VI+DL+VD +Y + I+ ++ Sbjct: 55 SCAVTINGEPRLACETKVENN---MVIEPLRGFKVIRDLIVDREEYYKKLLGIKNYIIRK 111 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E++ + ++ L C+ C C ++CP+ + Y GP + Q R+ D Sbjct: 112 KYPEELEIIL-PKYVEENKELRGCIDCLSCLSTCPAREVSD--YPGPTFMRQLARFAFDK 168 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 RDE E E+ LY C T C + CP+ ++ KAI K++ + R Sbjct: 169 RDEDNREVTAYFEN---LYNCTTCAKCVEVCPREIDIVHKAIEKLRALAFSRG 218 >gi|315926677|gb|EFV06056.1| fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932655|gb|EFV11585.1| Fumarate reductase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 327] Length = 237 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 8/236 (3%) Query: 29 EYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +++NP +K P TY ++ + V L I+ K+D L+ CR GICGS Sbjct: 2 TIKAFKYNPLSKISKPHFVTYELE-ETPFMTVFVCLTLIREKMDADLSFDFVCRAGICGS 60 Query: 88 CGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPWLKT 145 C M I+G LAC KD I + P+P IKDL V+ ++ + +E W+ Sbjct: 61 CAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVESWVHN 120 Query: 146 VSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E + L C+ C C SC + + ++ LL+ R+L Sbjct: 121 EKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRTARYL 179 Query: 204 IDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D D + + + D ++ C +++ C +CPK L IA ++ L+ ++ Sbjct: 180 QDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQLVAQR 235 >gi|269986538|gb|EEZ92822.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 248 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 6/232 (2%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 + +YR++P+ + V + G +VLD + YI+N +DPTL +R +C+ C Sbjct: 3 KEVKMNVYRFDPNKDKEGKFQEFTVPVK-EGMVVLDAVHYIENNMDPTLGVRWNCKAARC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 GSC I+G +L C + + I V P+ ++KDLV D+S + R I + Sbjct: 62 GSCAAEINGKPSLMCKTRVDSLGDKIHVAPMKAFPIVKDLVTDVSRNWEIARKIPEFTPK 121 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K ++ + D + C+ C C C + Y+GP +++A Sbjct: 122 KGLKEPWQIAEI--DVSRSREFRNCIECFLCQDVCHVIREHDKDYIGPRFMVKAASLDTH 179 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLD 256 D R L + C+ C CP+ + AI K ++D Sbjct: 180 PLDSIN--RSKFLHEEGGAGYCNITKCCQSVCPEHIAITDNAIIPEKESIVD 229 >gi|145596281|ref|YP_001160578.1| fumarate reductase iron-sulfur subunit [Salinispora tropica CNB-440] gi|145305618|gb|ABP56200.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Salinispora tropica CNB-440] Length = 366 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 12/237 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 +++RI+R + + G+ + Y V++ G +VLD + +++ P L R +C+ G CGS Sbjct: 16 RQFRIWRGD-ETGGD--LKEYLVEVK-EGEVVLDIIHRLQSTEAPDLACRWNCKAGKCGS 71 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 C + I+G LAC+ M + PL +++DLV D+S Y + R + Sbjct: 72 CSVEINGKPKLACMTRMSTFTEDETISVTPLRTFPIVRDLVTDVSFNYEKARETPAFAPP 131 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRW 202 P + D ++ +C+ C C T C + N + GP ++A Sbjct: 132 PGVAPG-DYRMQQVDVERSQEFRKCIECFLCQTVCHVIRDHEENKPAFAGPRYFIRAAEL 190 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIKMMLLDRK 258 + D + +R + + L C+ CT+ CP+ + I +K ++DRK Sbjct: 191 DMHPLD-ARDDRKEYAQAEQGLGYCNITKCCTEVCPEHIKITDNGIIPMKERVVDRK 246 >gi|217969914|ref|YP_002355148.1| fumarate reductase iron-sulfur subunit [Thauera sp. MZ1T] gi|217507241|gb|ACK54252.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thauera sp. MZ1T] Length = 245 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 7/240 (2%) Query: 25 KNLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + I+R NP D + P + Y +D + G + L I++ P L CR G Sbjct: 2 SRRLKISIFRHNPRDPRSVPRLVDYELD-ERPGMTLFIALNAIRDTQAPDLNFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPW 142 +CG+C M IDG LAC + A ++YPLP ++ DL VD + + ++ W Sbjct: 61 VCGACAMVIDGRPGLACRTLTSTLPAAFSLYPLPVFRLVADLSVDTGSWMRELAERLQTW 120 Query: 143 LKTVSPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + L E + + L C+ C CC +C + + ++G L++ Sbjct: 121 VHLDAEPDLDRLEARMEPALAEAVYELDRCIECGCCIAACATAQMR-EGFVGAVGLVKIA 179 Query: 201 RWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R+ +D D + + + + ++ C +++ C CPK L +A ++ + + + Sbjct: 180 RFRLDPADTRDAADFYELVGNDEGIFGCMSLLACNDLCPKELPLQTQLAWLRRKMAGQGV 239 >gi|15668263|ref|NP_247056.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanocaldococcus jannaschii DSM 2661] gi|2494622|sp|Q57557|Y092_METJA RecName: Full=Uncharacterized iron-sulfur protein MJ0092 gi|1498856|gb|AAB98073.1| heterodisulfide reductase, subunit D (hdrD) [Methanocaldococcus jannaschii DSM 2661] Length = 489 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 16/233 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + + R+N +++Y V VL+ L YI + + R SCR CG Sbjct: 1 MIKITVKRFN---GEKEYLESYEVP---ENITVLEALEYINKHYEANILFRASCRNAQCG 54 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+G LAC ++ + + PL VI+DL+VD +Y + I+ +L Sbjct: 55 SCAVTINGEPRLACETKVE---DGMIIEPLRGFKVIRDLIVDREPYYKKLLGIKNYLIRK 111 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E+L + ++ L C+ C C + CP+ + Y GP + Q R+ D Sbjct: 112 NYPEELEILI-PKYVEENKELRGCIDCLSCLSVCPAREVSD--YPGPTFMRQLARFAFDK 168 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 RDE E E+ +Y C T C + CPK ++ +AI K++ + + Sbjct: 169 RDEDGREITAYFEN---IYNCTTCAKCVEVCPKEIDIVHRAIEKLRALAFSKG 218 >gi|261403360|ref|YP_003247584.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus vulcanius M7] gi|261370353|gb|ACX73102.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus vulcanius M7] Length = 490 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 16/233 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + I R++ ++Y V VL+ L YI K + R SCR G CG Sbjct: 1 MVKITIKRFD---GIKSYFESYNVP---ENITVLEALDYINKKFGANILFRYSCRNGQCG 54 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+G LAC ++ + + PL +V+KDLVVD +Y + SI+ L Sbjct: 55 SCALTINGEPKLACETKVE---EGMIIEPLKGFNVVKDLVVDREQYYKKLTSIKNHLIKE 111 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +K L C+ C C + CPS Y G + Q R+ D Sbjct: 112 KFPED-LERIPQDVVEKNKDLRGCIDCLSCLSLCPSRDV--SEYPGATFMRQLARFAFDI 168 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 RDE ER+ E+ +Y C T C + CPK ++ +AI +++ + + Sbjct: 169 RDEEDRERIAFFEN---IYNCTTCAKCVEVCPKEIDIVHRAIEQLRHLAFSKG 218 >gi|289191904|ref|YP_003457845.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus sp. FS406-22] gi|288938354|gb|ADC69109.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus sp. FS406-22] Length = 489 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 16/233 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + ++ R++ ++Y V VL L YI + R SCR G CG Sbjct: 1 MIKIKVKRFD---GKKEYFESYEVP---ENITVLGALEYINKNYGANILFRASCRNGQCG 54 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+G LAC ++ + + PL VI+DL+VD +Y + I +L Sbjct: 55 SCALTINGEPRLACETKVE---DGMIIEPLKGFKVIRDLIVDRESYYKKLLGIRNYLIRK 111 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E++ + ++ L C+ C C + CP+ + Y GP + Q R+ D Sbjct: 112 NYPEGLEIIP-QKYVEENKELRGCIDCLSCLSVCPAREVSD--YPGPTFMRQLARFAFDK 168 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 RDE E E+ +Y C T C + CPK ++ KAI +++ + + Sbjct: 169 RDEDSREITAYFEN---IYNCTTCAKCVEVCPKEIDIVHKAIERLRALAFSKG 218 >gi|108757195|ref|YP_631733.1| succinate dehydrogenase iron-sulfur subunit [Myxococcus xanthus DK 1622] gi|108461075|gb|ABF86260.1| succinate dehydrogenase, iron-sulfur protein [Myxococcus xanthus DK 1622] Length = 269 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 10/241 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLR 77 +RI+R + D D + V + +C + + ++ K + Sbjct: 10 TTKTITFRIWRQD-DPAKPGHFDEFKVPYAKGANVISCLMEIQRNPVTVEGKRVAPVIWD 68 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CGSC MNI+G +AC + ++ I + P+ V++DL V+ + + Sbjct: 69 AACLEEVCGSCAMNINGRVRMACSALIDKLEQPITLEPMSKFPVVRDLTVNRDRMFDALK 128 Query: 138 SIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I+ W+ Q+ D+ + L C+ C C +CP +D ++G A + Sbjct: 129 RIKGWVPIDGTHNLGPGPRQAPVDQSVMYVLSTCITCGSCLEACPQVTQEND-FVGAAAI 187 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 QA + ++ + ER+ +L P + C NC + CPK + +IA + + Sbjct: 188 SQARLFNMNPTGKMNSEERVRSLMGPGGIQDCGKAQNCVKVCPKEIPLVTSIAVMNREVT 247 Query: 256 D 256 Sbjct: 248 K 248 >gi|288553645|ref|YP_003425580.1| succinate dehydrogenase iron-sulfur subunit [Bacillus pseudofirmus OF4] gi|288544805|gb|ADC48688.1| succinate dehydrogenase iron-sulfur subunit [Bacillus pseudofirmus OF4] Length = 250 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLR 77 + ++++ R + D + ++ + V + K + + Sbjct: 2 SEKTIKFQVTRQD-DPNSSSYVEEFEVPYRPNMNVISALMEFRRNPVTTKGETTTPIAWD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ V++DL+VD S + + Sbjct: 61 MNCLEEVCGACSMVINGKPRQSCTALVDQLEQPIRLEPMKTFPVVRDLMVDRSRMFDSLK 120 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C +CP+ + ++GPA L Sbjct: 121 KVKAWIPIDGTYDLGPGPRMAETKRQWAYELSKCMTCGVCLEACPNVN-SKSEFIGPAPL 179 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + E + ERL+ + L C NC Q+CPKG+ +IA + Sbjct: 180 SQVRLFNAHPTGEMNKAERLETIMGDGGLANCGNSQNCVQACPKGIPLTTSIADLNRQ 237 >gi|284990323|ref|YP_003408877.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geodermatophilus obscurus DSM 43160] gi|284063568|gb|ADB74506.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geodermatophilus obscurus DSM 43160] Length = 271 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 16/264 (6%) Query: 1 MVEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 M E P S ++ +R++R + + + T+ V ++ G +VL Sbjct: 1 MTE---PGESSIRAVDEGPGGNRGGYDATFRVWRGDASSGE---LQTFTVPVN-EGEVVL 53 Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPH 118 D + ++ L +R +C+ G CGSC ++G L C+ M + V PL Sbjct: 54 DVIHRLQATQAGDLAVRWNCKAGKCGSCSAEVNGRPRLMCLTRMNTFAEDETVTVTPLRT 113 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 VI+DLV D+S+ Y + + + D + +C+ C C Sbjct: 114 FPVIRDLVTDVSYNYEKAAQVPAFTPRPRDPDG-NHRMQQVDVDRPQEFRKCIECWLCQD 172 Query: 179 SCPS---YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 +C + N + GP L++ + D +R D + F L C+ C++ Sbjct: 173 TCHVIRDHEENKAAFAGPRFLIRLAELDMHPLDVV--DRRDAAQQEFGLGYCNITKCCSE 230 Query: 236 SCPKGLNPAKA-IAKIKMMLLDRK 258 CP+G++ I +K ++DR+ Sbjct: 231 VCPEGIHLTDNGIIPLKERVVDRR 254 >gi|29829724|ref|NP_824358.1| fumarate reductase iron-sulfur subunit [Streptomyces avermitilis MA-4680] gi|29606833|dbj|BAC70893.1| putative succinate dehydrogenase iron-sulfur protein (complex II) [Streptomyces avermitilis MA-4680] Length = 258 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + G ++ + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGDVKGGG---LEDFEVEVND-GEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ M I V PL V++DLV D+ Y++ R + ++ Sbjct: 64 AEVNGRPRLMCMTRMSVFTREETITVTPLRAFPVVRDLVTDVGFNYAKAREVPAFVPPAG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED ++ +C+ C C +C + N + GP L++ + Sbjct: 124 LGPG-EYRMQQEDVERPQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAADTGLDRKRTAQDDHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|307329158|ref|ZP_07608324.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] gi|306885188|gb|EFN16208.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] Length = 256 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + D G + ++V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FRVWRGDQDGGG---LKDFHVEVND-GEVVLDIVHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ M I + PL V++DLV D+S Y++ R + ++ Sbjct: 64 AEVNGRPRLLCMTRMSVFDRAETITITPLRAFPVVRDLVTDVSFNYTKAREVPSFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED + +C+ C C +C + N + + GP L++ + Sbjct: 124 VGPG-EYRMWQEDVGRSQEFRKCIECFLCQDTCHVVRDFEENKEAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+ + A+ +K +DRK Sbjct: 183 HPLDAAADTGLDRKRTAQEEHGLGYCNITKCCTEVCPEQIKITDNALIPLKERAVDRK 240 >gi|325958421|ref|YP_004289887.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanobacterium sp. AL-21] gi|325329853|gb|ADZ08915.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanobacterium sp. AL-21] Length = 498 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 10/234 (4%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + +I R NP P + Y V+ ++ +LD L I NK D + R SCR G CG Sbjct: 1 MIKVKILRQNPRTGKEPYFEVYDVE-ESDKMKILDALNQINNKYDADIAYRYSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + ++ LAC ++K + PL V+KDLVVD S + ++ ++ +++ Sbjct: 60 SCALKMNNKIVLACKAEIK---DGAVLEPLD-FEVLKDLVVDRSKYDNKVTKMDLFVEGD 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +D + C+ C C ++CP ++ + GP + ++ +D Sbjct: 116 CSVQECPQIMFPKDYADTKKIRSCIECLSCLSACPVVK-QTEEFAGPYFMRYISKFALDP 174 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIKMMLLDRKI 259 RD +R D LY C + C + CPK +N AI K++ + + I Sbjct: 175 RD--CADRAAEGFDE-GLYTCTSCGKCKEVCPKEINTFGSAIEKLREISVQENI 225 >gi|149914203|ref|ZP_01902734.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Roseobacter sp. AzwK-3b] gi|149811722|gb|EDM71555.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Roseobacter sp. AzwK-3b] Length = 244 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 9/235 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + ++R + +T+ V VLD + +I+ + DPTLT R +CR G+CGSC Sbjct: 9 KVSVWRGTGETGE---FETFDVP-SCESQTVLDVVSWIQQQADPTLTYRFACRVGMCGSC 64 Query: 89 GMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M ++G C +K ++++ PL +M VIKDLV DM F+ + S E Sbjct: 65 AMMVNGIPRWTCRTHVKKVCENNSLSIEPLRNMPVIKDLVADMDPFFDKWVSAEALHHPT 124 Query: 147 SPKPAKELLQS--HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 S + +RQ D EC+ C C +C + N+D YLGPA L +A+ L Sbjct: 125 STRDDAITPVDATTPERQAADAGIECINCGICYAACDTVAGNAD-YLGPAALQRAWTLLN 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D++D + LD + + CH++ +CT+ CP L+P AIA +K + Sbjct: 184 DAKDGGRTAILDAVSGSGGCHNCHSMGSCTRYCPNALDPMSAIAGLKRETFRHAL 238 >gi|254460317|ref|ZP_05073733.1| succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Rhodobacterales bacterium HTCC2083] gi|206676906|gb|EDZ41393.1| succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Rhodobacteraceae bacterium HTCC2083] Length = 237 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 6/215 (2%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMK 105 D + V VLD + +++ DPTL+ R +CR G+CGSC M ++G C + Sbjct: 18 DVFEVPA-FESQTVLDVVSWVQQNADPTLSYRFACRVGMCGSCAMMVNGVPRWTCRTHIN 76 Query: 106 D--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + + PL ++ VIKDL VDM F+ + + E + + + Sbjct: 77 KVLDGNEVTIGPLRNLPVIKDLAVDMDPFFDKWVAAEGVHHGALTRDDPIAPIDEDSAPR 136 Query: 164 IDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + EC+ C+ C +C + N D YLGPA L +A+ L D++DE + LD + D Sbjct: 137 AEANAGIECINCSVCYAACDTVAGNPD-YLGPAALQRAWTLLNDAKDEGRAAILDAVSDS 195 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + CH++ +CT CP L+P AIA +K Sbjct: 196 GGCHNCHSMGSCTAYCPNDLDPMSAIAGLKRETAK 230 >gi|118469210|ref|YP_884830.1| fumarate reductase iron-sulfur subunit [Mycobacterium smegmatis str. MC2 155] gi|118170497|gb|ABK71393.1| succinate dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 249 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R + + Y V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 KLRVWRGD---DTGGELHDYTVEVND-GEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSC 62 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V PL V++DLV D+S Y + R I + Sbjct: 63 SAEINGRPRLMCMTRMSTFGEDEVVTVTPLRTFPVMRDLVTDVSFNYEKARQIPSFTPPK 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 E ED + +C+ C C C + N + + GP ++ Sbjct: 123 D-LQPGEYRMQQEDVNRSQEFRKCIECFLCQNVCHVVRDHEENKENFAGPRFHMRIAELD 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R + +D F L C+ CT+ CP+ + A+ +K + DRK Sbjct: 182 MHPLD--TVDRKEMAQDEFGLGYCNITKCCTEVCPEHIKITDNALIPMKERVADRK 235 >gi|312199588|ref|YP_004019649.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia sp. EuI1c] gi|311230924|gb|ADP83779.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia sp. EuI1c] Length = 254 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 12/233 (5%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 R++R + D G + + VD++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 8 RVWRGDADGGG---LQDFTVDVE-EGMVVLDAVHRLQASQANDLAVRWNCKAGKCGSCSA 63 Query: 91 NIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 ++G L C+ + + + + PL V++DLV D++ Y + + + Sbjct: 64 EVNGKPRLMCMTRLNTFEPGETVTITPLRTFPVVRDLVTDVTFNYEKAEEVPTFAPGKPT 123 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLID 205 + D ++ +C+ C C C + D+ + GP ++++ + Sbjct: 124 GDDGHHRMAQTDVDRVQEFRKCIECFMCQNVCHVIRDHEDKKQVFAGPRLMIRYAELEMH 183 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA-IAKIKMMLLDR 257 D +R D L + C+ CT+ CP+ + I +K ++D Sbjct: 184 PLD--TNDRRDLLRAEAGIGYCNITKCCTEVCPEHIKITDNGIIPLKERVVDA 234 >gi|302542785|ref|ZP_07295127.1| ferredoxin, 2Fe-2S [Streptomyces hygroscopicus ATCC 53653] gi|302460403|gb|EFL23496.1| ferredoxin, 2Fe-2S [Streptomyces himastatinicus ATCC 53653] Length = 256 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + D G + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FRVWRGDVDGGG---LRDFRVEVN-EGEVVLDIVHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I + PL V++DLV D+S Y++ R + ++ Sbjct: 64 AEINGQPRLLCMTRMSVFSRDETITLTPLRAFPVVRDLVTDVSFNYTKAREVPSFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED + +C+ C C +C + N + + GP L++ + Sbjct: 124 LGPG-EYRMQQEDVGRSQEFRKCIECFLCQDTCHVLRDFEQNKEAFAGPRFLMRVSELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAGEAGIDRKRAAQDEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|261885672|ref|ZP_06009711.1| fumarate reductase iron-sulfur subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 239 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 8/240 (3%) Query: 25 KNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 + R +++NP +K P Y ++ + G + L I+ K DP L+ CR G Sbjct: 2 SRKIKIRAFKYNPLSKVSKPHFAEYELE-ETDGMTLFIALNQIREKFDPGLSFDFVCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIKDLVVDMSHFYS-QHRSIEP 141 ICGSCGM ++G LAC KD I + P+P ++KDL VD ++ + + +E Sbjct: 61 ICGSCGMVVNGRPQLACRTLTKDYPSGVIELMPMPAFKLLKDLSVDTGNWMNAMSKKVES 120 Query: 142 WLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 W+ T E E Q+ L C+ C C SC + D ++G L + Sbjct: 121 WIHTNKETDISKMEKKVDPEAAQETFELDRCIECGICVASCGTALMRPD-FIGAVGLNRV 179 Query: 200 YRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R+ +D D + + + D ++ C +++ C +C K L IA ++ L K Sbjct: 180 ARFKVDPLDNRSDDDFYELVGDDNGVFGCMSLLGCEDNCHKHLPLQSKIAYMRRQLASVK 239 >gi|302558615|ref|ZP_07310957.1| ferredoxin, 2Fe-2S [Streptomyces griseoflavus Tu4000] gi|302476233|gb|EFL39326.1| ferredoxin, 2Fe-2S [Streptomyces griseoflavus Tu4000] Length = 254 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + + G ++ + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGDAEGGG---LEDFAVEVND-GEVVLDIVHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ M + I V PL VI+DLV D+ Y++ R + ++ Sbjct: 64 AEVNGRPRLLCMTRMSVFRRDETITVTPLRAFPVIRDLVTDVGFNYTKARQVPAFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E ED + +C+ C C C + N + GP L++ + Sbjct: 124 VAAG-EYRMMQEDVDRSQEFRKCIECFLCQDVCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D + +R +D L C+ CT+ CP+G+ A+ +K DRK Sbjct: 183 HPLDAAEEAGLDRKRTAQDEHGLGYCNITKCCTEVCPEGIRITDNALIPLKERAADRK 240 >gi|288818294|ref|YP_003432642.1| fumarate reductase subunit B [Hydrogenobacter thermophilus TK-6] gi|197724761|dbj|BAG70310.1| fumarate reductase, B subunit [Hydrogenobacter thermophilus] gi|288787694|dbj|BAI69441.1| fumarate reductase subunit B [Hydrogenobacter thermophilus TK-6] gi|308751891|gb|ADO45374.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobacter thermophilus TK-6] Length = 225 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 14/232 (6%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I R +P++ + + ++ G L L IK D TLT R CR GICG Sbjct: 2 ILRLSIRREDPESGICNY-QDFEIPYED-GMTFLTALQRIKEYQDETLTFRHFCRAGICG 59 Query: 87 SCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +C + I+G LAC + + + + + PL VIKDL VD + + I W+ Sbjct: 60 TCTIYINGFPKLACKEQVLPYVLLEKRVVIEPLKGFKVIKDLAVDNDKIIKKLKEIHGWV 119 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +T S + +K++ +C++C C + CP + Y GP I + YR+L Sbjct: 120 RTGSDD----CRIPSDLSRKLESAADCILCLACQSYCP--QVLEENYAGPLIFAKLYRFL 173 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D RD+ + ER + LY C + C CPK + PA I + +++ Sbjct: 174 EDPRDKDKEERFVQAVEKGNLYHCLSCNKCNHVCPKEVEPATLI---RRLMV 222 >gi|225352786|ref|ZP_03743809.1| hypothetical protein BIFPSEUDO_04418 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156393|gb|EEG69962.1| hypothetical protein BIFPSEUDO_04418 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 309 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 42/250 (16%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y +++ VLD LL IK IDPTL R SC G+CGS ++I+GT TL C Sbjct: 55 GKQWLQDYTLNV-RPEDTVLDCLLKIKRTIDPTLAFRYSCGHGMCGSDAVSINGTPTLLC 113 Query: 101 VKDMKDIKGA--------------------------------IAVYPLPHMSVIKDLVVD 128 +KD I + PLP V +DL+ D Sbjct: 114 TASVKDWAKPSNPTLVDDEGFRHTGDVSDIQENAVGAGDLGVIELAPLPGFPVQRDLIAD 173 Query: 129 MSHFYSQHRSIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + +Q R ++P+L+ A E LQ+ + K + L C+ C C SC Sbjct: 174 IDQMLNQIRKLKPYLQARGELATTADGKINAFEYLQNPQQLAKYELLSNCIACGTCEGSC 233 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ CT+ CP+G Sbjct: 234 PVY-AGGEAFIGPAALIAASRFINDSRDGQANARMDAIDSADGIAACQSVRACTRECPRG 292 Query: 241 LNPAKAIAKI 250 ++ + I ++ Sbjct: 293 IDVGEEIWQL 302 >gi|299134118|ref|ZP_07027311.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] gi|298590865|gb|EFI51067.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Afipia sp. 1NLS2] Length = 331 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 8/229 (3%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + R+ R++ ++ +++ V D VLD L YI L R C + Sbjct: 29 GDPVHVRVRRFDAEHPEQSEFESFVVPYDTS-MRVLDALNYIAENFATDLAYRWLCGTKM 87 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CG+C + ++G LAC + ++ + + PL ++ VI+DLVVD S + ++ EPWL+ Sbjct: 88 CGTCAVRMNGREVLAC---WESVEPEMTIEPLRNLPVIRDLVVDRSPYEARVAKFEPWLE 144 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 S SH+D + +C+ C C ++CP + GPA L+Q + Sbjct: 145 RPSDYAGFPEPLSHKDMKNASKALDCISCMSCFSACPVVGLGGLTNFAGPAPLVQLAQTA 204 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIK 251 +DSR++ + + ++ C + C ++CP + + I +K Sbjct: 205 LDSRNDPAK--VARALEHAGIFNCVSCYKCEEACPAKIPIVTRIIEPLK 251 >gi|319651766|ref|ZP_08005892.1| succinate dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317396585|gb|EFV77297.1| succinate dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 255 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 10/240 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLT 75 + + I R + P + + +D + + +K + + Sbjct: 3 ETKTKTVRFVISRQD-TPDSAPYQEEFEIDYRPNMNVISALMEIRRNPVNVKGEHTTPIA 61 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 62 WDMNCLEEVCGACSMIINGKPRQSCTALVDQLEQPIRLEPMRTFPVVRDLQVDRSRMFDS 121 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C +CP+ SD ++GPA Sbjct: 122 LKKVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSD-FIGPA 180 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + E + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 181 PLSQVRLFNAHPTGEMNKAERLEQIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 240 >gi|120401309|ref|YP_951138.1| fumarate reductase iron-sulfur subunit [Mycobacterium vanbaalenii PYR-1] gi|119954127|gb|ABM11132.1| succinate dehydrogenase subunit B [Mycobacterium vanbaalenii PYR-1] Length = 251 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 12/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R + + + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 KLRVWRGD---DTGGGLQDFTVEVND-GEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSC 62 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V PL V++DLV D+S Y + R I + Sbjct: 63 SAEINGRPRLLCMTRMSTFGEDEVVTVTPLRTFPVMRDLVTDVSFNYEKAREIPSFAPPK 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 + E + ED + +C+ C C C + N + GP L++ Sbjct: 123 N-LQPGEYRMAQEDVNRSQEFRKCIECFLCQNVCHVNRDHEENKLAFSGPRYLMRQAELD 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D G R + +D L C+ CT+ CP+ + A+ +K DRK Sbjct: 182 MHPLDT-HGHRAEQAQDENGLGYCNITKCCTEVCPEHIKITDNALIPMKERAADRK 236 >gi|261409212|ref|YP_003245453.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus sp. Y412MC10] gi|261285675|gb|ACX67646.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus sp. Y412MC10] Length = 254 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 14/245 (5%) Query: 19 NAPTGEKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----- 72 + ++ I R NP+ + + + G V+ L+ I+ Sbjct: 2 SQTAAASKSVKFIITRQDNPETNS--YTEEFEIPY-RPGMNVISALMEIQRNPKNAQGQT 58 Query: 73 --TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV+D S Sbjct: 59 TAPVCWDSNCLEEVCGACSMVINGKPRQACAALIDKLEQPIRIQPMKTFPVVRDLVIDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 ++ + ++ W+ + E RQ L +C+ C C +CP+ +D Sbjct: 119 RMFTALKRVKAWIPIDGTYDLGPGPKMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTD- 177 Query: 190 YLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++GPA + Q + E + ERL+ L + C NC +SCPKG+ +IA Sbjct: 178 FIGPAAISQVRLFNAHPTGEMNKEERLEALMQDGGIEGCGNSQNCVRSCPKGIPLTTSIA 237 Query: 249 KIKMM 253 ++ Sbjct: 238 EMNKD 242 >gi|89056457|ref|YP_511908.1| succinate dehydrogenase subunit B [Jannaschia sp. CCS1] gi|88866006|gb|ABD56883.1| succinate dehydrogenase subunit B [Jannaschia sp. CCS1] Length = 237 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 6/216 (2%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 MD + V + VLD + +++ DPTL+ R +CR G+CGSC M ++G C + Sbjct: 17 MDVFEVPAYDS-QTVLDVVSWVQQNADPTLSYRFACRVGMCGSCAMMVNGVPRWTCRTHI 75 Query: 105 KDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + + PL ++ VIKDL VDM F+ + + E + + + Sbjct: 76 NKVLDGNAVTIGPLRNLPVIKDLAVDMDAFFDKWVAAEGVHHGSLTRDDPIVPVDEDSAG 135 Query: 163 KIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +++ EC+ C+ C +C + N+D YLGPA L +A+ L D++DE + LD + Sbjct: 136 RVEANAGIECINCSVCYAACDTVAGNTD-YLGPAALQRAWTLLNDAKDEGRVAILDAVSG 194 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + CH++ +CT CP L+P AIA +K Sbjct: 195 SGGCHNCHSMGSCTAYCPNDLDPMSAIAGLKRETAK 230 >gi|3184554|gb|AAC18969.1| succinate dehydrogenase iron-sulfur protein subunit [Synechococcus sp. PCC 7002] Length = 332 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 18/229 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R P TY + + +LD L IK + D +L R++CR ICGSC Sbjct: 5 FNILRQR-QRNVAPEFFTYQLSVPES-TTILDCLNQIKWQQDGSLAFRKNCRNTICGSCA 62 Query: 90 MNIDGTNTLACVKDMKDIK-------------GAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 M I+G LAC ++++ I + PL + VIKDLVVDM+ F+ Q Sbjct: 63 MGINGRAALACKENVRQEITRLQGTDSDPGAIPKITITPLNNFPVIKDLVVDMTTFWQQL 122 Query: 137 RSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 ++ P+++ SP+ P E QS ++R+ ++ C++C C C + N +LGP Sbjct: 123 EAVVPYVQRRSPQVPETEFRQSPQEREALNQAGNCILCGACYAECNAVTVNP-EFLGPHA 181 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNP 243 L + R L DSRD+ RLD+ P ++ C C CP+ L P Sbjct: 182 LAKGERLLKDSRDDTTSARLDHYHQPAVGVWACTRCYQCNYVCPRKLTP 230 >gi|329926901|ref|ZP_08281304.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus sp. HGF5] gi|328938888|gb|EGG35261.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus sp. HGF5] Length = 254 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 14/245 (5%) Query: 19 NAPTGEKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----- 72 + ++ I R NP+ K + + + G V+ L+ I+ Sbjct: 2 SQTAAASKSVKFIITRQDNPETKS--YTEEFEIPY-RPGMNVISALMEIQRNPKNAQGQT 58 Query: 73 --TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV+D S Sbjct: 59 TAPVCWDSNCLEEVCGACSMVINGKPRQACAALIDKLEQPIRIQPMKTFPVVRDLVIDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 ++ + ++ W+ + E RQ L +C+ C C +CP+ +D Sbjct: 119 RMFTALKRVKAWIPIDGTYDLGPGPKMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTD- 177 Query: 190 YLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++GPA + Q + E + ERL+ L + C NC +SCPKG+ +IA Sbjct: 178 FIGPAAISQVRLFNAHPTGEMNKEERLEALMQDGGIEGCGNSQNCVRSCPKGIPLTTSIA 237 Query: 249 KIKMM 253 ++ Sbjct: 238 EMNKD 242 >gi|300784261|ref|YP_003764552.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] gi|299793775|gb|ADJ44150.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] Length = 250 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + + + V+++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 7 FRVWRGD---DTGGELQDFTVEVN-EGEVVLDIIHRLQATQASDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V P+ VI+DLV D+S Y++ R I + Sbjct: 63 AEINGKPRLLCMTRMSTFTEEEVITVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPPAD 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 KP E D ++ +C+ C C +C + N + + GP L++ + Sbjct: 123 LKPG-EYRMQQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKEAFAGPRYLMRIAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R D +D L C+ C++ CP+G++ A+ +K + DRK Sbjct: 182 HPLDVA--DRRDAAQDEHGLGYCNITKCCSEVCPEGIHITDNALIPMKERVADRK 234 >gi|118465893|ref|YP_884031.1| fumarate reductase iron-sulfur subunit [Mycobacterium avium 104] gi|254777349|ref|ZP_05218865.1| fumarate reductase iron-sulfur subunit [Mycobacterium avium subsp. avium ATCC 25291] gi|118167180|gb|ABK68077.1| succinate dehydrogenase [Mycobacterium avium 104] Length = 248 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 13/234 (5%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 R++R + N + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 RVWRGD---DANGALQDFTVEVN-EGEVVLDIIHRLQQTQTPDLAVRWNCKAGKCGSCSA 63 Query: 91 NIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 64 EINGYPRLLCMTRMSTFAEDEVVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFAPPKD- 122 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLID 205 E + ED Q+ +C+ C C C + + + GP L++ + Sbjct: 123 LQPGEYRMAQEDVQRSQEFRKCIECFLCQNVCHVIRDHDENKKAFAGPRFLMRIAELEMH 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ +D L C+ CT+ CP+ + A+ +K + DRK Sbjct: 183 PLD--TRDRRNDAQDEHGLGYCNITKCCTEVCPENIKITDNALIPMKERVADRK 234 >gi|315649362|ref|ZP_07902451.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus vortex V453] gi|315275350|gb|EFU38719.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus vortex V453] Length = 254 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 14/245 (5%) Query: 19 NAPTGEKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----- 72 + ++ I R NP+ K + + + G V+ L+ I+ Sbjct: 2 SQTAAASKSVKFIITRQDNPETKS--YTEEFELPY-RPGMNVISALMEIQRNPKNAQGQT 58 Query: 73 --TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV+D S Sbjct: 59 TAPVCWDSNCLEEVCGACSMVINGKPRQACAALIDKLEQPIRIQPMKTFPVVRDLVIDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 ++ + ++ W+ + E RQ L +C+ C C +CP+ +D Sbjct: 119 RMFTALKRVKAWIPIDGTYDLGPGPKMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTD- 177 Query: 190 YLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++GPA + Q + E + ERL+ L + C NC +SCPKG+ +IA Sbjct: 178 FIGPAAISQVRLFNAHPTGEMNKEERLEALMQDGGIEGCGNSQNCVRSCPKGIPLTTSIA 237 Query: 249 KIKMM 253 ++ Sbjct: 238 EMNKD 242 >gi|21223477|ref|NP_629256.1| fumarate reductase iron-sulfur subunit [Streptomyces coelicolor A3(2)] gi|256785417|ref|ZP_05523848.1| fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] gi|289769315|ref|ZP_06528693.1| fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] gi|14799981|emb|CAC44313.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces coelicolor A3(2)] gi|289699514|gb|EFD66943.1| fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] Length = 259 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + G ++ + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGDVAGGG---LEDFTVEVND-GEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL VI+DLV D+ Y++ R + ++ Sbjct: 64 AEINGRPRLLCMTRMSVFTREETITVTPLRAFPVIRDLVTDVGFNYTKAREVPAFVPPAD 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED + +C+ C C +C + N + GP L++ + Sbjct: 124 LGPG-EYRMMQEDVDRSQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAGDTGLDRSRTAQDEHGLGFCNITKCCTEVCPEGIRITDNALIPLKERAVDRK 240 >gi|154487073|ref|ZP_02028480.1| hypothetical protein BIFADO_00913 [Bifidobacterium adolescentis L2-32] gi|154084936|gb|EDN83981.1| hypothetical protein BIFADO_00913 [Bifidobacterium adolescentis L2-32] Length = 305 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 45/256 (17%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y V VLD LL +K IDPTL R SC G+CGS ++I+GT TL C Sbjct: 52 GKQWVQDYAVPA-RPEDTVLDCLLKVKRTIDPTLAFRYSCGHGMCGSDAVSINGTPTLLC 110 Query: 101 -------------------------------VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 D G I + PLP V +DL+ D+ Sbjct: 111 TATVKAWAKQPSDAQVDEDGFRHTGEDVQPAQTQDADDLGVIELAPLPGFPVQRDLIADI 170 Query: 130 SHFYSQHRSIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 Q R ++P+L+ A E LQ+ + K + L C+ C C SCP Sbjct: 171 DQMLDQIRKLKPYLQASGELATTADGKINAFEYLQNPQQLAKYELLSNCIACGTCEGSCP 230 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ CT+ CP+G+ Sbjct: 231 VY-AGGEAFIGPAALIAASRFINDSRDSQTDARMDAIDSADGIAACQSVRACTRECPRGI 289 Query: 242 NPAK----AIAKIKMM 253 + + IA+IK Sbjct: 290 DVGEEIWQLIAQIKER 305 >gi|148642453|ref|YP_001272966.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanobrevibacter smithii ATCC 35061] gi|148551470|gb|ABQ86598.1| fumarate reductase, iron-sulfur protein [Methanobrevibacter smithii ATCC 35061] Length = 493 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 9/233 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + + R++ + P ++ Y ++ VLD + I K D +++R SCR G CG Sbjct: 1 MIKVYVSRFDREVDSEPHLECYEIE-QTPQMKVLDAINAINEKYDADISIRSSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCG+ +G LAC KD+K + P + VIKDL+VD S + + ++ L Sbjct: 60 SCGILFNGNGALACQKDIK---DGAIIEP-QNFPVIKDLIVDKSQIEQEVKDLQLSLNPQ 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E+ + + C+ C C +CP + ++ GP I+ ++ D Sbjct: 116 RHDDNLNENLTPENIKNTKKVRSCIECYSCFATCPVIKFIKTKFGGPYIMRYLSKFESDP 175 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIKMMLLDRK 258 RDEF +RLD LY+C + C CPK +N AI +++ + Sbjct: 176 RDEF--DRLDE-SLKEGLYKCTSCGKCKAVCPKDINTFGDAIERLREIACKEG 225 >gi|239929141|ref|ZP_04686094.1| fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291437478|ref|ZP_06576868.1| fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291340373|gb|EFE67329.1| fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] Length = 258 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++++R + G ++ + V++++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FKVWRGD---VGGGGLEDFAVEVND-GEVVLDIIHRLQATQVPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL VI+DLV D+ Y++ R + ++ Sbjct: 64 AEINGRPRLLCMTRMSVFDRDETITVTPLRAFPVIRDLVTDVGFNYTKARQVPAFVPPEG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLI 204 P E ED ++ +C+ C C +C + + + GP L++ + Sbjct: 124 LGPG-EYRMMQEDVERPQEFRKCIECFLCQDTCHVVRDHEENKAAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D + +R +D L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAEENGLDRRRTAQDEHGLGYCNITKCCTEVCPEGIRITDNALIPLKERAVDRK 240 >gi|126666301|ref|ZP_01737280.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] gi|126629102|gb|EAZ99720.1| succinate dehydrogenase iron-sulfur subunit [Marinobacter sp. ELB17] Length = 152 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 78/128 (60%), Positives = 104/128 (81%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 H ++Q+ +I+PWL+ +P E LQS EDR K+DG YEC++C CC++ CPS+WWN DR+ Sbjct: 24 HAFAQYAAIKPWLQAEAPSSGIEHLQSPEDRSKLDGYYECILCFCCTSGCPSHWWNGDRF 83 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA+LLQA+R+L DSRD+ ERLD L+DPFRLYRCHTI+NCT++CPKGLNP KAIA+I Sbjct: 84 LGPAVLLQAWRFLADSRDQATSERLDELDDPFRLYRCHTILNCTRTCPKGLNPGKAIAEI 143 Query: 251 KMMLLDRK 258 K ++ R+ Sbjct: 144 KRKMITRQ 151 >gi|304314188|ref|YP_003849335.1| thiol:fumarate reductase, subunit B [Methanothermobacter marburgensis str. Marburg] gi|302587647|gb|ADL58022.1| thiol:fumarate reductase, subunit B [Methanothermobacter marburgensis str. Marburg] Length = 489 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + ++ R+ P P +++Y + VLD L I + + R SCR G CG Sbjct: 1 MINVKVLRFEPGVDEKPHLESYDIP-SKEKMKVLDALQLINKMYNANIAFRSSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + ++G LAC +++ + P+ + VIKDL+VD S + R++ +L++ Sbjct: 60 SCAVKMNGEVVLACR---AEVEDGAVIEPVD-LPVIKDLMVDRSEIEDKVRAMGLYLQSE 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + ED Q L C+ C C +SCP S Y GP + ++ D Sbjct: 116 ARGIQ---RIKPEDYQDTKKLRGCIECFSCISSCPVIKE-STEYAGPYFMRYISKFAFDP 171 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRK 258 RDE ER LY C T C + CPK LN P AI K++ M Sbjct: 172 RDEA--ER-AAGGVEEGLYCCTTCGKCAEVCPKELNVPGDAIEKLRAMACREG 221 >gi|288559912|ref|YP_003423398.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein SdhB [Methanobrevibacter ruminantium M1] gi|288542622|gb|ADC46506.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein SdhB [Methanobrevibacter ruminantium M1] Length = 508 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 11/234 (4%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R++ + P ++ Y ++ ++ G VLD L I K + ++ R SC+ G CG Sbjct: 1 MITVYVKRFDSEKDEEPHIEAYEIE-ESPGMKVLDALEEINRKYNADISFRSSCKAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCG+ I+G LAC +KD + + PL VIKDLVVD S + + ++ L Sbjct: 60 SCGVKINGNGALACKAQIKDNRL---IEPLD-FPVIKDLVVDRSSADEKVKQLQLSLNCD 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +D + + C+ C C ++CP + +LGP L ++ D Sbjct: 116 DETA--HEKLNPKDIKDTKKVRSCIECYTCLSTCPVVKHFKEDFLGPYYLRYLSKFDFDP 173 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 RDE +RL D +Y C + C CPK +N AI K++ M R + Sbjct: 174 RDES--DRLIEALDS-GMYNCTSCGKCGSICPKSINSFGDAIEKLRAMAYARDL 224 >gi|261349414|ref|ZP_05974831.1| thiol:fumarate reductase, iron-sulfur protein [Methanobrevibacter smithii DSM 2374] gi|288861776|gb|EFC94074.1| thiol:fumarate reductase, iron-sulfur protein [Methanobrevibacter smithii DSM 2374] Length = 493 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 9/233 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + + R++ + P ++ Y ++ VLD + I K D +++R SCR G CG Sbjct: 1 MIKVYVSRFDREVDSEPHLECYEIE-QTPQMKVLDAINAINEKYDADISIRSSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCG+ +G LAC KD+K + P + VIKDL+VD S + + ++ L Sbjct: 60 SCGILFNGNGALACQKDIK---DGAIIEP-QNFPVIKDLIVDKSQIEQEVKDLQLSLNPQ 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E+ + + C+ C C +CP + ++ GP I+ ++ D Sbjct: 116 RHDDDLNENLTPENIKNTKKVRSCIECYSCFATCPVIKFIKTKFGGPYIMRYLSKFESDP 175 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIKMMLLDRK 258 RDEF +RLD LY+C + C CPK +N AI +++ + Sbjct: 176 RDEF--DRLDE-SLKEGLYKCTSCGKCKAVCPKDINTFGDAIERLREIACKEG 225 >gi|229543628|ref|ZP_04432688.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus coagulans 36D1] gi|229328048|gb|EEN93723.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus coagulans 36D1] Length = 255 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLT 75 GE+ + I R NP+ P +T+ V + + K + + Sbjct: 2 GEQKTVTFIIQRQDNPE--SEPYDETFEVPYRPNMNVISALMEIRRNPVNAKGEKTTPVV 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G AC + ++ I + P+ V++DL +D + Sbjct: 60 WEMNCLEEVCGACSMVINGKPRQACSALVDKLQQPIRLAPMRTFPVVRDLQIDRGRMFDS 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ E + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 120 LKKVKAWIPIDGTYDLGEGPRMPEKKRQWAYELAKCMTCGVCLEACPNVNSRSN-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL+ + L C NC Q+CPKG+ +IA + Sbjct: 179 PLSQVRLFNAHPTGHMNRDERLEAIMGDGGLANCGNSQNCVQACPKGIPLTTSIAALNRE 238 >gi|41409795|ref|NP_962631.1| fumarate reductase iron-sulfur subunit [Mycobacterium avium subsp. paratuberculosis K-10] gi|254820423|ref|ZP_05225424.1| fumarate reductase iron-sulfur subunit [Mycobacterium intracellulare ATCC 13950] gi|41398627|gb|AAS06247.1| hypothetical protein MAP_3697c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 248 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 R++R + N + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 TMRVWRGD---DANGALQDFTVEVN-EGEVVLDIIHRLQQTQTPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 62 SAEINGYPRLLCMTRMSTFAEDEVVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFAPPK 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 E + ED Q+ +C+ C C C + N + GP L++ Sbjct: 122 D-LQPGEYRMAQEDVQRSQEFRKCIECFLCQNVCHVVRDHEENKKAFAGPRFLMRIAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R + ++ L C+ CT+ CP+ + A+ +K + DRK Sbjct: 181 MHPLD--TRDRRKDAQEEHGLGYCNITKCCTEVCPENIKITDNALIPMKERVADRK 234 >gi|58700201|ref|ZP_00374696.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533280|gb|EAL57784.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 167 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 95/164 (57%), Positives = 127/164 (77%), Gaps = 1/164 (0%) Query: 16 KIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLT 75 KI+ P KN++ ++IYRW+ D++ NP +DT+++D+D+CGPMVLD L+ IK++ID TLT Sbjct: 1 KIYPIPARAKNIRRFQIYRWSADDEKNPRIDTFFIDMDSCGPMVLDALIKIKDEIDSTLT 60 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLPHM VIKDLV D+S FY Q Sbjct: 61 FRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLPHMYVIKDLVSDLSQFYEQ 120 Query: 136 HRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCST 178 ++SI+PWL+ P + EDR+K+DGL +C++CACCST Sbjct: 121 YKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDCILCACCST 164 >gi|256827058|ref|YP_003151017.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cryptobacterium curtum DSM 15641] gi|256583201|gb|ACU94335.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cryptobacterium curtum DSM 15641] Length = 328 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 14/233 (6%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I R++ + Y VL L +I+ D TL +CR ICGSC + Sbjct: 19 IARFD---GTKSWVQEYSCPRQP--MTVLACLNFIREHQDQTLVFNEACRHAICGSCAVV 73 Query: 92 IDGTNTLACVKDMK-----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++G+ LAC ++ + + PL V++DL VD Q +++EPWL Sbjct: 74 VNGSACLACETQVEDLIELYETTRLFLSPLRGFPVLRDLAVDFDAKVEQMQTVEPWLHAY 133 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + QS E + + EC++C C++SC ++ YL P ++ +A+R+ DS Sbjct: 134 TDRTDSC--QSREQLDRYEKATECILCGICASSCCEMAFDEGGYLAPFVMNKAFRFERDS 191 Query: 207 RDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE G RL + L++C CT CPKG+ ++ IA ++ L R Sbjct: 192 RDEHGNGVRLKAVIASD-LWKCLHCQQCTTKCPKGIPVSEEIATLRRQALSRG 243 >gi|306823249|ref|ZP_07456625.1| succinate dehydrogenase iron-sulfur protein; fumarate dehydrogenase [Bifidobacterium dentium ATCC 27679] gi|309801628|ref|ZP_07695749.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium dentium JCVIHMP022] gi|304553881|gb|EFM41792.1| succinate dehydrogenase iron-sulfur protein; fumarate dehydrogenase [Bifidobacterium dentium ATCC 27679] gi|308221760|gb|EFO78051.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium dentium JCVIHMP022] Length = 328 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 112/258 (43%), Gaps = 47/258 (18%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y ++ VLD LL IK IDPTL R SC G+CGS + I+GT TL C Sbjct: 73 GKQWVQDYTLNA-RPEDTVLDCLLSIKRTIDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 131 Query: 101 VKDMKDIKGA---------------------------------IAVYPLPHMSVIKDLVV 127 +KD I + PLP V +DL+ Sbjct: 132 TATIKDWAKQPNGSMVDDEGFRHTGDAVAVEDGAADDSGSLGVIELAPLPGFPVQRDLIA 191 Query: 128 DMSHFYSQHRSIEPWLKTVSPK--------PAKELLQSHEDRQKIDGLYECVMCACCSTS 179 D+ Q R ++P+L+ A E LQ E K + L C+ C C S Sbjct: 192 DIDQMLDQIRRLKPYLQANGELATTAEGKIDAFEYLQRPEQLAKYEQLSNCIACGTCEGS 251 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ C++ CP+ Sbjct: 252 CPVY-AGGEAFIGPAALITASRFINDSRDTQASARMDAIDSADGIAACQSVRACSRECPR 310 Query: 240 GLNPAK----AIAKIKMM 253 G++ + IA+IK Sbjct: 311 GIDVGEEIWQLIAQIKER 328 >gi|222446048|ref|ZP_03608563.1| hypothetical protein METSMIALI_01697 [Methanobrevibacter smithii DSM 2375] gi|222435613|gb|EEE42778.1| hypothetical protein METSMIALI_01697 [Methanobrevibacter smithii DSM 2375] Length = 493 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 9/233 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + + R++ + P ++ Y ++ VLD + I K D +++R SCR G CG Sbjct: 1 MIKVYVSRFDREVDSEPHLECYEIE-QTPQMKVLDAINAINEKYDADISIRSSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCG+ +G LAC KD+K + P + VIKDL+VD S + + ++ L Sbjct: 60 SCGILFNGNGALACQKDIK---DGAIIEP-QNFPVIKDLIVDKSQIEQEVKDLQLSLNPQ 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E+ + + C+ C C +CP + ++ GP I+ ++ D Sbjct: 116 RHDDDLNENLTPENIKNTKKVRSCIECYSCFATCPVIKFIKTKFGGPYIMRYLSKFESDP 175 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIKMMLLDRK 258 RDEF +RLD LY+C + C CPK +N AI +++ + Sbjct: 176 RDEF--DRLDE-SLKEGLYKCTSCGKCKAVCPKDINTFGDAIERLREIACKEG 225 >gi|226311272|ref|YP_002771166.1| succinate dehydrogenase iron-sulfur subunit [Brevibacillus brevis NBRC 100599] gi|226094220|dbj|BAH42662.1| succinate dehydrogenase iron-sulfur protein [Brevibacillus brevis NBRC 100599] Length = 249 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 12/245 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTLTL 76 + L I R + P + + + G V+ L+ I+ + Sbjct: 2 AEKLIHLIITRQD-SPDSTPYKEEFKIPY-RPGMNVISALMEIQRNPLNAQGQKTSPVNW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ V +DL +D S + Sbjct: 60 ESNCLEEVCGACSMVINGRPRQACSALVDKLEQPIRLEPMSTFPVQRDLSIDRSRMFDAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E +RQ L +C+ C C +CP+ SD ++GP Sbjct: 120 KRVKAWVPIDGTHDLGPGPRMPEVERQWAYELSKCMTCGVCLEACPNVNAKSD-FIGPFA 178 Query: 196 LLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + Q + ERL+ L + + C NC Q+CPKG+ +IA + Sbjct: 179 ISQVRLFNQHPTGMMNKHERLEALMEDGGIGDCGNSQNCVQACPKGIPLTTSIAHMNKET 238 Query: 255 LDRKI 259 + Sbjct: 239 TKHAV 243 >gi|171743304|ref|ZP_02919111.1| hypothetical protein BIFDEN_02433 [Bifidobacterium dentium ATCC 27678] gi|171278918|gb|EDT46579.1| hypothetical protein BIFDEN_02433 [Bifidobacterium dentium ATCC 27678] Length = 328 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 47/258 (18%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y ++ +LD LL IK IDPTL R SC G+CGS + I+GT TL C Sbjct: 73 GKQWVQDYTLNA-RPEDTLLDCLLSIKRTIDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 131 Query: 101 VKDMKDIKGA---------------------------------IAVYPLPHMSVIKDLVV 127 +KD I + PLP V +DL+ Sbjct: 132 TATIKDWAKQPNSSMVDDEGFRHTGDAVAVEDGAADDSGSLGVIELAPLPGFPVQRDLIA 191 Query: 128 DMSHFYSQHRSIEPWLKTVSPK--------PAKELLQSHEDRQKIDGLYECVMCACCSTS 179 D+ Q R ++P+L+ A E LQ E K + L C+ C C S Sbjct: 192 DIDQMLDQIRRLKPYLQANGELATTAEGKIDAFEYLQRPEQLAKYEQLSNCIACGTCEGS 251 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ C++ CP+ Sbjct: 252 CPVY-AGGEAFIGPAALITASRFINDSRDTQASARMDAIDSADGIAACQSVRACSRECPR 310 Query: 240 GLNPAK----AIAKIKMM 253 G++ + IA+IK Sbjct: 311 GIDVGEEIWQLIAQIKER 328 >gi|15615653|ref|NP_243957.1| succinate dehydrogenase iron-sulfur subunit [Bacillus halodurans C-125] gi|10175713|dbj|BAB06810.1| succinate dehydrogenase iron-sulfur protein [Bacillus halodurans C-125] Length = 251 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 10/237 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLR 77 +N+ + I R + D +P + + V + + K + + Sbjct: 2 SENVVRFIITRQD-DPDSSPYEEEFQVPYRQNMNVISALMEIRRNPVNSKGETSTPVAWE 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ V++DLV+D S + + Sbjct: 61 MNCLEEVCGACSMVINGKPRQSCTALVDQLEQPIRLEPMKTFPVVRDLVIDRSRMFDSLK 120 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C +CP+ + ++GPA L Sbjct: 121 KVKAWIPIDGTYDLGPGPRMAESKRQWAYELSKCMTCGVCLEACPNVN-SKSEFIGPAPL 179 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 Q + E + ERL + L C NC QSCPKG+ +IA + Sbjct: 180 SQVRLFNAHPTGEMNKEERLQAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNR 236 >gi|2894538|emb|CAA04399.1| Thiol:fumarate reductase subunit B [Methanothermobacter thermautotrophicus] Length = 488 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + ++ R+ P P +++Y + VLD L I + + R SCR G CG Sbjct: 1 MINVKVLRFEPGVDEKPHLESYDIP-SKEKMKVLDALQLINKMYNANIAFRSSCRAGQCG 59 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + ++G LAC +++ + P+ + VIKDL+VD S + R++ +L++ Sbjct: 60 SCAVKMNGEVVLACR---AEVEDGAVIEPVD-LPVIKDLMVDRSEIEDKVRAMGLYLQSE 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + ED Q L C+ C C +SCP S Y GP + ++ D Sbjct: 116 ARGIQ---RIKPEDYQDTKKLRGCIECFSCISSCPVIKE-STEYAGPYFMRYISKFAFDP 171 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRK 258 RDE ER LY C T C + CPK LN P AI K++ M Sbjct: 172 RDEA--ER-AAGGVEEGLYCCTTCGKCAEVCPKELNVPGDAIEKLRAMACREG 221 >gi|119025610|ref|YP_909455.1| iron sulfur protein associated with succinate dehydrogenase [Bifidobacterium adolescentis ATCC 15703] gi|118765194|dbj|BAF39373.1| probable iron sulfur protein associated with succinate dehydrogenase [Bifidobacterium adolescentis ATCC 15703] Length = 305 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 45/256 (17%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y V VLD LL +K IDPTL R SC G+CGS ++I+GT TL C Sbjct: 52 GKQWVQDYVVPA-RPEDTVLDCLLKVKRTIDPTLAFRYSCGHGMCGSDAVSINGTPTLLC 110 Query: 101 -------------------------------VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 D G I + PLP V +DL+ D+ Sbjct: 111 TATVKAWAKQPSDAQVDEDGFRHTGEDVQPAQTQDADDLGVIELAPLPGFPVQRDLIADI 170 Query: 130 SHFYSQHRSIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 Q R ++P+L+ A E LQ+ + K + L C+ C C SCP Sbjct: 171 DQMLGQIRKLKPYLQASGELATTADGKINAFEYLQNPQQLSKYELLSNCIACGTCEGSCP 230 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ CT+ CP+G+ Sbjct: 231 VY-AGGEAFIGPAALIAASRFINDSRDGQTDARMDAIDSADGIAACQSVRACTRECPRGI 289 Query: 242 NPAK----AIAKIKMM 253 + + IA+IK Sbjct: 290 DVGEEIWQLIAQIKER 305 >gi|311031414|ref|ZP_07709504.1| succinate dehydrogenase iron-sulfur subunit [Bacillus sp. m3-13] Length = 254 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 14/242 (5%) Query: 22 TGEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPT 73 + +++ R + P+ G P +T+ + V+ L+ ++ Sbjct: 2 AEQTKTVTFKVKRQDGPE--GTPYYETFEL-AYRPNMNVISALMEVRRNPVNKDGKETTP 58 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 + +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 59 VNWDMNCLEEVCGACSMVINGKPRQSCTALVDQLEQPIVLEPMSTFPVVRDLQVDRSRMF 118 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C +CP+ + ++G Sbjct: 119 DSLKKVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVN-SKSEFIG 177 Query: 193 PAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 PA L Q + E + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 178 PAPLSQVRLFNAHPTGEMNKSERLEAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALN 237 Query: 252 MM 253 Sbjct: 238 RD 239 >gi|220919928|ref|YP_002495231.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium nodulans ORS 2060] gi|219952348|gb|ACL62739.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methylobacterium nodulans ORS 2060] Length = 244 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 10/232 (4%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 I+R + TY V VLD + +++ IDPTL+ R +CR G+CGSCG Sbjct: 11 VSIWRG----GHDGAFKTYTVP-SRENQTVLDVVTHVQRHIDPTLSYRFACRVGMCGSCG 65 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M ++G C + + + + PL ++ +IKDL DM F+ + + + Sbjct: 66 MTVNGRPRWTCRTHVSKVAKGGTLKIAPLSNLPIIKDLAADMRPFFEKWQKAGGVFEPSR 125 Query: 148 P--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P + + +R D EC+ C C C + WN + YLGPA L +A+ + D Sbjct: 126 TRWDPVEAIRPDEPERAAADAGIECINCGVCYAGCDTVRWN-NEYLGPAALNRAWTLMND 184 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RD Q RL + + CH+ +C + CP+ LNP +I+ +K M Sbjct: 185 RRDSGQEPRLAAVAASGGCHACHSHQSCQEFCPQSLNPTGSISLLKRMATKA 236 >gi|94968413|ref|YP_590461.1| fumarate reductase iron-sulfur subunit [Candidatus Koribacter versatilis Ellin345] gi|94550463|gb|ABF40387.1| succinate dehydrogenase subunit B [Candidatus Koribacter versatilis Ellin345] Length = 249 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 11/234 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +RI+R KG Y ++ G +VLD + I+ + + +R +C+ G CGSC Sbjct: 5 TFRIWRG---EKGQGQFQDYTTEVSA-GMVVLDAVHQIQAEQAGDMAVRWNCKAGKCGSC 60 Query: 89 GMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ + I + V P+ ++DLV D+S Y + I + Sbjct: 61 SAEINGMPKLMCMTRLNTIPLDKPVTVEPMKAFPHMRDLVTDVSWNYEVKKRIPKFQPRK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY--WWNSDRYLGPAILLQAYRWLI 204 P + ED ++ +C+ C C C D+++GP L+ + Sbjct: 121 PDAPDGTWRIAPEDVDRVQEFRKCIECFLCQDVCHVLRDHHMHDQFIGPRFLVYTAALEM 180 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDR 257 D +R + L F + C+ CT+ CP+ + AI +K ++DR Sbjct: 181 HPLDVG--DRAELLRKDFGVGLCNITKCCTKVCPENITITDNAIIPLKERVVDR 232 >gi|302536671|ref|ZP_07289013.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. C] gi|302445566|gb|EFL17382.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. C] Length = 260 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + + + + V++ + G +VLD + ++ L +R +C+ G CGSC Sbjct: 8 FRVWRGDAEGGD---LRDFTVEVHD-GEVVLDIVHRLQATQASDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + + PL VI+DLV D+S Y++ R + ++ Sbjct: 64 AEINGRPRLMCMTRMSVFGRDETVTITPLRAFPVIRDLVTDVSFNYAKAREVPAFVPPPG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E D ++ +C+ C C +C + N + GP L++ + Sbjct: 124 VAAG-EYRMQQVDVERSQEFRKCIECFLCQDTCHVVRDHEENKTAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAADAGLDRKRTAQEEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|254381881|ref|ZP_04997244.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. Mg1] gi|194340789|gb|EDX21755.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. Mg1] Length = 297 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +RI+R + + + + V++ + G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FRIWRGDTEGGE---LRDFTVEVHD-GEVVLDIVHRLQATQVPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGAIAV--YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ M + PL VI+DLV D+S Y + R + ++ Sbjct: 64 AEVNGRPRLMCMTRMSTFTREETISVTPLRAFPVIRDLVTDVSFNYRKAREVPAFVPPQG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P ED ++ +C+ C C +C + N + GP L++ + Sbjct: 124 VAPG-AYRMRQEDVERSQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D Q +R ++ L C+ CT+ CP+G+ A+ +K +DR Sbjct: 183 HPLDAAQEAGLDRKRAAQEDHGLGLCNITKCCTEVCPEGIKITDNALIPLKERAVDRA 240 >gi|15679838|ref|NP_276956.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2622985|gb|AAB86316.1| fumarate reductase [Methanothermobacter thermautotrophicus str. Delta H] Length = 492 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 13/236 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 E + R+ R+ P P +++Y + VLD L I + R SCR G Sbjct: 2 EMEMINIRVLRFEPGVDEKPHLESYEIP-SKEKMKVLDALQLINKIHGANIAFRSSCRAG 60 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 CGSC + ++G LAC +++ + P+ + VIKDL+VD + +S++ +L Sbjct: 61 QCGSCAVKMNGEVVLACR---AEVEDGAIIEPID-LPVIKDLMVDRGEIEEKVKSMQLYL 116 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + S ED L C+ C C +SCP S Y GP + ++ Sbjct: 117 QASSEGIQ---RIRPEDYLDSKKLRGCIECFSCISSCPVIKE-SSEYAGPYFMRYLSKFA 172 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRK 258 D RD G+R D LY C T C + CPK LN P AI K++ M Sbjct: 173 FDPRD--TGDRAQEGVDK-GLYCCTTCGKCAEVCPKELNVPGDAIEKLRAMACREG 225 >gi|254390244|ref|ZP_05005463.1| fumarate reductase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|294814801|ref|ZP_06773444.1| fumarate reductase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|326443180|ref|ZP_08217914.1| fumarate reductase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|197703950|gb|EDY49762.1| fumarate reductase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] gi|294327400|gb|EFG09043.1| fumarate reductase iron-sulfur subunit [Streptomyces clavuligerus ATCC 27064] Length = 255 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + D + + V++ + G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FRVWRGDQDGGE---LADFSVEVHD-GEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL V++DLV D+S Y++ R + ++ Sbjct: 64 AEINGRPRLLCMTRMSVFSRTETITVTPLRAFPVVRDLVTDVSFNYTKAREVPAFVPPQG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E D + +C+ C C +C + N + GP L++ + Sbjct: 124 VAPG-EYRMQQMDVDRSQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+G+ A+ +K +DRK Sbjct: 183 HPLDAAAASGLDRKRTAQEEHGLGYCNITKCCTEVCPEGIKITDNALIPLKERAVDRK 240 >gi|289642826|ref|ZP_06474963.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia symbiont of Datisca glomerata] gi|289507395|gb|EFD28357.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia symbiont of Datisca glomerata] Length = 252 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 12/233 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + D+ + Y V ++ G +VLD L ++ P L +R +C+ G CGSC Sbjct: 8 LRVWRGDADSGD---LQDYTVGVE-EGMVVLDALHRLQQTQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ + + V PL VI+DLV D+S+ Y + + + Sbjct: 64 AEVNGRPRLTCMTRLNLFAPTDTVTVTPLRTFPVIRDLVTDVSYNYEKAAQVPAFAPGAP 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 D ++ C+ C C T C + N + GP ++++ + Sbjct: 124 AGDDGHHRMKQSDVDRVQEFRTCIECFLCQTVCHVIRDHEENKPVFAGPRLMIRYAELEM 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLD 256 D +R D L + C+ CT+ CP+ ++ AI +K ++D Sbjct: 184 HPLD--THDRRDLLRGQADIGYCNITKCCTEVCPEHISITDNAIIPLKERVVD 234 >gi|23099567|ref|NP_693033.1| succinate dehydrogenase iron-sulfur subunit [Oceanobacillus iheyensis HTE831] gi|22777797|dbj|BAC14068.1| succinate dehydrogenase iron-sulfur protein [Oceanobacillus iheyensis HTE831] Length = 254 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLT 75 E++ + I R + P+ P +T+ + + + K + + Sbjct: 2 AEQSKVTFIITRQDGPE--STPYEETFEIPYRQNMNVISALMEIRQNPVNNKGENTTPVM 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+GT +C + ++ I + P+ V++DL+VD + Sbjct: 60 WDMNCLEEVCGACSMVINGTARQSCAALVDQLEQPIRLEPMSTFPVVRDLIVDRERMFDA 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E+ RQ L +C+ C C +CP+ NS+ ++GPA Sbjct: 120 LKQVKAWIPIDGTHDLGPGPRMPENKRQWAYELSKCMTCGVCLEACPNVNDNSN-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + QA + E +RL+ L + + C NC Q CPKG+ +IA + Sbjct: 179 AISQARLFNAHPTGEMNASDRLNGLMEDGGIDGCGNSQNCVQVCPKGIPLTTSIAAMNRA 238 >gi|83951343|ref|ZP_00960075.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Roseovarius nubinhibens ISM] gi|83836349|gb|EAP75646.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Roseovarius nubinhibens ISM] Length = 236 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 9/235 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + ++R + + + V +LD + +I+ DPTLT R +CR G+CG Sbjct: 1 MLRVSVWRGTAEGGA---YEEFEVP-QQDNQTILDVVSWIQQYADPTLTYRFACRVGMCG 56 Query: 87 SCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 SC M ++G C +K + + + PL ++ VIKDL DM F+ + Sbjct: 57 SCAMMVNGKPRWTCRTHVKKVTEGGALTIAPLRNLPVIKDLAADMDPFFDKWVKAGGHHH 116 Query: 145 TVSPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + + + E R + + EC+ C+ C SC + N D YLGPA L +A+ Sbjct: 117 PSASRHDPMPVITSETPGRVEANAGIECINCSVCYASCDTVAGNPD-YLGPAALQRAWTL 175 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D+++ + LD + + CH+ +CT CP L+P AIA +K R Sbjct: 176 YNDAKEADREAVLDRVSGAGGCHNCHSQGSCTLYCPNELDPLSAIAGLKRASAKR 230 >gi|89098907|ref|ZP_01171787.1| succinate dehydrogenase [Bacillus sp. NRRL B-14911] gi|89086311|gb|EAR65432.1| succinate dehydrogenase [Bacillus sp. NRRL B-14911] Length = 253 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLT 75 E ++I R + P + + + V+ L+ I K + + Sbjct: 2 SENKTVTFQITRQD-SPDSAPYQEEFKL-AYRPNMNVISALMEIRRNPVNSKGESTTPIA 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 60 WDMNCLEEVCGACSMIINGKPRQSCTALVDKLEQPIRLEPMRTFPVVRDLQVDRSRMFDS 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C +CP+ +D ++GPA Sbjct: 120 LKKVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNSKAD-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + E + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 179 PLSQVRLFNAHPTGEMNKSERLEQIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|108802868|ref|YP_642805.1| fumarate reductase iron-sulfur subunit [Rubrobacter xylanophilus DSM 9941] gi|108764111|gb|ABG02993.1| succinate dehydrogenase subunit B [Rubrobacter xylanophilus DSM 9941] Length = 272 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 14/239 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 G + +I+R + Y + L G ++LD +LYI+ L +R +C+ Sbjct: 21 GTGRTAKLKIFRGDASGGEE---VEYEIPL-VEGMVILDAVLYIQAHQANDLAVRWNCKA 76 Query: 83 GICGSCGMNIDGTNTLACVKDMKDIK-GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 CGSC I+G L C +++ + I V P+ VIKDLV D+S Y I P Sbjct: 77 AHCGSCSAEINGIPRLMCKTRVEEFEGREIHVGPMRAFPVIKDLVSDVSWNYEVSSKITP 136 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD--RYLGPAILLQA 199 + + ED +++ +C+ C C C + + GP ++ Sbjct: 137 FTTSQKAPFTMY----EEDVERLYEPKKCIECFMCQDVCHVLRTHHKHPEFAGPRFFVRN 192 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDR 257 + DE +RL +L++ L C+ CT+ CP G+ +I +K + D Sbjct: 193 QWLEMHPMDEA--DRLGDLKEKNGLGYCNITKCCTEVCPVGIKITDNSIIPLKERVADE 249 >gi|325525110|gb|EGD03001.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia sp. TJI49] Length = 164 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 79/163 (48%), Positives = 118/163 (72%), Gaps = 2/163 (1%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY +++ M+LD L+ +K +D TL+ RRSCREG+CGS Sbjct: 4 RIFEIYRYDPDKDAAPRMQTYELEI-QHERMLLDALVKLKA-LDETLSFRRSCREGVCGS 61 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+VDM+ F++Q+ SI+P+L + Sbjct: 62 DAMNINGKNGLACLTNLNDLPQKIVLRPLPGLPVVRDLIVDMTDFFNQYHSIKPYLINDA 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 P P KE LQS E+R ++DG+YEC++CA CSTSCPS+WWN D++ Sbjct: 122 PPPEKERLQSPEERDELDGVYECILCASCSTSCPSFWWNPDKF 164 >gi|283455723|ref|YP_003360287.1| Succinate dehydrogenase iron-sulfur protein [Bifidobacterium dentium Bd1] gi|283102357|gb|ADB09463.1| SdhB Succinate dehydrogenase iron-sulfur protein [Bifidobacterium dentium Bd1] Length = 301 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 47/258 (18%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y ++ +LD LL IK IDPTL R SC G+CGS + I+GT TL C Sbjct: 46 GKQWVQDYTLNA-RPEDTLLDCLLSIKRTIDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 104 Query: 101 VKDMKDIKGA---------------------------------IAVYPLPHMSVIKDLVV 127 +KD I + PLP V +DL+ Sbjct: 105 TATIKDWAKQPNSSMVDDEGFRHTGDAVAVEDGAADDSGSLGVIELAPLPGFPVQRDLIA 164 Query: 128 DMSHFYSQHRSIEPWLKTVSPK--------PAKELLQSHEDRQKIDGLYECVMCACCSTS 179 D+ Q R ++P+L+ A E LQ E K + L C+ C C S Sbjct: 165 DIDQMLDQIRRLKPYLQANGELATTAEGKIDAFEYLQRPEQLAKYEQLSNCIACGTCEGS 224 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ C++ CP+ Sbjct: 225 CPVY-AGGEAFIGPAALITASRFINDSRDTQASARMDAIDSADGIAACQSVRACSRECPR 283 Query: 240 GLNPAK----AIAKIKMM 253 G++ + IA+IK Sbjct: 284 GIDVGEEIWQLIAQIKER 301 >gi|291302965|ref|YP_003514243.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Stackebrandtia nassauensis DSM 44728] gi|290572185|gb|ADD45150.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Stackebrandtia nassauensis DSM 44728] Length = 254 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 12/237 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +R++R + + + V+++ G +VLD + ++ P L +R +C+ G CGS Sbjct: 5 RHFRVWRGD---DEGGELTDFTVEVN-EGEVVLDVIHRLQATQAPDLAVRWNCKAGKCGS 60 Query: 88 CGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 C I+G L C+ M I V P+ VI+DLV D+S+ Y + R++ + Sbjct: 61 CSAEINGRPRLLCMTRMNLFGDDETITVTPVRTFPVIRDLVTDVSYNYDKARAMPAFAPP 120 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRW 202 +P E D ++ +C+ C C +C + N + GP + ++A Sbjct: 121 SDLEPG-EYRMQQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKPDFSGPRMFIRAAEL 179 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + DE + +R + + L C+ CT+ CP+ + AI +K ++DRK Sbjct: 180 DMHPLDE-RDDRKELAQAEQGLGYCNITKCCTEVCPEHIKITDNAIIPMKERVVDRK 235 >gi|271969656|ref|YP_003343852.1| fumarate reductase iron-sulfur subunit [Streptosporangium roseum DSM 43021] gi|270512831|gb|ACZ91109.1| fumarate reductase iron-sulfur subunit [Streptosporangium roseum DSM 43021] Length = 253 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R G ++ + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 KFRVWRG---EGGEGKLEDFTVEVN-EGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M I+G L C+ M I V P+ VIKDLV D+S Y + R I + Sbjct: 62 SMEINGRPKLGCMTRMSTFTEDETITVTPMRTFPVIKDLVTDVSFNYQKAREIPSFTPPA 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 KP E D ++ +C+ C C+ C + N + GP L++ Sbjct: 122 DVKPG-EYRMQQIDVERSQEFRKCIECFMCNNVCHVIRDHEENKTNFAGPRFLMRIAELD 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R D+ ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 181 MHPYDVA--DRKDSAQEEHGLGYCNITKCCTEVCPEHIKITDNALIPMKERVVDRK 234 >gi|153878087|ref|ZP_02004479.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Beggiatoa sp. PS] gi|152065449|gb|EDN65521.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein [Beggiatoa sp. PS] Length = 134 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 95/134 (70%), Positives = 112/134 (83%), Gaps = 1/134 (0%) Query: 126 VVDMSHFYSQHRSIEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + D+++FY+Q+ SI+PW P P +E+LQS EDR +DGLYEC++CACCSTSCPSYW Sbjct: 1 MPDLTYFYAQYASIKPWLETQTQPPPDREILQSKEDRALLDGLYECILCACCSTSCPSYW 60 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WN DRYLGPAILLQAYRW+ DSRDE GERLDNLEDPFRLYRCHTIMNCT +CPK LNPA Sbjct: 61 WNGDRYLGPAILLQAYRWIADSRDEMTGERLDNLEDPFRLYRCHTIMNCTNTCPKSLNPA 120 Query: 245 KAIAKIKMMLLDRK 258 KAI +IK ML+ R+ Sbjct: 121 KAIIEIKKMLVQRR 134 >gi|145220999|ref|YP_001131677.1| fumarate reductase iron-sulfur subunit [Mycobacterium gilvum PYR-GCK] gi|315442030|ref|YP_004074909.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1] gi|145213485|gb|ABP42889.1| succinate dehydrogenase subunit B [Mycobacterium gilvum PYR-GCK] gi|315260333|gb|ADT97074.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1] Length = 251 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 12/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R + + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 KLRVWRGD---DTGGELKDFTVEVN-EGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSC 62 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V PL V++DLV D+S Y + R I + Sbjct: 63 SAEINGRPRLLCMTRMSTFGEDEVVTVTPLRTFPVMRDLVTDVSFNYEKAREIPAFTPPK 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWL 203 E ED + +C+ C C C + + + GP L++ Sbjct: 123 D-LQPGEYRMQQEDVNRSQEFRKCIECFLCQNVCHVVRDHEENKLAFSGPRFLMRQAELD 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D G R + ++ L C+ CT+ CP+ + A+ +K DRK Sbjct: 182 MHPLDT-HGHRSEQAQEENGLGYCNITKCCTEVCPEHIKITDNALIPMKERAADRK 236 >gi|134096479|ref|YP_001101554.1| fumarate reductase iron-sulfur protein FrdB [Herminiimonas arsenicoxydans] gi|133740382|emb|CAL63433.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Herminiimonas arsenicoxydans] Length = 238 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +++R K + +Y V VLD + YI+ +D TL+ R SCR G+CGSC Sbjct: 6 KVKVWRG----KQDGAFVSYEVP-RRESQTVLDVVTYIQRHLDSTLSYRFSCRVGMCGSC 60 Query: 89 GMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 M ++G C + + G + + PL ++ V+KDL DMS F+ + + K Sbjct: 61 AMTVNGVARWTCRTHVSKVASNGELEIAPLSNLPVVKDLATDMSEFFDKWARGKGQFKGT 120 Query: 147 SPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + + + + R EC+ C C SC W +LGPA L +A+ + Sbjct: 121 RTRHEEFASVDPASKARVAASAGIECIGCGVCYASCDVVTWRP-AFLGPAALNRAWTLVN 179 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D RD Q ERL + + CHT +CTQ CPK + P I Sbjct: 180 DVRDANQEERLRAVAGDSGCHACHTQGSCTQRCPKQIAPTAGI 222 >gi|329939540|ref|ZP_08288841.1| fumarate reductase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] gi|329301110|gb|EGG45005.1| fumarate reductase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] Length = 256 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + + + V+++ G +VLD + I+ P L +R +C+ G CGSC Sbjct: 8 FRVWRGDVHGGD---LADFRVEVN-EGEVVLDIIHRIQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKG--AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL V++DLV D+ Y++ R + ++ Sbjct: 64 AEINGRPRLMCMTRMSVFDRAETITVTPLRAFPVVRDLVTDVGFNYAKAREVPAFVPPA- 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E ED + +C+ C C +C + N + GP L++ + Sbjct: 123 ELGPGEYRMMQEDVDRSQEFRKCIECFLCQDTCHVVRDHEENKPAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D + +R +D L C+ CT+ CP+G++ A+ +K DRK Sbjct: 183 HPLDAAEDTGLDRKRTAQDEHGLGYCNITKCCTEVCPEGIHITDNALIPLKERAADRK 240 >gi|283783330|ref|YP_003374084.1| putative succinate dehydrogenase iron-sulfur subunit [Gardnerella vaginalis 409-05] gi|283441615|gb|ADB14081.1| putative succinate dehydrogenase iron-sulfur subunit [Gardnerella vaginalis 409-05] Length = 358 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 56/272 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + + +LD LL IK IDPTL R SC G+CGS N++G TL C Sbjct: 87 GKHWVQDYSLRVHSTD-TILDCLLAIKRTIDPTLAFRYSCGHGVCGSDAANVNGMPTLLC 145 Query: 101 ----------------------------------------------VKDMKDIKGAIAVY 114 G I + Sbjct: 146 SATIGANARPESTNSVQSRGFRKTGTTSSSAQSTKSPTLQQKSKETTTLQNGTFGVIELA 205 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLK--------TVSPKPAKELLQSHEDRQKIDG 166 PL +V +DL+ D+S SQ + +EP+L+ T E LQ E+ +K + Sbjct: 206 PLSGFAVQRDLICDISPMISQIKRLEPYLQASNVSTRNTEGKLQLIEFLQHPEELKKFEL 265 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+MC C CP Y + ++GPA L+ A R++ DSRD RLD ++ + Sbjct: 266 LSNCIMCGACEGICPIY-AGGEAFIGPAALVNAARFIYDSRDNATEHRLDLIDSSDGISA 324 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++ C++ CP+G++ + I ++ ++ +RK Sbjct: 325 CQSVRACSRQCPRGIDIGEEIWQLTTLVNERK 356 >gi|323440700|gb|EGA98410.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus O11] gi|323442357|gb|EGA99986.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus O46] Length = 271 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK + Sbjct: 14 TQSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPINIKGEKTT 72 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 73 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 133 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 191 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 192 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 251 Query: 251 KMM 253 Sbjct: 252 NRE 254 >gi|256375565|ref|YP_003099225.1| fumarate reductase iron-sulfur subunit [Actinosynnema mirum DSM 43827] gi|255919868|gb|ACU35379.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Actinosynnema mirum DSM 43827] Length = 249 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + M+ + V+++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 7 FRVWRGDASGGA---MEDFTVEVN-EGEVVLDVIHRLQATQAADLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G L C+ M + V P+ VI+DLV D+S Y++ R + + Sbjct: 63 AEVNGRPRLLCMTRMSVFAEDETVTVTPMRAFPVIRDLVTDVSFNYAKAREVPAFRPPED 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 +P E + D ++ +C+ C C +C + N + + GP L++ + Sbjct: 123 LEPG-EYRMAQVDVERSQEFRKCIECFLCQDTCHVVRDHEENKEAFSGPRFLMRVAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R++ L C+ CT+ CP+ + A+ +K L DR+ Sbjct: 182 HPLD--TADRVEAARSEHGLGLCNITKCCTEVCPEHIAITDNALIPLKERLADRR 234 >gi|302525503|ref|ZP_07277845.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. AA4] gi|302434398|gb|EFL06214.1| fumarate reductase iron-sulfur subunit [Streptomyces sp. AA4] Length = 250 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R + + + V+++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 6 KFRVWRGDATGGD---LQDFTVEVN-EGEVVLDIIHRLQATQAADLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M A + V P+ VI+DLV D+S Y++ R I + Sbjct: 62 SAEINGRPRLLCMTRMSTFTEAEVVTVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPPE 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 KP + D ++ +C+ C C +C + N + + GP L++ Sbjct: 122 GLKPGEY-RMQQVDVERSQEFRKCIECYLCQNTCHVVRDHEENKEAFAGPRYLMRIAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R D +D L C+ CT+ CP+G++ A+ +K + DRK Sbjct: 181 MHPLDVA--DRRDAAQDEHGLGFCNITKCCTEVCPEGIHITDNALIPMKERVADRK 234 >gi|297562856|ref|YP_003681830.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847304|gb|ADH69324.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 263 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 14/237 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +R++R G + Y V+++ G +VLD L ++ P L +R +C+ G CGS Sbjct: 4 RVFRVWRG----SGEGGLAEYRVEVN-EGEVVLDVLHRLQATQTPDLAVRWNCKAGKCGS 58 Query: 88 CGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 C + I+G L+C+ M + + V P+ V++DLV D+S+ Y + R I + Sbjct: 59 CSVEINGRPRLSCMTRMSVFEDDEVVTVTPMRAFPVVRDLVCDVSYNYQKAREIPSFTP- 117 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRW 202 K + S ED ++ +C+ C C+ +C + N + + GP L++ Sbjct: 118 DPAKAPGDFRMSQEDVERQQEFRKCIECFLCNNTCHVIRDHEENKEHFSGPRYLMRVAEL 177 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R ++ F L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 178 EMHPED--TADRRLIAQEEFGLGYCNITKCCTEVCPENIRITDNALIPLKERVVDRK 232 >gi|283770210|ref|ZP_06343102.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus H19] gi|283460357|gb|EFC07447.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus H19] Length = 271 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK + Sbjct: 14 TQSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTS 72 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 73 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 133 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 191 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 192 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 251 Query: 251 KMM 253 Sbjct: 252 NRE 254 >gi|296109645|ref|YP_003616594.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus infernus ME] gi|295434459|gb|ADG13630.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanocaldococcus infernus ME] Length = 469 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I R ++ Y V + VL+ L YI + + R SCR CG Sbjct: 3 MITIKINR-------EGKIEKYKVPENLT---VLEALEYINREYGANIKFRASCRNSQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+G+ LAC +KD + + PL V+KDL+VD +Y + +SI ++ Sbjct: 53 SCALTINGSPRLACETLVKDN---MLIEPLRGFRVVKDLIVDREPYYQKLKSIRNYIVRK 109 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E ++ E +K L C+ C C ++CP+ +S + G ++ Q R+ +D Sbjct: 110 KLPNGLEEIEESE-VEKTKELRACIDCLSCLSTCPAR--SSSNFPGATVMRQLLRFSLDK 166 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RDE ER+ E+ LY C T +C + CP + +AI K++ + + Sbjct: 167 RDEEDRERIAFFEN---LYFCTTCSSCVEVCPMNIKLERAIEKLRELAFKKG 215 >gi|152989763|ref|YP_001355485.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Nitratiruptor sp. SB155-2] gi|151421624|dbj|BAF69128.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Nitratiruptor sp. SB155-2] Length = 234 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 15/223 (6%) Query: 29 EYRIYRWNPDNKGNPCMD-TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++ R++P P +D Y + +L+ L YIK + D TLT CR G+CGS Sbjct: 2 KIKVRRYHPQF-EPPSIDMEYEIP---PQLTLLESLEYIKKEKDRTLTFSSMCRSGVCGS 57 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C M ++G LAC + + V PL + V++DLVVD ++ + + Sbjct: 58 CAMRVNGKEVLACEYRV---QEGDFVEPLQNSEVLRDLVVDGQKALETLKNAKAY----- 109 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P +E D ++ + +C++C C +SCP Y N D +LGP L +AYR++ID+R Sbjct: 110 PLSMQEKQLQESDIEQFEKQSDCILCQSCYSSCPVYETN-DSFLGPFALTRAYRYVIDAR 168 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +E + E +D + ++ C NCT CP+G++P I + Sbjct: 169 EEEKKEHIDAVV-RNGIWDCTLCGNCTIVCPQGIDPKNDILML 210 >gi|312140081|ref|YP_004007417.1| succinate dehydrogenase iron-sulfur subunit sdhb1 [Rhodococcus equi 103S] gi|311889420|emb|CBH48737.1| succinate dehydrogenase iron-sulfur subunit SdhB1 [Rhodococcus equi 103S] Length = 251 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++RI+R + G + Y V+++ G +VLD + I+ L +R +C+ G CGSC Sbjct: 6 KFRIWRGDASGGG---LQDYAVEVN-EGEVVLDIIHRIQATQAADLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V P+ VI+DLV D+S Y++ R I + Sbjct: 62 SAEINGRPRLMCMTRMSTFAEDEVVTVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPPP 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS---DRYLGPAILLQAYRWL 203 E D Q+ +C+ C C +C + D + GP L++ Sbjct: 122 G-LAPGEYRMKQVDVQRSQEFRKCIECFLCQNTCHVVRDHDENKDAFAGPRYLMRVAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R D +D F L C+ CT CP+ ++ A+ +K + DR+ Sbjct: 181 MHPLDVA--DRRDAAQDDFGLGLCNITKCCTDVCPEDIHITDNALIPMKERVADRR 234 >gi|258423808|ref|ZP_05686694.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9635] gi|257846040|gb|EEV70068.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9635] Length = 271 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK + Sbjct: 14 TQSKTKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTT 72 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 73 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 133 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 191 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 192 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 251 Query: 251 KMM 253 Sbjct: 252 NRE 254 >gi|240168471|ref|ZP_04747130.1| fumarate reductase iron-sulfur subunit [Mycobacterium kansasii ATCC 12478] Length = 248 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + G + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 LRVWRGD---DGGGELRDFTVEVN-EGEVVLDVIHRLQQTQTPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 63 AEINGRPRLMCMTRMSTFAEDEVVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFAPPKD 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E + D Q+ +C+ C C C + N + GP L++ + Sbjct: 123 -LQPGEYRMAQADVQRSQEFRKCIECFLCQDVCHVIRDHEENKQAFAGPRFLMRIAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 182 HPLD--TRDRRKEAQEAHGLGYCNITKCCTEVCPENIKITDNALIPMKERVVDRK 234 >gi|317129846|ref|YP_004096128.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus cellulosilyticus DSM 2522] gi|315474794|gb|ADU31397.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus cellulosilyticus DSM 2522] Length = 253 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 13/240 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTLTL 76 + I R D P +T+ + V+ L+ I+ ++ Sbjct: 2 SGKTIKIIITRQK-DMDSAPYKETFELPY-RENMNVISALMEIRRNPVNADGKETTAVSW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SC E +CG+C M I+G +C + ++ I + P+ V++DLVVD S + Sbjct: 60 DSSCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPMNTFPVVRDLVVDRSRMFDSL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + ++GPA Sbjct: 120 KRVKAWVPIDGTYDLGPGPRMPESKRQWAYELSKCMTCGVCLQACPNVN-SKSEFIGPAA 178 Query: 196 LLQAYRWLIDSRDEFQG-ERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + ERL + D L C NC Q+CPKG+ +IA + Sbjct: 179 LSQVRLFNNHPTGAMHKTERLQTIMDGEGGLTNCGNSQNCVQACPKGIPLTTSIASLNRE 238 >gi|295695306|ref|YP_003588544.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus tusciae DSM 2912] gi|295410908|gb|ADG05400.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus tusciae DSM 2912] Length = 249 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 10/239 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLR 77 + I R + P + + V + C + + K + + Sbjct: 2 SEKTIRLIIQRQD-TPDSKPYDEEFEVPYRPNMNVIACLMEIQRNPVNAKGESVSPVVWE 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G AC + ++ + + P+ V++DLVVD S + + Sbjct: 61 SNCLEEVCGACSMVINGRPRQACTALVDQLEQPVRLQPMRTFPVVRDLVVDRSRMFEALK 120 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I+ W+ + E DRQ L +C C CC +CP+ + ++GP + Sbjct: 121 KIKAWIPIDGTYDLGPGPRMPERDRQWAYELSKCFTCGCCVEACPNVN-DKTSFMGPFAI 179 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q + + + ERL+ + ++ C NC Q CPKG+ +IA + + Sbjct: 180 SQVRLFNTHPTGKMHREERLEAMMGEGGIHECGNAQNCVQVCPKGIPLTTSIAAVNREV 238 >gi|331698355|ref|YP_004334594.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudonocardia dioxanivorans CB1190] gi|326953044|gb|AEA26741.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudonocardia dioxanivorans CB1190] Length = 256 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + + Y +++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 7 FRVWRGD---SEKGELVDYPAEVN-EGEVVLDIIHRLQQTEAQDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M I+G LAC+ M + V PL VI+DLV D+S Y++ R I + Sbjct: 63 MEINGRPRLACMTRMNTFAEDEVVTVTPLRTFPVIRDLVTDVSFNYTKAREIPSFAPPEG 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 +P E D ++ +C+ C C +C + N + + GP L++ + Sbjct: 123 VEPG-EYRMQQVDVERSQEFRKCIECYLCQNTCHVVRDHEENKEAFAGPRYLMRIAELDM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R +D L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 182 HPLDSA--DRQTAAQDEHGLGYCNITKCCTEVCPEHIKITDNALIPLKERVVDRK 234 >gi|304406628|ref|ZP_07388283.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus curdlanolyticus YK9] gi|304344161|gb|EFM10000.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus curdlanolyticus YK9] Length = 254 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID-------PTLTL 76 + I R + P + + V V+ L+ I+ + Sbjct: 7 AAKTVKLVISRQD-GPDSAPYTEEFEVPY-RSNMNVISALMEIQRNPKKTDGADTAPVCW 64 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ V++DLV++ ++ Sbjct: 65 ESNCLEEVCGACSMVINGKPRQACSALIDKLEQPIRLEPMRTFPVVRDLVINRERMFNAL 124 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ S ++GPA Sbjct: 125 KRVKAWIPIDGTYDLGPGPRMAETKRQWAYELSKCMTCGVCLESCPNVNDRSS-FIGPAA 183 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + QA + E + ERLD L + + C NC ++CPKG+ +IA I Sbjct: 184 ISQARLFNTHPTGEMHKEERLDALMEDGGIEGCGNSQNCVRACPKGIPLTTSIAAINKD 242 >gi|108797232|ref|YP_637429.1| fumarate reductase iron-sulfur subunit [Mycobacterium sp. MCS] gi|119866317|ref|YP_936269.1| fumarate reductase iron-sulfur subunit [Mycobacterium sp. KMS] gi|126432855|ref|YP_001068546.1| fumarate reductase iron-sulfur subunit [Mycobacterium sp. JLS] gi|108767651|gb|ABG06373.1| succinate dehydrogenase subunit B [Mycobacterium sp. MCS] gi|119692406|gb|ABL89479.1| succinate dehydrogenase subunit B [Mycobacterium sp. KMS] gi|126232655|gb|ABN96055.1| succinate dehydrogenase subunit B [Mycobacterium sp. JLS] Length = 250 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 12/234 (5%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 R++R + + Y V+++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 8 RVWRGD---DEGGALQDYTVEVN-EGEVVLDIIHRLQQTQTGDLAVRWNCKAGKCGSCSA 63 Query: 91 NIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 64 EINGRPRLLCMTRMSTFGESETVTVTPLRAFPVIRDLVTDVSFNYEKAREIPSFTPPKD- 122 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLID 205 E + ED + +C+ C C +C + N + GP L++ + Sbjct: 123 LQPGEYRMAQEDVNRSQEFRKCIECFLCQNTCHVVRDHEENKKEFAGPRYLMRMAELDMH 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D R ++ ++ L C+ CT+ CP+ + A+ +K + DRK Sbjct: 183 PLD-VHARRAEDSQEVHGLGYCNITKCCTEVCPEHIKITDNALIPMKERVADRK 235 >gi|15926733|ref|NP_374266.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus N315] gi|21282761|ref|NP_645849.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MW2] gi|49485987|ref|YP_043208.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57634627|ref|NP_371673.2| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus Mu50] gi|57650259|ref|YP_186023.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus COL] gi|82750756|ref|YP_416497.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus RF122] gi|87161509|ref|YP_493746.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194851|ref|YP_499649.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267641|ref|YP_001246584.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus JH9] gi|150393696|ref|YP_001316371.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus JH1] gi|151221274|ref|YP_001332096.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156979471|ref|YP_001441730.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus Mu3] gi|161509324|ref|YP_001574983.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140453|ref|ZP_03564946.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317068|ref|ZP_04840281.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731763|ref|ZP_04865928.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733614|ref|ZP_04867779.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus TCH130] gi|255005935|ref|ZP_05144536.2| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795121|ref|ZP_05644100.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9781] gi|258407171|ref|ZP_05680320.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9763] gi|258421738|ref|ZP_05684659.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9719] gi|258432918|ref|ZP_05688607.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9299] gi|258443408|ref|ZP_05691751.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A8115] gi|258446081|ref|ZP_05694243.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A6300] gi|258449806|ref|ZP_05697904.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A6224] gi|258451846|ref|ZP_05699867.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A5948] gi|258454905|ref|ZP_05702868.1| succinate dehydrogenase subunit B [Staphylococcus aureus A5937] gi|262048730|ref|ZP_06021612.1| succinate dehydrogenase [Staphylococcus aureus D30] gi|269202762|ref|YP_003282031.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ED98] gi|282894177|ref|ZP_06302408.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8117] gi|282916398|ref|ZP_06324160.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus D139] gi|282919927|ref|ZP_06327656.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A9765] gi|282928672|ref|ZP_06336269.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A10102] gi|284024074|ref|ZP_06378472.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 132] gi|294848140|ref|ZP_06788887.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A9754] gi|295405954|ref|ZP_06815763.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8819] gi|296275636|ref|ZP_06858143.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MR1] gi|297208212|ref|ZP_06924642.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246514|ref|ZP_06930352.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8796] gi|300912289|ref|ZP_07129732.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus TCH70] gi|304381293|ref|ZP_07363946.1| succinate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13700949|dbj|BAB42245.1| succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus aureus subsp. aureus N315] gi|21204199|dbj|BAB94897.1| succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus aureus subsp. aureus MW2] gi|46395340|dbj|BAB57311.2| iron-sulphur subunit of succinate dehydrogenase [Staphylococcus aureus subsp. aureus Mu50] gi|49244430|emb|CAG42858.1| putative succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284445|gb|AAW36539.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus COL] gi|82656287|emb|CAI80701.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus RF122] gi|87127483|gb|ABD21997.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202409|gb|ABD30219.1| iron-sulphur subunit of succinate dehydrogenase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740710|gb|ABQ49008.1| succinate dehydrogenase subunit B [Staphylococcus aureus subsp. aureus JH9] gi|149946148|gb|ABR52084.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Staphylococcus aureus subsp. aureus JH1] gi|150374074|dbj|BAF67334.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721606|dbj|BAF78023.1| iron-sulphur subunit of succinate dehydrogenase [Staphylococcus aureus subsp. aureus Mu3] gi|160368133|gb|ABX29104.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724492|gb|EES93221.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728413|gb|EES97142.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus TCH130] gi|257789093|gb|EEV27433.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9781] gi|257841326|gb|EEV65771.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9763] gi|257842071|gb|EEV66499.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9719] gi|257849358|gb|EEV73335.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A9299] gi|257851498|gb|EEV75437.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A8115] gi|257855139|gb|EEV78080.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A6300] gi|257856726|gb|EEV79629.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A6224] gi|257860454|gb|EEV83281.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus A5948] gi|257862785|gb|EEV85550.1| succinate dehydrogenase subunit B [Staphylococcus aureus A5937] gi|259163186|gb|EEW47746.1| succinate dehydrogenase [Staphylococcus aureus D30] gi|262075052|gb|ACY11025.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ED98] gi|269940643|emb|CBI49022.1| putative succinate dehydrogenase iron-sulfurprotein [Staphylococcus aureus subsp. aureus TW20] gi|282319838|gb|EFB50186.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus D139] gi|282589711|gb|EFB94797.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A10102] gi|282594643|gb|EFB99627.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A9765] gi|282763663|gb|EFC03792.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8117] gi|283470359|emb|CAQ49570.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ST398] gi|285816829|gb|ADC37316.1| Succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus 04-02981] gi|294824940|gb|EFG41362.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A9754] gi|294969389|gb|EFG45409.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8819] gi|296886951|gb|EFH25854.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176620|gb|EFH35883.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus A8796] gi|300886535|gb|EFK81737.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus TCH70] gi|302332757|gb|ADL22950.1| putative succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302750972|gb|ADL65149.1| putative succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340276|gb|EFM06217.1| succinate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829542|emb|CBX34384.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128548|gb|EFT84553.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus CGS03] gi|315196874|gb|EFU27217.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320141036|gb|EFW32883.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320143093|gb|EFW34883.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|329313817|gb|AEB88230.1| Succinate dehydrogenase subunit B [Staphylococcus aureus subsp. aureus T0131] gi|329725171|gb|EGG61660.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 21172] gi|329728753|gb|EGG65174.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 21193] gi|329730797|gb|EGG67176.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 21189] Length = 271 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK + Sbjct: 14 TQSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTT 72 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 73 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 133 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 191 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 192 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 251 Query: 251 KMM 253 Sbjct: 252 NRE 254 >gi|32959778|emb|CAD98109.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959780|emb|CAD98110.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959782|emb|CAD98111.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959784|emb|CAD98112.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959786|emb|CAD98113.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959788|emb|CAD98114.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959790|emb|CAD98115.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959792|emb|CAD98116.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959794|emb|CAD98117.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959796|emb|CAD98118.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959798|emb|CAD98119.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959800|emb|CAD98120.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959802|emb|CAD98121.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959804|emb|CAD98122.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959806|emb|CAD98123.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959808|emb|CAD98124.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959810|emb|CAD98125.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959812|emb|CAD98126.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959814|emb|CAD98127.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959816|emb|CAD98128.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959818|emb|CAD98129.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959820|emb|CAD98130.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959822|emb|CAD98131.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959824|emb|CAD98132.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959826|emb|CAD98133.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959828|emb|CAD98134.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959830|emb|CAD98135.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959832|emb|CAD98136.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959834|emb|CAD98137.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959836|emb|CAD98138.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959838|emb|CAD98139.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] gi|32959840|emb|CAD98140.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus] Length = 263 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK + Sbjct: 6 TQSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTT 64 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 65 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 124 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 125 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 183 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 184 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 243 Query: 251 KMM 253 Sbjct: 244 NRE 246 >gi|258654152|ref|YP_003203308.1| fumarate reductase iron-sulfur subunit [Nakamurella multipartita DSM 44233] gi|258557377|gb|ACV80319.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nakamurella multipartita DSM 44233] Length = 252 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +R++R + + Y V+++ G +VLD + ++ L +R +C+ G Sbjct: 2 GRDAHFRVWRGDAAGGD---LQDYTVEVN-EGEVVLDIIHRLQATQAGDLAVRWNCKAGK 57 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC I+G L C+ M I V P+ VI+DLV D+S Y + R I + Sbjct: 58 CGSCSAEINGRPRLLCMTRMSIFDPDETITVTPMRAFPVIRDLVTDVSFNYRKARQIPAF 117 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 E D ++ +C+ C C C + N + GP L++A Sbjct: 118 APPPD-LAPGEYRMQQVDVERSQEFRKCIECFLCQNVCHVVRDHEENKPAFAGPRFLIRA 176 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDR 257 + D R + + + C+ CT+ CP+ + AI +K ++DR Sbjct: 177 AELDMHPLDARTDRR-EFAREHQGIGLCNITKCCTEVCPEHIKITDNAIIPMKERVVDR 234 >gi|54027577|ref|YP_121819.1| fumarate reductase iron-sulfur subunit [Nocardia farcinica IFM 10152] gi|54019085|dbj|BAD60455.1| putative succinate dehydrogenase iron-sulfur subunit [Nocardia farcinica IFM 10152] Length = 248 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R + + G + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 KFRVWRGD-ETGGA--LQDFTVEVN-EGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++G L C+ M + V P+ V++DLV D+S Y + R I + Sbjct: 62 SAEVNGRPRLLCMTRMSTFTRDELVTVTPMRTFPVVRDLVTDVSFNYEKAREIPSFTPP- 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 + D ++ +C+ C C +C + N + GP L++ Sbjct: 121 PELKPGDYRMKQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKQAFAGPRFLMRIAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R +D L C+ CT+ CP+ + A+ +K + DRK Sbjct: 181 MHPLDVA--DRRQLAQDDQGLGYCNITKCCTEVCPENIKITDNALIPLKERVADRK 234 >gi|330443978|ref|YP_004376964.1| succinate dehydrogenase [Chlamydophila pecorum E58] gi|328807088|gb|AEB41261.1| succinate dehydrogenase [Chlamydophila pecorum E58] Length = 259 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 17/242 (7%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTL 76 KN +IYR GN +++ + L + G V+ L+ I+ ++ + Sbjct: 3 PKNTFILKIYRG---MPGNQYWESFELPL-HPGENVISALMEIEKRPINTQGEVVDPVVW 58 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSH 131 + C E +CGSC M ++G AC +K+ I + PL +++DL+VD S Sbjct: 59 EQGCLEEVCGSCAMLVNGVPRQACTALIKEYIDTTQSREITLAPLTKFPLVRDLIVDRSV 118 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + I+ W+ + E ++ + L C+ C CC+ +CP ++D ++ Sbjct: 119 MFENLQEIQGWVAADVDGETFGPKVTPEQQELLYTLSMCMTCGCCAEACPQVNAHND-FI 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 GPA + Q + D+ ERL L + C NC + CPK L ++I+ + Sbjct: 178 GPAAISQVRYFNSYPGDKRSEERLRRLMGKDGIRGCGQAYNCVRVCPKKLPLTESISIMG 237 Query: 252 MM 253 Sbjct: 238 RE 239 >gi|296167529|ref|ZP_06849881.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897151|gb|EFG76760.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 248 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 13/234 (5%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 R++R + N + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 RVWRGD---DANGALQDFTVEVN-EGEVVLDIIHRLQQTQTPDLAVRWNCKAGKCGSCSA 63 Query: 91 NIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 64 EINGVPRLLCMTRMSTFAEDEVVTVTPLRTFPVIRDLVTDVSFNYEKAREIPAFAPPKD- 122 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLID 205 E + D Q+ +C+ C C C + N + GP L++ + Sbjct: 123 LQPGEYRMAQVDVQRSQEFRKCIECFLCQNVCHVVRDHEENKKAFAGPRFLMRIAELEMH 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R + ++ L C+ CT+ CP+ + A+ +K + DRK Sbjct: 183 PLDTM--DRRNQAQEAHGLGYCNITKCCTEVCPENIKITDNALIPMKERVADRK 234 >gi|324997710|ref|ZP_08118822.1| fumarate reductase iron-sulfur subunit [Pseudonocardia sp. P1] Length = 258 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 +L+ +R++R + + Y V+++ G +VLD + ++ L +R +C+ G Sbjct: 8 THLQHFRVWRGD---DTKGELVDYPVEVN-EGEVVLDVIHRLQATEAGDLAVRWNCKAGK 63 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 CGSC I+G L C+ M + V PL VI+DLV D+S Y++ R I + Sbjct: 64 CGSCSAEINGRPRLLCMTRMNTFDENEVVTVTPLRTFPVIRDLVTDVSFNYTKAREIPSF 123 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 + +P E D ++ +C+ C C +C + N + + GP L++ Sbjct: 124 VPPEGVEPG-EYRMQQVDVERSQEFRKCIECYLCQNTCHVVRDHEENKEAFAGPRYLMRT 182 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D G R ++ L C+ CT+ CP+ + A+ +K +DRK Sbjct: 183 AELDMHPLD-AHGNRAVEAQEEHGLGFCNITKCCTEVCPEHIKITDNALIPMKERAVDRK 241 >gi|49483312|ref|YP_040536.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|257427863|ref|ZP_05604261.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257430498|ref|ZP_05606880.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257433260|ref|ZP_05609618.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus E1410] gi|257436099|ref|ZP_05612146.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus M876] gi|282903698|ref|ZP_06311586.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus C160] gi|282905466|ref|ZP_06313321.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908440|ref|ZP_06316271.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910724|ref|ZP_06318527.1| succinate dehydrogenase, iron-sulfur subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282913924|ref|ZP_06321711.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus M899] gi|282918847|ref|ZP_06326582.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus C427] gi|282923969|ref|ZP_06331645.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus C101] gi|283957892|ref|ZP_06375343.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293500959|ref|ZP_06666810.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus 58-424] gi|293509916|ref|ZP_06668625.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus M809] gi|293526503|ref|ZP_06671188.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus M1015] gi|295427636|ref|ZP_06820268.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591409|ref|ZP_06950047.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MN8] gi|49241441|emb|CAG40125.1| putative succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257274704|gb|EEV06191.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257278626|gb|EEV09245.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257281353|gb|EEV11490.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus E1410] gi|257284381|gb|EEV14501.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus M876] gi|282313941|gb|EFB44333.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus C101] gi|282316657|gb|EFB47031.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus C427] gi|282321992|gb|EFB52316.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus M899] gi|282325329|gb|EFB55638.1| succinate dehydrogenase, iron-sulfur subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282328105|gb|EFB58387.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330758|gb|EFB60272.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595316|gb|EFC00280.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus C160] gi|283790041|gb|EFC28858.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920575|gb|EFD97638.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus aureus subsp. aureus M1015] gi|291095964|gb|EFE26225.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus 58-424] gi|291467366|gb|EFF09883.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus M809] gi|295127994|gb|EFG57628.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576295|gb|EFH95011.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus MN8] gi|312438475|gb|ADQ77546.1| succinate dehydrogenase [Staphylococcus aureus subsp. aureus TCH60] gi|315193820|gb|EFU24215.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus aureus subsp. aureus CGS00] Length = 271 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 10/242 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPT 73 ++ + I R + + P +T+ + + C + + IK + Sbjct: 15 QSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTTP 73 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + Sbjct: 74 VVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRMF 133 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C CP+ +++++G Sbjct: 134 DNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFVG 192 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 193 AQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMN 252 Query: 252 MM 253 Sbjct: 253 RE 254 >gi|239636355|ref|ZP_04677357.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus warneri L37603] gi|239597710|gb|EEQ80205.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus warneri L37603] Length = 278 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 12/242 (4%) Query: 22 TGEKNLKEYR--IYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPT 73 + K + I R + D++ P +T+ V + C + + K + Sbjct: 22 NNQPKQKTVKLIIKRQD-DSESKPYEETFEVPYKENLNVIACLMEIRRNPVNSKGEKTTP 80 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 +T +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + Sbjct: 81 VTWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRSRMF 140 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C CP+ + ++G Sbjct: 141 DNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TQKNDFVG 199 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + Q + + ERLD L L +C NC +CPKG+ +IA + Sbjct: 200 AQAISQVRLFDLHPTGAMTKDERLDALMGAGGLQQCGNSQNCVNACPKGIPLTTSIAAMN 259 Query: 252 MM 253 Sbjct: 260 RE 261 >gi|308070597|ref|YP_003872202.1| succinate dehydrogenase iron-sulfur protein [Paenibacillus polymyxa E681] gi|305859876|gb|ADM71664.1| Succinate dehydrogenase iron-sulfur protein [Paenibacillus polymyxa E681] Length = 255 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 12/243 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDP 72 ++ + R D K +P + + + G V+ L+ I+ Sbjct: 4 QAVKSNKTVKFVVTRQ-ADPKASPYTEEFEL-AYRPGMNVISALMEIQRNPVDSHGKETA 61 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV+D S Sbjct: 62 PVCWESNCLEEVCGACSMVINGKPRQACAALVDKLEQPITIAPMSTFPVVRDLVIDRSRM 121 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + ++ W+ + E RQ L +C+ C C +CP+ + ++ Sbjct: 122 FNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNEKT-TFI 180 Query: 192 GPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 GPA + Q + E Q ERL+ L L C NC +SCPKG+ +IA++ Sbjct: 181 GPAAISQVRLFNSHPTGEMNQEERLEALMTDDGLEGCGNSQNCVRSCPKGIPLTTSIAEM 240 Query: 251 KMM 253 Sbjct: 241 NKE 243 >gi|311104348|ref|YP_003977201.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Achromobacter xylosoxidans A8] gi|310759037|gb|ADP14486.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Achromobacter xylosoxidans A8] Length = 244 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 10/241 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + + RI R + TY V VLD + ++ +P L+ R Sbjct: 3 TKNSTNQRQLTVRISRGT----EDGSYSTYSVPW-RENQTVLDVVTEVQRTQEPNLSYRY 57 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CR G+CGSC M ++G C + ++ I + PL +M IKDLVVDMS F+ + Sbjct: 58 ACRVGVCGSCAMTVNGKPRWTCRTHVSRVEEGGVIVIEPLRNMPRIKDLVVDMSEFFQKW 117 Query: 137 RSIEPWLKTVSPKPAKELL--QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + L + R++ D EC+ C C +C W+ D YLGPA Sbjct: 118 ARAGNTFVGTATRNDPPALVSPQSKKRKQADAAIECINCGVCYAACDVVSWDKD-YLGPA 176 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +A+ D R + L CHT +C + CP L+P +IA +K Sbjct: 177 ALNRAWTLFNDERHADPKDVLRKATSGSGCNSCHTQGSCMKHCPVSLSPTGSIAGLKRSA 236 Query: 255 L 255 + Sbjct: 237 I 237 >gi|295399432|ref|ZP_06809414.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus thermoglucosidasius C56-YS93] gi|312110009|ref|YP_003988325.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. Y4.1MC1] gi|294978898|gb|EFG54494.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus thermoglucosidasius C56-YS93] gi|311215110|gb|ADP73714.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. Y4.1MC1] Length = 253 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 10/240 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 EK + I R + P + + + + + K + + Sbjct: 2 SEKKTVRFIITRQDR-PDSAPYEEEFEIPYRPNMNVISALMEIRRNPVNAKGQKTTPVVW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ V++DL VD S + Sbjct: 61 EMNCLEEVCGACSMVINGKPRQACTALIDKLEQPIRLEPMRTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 121 KKVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSN-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Q + + ER+ + L C NC Q+CPKG+ +IA + Sbjct: 180 LSQVRLFNTHPTGAMHKAERMKAIMGDGGLANCGNSQNCVQACPKGIPLTTSIAALNREA 239 >gi|16079895|ref|NP_390721.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221310784|ref|ZP_03592631.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221315109|ref|ZP_03596914.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320027|ref|ZP_03601321.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. JH642] gi|221324310|ref|ZP_03605604.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. SMY] gi|321312376|ref|YP_004204663.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis BSn5] gi|118613|sp|P08066|DHSB_BACSU RecName: Full=Succinate dehydrogenase iron-sulfur subunit gi|143527|gb|AAA22747.1| iron-sulfur protein [Bacillus subtilis] gi|1770053|emb|CAA99548.1| iron-sulphur subunit of succinate dehydrogenase subunit [Bacillus subtilis] gi|2635308|emb|CAB14803.1| succinate dehydrogenase (iron-sulfur protein) [Bacillus subtilis subsp. subtilis str. 168] gi|291485274|dbj|BAI86349.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. natto BEST195] gi|320018650|gb|ADV93636.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis BSn5] Length = 253 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTL 76 E+ + I R + P + + + + + + + +K + +T Sbjct: 2 SEQKTIRFIITRQD-TADSTPYDEEFEIPYRPNLNVISALMEIRRNPVNVKGEKTTPVTW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 61 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + +++GPA Sbjct: 121 KKVKAWIPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVN-SKSKFMGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + ERL+ L D L C NC QSCPKG+ +IA + Sbjct: 180 MSQVRLFNAHPTGAMNKSERLEALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|169631498|ref|YP_001705147.1| fumarate reductase iron-sulfur subunit [Mycobacterium abscessus ATCC 19977] gi|169243465|emb|CAM64493.1| Putative succinate dehydrogenase, iron-sulfur subunit [Mycobacterium abscessus] Length = 248 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + + + V + + G +VLD + I+ L +R +C+ G CGSC Sbjct: 7 LRVWRGD---DDGGELIDFTVPV-SEGEVVLDIIHRIQATQASDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V PL VI+DLV D+S Y + R ++ + Sbjct: 63 AEINGRPRLMCMTRMSTFDESETITVTPLRAFPVIRDLVTDVSFNYQKAREVQSFTPPKG 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 KP + ED ++ +C+ C C +C + + N + GP L++ + Sbjct: 123 LKPG-DYRMQQEDVERSQEFRKCIECFLCQNTCHAVRDHEENKKAFAGPRYLMRVAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R + ++ L C+ CT+ CP+G++ A+ +K + DRK Sbjct: 182 HPLDVA--DRREVAQEELGLGYCNITKCCTEVCPEGIHITDNALIPMKERVADRK 234 >gi|269125370|ref|YP_003298740.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermomonospora curvata DSM 43183] gi|268310328|gb|ACY96702.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermomonospora curvata DSM 43183] Length = 256 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 14/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R + G + Y V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 KFRVWRGD---AGEGELVDYTVEVN-EGEVVLDVIHRLQATQAPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M I V P+ VI+DLV D+S Y + R I + Sbjct: 62 SAEINGMPRLMCMTRMSTFSQDETITVTPIRTFPVIRDLVTDVSFNYEKARQIPAFNPGD 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 + L ED Q+ +C+ C C+ C + N + GP L++ Sbjct: 122 AKPGE--LRMMQEDVQRSQEFRKCIECFLCNNVCHVIRDHEENKPAFAGPRFLMRIAELE 179 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D Q +R ++ L C+ CT+ CP+ + A+ +K ++ R+ Sbjct: 180 MHPAD--QSDRRHIAQEDHGLGFCNITKCCTEVCPEHIKITDNALIPLKERVVGRR 233 >gi|296331609|ref|ZP_06874078.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675432|ref|YP_003867104.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296151204|gb|EFG92084.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413676|gb|ADM38795.1| succinate dehydrogenase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii str. W23] Length = 253 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTL 76 E+ + I R + P + + V + + + + +K + +T Sbjct: 2 SEQKTIRFIITRQD-TADSTPYDEEFEVPYRPNLNVISALMEIRRNPVNVKGEKTTPVTW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 61 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + +++GPA Sbjct: 121 KKVKAWIPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVN-SKSKFMGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + +RL+ L D L C NC QSCPKG+ +IA + Sbjct: 180 MSQVRLFNAHPTGAMNKSDRLEALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|256389958|ref|YP_003111522.1| fumarate reductase iron-sulfur subunit [Catenulispora acidiphila DSM 44928] gi|256356184|gb|ACU69681.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Catenulispora acidiphila DSM 44928] Length = 254 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 12/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +++++R + + + V+++ G +VLD + ++ P + R +C+ G CGSC Sbjct: 6 KFKVWRGDASGGD---LKDFEVEIN-EGEVVLDIIHRLQATQAPDMACRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + I V PL VIKDLV D+ Y++ R ++ + Sbjct: 62 SAEINGKPRLMCMTRMSTFEQDETITVTPLRTFPVIKDLVTDVGFNYTKAREVKSFTPPA 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 KP E D ++ +C+ C C +C + + N + + GP L++ Sbjct: 122 DLKPG-EYRMQQIDVERSQEFRKCIECFLCQNTCHAVRDHEENKESFSGPRYLMRVAELD 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R + ++ L C+ CT+ CP+ ++ A+ +K ++D+K Sbjct: 181 MHPLDTA-ADRKKSAQEEHGLGFCNITKCCTEVCPEHIHITDNALIPLKERVVDKK 235 >gi|298694437|gb|ADI97659.1| succinate dehydrogenase iron-sulfur protein [Staphylococcus aureus subsp. aureus ED133] Length = 271 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 10/243 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDP 72 ++ + I R + + P +T+ + + C + + IK K Sbjct: 14 TQSKPKQKTVKLIIKRQD-TSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGKKTT 72 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 73 PVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRM 132 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + ++ W+ + E RQ L +C+ C C CP+ +++++ Sbjct: 133 FDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFV 191 Query: 192 GPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 G + Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 192 GAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAM 251 Query: 251 KMM 253 Sbjct: 252 NRE 254 >gi|224476256|ref|YP_002633862.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus carnosus subsp. carnosus TM300] gi|222420863|emb|CAL27677.1| succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus carnosus subsp. carnosus TM300] Length = 274 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 10/242 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPT 73 + ++ I R + + P + + + + C + + K + Sbjct: 18 QASNKQKTVTLIIKRQD-TSDSQPYEEKFEIPYRENLNVIACLMEIRRNPINTKGEKVAP 76 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 +T +C E +CG+C M I+G AC + ++ I + P+ +I+DL VD S + Sbjct: 77 VTWDMNCLEEVCGACSMVINGHARQACSAIVDQLEQPIRLEPMSTFPIIRDLQVDRSRMF 136 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C CP+ ++ ++G Sbjct: 137 DNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TKNNGFVG 195 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + Q + + ERLD L L C NC +CPKG+ +IA + Sbjct: 196 AQAISQVRLFNLHPTGSMTKDERLDALMGAGGLQECGNSQNCVNACPKGIPLTTSIAALN 255 Query: 252 MM 253 Sbjct: 256 RE 257 >gi|251798775|ref|YP_003013506.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus sp. JDR-2] gi|247546401|gb|ACT03420.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus sp. JDR-2] Length = 252 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 12/243 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID-------P 72 A T ++ I R + P + + + V+ GL+ I+ Sbjct: 2 AQTTATKTVKFVITRQD-GPDSAPYTEEFEIPY-RANMNVISGLMEIQRNPKKSDGGNTA 59 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV++ Sbjct: 60 PVCWESNCLEEVCGACSMVINGKPRQACSALIDKLEQPIRLEPMRTFPVVRDLVINRERM 119 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + ++ W+ + E+ RQ L +C+ C C +CP+ + + ++ Sbjct: 120 FNALKRVKAWIPIDGTYDLGPGPRLAEEKRQWAYELSKCMTCGVCMEACPNVN-DRNSFI 178 Query: 192 GPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 GP + Q + + E + ERL+ L + + C NC +SCPKG+ +IA I Sbjct: 179 GPQAISQVRLFNVHPTGEMNKAERLETLMEDGGIEGCGNSQNCVRSCPKGIPLTTSIAAI 238 Query: 251 KMM 253 Sbjct: 239 NRD 241 >gi|327439320|dbj|BAK15685.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Solibacillus silvestris StLB046] Length = 258 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 + I R + + G ++ + V G V+ L++I+ + ++ Sbjct: 5 NTGRTVKLEIVRQD-NENGATRVEKFEVPY-RPGMNVISALMHIQKYPVTADGQKTTPVS 62 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + + I + P+ VI+DL VD ++ Sbjct: 63 WDMNCLEEVCGACSMVINGRPQQSCSALVDKLTQPIRLEPMKTFPVIRDLQVDRERMFNA 122 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ E + E RQ L +C+ C C +CP+ ++ ++GP Sbjct: 123 LKKVKAWVPIDGTYDLGEGPRMPERKRQWAYELSKCMTCGVCMEACPNVSESAS-FIGPF 181 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL+ + L C NC +CPKG+ +IA + Sbjct: 182 ALSQVRLFNTHPTGAMNKDERLNAIMGDGGLANCGNSQNCVAACPKGIPLTTSIAALNRE 241 >gi|239820291|ref|YP_002947476.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus S110] gi|239805144|gb|ACS22210.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Variovorax paradoxus S110] Length = 244 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 10/241 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 ++ RI R D + TY V VLD + ++ +P L+ R Sbjct: 3 TDKPTKQRQLTVRISRGTGDGS----LSTYSVPW-RENQTVLDVVTEVQRTQEPDLSYRF 57 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQH 136 +CR G+CGSC M ++G C + ++ I + PL +M IKDLVVDM F+ + Sbjct: 58 ACRVGVCGSCAMTVNGKPRWTCRTHVSRVEEGGVIVIEPLRNMPRIKDLVVDMREFFQKW 117 Query: 137 RSIEPWLKTVSPKPAKELL--QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + + R+ D EC+ C C +C W+ D YLGPA Sbjct: 118 KKAGSTFVGTATRNDPPARVSPQSKKRRLADAAIECINCGVCYAACDVVTWDKD-YLGPA 176 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +A+ D R + L CHT +C + CP L+P +IA +K Sbjct: 177 ALNRAWTLYNDERHADPKDVLHKATSGGGCNSCHTQGSCMKHCPVSLSPTGSIAGLKRSA 236 Query: 255 L 255 L Sbjct: 237 L 237 >gi|212716955|ref|ZP_03325083.1| hypothetical protein BIFCAT_01901 [Bifidobacterium catenulatum DSM 16992] gi|212660240|gb|EEB20815.1| hypothetical protein BIFCAT_01901 [Bifidobacterium catenulatum DSM 16992] Length = 312 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 45/253 (17%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + VLD LL IK +DPTL R SC G+CGS ++I+GT TL C Sbjct: 55 GKQWVQDYTLHV-RPEDTVLDCLLKIKRTVDPTLAFRYSCGHGMCGSDAVSINGTPTLLC 113 Query: 101 VKDMKDIKGA-----------------------------------IAVYPLPHMSVIKDL 125 +KD I + PLP V +DL Sbjct: 114 TASIKDWAKQPNTVLVDNEGFRHTGDADASLADDAVSVSSGDLGVIELAPLPGFPVQRDL 173 Query: 126 VVDMSHFYSQHRSIEPWLK--------TVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + D+ Q R ++P+L+ A E LQ+ + K + L C+ C C Sbjct: 174 IADIDQMLDQIRKLKPYLQANNELATTKDGKINAFEYLQNPQQLAKYELLTNCIACGTCE 233 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 SCP Y + ++GPA L+ A R++ DSRD R+D ++ + C ++ CT+ C Sbjct: 234 GSCPVY-AGGEAFIGPAALITASRFINDSRDGQANARMDAIDSADGIAACQSVRACTREC 292 Query: 238 PKGLNPAKAIAKI 250 P+G++ + I ++ Sbjct: 293 PRGIDVGEEIWQL 305 >gi|239827941|ref|YP_002950565.1| succinate dehydrogenase iron-sulfur subunit [Geobacillus sp. WCH70] gi|239808234|gb|ACS25299.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. WCH70] Length = 253 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 10/240 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 EK + I R + P + + + + + K + + Sbjct: 2 SEKKTVRFIITRQDR-PDSAPYEEEFEIPYRPNMNVISALMEIRRNPVNAKGQKTTPVVW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ V++DL VD S + Sbjct: 61 EMNCLEEVCGACSMVINGKPRQACTALIDKLEQPIRLEPMRTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 121 KKVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSN-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Q + + ER+ + L C NC QSCPKG+ +IA + Sbjct: 180 LSQVRLFNAHPTGAMHKAERMKAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNREA 239 >gi|325674442|ref|ZP_08154130.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|325554702|gb|EGD24376.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 251 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++RI+R + G + Y V+++ G +VLD + I+ L +R +C+ G CGSC Sbjct: 6 KFRIWRGDASGGG---LQDYAVEVN-EGEVVLDIIHRIQATQAADLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V P+ VI+DLV D+S Y++ R I + Sbjct: 62 SAEINGRPRLMCMTRMSTFAEDEVVTVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPPP 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS---DRYLGPAILLQAYRWL 203 E D Q+ +C+ C C +C + D + GP L++ Sbjct: 122 G-LAPGEYRMKQVDVQRSQEFRKCIECFLCQNTCHVVRDHDENKDAFAGPRYLMRVAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R +D F L C+ CT CP+ ++ A+ +K + DR+ Sbjct: 181 MHPLDVA--DRRGAAQDDFGLGLCNITKCCTDVCPEDIHITDNALIPMKERVADRR 234 >gi|320162160|ref|YP_004175385.1| succinate dehydrogenase iron-sulfur subunit [Anaerolinea thermophila UNI-1] gi|319996014|dbj|BAJ64785.1| succinate dehydrogenase iron-sulfur subunit [Anaerolinea thermophila UNI-1] Length = 249 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 21/250 (8%) Query: 22 TGEKNLKEYRIYRWNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + EK + +YR P DT+ +++ + VLD + I D +L +C Sbjct: 2 SDEKWTVTFTVYR---KKDEQPARYDTFTLEV-SPDEYVLDAVERIWAFHDRSLVFAHAC 57 Query: 81 REGICGSCGMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 CG+CGM ++G L C+ ++ G + V PL + V+ DL VDMS Y Sbjct: 58 HHSTCGACGMRVNGVERLTCITPIREVTRNGGTVRVEPLRNFPVVSDLAVDMSRLYRAMD 117 Query: 138 SIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 +++ + ED + L +C+ C C ++CP + Sbjct: 118 AVQAPAVHPLDAAPLEGGGIRPPREVPQPEDEGEFYRLADCIECGLCVSACPVAGTDP-T 176 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 YLGPA L A + + L ++ ++RCH+ CT CP + P I Sbjct: 177 YLGPAALAGAQLQGV----AQNPDLLGVVDCAEGVWRCHSAYECTAVCPSNVQPGWRIMD 232 Query: 250 IKMMLLDRKI 259 ++ ++ ++I Sbjct: 233 LRRQVVAQRI 242 >gi|310643781|ref|YP_003948539.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus polymyxa SC2] gi|309248731|gb|ADO58298.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein [Paenibacillus polymyxa SC2] Length = 255 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 12/243 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDP 72 ++ + R + + + + + + G V+ L+ I+ Sbjct: 4 QAVKSNKTVKFVVTRQD-EPNASSYTEEFEL-AYRPGMNVISALMEIQRNPVDSQGKETA 61 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF 132 + +C E +CG+C M I+G AC + ++ I + P+ V++DLV+D S Sbjct: 62 PVCWESNCLEEVCGACSMVINGKPRQACAALVDKLEQPITIAPMSTFPVVRDLVIDRSRM 121 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + ++ W+ + E RQ L +C+ C C +CP+ + ++ Sbjct: 122 FNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNEKT-TFI 180 Query: 192 GPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 GPA + Q + E Q ERLD L L C NC +SCPKG+ +IA++ Sbjct: 181 GPAAISQVRLFNSHPTGEMNQEERLDALMTDDGLEGCGNSQNCVRSCPKGIPLTTSIAEM 240 Query: 251 KMM 253 Sbjct: 241 NKQ 243 >gi|328884799|emb|CCA58038.1| Succinate dehydrogenase iron-sulfur protein [Streptomyces venezuelae ATCC 10712] Length = 257 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + D + Y V++ + G +VLD + ++ P L +R +C+ G CGSC Sbjct: 8 FRVWRGDTDGGA---LTDYTVEVHD-GEVVLDVVHRLQATQAPDLAVRWNCKAGKCGSCS 63 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M I V P+ V++DLV D+S Y++ R + ++ Sbjct: 64 AEINGRPRLLCMTRMSVFARDEVITVTPMRAFPVVRDLVTDVSFNYAKAREVPAFVPPAG 123 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 P E ED ++ +C+ C C +C + N + GP L++ + Sbjct: 124 VAPG-EYRMRREDVERSQEFRKCIECFLCQDTCHVVRDHEENKAAFAGPRFLMRVAELDM 182 Query: 205 DSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D + +R + ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 183 HPLDAAEEAGIDRRRSAQEEHGLGYCNITKCCTEVCPESIRITDNALIPLKERVVDRK 240 >gi|56964427|ref|YP_176158.1| succinate dehydrogenase iron-sulfur subunit [Bacillus clausii KSM-K16] gi|56910670|dbj|BAD65197.1| succinate dehydrogenase iron-sulfur protein [Bacillus clausii KSM-K16] Length = 250 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWN-PDNKG------NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 + + R + PD+ P V +C + + +K + +T Sbjct: 2 SEKTIRLIVTRQDGPDSGSYEEEFAIPYRQNLNV--ISCLMEIRRNPVNVKGEKTTPVTW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DLVVD S + Sbjct: 60 DMNCLEEVCGACSMVINGKPQQSCTALVDKLEQPIRLEPMRTFPVVRDLVVDRSRMFDSL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ + ++GPA Sbjct: 120 KKVKAWIPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLESCPNVN-SKSEFIGPAA 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + E + ERL + L C NC Q+CPKG+ +IA + Sbjct: 179 LSQVRLFNAHPTGEMNKEERLATIMTDGGLANCGNSQNCVQACPKGIPLTTSIAALNRA 237 >gi|154149634|ref|YP_001403252.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Candidatus Methanoregula boonei 6A8] gi|153998186|gb|ABS54609.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanoregula boonei 6A8] Length = 489 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 19/236 (8%) Query: 27 LKEYR--IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 ++E R I R++P P +TY V++ + G VL L I ++IDPTL+ R C G Sbjct: 1 MRELRVTILRFDPKKDPAPHAETYAVNV-SEGARVLHVLHAIHDEIDPTLSYRYCCGSGQ 59 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CGSC + ++G LAC+K+ I + PL ++ V KDLVVD+ I Sbjct: 60 CGSCAVRVNGEPVLACMKEA---TDGITIAPL-NLPVKKDLVVDL------LPKIAAIAS 109 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 V A L + +I L +C+ C C + CP+ +LGP + Q R + Sbjct: 110 LVPSGEADARLPTKAQIDEIKPLRDCIECLACVSVCPAMTVT--EFLGPTAMRQEMRLAL 167 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 D RD D + D L+ C + C +CPK + PAKAI K++ + + + Sbjct: 168 DPRDTGT-RVPDAVRD--GLFTCTSCQACYLACPKKIKIPAKAIEKLRALANRQGL 220 >gi|311064590|ref|YP_003971315.1| succinate dehydrogenase iron-sulfur protein SdhB [Bifidobacterium bifidum PRL2010] gi|310866909|gb|ADP36278.1| SdhB Succinate dehydrogenase iron-sulfur protein [Bifidobacterium bifidum PRL2010] Length = 323 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 61/272 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 54 GKQWVQEYTLPVRRED-TVLDCLLKIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 112 Query: 101 VKDMKDIKGA-----------------------------------------------IAV 113 + D I + Sbjct: 113 TATVGDWAKPATPIPFADGEGFRRTGDAGDKRSADTTTPEGNSCEDNAGAQSHELGIIEL 172 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKID 165 PLP V +DL+ D+ Q R ++P+L+ E LQ E K + Sbjct: 173 APLPGFPVQRDLIADIDPMLDQIRKLKPYLQADGVLATTSEGKVDVFEYLQRPEQLTKYE 232 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ERLD ++ + Sbjct: 233 LLSNCIACGVCEGACPVY-AGGDAFIGPAALISASRFVNDSRDTATDERLDAIDTADGVA 291 Query: 226 RCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +A+++ Sbjct: 292 ACQSVRACSRHCPRGIDVGEEMWQIVARVRER 323 >gi|170065615|ref|XP_001868013.1| succinate dehydrogenase [Culex quinquefasciatus] gi|167862555|gb|EDS25938.1| succinate dehydrogenase [Culex quinquefasciatus] Length = 303 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 91/233 (39%), Positives = 127/233 (54%), Gaps = 23/233 (9%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR------------------RSCREGICG 86 M Y + ++ + I D R ++CR+ + Sbjct: 52 MLVYPCLMMEPAYSLVQDRMTIYGTCDYEKMFRLELTRSEGRWNATAQLSTKNCRKELVE 111 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH-----MSVIKDLVVDMSHFYSQHRSIEP 141 + G N K ++ V+ L H + ++++ + + + R Sbjct: 112 DFVLEWHGRNYTVFANSWNVEKSSLTVHLLVHKRGMSHAQVREIYPVLDIAFGKVRDENC 171 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 +T K + LQS +DR K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYR Sbjct: 172 RNETGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 231 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 W+IDSRDE RLD L+DPF +YRCHTIMNCT++CPKGLNP KAIA+IK +L Sbjct: 232 WIIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLL 284 >gi|70726813|ref|YP_253727.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus haemolyticus JCSC1435] gi|68447537|dbj|BAE05121.1| succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus haemolyticus JCSC1435] Length = 282 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 10/242 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDN------CGPMVLDGLLYIKNKIDPT 73 ++ + I R + + P +T+ + C + + K + Sbjct: 26 QKEPKQKSIKLIIKRQD-NQDSKPYEETFEIPYKENMNIIACLMEIRRNPVNNKGEKTTP 84 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 +T +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD + + Sbjct: 85 VTWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRTRMF 144 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C CP+ +++++G Sbjct: 145 DNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TQNNKFVG 203 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + Q + + ERLD L L C NC +CPKG+ +IA + Sbjct: 204 AQAISQVRLFDLHPTGAMTKDERLDALMSAGGLQECGNSQNCVNACPKGIPLTTSIAAMN 263 Query: 252 MM 253 Sbjct: 264 RE 265 >gi|298252731|ref|ZP_06976525.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Gardnerella vaginalis 5-1] gi|297533095|gb|EFH71979.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Gardnerella vaginalis 5-1] Length = 361 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 56/272 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + + +LD LL IK IDPTL R SC G+CGS N++G TL C Sbjct: 90 GKHWVQDYSLRVHSTD-TILDCLLTIKRTIDPTLAFRYSCGHGVCGSDAANVNGMPTLLC 148 Query: 101 ----------------------------------------------VKDMKDIKGAIAVY 114 G I + Sbjct: 149 SATIGANARPESTNSVQSRGFRKTGTTSSSSQSTKSPTLQQKSKETTTLQNGTFGVIELA 208 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE--------LLQSHEDRQKIDG 166 PL +V +DL+ D+S SQ + +EP+L+ + LQ E+ +K + Sbjct: 209 PLSGFAVQRDLICDISPMISQIKRLEPYLQASNVSTRNIEGKLQLIEFLQHPEELKKFEL 268 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+MC C CP Y + ++GPA L+ A R++ DSRD RLD ++ + Sbjct: 269 LSNCIMCGACEGICPIY-AGGEAFIGPAALVNAARFIYDSRDNATEHRLDLIDGSDGISA 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++ C++ CP+G++ + I ++ ++ +RK Sbjct: 328 CQSVRACSRQCPRGIDIGEEIWQLTTLVNERK 359 >gi|224283322|ref|ZP_03646644.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium bifidum NCIMB 41171] gi|313140474|ref|ZP_07802667.1| succinate dehydrogenase/fumarate reductase [Bifidobacterium bifidum NCIMB 41171] gi|313132984|gb|EFR50601.1| succinate dehydrogenase/fumarate reductase [Bifidobacterium bifidum NCIMB 41171] Length = 323 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 61/272 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 54 GKQWVQEYTLPVRRED-TVLDCLLKIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 112 Query: 101 VKDMKDIKGA-----------------------------------------------IAV 113 + D I + Sbjct: 113 TATVGDWAKPATPIPLADGEGFRRTGDAGDKRSADTTAPEENSCEDNAGAQSHELGIIEL 172 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKID 165 PLP V +DL+ D+ Q R ++P+L+ E LQ E K + Sbjct: 173 APLPGFPVQRDLIADIDPMLDQIRKLKPYLQADGVLATTSEGKVDVFEYLQRPEQLAKYE 232 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ERLD ++ + Sbjct: 233 LLSNCIACGVCEGACPVY-AGGDAFIGPAALISASRFVNDSRDTATDERLDAIDTADGVA 291 Query: 226 RCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +A+++ Sbjct: 292 ACQSVRACSRHCPRGIDVGEEMWQIVARVRER 323 >gi|310287692|ref|YP_003938950.1| Succinate dehydrogenase iron-sulfur protein [Bifidobacterium bifidum S17] gi|309251628|gb|ADO53376.1| Succinate dehydrogenase iron-sulfur protein [Bifidobacterium bifidum S17] Length = 323 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 61/272 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 54 GKQWVQEYTLPVRRED-TVLDCLLKIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 112 Query: 101 VKDMKDIKGA-----------------------------------------------IAV 113 + D I + Sbjct: 113 TATVGDWAKPATPIPLADDEGFRRTGDAGDKRSADTTAPEGNSCEDNAGAQSHELGIIEL 172 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKID 165 PLP V +DL+ D+ Q R ++P+L+ E LQ E K + Sbjct: 173 APLPGFPVQRDLIADIDPMLDQIRKLKPYLQADGVLATTSEGKVDVFEYLQRPEQLAKYE 232 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ERLD ++ + Sbjct: 233 LLSNCIACGVCEGACPVY-AGGDAFIGPAALISASRFVNDSRDTATDERLDAIDTADGVA 291 Query: 226 RCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +A+++ Sbjct: 292 ACQSVRACSRHCPRGIDVGEEMWQIVARVRER 323 >gi|120437475|ref|YP_863161.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Gramella forsetii KT0803] gi|117579625|emb|CAL68094.1| succinate dehydrogenase iron-sulfur protein [Gramella forsetii KT0803] Length = 247 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 86/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + M TY V + L+ + + ++ D + CREGI Sbjct: 4 TLKIWRQK-NADTKGKMQTYQVSDISTDMSFLEMMDVLNEQLIDKGDEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CGSC + I+G C M+ K + P VIKDLVVD S F Sbjct: 63 CGSCNLQINGEPHGPDRGVTTCQLHMRSFKDGDTIVIEPFRAKAFPVIKDLVVDRSSFDR 122 Query: 135 --QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + E C+ C C +C N+ L Sbjct: 123 IQQAGGYISVNTSGNTQDANSIPVDKESADMSFYAATCIGCGACVAACK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + + L E L + D C C CPKG++ + IA++ Sbjct: 179 TSAKVSQFALLPQGEVEADRRVLQMVEQMDKEGFGNCTNTGACEIECPKGISL-ENIARM 237 Query: 251 KMMLLDRKI 259 L + Sbjct: 238 NREYLKASV 246 >gi|167628504|ref|YP_001679003.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Heliobacterium modesticaldum Ice1] gi|167591244|gb|ABZ82992.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Heliobacterium modesticaldum Ice1] Length = 248 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 10/240 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN------KIDPTLTLRRS 79 R+ R + G P + + + ++ KN + + + Sbjct: 3 ETIRLRVKRQD-GPNGTPRWEEFAIPYRKNLNVIAMLQDIQKNPVLANGQKTTPVVFECN 61 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 C E +CG+C M ++G AC + + I + PL +I+DL VD + + + + Sbjct: 62 CLEEVCGACSMIVNGKPRQACSALVDQLSQPITLEPLSKFPLIRDLQVDRTRMFESLKKV 121 Query: 140 EPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + W+ + D++ L C+ C CC+ SCP+Y ++GPA + Q Sbjct: 122 KAWIDIDGTYDLGAGPRMAPRDQEWAYPLSRCMTCGCCAESCPNYN-QKSAFIGPAAISQ 180 Query: 199 AYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E Q ERLD + P + C NC + CPK + +IA I + R Sbjct: 181 VRLFNAHPTGEMQSHERLDAVMGPGGITDCGNAQNCVRVCPKEIPLTTSIADIGRQTVFR 240 >gi|183980538|ref|YP_001848829.1| succinate dehydrogenase (iron-sulfur subunit), SdhB_1 [Mycobacterium marinum M] gi|183173864|gb|ACC38974.1| succinate dehydrogenase (iron-sulfur subunit), SdhB_1 [Mycobacterium marinum M] Length = 248 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + + N + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 LRVWRGD---ESNGELRDFTVEVN-EGEVVLDVIHRLQQTQTPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 63 AEINGKPRLMCMTRMSTFAEDEIVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFAPPK- 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E + D + +C+ C C C + N + GP L++ + Sbjct: 122 ELQPGEYRMAQVDVARSQEFRKCIECFLCQNVCHVIRDHEENKKAFAGPRFLMRIAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R + ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 182 HPLD--TRDRRNEAQEAHGLGYCNITKCCTEVCPENIKITDNALIPMKERVVDRK 234 >gi|118616889|ref|YP_905221.1| fumarate reductase iron-sulfur subunit [Mycobacterium ulcerans Agy99] gi|118568999|gb|ABL03750.1| succinate dehydrogenase (iron-sulfur subunit), SdhB_1 [Mycobacterium ulcerans Agy99] Length = 248 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + + N + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 LRVWRGD---ESNGELRDFTVEVN-EGEVVLDVIHRLQQTQTPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + V PL VI+DLV D+S Y + R I + Sbjct: 63 AEINGKPRLMCMTRMSTFAEDEIVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFAPPK- 121 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI 204 E + D + +C+ C C C + N + GP L++ + Sbjct: 122 ELQPGEYRMAQVDVARSQEFRKCIECFLCQNVCHVIRDHEENKKAFAGPRFLMRVAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R + ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 182 HPLD--TRDRRNEAQEAHGLGYCNITKCCTEVCPENIKITDNALIPMKERVVDRK 234 >gi|33242149|ref|NP_877090.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila pneumoniae TW-183] gi|33236659|gb|AAP98747.1| succinate dehydrogenase iron-sulfur protein [Chlamydophila pneumoniae TW-183] Length = 257 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 19/244 (7%) Query: 25 KNLKEY--RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 +NL+ + +IYR P G +++ + L + G V+ L+ I+ + + Sbjct: 2 ENLETFILKIYRGVP---GKQYWESFELPL-HPGENVISALMEIEKRPVNILGEKVNPVV 57 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + C E +CGSC + ++G AC I + PL +I+DL+VD S Sbjct: 58 WEQGCLEEVCGSCSILVNGVPRQACTALIQEYIDATQSREIVLAPLTKFPLIRDLIVDRS 117 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + I+ W+ + E ++ + L +C+ C CC+ +CP SD + Sbjct: 118 IMFDNLERIQGWVAADIEGETFGPQVTQEQQELLYALSQCMTCGCCTEACPQIDNKSD-F 176 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA + QA + D+ +R L + C NC + CPK L ++I+ + Sbjct: 177 IGPAAISQARYFNTYPGDKQSKKRWRALMGKGGIEGCGQAHNCVRVCPKKLPLTESISAM 236 Query: 251 KMML 254 + Sbjct: 237 GREI 240 >gi|319892139|ref|YP_004149014.1| Succinate dehydrogenase iron-sulfur protein [Staphylococcus pseudintermedius HKU10-03] gi|317161835|gb|ADV05378.1| Succinate dehydrogenase iron-sulfur protein [Staphylococcus pseudintermedius HKU10-03] gi|323464750|gb|ADX76903.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus pseudintermedius ED99] Length = 271 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 10/242 (4%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPT 73 + + I R D +P +++ + + + K + Sbjct: 15 QNSTSNKTIKLIIKRQK-DQNSSPYEESFEIPYRENMNVIAALMEIRRNPINTKGEKTTP 73 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 +T +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD + + Sbjct: 74 VTWDMNCLEEVCGACSMVINGKARQSCSAIIDQLEQPIRLEPMTTFPVIRDLQVDRTRMF 133 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ + E RQ L +C+ C C CP+ ++ ++G Sbjct: 134 DNLKRMKAWVPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TKTNSFVG 192 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + Q + + ERLD L D L C NC Q+CPKG+ +IA + Sbjct: 193 AQAISQVRLFNLHPTGAMTKDERLDALMDQGGLQACGNSQNCVQACPKGIPLTTSIAAMN 252 Query: 252 MM 253 Sbjct: 253 RE 254 >gi|297243345|ref|ZP_06927278.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Gardnerella vaginalis AMD] gi|296888592|gb|EFH27331.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Gardnerella vaginalis AMD] Length = 361 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 56/272 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + + +LD LL IK IDPTL R SC G+CGS N++G TL C Sbjct: 90 GKHWVQDYSLRVHSTD-TILDCLLTIKRTIDPTLAFRYSCGHGVCGSDAANVNGMPTLLC 148 Query: 101 ----------------------------------------------VKDMKDIKGAIAVY 114 G I + Sbjct: 149 SATIGANARPESTNSVQSRGFRKTGTTSSSSQSTKSPTLQQKSKETTTLQNGTFGIIELA 208 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLK--------TVSPKPAKELLQSHEDRQKIDG 166 PL +V +DL+ D+S SQ + +EP+L+ T E LQ E+ +K + Sbjct: 209 PLSGFAVQRDLICDISPMISQIKRLEPYLQASNVSTRNTEGKLQLIEFLQHPEELKKFEL 268 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+MC C CP Y + ++GPA L+ A R++ DSRD RLD ++ + Sbjct: 269 LSNCIMCGACEGICPIY-AGGEAFIGPAALVNAARFIYDSRDNATEHRLDLIDSSDGISA 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++ C++ CP+G++ + I ++ ++ +RK Sbjct: 328 CQSVRACSRQCPRGIDIGEEIWQLTTLVNERK 359 >gi|314936671|ref|ZP_07844018.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus hominis subsp. hominis C80] gi|313655290|gb|EFS19035.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus hominis subsp. hominis C80] Length = 285 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 10/245 (4%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKI 70 + + I R + + + +T+ + + C + + K + Sbjct: 26 THKKEKHTQKTVKLIIKRQD-NQEAKAYEETFEIPYKENLNVIACLMEIRRNPVNSKGEK 84 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + +C E +CG+C M I+G AC + ++ I + P+ VI+DL VD + Sbjct: 85 TTPVVWDMNCLEEVCGACSMVINGRARQACSAIVDQLEQPIRLEPMSTFPVIRDLQVDRT 144 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + ++ W+ + E RQ L +C+ C C CP+ +++ Sbjct: 145 RMFDNLKRMKAWIPIDGTYDLGPGPRIPEKKRQTAYELSKCMTCGVCLEVCPNV-TRNNK 203 Query: 190 YLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++G + Q + + ERL+ L L C NC +CPKG+ +IA Sbjct: 204 FIGAQAISQVRLFDLHPTGSMTKDERLNALMSEGGLQECGNSQNCVNACPKGIPLTTSIA 263 Query: 249 KIKMM 253 + Sbjct: 264 AMNRE 268 >gi|73662955|ref|YP_301736.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495470|dbj|BAE18791.1| succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 273 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLR 77 + + I R + D P M+ + + + C + + K + + Sbjct: 21 SQKTIKLIIKRQDTDQST-PYMEEFEIPYRENLNVIACLMEIRRNPVNSKGEKTTPVIWD 79 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD + + + Sbjct: 80 MNCLEEVCGACSMVINGQARQSCSAIVDQLEQPIKLEPMSTFPVIRDLQVDRTRMFDNLK 139 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C CP+ + ++G + Sbjct: 140 RMKAWVPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TKKNDFVGAQAI 198 Query: 197 LQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + ERL+ L L C NC +CPKG+ +IA + Sbjct: 199 SQVRLFNLHPTGSMTKDERLEALMGGGGLQACGNSQNCVNACPKGIPLTTSIAALNRE 256 >gi|228476259|ref|ZP_04060961.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus hominis SK119] gi|228269662|gb|EEK11164.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus hominis SK119] Length = 286 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 10/245 (4%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKI 70 + + I R + + + +T+ + + C + + K + Sbjct: 27 THKKEKHTQKTVKLIIKRQD-NQEAKAYEETFEIPYKENLNVIACLMEIRRNPVNSKGEK 85 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + +C E +CG+C M I+G AC + ++ I + P+ VI+DL VD + Sbjct: 86 TTPVVWDMNCLEEVCGACSMVINGRARQACSAIVDQLEQPIRLEPMSTFPVIRDLQVDRT 145 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + ++ W+ + E RQ L +C+ C C CP+ +++ Sbjct: 146 RMFDNLKRMKAWIPIDGTYDLGPGPRIPEKKRQTAYELSKCMTCGVCLEVCPNV-TRNNK 204 Query: 190 YLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++G + Q + + ERL+ L L C NC +CPKG+ +IA Sbjct: 205 FIGAQAISQVRLFDLHPTGSMTKDERLNALMGEGGLQECGNSQNCVNACPKGIPLTTSIA 264 Query: 249 KIKMM 253 + Sbjct: 265 AMNRE 269 >gi|332520165|ref|ZP_08396629.1| ferredoxin [Lacinutrix algicola 5H-3-7-4] gi|332044724|gb|EGI80918.1| ferredoxin [Lacinutrix algicola 5H-3-7-4] Length = 248 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 88/260 (33%), Gaps = 35/260 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + +Y+I +PD +D L N G D Sbjct: 6 KIWRQKNANDKGKMVDYKISDISPDMSFLEMLDVLNEQLINSG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG C + I+G C M+ ++ P VIK Sbjct: 52 VAFDHDCREGICGMCSLYINGEAHGPDRGVTTCQLHMRMFNDGDTIFIEPFRAKAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DLVVD S F + + + A + + E+ C+ C C SC Sbjct: 112 DLVVDRSSFDRIQHAGGFISVNTSGNTIDANAIPVNKENADDAFSAATCIGCGACVASCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 NS L + + L + E L+ + D C C CPK Sbjct: 172 ----NSSAMLFVGAKVSQFALLPQGQVEATDRVLNMVKQMDEEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L + Sbjct: 228 GISL-ENIARMNREYLAASL 246 >gi|34558215|ref|NP_908030.1| succinate dehydrogenase iron-sulfur protein [Wolinella succinogenes DSM 1740] gi|34483934|emb|CAE10930.1| SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN [Wolinella succinogenes] Length = 319 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCG-PMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I R++ Y + ++ +L LL IK D TL SCR ICG+ Sbjct: 2 KFIIDRFD---GKKNYEQIYTLAKEDIEAKTLLGVLLLIKQTQDITLNFTASCRMAICGA 58 Query: 88 CGMNIDGTNTLACVKDMK------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M + PL + VI DLVVD R I+P Sbjct: 59 CAVRVNGHSYLACDTKMTELFEEYKNSDTFRISPLGNHRVISDLVVDWEPAIENLRKIKP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 L S AKE Q+ E+ +I ++C++C C + C + + Y+ P + QA+ Sbjct: 119 GLVAKSEFSAKEGCQQNQEEFDRIIKQWDCILCGSCVSECNKFSADQSDYMEPFVFTQAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C CT CPK ++ A+ IA +++M + + + Sbjct: 179 RLANDSRSKDPMIHVKPAV-ANGLWNCVHCHECTNRCPKHISAAEDIANLRVMAMKKGL 236 >gi|182434498|ref|YP_001822217.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775023|ref|ZP_08234288.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces cf. griseus XylebKG-1] gi|178463014|dbj|BAG17534.1| putative succinate dehydrogenase iron-sulfur protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655356|gb|EGE40202.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces cf. griseus XylebKG-1] Length = 248 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 91/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R NP+ G M TY VD + L+ L + ++ D + CREG Sbjct: 4 TLRVWRQQNPETPGA--MATYEVDNISADMSFLEMLDTLNEELTLAGDEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + P VIKDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFADGDTIDIEPWRASAFPVIKDLVVDRSSFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +S T + A D EC+ C C +CP N L Sbjct: 122 IIQSGGYISAPTGTAPDAHATPVPKPDADFAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +IA + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVAQMDEEGFGGCTLTGECATACPKGIPLP-SIAAMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|121609471|ref|YP_997278.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Verminephrobacter eiseniae EF01-2] gi|121554111|gb|ABM58260.1| succinate dehydrogenase subunit B [Verminephrobacter eiseniae EF01-2] Length = 251 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 9/245 (3%) Query: 16 KIWNAPT-GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 K A T + + RI R + G +Y + +LD + I+ ++PTL Sbjct: 4 KTHAASTRDPQRMLSVRIDRGR--HAGAGDYASYLIPW-RENQTILDVVTEIQRTLEPTL 60 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHF 132 + R +CR G+CGSC M ++G C ++ ++ I + PL +M IKDLVVDMS F Sbjct: 61 SYRFACRVGVCGSCAMTVNGRPRWTCRTHVRRVEEDGQIVIEPLRNMPRIKDLVVDMSGF 120 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRY 190 + + + + + + + R++ D EC+ C C +C W +Y Sbjct: 121 FDKWKKAGNRFVGTATRNDPPANIAPQSRRRKLADAAIECINCGVCHAACDVVAW-DRQY 179 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LGPA L +A+ D R L CH+ NC CP L+P +IA + Sbjct: 180 LGPAALNRAWSLFNDERHADPRAVLRQASAGSGCNACHSQGNCMTHCPVHLSPTGSIAGL 239 Query: 251 KMMLL 255 K L Sbjct: 240 KKNAL 244 >gi|311069335|ref|YP_003974258.1| succinate dehydrogenase iron-sulfur subunit [Bacillus atrophaeus 1942] gi|310869852|gb|ADP33327.1| succinate dehydrogenase iron-sulfur subunit [Bacillus atrophaeus 1942] Length = 253 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTL 76 EK + I R + P + + + ++ + + + +K + +T Sbjct: 2 SEKKTIRFIITRQD-TADSTPYDEEFEIGYRPNLNVISALMEIRRNPVNVKGEKTTPVTW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 61 DMNCLEEVCGACSMVINGKPRQSCTALVDQLEQPIRLKPMKTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ SD ++GPA Sbjct: 121 KKVKAWVPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVNSKSD-FMGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + +RL+ L + L C NC QSCPKG+ +IA + Sbjct: 180 MSQVRLFNAHPTGAMNKSDRLEALMEDGGLADCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|269302580|gb|ACZ32680.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chlamydophila pneumoniae LPCoLN] Length = 258 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 19/244 (7%) Query: 25 KNLKEY--RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 +NL+ + +IYR P G +++ + L + G V+ L+ I+ + + Sbjct: 3 ENLETFILKIYRGIP---GKQYWESFELPL-HPGENVISALMEIEKRPVNILGEKVNPVV 58 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + C E +CGSC + ++G AC I + PL +I+DL+VD S Sbjct: 59 WEQGCLEEVCGSCSILVNGVPRQACTALIQEYIDATQSREIVLAPLTKFPLIRDLIVDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + I+ W+ + E ++ + L +C+ C CC+ +CP SD + Sbjct: 119 IMFDNLERIQGWVAADIEGETFGPQVTQEQQELLYALSQCMTCGCCTEACPQIDNKSD-F 177 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA + QA + D+ +R L + C NC + CPK L ++I+ + Sbjct: 178 IGPAAISQARYFNTYPGDKQSKKRWRALMGKGGIEGCGQAHNCVRVCPKKLPLTESISAM 237 Query: 251 KMML 254 + Sbjct: 238 GREI 241 >gi|183601405|ref|ZP_02962775.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium animalis subsp. lactis HN019] gi|219683462|ref|YP_002469845.1| iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium animalis subsp. lactis AD011] gi|241191095|ref|YP_002968489.1| Succinate dehydrogenase/fumarate reductase Fe-Sprotein subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196501|ref|YP_002970056.1| Succinate dehydrogenase/fumarate reductase Fe-Sprotein subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219011|gb|EDT89652.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium animalis subsp. lactis HN019] gi|219621112|gb|ACL29269.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium animalis subsp. lactis AD011] gi|240249487|gb|ACS46427.1| Succinate dehydrogenase/fumarate reductase Fe-Sprotein subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251055|gb|ACS47994.1| Succinate dehydrogenase/fumarate reductase Fe-Sprotein subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794084|gb|ADG33619.1| Succinate dehydrogenase/fumarate reductase Fe-Sprotein subunit [Bifidobacterium animalis subsp. lactis V9] Length = 318 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 53/261 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + L +LD LL IK IDPTL R SC G+CGS + ++GT TL C Sbjct: 53 GKSWVQEYEL-LVRPEDTLLDCLLTIKRDIDPTLAFRYSCGHGMCGSDAVAVNGTPTLLC 111 Query: 101 VKDMKDIKGA-------------------------------------------IAVYPLP 117 ++D I + LP Sbjct: 112 TAQVQDWVQRLPNISYPDDEGFRRTGDVDDADNANVFEEDLAHQIDEGDHLGVIELAALP 171 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYE 169 V +DLV D+ Q R ++P+L E LQ+ ++ K + L Sbjct: 172 GFPVKRDLVADIDSMLEQIRRLKPYLIHHNAIKTREDGKVDVLEYLQNPQELAKYELLSN 231 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP Y + ++GPA L+ R++ DSRD ERL+ L+ + C + Sbjct: 232 CIACGVCEGACPVY-AGGEAFIGPAALINQARFINDSRDTATEERLEALDTADGVQACQS 290 Query: 230 IMNCTQSCPKGLNPAKAIAKI 250 + C++ CP+G++ + I ++ Sbjct: 291 VRACSRQCPRGIDVGEEIWQL 311 >gi|157693261|ref|YP_001487723.1| succinate dehydrogenase iron-sulfur subunit [Bacillus pumilus SAFR-032] gi|157682019|gb|ABV63163.1| succinate dehydrogenase iron-sulfur protein subunit [Bacillus pumilus SAFR-032] Length = 254 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 EKN ++ I R + G P + + + V+ L+ I+ + + Sbjct: 2 SEKNTIQFIITRQD-TADGKPYDEEFEIPY-RPNMNVISALMEIRRNPVNKQGEKTTAIN 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 60 WDMNCLEEVCGACSMVINGKPRQSCTALIDKLEQPIRLQPMKTFPVVRDLQVDRSRMFNS 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C +CP+ + ++GPA Sbjct: 120 LKKVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVN-DKSSFMGPA 178 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + +RL+ + L C NC QSCPKG+ +IA + Sbjct: 179 PLSQVRLFNAHPTGAMNKSDRLEEIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|52081345|ref|YP_080136.1| succinate dehydrogenase iron-sulfur subunit [Bacillus licheniformis ATCC 14580] gi|52786723|ref|YP_092552.1| succinate dehydrogenase iron-sulfur subunit [Bacillus licheniformis ATCC 14580] gi|319647253|ref|ZP_08001475.1| SdhB protein [Bacillus sp. BT1B_CT2] gi|52004556|gb|AAU24498.1| succinate dehydrogenase (iron-sulfur protein) [Bacillus licheniformis ATCC 14580] gi|52349225|gb|AAU41859.1| SdhB [Bacillus licheniformis ATCC 14580] gi|317390600|gb|EFV71405.1| SdhB protein [Bacillus sp. BT1B_CT2] Length = 254 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 E ++ I R + + NP + + + + + K + + Sbjct: 2 SENKTIKFIITRQD-TSDSNPYQEEFEIPYRPNMNVISALMEIRRNPVNAKGEKTSPIAW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 61 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPMKTFPVVRDLQVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ ++ ++GPA Sbjct: 121 KKVKAWVPIDGTYDLGPGPRMPERRRQWAYELSKCMTCGVCLEACPNVNDKTN-FMGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 180 LSQVRLFNTHPTGAMNKSERLEAIMGDGGLAECGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|298207523|ref|YP_003715702.1| succinate dehydrogenase, iron-sulfur protein [Croceibacter atlanticus HTCC2559] gi|83850159|gb|EAP88027.1| succinate dehydrogenase, iron-sulfur protein [Croceibacter atlanticus HTCC2559] Length = 249 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + + TY +D + L+ L + ++ D + CREGI Sbjct: 4 TLKIWRQK-NADTKGGIQTYNIDGIDGDMSFLEMLDVLNEELITKGDEPVEFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CGSC + I+G C M+ + P VIKDLVVD + F Sbjct: 63 CGSCSLQINGEPHGPDRLVTTCQLHMRMFNDGDTITIEPFRAKAFPVIKDLVVDRTSFDR 122 Query: 135 --QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + ++ C+ C C +C N+ L Sbjct: 123 IQQAGGYVSVNTSGNTQDANAIPIEKQNADDAFYAATCIGCGACVAACK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + + L + E L+ + D C C CPKG++ + IA++ Sbjct: 179 TSAKVSQFALLPQGQVEATRRVLNMVEQMDKEGFGNCTNTGACEIECPKGISL-ENIARM 237 Query: 251 KMMLLDRKI 259 L+ + Sbjct: 238 NREYLNASV 246 >gi|314933346|ref|ZP_07840711.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus caprae C87] gi|313653496|gb|EFS17253.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus caprae C87] Length = 278 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 10/240 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLT 75 ++ + I R + +N+ P +T+ + + C + + K + +T Sbjct: 24 QSKQKTVKLIIKRQD-NNESKPYEETFEIPYKENLNVIACLMEIRRNPVNAKGEKTTPVT 82 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + Sbjct: 83 WDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRSRMFDN 142 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C CP+ +++++G Sbjct: 143 LKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TPNNKFVGAQ 201 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + ERLD L L C NC +CPKG+ +IA + Sbjct: 202 AISQVRLFDLHPTGSMTKDERLDALMSTGGLQECGNSQNCVNACPKGIPLTTSIAALNRE 261 >gi|303246641|ref|ZP_07332919.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio fructosovorans JJ] gi|302491981|gb|EFL51859.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio fructosovorans JJ] Length = 321 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 11/232 (4%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 + I R++ + Y G VL L++IK +DPTL SCR ICG+C Sbjct: 6 FLIDRFD---GKDTWCQRYTF-AYRPGMTVLACLIHIKEHLDPTLNFTASCRSAICGACA 61 Query: 90 MNIDGTNTLACVKDMK-----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + ++G LAC + +GA+ + PL + VI DLVV R +P L Sbjct: 62 VRVNGNAVLACDTMVDDLLKIWGEGALRISPLGNAKVISDLVVAWEEKIEHLRLAKPGLL 121 Query: 145 TVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 A + QS + Q + ++C++C C++ C + + +L P + A R+ Sbjct: 122 AKHEFSADKGCRQSPREMQAVAKQWDCILCGSCASECNKLADSGEDFLEPFVFTHAARYA 181 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DSR ++++ L++C M C CPK + P + IA ++ M + Sbjct: 182 EDSRSAEPMLHVESVL-AHGLWKCVHCMECVTKCPKHIRPGEDIAAMRHMAV 232 >gi|257056750|ref|YP_003134582.1| fumarate reductase iron-sulfur subunit [Saccharomonospora viridis DSM 43017] gi|256586622|gb|ACU97755.1| succinate dehydrogenase subunit B [Saccharomonospora viridis DSM 43017] Length = 251 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R + G + Y V+ + G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 KLRVWRGD---DGAGELRDYTVEAN-EGEVVLDLIHRLQATQAPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++G L C+ + I V P+ V++DLV D+S+ Y + R I + Sbjct: 62 SAEVNGRPRLLCMTRLSAFGEDEVITVTPMRTFPVVRDLVTDVSYNYVKAREIPAFTPP- 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 E D Q+ +C+ C C C + N + GP L++ Sbjct: 121 PELGLGEYRMQQVDVQRSQEFRKCIECFLCQNVCHVIRDHEENKPAFAGPRYLMRIAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R++ + L C+ CT+ CP+ ++ A+ +K + DR+ Sbjct: 181 MHPLDAA--DRVNEAQTEHGLGYCNITKCCTEVCPENIHITDNALIPMKERVADRR 234 >gi|313681200|ref|YP_004058938.1| succinate dehydrogenase subunit b [Sulfuricurvum kujiense DSM 16994] gi|313154060|gb|ADR32738.1| succinate dehydrogenase subunit B [Sulfuricurvum kujiense DSM 16994] Length = 233 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 17/223 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 I R N D + Y V+L+N +L L YIK KIDPTLT CR G+CGSC Sbjct: 2 NISIKRSNNDE-----VQIYNVELENT--TLLAVLNYIKTKIDPTLTYSHGCRSGVCGSC 54 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G L C K + P+ + VI+DLVVD + +++ E W+ + Sbjct: 55 AVRVNGREQLMCEYKPK---DGDVIEPIRNTRVIRDLVVDTAFVERFNQAGEAWIGSARE 111 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + S E+ ++I+ +C++C C ++CP Y N D ++GP L + +R++ D R+ Sbjct: 112 EN-----ISVEEMERIETQSDCILCTSCFSACPVYAVNPD-FIGPFALTRVWRYVNDPRE 165 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ ++ ++ C C CP+G+ P + I+ ++ Sbjct: 166 GDSSAKIAAVQT-NGIWDCTLCGECVPVCPQGIAPKQDISMLR 207 >gi|242373381|ref|ZP_04818955.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis M23864:W1] gi|242348744|gb|EES40346.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis M23864:W1] Length = 278 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 14/264 (5%) Query: 1 MVEIMLPKRSRVKRGKIWNA-PTGEKNLKEYR--IYRWNPDNKGNPCMDTYYVD------ 51 M E + K + +G + K + I R + +N+ P +T+ + Sbjct: 1 MAEQSV-KNTPDTQGNQQTEEKNQQPKQKTVKLIIKRQD-NNESKPYEETFEIPYKENLN 58 Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI 111 + C + + K + +T +C E +CG+C M I+G +C + ++ I Sbjct: 59 VIACLMEIRRNPVNAKGEKTTPVTWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPI 118 Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYEC 170 + P+ VI+DL VD S + + ++ W+ + E RQ L +C Sbjct: 119 RLEPMSTFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKC 178 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHT 229 + C C CP+ +++++G + Q + + ERLD L L C Sbjct: 179 MTCGVCLEVCPNV-TPNNKFVGAQAISQVRLFDLHPTGSMTKDERLDALMSTGGLQECGN 237 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMM 253 NC +CPKG+ +IA + Sbjct: 238 SQNCVNACPKGIPLTTSIAALNRE 261 >gi|29840722|ref|NP_829828.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila caviae GPIC] gi|29835072|gb|AAP05706.1| succinate dehydrogenase, iron-sulfur protein [Chlamydophila caviae GPIC] Length = 263 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTLRRSCRE 82 +IYR P G +++ + L + G V+ L+ I+ + + + C E Sbjct: 9 LKIYRGTP---GKQYWESFELAL-HPGENVISALMEIEKRPVNTLGETVDPVVWEQGCLE 64 Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +CGSC + ++GT AC +++ I + PL +I+DL+VD S + + Sbjct: 65 EVCGSCSLLVNGTPRQACTALIEEYIKETGSREIVLAPLTKFPLIRDLIVDRSVMFDNLQ 124 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 +I+ W+ + + S E ++ + L C+ C CC+ +CP ++D ++GPA + Sbjct: 125 NIQGWVAADADGENSGVKVSQEQQELMYALSMCMTCGCCTEACPQINEHND-FIGPAAIA 183 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QA + D+ +RL L + C NC + CPK L ++I+ + + Sbjct: 184 QARLFNTYPGDKQSKKRLRALMGKKGIEGCGQAHNCVRVCPKKLPLTESISAMGRDISKY 243 Query: 258 KI 259 + Sbjct: 244 SL 245 >gi|124009636|ref|ZP_01694309.1| fumarate reductase iron-sulfur cluster protein subunit [Microscilla marina ATCC 23134] gi|123984777|gb|EAY24757.1| fumarate reductase iron-sulfur cluster protein subunit [Microscilla marina ATCC 23134] Length = 259 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 88/256 (34%), Gaps = 30/256 (11%) Query: 29 EYRIYRWN-PDNKGNPCMD-------TYYVDLDNCGPMVLDGLLYIKN----KIDPTLTL 76 +I+R N PD N Y V + L+ L + K D + Sbjct: 4 TLQIWRQNKPDINNNGSYQNGDGKMTEYKVTDISPDMSFLEMLDELNEGLLKKGDDPVAF 63 Query: 77 RRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLV 126 CREGICG C + I+G AC M+ K +Y P V+KDLV Sbjct: 64 DHDCREGICGMCSLYINGQPHGPESGTTACQLHMRSFKDGDTIYIEPWRAKAFPVVKDLV 123 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWW 185 V+ S F ++ + + + C+ C C +C Sbjct: 124 VNRSSFDRIIQAGGYVSVNTGVTVDANEIPVAKTIADDAFNMAACIGCGACVAACK---- 179 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 N+ L + + L + E + ER+ D C C+ CPK + P Sbjct: 180 NASAMLFVSAKVSQLSLLPQGKAERKERVERMVAQMDEEGFGACTNTGACSAECPKDI-P 238 Query: 244 AKAIAKIKMMLLDRKI 259 +IA++ + KI Sbjct: 239 LSSIARMNREYFEAKI 254 >gi|194017176|ref|ZP_03055788.1| succinate dehydrogenase iron-sulfur subunit [Bacillus pumilus ATCC 7061] gi|194011044|gb|EDW20614.1| succinate dehydrogenase iron-sulfur subunit [Bacillus pumilus ATCC 7061] Length = 254 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 12/240 (5%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTLT 75 EKN ++ I R + G P + + + V+ L+ I+ + Sbjct: 2 SEKNTIQFIITRQD-TADGKPYDEEFEIPY-RPNMNVISALMEIRRNPVNKQGKKTTAIN 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + + I + P+ V++DL VD S ++ Sbjct: 60 WDMNCLEEVCGACSMVINGKPRQSCTALIDKLDQPIRLQPMKTFPVVRDLQVDRSRMFNS 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C +CP+ + ++GPA Sbjct: 120 LKKVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVN-DKSSFMGPA 178 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + +RL+ + L C NC QSCPKG+ +IA + Sbjct: 179 PLSQVRLFNAHPTGAMNKSDRLEEIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|51894309|ref|YP_077000.1| succinate dehydrogenase iron-sulfur subunit [Symbiobacterium thermophilum IAM 14863] gi|51857998|dbj|BAD42156.1| succinate dehydrogenase iron-sulfur protein [Symbiobacterium thermophilum IAM 14863] Length = 251 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 14/243 (5%) Query: 22 TGEKNLKEYRIYRWNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKI-------DPT 73 ++ E RI R + P + + + G V+ L+ I+ Sbjct: 2 ADQRKFIELRIRRQ--EAPDKPFYWEEFRIPY-RPGMNVIACLMEIQRNPVNAEGKRTTP 58 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 + +C E +CG+C M I+G AC + ++ I + PL +++DL+VD S + Sbjct: 59 VVWDSNCLEEVCGACSMVINGKARQACSALVDNLTQPIVLEPLKSFPLVRDLMVDRSRMF 118 Query: 134 SQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ W+ QS D++ + L EC+ C CC +CP+Y +D ++G Sbjct: 119 EALKRVKAWIPIDGTHDLGPGPRQSPADQEWMYKLSECMTCGCCMEACPNYNEKTD-FIG 177 Query: 193 PAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 PA + Q + + ERL+ L P + C + NC ++CPKG+ +IA+I+ Sbjct: 178 PAPISQVRLFNAHPTGKMHAHERLEALMGPGGIMECGSAQNCVRACPKGIPLTTSIAEIQ 237 Query: 252 MML 254 L Sbjct: 238 RQL 240 >gi|257459569|ref|ZP_05624678.1| O-acetylhomoserine [Campylobacter gracilis RM3268] gi|257442994|gb|EEV18128.1| O-acetylhomoserine [Campylobacter gracilis RM3268] Length = 324 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ I R++ Y + L+ G +L L +IK +D TL +CR ICG+ Sbjct: 2 KFIIDRFD---GSKNYKQAYELSLEQIKGKTLLGVLQFIKQNLDITLNFTAACRMAICGA 58 Query: 88 CGMNIDGTNTLACVKDMK------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+ + + + PL + VI DLVVD R I+P Sbjct: 59 CAVRVNGHSYLACDTKMEALLAEYENPDSFTISPLNNFRVISDLVVDWEPSIENLRKIKP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + A + QS E +++ ++C++C CC++ C ++ Y+ P + A Sbjct: 119 TITPKKEFSADKGCKQSPEQMERVKKQWDCILCGCCASECNKLGADASDYMQPFVFTHAN 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + L L+ C C CPKG++ I ++ + + + + Sbjct: 179 RAAFDSRSKDAMPHLKPAV-LNGLWLCVHCQECADRCPKGISAQSDITALRALAMKKGL 236 >gi|223043767|ref|ZP_03613810.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus capitis SK14] gi|222442864|gb|EEE48966.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus capitis SK14] Length = 278 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 12/245 (4%) Query: 19 NAPTGEKNLKEYR--IYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKI 70 + N K + I R + +N+ P +T+ + + C + + K + Sbjct: 19 KEQNQQSNQKTVKLIIKRQD-NNESKPYEETFEIPYKENLNVIACLMEIRRNPVNAKGEK 77 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 +T +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S Sbjct: 78 TTPVTWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRS 137 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + ++ W+ + E RQ L +C+ C C CP+ +++ Sbjct: 138 RMFDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TPNNK 196 Query: 190 YLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++G + Q + + ERLD L L C NC +CPKG+ +IA Sbjct: 197 FVGAQAISQVRLFDLHPTGSMTKDERLDALMSTGGLQECGNSQNCVNACPKGIPLTTSIA 256 Query: 249 KIKMM 253 + Sbjct: 257 ALNRE 261 >gi|332287883|ref|YP_004422784.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila psittaci 6BC] gi|313848455|emb|CBY17459.1| succinate dehydrogenase iron-sulfur protein [Chlamydophila psittaci RD1] gi|325507046|gb|ADZ18684.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila psittaci 6BC] gi|328915147|gb|AEB55980.1| succinate dehydrogenase, iron-sulfur protein [Chlamydophila psittaci 6BC] Length = 263 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTLRRSCRE 82 +IYR P G +++ + L + G V+ L+ I+ + + + C E Sbjct: 9 LKIYRGTP---GKQYWESFELTL-HPGENVISALMEIEKYPVNTLGETVNPVVWEQGCLE 64 Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +CGSC + ++G AC +++ I + PL +I+DL+VD S + + Sbjct: 65 EVCGSCSLLVNGVPRQACTALIEEYIRETGSREIVLAPLTKFPLIRDLIVDRSIMFDNLQ 124 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I+ W+ + S E+++ + L C+ C CC+ +CP ++D ++GPA + Sbjct: 125 KIQGWVAADVDGEHSGVKVSQEEQELMYALSMCMTCGCCTEACPQINEHND-FIGPAAIA 183 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QA + D+ +RL L + C NC + CPK L ++I+ + + Sbjct: 184 QARLFNTYPGDKHSKKRLRTLMGKKGIEGCGQAHNCVRVCPKKLPLTESISAMGREISKH 243 Query: 258 KI 259 + Sbjct: 244 SL 245 >gi|15618699|ref|NP_224985.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila pneumoniae CWL029] gi|4377100|gb|AAD18928.1| Succinate Dehydrogenase [Chlamydophila pneumoniae CWL029] Length = 258 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 19/244 (7%) Query: 25 KNLKEY--RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 +NL+ + +IYR P G +++ + L + G V+ L+ I+ + + Sbjct: 3 ENLETFILKIYRGVP---GKQYWESFELPL-HPGENVISALMEIEKRPVNILGEKVNPVV 58 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + C E +CGSC + ++G AC I + PL +I+DL+VD S Sbjct: 59 WEQGCLEEVCGSCSILVNGVPRQACTALIQEYIDATQSREIVLAPLTKFPLIRDLIVDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + I+ W+ + E ++ + L +C+ C CC+ +CP SD + Sbjct: 119 IMFDNLERIQGWVAADIEGETFGPQVTQEQQELLYALSQCMTCGCCTEACPQIDNKSD-F 177 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA + QA + D+ +R L + C NC + CPK L ++I+ + Sbjct: 178 IGPAAISQARYFNTYPGDKRSKKRWRALMGKGGIEGCGQAHNCVRVCPKKLPLTESISAV 237 Query: 251 KMML 254 + Sbjct: 238 GREI 241 >gi|84496915|ref|ZP_00995769.1| succinate dehydrogenase [Janibacter sp. HTCC2649] gi|84383683|gb|EAP99564.1| succinate dehydrogenase [Janibacter sp. HTCC2649] Length = 258 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 +I+R + + Y V++ + G +VLD + ++ L +R +C+ G CGSC Sbjct: 6 NLKIWRGD---SSGGEIKDYPVEV-SEGEVVLDAIHRVQGTQAGDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 ++G L C+ + D + I V P+ +I+DLV D+S Y + + + + Sbjct: 62 SAEVNGKPRLMCMCRLSDFEQDEVITVTPMRSFPIIRDLVSDVSFNYEKAKEVPAFAPPE 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 K D ++ +C+ C C +C + N + + GP L+ Sbjct: 122 RDADGKR-RMQQIDVERGQEFRKCIECFLCQNTCHVVRDHEENKEAFAGPRFFLRYAELD 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R +D L C+ CT+ CP+G+ AI +K ++DRK Sbjct: 181 MHPLD--TNDRRALAQDAAGLGMCNITKCCTEVCPEGIKITDNAIIPLKERVVDRK 234 >gi|124484967|ref|YP_001029583.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanocorpusculum labreanum Z] gi|124362508|gb|ABN06316.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanocorpusculum labreanum Z] Length = 481 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 19/232 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R++P P Y V + + VL+ L + + IDP R CR G CGSC Sbjct: 2 KVTISRFDPATGEPPKFVEYDVSVKDS-ARVLNVLDAVHDTIDPEFAYRHCCRGGQCGSC 60 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G LAC+++ + + PL + I+DLV D++ +Q + Sbjct: 61 AVRVNGEPVLACMQEAR---EGDIIEPL-ELPRIRDLVTDIAPVMAQMAWM--------N 108 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + ++ +++ L EC+ C C +SCP+ + Y GP I+ Q R +D RD Sbjct: 109 SGCDCTPVTQQEIEEMKPLRECIECYSCISSCPAIAASD--YKGPTIMRQEQRLNLDPRD 166 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 +G+R+ D L+ C T C + CPK + P KAI K++ R + Sbjct: 167 --KGDRILEAIDK-GLFSCTTCHKCVEVCPKEIETPRKAIEKLRAEAAKRGL 215 >gi|205374384|ref|ZP_03227182.1| succinate dehydrogenase iron-sulfur subunit [Bacillus coahuilensis m4-4] Length = 254 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 14/241 (5%) Query: 23 GEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTL 74 E + + R + P+ P ++ + V V+ L+ I+ + Sbjct: 2 SENKTILFEVVRQDMPE--SEPYVEKFKVPY-RKNMNVISALMEIRRNPINSDGKEVAPI 58 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 + C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 59 SWDMGCLEEVCGACSMVINGKPRQSCTALIDKLEQPIRLEPMRTFPVVRDLQVDRSRMFD 118 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ + E RQ L +C+ C C +CP+ SD ++GP Sbjct: 119 SLKKVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNSKSD-FIGP 177 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A L Q + + ERL+++ L C NC QSCPKG+ +IA + Sbjct: 178 APLSQVRLFNAHPTGAMNKDERLESIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNR 237 Query: 253 M 253 Sbjct: 238 D 238 >gi|289178839|gb|ADC86085.1| Succinate dehydrogenase iron-sulfur protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 336 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 53/261 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + L +LD LL IK IDPTL R SC G+CGS + ++GT TL C Sbjct: 71 GKSWVQEYEL-LVRPEDTLLDCLLTIKRDIDPTLAFRYSCGHGMCGSDAVAVNGTPTLLC 129 Query: 101 VKDMKDIKGA-------------------------------------------IAVYPLP 117 ++D I + LP Sbjct: 130 TAQVQDWVQRLPNISYPDDEGFRRTGDVDDADNANVFEEDLAHQIDEGDHLGVIELAALP 189 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKT--------VSPKPAKELLQSHEDRQKIDGLYE 169 V +DLV D+ Q R ++P+L E LQ+ ++ K + L Sbjct: 190 GFPVKRDLVADIDSMLEQIRRLKPYLIHHNAIKTREDGKVDVLEYLQNPQELAKYELLSN 249 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP Y + ++GPA L+ R++ DSRD ERL+ L+ + C + Sbjct: 250 CIACGVCEGACPVY-AGGEAFIGPAALINQARFINDSRDTATEERLEALDTADGVQACQS 308 Query: 230 IMNCTQSCPKGLNPAKAIAKI 250 + C++ CP+G++ + I ++ Sbjct: 309 VRACSRQCPRGIDVGEEIWQL 329 >gi|15836323|ref|NP_300847.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila pneumoniae J138] gi|16752251|ref|NP_445619.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila pneumoniae AR39] gi|7189996|gb|AAF38854.1| succinate dehydrogenase, iron-sulfur protein [Chlamydophila pneumoniae AR39] gi|8979163|dbj|BAA98998.1| succinate dehydrogenase [Chlamydophila pneumoniae J138] Length = 258 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 19/244 (7%) Query: 25 KNLKEY--RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLT 75 +NL+ + +IYR P G +++ + L + G V+ L+ I+ + + Sbjct: 3 ENLETFILKIYRGVP---GKQYWESFELPL-HPGENVISALMEIEKRPVNILGEKVNPVV 58 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 + C E +CGSC + ++G AC I + PL +I+DL+VD S Sbjct: 59 WEQGCLEEVCGSCSILVNGVPRQACTALIQEYIDATQSREIVLAPLTKFPLIRDLIVDRS 118 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + I+ W+ + E ++ + L +C+ C CC+ +CP SD + Sbjct: 119 IMFDNLERIQGWVAADIEGETFGPQVTQEQQELLYALSQCMTCGCCTEACPQIDNKSD-F 177 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA + QA + D+ +R L + C NC + CPK L ++I+ + Sbjct: 178 IGPAAISQARYFNTYPGDKQSKKRWRALMGKGGIEGCGQAHNCVRVCPKKLPLTESISAV 237 Query: 251 KMML 254 + Sbjct: 238 GREI 241 >gi|284989628|ref|YP_003408182.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geodermatophilus obscurus DSM 43160] gi|284062873|gb|ADB73811.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geodermatophilus obscurus DSM 43160] Length = 279 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 96/257 (37%), Gaps = 26/257 (10%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTL 74 A RI+R M TY V+ + L+ L + K+ D + Sbjct: 18 PAMAPHGMTLTLRIWRQK-GPSDKGRMVTYQVEDISPDMSFLEMLDVLNEKLILAGDDPV 76 Query: 75 TLRRSCREGICGSCGMNIDGT---------NTLACVKDMKDIKGAIAVYPLPH----MSV 121 CREGICGSCG+ I+GT T C M+ K ++ P V Sbjct: 77 VFDHDCREGICGSCGLMINGTAHGRGTSGGPTTTCQLHMRKFKDGDSIDIEPWRATAFPV 136 Query: 122 IKDLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 IKDL VD S +S T + A +L +D C+ C C +C Sbjct: 137 IKDLSVDRSALDRIIQSGGYISAPTGTAPEAHSILVPKKDSDAAFDAATCIGCGACVAAC 196 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCP 238 P N+ L A + + E ++ + +D C I C+ +CP Sbjct: 197 P----NASSMLFTAAKVSHLGLFPQGQPERDERVVNMIAQQDREGFGGCTNIGECSAACP 252 Query: 239 KGLNPAKAIAKIKMMLL 255 KG++ + I+++ LL Sbjct: 253 KGIS-MENISRLNHDLL 268 >gi|112797711|gb|ABI22179.1| fumarate reductase B [Haemophilus parasuis] gi|112797713|gb|ABI22180.1| fumarate reductase B [Haemophilus parasuis] gi|112797735|gb|ABI22191.1| fumarate reductase B [Haemophilus parasuis] gi|112797783|gb|ABI22215.1| fumarate reductase B [Haemophilus parasuis] gi|112797789|gb|ABI22218.1| fumarate reductase B [Haemophilus parasuis] gi|112797807|gb|ABI22227.1| fumarate reductase B [Haemophilus parasuis] gi|112797833|gb|ABI22240.1| fumarate reductase B [Haemophilus parasuis] gi|112797837|gb|ABI22242.1| fumarate reductase B [Haemophilus parasuis] gi|112797847|gb|ABI22247.1| fumarate reductase B [Haemophilus parasuis] gi|112797949|gb|ABI22298.1| fumarate reductase B [Haemophilus parasuis] gi|112797951|gb|ABI22299.1| fumarate reductase B [Haemophilus parasuis] gi|112797955|gb|ABI22301.1| fumarate reductase B [Haemophilus parasuis] gi|307577023|gb|ADN53113.1| fumarate reductase B [Haemophilus parasuis] gi|307577031|gb|ADN53117.1| fumarate reductase B [Haemophilus parasuis] gi|307577033|gb|ADN53118.1| fumarate reductase B [Haemophilus parasuis] gi|307577071|gb|ADN53137.1| fumarate reductase B [Haemophilus parasuis] gi|307577073|gb|ADN53138.1| fumarate reductase B [Haemophilus parasuis] gi|307577075|gb|ADN53139.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|86149110|ref|ZP_01067342.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840468|gb|EAQ57725.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|284925708|gb|ADC28060.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni IA3902] Length = 321 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|167465089|ref|ZP_02330178.1| succinate dehydrogenase iron-sulfur subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384572|ref|ZP_08058252.1| succinate dehydrogenase iron-sulfur subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150627|gb|EFX44104.1| succinate dehydrogenase iron-sulfur subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 256 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 14/248 (5%) Query: 20 APTGEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------ID 71 + I R + PD P + + + V+ L+ I+ Sbjct: 5 QTESSQKTIRLIITRQDGPDQPSYP--EEFEIPY-RPNMNVISALMEIQRNPVNASGKQT 61 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 ++ +C E +CG+C M I+G AC + ++ + + P+ V++DLV+D S Sbjct: 62 TPVSWESNCLEEVCGACSMVINGRARQACSALIDKLEQPLRIAPMKTFPVVRDLVIDRSR 121 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 ++ + ++ W+ + E RQ L C+ C C CP+ + + Sbjct: 122 MFNALKRVKAWILIDGTYDLGPGPRMAESKRQWAYELSTCMTCGVCLEVCPNVNEKTS-F 180 Query: 191 LGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +GPA + Q + E + ERLD L + + C NC ++CPKG+ +IA+ Sbjct: 181 IGPAPISQVRLFNAHPTGEMNKDERLDMLMEDGGIEGCGNSQNCVRACPKGIPLTTSIAE 240 Query: 250 IKMMLLDR 257 I R Sbjct: 241 INKDTTKR 248 >gi|112797921|gb|ABI22284.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRAFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|229822042|ref|YP_002883568.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beutenbergia cavernae DSM 12333] gi|229567955|gb|ACQ81806.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Beutenbergia cavernae DSM 12333] Length = 250 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + + + V+++ G +VLD L ++ P L +R +C+ G CGSC Sbjct: 7 FRVWRGD---DDGGELRDFDVEVN-EGEVVLDVLHRLQATQTPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + + P+ VI+DLV D+S Y++ R + + Sbjct: 63 AEINGRPRLLCMTRMSVFTPDEVVTITPMRTFPVIRDLVTDVSFNYTKAREVPSFTPPAD 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS---DRYLGPAILLQAYRWLI 204 E D ++ +C+ C C +C + + + GP L++ + Sbjct: 123 -LAPGEYRMQQMDVERSQEFRKCIECFLCQNTCHVVRDHDENKEAFSGPRYLMRVAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R+ ++ L C+ CT CP+ + A+ +K + DR+ Sbjct: 182 HPLDVV--DRVPAAQEEHGLGLCNITKCCTDVCPEHIQITDNALIPMKERVADRR 234 >gi|229918344|ref|YP_002886990.1| succinate dehydrogenase iron-sulfur subunit [Exiguobacterium sp. AT1b] gi|229469773|gb|ACQ71545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Exiguobacterium sp. AT1b] Length = 266 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 12/241 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTL 74 E+ + I R + + + V V+ L+ I+ + Sbjct: 6 QSEQKDIRFIIERQD-GPDQATYTEEFTVPY-RPNMNVISALMEIRRNPVNANGDKTTPI 63 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD + Sbjct: 64 NWDMNCLEEVCGACSMIINGKPRQSCTALVDKLEQPIRLAPMKTFPVIRDLQVDRQRMFD 123 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ + E+ RQ L +C+ C C +CP+ SD ++GP Sbjct: 124 ALKKVKAWVPIDGTYDLGPGPRMPENKRQWAYELSKCMTCGVCLEACPNVNDKSD-FIGP 182 Query: 194 AILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + Q + F E RL+ L + + +C NC + CPKG+ +IA + Sbjct: 183 AAISQVRLFNSHPTGAFHAEDRLEALMEDGGIMQCGNAQNCVEVCPKGIPLTTSIASMNR 242 Query: 253 M 253 Sbjct: 243 Q 243 >gi|261337237|ref|ZP_05965121.1| succinate dehydrogenase, iron-sulfur subunit [Bifidobacterium gallicum DSM 20093] gi|270277593|gb|EFA23447.1| succinate dehydrogenase, iron-sulfur subunit [Bifidobacterium gallicum DSM 20093] Length = 347 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 54/265 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + + + +L+ LL IK +IDPTL R SC G+CGS ++I+GT L C Sbjct: 85 GKNWVQDYALTV-SPDDTLLETLLRIKREIDPTLAFRYSCGHGMCGSDAVSINGTPALLC 143 Query: 101 V----------------------------------------KDMKDIKGAIAVYPLPHMS 120 G I + PLP Sbjct: 144 TAIVRDIARPERPLAADTDEEGFRKTGPEIPAPPASTQPTSTATPQHLGVIELAPLPGFP 203 Query: 121 VIKDLVVDMSHFYSQHRSIEPW--------LKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V +DL+VD+ Q + ++P+ E LQ E K + L C++ Sbjct: 204 VQRDLIVDIDQMLEQIKRLKPYLISDGVLATTNDGKVDVFEFLQKPEALAKYEILTNCIL 263 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C +CP Y + ++GPA L+ R++ D RD ERL+ ++ + C ++ Sbjct: 264 CGVCEGACPVY-SGGEAFVGPAALINQARFVRDDRDLATQERLETIDTADGINACQSVRA 322 Query: 233 CTQSCPKGLNPAK----AIAKIKMM 253 C++ CPKG++ + IA++K Sbjct: 323 CSRPCPKGIDVGEEVWQLIAQVKER 347 >gi|307577027|gb|ADN53115.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDRQK------------IDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELEKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|57237494|ref|YP_178508.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni RM1221] gi|57166298|gb|AAW35077.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni RM1221] gi|315057860|gb|ADT72189.1| Succinate dehydrogenase iron-sulfur protein [Campylobacter jejuni subsp. jejuni S3] Length = 321 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|116747623|ref|YP_844310.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Syntrophobacter fumaroxidans MPOB] gi|116696687|gb|ABK15875.1| succinate dehydrogenase subunit B [Syntrophobacter fumaroxidans MPOB] Length = 220 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 16/226 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +I R++P P + V ++ VLD LL + D L+ RRSCR ICGSC Sbjct: 5 LKISRFDPGMDTAPRFQRFVVGVE-PNQTVLDALLC-AWRQDIGLSFRRSCRSAICGSCA 62 Query: 90 MNIDGTNTLACVKDMKD---IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 + I+G LAC M+ + + PLPH ++KDLVVD+ F+ +++ PWL Sbjct: 63 VRINGRPALACQTLMEKAVAEGEPVTIEPLPHFKLLKDLVVDLEPFFESLKAVVPWLILR 122 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 S E + ++ C++C C + L PA L++A R D Sbjct: 123 EDYGG---RMSPEVARSLEHPATCILCGVCEAD-----SETSETLHPAGLVKALRLARDP 174 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RD R+ L+ P + R + CPKG+ I ++ Sbjct: 175 RDALGAHRIRLLQVPVEVLR-LFVRELPDKCPKGIEITDDI--LRR 217 >gi|27467760|ref|NP_764397.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis ATCC 12228] gi|251810597|ref|ZP_04825070.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282876403|ref|ZP_06285270.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis SK135] gi|293366869|ref|ZP_06613545.1| succinate dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315304|gb|AAO04439.1|AE016746_229 succinate dehydrogenase iron-sulfur protein subunit [Staphylococcus epidermidis ATCC 12228] gi|251805757|gb|EES58414.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281295428|gb|EFA87955.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis SK135] gi|291319170|gb|EFE59540.1| succinate dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|329730028|gb|EGG66419.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis VCU144] gi|329734425|gb|EGG70738.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis VCU045] gi|329736324|gb|EGG72596.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis VCU028] Length = 280 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLR 77 ++ + I R + +++ P +++ + + C + + K + +T Sbjct: 28 KQKTVKLIIKRQD-NSESKPYEESFEIPYKENLNVIACLMEIRRNPVNSKGEKTTPVTWD 86 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + + Sbjct: 87 MNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRSRMFDNLK 146 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C CP+ +++++G + Sbjct: 147 RMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TKNNKFVGAQAI 205 Query: 197 LQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + ERLD L L C NC +CPKG+ +IA + Sbjct: 206 SQVRLFDLHPTGSMTKDERLDALMSAGGLQECGNSQNCVNACPKGIPLTTSIAAMNRE 263 >gi|254822188|ref|ZP_05227189.1| fumarate reductase iron-sulfur subunit [Mycobacterium intracellulare ATCC 13950] Length = 252 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 R++R + + + + V+++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 TIRVWRGD---ERGGELRDFSVEVN-EGEVVLDVIHRLQATQVPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V P+ VI+DLV D+S Y + R I + Sbjct: 62 SAEINGYPKLMCMTRMSTFAEDEVVTVTPMRAFPVIRDLVTDVSFNYEKAREIPSFAPPK 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWL 203 E + D ++ +C+ C C C + D Y GP + ++ Sbjct: 122 D-LLPGEYRMAQADVERSQEFRKCIECFLCQDVCHVIRDHEDNKKAYAGPRMFIRLAELE 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R D +D L C+ CT+ CP+ + AI +K ++ R+ Sbjct: 181 MHPLD--TADRRDLAQDQQGLGLCNITKCCTEVCPEHIKITDNAIIPMKERVIGRR 234 >gi|117929071|ref|YP_873622.1| fumarate reductase iron-sulfur subunit [Acidothermus cellulolyticus 11B] gi|117649534|gb|ABK53636.1| succinate dehydrogenase subunit B [Acidothermus cellulolyticus 11B] Length = 260 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 13/234 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R++R + + + + V ++ G +VLD + ++ L +R +C+ G CGSC Sbjct: 6 KLRVWRGD---ENGGRLVDFTVPVE-EGEVVLDAIHRLQATQAGDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMK--DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ + D + I V P+ VI+DLV D+S Y + +S+ P+ Sbjct: 62 SAEINGKPRLMCMTRLSLFDPQETITVTPMRTFPVIRDLVTDVSFNYEKAKSVPPFTPPA 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 E D ++ +C+ C C C + N R+ GP ++ Sbjct: 122 D-LAPGEYRMQQVDVERSQEFRKCIECFLCQDVCHVIRDHEENKPRFAGPRFFIRYAELD 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLD 256 + D +R L + + C+ CT+ CP+G+ AI +K ++D Sbjct: 181 MHPLD--TLDRKQQLREEHGIGFCNITKCCTEVCPEGIKITDNAIIPMKERVVD 232 >gi|57866659|ref|YP_188315.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis RP62A] gi|242242449|ref|ZP_04796894.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis W23144] gi|57637317|gb|AAW54105.1| succinate dehydrogenase, iron-sulfur protein [Staphylococcus epidermidis RP62A] gi|242234099|gb|EES36411.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis W23144] Length = 280 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLR 77 ++ + I R + +++ P +++ + + C + + K + +T Sbjct: 28 KQKTVKLIIKRQD-NSESKPYEESFEIPYKENLNVIACLMEIRRNPVNSKGEKTTPVTWD 86 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + + Sbjct: 87 MNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMSTFPVIRDLQVDRSRMFDNLK 146 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C CP+ +++++G + Sbjct: 147 RMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TKNNKFVGAQAI 205 Query: 197 LQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + ERLD L L C NC +CPKG+ +IA + Sbjct: 206 SQVRLFDLHPTGSMTKDERLDALMSAGGLQECGNSQNCVNACPKGIPLTTSIAAMNRE 263 >gi|112797705|gb|ABI22176.1| fumarate reductase B [Haemophilus parasuis] gi|112797709|gb|ABI22178.1| fumarate reductase B [Haemophilus parasuis] gi|112797719|gb|ABI22183.1| fumarate reductase B [Haemophilus parasuis] gi|112797721|gb|ABI22184.1| fumarate reductase B [Haemophilus parasuis] gi|112797727|gb|ABI22187.1| fumarate reductase B [Haemophilus parasuis] gi|112797729|gb|ABI22188.1| fumarate reductase B [Haemophilus parasuis] gi|112797731|gb|ABI22189.1| fumarate reductase B [Haemophilus parasuis] gi|112797733|gb|ABI22190.1| fumarate reductase B [Haemophilus parasuis] gi|112797737|gb|ABI22192.1| fumarate reductase B [Haemophilus parasuis] gi|112797739|gb|ABI22193.1| fumarate reductase B [Haemophilus parasuis] gi|112797741|gb|ABI22194.1| fumarate reductase B [Haemophilus parasuis] gi|112797743|gb|ABI22195.1| fumarate reductase B [Haemophilus parasuis] gi|112797745|gb|ABI22196.1| fumarate reductase B [Haemophilus parasuis] gi|112797747|gb|ABI22197.1| fumarate reductase B [Haemophilus parasuis] gi|112797749|gb|ABI22198.1| fumarate reductase B [Haemophilus parasuis] gi|112797751|gb|ABI22199.1| fumarate reductase B [Haemophilus parasuis] gi|112797753|gb|ABI22200.1| fumarate reductase B [Haemophilus parasuis] gi|112797755|gb|ABI22201.1| fumarate reductase B [Haemophilus parasuis] gi|112797757|gb|ABI22202.1| fumarate reductase B [Haemophilus parasuis] gi|112797759|gb|ABI22203.1| fumarate reductase B [Haemophilus parasuis] gi|112797761|gb|ABI22204.1| fumarate reductase B [Haemophilus parasuis] gi|112797763|gb|ABI22205.1| fumarate reductase B [Haemophilus parasuis] gi|112797765|gb|ABI22206.1| fumarate reductase B [Haemophilus parasuis] gi|112797767|gb|ABI22207.1| fumarate reductase B [Haemophilus parasuis] gi|112797769|gb|ABI22208.1| fumarate reductase B [Haemophilus parasuis] gi|112797771|gb|ABI22209.1| fumarate reductase B [Haemophilus parasuis] gi|112797773|gb|ABI22210.1| fumarate reductase B [Haemophilus parasuis] gi|112797777|gb|ABI22212.1| fumarate reductase B [Haemophilus parasuis] gi|112797781|gb|ABI22214.1| fumarate reductase B [Haemophilus parasuis] gi|112797785|gb|ABI22216.1| fumarate reductase B [Haemophilus parasuis] gi|112797787|gb|ABI22217.1| fumarate reductase B [Haemophilus parasuis] gi|112797791|gb|ABI22219.1| fumarate reductase B [Haemophilus parasuis] gi|112797793|gb|ABI22220.1| fumarate reductase B [Haemophilus parasuis] gi|112797795|gb|ABI22221.1| fumarate reductase B [Haemophilus parasuis] gi|112797797|gb|ABI22222.1| fumarate reductase B [Haemophilus parasuis] gi|112797799|gb|ABI22223.1| fumarate reductase B [Haemophilus parasuis] gi|112797801|gb|ABI22224.1| fumarate reductase B [Haemophilus parasuis] gi|112797803|gb|ABI22225.1| fumarate reductase B [Haemophilus parasuis] gi|112797805|gb|ABI22226.1| fumarate reductase B [Haemophilus parasuis] gi|112797811|gb|ABI22229.1| fumarate reductase B [Haemophilus parasuis] gi|112797813|gb|ABI22230.1| fumarate reductase B [Haemophilus parasuis] gi|112797815|gb|ABI22231.1| fumarate reductase B [Haemophilus parasuis] gi|112797817|gb|ABI22232.1| fumarate reductase B [Haemophilus parasuis] gi|112797819|gb|ABI22233.1| fumarate reductase B [Haemophilus parasuis] gi|112797821|gb|ABI22234.1| fumarate reductase B [Haemophilus parasuis] gi|112797823|gb|ABI22235.1| fumarate reductase B [Haemophilus parasuis] gi|112797827|gb|ABI22237.1| fumarate reductase B [Haemophilus parasuis] gi|112797829|gb|ABI22238.1| fumarate reductase B [Haemophilus parasuis] gi|112797831|gb|ABI22239.1| fumarate reductase B [Haemophilus parasuis] gi|112797835|gb|ABI22241.1| fumarate reductase B [Haemophilus parasuis] gi|112797841|gb|ABI22244.1| fumarate reductase B [Haemophilus parasuis] gi|112797845|gb|ABI22246.1| fumarate reductase B [Haemophilus parasuis] gi|112797849|gb|ABI22248.1| fumarate reductase B [Haemophilus parasuis] gi|112797851|gb|ABI22249.1| fumarate reductase B [Haemophilus parasuis] gi|112797853|gb|ABI22250.1| fumarate reductase B [Haemophilus parasuis] gi|112797855|gb|ABI22251.1| fumarate reductase B [Haemophilus parasuis] gi|112797859|gb|ABI22253.1| fumarate reductase B [Haemophilus parasuis] gi|112797863|gb|ABI22255.1| fumarate reductase B [Haemophilus parasuis] gi|112797865|gb|ABI22256.1| fumarate reductase B [Haemophilus parasuis] gi|112797867|gb|ABI22257.1| fumarate reductase B [Haemophilus parasuis] gi|112797869|gb|ABI22258.1| fumarate reductase B [Haemophilus parasuis] gi|112797871|gb|ABI22259.1| fumarate reductase B [Haemophilus parasuis] gi|112797873|gb|ABI22260.1| fumarate reductase B [Haemophilus parasuis] gi|112797875|gb|ABI22261.1| fumarate reductase B [Haemophilus parasuis] gi|112797877|gb|ABI22262.1| fumarate reductase B [Haemophilus parasuis] gi|112797879|gb|ABI22263.1| fumarate reductase B [Haemophilus parasuis] gi|112797883|gb|ABI22265.1| fumarate reductase B [Haemophilus parasuis] gi|112797885|gb|ABI22266.1| fumarate reductase B [Haemophilus parasuis] gi|112797887|gb|ABI22267.1| fumarate reductase B [Haemophilus parasuis] gi|112797889|gb|ABI22268.1| fumarate reductase B [Haemophilus parasuis] gi|112797891|gb|ABI22269.1| fumarate reductase B [Haemophilus parasuis] gi|112797893|gb|ABI22270.1| fumarate reductase B [Haemophilus parasuis] gi|112797895|gb|ABI22271.1| fumarate reductase B [Haemophilus parasuis] gi|112797897|gb|ABI22272.1| fumarate reductase B [Haemophilus parasuis] gi|112797899|gb|ABI22273.1| fumarate reductase B [Haemophilus parasuis] gi|112797901|gb|ABI22274.1| fumarate reductase B [Haemophilus parasuis] gi|112797903|gb|ABI22275.1| fumarate reductase B [Haemophilus parasuis] gi|112797905|gb|ABI22276.1| fumarate reductase B [Haemophilus parasuis] gi|112797907|gb|ABI22277.1| fumarate reductase B [Haemophilus parasuis] gi|112797909|gb|ABI22278.1| fumarate reductase B [Haemophilus parasuis] gi|112797911|gb|ABI22279.1| fumarate reductase B [Haemophilus parasuis] gi|112797913|gb|ABI22280.1| fumarate reductase B [Haemophilus parasuis] gi|112797915|gb|ABI22281.1| fumarate reductase B [Haemophilus parasuis] gi|112797919|gb|ABI22283.1| fumarate reductase B [Haemophilus parasuis] gi|112797927|gb|ABI22287.1| fumarate reductase B [Haemophilus parasuis] gi|112797929|gb|ABI22288.1| fumarate reductase B [Haemophilus parasuis] gi|112797931|gb|ABI22289.1| fumarate reductase B [Haemophilus parasuis] gi|112797933|gb|ABI22290.1| fumarate reductase B [Haemophilus parasuis] gi|112797937|gb|ABI22292.1| fumarate reductase B [Haemophilus parasuis] gi|112797941|gb|ABI22294.1| fumarate reductase B [Haemophilus parasuis] gi|112797943|gb|ABI22295.1| fumarate reductase B [Haemophilus parasuis] gi|112797953|gb|ABI22300.1| fumarate reductase B [Haemophilus parasuis] gi|112797957|gb|ABI22302.1| fumarate reductase B [Haemophilus parasuis] gi|112797959|gb|ABI22303.1| fumarate reductase B [Haemophilus parasuis] gi|112797961|gb|ABI22304.1| fumarate reductase B [Haemophilus parasuis] gi|112797963|gb|ABI22305.1| fumarate reductase B [Haemophilus parasuis] gi|112797965|gb|ABI22306.1| fumarate reductase B [Haemophilus parasuis] gi|148541654|gb|ABQ88296.1| fumarate reductase B [Haemophilus parasuis] gi|148541656|gb|ABQ88297.1| fumarate reductase B [Haemophilus parasuis] gi|148541658|gb|ABQ88298.1| fumarate reductase B [Haemophilus parasuis] gi|148724129|gb|ABR08366.1| fumarate reductase B [Haemophilus parasuis] gi|148724131|gb|ABR08367.1| fumarate reductase B [Haemophilus parasuis] gi|307577017|gb|ADN53110.1| fumarate reductase B [Haemophilus parasuis] gi|307577019|gb|ADN53111.1| fumarate reductase B [Haemophilus parasuis] gi|307577021|gb|ADN53112.1| fumarate reductase B [Haemophilus parasuis] gi|307577025|gb|ADN53114.1| fumarate reductase B [Haemophilus parasuis] gi|307577035|gb|ADN53119.1| fumarate reductase B [Haemophilus parasuis] gi|307577037|gb|ADN53120.1| fumarate reductase B [Haemophilus parasuis] gi|307577039|gb|ADN53121.1| fumarate reductase B [Haemophilus parasuis] gi|307577041|gb|ADN53122.1| fumarate reductase B [Haemophilus parasuis] gi|307577043|gb|ADN53123.1| fumarate reductase B [Haemophilus parasuis] gi|307577045|gb|ADN53124.1| fumarate reductase B [Haemophilus parasuis] gi|307577047|gb|ADN53125.1| fumarate reductase B [Haemophilus parasuis] gi|307577049|gb|ADN53126.1| fumarate reductase B [Haemophilus parasuis] gi|307577051|gb|ADN53127.1| fumarate reductase B [Haemophilus parasuis] gi|307577053|gb|ADN53128.1| fumarate reductase B [Haemophilus parasuis] gi|307577055|gb|ADN53129.1| fumarate reductase B [Haemophilus parasuis] gi|307577057|gb|ADN53130.1| fumarate reductase B [Haemophilus parasuis] gi|307577059|gb|ADN53131.1| fumarate reductase B [Haemophilus parasuis] gi|307577063|gb|ADN53133.1| fumarate reductase B [Haemophilus parasuis] gi|307577067|gb|ADN53135.1| fumarate reductase B [Haemophilus parasuis] gi|307577069|gb|ADN53136.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|112797715|gb|ABI22181.1| fumarate reductase B [Haemophilus parasuis] gi|112797723|gb|ABI22185.1| fumarate reductase B [Haemophilus parasuis] gi|112797725|gb|ABI22186.1| fumarate reductase B [Haemophilus parasuis] gi|112797779|gb|ABI22213.1| fumarate reductase B [Haemophilus parasuis] gi|112797839|gb|ABI22243.1| fumarate reductase B [Haemophilus parasuis] gi|112797843|gb|ABI22245.1| fumarate reductase B [Haemophilus parasuis] gi|112797861|gb|ABI22254.1| fumarate reductase B [Haemophilus parasuis] gi|112797881|gb|ABI22264.1| fumarate reductase B [Haemophilus parasuis] gi|112797917|gb|ABI22282.1| fumarate reductase B [Haemophilus parasuis] gi|112797923|gb|ABI22285.1| fumarate reductase B [Haemophilus parasuis] gi|112797925|gb|ABI22286.1| fumarate reductase B [Haemophilus parasuis] gi|112797945|gb|ABI22296.1| fumarate reductase B [Haemophilus parasuis] gi|307577029|gb|ADN53116.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRAFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|257437222|gb|ACV53598.1| succinate dehydrogenase iron-sulfur protein [Agrobacterium sp. ATCC 31749] Length = 140 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 107/140 (76%), Positives = 121/140 (86%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G KN++EYRIYRWNPD+ NP +DTYY+D+D+CGPMVLD LLYIKN IDPTLTLRR Sbjct: 1 PKPDGAKNVREYRIYRWNPDDGQNPRIDTYYIDVDDCGPMVLDALLYIKNNIDPTLTLRR 60 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MNIDGTNTLAC K M++IKG + VYPLPHM V+KDLV D+S+FY+QHRS Sbjct: 61 SCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRS 120 Query: 139 IEPWLKTVSPKPAKELLQSH 158 IEPWLKTVSP PAKE QSH Sbjct: 121 IEPWLKTVSPAPAKEWKQSH 140 >gi|315931121|gb|EFV10095.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Campylobacter jejuni subsp. jejuni 327] Length = 321 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A+ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAERGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|86151652|ref|ZP_01069866.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153896|ref|ZP_01072099.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612437|ref|YP_001000146.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|157414733|ref|YP_001481989.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167005105|ref|ZP_02270863.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|283955863|ref|ZP_06373353.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 1336] gi|315123990|ref|YP_004065994.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841281|gb|EAQ58529.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842857|gb|EAQ60069.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250354|gb|EAQ73312.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|157385697|gb|ABV52012.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 81116] gi|283792523|gb|EFC31302.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 1336] gi|307747372|gb|ADN90642.1| succinate dehydrogenase iron-sulfur protein [Campylobacter jejuni subsp. jejuni M1] gi|315017712|gb|ADT65805.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 321 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|148925820|ref|ZP_01809507.1| succinate dehydrogenase flavoprotein subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|145844806|gb|EDK21910.1| succinate dehydrogenase flavoprotein subunit [Campylobacter jejuni subsp. jejuni CG8486] Length = 321 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPLSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|154686978|ref|YP_001422139.1| succinate dehydrogenase iron-sulfur subunit [Bacillus amyloliquefaciens FZB42] gi|154352829|gb|ABS74908.1| SdhB [Bacillus amyloliquefaciens FZB42] Length = 252 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWN-PDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTL 76 + + I R + P+ P + + ++ + + + + K + + Sbjct: 2 SEKKIRFIITRQDTPE--SAPYDEEFEINYRPNLNVISALMEIRRNPVNAKGEKTTPVAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 60 DMNCLEEVCGACSMVINGRPRQSCTALIDKLEQPIRLKPMKTFPVVRDLQVDRSRMFDSL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + +++GPA Sbjct: 120 KKVKAWVPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVN-SKSKFMGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + ERL+ L L C NC QSCPKG+ +IA + Sbjct: 179 MSQVRLFNAHPTGAMNKAERLEALMTDGGLGDCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|149183300|ref|ZP_01861741.1| succinate dehydrogenase iron-sulfur subunit [Bacillus sp. SG-1] gi|148848993|gb|EDL63202.1| succinate dehydrogenase iron-sulfur subunit [Bacillus sp. SG-1] Length = 254 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 E + I R + + + + + + +K + + Sbjct: 2 SENKTVRFIITRQD-SPDTESYTEEFELAYRPNMNVISALMEIRRNPVNVKGETTTPVNW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL+VD S + Sbjct: 61 DMNCLEEVCGACSMVINGKPRQSCTALVDKLEQPIRLAPMKTFPVVRDLIVDRSRMFDSL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ SD ++GPA Sbjct: 121 KKVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNSKSD-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 180 LSQVRLFNAHPTGAMNKDERLETIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|84489839|ref|YP_448071.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanosphaera stadtmanae DSM 3091] gi|84373158|gb|ABC57428.1| TfrB [Methanosphaera stadtmanae DSM 3091] Length = 498 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 12/234 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + I R+NP+ M++Y ++ + VLD L I +K D + R SCR G CG Sbjct: 1 MITVNIKRYNPETN-KQYMESYEIEHTDK-MKVLDALQQINDKYDAKIAYRYSCRAGQCG 58 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KT 145 SC + I+G LAC +I + PL VIKDL+VD S + + ++ Sbjct: 59 SCAIKINGQAKLACK---AEINDNDTLEPLD-FKVIKDLIVDRSPLNKKVNDLNLYMASE 114 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + K + + E + + L C+ C C + CP S ++GP + D Sbjct: 115 SNEKLLEPEIIKPETYAQTEALRGCIDCYSCISMCPVIK-KSTEFIGPYFMRAFSDLSFD 173 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP-AKAIAKIKMMLLDRK 258 R++ LY C + C+++CPK ++ K I K++ RK Sbjct: 174 PREDTSKSEDAI---DSGLYSCTSCGQCSKTCPKEIDIYGKGIEKLRATAFARK 224 >gi|112797775|gb|ABI22211.1| fumarate reductase B [Haemophilus parasuis] gi|112797809|gb|ABI22228.1| fumarate reductase B [Haemophilus parasuis] gi|112797825|gb|ABI22236.1| fumarate reductase B [Haemophilus parasuis] gi|112797857|gb|ABI22252.1| fumarate reductase B [Haemophilus parasuis] gi|112797947|gb|ABI22297.1| fumarate reductase B [Haemophilus parasuis] gi|307577077|gb|ADN53140.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGRAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|307577065|gb|ADN53134.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRAFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGRAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|205355319|ref|ZP_03222090.1| putative succinate dehydrogenase iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346553|gb|EDZ33185.1| putative succinate dehydrogenase iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 321 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|312195937|ref|YP_004015998.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia sp. EuI1c] gi|311227273|gb|ADP80128.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia sp. EuI1c] Length = 249 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 93/249 (37%), Gaps = 25/249 (10%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R P+ G + Y +D + L+ L + K+ +T CREG Sbjct: 4 TLRIWRQTGPEAPGE--LVDYQLDDVSPDMSFLEMLDVLNEKLILDGAIPVTFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICGSCGM ++G C M+ + P V+KDL+VD S F Sbjct: 62 ICGSCGMVVNGAPHGPQTLTTTCQLHMRSFSDGDTIVVEPWRSAAFPVVKDLMVDRSAFD 121 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S + T + A L D EC+ C C +CP N L Sbjct: 122 RIIQSGGYVSVSTGAAPEAHSQLVPKPDADLAFENAECIGCGACVAACP----NGSSMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E L+ + D C CT +CPKG+ P +IA++ Sbjct: 178 VSAKISHLNVLPQGQPERASRVLNMVEQMDAEGFGGCTNTGECTNACPKGI-PQSSIARL 236 Query: 251 KMMLLDRKI 259 L + Sbjct: 237 NKEFLRASL 245 >gi|112797707|gb|ABI22177.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA+L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAVLTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|172058165|ref|YP_001814625.1| succinate dehydrogenase iron-sulfur subunit [Exiguobacterium sibiricum 255-15] gi|171990686|gb|ACB61608.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Exiguobacterium sibiricum 255-15] Length = 268 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 12/237 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTLRR 78 ++ + R + G + + V V+ L+ I+ + + Sbjct: 12 KPVQFIVQRQD-GPDGKAYDEAFEVPY-RPNMNVISALMEIRRNPVNAAGEKTTPINWDM 69 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C E +CG+C M I+GT +C + ++ I + P+ +++DL VD + + Sbjct: 70 GCLEEVCGACSMVINGTPRQSCTALVDKLEQPIRLQPMQTFPIVRDLQVDRQRMFDALKK 129 Query: 139 IEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ + E+ RQ L +C+ C C +CP+ S+ ++GPA + Sbjct: 130 VKAWVPIDGTYDLGPGPRMPENKRQWAYELSKCMTCGVCLEACPNVNDRSN-FIGPASIS 188 Query: 198 QAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + F + ERL+ L + + +C NC + CPKG+ +IA + Sbjct: 189 QVRLFNSHPTGAFHKEERLEALMEDGGIMQCGNAQNCVEVCPKGIPLTTSIAAMNRQ 245 >gi|271969647|ref|YP_003343843.1| succinate dehydrogenase/fumarate reductase iron- sulfur subunit [Streptosporangium roseum DSM 43021] gi|270512822|gb|ACZ91100.1| succinate dehydrogenase/fumarate reductase iron- sulfur subunit [Streptosporangium roseum DSM 43021] Length = 245 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 84/257 (32%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W P + + Y + +PD +D L G D Sbjct: 6 KVWRQKGPEDKGRMVTYGVEDVSPDMSFLEMLDVLNERLILEG--------------DDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGA--IAVYPLPH--MSVIK 123 + CREGICG CGM I+G C M+ + I + P V+K Sbjct: 52 VAFDHDCREGICGMCGMVINGVAHGEQVATTTCQLHMRHFEDNAVITIEPWRAAPFPVVK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + S A + D C+ C C +CP Sbjct: 112 DLVVDRSAFDRIIQAGGFVSVPAGSAPDAHSVPVKKVDADAAFDAATCIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E + D C CT CPKG Sbjct: 171 ---NGSASLFTAAKITHLSLLPQGQPERDSRAKAMVEQMDAEGFGGCTNTGECTAVCPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + P IA++ L Sbjct: 228 I-PLDTIAQMNRDYLRA 243 >gi|78776239|ref|YP_392554.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Sulfurimonas denitrificans DSM 1251] gi|78496779|gb|ABB43319.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Sulfurimonas denitrificans DSM 1251] Length = 234 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 D+ G +L+ L IK K+D TLT CR +CGSC + ++G LAC + Sbjct: 13 EYDVSLQGVTLLEVLNEIKYKLDATLTFNSGCRSSVCGSCALRVNGREVLACSYKAE--- 69 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V PL + + +DLVV+M YS + + W + A+ + + ED + Sbjct: 70 DGDVVEPLLNSPIERDLVVNMDKAYSFNAKAKAWQSS----FAQHVKLTDEDEMRNALQS 125 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C++C C ++CP Y N +LGP L + +R++ D R+E ++DN++ ++ C Sbjct: 126 DCILCGSCYSACPVYEVNK-EFLGPFSLTRVWRYVSDKREENPKGKIDNIQ-INGVWDCT 183 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 CT CP+G++ I K++ + Sbjct: 184 LCNACTLVCPQGISSKADIEKLRARSV 210 >gi|294501459|ref|YP_003565159.1| succinate dehydrogenase, iron-sulfur protein [Bacillus megaterium QM B1551] gi|295706807|ref|YP_003599882.1| succinate dehydrogenase, iron-sulfur protein [Bacillus megaterium DSM 319] gi|294351396|gb|ADE71725.1| succinate dehydrogenase, iron-sulfur protein [Bacillus megaterium QM B1551] gi|294804466|gb|ADF41532.1| succinate dehydrogenase, iron-sulfur protein [Bacillus megaterium DSM 319] Length = 257 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 12/237 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP-------TLTLRR 78 + I R + + P + + V+ L+ I+ + Sbjct: 9 KTVRFIITRQD-SAESAPYNQEFEIPY-RPNMNVISALMEIRRNPVDASGKEVAPINWEM 66 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + + Sbjct: 67 NCLEEVCGACSMVINGKPRQSCTALVDKLEQPIRLQPMKTFPVVRDLQVDRSRMFDSLKK 126 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ + E RQ L +C+ C C +CP+ + ++GPA L Sbjct: 127 VKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVN-DKSNFIGPAPLS 185 Query: 198 QAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + +GERL+ + L C NC QSCPKG+ +IA + Sbjct: 186 QVRLFNAHPTGALNKGERLETIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 242 >gi|94969599|ref|YP_591647.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Koribacter versatilis Ellin345] gi|94551649|gb|ABF41573.1| succinate dehydrogenase subunit B [Candidatus Koribacter versatilis Ellin345] Length = 249 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 12/245 (4%) Query: 24 EKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN------KIDPTLTL 76 ++I R NPD P + + + ++ + N K +T Sbjct: 2 ANKTVIFKIKRQANPDT--KPVWEEFELPWKPGMNVISSLMDIALNPKTRDGKATTPITY 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E ICGSC M I+G +AC + ++ I + P V++DL VD S + Sbjct: 60 DSNCLEEICGSCAMLINGKARMACSALVDKLEQPIKLEPFSKFPVVRDLSVDRSVLFENL 119 Query: 137 RSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 ++++ W+ S E+++ L C+ C CC +CP + N+ ++G A Sbjct: 120 KAVKAWVPIDGTYDLGSGPRLSPEEQEVAYPLSNCISCCCCMEACPQFNENTG-FVGAAA 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + Q + + + ERL L + C NC + CPK + K+I+ + + Sbjct: 179 ISQVRLFNQHPTGKMLKTERLHALMGDGGIQECGYAQNCVEVCPKDIPLTKSISSVGGQV 238 Query: 255 LDRKI 259 + + I Sbjct: 239 MKQAI 243 >gi|332292157|ref|YP_004430766.1| ferredoxin [Krokinobacter diaphorus 4H-3-7-5] gi|332170243|gb|AEE19498.1| ferredoxin [Krokinobacter diaphorus 4H-3-7-5] Length = 248 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 87/260 (33%), Gaps = 35/260 (13%) Query: 16 KIWNAPTG--EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W + ++ Y I + D MD + ++ D Sbjct: 6 KVWRQKNATAKGSIVTYPIDGIDGDMSFLEMMDVLN--------------NKLISEGDEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 +T CREGICGSC M I+G C M+ K + P VIK Sbjct: 52 VTFDHDCREGICGSCSMFINGEAHGPDRLVTTCQLHMRKFKDGDTITIEPFRAAGFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD S F + + + + A + E+ C+ C C SC Sbjct: 112 DLMVDRSAFDRIQHAGGFISVNTSGNTQDANSIPIEKENADDAFAAATCIGCGACVASCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 NS L + + L E L+ + D C C CPK Sbjct: 172 ----NSSAMLFVGAKVSQFALLPQGEVEATTRVLNMVKQMDEEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L + Sbjct: 228 GISL-ENIARMNREYLSASL 246 >gi|107770481|gb|ABF83897.1| succinate dehydrogenase [Mangifera indica] Length = 159 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 S V K+ +G LK+++IYRWNPD P + Y ++L +CGPMVLD L+ IKN+ Sbjct: 29 SEVDAQKVEPKASGGTKLKKFQIYRWNPDRPSKPQLQEYEINLKDCGPMVLDALIKIKNE 88 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 IDP+LT RRSCREGICGSC MNIDG N LAC+ + G + + PLPHM VIKDLVVDM Sbjct: 89 IDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISS-GGELTITPLPHMYVIKDLVVDM 147 Query: 130 SHFYSQHRSIEP 141 ++FY+Q++SIEP Sbjct: 148 TNFYNQYKSIEP 159 >gi|302866636|ref|YP_003835273.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora aurantiaca ATCC 27029] gi|315503044|ref|YP_004081931.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. L5] gi|302569495|gb|ADL45697.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora aurantiaca ATCC 27029] gi|315409663|gb|ADU07780.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Micromonospora sp. L5] Length = 250 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 83/257 (32%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW P + + Y + +PD +D L G + Sbjct: 6 RIWRQTGPEDKGRMVTYPVQDVSPDMSFLEMLDVLNERLILDG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G AC M+ + P V+K Sbjct: 52 VAFDHDCREGICGMCSLMINGEAHGPQRGTTACQLHMRQFSDGDTIDIEPWRARAFPVVK 111 Query: 124 DLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVV+ + F + T S A + D C+ C C +CP Sbjct: 112 DLVVNRNAFDQIIAAGGYVTAPTGSAPEAHSVPVPKADADAAFESAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E + ++ D C I C +CPKG Sbjct: 171 ---NGSGMLFTAAKITQLSLLPQGQPERYTRVIGMVDAHDEAGFGGCTNIGECAAACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + P I ++ L Sbjct: 228 I-PLNTIGRLNRDYLKA 243 >gi|308174540|ref|YP_003921245.1| succinate dehydrogenase iron-sulfur protein [Bacillus amyloliquefaciens DSM 7] gi|307607404|emb|CBI43775.1| succinate dehydrogenase (iron-sulfur protein) [Bacillus amyloliquefaciens DSM 7] gi|328554462|gb|AEB24954.1| succinate dehydrogenase iron-sulfur subunit [Bacillus amyloliquefaciens TA208] gi|328912866|gb|AEB64462.1| succinate dehydrogenase (iron-sulfur protein) [Bacillus amyloliquefaciens LL3] Length = 252 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWN-PDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTL 76 + + I R + P+ P + + ++ + + + + K + + Sbjct: 2 SEKKIRFIITRQDTPE--SAPYDEEFEINYRPNLNVISALMEIRRNPVNAKGEKTTPVAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S + Sbjct: 60 DMNCLEEVCGACSMVINGRPRQSCTALVDKLEQPIRLKPMKTFPVVRDLQVDRSRMFDSL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + +++GPA Sbjct: 120 KKVKAWVPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVN-SKSKFMGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + ERL+ L L C NC QSCPKG+ +IA + Sbjct: 179 MSQVRLFNAHPTGAMNKSERLEALMTDGGLGDCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|213417359|ref|ZP_03350501.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 163 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 76/160 (47%), Positives = 104/160 (65%), Gaps = 4/160 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LK 144 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+ L Sbjct: 64 GLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 PA+E LQ E R+K+DGLYEC++CACCSTSCPS+W Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFW 163 >gi|103413|pir||C32394 succinate dehydrogenase (ubiquinone) (EC 1.3.5.1) 27K iron-sulfur protein - fruit fly (Drosophila melanogaster) (fragment) Length = 142 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 88/142 (61%), Positives = 113/142 (79%), Gaps = 2/142 (1%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPA 151 G NTLA + ++ +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK + Sbjct: 1 GGNTLASPEIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGK 60 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ L+S E+R+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRD+F Sbjct: 61 QQYLESIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFT 120 Query: 212 GERLDNLEDPFRLYRCHTIMNC 233 ERL L+DPF LYRCHTIMNC Sbjct: 121 EERLAKLQDPFSLYRCHTIMNC 142 >gi|88597036|ref|ZP_01100272.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|218562096|ref|YP_002343875.1| putative succinate dehydrogenase iron-sulfur protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190725|gb|EAQ94698.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359802|emb|CAL34588.1| putative succinate dehydrogenase iron-sulfur protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315928234|gb|EFV07551.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 321 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + + Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHVW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|315929265|gb|EFV08480.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Campylobacter jejuni subsp. jejuni 305] Length = 303 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDL-DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N +Y +D D G +L LL+IK D TL SC+ ICG+ Sbjct: 2 KIIIDRFN---GKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+D +I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + A++ QS E+ +I ++C++C C++ C +S Y+ P + + Sbjct: 119 AMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHVW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + + L+ C C CPKG++ IA +++M + + + Sbjct: 179 RAAADSRGKDPMLHVKP-SVMNGLWLCVHCQECADRCPKGISSVSDIANLRVMAIKKGL 236 >gi|190899172|gb|ACE98099.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899178|gb|ACE98102.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899208|gb|ACE98117.1| 2Fe-2S ferredoxin [Populus tremula] Length = 160 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 79/132 (59%), Positives = 98/132 (74%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 TNPTKPQHLKTFQIYRWNPDNPTKPELQNYEIDLNKCGPMVLDALIKIKNEIDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 84 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 143 Query: 139 IEPWLKTVSPKP 150 IEPWLK +P P Sbjct: 144 IEPWLKRKNPPP 155 >gi|190899164|gb|ACE98095.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899166|gb|ACE98096.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899170|gb|ACE98098.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899174|gb|ACE98100.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899180|gb|ACE98103.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899182|gb|ACE98104.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899186|gb|ACE98106.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899188|gb|ACE98107.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899190|gb|ACE98108.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899192|gb|ACE98109.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899196|gb|ACE98111.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899198|gb|ACE98112.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899200|gb|ACE98113.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899202|gb|ACE98114.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899204|gb|ACE98115.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899206|gb|ACE98116.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899210|gb|ACE98118.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899212|gb|ACE98119.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899214|gb|ACE98120.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899216|gb|ACE98121.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899218|gb|ACE98122.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899220|gb|ACE98123.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899222|gb|ACE98124.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899224|gb|ACE98125.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899226|gb|ACE98126.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899230|gb|ACE98128.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899232|gb|ACE98129.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899234|gb|ACE98130.1| 2Fe-2S ferredoxin [Populus tremula] Length = 160 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 79/132 (59%), Positives = 98/132 (74%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 TNPTKPQHLKTFQIYRWNPDNPTKPELQNYEIDLNKCGPMVLDALIKIKNEIDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 84 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 143 Query: 139 IEPWLKTVSPKP 150 IEPWLK +P P Sbjct: 144 IEPWLKRKNPPP 155 >gi|138896236|ref|YP_001126689.1| succinate dehydrogenase iron-sulfur subunit [Geobacillus thermodenitrificans NG80-2] gi|196250194|ref|ZP_03148888.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. G11MC16] gi|134267749|gb|ABO67944.1| Iron-sulphur subunit of succinate dehydrogenasesubunit [Geobacillus thermodenitrificans NG80-2] gi|196210378|gb|EDY05143.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. G11MC16] Length = 253 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 E + I R + P + + + + + K + + Sbjct: 2 SENKTVRFIITRQDR-PDSAPYEEEFVIPYRPNMNVISALMEIRRNPVNAKGEKTTPVVW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ VI+DL +D S + Sbjct: 61 EMNCLEEVCGACSMVINGKPRQACAALIDQLEQPIRLEPMRTFPVIRDLAIDRSRMFDAL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 121 KRVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSN-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL + L C NC QSCPKG+ +IA + Sbjct: 180 LSQVRLFNAHPTGAMHKAERLRTIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 238 >gi|116181528|ref|XP_001220613.1| succinate dehydrogenase, ubiquinone, iron-sulfur protein, mitochondrial precursor [Chaetomium globosum CBS 148.51] gi|88185689|gb|EAQ93157.1| succinate dehydrogenase, ubiquinone, iron-sulfur protein, mitochondrial precursor [Chaetomium globosum CBS 148.51] Length = 246 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 12/151 (7%) Query: 1 MVEIMLPKRSRVKRGKIWNAPT--GEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGP 57 M + V G+ + LK ++IYRWNPD P M +Y +DL+ GP Sbjct: 33 MAQ--------VVDGQQQSQSASGDAAKLKTFQIYRWNPDTPTEKPKMQSYTLDLNKTGP 84 Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPL 116 MVLD L+ IKN++DPTLT RRSCREGICGSC MNI+GTNTLAC + + + +YPL Sbjct: 85 MVLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPAEDSAELKIYPL 144 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 PH V+KDLV D++ FY Q++SI+P+L+ + Sbjct: 145 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRDT 175 >gi|190899228|gb|ACE98127.1| 2Fe-2S ferredoxin [Populus tremula] Length = 160 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 79/132 (59%), Positives = 98/132 (74%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 TNPTKPQHLKTFQIYRWNPDNPTKPELQNYEIDLNKCGPMVLDALIKIKNEIDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 84 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 143 Query: 139 IEPWLKTVSPKP 150 IEPWLK +P P Sbjct: 144 IEPWLKRKNPPP 155 >gi|112797717|gb|ABI22182.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D +G + + PL + + +D+VVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYRGYMRIEPLANFPIERDVVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|311744664|ref|ZP_07718461.1| fumarate reductase subunit B [Aeromicrobium marinum DSM 15272] gi|311311973|gb|EFQ81893.1| fumarate reductase subunit B [Aeromicrobium marinum DSM 15272] Length = 249 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 86/244 (35%), Gaps = 22/244 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREG 83 ++R + M Y +D + L+ L + ++ + CREG Sbjct: 3 ITVNVWRQK-NASVAGEMVAYPLDDVSEDMSFLEMLDVLNEQLTIEGHDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-------IAVYPLPH--MSVIKDLVVDMSHFYS 134 ICGSCG+ I+G V + + + P V+KDLVVD F Sbjct: 62 ICGSCGVVINGIPHGPEVTTTCQLHMRSFSDGDVLDIEPWRAGAFPVVKDLVVDRGSFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A ++ C+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGSAPEANATPVPKDNADHAFEAATCIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L + E L +E D C I CT +CPKG+ P I+++ Sbjct: 178 AAKITHLGLLPQGQAERDSRVLGMVEQHDAEGFGGCTNIGECTAACPKGI-PLDVISQLN 236 Query: 252 MMLL 255 LL Sbjct: 237 RDLL 240 >gi|330466776|ref|YP_004404519.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Verrucosispora maris AB-18-032] gi|328809747|gb|AEB43919.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Verrucosispora maris AB-18-032] Length = 252 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 86/246 (34%), Gaps = 23/246 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R + M TY V+ + L+ L + ++ + + CREGI Sbjct: 4 TLRIWRQSGPAD-KGRMVTYQVEDVSPDMSFLEMLDVLNERLILAGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG CG+ I+G AC M+ K + P VIKDLVV+ + F Sbjct: 63 CGMCGLMINGNAHGPQRGTTACQLHMRQFKDGDTIDIEPWRARAFPVIKDLVVNRNAFDK 122 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T S A + + + C+ C C +CP N L Sbjct: 123 IIAAGGYITAPTGSAPEAHSVPVAKANADAAFESAACIGCGACVAACP----NGSGMLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L + E + L+ D C CT CPKG+ I ++ Sbjct: 179 AAKVTQLGLLPQGQPERYTRVIGMLDAHDEAGFGGCTNAGECTAVCPKGIPLTT-IGRLN 237 Query: 252 MMLLDR 257 L Sbjct: 238 RDYLAA 243 >gi|296170576|ref|ZP_06852160.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894808|gb|EFG74533.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 248 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 13/235 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R++R + + + V ++ G +VLD + ++ P L +R +C+ G CGSC Sbjct: 7 IRVWRGDEQGGE---LRDFTVAVN-EGEVVLDVIHRLQATQVPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+ M + V P+ V++DLV D+S Y + R I + Sbjct: 63 AEINGYPKLMCMTRMSTFAEDEVVTVTPMRAFPVLRDLVTDVSFNYEKAREIPSFAPPKD 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLI 204 + + D Q+ +C+ C C C + D Y GP + ++ + Sbjct: 123 -LRPGDYRMAQADVQRSQEFRKCIECFLCQDVCHVIRDHEDNKRAYAGPRMFIRLAELEM 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R D ++ L C+ CT+ CP+ + AI +K + RK Sbjct: 182 HPLD--TADRRDLAQNQQGLGLCNITKCCTEVCPEHIKITDNAIIPMKERVAGRK 234 >gi|282862785|ref|ZP_06271846.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces sp. ACTE] gi|282562471|gb|EFB68012.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces sp. ACTE] Length = 248 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N + G M TY VD + L+ L + ++ D + CREG Sbjct: 4 TLRVWRQQNAETPGA--MATYEVDRISQDMSFLEMLDTLNEELILAGDEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYVSAPTGTAPDAHATPVPKPDADFAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +IA + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVATMDDEGFGGCTLTGECATACPKGIPLP-SIAAMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|72162850|ref|YP_290507.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Thermobifida fusca YX] gi|71916582|gb|AAZ56484.1| succinate dehydrogenase subunit B [Thermobifida fusca YX] Length = 248 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 89/246 (36%), Gaps = 22/246 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R M TY +D N L+ L + K+ + + CREG Sbjct: 3 ITLRVWRQK-SRDDEGRMVTYELDDVNENMSFLEMLDVLNEKLTLQGEDPIAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+CG+ I+G C M+ K + P VIKDLVVD S F Sbjct: 62 ICGACGVVINGVAHGPEVTTTCQLHMRSFKDGDVIEVEPWRAKAFPVIKDLVVDRSAFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A + D + C+ C C +CP N+ L Sbjct: 122 IIQAGGYISAPTGTAPDAHSVPVPKADADRAFDAATCIGCGACVAACP----NASAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L + E + + D C I C CPKG+ P I+++ Sbjct: 178 AAKITHLGMLPQGQPERASRVVKMVNQHDEEGFGGCTNIGECAAVCPKGI-PLDTISQLN 236 Query: 252 MMLLDR 257 LL Sbjct: 237 NDLLSA 242 >gi|126662596|ref|ZP_01733595.1| succinate dehydrogenase [Flavobacteria bacterium BAL38] gi|126625975|gb|EAZ96664.1| succinate dehydrogenase [Flavobacteria bacterium BAL38] Length = 253 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 25/257 (9%) Query: 22 TGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTL 76 + KN+ +I+R + M+TY +D + L+ L + ++ + Sbjct: 2 SASKNININLKIWRQK-NAGSKGSMETYKLDNVSTASSFLEMLDQLNEQLINERKEPVAF 60 Query: 77 RRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLV 126 CREGICGSC + I+G C M+ ++ P VIKDLV Sbjct: 61 DHDCREGICGSCSLYINGRAHGPDTGITTCQLHMRMFNDGDTIFIEPWRSKAFPVIKDLV 120 Query: 127 VDMSHFYS--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 VD + F Q + + A + +D K C+ C C +C Sbjct: 121 VDRTAFDRIQQAGGFVSVNTSGNTIDANSIPVPKDDADKAFEAAACIGCGACVATCK--- 177 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLN 242 N L + Y L + E ++ + D C C CPKG++ Sbjct: 178 -NGSAMLFVGAKVSQYALLPQGKVEATQRVMNMVRQMDEEGFGNCTNTGACEIECPKGIS 236 Query: 243 PAKAIAKIKMMLLDRKI 259 + IA++ L + Sbjct: 237 L-ENIARMNREFLKASV 252 >gi|255659142|ref|ZP_05404551.1| succinate dehydrogenase, iron-sulfur protein [Mitsuokella multacida DSM 20544] gi|260848590|gb|EEX68597.1| succinate dehydrogenase, iron-sulfur protein [Mitsuokella multacida DSM 20544] Length = 250 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 12/246 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTLT 75 E+ + R + K P + +D G ++ L+ I+ P +T Sbjct: 2 AEQKKVRIIVERQD-GPKEKPYNQEFEIDY-RPGLNIVAALMEIQKNPVTVDGKKVPPVT 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G AC + +K I + P VI+DL++D S + Sbjct: 60 WECNCLEKVCGACMMVINGKARQACCTLVDTLKQPIHLQPARTFPVIRDLLIDRSVMFES 119 Query: 136 HRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + I W++ K+ Q+ Q + C+ C CC +CP+ SD ++GPA Sbjct: 120 LKRIHGWVEVDGTWEVKDAPIQNPYTAQTAYEISHCMTCGCCLEACPNVGPQSD-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +QAY + + +F +RL+ L + + C NC ++CPK + +A++ Sbjct: 179 PTVQAYLFNLHPLGKFDAPKRLNALMEKGGITSCGNSQNCVEACPKNIKLTTYLAQLNRD 238 Query: 254 LLDRKI 259 + + + Sbjct: 239 VNKQAL 244 >gi|261067|gb|AAB24366.1| succinate-ubiquinone oxidoreductase complex II iron-sulfur subunit [Caenorhabditis elegans] Length = 161 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 94/161 (58%), Positives = 124/161 (77%), Gaps = 3/161 (1%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREG+CGSC MNI G NTLAC K D + +YPLPHM V+KDLV DM+ FY+Q+ S Sbjct: 1 CREGMCGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYAS 60 Query: 139 IEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I+PW++ +P K++ QS +R ++DGLYEC++CACCSTSCPSYWWN+D+YLGPA+L Sbjct: 61 IQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVL 120 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +QAYRW+IDSRD++ ERL + D F ++CHT+MNCT+ C Sbjct: 121 MQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTMMNCTRIC 161 >gi|15607388|ref|NP_214761.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis H37Rv] gi|15839628|ref|NP_334665.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis CDC1551] gi|31791425|ref|NP_853918.1| fumarate reductase iron-sulfur subunit [Mycobacterium bovis AF2122/97] gi|121636160|ref|YP_976383.1| fumarate reductase iron-sulfur subunit [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660012|ref|YP_001281535.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis H37Ra] gi|148821441|ref|YP_001286195.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis F11] gi|167968969|ref|ZP_02551246.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis H37Ra] gi|215406245|ref|ZP_03418426.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis 02_1987] gi|215409737|ref|ZP_03418545.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis 94_M4241A] gi|215425463|ref|ZP_03423382.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T92] gi|215433167|ref|ZP_03431086.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis EAS054] gi|215448534|ref|ZP_03435286.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T85] gi|218755988|ref|ZP_03534784.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis GM 1503] gi|219556046|ref|ZP_03535122.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T17] gi|224988633|ref|YP_002643320.1| fumarate reductase iron-sulfur subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|253797171|ref|YP_003030172.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 1435] gi|254233625|ref|ZP_04926951.1| hypothetical protein TBCG_00246 [Mycobacterium tuberculosis C] gi|254366693|ref|ZP_04982737.1| hypothetical succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) [Mycobacterium tuberculosis str. Haarlem] gi|254549188|ref|ZP_05139635.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185111|ref|ZP_05762585.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis CPHL_A] gi|260199245|ref|ZP_05766736.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T46] gi|260203391|ref|ZP_05770882.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis K85] gi|289441624|ref|ZP_06431368.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T46] gi|289445780|ref|ZP_06435524.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis CPHL_A] gi|289552500|ref|ZP_06441710.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 605] gi|289568151|ref|ZP_06448378.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T17] gi|289572826|ref|ZP_06453053.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis K85] gi|289748017|ref|ZP_06507395.1| succinate dehydrogenase [Mycobacterium tuberculosis 02_1987] gi|289748730|ref|ZP_06508108.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T92] gi|289756313|ref|ZP_06515691.1| succinate dehydrogenase [Mycobacterium tuberculosis EAS054] gi|289760353|ref|ZP_06519731.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T85] gi|289764364|ref|ZP_06523742.1| succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) [Mycobacterium tuberculosis GM 1503] gi|294994722|ref|ZP_06800413.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis 210] gi|297632728|ref|ZP_06950508.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis KZN 4207] gi|297729702|ref|ZP_06958820.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis KZN R506] gi|298523715|ref|ZP_07011124.1| succinate dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|306774338|ref|ZP_07412675.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu001] gi|306779080|ref|ZP_07417417.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu002] gi|306782869|ref|ZP_07421191.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu003] gi|306787237|ref|ZP_07425559.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu004] gi|306791793|ref|ZP_07430095.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu005] gi|306795835|ref|ZP_07434137.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu006] gi|306801833|ref|ZP_07438501.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu008] gi|306806044|ref|ZP_07442712.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu007] gi|306970440|ref|ZP_07483101.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu009] gi|306974671|ref|ZP_07487332.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu010] gi|307082380|ref|ZP_07491550.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu011] gi|307082723|ref|ZP_07491836.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu012] gi|313657028|ref|ZP_07813908.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis KZN V2475] gi|2909451|emb|CAA17339.1| PROBABLE SUCCINATE DEHYDROGENASE [IRON-SULFUR SUBUNIT] (SUCCINIC DEHYDROGENASE) [Mycobacterium tuberculosis H37Rv] gi|13879746|gb|AAK44479.1| ferredoxin, 2Fe-2S [Mycobacterium tuberculosis CDC1551] gi|31617010|emb|CAD93117.1| PROBABLE SUCCINATE DEHYDROGENASE [IRON-SULFUR SUBUNIT] (SUCCINIC DEHYDROGENASE) [Mycobacterium bovis AF2122/97] gi|121491807|emb|CAL70269.1| Probable succinate dehydrogenase [iron-sulfur subunit] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603418|gb|EAY61693.1| hypothetical protein TBCG_00246 [Mycobacterium tuberculosis C] gi|134152205|gb|EBA44250.1| hypothetical succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) [Mycobacterium tuberculosis str. Haarlem] gi|148504164|gb|ABQ71973.1| succinate dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148719968|gb|ABR04593.1| hypothetical succinate dehydrogenase iron-sulfur subunit (succinic dehydrogenase) [Mycobacterium tuberculosis F11] gi|224771746|dbj|BAH24552.1| fumarate reductase iron-sulfur subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|253318674|gb|ACT23277.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 1435] gi|289414543|gb|EFD11783.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T46] gi|289418738|gb|EFD15939.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis CPHL_A] gi|289437132|gb|EFD19625.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 605] gi|289537257|gb|EFD41835.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis K85] gi|289541904|gb|EFD45553.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T17] gi|289688545|gb|EFD56033.1| succinate dehydrogenase [Mycobacterium tuberculosis 02_1987] gi|289689317|gb|EFD56746.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T92] gi|289696900|gb|EFD64329.1| succinate dehydrogenase [Mycobacterium tuberculosis EAS054] gi|289711870|gb|EFD75886.1| succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) [Mycobacterium tuberculosis GM 1503] gi|289715917|gb|EFD79929.1| fumarate reductase iron-sulfur subunit [Mycobacterium tuberculosis T85] gi|298493509|gb|EFI28803.1| succinate dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|308217170|gb|EFO76569.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu001] gi|308327929|gb|EFP16780.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu002] gi|308332388|gb|EFP21239.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu003] gi|308336139|gb|EFP24990.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu004] gi|308339771|gb|EFP28622.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu005] gi|308343776|gb|EFP32627.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu006] gi|308347496|gb|EFP36347.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu007] gi|308351395|gb|EFP40246.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu008] gi|308352123|gb|EFP40974.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu009] gi|308356073|gb|EFP44924.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu010] gi|308360028|gb|EFP48879.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu011] gi|308367593|gb|EFP56444.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis SUMu012] gi|323717238|gb|EGB26447.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis CDC1551A] gi|326906003|gb|EGE52936.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis W-148] gi|328456958|gb|AEB02381.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis KZN 4207] Length = 248 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 13/234 (5%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 R++R + + + + V+++ G +VLD +L ++ P L +R +C+ G CGSC Sbjct: 8 RVWRGD---ESCGELREFTVEVN-EGEVVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSA 63 Query: 91 NIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 I+G L C+ M + V P+ VI+DLV D+S Y + R I + Sbjct: 64 EINGKPRLMCMTRMSTFDEDEIVTVTPMRTFPVIRDLVTDVSFNYQKAREIPSFAPPK-E 122 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLID 205 E + D + +C+ C C C + N D + GP L++ + Sbjct: 123 LQPSEYRMAQVDVARSQEFRKCIECFLCQNVCHVVRDHEENKDAFAGPRFLMRIAELEMH 182 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D +R ++ L C+ CT+ CP+ + A+ +K + DRK Sbjct: 183 PLD--TRDRRSQAQEEHGLGYCNITKCCTEVCPENIKITDNALIPMKERVADRK 234 >gi|297562850|ref|YP_003681824.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847298|gb|ADH69318.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 248 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 86/254 (33%), Gaps = 33/254 (12%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W P E L Y++ +PD +D L + + Sbjct: 6 RVWRQKGPDDEGRLATYKLTDVSPDMSFLEMLDVLNEKLTL--------------ENEDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 + CREGICG+CG+ IDG C M+ + P V++D Sbjct: 52 VAFDHDCREGICGACGVVIDGEAHGPERTTTCQLHMRSFNDGDTITVEPWRAKAFPVVRD 111 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD F ++ T + A D + C+ C C +CP Sbjct: 112 LVVDRGAFDRIIQAGGYISAPTGTAPDAHANPIPKPDADRAFDAATCIGCGACVAACP-- 169 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGL 241 N+ L A + L + E + + D C I C CPKG+ Sbjct: 170 --NASSMLFTAAKVTHLGMLPQGQPERASRVVKMINQQDEEDFGGCTNIGECAAVCPKGI 227 Query: 242 NPAKAIAKIKMMLL 255 P I+++ LL Sbjct: 228 -PLDTISQLNRDLL 240 >gi|89897853|ref|YP_514963.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila felis Fe/C-56] gi|89331225|dbj|BAE80818.1| subunit of succinate dehydrogenase [Chlamydophila felis Fe/C-56] Length = 263 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTLRRSCRE 82 +IYR P G +++ + L + G V+ L+ I+ + + + C E Sbjct: 9 LKIYRGTP---GKQYWESFELAL-HPGENVISALMEIEKRPVNTLGETVNPVVWEQGCLE 64 Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +CGSC + ++G AC +++ I + PL +I+DL+VD S + + Sbjct: 65 EVCGSCSLLVNGVPRQACTALIEEYIKKTGSREIILAPLTKFPLIRDLIVDRSIMFDNLQ 124 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I+ W+ + + S E+++ + L C+ C CC+ +CP ++D ++GP + Sbjct: 125 KIQGWVAADTDGENNGVKVSQEEQELMYALSMCMTCGCCTEACPQINEHND-FIGPVAIA 183 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Q+ + D+ +RL L + C NC + CPK L ++I+ + + Sbjct: 184 QSRLFNTYPGDKQSKKRLLTLMGNKGIEGCGQAHNCERVCPKKLPLTESISAMGRDVAKY 243 Query: 258 KI 259 + Sbjct: 244 SL 245 >gi|15835494|ref|NP_297253.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia muridarum Nigg] gi|270285677|ref|ZP_06195071.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia muridarum Nigg] gi|301337072|ref|ZP_07225274.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia muridarum MopnTet14] gi|7190908|gb|AAF39676.1| succinate dehydrogenase, iron-sulfur protein [Chlamydia muridarum Nigg] Length = 265 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 13/230 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLRRSCREG 83 IYR P G +++ ++L + + + + + ++C E Sbjct: 7 LNIYRGVP---GKQYWESFELELHPGENVISALMEIEKNPINTQGERVDPVVWEQACLEE 63 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 +CGSC M ++G AC + + K I + PL +++DL+VD S + I+ Sbjct: 64 VCGSCAMLVNGVPRQACTVLIHEHMDAKREIKLAPLSKFPLVRDLIVDRSVMFKNLEEIQ 123 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W+ S E++ + L C+ C CC+ +CP SD ++GPA + QA Sbjct: 124 GWISADKCGEGPGPQVSQEEQALMYSLSMCMTCGCCTEACPQVNEKSD-FMGPAAIAQAR 182 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + ++ + RL L + C NC + CPK L ++I+ + Sbjct: 183 YFNSYPGEKRRESRLRALMGNRGIEGCGQAHNCVRVCPKKLPLTESISAM 232 >gi|297583702|ref|YP_003699482.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus selenitireducens MLS10] gi|297142159|gb|ADH98916.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus selenitireducens MLS10] Length = 254 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 13/240 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL-------TL 76 + I R + + P + + + V+ L+ I+ L Sbjct: 2 SEKTISLIIKRQE-NQESAPYEEKFEIPY-RSNMNVISALMEIRRNPKNALGKDTTAVAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 SC E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + Sbjct: 60 DASCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDSL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ + ++GPA Sbjct: 120 KRVKAWVPIDGTHDLGSGPRMPEAKRQWAYELSKCMTCGVCLQACPNVN-SKSPFIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q + + ERL L D L C NC ++CPK + +IA + Sbjct: 179 ISQVRLFNAHPTGAMHKAERLQTLMDGEGGLSNCGNSQNCVEACPKEIPLTTSIAALNRE 238 >gi|150024208|ref|YP_001295034.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacterium psychrophilum JIP02/86] gi|149770749|emb|CAL42213.1| Succinate dehydrogenase, iron-sulfur protein [Flavobacterium psychrophilum JIP02/86] Length = 254 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 90/257 (35%), Gaps = 25/257 (9%) Query: 22 TGEKNL-KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTL 76 + KN+ +I+R + K M+TY +D + L+ L + ++ + Sbjct: 2 SAAKNININLKIWRQK-NAKAKGSMETYKLDNVSTASSFLEMLDQLNEELVNEKKEPVAF 60 Query: 77 RRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLV 126 CREGICG C + I+G C M+ ++ P V+KDLV Sbjct: 61 DHDCREGICGMCSLYINGRAHGPDTGTTTCQLHMRKFNDGDTIFIEPWRSKAFPVVKDLV 120 Query: 127 VDMSHFYS--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 VD S F Q + + A D K C+ C C SC Sbjct: 121 VDRSSFDRIQQAGGFVSVNTSGNTIDANATPIKKGDADKSFEAAACIGCGACVASCK--- 177 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLN 242 N L + Y L + E L+ + D C C CPKG++ Sbjct: 178 -NGSAMLFVGAKVSQYALLPQGKVEATERVLNMVRQMDEEGFGNCTNTGACEVECPKGIS 236 Query: 243 PAKAIAKIKMMLLDRKI 259 + IA++ L + Sbjct: 237 L-ENIARMNREYLSASL 252 >gi|212638428|ref|YP_002314948.1| succinate dehydrogenase iron-sulfur subunit [Anoxybacillus flavithermus WK1] gi|212559908|gb|ACJ32963.1| Succinate dehydrogenase, Fe-S protein subunit [Anoxybacillus flavithermus WK1] Length = 253 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 12/241 (4%) Query: 23 GEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMV------LDGLLYIKNKIDPTLT 75 E + R + PD P + + + ++ + K + + Sbjct: 2 SENKTIRIIVTRQDRPDT--APYEEEFVIPYRPNMNIISALMEIRRNPVNAKGEKTTPVA 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + Sbjct: 60 WEMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPMRTFPVIRDLQVDRSRMFDS 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ W+ + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 120 LKKVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSN-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL+ + L C NC QSCPKG+ +IA + Sbjct: 179 PLSQVRLFNAHPTGAMHKAERLEAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRA 238 Query: 254 L 254 Sbjct: 239 A 239 >gi|62185536|ref|YP_220321.1| succinate dehydrogenase iron-sulfur subunit [Chlamydophila abortus S26/3] gi|62148603|emb|CAH64375.1| succinate dehydrogenase iron-sulfur protein [Chlamydophila abortus S26/3] Length = 263 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KIDPTLTLRRSCRE 82 +IYR P G +++ + L + G V+ L+ I+ + + + C E Sbjct: 9 LKIYRGTP---GKQYWESFELTL-HPGENVISALMEIEKRPVNTLGETVNPVVWEQGCLE 64 Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +CGSC + ++G AC +++ I + PL +I+DL+VD S + + Sbjct: 65 EVCGSCSLLVNGIPRQACTALIEEYIKETGSREIVLAPLTKFPLIRDLIVDRSIMFDNLQ 124 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I+ W+ + S ++++ + L C+ C CC+ +CP ++D ++GPA + Sbjct: 125 KIQGWVAADIDGEHNGVKVSQKEQELMYALSMCMTCGCCTEACPQINEHND-FIGPAAIA 183 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 QA + D+ +RL L + C NC + CPK L ++I+ + + Sbjct: 184 QARLFNTYPGDKQSKKRLRTLMGKKGIEGCGQAHNCVRVCPKKLPLTESISAMGKEISKY 243 Query: 258 KI 259 + Sbjct: 244 SL 245 >gi|56421206|ref|YP_148524.1| succinate dehydrogenase iron-sulfur subunit [Geobacillus kaustophilus HTA426] gi|261418313|ref|YP_003251995.1| succinate dehydrogenase iron-sulfur subunit [Geobacillus sp. Y412MC61] gi|297529167|ref|YP_003670442.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. C56-T3] gi|319767727|ref|YP_004133228.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. Y412MC52] gi|56381048|dbj|BAD76956.1| succinate dehydrogenase (iron-sulfur protein) [Geobacillus kaustophilus HTA426] gi|261374770|gb|ACX77513.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. Y412MC61] gi|297252419|gb|ADI25865.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. C56-T3] gi|317112593|gb|ADU95085.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Geobacillus sp. Y412MC52] Length = 253 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 10/239 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTL 76 E I R + P + + + + + K + + Sbjct: 2 SENKTVRLIITRQDR-PDSAPYEEEFVIPYRPNMNVISALMEIRRNPVNAKGEKTTPVAW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P+ VI+DLV+D S + Sbjct: 61 EMNCLEEVCGACSMVINGKPRQACAALIDKLEQPIRLEPMRTFPVIRDLVIDRSRMFDAL 120 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C +CP+ S+ ++GPA Sbjct: 121 KRVKAWIPIDGTYDLGPGPRMPERKRQWAYELSKCMTCGVCLEACPNVNSKSN-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + + ERL + L C NC QSCPKG+ +IA + Sbjct: 180 LSQVRLFNAHPTGAMHKAERLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRE 238 >gi|319955996|ref|YP_004167259.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitratifractor salsuginis DSM 16511] gi|319418400|gb|ADV45510.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Nitratifractor salsuginis DSM 16511] Length = 261 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 20/241 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R+ + D + + +L L IK K+DPTLT CR G+CG+C Sbjct: 2 KLTIQRFQEGQSRDEVFDIASLKVT----TLLSALYEIKAKLDPTLTFLAGCRSGVCGAC 57 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G LAC K + PL + V++DL VD S + I P L S Sbjct: 58 AVRVNGREKLACSYIPK---DGDRIEPLQYHPVLRDLKVDKSKAQETLKPILPHLSQRST 114 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR- 207 A+ + E+ + +C++C C ++CP Y N D +LGP L +A+R L D+R Sbjct: 115 LNAQHSVSPEEEAKYRLQ-TDCILCDSCYSACPVYAVNPD-FLGPFALTRAWRHLSDTRW 172 Query: 208 --------DEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +R LE ++ C CT CP+ ++P I +++ L Sbjct: 173 QESSTSQISTLNAQRSTLLEKIQKNGIWDCTLCGECTAVCPQHIDPKGDIMQLRGESLKA 232 Query: 258 K 258 Sbjct: 233 G 233 >gi|219851068|ref|YP_002465500.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanosphaerula palustris E1-9c] gi|219545327|gb|ACL15777.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanosphaerula palustris E1-9c] Length = 490 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R +P P Y ++++ G VL L I ++IDPTL+ R C G CGSC Sbjct: 5 TITVFRQDPAKGEEPRYVPYTIEVN-EGARVLHLLHAIHDQIDPTLSYRYCCSSGQCGSC 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + +DG LAC + + I + PL + + KDL+VD+ + Sbjct: 64 AVRVDGKPVLACTAEAR---DGITIEPL-ALPLKKDLMVDLVPLLADL--------PPLV 111 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + ++ + + I L C+ C C + CP+ +LGP ++ Q R +DSRD Sbjct: 112 PGPESVMVTKRAVEAIRPLSTCIGCLACVSICPAMKVTD--FLGPTVMRQEMRLALDSRD 169 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 L+ C + C + CPK + P KAI K++ + + + Sbjct: 170 TCDRATRAVA---EGLFTCTSCQACWEVCPKEIRIPGKAIEKLRSLANKQGL 218 >gi|254231780|ref|ZP_04925107.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis C] gi|124600839|gb|EAY59849.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium tuberculosis C] Length = 198 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 5/190 (2%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTN 96 P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM I+G Sbjct: 10 PEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGMTINGDP 68 Query: 97 TLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW P E Sbjct: 69 KLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEPPVEDGE 128 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 Q+ + C+ C C ++CP Y + D +LGPA + R+ +DSRD+ + Sbjct: 129 YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSRDQGAAD 187 Query: 214 RLDNLEDPFR 223 R D L Sbjct: 188 RRDVLAAADG 197 >gi|112797935|gb|ABI22291.1| fumarate reductase B [Haemophilus parasuis] gi|112797939|gb|ABI22293.1| fumarate reductase B [Haemophilus parasuis] gi|307577061|gb|ADN53132.1| fumarate reductase B [Haemophilus parasuis] Length = 184 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 13/184 (7%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CR ICGSCGM ++G LAC ++D G + + L + + +DLVVD+SHF SI Sbjct: 1 CRMAICGSCGMMVNGKPKLACKTFLRDYSGYMRIESLANFPIERDLVVDLSHFIESLESI 60 Query: 140 EPWLKTVSPKPAKELLQSHEDR------------QKIDGLYECVMCACCSTSCPSYWWNS 187 +P++ + +K C+ C C +CP + N Sbjct: 61 KPYIIDNKAPELDGKPHPSAELAKSRTKQTPAQLEKYRTFSMCINCGLCYAACPQFGLNP 120 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 ++GPA L A+R+ +D+RD + ER+ + ++ C + C++ CPK + PA A+ Sbjct: 121 -EFVGPAALTLAHRYNLDNRDNGKAERMKIINGKNGVWSCTFVGYCSEVCPKHVGPASAV 179 Query: 248 AKIK 251 + K Sbjct: 180 NQGK 183 >gi|289551046|ref|YP_003471950.1| Succinate dehydrogenase iron-sulfur protein [Staphylococcus lugdunensis HKU09-01] gi|315658542|ref|ZP_07911414.1| succinate dehydrogenase [Staphylococcus lugdunensis M23590] gi|289180578|gb|ADC87823.1| Succinate dehydrogenase iron-sulfur protein [Staphylococcus lugdunensis HKU09-01] gi|315496871|gb|EFU85194.1| succinate dehydrogenase [Staphylococcus lugdunensis M23590] Length = 278 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 14/264 (5%) Query: 1 MVEIMLPKRSRVKR--GKIWNAPTGEK-NLKEYRIYRWNPDNKGNPCMDTYYVD------ 51 M E L + K P EK + I R + + P + + + Sbjct: 1 MTE-TLSANNTPKDQHADSNQQPQKEKQKTIKLIIKRQD-NQDSKPYDEAFEIPYKDNMN 58 Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI 111 + C + + + K + +C E +CG+C M I+G +C + ++ I Sbjct: 59 VIACLMEIRRNPVNAEGKKTTPVIWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPI 118 Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYEC 170 + P+ VI+DL VD + + + ++ W+ + E RQ L +C Sbjct: 119 RLEPMSTFPVIRDLQVDRTRMFDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKC 178 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHT 229 + C C CP+ +++++G + Q + + ERLD L L C Sbjct: 179 MTCGVCLEVCPNV-TPNNKFVGAQAISQVRLFDLHPTGAMTKDERLDALMGTGGLQECGN 237 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMM 253 NC +CPKG+ +IA + Sbjct: 238 SQNCVNACPKGIPLTTSIAAMNRE 261 >gi|119717775|ref|YP_924740.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Nocardioides sp. JS614] gi|119538436|gb|ABL83053.1| succinate dehydrogenase subunit B [Nocardioides sp. JS614] Length = 247 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 86/243 (35%), Gaps = 22/243 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +I+R PD M TY VD L+ L + ++ + + CREG Sbjct: 3 VTLKIWRQ-PDAASKGAMHTYEVDEVTGDMSFLEMLDVLNEQLNAKGEDPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------AIAVYPLPH--MSVIKDLVVDMSHFYS 134 ICG CG+ I+G V + I + P VIKDLVVD F Sbjct: 62 ICGMCGLMINGQAHGPEVTTTCQLHMRSFKDGDEIVIEPWRADAFPVIKDLVVDRGAFDR 121 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T S A + ED + C+ C C +CP N L Sbjct: 122 IIQAGGFISVNTGSAPEAHSVPVPREDATRAFDAATCIGCGACVAACP----NGSAALFM 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E + + D C I C +CPK + P I+++ Sbjct: 178 GAKITHLGELPQGQPERDDRVVSMVAQHDHEGFGGCTNIGECVAACPKEI-PFDVISRLN 236 Query: 252 MML 254 L Sbjct: 237 WDL 239 >gi|288818417|ref|YP_003432765.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Hydrogenobacter thermophilus TK-6] gi|288787817|dbj|BAI69564.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Hydrogenobacter thermophilus TK-6] gi|308752007|gb|ADO45490.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobacter thermophilus TK-6] Length = 237 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 6/206 (2%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV 113 +LD L+ IK +D +L+ R CR G+CG+C + ++G LAC + + + Sbjct: 25 PENATLLDMLIKIKEDMDQSLSFRSMCRAGVCGTCAIKVNGKPVLACSTKVSIFGEELTI 84 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P+ SVIKDLVVD YS+ R + W+ + + E +K++ +EC++C Sbjct: 85 EPIDQFSVIKDLVVDHEGIYSKLRLWKVWM----TSFEENIRFHQETLRKVEKSHECILC 140 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C + CP + + D + GP +L + + + D R+ + E+L L+ C MNC Sbjct: 141 GVCDSVCPVFTTSQD-FGGPLLLTRYQKLVFDPRNAERDEKLQTLKSLNP-QLCTHCMNC 198 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +CPK L P I + + +L R I Sbjct: 199 SFACPKKLMPEALIKEEENLLYQRGI 224 >gi|89893483|ref|YP_516970.1| succinate dehydrogenase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219666810|ref|YP_002457245.1| succinate dehydrogenase iron-sulfur subunit [Desulfitobacterium hafniense DCB-2] gi|89332931|dbj|BAE82526.1| fumarate reductase iron-sulfur protein [Desulfitobacterium hafniense Y51] gi|219537070|gb|ACL18809.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfitobacterium hafniense DCB-2] Length = 250 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 12/238 (5%) Query: 26 NLKEYRIYRWN-PDNKGNPCMDTYYVD------LDNCGPMVLDGLLYIKNKIDPTLTLRR 78 +I R N PD + + VD + +C + + ++ K + Sbjct: 5 KSVRLKIRRQNAPDQPA--FWEEFAVDYSPKMNIISCLMEIQKNPVNVQGKKTNPVVWEC 62 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C MNI+G AC + ++ I + PL +++DL+VD + + + Sbjct: 63 NCLEEVCGACTMNINGQARQACSALVDQLEQPIVLEPLRKFPILRDLMVDRTIMFENLKR 122 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + W+ + E DR L +C+ C CC SCP S ++GPA + Sbjct: 123 VHAWIDIDGTYDLGPGPRMAEVDRVWAYELSKCMTCGCCMESCPQVNSRSR-FIGPAAVS 181 Query: 198 QAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QA + RL L + C NC ++CPK + ++A + + Sbjct: 182 QARLFNTHPSGAMHKHIRLSALMGDGGITDCGNAQNCVRACPKEIPLTTSLADMNREV 239 >gi|254457205|ref|ZP_05070633.1| fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] gi|207085997|gb|EDZ63281.1| fumarate reductase iron-sulfur protein [Campylobacterales bacterium GD 1] Length = 245 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 11/227 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + R+ R+ + + + Y V + +L+ L IK K D +LT CR +CGSC Sbjct: 2 KIRVARYTTEPQITEAVLEYEVQMQ--DATLLEVLNEIKTKQDSSLTYASGCRSSVCGSC 59 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M ++G LAC + + V P+ + +I+DLVVDM YS + + W T+SP Sbjct: 60 SMRVNGREVLACAYKV---QDGDLVEPMKNSPIIRDLVVDMDKAYSFNAKAKAWQSTLSP 116 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + ++ + + +C++C C ++CP Y N + ++GP L + +R++ D R+ Sbjct: 117 STN----LTQDNEKINEIQSDCILCGSCYSACPVYAVN-EEFIGPFSLTRVWRYVSDVRE 171 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E ++++ ++ ++ C CT CP+ ++ I K++ + Sbjct: 172 EDSSQKIETIQT-NGIWDCTLCNECTLVCPQDISSKADIEKLRSKSV 217 >gi|313206276|ref|YP_004045453.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Riemerella anatipestifer DSM 15868] gi|312445592|gb|ADQ81947.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Riemerella anatipestifer DSM 15868] gi|315023042|gb|EFT36055.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Riemerella anatipestifer RA-YM] gi|325336282|gb|ADZ12556.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Riemerella anatipestifer RA-GD] Length = 256 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 87/256 (33%), Gaps = 35/256 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + Y+I +PD+ +D +L N G Sbjct: 12 KIWRQKNNKSKGQFETYKISDVSPDSSFLEMLDMLNENLVNEGK--------------EP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ K ++ P VIK Sbjct: 58 VAFDHDCREGICGMCSLYINGRAHGPDTGITTCQLHMRMFKDGETIHIEPWRSAAFPVIK 117 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DLVVD S F + + + A + ED K C+ C C +C Sbjct: 118 DLVVDRSAFDRIMAAGGFISVNTSGNTTDANSIPVPKEDADKAMDAAACIGCGACVATCK 177 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N L + Y L R E + L + D C C CPK Sbjct: 178 ----NGSAMLFVGAKVSQYALLPQGRVEAKRRVLKMVAAMDEEGFGNCSNTGACEVECPK 233 Query: 240 GLNPAKAIAKIKMMLL 255 G++ + IA++ L Sbjct: 234 GISL-ENIARMNREFL 248 >gi|303244047|ref|ZP_07330386.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanothermococcus okinawensis IH1] gi|302485699|gb|EFL48624.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanothermococcus okinawensis IH1] Length = 504 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 20/236 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K +I N + Y V VLD L YI + + R SCR G CG Sbjct: 1 MKTVKIK-----VSRNGVFEEYEVP---ENITVLDALNYINKTYNKNIQYRASCRAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC M I+ LAC ++ + + PL VIKDL+VD S +Y + ++ +L+ Sbjct: 53 SCAMTINNEPKLACKTKVE---DGMKIEPLRGFKVIKDLIVDRSSYYKKLYNLRNYLQYD 109 Query: 147 SPKPAKELLQS---HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + KE D + + + C+ C C + CPS ++ Y GP + Q R+ Sbjct: 110 EEEKDKEGELLSICPNDIKDLKNVRGCIDCLSCLSICPSRKFSD--YAGPTFMRQLARFA 167 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D RD+ E+ +Y C T C + CP+ ++ KAI K++ + Sbjct: 168 FDPRDKGDREKEAYF---EHIYNCTTCGKCVEVCPQEIDIVHKAIEKLRALSFKNG 220 >gi|190899176|gb|ACE98101.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899184|gb|ACE98105.1| 2Fe-2S ferredoxin [Populus tremula] Length = 160 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 78/132 (59%), Positives = 98/132 (74%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 TNPTKPQHLKTFQIYRWNPDNPTKPELQNYEIDLNKCGPMVLDALIKIKNEIDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 84 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 143 Query: 139 IEPWLKTVSPKP 150 +EPWLK +P P Sbjct: 144 MEPWLKRKNPPP 155 >gi|190899168|gb|ACE98097.1| 2Fe-2S ferredoxin [Populus tremula] gi|190899194|gb|ACE98110.1| 2Fe-2S ferredoxin [Populus tremula] Length = 160 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 78/132 (59%), Positives = 98/132 (74%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 PT ++LK ++IYRWNPDN P + Y +DL+ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 TNPTKPQHLKTFQIYRWNPDNPTKPELQNYEIDLNKCGPMVLDALIKIKNEIDPTLTFRR 83 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MN+DG N LAC+ + + PLPHM VIKDLVVDM++FY+Q++S Sbjct: 84 SCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKS 143 Query: 139 IEPWLKTVSPKP 150 +EPWLK +P P Sbjct: 144 MEPWLKRKNPPP 155 >gi|225629631|ref|ZP_03787633.1| succinate dehydrogenase catalytic subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591514|gb|EEH12552.1| succinate dehydrogenase catalytic subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 122 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 98/122 (80%), Gaps = 1/122 (0%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ ++GKI+ P K+++ ++IYRW+ D++ NP +DT+++D+D+CGPMV Sbjct: 1 MVQFSLPKNSKINQKGKIYPIPARAKHIRRFQIYRWSADDEKNPSIDTFFIDMDSCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD L+ IK++ID TLT RRSCREGICGSC MNIDGTNTLAC + + DIKG + +YPLPHM Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLPHM 120 Query: 120 SV 121 V Sbjct: 121 YV 122 >gi|307719969|ref|YP_003891109.1| succinate dehydrogenase subunit B [Sulfurimonas autotrophica DSM 16294] gi|306978062|gb|ADN08097.1| succinate dehydrogenase subunit B [Sulfurimonas autotrophica DSM 16294] Length = 235 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 18/223 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R ++ D++ +L+ L IK + D +L CR +CGSC Sbjct: 2 KVHVKR---ESDFVAY------DVELPDATLLEVLSSIKTEQDNSLAFSSGCRSSVCGSC 52 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 M ++ LAC + + + PL ++ VI+DLVV+M + + WL+T + Sbjct: 53 SMRVNEKEVLACAYKV---QDGDVIEPLKNIEVIRDLVVNMDKALETKKRAKTWLQTYNK 109 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + +HED + +C++C C ++CP Y N + +LGP L ++++ D R+ Sbjct: 110 EA----KLTHEDEKINALQSDCILCGSCYSACPVYAVN-EEFLGPFALTGVWKYVSDKRE 164 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E++D ++ ++ C CT CP+G++ I K++ Sbjct: 165 AQPKEKIDTIQT-NGVWDCTLCNECTLVCPQGISSKADIEKLR 206 >gi|239945882|ref|ZP_04697819.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] gi|239992351|ref|ZP_04713015.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces roseosporus NRRL 11379] gi|291449339|ref|ZP_06588729.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] gi|291352286|gb|EFE79190.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces roseosporus NRRL 15998] Length = 248 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 90/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N + G M TY VD + L+ L + ++ D + CREG Sbjct: 4 TLRVWRQRNAEEPGA--MATYEVDNISADMSFLEMLDTLNEELTLAGDEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + P VIKDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFADGDTIDIEPWRASAFPVIKDLVVDRSSFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +S T + A D EC+ C C +CP N L Sbjct: 122 IIQSGGYISAPTGTAPDAHATPVPKPDADFAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +IA + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVAQMDEEGFGGCTLAGECATACPKGIPLP-SIAAMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|152991747|ref|YP_001357468.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Sulfurovum sp. NBC37-1] gi|151423608|dbj|BAF71111.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Sulfurovum sp. NBC37-1] Length = 243 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMK 105 Y + +L L+YIK D TLT CR +CG+C + ++ LAC +K Sbjct: 14 QNYRLP--AGEIPLLSALVYIKETQDATLTFSAGCRASVCGTCAVRVNRREELACSYKVK 71 Query: 106 DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 + PL + SV++DL VD + + WL+ +HED ++ + Sbjct: 72 ---PGDVIEPLQYHSVLRDLKVDKNKAQETLKKATTWLQKFQEA-----PLTHEDEKRTE 123 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C++C C ++CP + N D +LGP L +AYR+ D R+ +DN++ ++ Sbjct: 124 KQTDCILCDSCYSACPVFAVNPD-FLGPFALTRAYRYSEDKREGDAKTIIDNVQT-NGVW 181 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C CT CPKG++P I ++ Sbjct: 182 DCTLCGECTAVCPKGIDPKMDITMLR 207 >gi|295662569|ref|XP_002791838.1| succinate dehydrogenase iron-sulfur subunit [Paracoccidioides brasiliensis Pb01] gi|226279490|gb|EEH35056.1| succinate dehydrogenase iron-sulfur subunit [Paracoccidioides brasiliensis Pb01] Length = 191 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 73/146 (50%), Positives = 93/146 (63%), Gaps = 3/146 (2%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+ + LK ++IYRWNPD P M Y +DL+ GPM+LD L+ IKN Sbjct: 34 SKTAESPTHTT-SQTPKLKTFKIYRWNPDKPTEKPRMQNYALDLNKTGPMMLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTSKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKE 153 DM++FY Q++SI+P+L+ +P P Sbjct: 153 DMTYFYKQYKSIKPYLQRDTPSPDVH 178 >gi|325954106|ref|YP_004237766.1| 4Fe-4S ferredoxin iron-sulfur-binding protein [Weeksella virosa DSM 16922] gi|323436724|gb|ADX67188.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Weeksella virosa DSM 16922] Length = 258 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 24/250 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +I+R + K ++TY ++ + L+ L + + + CREG Sbjct: 9 ITLKIWRQQ-NAKAKGKLETYTLNDVSTDSSFLEMLDMLNENLIEEGKEPIAFDHDCREG 67 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG C + I+G C M+ K +Y P VIKDL+VD S F Sbjct: 68 ICGMCSLYINGRPHGPDYGTTTCQLHMRSFKDGDTIYIEPWRSKAFPVIKDLIVDRSSFD 127 Query: 134 S--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q + A + ++ C+ C C +C N L Sbjct: 128 RIQQAGGYVSINTSGRTVDANTIPVPKQNADDAFDAATCIGCGACVAACK----NGSAML 183 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L R E + D C C CPKG++ + IA+ Sbjct: 184 FVGAKVSQFALLPQGRVEASKRVQKMVAQMDAEGFGNCSNTGACEVECPKGISLSN-IAR 242 Query: 250 IKMMLLDRKI 259 + L KI Sbjct: 243 MNREFLSAKI 252 >gi|225851275|ref|YP_002731509.1| fumarate reductase iron-sulfur subunit [Persephonella marina EX-H1] gi|225644896|gb|ACO03082.1| fumarate reductase iron-sulfur subunit [Persephonella marina EX-H1] Length = 243 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +I R+N + D + V +++ VL+ L++IK+ +D +L+ R CR ICG+ Sbjct: 3 VKIKIKRFN---GKDHYFDQFDVQIED-RTTVLEALMHIKDYMDNSLSFRAQCRSAICGT 58 Query: 88 CGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 C + I + LAC +K + V P ++ VIKDL+ D F + + + W Sbjct: 59 CAVKIGENHVLACKTKVKQFVQDGVLTVEPAGNLPVIKDLITDQDIFLLKLKDAKAWFVP 118 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +D + + +C++C C + CP + + GP ++ +R+ D Sbjct: 119 SEK----FEPVYPDDLKLYEKETDCILCGICYSVCPVFQT-GQEFGGPINFVKIFRFWKD 173 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + +R+ + D R+ C CT SCPK + + I ++K Sbjct: 174 KNDALKDQRI-VIADKNRITACVHCKYCTFSCPKEIPVEQDILQLK 218 >gi|302523209|ref|ZP_07275551.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. SPB78] gi|318061386|ref|ZP_07980107.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. SA3_actG] gi|318078190|ref|ZP_07985522.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. SA3_actF] gi|302432104|gb|EFL03920.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. SPB78] Length = 249 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 85/246 (34%), Gaps = 22/246 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NADAPGAMVTYEVDSISEDMSFLEMLDTLNEELTLKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ K + P VIKDL V+ S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFKDGDTIDIEPWRAAAFPVIKDLAVNRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +S T + A D EC+ C C +CP N L + Sbjct: 123 IQSGGYISAATGTAPEAHSTPVPKPDADYAFENAECIGCGACVAACP----NGSAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKINHLNVLPQGAPERESRVLDMVAQMDTEGFGGCTLTGECATACPKGIPLM-SITNMNR 237 Query: 253 MLLDRK 258 L + Sbjct: 238 EWLRAQ 243 >gi|329938510|ref|ZP_08287935.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] gi|329302483|gb|EGG46374.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces griseoaurantiacus M045] Length = 249 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 87/246 (35%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADADGA--MSTYEVDGISSDMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRAFQDGDTIDIEPWRAAAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A D EC+ C C +CP N L Sbjct: 122 IIQAGGYVTAPTGSAPEAHATPVPKADADFAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKINHLNVLPQGAPERETRVLDMVAQMDEEGFGGCTLAGECATACPKGIPLM-SITGMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|238063764|ref|ZP_04608473.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Micromonospora sp. ATCC 39149] gi|237885575|gb|EEP74403.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Micromonospora sp. ATCC 39149] Length = 253 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 90/247 (36%), Gaps = 25/247 (10%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R + P++ M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQSGPED--KGRMVTYQVDGVSPDMSFLEMLDVLNERLILAGEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG CG+ I+G T AC M+ + P VIKDLVVD + F Sbjct: 62 ICGMCGLMINGDAHGPQRGTTACQLHMRQFSDGDTIDIEPWRARAFPVIKDLVVDRTAFD 121 Query: 134 SQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T S A + + D C+ C C +CP N L Sbjct: 122 KIIAAGGYITAPTGSAPEAHSVPVAKADADAAFSSAACIGCGACVAACP----NGSGMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + L + E + ++ D C CT CPKG+ P I ++ Sbjct: 178 TAAKITQLSLLPQGQPERYTRVIGMVDAHDEAGFGGCTNAGECTAVCPKGI-PLNTIGRL 236 Query: 251 KMMLLDR 257 L Sbjct: 237 NRDYLRA 243 >gi|302527544|ref|ZP_07279886.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. AA4] gi|302436439|gb|EFL08255.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. AA4] Length = 247 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 85/246 (34%), Gaps = 24/246 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R + PD+ G + Y VD + L+ L + + + CREG Sbjct: 4 TLRVWRQSGPDDDG--RLVDYPVDDASPDMSFLELLDVLNQHLIEDGAEPIAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIK-------GAIAVYPLP--HMSVIKDLVVDMSHFYS 134 ICGSCG+ I+G + + V P V+KDLVVD S F Sbjct: 62 ICGSCGVVINGRAHGPERTTTCQLHLRSFRDGDVLDVEPWRAKGFPVLKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T S A D C+ C C +CP N L Sbjct: 122 IIEAGGYVTAPTGSAPEAHATPVPKPDADLAFDNATCIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E LD + D C C SCPKG+ A +IA + Sbjct: 178 SAKVAHLNSLPQGQPERAQRVLDMVETMDAADFGGCTNTGECVASCPKGIPLA-SIANLN 236 Query: 252 MMLLDR 257 + Sbjct: 237 REFMKA 242 >gi|149370995|ref|ZP_01890590.1| succinate dehydrogenase/fumarate reductase iron-sulfur [unidentified eubacterium SCB49] gi|149355781|gb|EDM44339.1| succinate dehydrogenase/fumarate reductase iron-sulfur [unidentified eubacterium SCB49] Length = 248 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 87/247 (35%), Gaps = 24/247 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + M TY +D L+ L + ++ + + CREGI Sbjct: 4 TLKIWRQ-ANANAKGSMQTYPIDGIEGDMSFLEMLDVLNEELVNKGEEPVVFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF-- 132 CG+C + I+G C M+ K + P VIKDL+VD S F Sbjct: 63 CGACSLQINGEPHGPDRLVTTCQLHMRMFKDGDEIVIEPFRAKAFPVIKDLMVDRSSFER 122 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A E+ C+ C C +C N+ L Sbjct: 123 IQQAGAYVSVNTSGNTIDANATPIEKENADAAFEAATCIGCGACVAACK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + Y L + E L+ + D C C CPKG++ + IA++ Sbjct: 179 TSAKVSQYALLPQGQVEASTRVLNMVEQMDKEGFGNCTNTGACEVECPKGISL-ENIARM 237 Query: 251 KMMLLDR 257 + Sbjct: 238 NREYMAA 244 >gi|145594253|ref|YP_001158550.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Salinispora tropica CNB-440] gi|145303590|gb|ABP54172.1| succinate dehydrogenase subunit B [Salinispora tropica CNB-440] Length = 251 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 82/257 (31%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW P + + Y++ +PD +D L G + Sbjct: 6 RIWRQTGPEDKGQMVTYQVEDISPDMSFLEMLDVLNERLTLAG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG CGM I+G AC M+ + P V+K Sbjct: 52 VAFDHDCREGICGMCGMMINGNAHGPQRGTTACQLHMRQFADGDTIDIEPWRARAFPVVK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVV+ + F T S A + D C+ C C +CP Sbjct: 112 DLVVNRNAFDQIIAGGGFVTAPTGSAPEAHAAPVAKADADAAFESAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E + ++ D C CT CPKG Sbjct: 171 ---NGSGMLFTAAKVTQLSLLPQGQPERYTRVIGMVDSHDDAGFGGCTNAGECTVVCPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + I ++ L Sbjct: 228 IPLHT-IGRLNRDYLAA 243 >gi|148681385|gb|EDL13332.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip), isoform CRA_b [Mus musculus] Length = 185 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 4/141 (2%) Query: 25 KNLKEYRIYRWNPD-NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSCREG Sbjct: 39 PRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDR 161 LK + ++ LQS EDR Sbjct: 159 LKKKDESQEGKQQYLQSIEDR 179 >gi|86742150|ref|YP_482550.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Frankia sp. CcI3] gi|86569012|gb|ABD12821.1| succinate dehydrogenase subunit B [Frankia sp. CcI3] Length = 248 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R M TY V N L+ L + ++ + ++ CREGI Sbjct: 4 TLRIWRQ-AGPDEPGRMVTYEVPDANPDMSFLELLDVLNERLTLRGEEPVSFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+CG+ I+G C +++ + P V++DL+VD S Sbjct: 63 CGACGVVINGQAHGPRERTTTCQLHVREFSDGDVIDVEPWRSVAFGVVRDLMVDRSGLDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A C+ C C +CP N L Sbjct: 123 IIQAGGYISAPTGSAPEAHSTPVPKAVADTAFDNATCIGCGACVAACP----NGSAMLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E L+ + D C CT +CPKG+ P +IA + Sbjct: 179 SAKVVHLNSLPQGAPERASRTLNLVEAMDAEGFGGCTNTGECTVACPKGI-PLDSIATLN 237 Query: 252 MMLLDRKI 259 +L I Sbjct: 238 REVLRASI 245 >gi|163753282|ref|ZP_02160406.1| succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) [Kordia algicida OT-1] gi|161327014|gb|EDP98339.1| succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) [Kordia algicida OT-1] Length = 248 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 88/258 (34%), Gaps = 35/258 (13%) Query: 16 KIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + +Y+I +PD +D L G D Sbjct: 6 KIWRQKGANDKGKMVDYQISDVSPDMSFLEMLDVLNTQLIEKG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICGSC + I+G C M+ K +Y P VIK Sbjct: 52 VAFDHDCREGICGSCSLYINGEAHGPDRLVTTCQLHMRKFKDGDTIYIEPWRAKAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD S F + + + + A + + C+ C C SC Sbjct: 112 DLIVDRSSFDRIQHAGGFISVNTSGNTQDANSIPIEKANADAAFDAATCIGCGACVASCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 NS L + + + L + E ++ + D C C CPK Sbjct: 172 ----NSSAMLFVSAKVSQFALLPQGQVEATDRVMNMVNQMDAEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDR 257 G++ + IA++ L Sbjct: 228 GISL-ENIARMNREYLKA 244 >gi|295835407|ref|ZP_06822340.1| fumarate reductase, iron-sulfur protein [Streptomyces sp. SPB74] gi|197696508|gb|EDY43441.1| fumarate reductase, iron-sulfur protein [Streptomyces sp. SPB74] Length = 249 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 85/246 (34%), Gaps = 22/246 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NADAPGAMVTYEVDSISEDMSFLEMLDTLNEELTLKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ K + P VIKDL V+ S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFKDGDTIDIEPWRAAAFPVIKDLAVNRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +S T + A D EC+ C C +CP N L + Sbjct: 123 IQSGGYISAATGTAPEAHSTPVPKPDADYAFENAECIGCGACVAACP----NGSAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKINHLNVLPQGAPERETRVLDMVAQMDTEGFGGCTLTGECATACPKGIPLM-SITNMNR 237 Query: 253 MLLDRK 258 L + Sbjct: 238 EWLRAQ 243 >gi|226287680|gb|EEH43193.1| succinate dehydrogenase iron-sulfur subunit [Paracoccidioides brasiliensis Pb18] Length = 191 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 3/146 (2%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 S+ I + LK ++IYRWNPD P M Y +DL+ GPM+LD L+ IKN Sbjct: 34 SKTAESPIHTT-SQTPKLKTFKIYRWNPDKPTEKPRMQNYALDLNKTGPMMLDALIRIKN 92 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + DPTLT RRSCREGICGSC MNIDG NTLAC + D +YPLPH V+KDLV Sbjct: 93 EQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTSKESRIYPLPHTYVVKDLVP 152 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKE 153 DM++FY Q++SI+P+L+ +P P Sbjct: 153 DMTYFYKQYKSIKPYLQRDTPSPDVH 178 >gi|149024454|gb|EDL80951.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_a [Rattus norvegicus] Length = 185 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 81/141 (57%), Positives = 101/141 (71%), Gaps = 4/141 (2%) Query: 25 KNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +K + IYRW+PD P M TY VDL+ CGPMVLD L+ IKN+ID TLT RRSCREG Sbjct: 39 PRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREG 98 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNI+G NTLAC + + G + +YPLPHM VIKDLV D+S+FY+Q++SIEP+ Sbjct: 99 ICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158 Query: 143 LKTVSP--KPAKELLQSHEDR 161 LK + ++ LQS EDR Sbjct: 159 LKKKDESQEGKQQYLQSIEDR 179 >gi|320007031|gb|ADW01881.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces flavogriseus ATCC 33331] Length = 248 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 89/250 (35%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N + G M TY VD + L+ L + ++ D + CREG Sbjct: 4 TLRVWRQQNAEAPGA--MATYEVDGISQDMSFLEMLDTLNEELILGGDEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFDDGDTIDIEPWRASAFPVVKDLVVDRSSFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYISAPTGTAPDAHATPVPKPDADSAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVATMDDEGFGGCTLTGECATACPKGIPLP-SITAMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|239927274|ref|ZP_04684227.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291435615|ref|ZP_06575005.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] gi|291338510|gb|EFE65466.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces ghanaensis ATCC 14672] Length = 249 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 86/245 (35%), Gaps = 22/245 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NADAEGAMSTYQVDGISPDMSFLEMLDTLNEELILKGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ K + P VIKDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFKDGDTIDIEPWRAAAFPVIKDLVVDRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ + T S A D EC+ C C +CP N L + Sbjct: 123 IQAGGYISVPTGSAPDAHATPVPKPDADFAFEHAECIGCGACVAACP----NGAAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKVNHLNVLPQGAPERETRVLDMVAQMDEEGFGGCTLAGECATACPKGIPLT-SITGMNK 237 Query: 253 MLLDR 257 L Sbjct: 238 EWLRA 242 >gi|159037330|ref|YP_001536583.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Salinispora arenicola CNS-205] gi|157916165|gb|ABV97592.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Salinispora arenicola CNS-205] Length = 251 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 82/257 (31%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW P + + Y++ +PD +D L G + Sbjct: 6 RIWRQAGPEDKGRMVTYQVEEISPDMSFLEMLDVLNERLTLAG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG CGM I+G AC M+ + P V+K Sbjct: 52 VAFDHDCREGICGMCGMMINGNAHGPQRGTTACQLHMRQFTDGDTIDIEPWRARAFPVVK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD + F T S A + D C+ C C +CP Sbjct: 112 DLVVDRNAFDRIIAGGGFVTAPTGSAPEAHAAPVAKADADAAFESAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E + ++ D C CT CPKG Sbjct: 171 ---NGSGMLFTAAKVTQLSLLPQGQPERYTRVIGMVDSHDDAGFGGCTNAGECTVVCPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + I ++ L Sbjct: 228 IPLHT-IGRLNRDYLAA 243 >gi|134045565|ref|YP_001097051.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus maripaludis C5] gi|132663190|gb|ABO34836.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanococcus maripaludis C5] Length = 494 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 21/237 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K + I K + V + G VL L YI + R SCR G CG Sbjct: 1 MKTFTIT-----VKKTEGFKKFEVPV---GITVLSALEYINKTYGENIQFRSSCRAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC M I+ + LAC ++D + PL VI DLVV+ +Y + ++ +++ Sbjct: 53 SCAMMINKKSKLACKTKVEDNAI---IEPLDGFDVISDLVVNREPYYKKIGTLRNYIQKK 109 Query: 147 SPKPAKELLQ----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K +E L +D + + + C+ C C CP+ ++ Y GP ++ Q R+ Sbjct: 110 TEKITEEDLDKLKLYPDDLKDVKKIRGCIDCLSCIAMCPARKYSD--YPGPTLMRQLARF 167 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D +DE E D +Y C T C + CPK ++ A+ K++ + Sbjct: 168 AFDPKDELDRE--KEAFDEN-IYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFKKG 221 >gi|307354778|ref|YP_003895829.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanoplanus petrolearius DSM 11571] gi|307158011|gb|ADN37391.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanoplanus petrolearius DSM 11571] Length = 488 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 19/232 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R +P + P Y V+++ G VLD L+ +++ +DP+L+ R C G CGSC Sbjct: 10 KVEILRQDPSSGITPSYKGYNVEVN-EGARVLDVLIAVRDNLDPSLSFRYCCGAGQCGSC 68 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + I+G LAC+ + + + PL + VIKDL VD+ E Sbjct: 69 AIKINGEPKLACMTIAE---DGMILEPLD-LPVIKDLAVDL--------VSELSKMPGLV 116 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 L E+ +I + +C+ C CC + CP+ + GP ++ Q R +D R Sbjct: 117 PSRCGELPEKEEIDRIKPIRDCIECMCCVSVCPAMRVVD--FAGPTLMRQEMRLALDPR- 173 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 G R+ D L+ C + C +CPK + P +AI K++ + + + Sbjct: 174 -SSGNRVPLAVDE-GLFTCTSCQACYLACPKKIAIPGRAIEKLRELANRQGL 223 >gi|154173893|ref|YP_001408268.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter curvus 525.92] gi|112802774|gb|EAU00118.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter curvus 525.92] Length = 321 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 12/239 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R+N Y + + G +L LL IK D TL SCR ICG+ Sbjct: 2 KIIIDRFN---GKEKYQKEYTLTSEEIAGKTLLSVLLLIKQTKDITLNFTASCRSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMK------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M+ D I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMEELLKEYDNPDTIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118 Query: 142 WLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + S ++ Q+ + +I ++C++C C++ C +S Y+ P + A+ Sbjct: 119 TIVPKSEFSPEKGCKQTQAEFDRISKQWDCILCGSCASECNKLAADSSDYMQPFVFTHAW 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R DSR + L+ C C CPKG++ A IA +++M + + Sbjct: 179 RAADDSRSNDPVIHVKP-SVANGLWMCVHCQECADRCPKGISAADDIASLRVMAQRKGL 236 >gi|152976914|ref|YP_001376431.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025666|gb|ABS23436.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus cytotoxicus NVH 391-98] Length = 253 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + P + + ++ L+ I K + Sbjct: 2 PEKTIRLIITRQD-GPNSQPYDQEFEIPY-RPNMNIISALMEIRRNPVDAKGNHTTPVAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ + + P+ V++DL VD S + Sbjct: 60 DMNCLEEVCGACSMVINGRPRQSCTALIDKLEQPVRLQPMKTFPVVRDLQVDRSRMFHAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGAGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Q + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQVRLFNAHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|326942299|gb|AEA18195.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar chinensis CT-43] Length = 253 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + + + ++ L+ I K + Sbjct: 2 SEKTIRLIITRQD-GPDAQEFDQEFEIPY-RPNMNIISALMEIRRNPVDSKGNQTTPIAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 60 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|260886712|ref|ZP_05897975.1| succinate dehydrogenase, iron-sulfur protein [Selenomonas sputigena ATCC 35185] gi|330839461|ref|YP_004414041.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Selenomonas sputigena ATCC 35185] gi|260863564|gb|EEX78064.1| succinate dehydrogenase, iron-sulfur protein [Selenomonas sputigena ATCC 35185] gi|329747225|gb|AEC00582.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Selenomonas sputigena ATCC 35185] Length = 250 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 12/246 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID-------PTLT 75 E+ + I R + +P + VD G V+ L+ I+ + Sbjct: 2 AEQKKVRFIIERQD-GPDASPYKQEFDVDY-RPGLNVVAALMEIQKNPVTVDGKTVAPVN 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G AC + +++ I + P VI+DL++D S + Sbjct: 60 WECNCLEKVCGACMMVINGKARQACCSLIDELEQPITLAPARTFPVIRDLLIDRSVMFES 119 Query: 136 HRSIEPWLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + I W++ + LQ+ + + C+ C CC +CP+ SD ++GP+ Sbjct: 120 LKRIHGWIEIDGSWDNPDAPLQNPYTAETTYEISHCMTCGCCLEACPNVGPQSD-FIGPS 178 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +Q + + +F +RL+ L + C NC ++CPK + K +A++ Sbjct: 179 PTVQTLLFNLHPMGKFDEPKRLEALMGKGGITSCGNSQNCEKACPKEIKLTKHLAQLNRD 238 Query: 254 LLDRKI 259 + + + Sbjct: 239 VNKQAL 244 >gi|195952683|ref|YP_002120973.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobaculum sp. Y04AAS1] gi|195932295|gb|ACG56995.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobaculum sp. Y04AAS1] Length = 216 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 18/226 (7%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + +I R + +TY V G +LD L YIK +DP+L R+ C GICG+ Sbjct: 3 IKLKIKRQD-------RFETYEVPYK-EGMTLLDALKYIKEYLDPSLAFRQFCGAGICGT 54 Query: 88 CGMNIDGTNTLACVKD---MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 C +N++G L C + + + PL + V+KDLVVD+S+ + ++ + W+ Sbjct: 55 CAVNVNGFPKLICKEQALSYALDENPTVLEPLNNAEVVKDLVVDISNMSYRIKAYKAWI- 113 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 L E +KI+ +C++C C + CP Y GP + YR I Sbjct: 114 ---TPIETNLKIDQELSKKIEESSDCILCYACQSFCP--EVADKDYAGPLFFAKLYRLFI 168 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 D RD G RL +D L C + C +CPK + PA I ++ Sbjct: 169 DPRDREHGIRLLEAKDTLIL-HCLSCNKCNNACPKEVKPATLIREL 213 >gi|299138447|ref|ZP_07031626.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidobacterium sp. MP5ACTX8] gi|298599693|gb|EFI55852.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidobacterium sp. MP5ACTX8] Length = 252 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 10/246 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM------VLDGLLYIKNKIDPTLT 75 + I R + G + + + + + + +T Sbjct: 3 QAATRTIKVEIKRQS-TPDGKATTEAFEIPYRPNMNITSLLGEIALNPTTVTGVETTPIT 61 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E ICGSC M I+G +AC + ++ I + PL V++DL VD S + Sbjct: 62 YDSNCLEEICGSCAMLINGKAMMACSALVDKLEQPIRLAPLSKFPVVRDLAVDRSVLFEN 121 Query: 136 HRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++++ W+ Q + +++ L C+ C C CP + + ++G A Sbjct: 122 LKAVKAWVPIDGTYDLGPAPRQFPQVQEQRYPLSNCISCTICMEVCPQFNDATG-FVGAA 180 Query: 195 ILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + QA + +D + +RL L + C NC Q+CPKGL +AI+ + Sbjct: 181 TIAQARLFNMDPAGSVLKEDRLRALAGDGGIQECGFAQNCVQACPKGLPLTEAISDMGRD 240 Query: 254 LLDRKI 259 + +++ Sbjct: 241 VFVQQV 246 >gi|148656520|ref|YP_001276725.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Roseiflexus sp. RS-1] gi|148568630|gb|ABQ90775.1| succinate dehydrogenase subunit B [Roseiflexus sp. RS-1] Length = 249 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 89/258 (34%), Gaps = 34/258 (13%) Query: 17 IWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W E Y+ PD +D +L G + + Sbjct: 7 VWRQKNAQSEGRFVTYQAKNIIPDMSFLEMLDVVNQELILKG--------------EEPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICGSCGM I+G AC M+ K + P V+KD Sbjct: 53 AFEHDCREGICGSCGMVINGYPHGGHRGTTACQLHMRHFKDGDVITIEPWRARAFPVMKD 112 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD S F ++ T + A +L ++ C+ C C +CP Sbjct: 113 LIVDRSAFDRIIQAGGFISANTGVAQDANTVLVPKQNADAAMDAAACIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N+ L A + L + E R+ D C I C +CPK + Sbjct: 171 --NASAMLFTAAKITHLGLLPQGQPERYTRVVRMVEQMDREGFGGCTNIGECAAACPKEI 228 Query: 242 NPAKAIAKIKMMLLDRKI 259 P IA++ LL KI Sbjct: 229 -PLDVIARMNRDLLVAKI 245 >gi|156743024|ref|YP_001433153.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Roseiflexus castenholzii DSM 13941] gi|156234352|gb|ABU59135.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Roseiflexus castenholzii DSM 13941] Length = 249 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 89/258 (34%), Gaps = 34/258 (13%) Query: 17 IWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W E Y+ PD +D +L G + + Sbjct: 7 VWRQKNAQSEGRFVTYQAKNIIPDMSFLEMLDVVNQELIMKG--------------EEPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICGSCGM I+G AC M+ K + P V+KD Sbjct: 53 AFEHDCREGICGSCGMVINGYPHGGHRGTTACQLHMRHFKDGDTITIEPWRARAFPVMKD 112 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD S F ++ T + A +L ++ C+ C C +CP Sbjct: 113 LIVDRSAFDRIIQAGGFISANTGVAQDANAILVPKQNADAAMDAAACIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N+ L A + L + E R+ D C I C +CPK + Sbjct: 171 --NASAMLFTAAKIAHLGLLPQGQPERYTRVVRMVEQMDKEGFGGCTNIGECAAACPKVI 228 Query: 242 NPAKAIAKIKMMLLDRKI 259 P IA++ LL KI Sbjct: 229 -PLDVIARMNRDLLVAKI 245 >gi|313246740|emb|CBY35613.1| unnamed protein product [Oikopleura dioica] Length = 176 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 88/154 (57%), Positives = 109/154 (70%), Gaps = 2/154 (1%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P + KE++IYRWNPD+ G P M+TY VD++ CGPMVLD L+ IKN+IDPTLT RR Sbjct: 24 PVPVDKGE-KEFQIYRWNPDDGGQPRMETYKVDMNKCGPMVLDALIMIKNEIDPTLTFRR 82 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SCREGICGSC MNIDG N LAC+ D+ ++PLPHM V+KDLV DM++FY+Q++S Sbjct: 83 SCREGICGSCAMNIDGVNNLACLSYCTDVGKTTKIWPLPHMYVVKDLVPDMNNFYAQYKS 142 Query: 139 IEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECV 171 IEPW K E QS DR K+DGLYE + Sbjct: 143 IEPWLKKRDETPRTTENYQSEADRAKLDGLYEVI 176 >gi|157165688|ref|YP_001466868.1| O-acetylhomoserine (thiol)-lyase [Campylobacter concisus 13826] gi|112801310|gb|EAT98654.1| succinate dehydrogenase, iron-sulfur protein subunit [Campylobacter concisus 13826] Length = 321 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 12/238 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + I R++ TY + + G +L L IK K D TL SCR ICG+ Sbjct: 2 KIIIDRFD---GTKKYESTYELTNEEIAGKTLLTVLFDIKQKKDATLNFTASCRSAICGA 58 Query: 88 CGMNIDGTNTLACVKDMK------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C + ++G + LAC M D I + PL + VI DL+VD R I P Sbjct: 59 CAVRVNGHSYLACDTKMNELLAEYDNPDTIRISPLGNFKVISDLMVDWEPSIENLRKIRP 118 Query: 142 WLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + AK QS ++ K+ ++C++C C++ C ++ Y+ P + + AY Sbjct: 119 SITAKPEFSAAKGCKQSQKEYDKVALEWDCILCGACASECNKLEADASDYMQPFVFVHAY 178 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R DSR + L D L+ C C CPKG++ I +++M + + Sbjct: 179 RAAFDSRSKDPMPHLKPAID-NGLWMCVKCQECADRCPKGISACGDITDLRIMAIQKG 235 >gi|150402247|ref|YP_001329541.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus maripaludis C7] gi|150033277|gb|ABR65390.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus maripaludis C7] Length = 494 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 21/237 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K + I K + V + G VLD L YI + R SCR G CG Sbjct: 1 MKTFTIT-----VKKTEGFKKFEVPV---GLTVLDALEYINKTYGENIQFRSSCRAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+ + LAC ++D + + PL VI DLVVD +Y + ++ +++ Sbjct: 53 SCAVMINKKSKLACKTKVEDN---MIIEPLEGFDVISDLVVDREPYYKKIATLRNYIQKK 109 Query: 147 SPKPAKELLQ----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K ++ L +D + + + C+ C C CP+ ++ Y GP ++ Q R+ Sbjct: 110 NDKITEDELDELKLYPDDLKDVKKIRGCIGCLSCVAMCPARKYSD--YPGPTLMRQLARF 167 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D +DE E D +Y C T C + CPK ++ A+ K++ ++ Sbjct: 168 AFDPKDELDRE--KEAFDEN-IYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFNKG 221 >gi|45358630|ref|NP_988187.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus maripaludis S2] gi|51701958|sp|Q6LYC4|Y1067_METMP RecName: Full=Uncharacterized iron-sulfur protein MMP1067 gi|45047496|emb|CAF30623.1| Succinate dehydrogenase/fumarate reductase iron-sulfur subunit // Methanosarcina type heterodisulfide reductase subunit D [Methanococcus maripaludis S2] Length = 494 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K + I K + V + G +LD L YI + R SC+ G CG Sbjct: 1 MKTFTIT-----VKKTEGFKKFEVPV---GLTILDALEYINKTYGENIQFRSSCKAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+ + LAC ++D + + PL VI DLVVD +Y + ++ +++ Sbjct: 53 SCAVMINKKSKLACKTKVEDN---MIIEPLEGFDVISDLVVDREPYYKKIGTLRNYIQKK 109 Query: 147 SPKPAKELLQ----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K +++ L +D + + + C+ C C CP+ +++ Y GP ++ Q R+ Sbjct: 110 NEKISEKELDGLKLYPDDLKDVKKIRGCIDCLSCIAMCPARKYSN--YPGPTLMRQLARF 167 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D +DE E D +Y C T C + CPK ++ A+ K++ + Sbjct: 168 AFDPKDEIDRE--KEAFDEN-IYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFKKG 221 >gi|328886884|emb|CCA60123.1| Succinate dehydrogenase iron-sulfur protein [Streptomyces venezuelae ATCC 10712] Length = 249 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 86/246 (34%), Gaps = 22/246 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R D M TY VD + L+ L + + + + CREGI Sbjct: 4 TLRVWRQR-DADTPGAMSTYDVDGISADMSFLEMLDTLNEDLILRGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFRDGDTIDVEPWRAAAFPVVKDLVVDRSAFDRV 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T S A D EC+ C C +CP N L + Sbjct: 123 IQAGGYISAPTGSAPEAHATPVPKADADSAFEHAECIGCGACVAACP----NGSAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I+ + Sbjct: 179 AKVNHLNVLPQGSPERETRVLDMVAQMDAEGFGGCTLTGECATACPKGIPLP-SISAMNK 237 Query: 253 MLLDRK 258 L + Sbjct: 238 EWLRAR 243 >gi|300785122|ref|YP_003765413.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] gi|299794636|gb|ADJ45011.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei U32] Length = 248 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 82/256 (32%), Gaps = 33/256 (12%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W P E L Y + +PD +D L G D Sbjct: 6 RVWRQAGPAAEGRLVAYPVDGISPDMSFLEMLDVLNQRLIEAG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLP----HMSVIKD 124 + CREGICGSCG+ I+G AC ++ + P V+KD Sbjct: 52 VAFDHDCREGICGSCGVVINGQAHGPERTTACQLHLRSFADGDVIDVEPWRAKGFPVVKD 111 Query: 125 LVVDMSHFYSQHRS-IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD S ++ T S A D C+ C C +CP Sbjct: 112 LVVDRSALDRIVQAGGYVSAPTGSAPDAHATPVPKPDADLAFDNATCIGCGACVAACP-- 169 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N L A + L E LD + D C C SCPKG+ Sbjct: 170 --NGSATLFTAAKVTHLSLLPQGAPERASRVLDMVDAMDAEGFGGCTNTGECVASCPKGI 227 Query: 242 NPAKAIAKIKMMLLDR 257 +IA + L Sbjct: 228 PFT-SIATLNREYLAA 242 >gi|111225016|ref|YP_715810.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Frankia alni ACN14a] gi|111152548|emb|CAJ64288.1| Succinate dehydrogenase iron-sulfur protein [Frankia alni ACN14a] Length = 248 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGI 84 RI+R M Y V N L+ L + + + +T CREGI Sbjct: 4 TLRIWRQ-AGPAEPGRMVAYEVPDANPDMSFLELLDVLNERLTLEGEDPVTFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CGSCG+ I+G C ++ + P V+KDL+VD S Sbjct: 63 CGSCGVVINGQAHGPRALTTTCQLHVRSFSDGDVIDVEPWRSVAFGVLKDLMVDRSGLDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A C+ C C +CP N L Sbjct: 123 IIQAGGYISAPTGSAPEAHSTPVPKPIADTAFDNATCIGCGACVAACP----NGSAMLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E L+ + D C CT +CPKG+ P +IA + Sbjct: 179 SAKVTHLNSLPQGAPERASRVLNLVEAMDAEGFGGCTNTGECTNACPKGI-PLDSIATLN 237 Query: 252 MMLLDRKI 259 L + Sbjct: 238 REYLRASL 245 >gi|30022594|ref|NP_834225.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 14579] gi|30264582|ref|NP_846959.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Ames] gi|47530052|ref|YP_021401.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49187407|ref|YP_030659.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Sterne] gi|49480678|ref|YP_038567.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321881|ref|ZP_00394840.1| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Bacillus anthracis str. A2012] gi|165871496|ref|ZP_02216143.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0488] gi|167635631|ref|ZP_02393943.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0442] gi|167641658|ref|ZP_02399903.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0193] gi|170688276|ref|ZP_02879486.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0465] gi|170708332|ref|ZP_02898776.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0389] gi|177653088|ref|ZP_02935375.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0174] gi|190566942|ref|ZP_03019858.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis Tsiankovskii-I] gi|196034357|ref|ZP_03101766.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus W] gi|196039155|ref|ZP_03106461.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus NVH0597-99] gi|206969827|ref|ZP_03230781.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus AH1134] gi|218233405|ref|YP_002369311.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus B4264] gi|218899671|ref|YP_002448082.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus G9842] gi|225866490|ref|YP_002751868.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus 03BB102] gi|227817297|ref|YP_002817306.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. CDC 684] gi|229600090|ref|YP_002868795.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0248] gi|254686995|ref|ZP_05150853.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. CNEVA-9066] gi|254724558|ref|ZP_05186341.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. A1055] gi|254736619|ref|ZP_05194325.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Western North America USA6153] gi|254741657|ref|ZP_05199344.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Kruger B] gi|254754745|ref|ZP_05206780.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Vollum] gi|254757577|ref|ZP_05209604.1| succinate dehydrogenase iron-sulfur subunit [Bacillus anthracis str. Australia 94] gi|296504991|ref|YP_003666691.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis BMB171] gi|301056025|ref|YP_003794236.1| succinate dehydrogenase [Bacillus anthracis CI] gi|29898152|gb|AAP11426.1| Succinate dehydrogenase iron-sulfur protein [Bacillus cereus ATCC 14579] gi|30259240|gb|AAP28445.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. Ames] gi|47505200|gb|AAT33876.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181334|gb|AAT56710.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. Sterne] gi|49332234|gb|AAT62880.1| succinate dehydrogenase iron-sulfur protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712793|gb|EDR18323.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0488] gi|167510365|gb|EDR85766.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0193] gi|167529051|gb|EDR91806.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0442] gi|170126707|gb|EDS95590.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0389] gi|170667782|gb|EDT18535.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0465] gi|172081612|gb|EDT66683.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0174] gi|190561933|gb|EDV15902.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis Tsiankovskii-I] gi|195992899|gb|EDX56858.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus W] gi|196029782|gb|EDX68383.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus NVH0597-99] gi|206735515|gb|EDZ52683.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus AH1134] gi|218161362|gb|ACK61354.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus B4264] gi|218546038|gb|ACK98432.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus G9842] gi|225788091|gb|ACO28308.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus 03BB102] gi|227007344|gb|ACP17087.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. CDC 684] gi|229264498|gb|ACQ46135.1| succinate dehydrogenase, iron-sulfur protein [Bacillus anthracis str. A0248] gi|296326043|gb|ADH08971.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis BMB171] gi|300378194|gb|ADK07098.1| succinate dehydrogenase [Bacillus cereus biovar anthracis str. CI] Length = 253 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + + + ++ L+ I K + Sbjct: 2 SEKTIRLIITRQD-GPDAQAFDQEFEIPY-RPNMNIISALMEIRRNPVDSKGNQTTPIAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 60 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|297160446|gb|ADI10158.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces bingchenggensis BCW-1] Length = 249 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 89/246 (36%), Gaps = 24/246 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R + P+ G M Y VD + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQHGPNEPGA--MTAYEVDGISPEMSFLEMLDTLNEELILRGEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+CGM I+G C M+ + P V+KDLVVD S F Sbjct: 62 ICGACGMVINGQAHGPERTTTCQLHMRHFSDGDTIDVEPWRAAAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 S T S A EC+ C C +CP N L Sbjct: 122 IIGSGGYISAPTGSAPDAHATPVPKPVADTAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + LD + D C C +CPKG+ P ++I+ + Sbjct: 178 SAKVVHLNVLPQGQPERESRVLDMVGAMDEEGFGGCTNTGECAVACPKGI-PLQSISMMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 REFLRA 242 >gi|120601632|ref|YP_966032.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris DP4] gi|120561861|gb|ABM27605.1| succinate dehydrogenase subunit B [Desulfovibrio vulgaris DP4] Length = 239 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 17/236 (7%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++++R P DT+ V + VLD L I+ IDPTL R SC CG+ Sbjct: 6 VTFKVFRCAPG-GEASRFDTFEVAVPGH-ASVLDALDAIRVDIDPTLVYRHSCHHSSCGT 63 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C M I+G + LAC+ + ++G + + PL + + DL+VDM FY R + Sbjct: 64 CAMRINGRDRLACITPAHEAAAESSVQGTVTLEPLRGLPLQGDLMVDMRAFY---RHFDE 120 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW---NSDRYLGPAILLQ 198 T+ P + ++ L C+ C CC ++CP + + GPA+L Sbjct: 121 HWSTLRPSEGRAQAALPAGIERFTRLENCIECGCCVSACPVTGTETGDGTAFAGPAVLAA 180 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + R E L L P C + C+++CP G+ PA+AI ++ M Sbjct: 181 VRREM--GRGPDVPEGLAALAFGPHGEQHCQRHLACSRACPNGVYPARAIMDLRRM 234 >gi|319653323|ref|ZP_08007424.1| hypothetical protein HMPREF1013_04041 [Bacillus sp. 2_A_57_CT2] gi|317394972|gb|EFV75709.1| hypothetical protein HMPREF1013_04041 [Bacillus sp. 2_A_57_CT2] Length = 249 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 10/238 (4%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLRRSCREG 83 RI R + + + + + + + ++ + ++ +C E Sbjct: 8 LRIKRKDAE-NTAFYWEEFNIPFRKNMNVISALMEIQKNPVNVQGEKVSSVVWEYNCLEE 66 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +CG+C M I+G AC + ++ I + P+ V KDLVV+ +S + I+ W+ Sbjct: 67 VCGACSMKINGKVRQACSTLVDRLEQPIVLEPMETFPVEKDLVVNRERMFSALKKIKGWI 126 Query: 144 KTVSPKPA-KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L + E +Q+ C+ C CC +CP+ + ++GP L Q + Sbjct: 127 PIDGTYAMGAGPLITSEGQQEAYKYSTCMTCGCCLEACPNVN-SGSPFIGPQALGQTKYF 185 Query: 203 LIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + Q RL+ + + C NC Q CPK + AIA++ + Sbjct: 186 NMHPTGAQQKNHRLEVVISEEGIANCGNSQNCVQVCPKEIPLTTAIAELNKDANRYAL 243 >gi|213646510|ref|ZP_03376563.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 129 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 1/127 (0%) Query: 132 FYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 FY+Q+ I+P+L PA+E LQ E R+K+DGLYEC++CACCSTSCPS+WWN D++ Sbjct: 1 FYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKF 60 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +GPA LL AYR+LIDSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI I Sbjct: 61 IGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHI 120 Query: 251 KMMLLDR 257 K MLL R Sbjct: 121 KSMLLQR 127 >gi|292669532|ref|ZP_06602958.1| succinate dehydrogenase [Selenomonas noxia ATCC 43541] gi|292648741|gb|EFF66713.1| succinate dehydrogenase [Selenomonas noxia ATCC 43541] Length = 250 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 12/246 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID-------PTLT 75 E+ + I R + +P + VD G V+ L+ I+ P Sbjct: 2 AEQKKVRFIIERQD-GPNESPYTQEFEVDY-RTGLNVVAALMEIQKNPVTVDGKRVPPPV 59 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +C E +CG+C M I+G AC + + I + P VI+DL++D S + Sbjct: 60 WECNCLEKVCGACMMVINGRAQQACCALVDHLAQPIRIQPARTFPVIRDLLIDRSVMFES 119 Query: 136 HRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + I W++ K+ Q+ + L C+ C CC +CP+ SD ++GPA Sbjct: 120 LKRIHGWIEVDGTWDVKDAPIQNPYTAETCYELSHCMTCGCCLEACPNVGPQSD-FIGPA 178 Query: 195 ILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + +F +RL+ L + + C NC + CPK + + +A++ Sbjct: 179 PTAQTLLFNLHPLGKFDAPKRLNALMEKGGITSCGNSQNCERVCPKSIKLTQHLAQLNRE 238 Query: 254 LLDRKI 259 + + + Sbjct: 239 VNKQAL 244 >gi|228471683|ref|ZP_04056456.1| fumarate reductase, iron-sulfur protein [Capnocytophaga gingivalis ATCC 33624] gi|228276836|gb|EEK15531.1| fumarate reductase, iron-sulfur protein [Capnocytophaga gingivalis ATCC 33624] Length = 249 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 88/249 (35%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K M Y V + L+ L + ++ + + CREGI Sbjct: 6 TLKIWRQK-DAKSKGQMVEYKVTNISDHMSFLEMLDILNEQLIEKGEEPVAFDHDCREGI 64 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF-- 132 CG C + I+G C M+ K + P VIKDL+VD S F Sbjct: 65 CGMCSLFINGEAHGPDRGITTCQLHMRMFKDGDTITIEPWRATAFPVIKDLIVDRSAFER 124 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + D + C+ C C +C NS L Sbjct: 125 IQQAGGYISVNTSGNTQDANAIPIPKRDADRSMDAAACIGCGACVATCK----NSSAMLF 180 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L R E L+ + + C C CPKG++ + IA++ Sbjct: 181 VAAKVSQFALLPQGRVEATERVLNMVNQMEHEGFGNCTNTGACEVECPKGISL-ENIARL 239 Query: 251 KMMLLDRKI 259 L I Sbjct: 240 NREYLKASI 248 >gi|88604280|ref|YP_504458.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanospirillum hungatei JF-1] gi|88189742|gb|ABD42739.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanospirillum hungatei JF-1] Length = 481 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 20/233 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++ R+NPD P ++ + V++++ G VL+ L I ++ DPTL R SCR G CGS Sbjct: 3 VSVQVARFNPDTDAEPRLEPWTVEVED-GARVLNVLDAIHSR-DPTLAYRSSCRAGQCGS 60 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C + ++G LAC ++ + + + PL + V+KDL+VD+ Sbjct: 61 CAVRVNGEPVLACTEEAR---DGMVIEPLD-LPVMKDLMVDL--------VSGISSIPRI 108 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +L E+ ++I L +C+ C C + CP+ +LGP + R +D R Sbjct: 109 HTCECGILPKQEEIERIKPLRDCIECLSCVSICPAMKVTD--FLGPTSMRSQMRIALDPR 166 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 + R L+ C + C + CPK + P KAI K++ + + Sbjct: 167 EPGNRIREAL---SQGLFTCTSCNRCWRVCPKDIETPGKAIEKLREIANREGL 216 >gi|163942247|ref|YP_001647131.1| succinate dehydrogenase iron-sulfur subunit [Bacillus weihenstephanensis KBAB4] gi|163864444|gb|ABY45503.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus weihenstephanensis KBAB4] Length = 253 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + + + ++ L+ I K + Sbjct: 2 SEKTIRLIITRQD-GPDAQEFDQEFEIPY-RPNMNIISALMEIRRNPVDSKGNQTTPIAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ +++DL VD S ++ Sbjct: 60 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPIVRDLQVDRSRMFNAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|256789513|ref|ZP_05527944.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] gi|289773406|ref|ZP_06532784.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] gi|289703605|gb|EFD71034.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces lividans TK24] Length = 248 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 87/246 (35%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADADGA--MSTYQVDGISSDMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGAAPEAHATPVPKPDADVAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVGQMDAEGFGGCTLTGECATACPKGIPLV-SITSMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|291302677|ref|YP_003513955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290571897|gb|ADD44862.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Stackebrandtia nassauensis DSM 44728] Length = 247 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 86/248 (34%), Gaps = 22/248 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R + K M TY VD + L+ L + + + + CREG Sbjct: 3 ITLRIWRQS-GPKVAGAMTTYKVDDVSPDMSFLEVLDVLNEDLTLRGEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+CG+ I+G C M+ + P V+KDLVVD S F Sbjct: 62 ICGACGVVINGDPHGPSRTTTCQLHMRQFDDGDVIDVEPWRANAFPVVKDLVVDRSGFDR 121 Query: 135 QH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 T S A D EC+ C C +CP N L Sbjct: 122 IIGAGGYISAPTGSAPDAHATPVPKPDADLAFDNAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L + E L+ + D C C +CPKG+ P ++I + Sbjct: 178 AAKVTHLNTLPQGQPERAQRVLNMVNVMDEEDFGGCTLAGECATACPKGI-PFESIGNLN 236 Query: 252 MMLLDRKI 259 L + Sbjct: 237 REFLKASL 244 >gi|21219441|ref|NP_625220.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces coelicolor A3(2)] gi|6580636|emb|CAB63171.1| putative reductase iron-sulfur protein [Streptomyces coelicolor A3(2)] Length = 248 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 87/246 (35%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADADGA--MSTYQVDGISSDMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGAAPEAHATPVPKPDADLAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVGQMDAEGFGGCTLTGECATACPKGIPLV-SITSMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|302545343|ref|ZP_07297685.1| fumarate reductase, iron-sulfur protein [Streptomyces hygroscopicus ATCC 53653] gi|302462961|gb|EFL26054.1| fumarate reductase, iron-sulfur protein [Streptomyces himastatinicus ATCC 53653] Length = 252 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 90/248 (36%), Gaps = 24/248 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R P+ G + Y ++ + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQRGPEEPGA--LSVYEIEDISPEMSFLEMLDTLNERLILRGEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+CGM I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACGMVINGQAHGPERTTTCQLHMRHFRDGDTIDVEPWRAAAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 S T S A EC+ C C +CP N L Sbjct: 122 IIGSGGFVSAPTGSAPEAHATPVPKPVADTAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + LD + D C C +CPKG+ P ++I+ + Sbjct: 178 SAKVTHLNVLPQGQPERESRVLDMVGTMDAEGFGGCTNTGECAVACPKGI-PLQSISTMN 236 Query: 252 MMLLDRKI 259 L + Sbjct: 237 REFLRASL 244 >gi|326334851|ref|ZP_08201052.1| fumarate reductase subunit B [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692888|gb|EGD34826.1| fumarate reductase subunit B [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 250 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R +++ M Y V+ + L+ L + ++ + + CREGI Sbjct: 7 TLKVWRQK-NSQEKGRMVEYKVNNISDHMSFLEMLDILNEQLIEQGEEPIAFDHDCREGI 65 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF-- 132 CG C + I+G C M+ K + P VIKDL+VD S F Sbjct: 66 CGMCSLFINGEAHGPDRGITTCQLHMRMFKDGDTITIEPWRSTAFPVIKDLMVDRSAFER 125 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + D + C+ C C +C NS L Sbjct: 126 IQQAGGYISVNTSGNTQDANAIPIPKRDADRSMDAAACIGCGACVATCK----NSSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L R E L+ + + C C CPKG++ + IA++ Sbjct: 182 VAAKVSQFALLPQGRVEATERVLNMVNQMEHEGFGNCTNTGACEVECPKGISL-ENIARL 240 Query: 251 KMMLLDRKI 259 L I Sbjct: 241 NREYLKASI 249 >gi|237756144|ref|ZP_04584715.1| fumarate reductase iron-sulfur subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691688|gb|EEP60725.1| fumarate reductase iron-sulfur subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 236 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 8/208 (3%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 TY ++ +L+ L IKN DP+L+ R CR ICG+C + ++ LAC + Sbjct: 11 YQTYEINNIEDRTTILEVLEQIKNYQDPSLSYRAQCRASICGTCAVKVNSQTVLACKTKV 70 Query: 105 KD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 KD + I + PL +M VIKDLVVD F ++ + + WL P ED Sbjct: 71 KDLAVNDEIVIEPLSNMPVIKDLVVDHDEFLNKLKKAKAWLIPKEP----FEKVYPEDLA 126 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 D +C++C C + CP++ N + GP ++ +R+ D D ER+ Sbjct: 127 TYDRETDCILCGICYSVCPAF-TNDKDFGGPINFVKIFRFWKDKNDALNDERIQTAA-EN 184 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C CT SCPK + + I ++ Sbjct: 185 NITSCIHCKYCTFSCPKQIPVEEDILQL 212 >gi|46581078|ref|YP_011886.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450499|gb|AAS97146.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234755|gb|ADP87609.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris RCH1] Length = 239 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 17/236 (7%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 ++++R P DT+ V + VLD L I+ IDPTL R SC CG+ Sbjct: 6 VTFKVFRCAPG-GEASRFDTFEVAVPGH-ASVLDALDAIRVDIDPTLVYRHSCHHSSCGT 63 Query: 88 CGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 C M I+G + LAC+ + ++G + + PL + + DL+VDM FY R + Sbjct: 64 CAMRINGRDRLACITPAHEAAAESSVQGTVTLEPLRGLPLQGDLMVDMRAFY---RHFDE 120 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW---NSDRYLGPAILLQ 198 T+ P + ++ L C+ C CC ++CP + + GPA+L Sbjct: 121 HWSTLRPSEGRAQAALPAGIERFTRLENCIECGCCVSACPVTGTETGDGTSFAGPAVLAA 180 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + R E L L P C + C+++CP G+ PA+AI ++ M Sbjct: 181 VRREM--GRGPDVPEGLAALAFGPHGEQHCQRHLACSRACPNGVYPARAIMDLRRM 234 >gi|13021830|gb|AAK11557.1|AF299117_3 putative fumarate reductase iron-sulfur protein subunit FrdB [Desulfitobacterium dehalogenans] Length = 250 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 12/238 (5%) Query: 26 NLKEYRIYRWN-PDNKGNPCMDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 + ++ R N PD + + V ++ +C + + + K + Sbjct: 5 KIVRLKVRRQNAPDQPA--FWEEFAVVYSPKMNIISCLMEIQKNPVNAQGKATNPVVWEC 62 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C MNI+G AC + ++ I + PL +++DL+VD + + + Sbjct: 63 NCLEEVCGACTMNINGQARQACSALVDHLEQPIVLEPLRKFPILRDLMVDRTMMFENLKR 122 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + W+ + E DR L +C+ C CC SCP S ++GPA + Sbjct: 123 VHAWIDIDGTYDLGPGPRMAEVDRLWAYELSKCMTCGCCMESCPQVNSRSR-FIGPAAVS 181 Query: 198 QAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 QA + RL L + C NC ++CPK + ++A I + Sbjct: 182 QARLFNTHPSGAMHKHIRLSALMGDGGITDCGNAQNCVRACPKEVPLTTSLADINREV 239 >gi|159905974|ref|YP_001549636.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus maripaludis C6] gi|159887467|gb|ABX02404.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus maripaludis C6] Length = 494 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 21/237 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K + I K + V G VLD L YI + R SCR G CG Sbjct: 1 MKTFTIT-----VKKTEGFKKFEVPA---GLTVLDALEYINKTYGENIQFRSSCRAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC + I+ + LAC ++D + + PL VI DLVVD +Y + ++ +++ Sbjct: 53 SCAVMINKKSRLACKTKVEDN---MIIEPLEGFDVISDLVVDREPYYKKIGTLRNYIQKK 109 Query: 147 SPKPAKELLQ----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + K ++E L ++ + + + C+ C C CP+ ++ Y GP ++ Q R+ Sbjct: 110 NEKISEEDLNKLKLYPDELKDVKKIRGCIDCLSCIAMCPARKYSD--YPGPTLMRQLARF 167 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D +DE E D +Y C T C + CPK ++ A+ K++ + Sbjct: 168 AFDPKDELNRE--KEAFDEN-IYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFAKG 221 >gi|134299721|ref|YP_001113217.1| succinate dehydrogenase iron-sulfur subunit [Desulfotomaculum reducens MI-1] gi|134052421|gb|ABO50392.1| succinate dehydrogenase subunit B [Desulfotomaculum reducens MI-1] Length = 248 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 10/237 (4%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV------LDGLLYIKNKIDPTLTLRR 78 + +I R + D + + + ++ + K + + Sbjct: 2 SKMVSLKIKRQS-DVSTAAYWEEFMIPYKEKMNVISLLKEIQKNPVNAKGEATTPVVWEC 60 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C M I+G AC + ++ I + PL +++DL+VD S + + Sbjct: 61 NCLEEVCGACTMLINGKARQACSALVDQLQQPIVLEPLSKFPLVRDLMVDRSIMFDHLKK 120 Query: 139 IEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ L+ + ++ + C+ C CC +CP+ + +++GPA L Sbjct: 121 VKAWIPIDGTYDLGPGLRMAQRVQEDSYPISRCMTCGCCLEACPNVN-SKSKFIGPAPLA 179 Query: 198 QAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + Q ERLD + + C NC + CPK + AK IA++ Sbjct: 180 QVKLFNSHPTGAMNQEERLDAIMGVGGITDCGNAQNCVKVCPKQIPLAKTIAQLNRD 236 >gi|84497805|ref|ZP_00996602.1| succinate dehydrogenase [Janibacter sp. HTCC2649] gi|84381305|gb|EAP97188.1| succinate dehydrogenase [Janibacter sp. HTCC2649] Length = 247 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 87/253 (34%), Gaps = 33/253 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW P + L Y++ +PD +D L+ G D Sbjct: 6 KIWRQTGPNDQGGLVTYQVSDISPDMSFLEMLDVLNETLNAKG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 + CREGICG CG+ I G C M+ K + P +I+D Sbjct: 52 IAFDSDCREGICGMCGLMISGHAHGPEKTTTCQLHMRSFKDGETITVEPWRAEAFPIIRD 111 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD F +S T S A + + EC+ C C +CP Sbjct: 112 LVVDRGAFDRIIQSGGYISANTGSAPDAHAAPVPKDKADRAFMAAECIGCGACVAACP-- 169 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGL 241 N+ L + L + E + + D C I C+ +CPKG+ Sbjct: 170 --NASGMLFMGAKITHLGELPQGQPERDARVVSMVNQHDHEGFGGCTNIGACSSACPKGI 227 Query: 242 NPAKAIAKIKMML 254 P I+++ L Sbjct: 228 -PQDVISQLNKDL 239 >gi|52140987|ref|YP_085842.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus E33L] gi|196044721|ref|ZP_03111955.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus 03BB108] gi|206977755|ref|ZP_03238646.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus H3081.97] gi|217961999|ref|YP_002340569.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH187] gi|218905740|ref|YP_002453574.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus AH820] gi|222097982|ref|YP_002532039.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Q1] gi|51974456|gb|AAU16006.1| succinate dehydrogenase iron-sulfur protein [Bacillus cereus E33L] gi|196024209|gb|EDX62882.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus 03BB108] gi|206744056|gb|EDZ55472.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus H3081.97] gi|217067194|gb|ACJ81444.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus AH187] gi|218535356|gb|ACK87754.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus AH820] gi|221242040|gb|ACM14750.1| succinate dehydrogenase iron-sulfur protein [Bacillus cereus Q1] gi|324328408|gb|ADY23668.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 253 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + + + ++ L+ I K + Sbjct: 2 SEKTIRLIITRQD-GPDAQAFDQEFEIPY-RPNMNIISALMEIRRNPVDSKGNKTTPIAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 60 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|42783689|ref|NP_980936.1| succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 10987] gi|42739618|gb|AAS43544.1| succinate dehydrogenase, iron-sulfur protein [Bacillus cereus ATCC 10987] Length = 253 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTL 76 + I R + + + ++ L+ I K + Sbjct: 2 SEKTIRLIITRQD-GPDAQAFDQEFEIPY-RPNMNIISALMEIRRNPVDAKGNKTTPIAW 59 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 60 DMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNAL 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA Sbjct: 120 KRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAP 178 Query: 196 LLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 179 LSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 237 >gi|219848483|ref|YP_002462916.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chloroflexus aggregans DSM 9485] gi|219542742|gb|ACL24480.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chloroflexus aggregans DSM 9485] Length = 260 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 85/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW K Y + NPD +D +L G + Sbjct: 6 KIWRQKNRSTPGEFKTYVMDNVNPDMSFLEMLDVLNEELIMKG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ + P +IK Sbjct: 52 VAFDHDCREGICGMCSLMINGVAHGPKNAITTCQLHMRSFNDGDTITVEPWRASAFPIIK 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + T S A + + C+ C C +CP Sbjct: 112 DLVVDRSAFDRIIQAGGYISVSTGSAPDANTIPVPKTAADRAMDAAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E ++ + D C I C CPK Sbjct: 171 ---NGSAMLFTAAKVTHLALLPQGQPERYQRVVNMVAQADFEGFGNCTNIGECAAVCPKE 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + IA++ L+ + Sbjct: 228 ISL-ETIAQLNRDLVMAAL 245 >gi|291456568|ref|ZP_06595958.1| putative iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium breve DSM 20213] gi|291381845|gb|EFE89363.1| putative iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium breve DSM 20213] Length = 316 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 55/266 (20%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK IDPTL R SC G+CGS I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTIDPTLAFRYSCGHGMCGSDAAAINGTPTLLC 111 Query: 101 VKDMKDIKGA-----------------------------------------IAVYPLPHM 119 ++D I + LP Sbjct: 112 TATVRDWAKQPSTAPEVDDEGFRRTGDETANEPDVPAENVENNIPEGSLGVIELASLPGF 171 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDGLYECV 171 +DL+ D+ +Q R + P+L+ E LQ+ E K + L C+ Sbjct: 172 PPQRDLIADIDPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYETLSNCI 231 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C +CP Y D ++GPA L+ A R++ DSRD +R+D ++ + C ++ Sbjct: 232 ACGVCEGACPVY-AGGDAFVGPAALIWASRFINDSRDTKAMDRMDAIDTADGVAGCQSVR 290 Query: 232 NCTQSCPKGLNPAK----AIAKIKMM 253 C++ CP+G++ + +AK++ Sbjct: 291 ACSRHCPRGIDVGEEMWQIVAKVRER 316 >gi|331698358|ref|YP_004334597.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudonocardia dioxanivorans CB1190] gi|326953047|gb|AEA26744.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pseudonocardia dioxanivorans CB1190] Length = 251 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 85/243 (34%), Gaps = 23/243 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +++R + D M +Y VD + L+ L + K+ + + CREGIC Sbjct: 5 LKVWRQH-DADDRGAMRSYDVDDASPDMSFLELLDVLNEKLTTEGEEPVAFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G+C M IDG C ++ + + P V+KDLVVD S F Sbjct: 64 GACSMVIDGQPHGPEKATTTCQLHLRHFRDGDTITVEPFRAGSFPVVKDLVVDRSAFDRI 123 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + T S A + + + C+ C C +CP N L Sbjct: 124 IAAGGYVSAPTGSAPDAHAVPVPKDQADRAFTAAACIGCGACVAACP----NGSASLFLG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E L + D C C +CPK + P I+++ Sbjct: 180 AKITHLGELPQGQPERDSRVLAMVAEHDAAGFGGCTNTGECADACPKEI-PLDVISQLNR 238 Query: 253 MLL 255 L Sbjct: 239 DYL 241 >gi|302555715|ref|ZP_07308057.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] gi|302473333|gb|EFL36426.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces viridochromogenes DSM 40736] Length = 248 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 89/249 (35%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NADADGTMSTYEVDGISPDMSFLEMLDTLNEELIVKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + + P VIKDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFEDGDTIDVEPWRASAFPVIKDLVVDRSAFDRI 122 Query: 136 HRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T + A D EC+ C C +CP N L + Sbjct: 123 IQAGGYITAPTGAAPEAHATPVPKPDADLAFEHAECIGCGACVAACP----NGAAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKINHLNVLPQGAPERETRVLDMVEQMDEEGFGGCTLAGECATACPKGIPLM-SITSMNK 237 Query: 253 MLLD--RKI 259 L RK+ Sbjct: 238 EWLRAARKV 246 >gi|311900546|dbj|BAJ32954.1| putative succinate dehydrogenase iron-sulfur protein [Kitasatospora setae KM-6054] Length = 242 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 82/245 (33%), Gaps = 24/245 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R PD G M Y V + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQQGPDTPGE--MTEYRVSGISEDMSFLEMLDTLNEELILRGERPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+CGM I+G C M+ + P V++DL+VD S Sbjct: 62 ICGACGMVINGQAHGPERTTTCQLHMRHFTDGDTIDVEPWRAGAFPVVRDLMVDRSALDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 S T S A E EC+ C C +CP N L Sbjct: 122 IIGSGGYVTAPTGSAPEAHATPVPKEAADLAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L E + + D C C +CPKG+ IA++ Sbjct: 178 AAKVVHLNVLPQGAPERASRVRNMVGAMDDEGFGGCTNTGECATACPKGIPLTG-IARLN 236 Query: 252 MMLLD 256 L Sbjct: 237 REFLR 241 >gi|163847440|ref|YP_001635484.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chloroflexus aurantiacus J-10-fl] gi|222525289|ref|YP_002569760.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chloroflexus sp. Y-400-fl] gi|163668729|gb|ABY35095.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449168|gb|ACM53434.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 260 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 88/259 (33%), Gaps = 34/259 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW K Y + NPD +D DL + G + Sbjct: 6 KIWRQKNRNTPGEFKTYVMDNVNPDMSFLEMLDVLNEDLMSRG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ K + P ++K Sbjct: 52 VAFDHDCREGICGMCSLMINGVAHGPKNAITTCQLHMRSFKDGDTITVEPWRASAFPILK 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + T S A + S + C+ C C +CP Sbjct: 112 DLVVDRSAFDRIIQAGGYISVSTGSAPDANTIPVSKVAADRAMDAAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E ++ + D C I C CPK Sbjct: 171 ---NGSAMLFTAAKVTHLALLPQGQPERYQRVVNMVAQADFEGFGNCTNIGECAAVCPKE 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + IA++ L+ + Sbjct: 228 ISL-ETIAQLNRDLVMAAL 245 >gi|255536107|ref|YP_003096478.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacteriaceae bacterium 3519-10] gi|255342303|gb|ACU08416.1| Succinate dehydrogenase iron-sulfur protein [Flavobacteriaceae bacterium 3519-10] Length = 255 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 90/260 (34%), Gaps = 35/260 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + Y+I + D+ +D +L N G Sbjct: 12 KIWRQKNNKSKGQFETYKISDVSTDSSFLEMLDMLNENLINDGI--------------EP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ K ++ P VIK Sbjct: 58 IAFDHDCREGICGMCSLYINGRAHGPDTGITTCQLHMRMFKDGETIHIEPWRSAAFPVIK 117 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DLVVD S F + + + A +L ED K C+ C C +C Sbjct: 118 DLVVDRSAFERIMAAGGFISVNTSGNTLDANAILVPKEDADKAMDAAACISCGACVATCK 177 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N L + Y L R E + L+ + D C I C CPK Sbjct: 178 ----NGSAMLFVGAKVSQYALLPQGRVEAKRRVLNMVKAMDEEGFGNCSNIGACEVECPK 233 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ + + Sbjct: 234 GISL-ENIARMNREFMSANL 252 >gi|302538194|ref|ZP_07290536.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. C] gi|302447089|gb|EFL18905.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. C] Length = 246 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 86/246 (34%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R NPD G M +Y VD + L+ L + + + + CREG Sbjct: 4 TLRVWRQQNPDAPGA--MASYEVDGISKDMSFLEMLDTLNEDLILRGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFADGDTIDVEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGSAPEAHATAVPKPAADSAFEHAECIGCGACVAACP----NGSAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +IA + Sbjct: 178 SAKINHLNVLPQGSPERETRVLDMVARMDDEGFGGCTLTGECATACPKGIPLP-SIAAMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|29833851|ref|NP_828485.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces avermitilis MA-4680] gi|29610976|dbj|BAC75020.1| putative succinate dehydrogenase iron-sulfur protein (complex II) [Streptomyces avermitilis MA-4680] Length = 249 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 87/246 (35%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQQNADADGA--MSTYEVDDISADMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFEDGDTIDIEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGAAPEAHATAVPKPDADFAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKINHLNVLPQGAPERETRVLDMVTQMDEEGFGGCTLAGECATACPKGIPLV-SITGMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|118479668|ref|YP_896819.1| succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis str. Al Hakam] gi|118418893|gb|ABK87312.1| succinate dehydrogenase subunit B [Bacillus thuringiensis str. Al Hakam] Length = 261 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 12/241 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTL 74 + I R + + + ++ L+ I K + Sbjct: 8 NMSEKTIRLIITRQD-GPDAQAFDQEFEIPY-RPNMNIISALMEIRRNPVDSKGNKTTPI 65 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ Sbjct: 66 AWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFN 125 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++ W+ + E RQ L +C+ C C SCP+ SD ++GP Sbjct: 126 ALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGP 184 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A L QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 185 APLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNR 244 Query: 253 M 253 Sbjct: 245 D 245 >gi|312796837|ref|YP_004029759.1| succinate dehydrogenase iron-sulfur protein [Burkholderia rhizoxinica HKI 454] gi|312168612|emb|CBW75615.1| Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) [Burkholderia rhizoxinica HKI 454] Length = 105 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 70/105 (66%), Positives = 89/105 (84%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +QS E+R ++DGLYEC++CA CSTSCPS+WWN D+++GPA LLQAYR++ DSRD+ GER Sbjct: 1 MQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSRDQATGER 60 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 LDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK +++ R + Sbjct: 61 LDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV 105 >gi|284033414|ref|YP_003383345.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kribbella flavida DSM 17836] gi|283812707|gb|ADB34546.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Kribbella flavida DSM 17836] Length = 249 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 13/236 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++R++R + + + Y N G +VLD + ++ P L +R +C+ G CGSC Sbjct: 6 KFRVWRGDAEGGD---LQDYE-VEVNEGEVVLDVIHRLQATQTPDLAVRWNCKAGKCGSC 61 Query: 89 GMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 I+G L C+ M + V P+ V++DLV D+S+ Y++ R + + Sbjct: 62 SAEINGQPKLMCMCRMNTFGEDEVVTVTPMRTFPVVRDLVTDVSYNYTKAREVPAFTPPA 121 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL 203 KP E D ++ +C+ C C +C + N + + GP L++ Sbjct: 122 DLKPG-EYRMQQVDVERSQEFRKCIECFLCQNTCHVIRDHEENKESFSGPRFLMRIAELD 180 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 + D +R ++ L C+ CT+ CP+ + A+ +K ++DRK Sbjct: 181 MHPLDAA--DRQQEAQEQHGLGFCNITKCCTEVCPEHIKITDNALIPLKERVVDRK 234 >gi|332876985|ref|ZP_08444738.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685093|gb|EGJ57937.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 250 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R +++ M Y V + L+ L + ++ + + CREGI Sbjct: 7 TLKVWRQK-NSQEKGRMVDYKVTNISDHMSFLEMLDVLNEQLIEQGEEPVAFDHDCREGI 65 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF-- 132 CG C + I+G C M+ K + P VIKDL+VD + F Sbjct: 66 CGMCSLFINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPWRATAFPVIKDLMVDRTAFER 125 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + D + C+ C C +C NS L Sbjct: 126 IQQAGGYISVNTSGNTQDANAIPIPKRDADRSMDAAACIGCGACVATCK----NSSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L R E L+ + + C C CPKG++ + IA++ Sbjct: 182 VAAKVSQFALLPQGRVEATERVLNMVNQMEHEGFGNCTNTGACEVECPKGISL-ENIARL 240 Query: 251 KMMLLDRKI 259 L I Sbjct: 241 NREYLKASI 249 >gi|222151564|ref|YP_002560720.1| succinate dehydrogenase iron-sulfur protein subunit [Macrococcus caseolyticus JCSC5402] gi|222120689|dbj|BAH18024.1| succinate dehydrogenase iron-sulfur protein subunit [Macrococcus caseolyticus JCSC5402] Length = 254 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLR 77 + + I R D P +T+ + + + K + +T Sbjct: 2 AEKSIKLIIKRQK-DANSAPYDETFVIPYRPNMNVIAALMEIQRNPINDKGEKTTPVTWD 60 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD + + + Sbjct: 61 MNCLEEVCGACSMVINGKARQSCSAIIDTLEQPIRLEPMATFPVIRDLQVDRTKMFDNLK 120 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ + E RQ L +C+ C C CP+ + +++G + Sbjct: 121 RVKAWIPIDGTYDLGAGPRMPEKKRQTAYELSKCMTCGVCLEVCPNVN-KNSKFMGAQPI 179 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + + ERL L L C NC +CPKG+ +IA + Sbjct: 180 SQVRLFNLHPTGSMNKDERLHALMGEGGLAECGNSQNCVTACPKGIPLTTSIAAMNRE 237 >gi|213961688|ref|ZP_03389954.1| fumarate reductase, iron-sulfur protein [Capnocytophaga sputigena Capno] gi|213955477|gb|EEB66793.1| fumarate reductase, iron-sulfur protein [Capnocytophaga sputigena Capno] Length = 250 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R +++ M Y V + L+ L + ++ + + CREGI Sbjct: 7 TLKVWRQK-NSQEKGRMVDYKVTNISDHMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGI 65 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF-- 132 CG C + I+G C M+ K + P VIKDL+VD + F Sbjct: 66 CGMCSLFINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPWRATAFPVIKDLIVDRTAFER 125 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + D + C+ C C +C NS L Sbjct: 126 IQQAGGYISVNTSGNTQDANAIPIPKRDADRSMDAAACIGCGACVATCK----NSSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L R E L+ + + C C CPKG++ + IA++ Sbjct: 182 VAAKVSQFALLPQGRVEATERVLNMVNQMEHEGFGNCTNTGACEVECPKGISL-ENIARL 240 Query: 251 KMMLLDRKI 259 L I Sbjct: 241 NREYLKASI 249 >gi|225012111|ref|ZP_03702548.1| ferredoxin [Flavobacteria bacterium MS024-2A] gi|225003666|gb|EEG41639.1| ferredoxin [Flavobacteria bacterium MS024-2A] Length = 248 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 84/260 (32%), Gaps = 35/260 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W E ++ Y I +PD MD L G Sbjct: 6 KVWRQANAEAKGRMETYPIADVSPDMSFLEMMDVLNEQLMGQGI--------------DP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG C M I+G C M+ + P VIK Sbjct: 52 IAFDHDCREGICGMCSMFINGEAHGPDRLVTTCQLHMRKFNDGDTITIEPFRAKAFPVIK 111 Query: 124 DLVVDMSHFYS--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL VD S F Q + + + A + D K C+ C C +C Sbjct: 112 DLTVDRSSFDRVQQAGGFVSVNTSGNTQDANSIPIDKHDADKAFDAAACIGCGACVATCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N+ L + + Y L + E ++ + D C C CPK Sbjct: 172 ----NASAMLFVSAKVSQYALLPQGKVEATDRVMNMVKQMDEEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L + Sbjct: 228 GISL-ENIARMNREYLYASL 246 >gi|256819085|ref|YP_003140364.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Capnocytophaga ochracea DSM 7271] gi|315224505|ref|ZP_07866332.1| fumarate reductase subunit B [Capnocytophaga ochracea F0287] gi|256580668|gb|ACU91803.1| succinate dehydrogenase/fumarate reductase iron- sulfur subunit [Capnocytophaga ochracea DSM 7271] gi|314945526|gb|EFS97548.1| fumarate reductase subunit B [Capnocytophaga ochracea F0287] Length = 250 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R +++ M Y V + L+ L + ++ + + CREGI Sbjct: 7 TLKVWRQK-NSQEKGRMVDYKVTNISDHMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGI 65 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF-- 132 CG C + I+G C M+ K + P VIKDL+VD + F Sbjct: 66 CGMCSLFINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPWRATAFPVIKDLMVDRTAFER 125 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + + A + D + C+ C C +C NS L Sbjct: 126 IQQAGGYISVNTSGNTQDANAIPIPKRDADRSMDAAACIGCGACVATCK----NSSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L R E L+ + + C C CPKG++ + IA++ Sbjct: 182 VAAKVSQFALLPQGRVEATERVLNMVNQMEHEGFGNCTNTGACEVECPKGISL-ENIARL 240 Query: 251 KMMLLDRKI 259 L I Sbjct: 241 NREYLKASI 249 >gi|308811801|ref|XP_003083208.1| Succinate dehydrogenase, Fe-S protein subunit (ISS) [Ostreococcus tauri] gi|116055087|emb|CAL57483.1| Succinate dehydrogenase, Fe-S protein subunit (ISS) [Ostreococcus tauri] Length = 189 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 73/140 (52%), Positives = 99/140 (70%), Gaps = 3/140 (2%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 K ++ +++YRWNPD+ P TY VD+ CGPM+LD L IK++ D TL+ RRSCREGI Sbjct: 44 KEIQRFKVYRWNPDSGEEPRYKTYDVDVGECGPMMLDVLFKIKDEQDQTLSFRRSCREGI 103 Query: 85 CGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW- 142 CGSC MNI+G N LAC+ + G + PLPHM V++DLVVDM++FY+Q++SIEP+ Sbjct: 104 CGSCAMNINGKNGLACLTKVDRGQSGDQTIAPLPHMFVVRDLVVDMANFYAQYKSIEPFL 163 Query: 143 -LKTVSPKPAKELLQSHEDR 161 K+ +P KE LQ+ EDR Sbjct: 164 KTKSDAPADGKERLQTKEDR 183 >gi|159898256|ref|YP_001544503.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159891295|gb|ABX04375.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 259 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + I+R + + K M +Y + + L+ L + ++ + + CREGI Sbjct: 4 KLHIWRQD-NAKTAGKMVSYDANHVSPDMSFLEMLDVLNQELITKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C M I+G C M+ K VY P VIKDL VD + Sbjct: 63 CGACSMVINGIPHGPQRATTTCQLHMRSFKDGDEVYIEPWRAEPFPVIKDLAVDRAALDR 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T SP + S E C+ C C +CP N L Sbjct: 123 IIAAGGFISVGTGSPPDGNAIPISKEISDLAMDAAACIGCGACVAACP----NGSAMLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L E ++ + D C C +CPK ++ + IAK+ Sbjct: 179 AAKVSHLNLLPQGEPEKDQRVINMVAQMDAEGFGNCTNYAECQAACPKEISI-QFIAKMN 237 Query: 252 MMLLDRKI 259 L+ K+ Sbjct: 238 RDLIRAKL 245 >gi|117165112|emb|CAJ88666.1| putative reductase iron-sulfur protein [Streptomyces ambofaciens ATCC 23877] Length = 249 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 90/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADADGA--MSTYVVDGISRDMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRAAAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGAAPEAHAAPVPKPDADFAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVAQMDDEGFGGCTLAGECATACPKGIPLM-SITSMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|300775959|ref|ZP_07085818.1| succinate dehydrogenase [Chryseobacterium gleum ATCC 35910] gi|300505092|gb|EFK36231.1| succinate dehydrogenase [Chryseobacterium gleum ATCC 35910] Length = 255 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 86/258 (33%), Gaps = 35/258 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + Y+I + D+ +D +L N G Sbjct: 12 KIWRQKNSKTKGQFETYKISDVSTDSSFLEMLDILNENLINEGK--------------EP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ K + P VIK Sbjct: 58 IAFDHDCREGICGMCSLYINGRAHGPDTGITTCQLHMRMFKDGETIVIEPWRSAAFPVIK 117 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD S F + + + A + ED + C+ C C +C Sbjct: 118 DLMVDRSAFDRVMAAGGFISVNTSGNTLDANAIPVPKEDADRAMDAAACIGCGACVATCK 177 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N L + Y L R E + L+ + D C C CPK Sbjct: 178 ----NGSAMLFVGAKVSQYALLPQGRVEAKRRVLNMVKAMDEEGFGNCSNTGACEVECPK 233 Query: 240 GLNPAKAIAKIKMMLLDR 257 G++ + IA++ + Sbjct: 234 GISL-ENIARMNREYMAA 250 >gi|297190324|ref|ZP_06907722.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] gi|197722422|gb|EDY66330.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 248 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 87/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R M TY VD + L+ L + + + + CREGI Sbjct: 4 NLRIWRQK-SADTPGAMTTYEVDGISSDMSFLEMLDTLNEDLILRGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFRDGDTIDVEPWRAAAFPVVKDLVVDRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T S A D EC+ C C +CP N L + Sbjct: 123 IQAGGYISAPTGSAPDAHATPVPKPDADFAFEHAECIGCGACVAACP----NGSAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +IA + Sbjct: 179 AKVNHLNVLPQGAPERETRVLDMVRAMDDEGFGGCTLTGECATACPKGIPLP-SIAAMNK 237 Query: 253 MLLD--RKI 259 L RK+ Sbjct: 238 EWLRATRKV 246 >gi|162456592|ref|YP_001618959.1| succinate dehydrogenase iron-sulfur subunit [Sorangium cellulosum 'So ce 56'] gi|161167174|emb|CAN98479.1| Succinate dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 273 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 15/253 (5%) Query: 20 APTGEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KID 71 P GE L R+ R + D + + + V V+ L I+ K Sbjct: 17 QPKGEGRLVHLRVRRQDTADRTESRRWEEFKVPY-LPQMNVISALQQIQKDPRTVDGKEV 75 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA---IAVYPLPHMSVIKDLVVD 128 + C E +CGSC M I+G AC + + I + P+ +++DL+VD Sbjct: 76 APVVWEAVCLEEVCGSCTMVINGRVRQACSALIDQLAPKGEVITLEPMSKFPLVRDLLVD 135 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK-IDGLYECVMCACCSTSCPSYWWNS 187 S + + + W+ + +RQ+ L C+ C CC +CP Y + Sbjct: 136 RSRMFEDMKRVRAWIDIDGTHELGPGPRESPERQQERYPLSRCMTCGCCVEACPQYN-DG 194 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +++G + + + ERL+++ + C NC + CPK + + Sbjct: 195 TKFVGAFAINLVRLYNMHPSGAMHEGERLESVMSEGGITDCGKSQNCVEVCPKEIPLVDS 254 Query: 247 IAKIKMMLLDRKI 259 +A + R + Sbjct: 255 LAAVSRDTTKRML 267 >gi|86132507|ref|ZP_01051101.1| succinate dehydrogenase iron-sulfur protein [Dokdonia donghaensis MED134] gi|85817068|gb|EAQ38252.1| succinate dehydrogenase iron-sulfur protein [Dokdonia donghaensis MED134] Length = 248 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 87/260 (33%), Gaps = 35/260 (13%) Query: 16 KIWNAPTG--EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + + Y I + D MD + N+ + Sbjct: 6 KIWRQKSAQAKGQMVTYPIDGIDGDMSFLEMMDVLN--------------NKLINEGEEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICGSC M I+G C M+ K + P VIK Sbjct: 52 VVFDHDCREGICGSCSMFINGEAHGPDRLVTTCQLHMRKFKDGETITIEPFRADGFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD S F + + + + A + D C+ C C SC Sbjct: 112 DLMVDRSAFDRIQHAGGFISVNTSGNTQDANSIPIEKADADDAFAAATCIGCGACVASCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N+ L + + + L + E L+ + D C C CPK Sbjct: 172 ----NASAMLFVSAKVSQFALLPQGQVEATDRVLNMVKQMDEEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L + Sbjct: 228 GISL-ENIARMNREYLSASL 246 >gi|239978093|ref|ZP_04700617.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces albus J1074] gi|291449992|ref|ZP_06589382.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces albus J1074] gi|291352941|gb|EFE79843.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces albus J1074] Length = 249 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 84/245 (34%), Gaps = 22/245 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NADEPGAMSTYQVDDISQDMSFLEMLDTLNEELTLKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + P VIKDLVVD + F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFSDGDTIDIEPWRASAFPVIKDLVVDRTAFDRV 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +S T + A D EC+ C C +CP N L A Sbjct: 123 IQSGGYISAPTGTAPEAHATPVPKPDADYAFENAECIGCGACVAACP----NGSAMLFTA 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKVSHLNVLPQGAPERESRVLDMVATMDAEGFGGCTLAGECATACPKGIPLF-SITNMNK 237 Query: 253 MLLDR 257 L Sbjct: 238 EWLRA 242 >gi|46447475|ref|YP_008840.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Protochlamydia amoebophila UWE25] gi|46401116|emb|CAF24565.1| probable succinate dehydrogenase iron-sulfur protein [Candidatus Protochlamydia amoebophila UWE25] Length = 257 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%) Query: 30 YRIYRWNPDNKGNPCMDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83 +IYR P G+ + + + ++ + + + IK + + C E Sbjct: 8 LKIYRGEP---GSQYWEEFELALIPYANVISSLMEIQRNPINIKGEKVKPVVWESGCLEE 64 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-----IAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +CGSC M I+ AC ++ I I + PL +++DL+VD S + + Sbjct: 65 VCGSCSMLINAYPRQACTALIEPILNETKNLIITLAPLTKFPLVRDLIVDRSRMFENLKK 124 Query: 139 IEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + W+ E ++ + L C+ C CCS +CP +S ++GPA + Sbjct: 125 VHAWIDVDGTYQQGPGPNIGPEKQKVMYSLATCMTCGCCSEACPQVNMHS-PFIGPAAIS 183 Query: 198 QAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q + + + Q E RL L + C NC + CPK + +IA I + Sbjct: 184 QVRLFNANPIGKTQKEKRLRPLMQEGGVNDCGNNQNCVRVCPKDIPLTDSIATISRDVTK 243 Query: 257 RKI 259 + I Sbjct: 244 QAI 246 >gi|260061202|ref|YP_003194282.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Robiginitalea biformata HTCC2501] gi|88785334|gb|EAR16503.1| succinate dehydrogenase [Robiginitalea biformata HTCC2501] Length = 248 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 84/246 (34%), Gaps = 24/246 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +I+R D M Y + L+ L + ++ + + CREGIC Sbjct: 5 LKIWRQK-DADSKGKMVDYPISGIEGDMSFLEMLDVLNQQLIDKGEEPVVFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS- 134 GSC + I+G C M+ + P VIKDL++D + F Sbjct: 64 GSCSLQINGEPHGPDRLITTCQLHMRKFNDGDTIVIEPFRATAFPVIKDLMIDRTAFDRI 123 Query: 135 -QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + + A + +D K C+ C C +C N+ L Sbjct: 124 QQAGGYISVNTSGNTVDANAIPIEKDDADKSFNAATCIGCGACVAACK----NASAMLFT 179 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + + L R E + + D C C CPKG++ + IA++ Sbjct: 180 SAKVSQFALLPQGRVEASERVQNMVRQMDLEGFGNCTNTGACEVECPKGISL-ENIARMN 238 Query: 252 MMLLDR 257 L Sbjct: 239 REYLSA 244 >gi|238927860|ref|ZP_04659620.1| succinate dehydrogenase [Selenomonas flueggei ATCC 43531] gi|304438700|ref|ZP_07398638.1| succinate dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884280|gb|EEQ47918.1| succinate dehydrogenase [Selenomonas flueggei ATCC 43531] gi|304368349|gb|EFM22036.1| succinate dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 250 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 10/245 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN------KIDPTLTL 76 E+ + I R + +P + VD +V + KN K P Sbjct: 2 AEQKKVRFIIERQD-GPNESPYTQEFEVDYRPGLNVVASLMEIQKNPVTVDGKRVPPPVW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I V P VI+DL++D S + Sbjct: 61 ECNCLEKVCGACMMVINGRAQQACCALIDNLTQPIRVQPARTFPVIRDLLIDRSVMFESL 120 Query: 137 RSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + I W++ K+ Q+ + L C+ C CC +CP+ SD ++GPA Sbjct: 121 KRIHGWIEVDGTWDVKDAPIQNPYTAETCYELSHCMTCGCCLEACPNVGPQSD-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q + + +F +RL+ L + + C NC + CPK + + +A++ + Sbjct: 180 TAQTLLFNMHPLGKFDAPKRLNALMEKGGITSCGNSQNCERVCPKSIKLTQHLAQLNREV 239 Query: 255 LDRKI 259 + + Sbjct: 240 NKQAL 244 >gi|154507811|ref|ZP_02043453.1| hypothetical protein ACTODO_00293 [Actinomyces odontolyticus ATCC 17982] gi|293190206|ref|ZP_06608702.1| fumarate reductase, iron-sulfur protein [Actinomyces odontolyticus F0309] gi|153797445|gb|EDN79865.1| hypothetical protein ACTODO_00293 [Actinomyces odontolyticus ATCC 17982] gi|292821022|gb|EFF79975.1| fumarate reductase, iron-sulfur protein [Actinomyces odontolyticus F0309] Length = 247 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 89/243 (36%), Gaps = 24/243 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R N P++KG Y V + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQNGPEDKGAIH--EYQVKGISEESSFLEMLDVLNEELFARGEEPIAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-------IAVYPLP--HMSVIKDLVVDMSHFYS 134 ICG CG+ I+G V + I + P +IKDLVV+ S Sbjct: 62 ICGQCGIVINGIAHGPEVTTTCQLHMRSFNDGDVITIEPWRASGFPIIKDLVVNRSALDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T + A +D + C+ C C +CP N+ L Sbjct: 122 IIQAGGYISVNTGAAPDAHATPVPKQDADRAFEAAACIGCGACVAACP----NASAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E ++ L D C I C + CPK + P IA + Sbjct: 178 SAKVTHLGLLPQGKPENYKRVVNMLNQMDEEGFGSCSNIGECAEVCPKQI-PLDVIANLN 236 Query: 252 MML 254 L Sbjct: 237 RQL 239 >gi|324521644|gb|ADY47897.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 171 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 83/136 (61%), Positives = 109/136 (80%), Gaps = 2/136 (1%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSC 180 KDLVVDM+ FY+Q+ I+PWL+ K+ QS ++++KIDGLYEC++CACCSTSC Sbjct: 22 KDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCSTSC 81 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSYWWN+D+YLGPA+L+QAYRW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK Sbjct: 82 PSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTCPKH 141 Query: 241 LNPAKAIAKIKMMLLD 256 LNPAKAI +IKM+L Sbjct: 142 LNPAKAIGEIKMLLTK 157 >gi|294632540|ref|ZP_06711100.1| fumarate reductase, iron-sulfur protein [Streptomyces sp. e14] gi|292835873|gb|EFF94222.1| fumarate reductase, iron-sulfur protein [Streptomyces sp. e14] Length = 249 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 86/245 (35%), Gaps = 22/245 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQK-NAGADGAMFTYQVDDISPDMSFLEMLDVLNEQLILAGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + + P V+KDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRAAAFPVVKDLVVDRSAFDRI 122 Query: 136 HRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T S A D EC+ C C +CP N L + Sbjct: 123 IQAGGYITAPTGSAPEAHATPVPKPDADFAFEHAECIGCGACVAACP----NGAAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKVNHLGVLPQGAPERETRVLDMVAQMDEEGFGGCTLAGECATACPKGIPLV-SITSMNK 237 Query: 253 MLLDR 257 L Sbjct: 238 EWLRA 242 >gi|213692570|ref|YP_002323156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524031|gb|ACJ52778.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458722|dbj|BAJ69343.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 321 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 60/271 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 111 Query: 101 VKDMKDIKGA----------------------------------------------IAVY 114 ++D I + Sbjct: 112 TATIRDWAKQPGAIPEVDDEGFRHTGTESEESDDSAENDANAAADQDSAANGSLGVIELA 171 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDG 166 LP +DL+ D+ +Q R + P+L+ E LQ+ E K + Sbjct: 172 SLPGFPPQRDLIADIDPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYEL 231 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ER+D ++ + Sbjct: 232 LSNCIACGVCEGACPVY-AGGDAFIGPAALIWASRFVNDSRDTKAMERMDAIDTADGVAA 290 Query: 227 CHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +AK++ Sbjct: 291 CQSVRACSRHCPRGIDVGEEMWQIVAKVRER 321 >gi|290955702|ref|YP_003486884.1| reductase iron-sulfur protein [Streptomyces scabiei 87.22] gi|260645228|emb|CBG68314.1| putative reductase iron-sulfur protein [Streptomyces scabiei 87.22] Length = 249 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 85/246 (34%), Gaps = 22/246 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + + M TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLRVWRQR-NADADGAMSTYEVDGISPDMSFLEMLDTLNEELILRGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + IDG C M+ + P V+KDLVVD S F Sbjct: 63 CGACSLVIDGDAHGPERTTTCQLHMRSFSDGDTIDVEPWRAAAFPVVKDLVVDRSAFDRI 122 Query: 136 HRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T + A D EC+ C C +CP N L + Sbjct: 123 IQAGGYITAPTGAAPEAHATAVPKPDADLAFEHAECIGCGACVAACP----NGAAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +I + Sbjct: 179 AKINHLNVLPQGAPERETRVLDMVEQMDAEGFGGCTLAGECATACPKGIPLM-SITSMNR 237 Query: 253 MLLDRK 258 L Sbjct: 238 EWLRAA 243 >gi|296453946|ref|YP_003661089.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium longum subsp. longum JDM301] gi|296183377|gb|ADH00259.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium longum subsp. longum JDM301] Length = 321 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 60/271 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 111 Query: 101 VKDMKDIKGA----------------------------------------------IAVY 114 ++D I + Sbjct: 112 TATIRDWAKQPGAIPEVDDEGFRHTGTESEESDDSAENGANAAADQDSAANGSLGVIELA 171 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDG 166 LP +DL+ D+ +Q R + P+L+ E LQ+ E K + Sbjct: 172 SLPGFPPQRDLIADIDPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYEL 231 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ER+D ++ + Sbjct: 232 LSNCIACGVCEGACPVY-AGGDAFIGPASLIWASRFVNDSRDTKAMERMDAIDTADGVAA 290 Query: 227 CHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +AK++ Sbjct: 291 CQSVRACSRHCPRGIDVGEEMWQIVAKVRER 321 >gi|291517059|emb|CBK70675.1| succinate dehydrogenase subunit B [Bifidobacterium longum subsp. longum F8] Length = 321 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 60/271 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 111 Query: 101 VKDMKDIKGA----------------------------------------------IAVY 114 ++D I + Sbjct: 112 TATIRDWAKQPGAMLEVDDEGFRHTGTETEESDDSAENVANAAAAQNSAANGSLGVIELA 171 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDG 166 LP +DL+ D+ +Q R + P+L+ E LQ+ E K + Sbjct: 172 SLPGFPPQRDLIADIDPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYEL 231 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ER+D ++ + Sbjct: 232 LSNCIACGVCEGACPVY-AGGDAFIGPAALIWASRFVNDSRDTKAMERMDAIDTADGVAA 290 Query: 227 CHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +AK++ Sbjct: 291 CQSVRACSRHCPRGIDVGEEMWQIVAKVRER 321 >gi|89889791|ref|ZP_01201302.1| succinate dehydrogenase/fumarate reductase, iron-sulfur binding subunit [Flavobacteria bacterium BBFL7] gi|89518064|gb|EAS20720.1| succinate dehydrogenase/fumarate reductase, iron-sulfur binding subunit [Flavobacteria bacterium BBFL7] Length = 246 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +I+R +P+ KGN M TY +D + L+ + + ++ + + CREG Sbjct: 4 TLKIWRQASPEAKGN--MVTYPLDGVDGDMSFLEMMDILNEELVNKGEEPVEFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICGSC M I+G C M+ + P VIKDL+VD + F Sbjct: 62 ICGSCNMMINGQPHGPQKLTTTCQLHMRKFNDGDTITIEPWRAAAFPVIKDLIVDRTSFD 121 Query: 134 S--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q + + + + A + + C+ C C +C N+ L Sbjct: 122 RIQQAGAYVSVNTSGNTQDANSIPIEKAKADEAFHSATCIGCGACVAACK----NASAML 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + Y L E + + D C C CPKG+ + IA+ Sbjct: 178 FTSAKVSQYALLPQGEIEATDRVQNMVRQMDIEGFGNCTNTGACMIECPKGIKL-ENIAR 236 Query: 250 IKMMLLDRKI 259 + L + Sbjct: 237 MNSEYLKANV 246 >gi|147677825|ref|YP_001212040.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Pelotomaculum thermopropionicum SI] gi|146273922|dbj|BAF59671.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Pelotomaculum thermopropionicum SI] Length = 212 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 13/214 (6%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 I R+NP Y VD++ VL+ LL + DP L+ RRSCR ICGSC Sbjct: 5 LNIRRFNPAVDVESYFQKYAVDVEEH-CTVLEALLK-AWQQDPGLSFRRSCRSAICGSCA 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++I+G LAC ++D+ G I + PLPH +KDLVVD+ F+ +++ PW+ Sbjct: 63 VSINGKPGLACQTLIRDVAGGGQITLEPLPHFKQLKDLVVDLEPFFESLKAVVPWVVNRD 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E +K++G C++C C + + + PA L++ + D R Sbjct: 123 D---YNGRMAPEQARKLEGPATCILCGVCDAA-----VEGLKGVKPAALVKGLKLAQDPR 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 D R++ ++ P + R I + CPK + Sbjct: 175 DALGDARMEMMKVPAEVLR-LFIKELPEKCPKKI 207 >gi|146298438|ref|YP_001193029.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacterium johnsoniae UW101] gi|146152856|gb|ABQ03710.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacterium johnsoniae UW101] Length = 248 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 88/260 (33%), Gaps = 35/260 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + EY I PD +D L N G + Sbjct: 6 KIWRQKNAQDKGGIVEYPIDGIEPDMSFLEMLDVLNEGLINKG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG C + I+G C M+ K ++ P VIK Sbjct: 52 VAFDHDCREGICGMCSLFINGEAHGPDRGVTTCQLHMRMFKDGDTIFIEPFRAKAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DLVVD S F + + + A + +D K C+ C C +C Sbjct: 112 DLVVDRSSFDRIQHAGGFISVNTSGNTIDANTIPIPKDDADKSFDAAACIGCGACVATCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 NS L + + Y L + E L+ + D C C CPK Sbjct: 172 ----NSSAMLFVSAKVSQYALLPQGKVEATDRVLNMVHQMDLEGFGNCTNTGACEIECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L + Sbjct: 228 GISL-ENIARMNREYLAASL 246 >gi|297582937|ref|YP_003698717.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus selenitireducens MLS10] gi|297141394|gb|ADH98151.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacillus selenitireducens MLS10] Length = 249 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 12/238 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK-------IDPTLTLRR 78 I R + P + + V V+ L+ I+ + Sbjct: 4 KTVHVVITRQDGPFSE-PYEEAFRVPW-RPSMNVISALMEIRRNPVNQDGVETTPVQWES 61 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C E +CG+C M ++G AC + ++ + + PL +DL+VD + + Sbjct: 62 VCLEEVCGACSMLVNGKPRQACSTLIDSLEQPVRLAPLKTFPCERDLMVDRQRMFDALQK 121 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W++ E + E +R+ L +C+ C C +CP+ + ++GPA L Sbjct: 122 VKAWIEIDGTYDMGEGPRMPESERRWAYELSKCMTCGLCFEACPNVH-DRSTFIGPAPLS 180 Query: 198 QAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q + Q ERL+ + L C NC + CPK + +IA++ Sbjct: 181 QVRLFNTHPTGSMQANERLEAIMTEGGLTSCGNAANCAEVCPKEIPLTHSIAQLNKKA 238 >gi|23336268|ref|ZP_00121492.1| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Bifidobacterium longum DJO10A] gi|23465512|ref|NP_696115.1| iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium longum NCC2705] gi|189439543|ref|YP_001954624.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Bifidobacterium longum DJO10A] gi|227545997|ref|ZP_03976046.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621947|ref|ZP_04664978.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482283|ref|ZP_07941304.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium sp. 12_1_47BFAA] gi|322688896|ref|YP_004208630.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. infantis 157F] gi|322690871|ref|YP_004220441.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|23326171|gb|AAN24751.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Bifidobacterium longum NCC2705] gi|189427978|gb|ACD98126.1| Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Bifidobacterium longum DJO10A] gi|227213631|gb|EEI81480.1| succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515138|gb|EEQ55005.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916299|gb|EFV37700.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bifidobacterium sp. 12_1_47BFAA] gi|320455727|dbj|BAJ66349.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320460232|dbj|BAJ70852.1| succinate dehydrogenase iron-sulfur subunit [Bifidobacterium longum subsp. infantis 157F] Length = 321 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 60/271 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 111 Query: 101 VKDMKDIKGA----------------------------------------------IAVY 114 ++D I + Sbjct: 112 TATIRDWAKQPGAMPEVDDEGFRHTGTEAEESDDSAENVANAAAAQNSAANGSLGVIELA 171 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDG 166 LP +DL+ D+ +Q R + P+L+ E LQ+ E K + Sbjct: 172 SLPGFPPQRDLIADIDPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYEL 231 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ER+D ++ + Sbjct: 232 LSNCIACGVCEGACPVY-AGGDAFIGPAALIWASRFVNDSRDTKAMERMDAIDTADGVAA 290 Query: 227 CHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +AK++ Sbjct: 291 CQSVRACSRHCPRGIDVGEEMWQIVAKVRER 321 >gi|86134661|ref|ZP_01053243.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Polaribacter sp. MED152] gi|85821524|gb|EAQ42671.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Polaribacter sp. MED152] Length = 246 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 83/249 (33%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D M Y V + L+ + + ++ + + CREGI Sbjct: 4 TLKIWRQK-DASTKGKMVDYKVTEISEHMSFLEMMDVLNEQLVNSGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P VIKDL VD S F Sbjct: 63 CGMCSMYINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPWRAAAFPVIKDLAVDRSAFDR 122 Query: 135 QHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + + + A + E C+ C C +C NS L Sbjct: 123 IQHAGGYISVNTSGNTQDANAIPIKKEAADTAMDAATCIGCGACVATCK----NSSAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + Y L + E + + D C C CPKG++ IA++ Sbjct: 179 VGAKVSQYALLPQGQVEAADRVRNMVAQMDLEGFGNCTNTGACEVECPKGISL-DNIARM 237 Query: 251 KMMLLDRKI 259 L+ + Sbjct: 238 NRELMKASV 246 >gi|311745848|ref|ZP_07719633.1| fumarate reductase, iron-sulfur protein [Algoriphagus sp. PR1] gi|126576051|gb|EAZ80329.1| fumarate reductase, iron-sulfur protein [Algoriphagus sp. PR1] Length = 249 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 84/247 (34%), Gaps = 22/247 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + TY +D + L+ + + ++ + + CREGI Sbjct: 4 TLKIWRQK-NANDKGGFVTYPIDGISTDMSFLEMMDVLNEELAVKGEDPVHFDHDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKG-------AIAVYPLPH--MSVIKDLVVDMSHFYSQ 135 CG C + I+G + I + P V+KDLVV+ S F Sbjct: 63 CGMCSLYINGHPHGPKQTTTCQLHMRSFSDGDTITIEPWRAAAFPVVKDLVVERSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ + T A E+ + C+ C C +C N+ L + Sbjct: 123 IQAGGYVSVNTGGVPDANEIPIPKRIADEAFDSATCIGCGACVAACK----NASAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + E++ D C C CPKG++ IA++ Sbjct: 179 AKISQLAMLPQGQVERMSRAEKMIAQMDEEGFGACTNTGACEAECPKGISLTN-IARMNR 237 Query: 253 MLLDRKI 259 + Sbjct: 238 EFFSASV 244 >gi|269218925|ref|ZP_06162779.1| fumarate reductase, iron-sulfur protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212036|gb|EEZ78376.1| fumarate reductase, iron-sulfur protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 250 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 22/240 (9%) Query: 33 YRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSC 88 +R N + +T+ +D + L+ L + ++ L CREGICG C Sbjct: 8 WRQN-GPSDSGHFETHTLDNVDEHASFLEMLDVLNEELFDEGKEPLAFDSDCREGICGQC 66 Query: 89 GMNIDGTNT-----LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQHRSI 139 G+ I+G C M+ K + P VIKDLVVD S F ++ Sbjct: 67 GIVINGDPHGPKRTTTCQLHMRTFKDGDTITLEPWRSKGFPVIKDLVVDRSAFDRIVQAG 126 Query: 140 -EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + T + A L + + C+ C C +CP N L + + Sbjct: 127 GYISVNTGAAPEAHSQLVPKGNADRSFEAAACIGCGACVAACP----NGSAMLFTSAKVV 182 Query: 199 AYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L + E + ++ L +D C + C CPK + P + I+ + L+ Sbjct: 183 HLGLLPQGQPERRDRVVNMLAQQDDEGFGGCTNVGACASVCPKEI-PLELISLLNRDLIK 241 >gi|297204089|ref|ZP_06921486.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] gi|197714755|gb|EDY58789.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sviceus ATCC 29083] Length = 249 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 85/246 (34%), Gaps = 24/246 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNAHADGA--MSTYEVDGISSDMSFLEMLDTLNEELILRGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + P VIKDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFSDGDTIDVEPWRASAFPVIKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGAAPEAHATPVPKPDADFAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGAPERETRVLDMVEQMDEEGFGGCTLAGECATACPKGIPLV-SITSMN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KEWLRA 242 >gi|315605951|ref|ZP_07880982.1| fumarate reductase subunit B [Actinomyces sp. oral taxon 180 str. F0310] gi|315312233|gb|EFU60319.1| fumarate reductase subunit B [Actinomyces sp. oral taxon 180 str. F0310] Length = 247 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 88/243 (36%), Gaps = 24/243 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R N PD+KG Y V + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQNGPDDKGAIH--EYQVKGISEESSFLEMLDVLNEELFARGEEPIAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-------IAVYPLP--HMSVIKDLVVDMSHFYS 134 ICG CG+ I+G V + I + P +IKDLVV+ S Sbjct: 62 ICGQCGIVINGIAHGPEVTTTCQLHMRSFNDGDVITIEPWRAEGFPIIKDLVVNRSALDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T + A +D ++ C+ C C +CP N+ L Sbjct: 122 IIQAGGYISVNTGAAPDAHATPVPKQDAERAFEAAACIGCGACVAACP----NASAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + L D C I C CPK + P IA + Sbjct: 178 SAKVTHLGLLPQGKPENYKRVVAMLNQMDEEGFGSCSNIGECAAVCPKQI-PLDVIANLN 236 Query: 252 MML 254 L Sbjct: 237 RQL 239 >gi|254383507|ref|ZP_04998858.1| succinate dehydrogenase [Streptomyces sp. Mg1] gi|194342403|gb|EDX23369.1| succinate dehydrogenase [Streptomyces sp. Mg1] Length = 246 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 84/245 (34%), Gaps = 22/245 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R + + M +Y VD + L+ L + + + + CREGI Sbjct: 4 TLRVWRQH-NADAPGAMASYEVDGISQDMSFLEMLDTLNEDLILRGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG+C + I+G C M+ + P V+KDLVVD S F Sbjct: 63 CGACSLVINGDAHGPERTTTCQLHMRSFADGDTIDVEPWRASAFPVVKDLVVDRSAFDRI 122 Query: 136 HRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T + A EC+ C C +CP N L + Sbjct: 123 IQAGGYITAPTGAAPEAHATPVPKPAADHAFEHAECIGCGACVAACP----NGSAMLFTS 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + LD + D C C +CPKG+ +IA + Sbjct: 179 AKINHLNVLPQGSPERESRVLDMVATMDDEGFGGCTLTGECATACPKGIPLP-SIAAMNK 237 Query: 253 MLLDR 257 L Sbjct: 238 EWLRA 242 >gi|323489947|ref|ZP_08095168.1| succinate dehydrogenase iron-sulfur subunit [Planococcus donghaensis MPA1U2] gi|323396243|gb|EGA89068.1| succinate dehydrogenase iron-sulfur subunit [Planococcus donghaensis MPA1U2] Length = 256 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 10/238 (4%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLR 77 + I R N N + + + + + + K +T Sbjct: 4 AAKTVIFEIERRN-STDENSYWEKFELPYKMNMNVISALMEIRRNPVNMDGKKTTPVTWD 62 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +C E +CG+C M I+G +C + ++ I + P+ V++DLV+D S + + Sbjct: 63 MNCLEEVCGACSMVINGKARQSCTALVDQLEQPIRLQPMKTFPVVRDLVIDRSRMFDSLK 122 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ W+ E + E RQ L +C+ C C +CP+ SD ++G A L Sbjct: 123 KVKAWVPIDGTHDLGEGPRMPERKRQWAYELSKCMTCGVCLEACPNVNDKSD-FIGAAPL 181 Query: 197 LQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + RL+ + L C NC +SCPKG+ +IA + Sbjct: 182 SQVRLMNAHPTGAMNRDARLNAIMGEGGLASCGNSQNCVESCPKGIPLTTSIAALNRD 239 >gi|229087069|ref|ZP_04219221.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-44] gi|228696262|gb|EEL49095.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-44] Length = 221 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ + + P+ V++DL Sbjct: 18 KGNQTTPVAWDMNCLEEVCGACSMVINGKPRQSCTALIDKLEQPVRIKPMKTFPVVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S + + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFDALKRVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + ERL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKAERLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|258592733|emb|CBE69042.1| Succinate dehydrogenase subunit B [NC10 bacterium 'Dutch sediment'] Length = 247 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 13/236 (5%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + R++R + + Y V+ + G ++LD + ++ P L +R +C+ G CG Sbjct: 3 VVTLRLFRGDAGSGD---FTEYRVEAE-EGMVLLDVIHRLQATQAPDLAVRWNCKAGKCG 58 Query: 87 SCGMNIDGTNTLACVKDMKDIK--GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 SC I+G L C+ M I V P+ +I+DLV D++ Y ++I + Sbjct: 59 SCSAEINGRPRLLCMTQMSLFPSDQPITVAPMRTFPMIRDLVTDVAFNYEVAKTIPAFRP 118 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYR 201 P D +++ ++C+ C C C + N + GP ++ Sbjct: 119 R-PPDSDGTYRMMQADVERVQEFHKCIECFLCQNVCHVIRDHEENKPHFAGPRFFVRIAA 177 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLD 256 + D R + L + C+ CT+ CP+ + AI +K ++D Sbjct: 178 LEMHPLD--THSRTEMLRAKAGIGYCNITKCCTEVCPEQIRITDNAIIPLKERVMD 231 >gi|302562239|ref|ZP_07314581.1| fumarate reductase, iron-sulfur protein [Streptomyces griseoflavus Tu4000] gi|302479857|gb|EFL42950.1| fumarate reductase, iron-sulfur protein [Streptomyces griseoflavus Tu4000] Length = 249 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 87/247 (35%), Gaps = 24/247 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY VD + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADADGA--MSTYEVDGLSPDMSFLEMLDTLNEELILKGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ K + P V+KDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFKDGDTLDVEPWRASAFPVVKDLVVDRSAFDR 121 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A D EC+ C C +CP N L Sbjct: 122 IIQAGGYITAPTGSAPEAHATAVPKPDADLAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKINHLNVLPQGAPERETRVLDMVAQMDEEGFGGCTLAGECATACPKGIPLT-SITGMN 236 Query: 252 MMLLDRK 258 L Sbjct: 237 KEWLRAA 243 >gi|313677337|ref|YP_004055333.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marivirga tractuosa DSM 4126] gi|312944035|gb|ADR23225.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Marivirga tractuosa DSM 4126] Length = 249 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + TY +D + L+ + + ++ + + CREGI Sbjct: 4 NLKIWRQKNNQD-KGAFKTYELDGVSSDMSFLEMIDVLNEQLIDKDEDPVHFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C M I+G C M+ + + P ++KDL VD S F Sbjct: 63 CGMCSMYINGEPHGPLRGVTTCQLHMRSFQDGETITIEPWRAKAFPIVKDLAVDRSAFDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A E+ + C+ C C +C N+ L Sbjct: 123 VIQAGGYVSVNTGGTPDANEIPIPKSVADEAFDAATCIGCGACVAACK----NASAMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + D C C+ CPKG++ + IA++ Sbjct: 179 SAKVSQLSMLPQGKVESAERAQKMVAQMDEEGFGACTNTGACSAECPKGIDLSN-IARMN 237 Query: 252 MMLLDRKI 259 L KI Sbjct: 238 REYLGAKI 245 >gi|188997506|ref|YP_001931757.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932573|gb|ACD67203.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 236 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 8/208 (3%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 TY ++ +L+ L IKN D +L+ R CR ICG+C + ++ LAC + Sbjct: 11 YQTYEINNIEDRTTILEVLEQIKNYQDSSLSYRAQCRASICGTCAVKVNNQTVLACKTKV 70 Query: 105 KD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 KD + I + PL +M VIKDLVVD F ++ + + W P ED Sbjct: 71 KDLAVNDEIVIEPLSNMPVIKDLVVDHDEFLNKLKKAKAWFIPKEP----FEKVYPEDLA 126 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 D +C++C C + CP++ + D + GP ++ +R+ D D R+ Sbjct: 127 TYDRETDCILCGICYSVCPAFANDKD-FGGPINFVKIFRFWKDKNDALNDGRIQIAA-EN 184 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C CT SCPK + I ++ Sbjct: 185 NITSCIHCKYCTFSCPKQIPVEGDILQL 212 >gi|319953137|ref|YP_004164404.1| ferredoxin [Cellulophaga algicola DSM 14237] gi|319421797|gb|ADV48906.1| ferredoxin [Cellulophaga algicola DSM 14237] Length = 246 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 87/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + + M Y V + L+ + + ++ + + CREGI Sbjct: 4 TLKIWRQK-NAQAKGKMVDYKVTEISEHMSFLEMMDVLNEQLINKGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P V+KDL+VD S F Sbjct: 63 CGMCSMFINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPFRAKAFPVLKDLIVDRSSFDR 122 Query: 135 QHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + + + A L S + C+ C C SC N+ L Sbjct: 123 IQHAGGYISVNTSGNTQDANATLISKHAADEAMDAATCIGCGACVASCK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + Y L + E + + D C C CPKG++ + IA++ Sbjct: 179 VGAKVSQYALLPQGQVEATDRVKNMVAQMDLEGFGNCTNTGACEVECPKGISL-ENIARM 237 Query: 251 KMMLLDRKI 259 LL I Sbjct: 238 NRELLKANI 246 >gi|474053|emb|CAA53461.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 180 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 5/157 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 + PTG K +K + IYRWNPD P + Y VDLD+CG MVLD L IK++ DPTLT R Sbjct: 24 SKPTG-KRVKTFEIYRWNPDTPSVKPSLKKYDVDLDDCGSMVLDALNKIKDEQDPTLTFR 82 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQH 136 RSCREGICGSC MNIDG NTLAC+K + ++PLPHM V+KDLV D++ F+ Q+ Sbjct: 83 RSCREGICGSCAMNIDGENTLACIKKINTDTSKSTKIHPLPHMYVMKDLVPDLTLFFEQY 142 Query: 137 RSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECV 171 RSI+PWL+ +P K++ QS ++R+++D LYEC+ Sbjct: 143 RSIQPWLQKKTPLKLGDKQMFQSEKERERLDMLYECI 179 >gi|320101992|ref|YP_004177583.1| succinate dehydrogenase subunit B [Isosphaera pallida ATCC 43644] gi|319749274|gb|ADV61034.1| succinate dehydrogenase subunit B [Isosphaera pallida ATCC 43644] Length = 271 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 93/261 (35%), Gaps = 26/261 (9%) Query: 18 WNAPTGEKNLK--EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI---- 70 + G I+R + PD G M Y ++ + L+ L + ++ Sbjct: 13 HASANGHGKTLNLTLHIWRQSGPDAPG--RMVPYKLEGVSTDCSFLEMLDLLNEQLILKG 70 Query: 71 DPTLTLRRSCREGICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSV 121 + + CREGICG CG+ I+G C M+ + +Y P V Sbjct: 71 EDPIAFEHDCREGICGCCGVVINGHPHGPEQTTTCQLHMRSFQDGAELYIEPWRAKAFPV 130 Query: 122 IKDLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 IKDLVVD S F ++ T S A +L E+ + C+ C C +C Sbjct: 131 IKDLVVDRSAFDRIIQAGGYISTNTGSAPEANSILVKKEEAEAAFNAATCIGCGACVAAC 190 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCP 238 P N+ L A + + L + E + D C C +CP Sbjct: 191 P----NASAMLFVAAKVAHFAHLPQGQIESSRRARAMVAQMDQEGFGNCTNHGECEAACP 246 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 KG++ I + L + Sbjct: 247 KGISL-DNIVLLNREYLKASL 266 >gi|91215515|ref|ZP_01252486.1| succinate dehydrogenase [Psychroflexus torquis ATCC 700755] gi|91186467|gb|EAS72839.1| succinate dehydrogenase [Psychroflexus torquis ATCC 700755] Length = 248 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 83/245 (33%), Gaps = 24/245 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGL----LYIKNKIDPTLTLRRSCREGI 84 +I+R D K Y VD + L+ L + + + CREGI Sbjct: 4 NLKIWRQE-DAKDKGGFQNYKVDGIDGDMSFLEMLDVLNNTLVEEGVDPVEFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CGSC + I+G C M+ K + P VIKDLV+D S F Sbjct: 63 CGSCSLQINGEPHGPDRRVTTCQLHMRKFKDGDDIVIEPFRATAFPVIKDLVIDRSAFDR 122 Query: 135 -QHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 QH + T + +D C+ C C +C N+ L Sbjct: 123 IQHAGGYISVNTSGNTQDANSIPIEKDNADDSFYAATCIGCGACVAACK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + + L E L + D C C CPKG++ + IA++ Sbjct: 179 TAAKVSQFALLPQGEVEAHERVLSMVDQMDKEGFGNCTNTGACEIECPKGISL-ENIARL 237 Query: 251 KMMLL 255 L Sbjct: 238 NREYL 242 >gi|153874468|ref|ZP_02002680.1| succinate dehydrogenase, iron-sulfur protein [Beggiatoa sp. PS] gi|152069071|gb|EDN67323.1| succinate dehydrogenase, iron-sulfur protein [Beggiatoa sp. PS] Length = 250 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 25/250 (10%) Query: 28 KEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 +I+R + + G M Y +D L+ L + ++ + + CRE Sbjct: 3 INLKIWRQASREMPGK--MMDYTLDGIIPELSFLEMLDILNEELLKKGEEPIAFDHDCRE 60 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF 132 GICG+C + I+G +C ++ K +Y P V+KDLVVD S F Sbjct: 61 GICGACSLYINGRPHGPEQGITSCQLHLRSFKDGDTIYVEPWRAKPFPVLKDLVVDRSAF 120 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T S A + +E+ ++ +C+ C C +C N+ L Sbjct: 121 DRIIQAGGYISVNTGSAPDANIIPIPNENVKEAFEAADCIGCGACVAACK----NASAML 176 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + L + E Q + D C C CPK + P IA+ Sbjct: 177 FVAAKVSHLALLPQGQVERQSRVEKMIAQMDKEGFGACTNTGACAFECPKSI-PVSHIAR 235 Query: 250 IKMMLLDRKI 259 + L K+ Sbjct: 236 LNREYLSAKL 245 >gi|15606075|ref|NP_213452.1| fumarate reductase iron-sulfur subunit [Aquifex aeolicus VF5] gi|2983251|gb|AAC06846.1| fumarate reductase iron-sulfur subunit [Aquifex aeolicus VF5] Length = 230 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + +I R++ G+ + Y VD + G VL+ L IK +IDPTL+ R CR GICG+C Sbjct: 2 KVKIKRYS---DGDFRWEEYEVDGE--GKTVLEILQNIK-EIDPTLSFRAMCRAGICGTC 55 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G + LAC + I + P+ IKDLVV+ Y + + W Sbjct: 56 VVKVNGEHKLACNTRV---YDDITLEPVDVAPPIKDLVVEHEFIYEKLKKGRVWF----E 108 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + ++ + + ++C++C C+ CP+ + + + P+ +AY + D R+ Sbjct: 109 PLPTNIPLKPDELKNTEKSWDCILCGICNYVCPAIQADKN-FGLPSTFTKAYGVVFDKRN 167 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++L +L P + C NCT SCPK NP I ++ ++ R + Sbjct: 168 KKGLDKLKDLV-PLNIQSCTHCKNCTFSCPKDCNPELLIKILENNMVQRGL 217 >gi|289427770|ref|ZP_06429481.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J165] gi|289159034|gb|EFD07227.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J165] gi|313807874|gb|EFS46355.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA2] gi|313819659|gb|EFS57373.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL046PA2] gi|313822235|gb|EFS59949.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA1] gi|313823532|gb|EFS61246.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA2] gi|313825859|gb|EFS63573.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL063PA1] gi|314924629|gb|EFS88460.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA3] gi|314962007|gb|EFT06108.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA2] gi|314986442|gb|EFT30534.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA2] gi|314990802|gb|EFT34893.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA3] gi|315083533|gb|EFT55509.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL027PA2] gi|315087213|gb|EFT59189.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA3] gi|327329807|gb|EGE71563.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL096PA3] gi|327446492|gb|EGE93146.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL013PA2] gi|328752248|gb|EGF65864.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL020PA1] gi|332675853|gb|AEE72669.1| succinate dehydrogenase iron-sulfur subunit [Propionibacterium acnes 266] Length = 257 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 89/250 (35%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGIVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + E + D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVEAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|314978898|gb|EFT22992.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL072PA2] gi|315089387|gb|EFT61363.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL072PA1] Length = 257 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 89/250 (35%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGIVINGVPHGGMGVAQPVRTTTCQLHMRSFVDGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + E + D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVEAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|313896329|ref|ZP_07829882.1| succinate dehydrogenase iron-sulfur subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|320530753|ref|ZP_08031797.1| succinate dehydrogenase iron-sulfur subunit [Selenomonas artemidis F0399] gi|312975128|gb|EFR40590.1| succinate dehydrogenase iron-sulfur subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|320137040|gb|EFW28978.1| succinate dehydrogenase iron-sulfur subunit [Selenomonas artemidis F0399] Length = 250 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 10/245 (4%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN------KIDPTLTL 76 E+ + + R + P + V+ +V + KN K P Sbjct: 2 AEQRKVRFIVERQD-GPTEKPYTQEFEVEYRVGLNVVAALMEIQKNPVTIDGKRVPPPVW 60 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 +C E +CG+C M I+G AC + ++ I + P VI+DL++D + + Sbjct: 61 ECNCLEKVCGACMMVINGKAQQACCALVDNLTEPIRLQPARTFPVIRDLLIDRTVMFESL 120 Query: 137 RSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + I W++ +E Q+ + L C+ C CC +CP+ SD ++GPA Sbjct: 121 KRIHGWIEVDGSWDNREAPIQNPYTAETCYELSHCMTCGCCLEACPNVGPQSD-FIGPAP 179 Query: 196 LLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q + + +F +RL+ L + + C NC + CPKG+ + +A++ + Sbjct: 180 TAQTLLFNMHPLGKFDAPKRLNVLMEKGGITSCGNSQNCERVCPKGIKLTQHLAQLNREV 239 Query: 255 LDRKI 259 + + Sbjct: 240 NKQAL 244 >gi|229006846|ref|ZP_04164479.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides Rock1-4] gi|228754468|gb|EEM03880.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides Rock1-4] Length = 221 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ + + P+ V++DL Sbjct: 18 KGNHTTPVAWDMNCLEEVCGACSMVINGKPRQSCTALIDKLEQPVRIKPMKTFPVVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S + + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFDALKRVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + ERL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKAERLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|262340938|ref|YP_003283793.1| succinate dehydrogenase iron-sulfur subunit [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272275|gb|ACY40183.1| succinate dehydrogenase iron-sulfur subunit [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 249 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 85/257 (33%), Gaps = 33/257 (12%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW ++ K Y++Y +PD+ +D L+ + + Sbjct: 6 KIWRQKNNKEKGFFKTYQVYDISPDSSFLEMLD------------FLNNQIICDKEESSA 53 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ +Y P +IK Sbjct: 54 IAFDHDCREGICGMCSLYINGRAHGPDNLITTCQLHMRHFNNGETIYVEPWRAKPFPIIK 113 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD S F S + + K C+ C C +C Sbjct: 114 DLIVDRSSFDRIIISGGFISVNTLGKTIDGNMIPIPKNEADKAFDAATCIGCGACVAACK 173 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N L + + + L + E + L+ + D C C CPK Sbjct: 174 ----NRSAMLFVSAKVSQFALLPQGKIERKRRVLNMVNKMDEEGFGTCTNTQACEAECPK 229 Query: 240 GLNPAKAIAKIKMMLLD 256 G++ + IA + + Sbjct: 230 GIS-TEYIAFMNKEYIR 245 >gi|312132952|ref|YP_004000291.1| frdb [Bifidobacterium longum subsp. longum BBMN68] gi|311773933|gb|ADQ03421.1| FrdB [Bifidobacterium longum subsp. longum BBMN68] Length = 321 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 60/271 (22%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 G + Y + VLD LL IK +DPTL R SC G+CGS + I+GT TL C Sbjct: 53 GKQWVQEYTIPARPSD-TVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLC 111 Query: 101 VKDMKDIKGA----------------------------------------------IAVY 114 ++D I + Sbjct: 112 TATIRDWAKQPGAMPEVDDEGFRHTGTEAEESDDSAENVANAAAAQNSAANGSLGVIELA 171 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--------PKPAKELLQSHEDRQKIDG 166 LP +DL+ D++ +Q R + P+L+ E LQ+ E K + Sbjct: 172 SLPGFPPQRDLIADIAPMLNQIRKLTPYLQADGVLATTAEGKVDVFEYLQNPEQLAKYEL 231 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP Y D ++GPA L+ A R++ DSRD ER+D ++ + Sbjct: 232 LSNCIACGVCEGACPVY-AGGDAFIGPAALIWASRFVNDSRDTKAMERMDAIDTADGVAA 290 Query: 227 CHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 C ++ C++ CP+G++ + +AK++ Sbjct: 291 CQSVRACSRHCPRGIDVGEEMWQIVAKVRER 321 >gi|269125374|ref|YP_003298744.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermomonospora curvata DSM 43183] gi|268310332|gb|ACY96706.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermomonospora curvata DSM 43183] Length = 251 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 86/257 (33%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W P + EY++ +PD +D L G + Sbjct: 6 RVWRQKGPEDAGKMVEYQLDDVSPDMSFLEMLDVLNERLIAEG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ K + P VIK Sbjct: 52 IAFDHDCREGICGMCSLVINGVPHGPERATTTCQLHMRKFKDGDVIDVEPWRAQAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ T S A + EC+ C C +CP Sbjct: 112 DLVVDRSAFDKIIQAGGYISAPTGSAPDAHSIPVPKPAADAAFEAAECIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKG 240 N L A + L + E + ++ D C CT +CPKG Sbjct: 171 ---NGSAMLFTAAKVTHLGLLPQGQPERYDRVVKMVQAHDEAGFGGCTVTGECTVACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + P + I ++ L Sbjct: 228 I-PLETITRLNRDYLAA 243 >gi|228993247|ref|ZP_04153163.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus pseudomycoides DSM 12442] gi|228999291|ref|ZP_04158871.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides Rock3-17] gi|228760488|gb|EEM09454.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides Rock3-17] gi|228766315|gb|EEM14958.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus pseudomycoides DSM 12442] Length = 214 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ + + P+ V++DL Sbjct: 11 KGNHTTPVAWDMNCLEEVCGACSMVINGKPRQSCTALIDKLEQPVRIKPMKTFPVVRDLQ 70 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S + + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 71 VDRSRMFDALKRVKAWVPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 130 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + ERL + L C NC QSCPKG+ Sbjct: 131 KSD-FIGPAPLSQARLFNSHPTGEMHKAERLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 189 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 190 TSIAALNRD 198 >gi|193213659|ref|YP_001999612.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobaculum parvum NCIB 8327] gi|193087136|gb|ACF12412.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobaculum parvum NCIB 8327] Length = 257 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R M TY VD + + L + ++ + + CREGI Sbjct: 4 TLKIWRQKNATD-KGGMVTYKVDAVSPDSSFFEMLDQLNQQLIGKGEDPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C + I+G C M+ + +Y P V+KDL+VD S + Sbjct: 63 CGTCSLYINGRPHGPIRGATTCQLHMRSFRDGETIYVEPWRCGAFPVVKDLIVDRSALDT 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + + A + + C+ C C +CP N+ L Sbjct: 123 IIQAGGYISINSGGVPDANAIPVPKPNADSAFDAAACIGCGACVAACP----NASPMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L R E + + D C C CPK + A I ++ Sbjct: 179 GAKVSHLALLPQGRIEAERRVQQMVAAMDSLGFGFCSNTYACEAECPKEIKIAN-ITRLN 237 Query: 252 MMLLDRKI 259 L K+ Sbjct: 238 REFLAAKL 245 >gi|328760079|gb|EGF73658.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL099PA1] Length = 262 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGIVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|296122700|ref|YP_003630478.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Planctomyces limnophilus DSM 3776] gi|296015040|gb|ADG68279.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Planctomyces limnophilus DSM 3776] Length = 258 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 87/253 (34%), Gaps = 23/253 (9%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLR 77 + +++R P + TY + + L+ L + ++ + + Sbjct: 5 NSDSMKLTVKVWRQ-PATDKPGHLATYEIANISPDMSFLEMLDVLNEQLILKGEEPIAFD 63 Query: 78 RSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVV 127 CREGICG+CG+ I+G C M+ K + P VIKDLVV Sbjct: 64 HDCREGICGTCGIMINGQPHGPDNNTTTCQLHMRRFKNGDTLILEPWRANAFPVIKDLVV 123 Query: 128 DMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 D + F S + T + + ++K C+ C C SC N Sbjct: 124 DRAAFDRIIASGGYVSINTGNAPDGNAIPVPGTMQEKAMENAACIGCGACVASCK----N 179 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L + + L E L + D C C SCP G+ A Sbjct: 180 ASAMLFTSAKVAHLSHLPQGAAERNERVLKMVARMDAEGFGNCTNTGECAASCPAGIPLA 239 Query: 245 KAIAKIKMMLLDR 257 +IA++ + Sbjct: 240 -SIARLNREYIRA 251 >gi|88801628|ref|ZP_01117156.1| succinate dehydrogenase [Polaribacter irgensii 23-P] gi|88782286|gb|EAR13463.1| succinate dehydrogenase [Polaribacter irgensii 23-P] Length = 246 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 86/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K M Y V + L+ + + ++ D + CREGI Sbjct: 4 TLKIWRQV-DAKDKGKMVDYKVTEISGSMSFLEMMDVLNEQLVNAGDEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P VIKDLVV+ S F Sbjct: 63 CGMCSMYINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPWRAAAFPVIKDLVVNRSAFDR 122 Query: 135 QHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + + + A L S + C+ C C +C NS L Sbjct: 123 IQHAGGYISVNTSGNTQDANATLISKKAADTAMDAATCIGCGACVATCK----NSSAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + Y L + E + + D C C CPKG++ IA++ Sbjct: 179 VGAKVSQYALLPQGQVEAADRVRNMVAQMDLEGFGNCTNTGACEVECPKGISL-DNIARM 237 Query: 251 KMMLLDRKI 259 L+ I Sbjct: 238 NRELMKASI 246 >gi|332978131|gb|EGK14867.1| succinate dehydrogenase [Desmospora sp. 8437] Length = 257 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 8/237 (3%) Query: 24 EKNLKEYRIYRWN-PDNKGNPCMDTY----YVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 EK + I R + PD++ + +++ + K + +T Sbjct: 10 EKKTVRFIITRQDSPDSEPYEEEFELEYRPNMTINSSLMEIQRNPYNAKGEKVSPVTWES 69 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C M I+GT AC + ++ I + P+ V++D+V+D + + + Sbjct: 70 NCLEEVCGACSMVINGTPRQACSTLVDSLEQPIRIQPMDTFPVLRDMVIDRNRMFDALKR 129 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ + E +RQ L +C+ C C +CP+ ++GP I+ Sbjct: 130 VKAWIPIDGTYDLGAGPRMPEVERQWRYELSKCMTCGVCLQACPNV-SPRSNFMGPFIVG 188 Query: 198 QAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + E + ER D L L C NC Q+CPKG+ AIA++ Sbjct: 189 QVDLFNSHPTGEMNKEERTDALIGEGGLQECGNSQNCVQACPKGVPLTTAIARMNRE 245 >gi|149024460|gb|EDL80957.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_g [Rattus norvegicus] Length = 180 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 73/95 (76%), Positives = 83/95 (87%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSRDEF ERL L+DPF Sbjct: 80 QDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFS 139 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 LYRCHTIMNCTQ+CPKGLNP KAIA+IK M+ K Sbjct: 140 LYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYK 174 >gi|315104280|gb|EFT76256.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA2] Length = 257 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK-IDGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDGSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|307328316|ref|ZP_07607493.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] gi|306886020|gb|EFN17029.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Streptomyces violaceusniger Tu 4113] Length = 248 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 90/250 (36%), Gaps = 26/250 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N D G M TY +D + L+ L + ++ + + CREG Sbjct: 4 TLRVWRQKNADTPGA--MATYQLDGVSQDMSFLEMLDILNEELIVKGEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 ICG+C + I+G C M+ + + P VIKDLVVD S F Sbjct: 62 ICGACSLVINGDAHGPERTTTCQLHMRSFQDGDTIDIEPWRASAFPVIKDLVVDRSAFDR 121 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A D EC+ C C +CP N L Sbjct: 122 VIQAGGFITAPTGAAPDAHATPVPKADADFAFEHAECIGCGACVAACP----NGAAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L E + LD + D C C +CPKG+ +I + Sbjct: 178 SAKVNHLNVLPQGSPERETRVLDMVSQMDAEGFGGCTLTGECATACPKGIPLF-SITAMN 236 Query: 252 MMLLD--RKI 259 L RK+ Sbjct: 237 KEWLRATRKV 246 >gi|225848453|ref|YP_002728616.1| fumarate reductase iron-sulfur subunit [Sulfurihydrogenibium azorense Az-Fu1] gi|225643359|gb|ACN98409.1| fumarate reductase iron-sulfur subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 236 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 15/223 (6%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++ R + + +++ +L+ L YIKN +DP+L+ R +CR ICG+CG Sbjct: 3 VKVKRED-------YFSEFEINIQEKRITILEVLDYIKNYLDPSLSYRSNCRASICGTCG 55 Query: 90 MNIDGTNTLACVKD--MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 + ++G LAC + + P+ +M +IKDL+VD F + + + W Sbjct: 56 VKVNGKPVLACKTKALDLAENNTLLIEPVDNMPIIKDLIVDQDEFLEKLKKAKAWF---- 111 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +D + +C++C C + CP++ N + GP ++ +R+ D Sbjct: 112 EPRDNFEKVYPQDLALFEKEADCILCGICYSVCPAFQ-NDKNFGGPINFIKIFRFWKDKN 170 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 D R++ + + C CT SCPK + I ++ Sbjct: 171 DALGDVRIEIAK-ENNITSCIHCKYCTFSCPKEIPVESDIMQL 212 >gi|134097763|ref|YP_001103424.1| fumarate reductase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|291008608|ref|ZP_06566581.1| fumarate reductase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|133910386|emb|CAM00499.1| succinate dehydrogenase iron-sulfur protein [Saccharopolyspora erythraea NRRL 2338] Length = 252 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 14/238 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 +R++R + G + Y V+++ G +VLD + I+ P L +R +C+ G CGSC Sbjct: 7 FRVWR---GDAGGGDLGDYTVEVN-EGEVVLDIIHRIQATQAPDLAVRWNCKAGKCGSCS 62 Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 I+G L C+K M + V P+ V+KDLV D+S+ Y++ R + + Sbjct: 63 AEINGRPGLMCMKRMSTFSEDETVTVTPMRTFPVVKDLVCDVSYNYAKAREVPAFRPPEG 122 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLI 204 +P E D Q+ +C+ C C +C + D + GP L++ + Sbjct: 123 LEPG-EYRMQQVDVQRSQEFRKCIECFLCQNTCHVIRDHEDNKQAFSGPRFLMRVAELDM 181 Query: 205 DSRD---EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 D E G R L C+ CT+ CP+ + A+ +K + D + Sbjct: 182 HPLDTHEEAGGHRAAEARGDHGLGLCNITKCCTEVCPEHIQITDNALIPLKERVADHR 239 >gi|324997713|ref|ZP_08118825.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pseudonocardia sp. P1] Length = 249 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R D + TY V+ D L+ L + ++ D + CREGI Sbjct: 4 TLKVWRQR-DAVDKGRLATYDVEAD-EDMSFLEMLDVLNERLILSGDEPVAFDHDCREGI 61 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C M IDG C M+ + P VIKDLVVD F Sbjct: 62 CGACSMVIDGQPHGPQRATTTCQLHMRHYSDGDTIVIEPFRSGSFPVIKDLVVDRGSFDK 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T S A + C+ C C +CP N L Sbjct: 122 IIQAGGYVSANTGSAPEANANAVPKAQADRSFAAANCIGCGACVAACP----NGSASLFL 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPF--RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L L + E ++ +E C C +CPK + P I+++ Sbjct: 178 GAKLTHLGELPQGQPERWERVVNMVETHEDAGFGGCTNTGACATACPKEI-PLDVISQLN 236 Query: 252 MMLLDRKI 259 L + Sbjct: 237 RDYLAATV 244 >gi|194337820|ref|YP_002019614.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194310297|gb|ACF44997.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 257 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 80/259 (30%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + Y + +PD+ +DT L G Sbjct: 6 KIWRQKNATATGEMVSYDVSGISPDSSFFEMLDTLNQKLIMTGG--------------DP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C + I+G C M+ + P VI+ Sbjct: 52 VAFDHDCREGICGTCSLYINGRPHGPVKGVTTCQLHMRSFTDGATINIEPWRAKAFPVIR 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S F ++ + T A + E C+ C C +C + Sbjct: 112 DLIVDRSAFDKIIQAGGYVSVNTGGVPDANTIPVPKEKSDAAFDAATCIGCGACVAACSN 171 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 L + L + E + D C C CPKG Sbjct: 172 AAA----MLFIGAKVSHLALLPQGKVEAAKRVQKMVAAMDALGFGSCSNTYACEAECPKG 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA++ L K+ Sbjct: 228 ISVIN-IARMNRGFLVAKL 245 >gi|282854580|ref|ZP_06263915.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J139] gi|282582162|gb|EFB87544.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J139] gi|314923925|gb|EFS87756.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL001PA1] gi|314966109|gb|EFT10208.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL082PA2] gi|314981882|gb|EFT25975.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA3] gi|315090713|gb|EFT62689.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA4] gi|315094961|gb|EFT66937.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL060PA1] Length = 257 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|149277229|ref|ZP_01883371.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Pedobacter sp. BAL39] gi|149232106|gb|EDM37483.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Pedobacter sp. BAL39] Length = 256 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 84/258 (32%), Gaps = 34/258 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + L +Y++ +PD D L + G D Sbjct: 11 KIWRQKNTKTNGKLVDYKLSEISPDMSFLEMFDVLNEQLISKG--------------DEP 56 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C M I+G C M+ K + P VIK Sbjct: 57 VVFDHDCREGICGACSMFINGRPHGPKEGITTCQLHMRSFKDGDTIVVEPWRAKAFPVIK 116 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD + F + + T + + A L C+ C C +C Sbjct: 117 DLTVDRTAFDRVIAAGGFISVNTGNAQDANSLPIPKVQADSAFEAAACIGCGACVATCK- 175 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + D C C CPKG Sbjct: 176 ---NASAMLFVSAKISQLAQLPQGQPERYRRVQSMVAQMDAEGFGNCTNTGACEAECPKG 232 Query: 241 LNPAKAIAKIKMMLLDRK 258 ++ + IA++ L K Sbjct: 233 ISL-ENIARMNRDFLSAK 249 >gi|86143755|ref|ZP_01062131.1| succinate dehydrogenase [Leeuwenhoekiella blandensis MED217] gi|85829798|gb|EAQ48260.1| succinate dehydrogenase [Leeuwenhoekiella blandensis MED217] Length = 248 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 88/259 (33%), Gaps = 37/259 (14%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + +K Y+I D +D DL N G + Sbjct: 6 KIWRQENAKAKGAMKTYQIDGIEGDMSFLEMLDVLNEDLINKGEVP-------------- 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICGSC + I+G C M+ + P VI Sbjct: 52 VEFDHDCREGICGSCSLQINGEPHGPDRLVTTCQLHMRKFNDGDTITIEPFRATAFPVIT 111 Query: 124 DLVVDMSHFYS--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD + F Q + + A + + D C+ C C +C Sbjct: 112 DLIVDRTAFDRIQQAGGYISVNTSGNTIDANSIPVNKHDADDAFSAATCIGCGACVAACK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL---EDPFRLYRCHTIMNCTQSCP 238 N+ L + + Y L + E ER++N+ D C C CP Sbjct: 172 ----NASAMLFTSAKVSQYALLPQGQVEA-VERVENMVRQMDLEGFGNCTNTGACEIECP 226 Query: 239 KGLNPAKAIAKIKMMLLDR 257 KG++ + IA++ L Sbjct: 227 KGISL-ENIARMNREYLSA 244 >gi|333022988|ref|ZP_08451052.1| putative succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. Tu6071] gi|332742840|gb|EGJ73281.1| putative succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Streptomyces sp. Tu6071] Length = 231 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 80/230 (34%), Gaps = 21/230 (9%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSCGMNIDGTNT--- 97 M TY VD + L+ L + ++ + + CREGICG+C + I+G Sbjct: 1 MVTYEVDSISEDMSFLEMLDTLNEELTLKGEDPVAFDHDCREGICGACSLVINGDAHGPE 60 Query: 98 --LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQHRSI-EPWLKTVSPKP 150 C M+ K + P VIKDL V+ S F +S T + Sbjct: 61 RTTTCQLHMRSFKDGDTIDIEPWRAAAFPVIKDLAVNRSAFDRIIQSGGYISAATGTAPE 120 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 A D EC+ C C +CP N L + + L E Sbjct: 121 AHSTPVPKPDADYAFENAECIGCGACVAACP----NGSAMLFTSAKINHLNVLPQGAPER 176 Query: 211 QGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + LD + D C C +CPKG+ +I + L + Sbjct: 177 ESRVLDMVAQMDTEGFGGCTLTGECATACPKGIPLM-SITNMNREWLRAQ 225 >gi|50842916|ref|YP_056143.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes KPA171202] gi|289426347|ref|ZP_06428090.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes SK187] gi|50840518|gb|AAT83185.1| succinate dehydrogenase iron-sulfur protein [Propionibacterium acnes KPA171202] gi|289153075|gb|EFD01793.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes SK187] gi|313763665|gb|EFS35029.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL013PA1] gi|313794059|gb|EFS42083.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA1] gi|313801446|gb|EFS42697.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA2] gi|313816842|gb|EFS54556.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL059PA1] gi|313839834|gb|EFS77548.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL086PA1] gi|314914667|gb|EFS78498.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA4] gi|314919220|gb|EFS83051.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA1] gi|314920870|gb|EFS84701.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA3] gi|314930548|gb|EFS94379.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL067PA1] gi|314954292|gb|EFS98698.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL027PA1] gi|314957429|gb|EFT01532.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA1] gi|314963587|gb|EFT07687.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL082PA1] gi|314968581|gb|EFT12679.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA1] gi|315079441|gb|EFT51434.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL053PA2] gi|315099292|gb|EFT71268.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL059PA2] gi|315100474|gb|EFT72450.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL046PA1] gi|315106748|gb|EFT78724.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL030PA1] gi|315109091|gb|EFT81067.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL030PA2] gi|327451922|gb|EGE98576.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL092PA1] gi|327455043|gb|EGF01698.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA3] gi|327457669|gb|EGF04324.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL083PA2] gi|328755125|gb|EGF68741.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA1] gi|328758097|gb|EGF71713.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL025PA2] Length = 257 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGAAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|288920409|ref|ZP_06414719.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288348216|gb|EFC82483.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 247 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 80/257 (31%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW P + Y + +PD +D L G + Sbjct: 6 RIWRQRGPEDRGAMVTYELADVSPDMSFLEMLDVLNERLILEG--------------EDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG CGM I+G C M++ + P V++ Sbjct: 52 VAFDHDCREGICGMCGMVINGQAHGPRDRTTTCQLHMREFADGDVIDVEPWRAAAFPVMR 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F S + T S A C+ C C +CP Sbjct: 112 DLVVDRSGFDRIIGSGGYISVVTGSAPEAHSTPVPKPIADAAFDNATCIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L + + L E + D + D C CT +CPKG Sbjct: 171 ---NGSAMLFTSAKVTHLNLLPQGAPERESRVRDMVAQMDEEGFGGCTNTGECTVACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 + +I + L Sbjct: 228 IPLT-SIGNLNREYLRA 243 >gi|295130973|ref|YP_003581636.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Propionibacterium acnes SK137] gi|291375858|gb|ADD99712.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Propionibacterium acnes SK137] gi|313773603|gb|EFS39569.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL074PA1] gi|313811655|gb|EFS49369.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL083PA1] gi|313831396|gb|EFS69110.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL007PA1] gi|313835008|gb|EFS72722.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL056PA1] gi|314974271|gb|EFT18367.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL053PA1] gi|314976724|gb|EFT20819.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL045PA1] gi|314984426|gb|EFT28518.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA1] gi|315081332|gb|EFT53308.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL078PA1] gi|315095411|gb|EFT67387.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL038PA1] gi|327328328|gb|EGE70090.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL096PA2] gi|327444112|gb|EGE90766.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL043PA2] gi|327445009|gb|EGE91663.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL043PA1] Length = 257 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGIVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|227494587|ref|ZP_03924903.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces coleocanis DSM 15436] gi|226832321|gb|EEH64704.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces coleocanis DSM 15436] Length = 247 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 87/244 (35%), Gaps = 24/244 (9%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 +I+R N P+++G M Y V + L+ L + ++ + + CRE Sbjct: 3 ITLKIWRQNGPEDRGA--MHEYKVAGVSEDSSFLEMLDILNEELFLRGEEPIAFDSDCRE 60 Query: 83 GICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 GICG CG+ ++G C M+ K + P VIKDLVVD Sbjct: 61 GICGMCGVVVNGVAHGPEVTTTCQLHMRTFKDGDTITIEPWRATAFPVIKDLVVDRGALD 120 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T + A + + C+ C C +CP N+ L Sbjct: 121 RIIQAGGYVSVNTGAAPDAHATPVPKDKADRAFEAAACIGCGACVAACP----NASAMLF 176 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + L D C I C CPK + P I+ + Sbjct: 177 TSAKVTHLNLLPQGQPENLTRVTNMLAQHDAEGFGTCTNIGECAAVCPKEI-PLDVISTL 235 Query: 251 KMML 254 L Sbjct: 236 NRQL 239 >gi|228903033|ref|ZP_04067172.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis IBL 4222] gi|228910339|ref|ZP_04074155.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis IBL 200] gi|228929562|ref|ZP_04092581.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935825|ref|ZP_04098637.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228941693|ref|ZP_04104240.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228948238|ref|ZP_04110522.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228954784|ref|ZP_04116805.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228967609|ref|ZP_04128632.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228974619|ref|ZP_04135185.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981214|ref|ZP_04141514.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis Bt407] gi|228987765|ref|ZP_04147876.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229019734|ref|ZP_04176539.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1273] gi|229025960|ref|ZP_04182349.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1272] gi|229048220|ref|ZP_04193789.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH676] gi|229072019|ref|ZP_04205229.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus F65185] gi|229093611|ref|ZP_04224712.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-42] gi|229098972|ref|ZP_04229907.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-29] gi|229105139|ref|ZP_04235790.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-28] gi|229118001|ref|ZP_04247361.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock1-3] gi|229124079|ref|ZP_04253271.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus 95/8201] gi|229158123|ref|ZP_04286192.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 4342] gi|228625352|gb|EEK82110.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 4342] gi|228659381|gb|EEL15029.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus 95/8201] gi|228665450|gb|EEL20932.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock1-3] gi|228678320|gb|EEL32546.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-28] gi|228684470|gb|EEL38413.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-29] gi|228689820|gb|EEL43626.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock3-42] gi|228711178|gb|EEL63143.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus F65185] gi|228723207|gb|EEL74583.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH676] gi|228735330|gb|EEL85936.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1272] gi|228741551|gb|EEL91746.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1273] gi|228772039|gb|EEM20494.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228778414|gb|EEM26681.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis Bt407] gi|228785022|gb|EEM33035.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792100|gb|EEM39679.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228804904|gb|EEM51502.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228811596|gb|EEM57933.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228817905|gb|EEM63983.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228823882|gb|EEM69702.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830141|gb|EEM75759.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228849291|gb|EEM94129.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis IBL 200] gi|228856626|gb|EEN01147.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis IBL 4222] Length = 221 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ V++DL Sbjct: 18 KGNQTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|305665708|ref|YP_003861995.1| succinate dehydrogenase [Maribacter sp. HTCC2170] gi|88710467|gb|EAR02699.1| succinate dehydrogenase [Maribacter sp. HTCC2170] Length = 249 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 88/260 (33%), Gaps = 35/260 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW P + + +Y++ + MD L N G + Sbjct: 6 KIWRQKGPQDKGKMVDYKVSDISEHMSFLEMMDVLNEQLVNSG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C ++I+G C M+ K + P VIK Sbjct: 52 VAFDHDCREGICGMCSLHINGEAHGPDRGITTCQLHMRMFKDGDTITIEPWRAKAFPVIK 111 Query: 124 DLVVDMSHF--YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DL+VD F Q + + + A L S + + C+ C C SC Sbjct: 112 DLIVDRMAFERIQQAGGYISVNTSGNTQDANALPISKHNADEAMDAAACIGCGACVASCK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 NS L + + L + E + + D C C CPK Sbjct: 172 ----NSSAMLFVGAKVSQFALLPQGQVEAADRVKNMVAQMDLEGFGNCTNTGACEVECPK 227 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ + IA++ L+ + Sbjct: 228 GISL-ENIARMNRELVKASL 246 >gi|228923258|ref|ZP_04086548.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228960780|ref|ZP_04122418.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|229032160|ref|ZP_04188136.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1271] gi|229081767|ref|ZP_04214260.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock4-2] gi|229111977|ref|ZP_04241521.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock1-15] gi|229129799|ref|ZP_04258766.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-Cer4] gi|229147073|ref|ZP_04275433.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST24] gi|229152708|ref|ZP_04280895.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus m1550] gi|229175223|ref|ZP_04302739.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus MM3] gi|229180780|ref|ZP_04308118.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus 172560W] gi|229192713|ref|ZP_04319672.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 10876] gi|228590803|gb|EEK48663.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus ATCC 10876] gi|228602758|gb|EEK60241.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus 172560W] gi|228608359|gb|EEK65665.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus MM3] gi|228630771|gb|EEK87413.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus m1550] gi|228636461|gb|EEK92931.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST24] gi|228653715|gb|EEL09586.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-Cer4] gi|228671541|gb|EEL26841.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock1-15] gi|228701612|gb|EEL54105.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus Rock4-2] gi|228729166|gb|EEL80166.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH1271] gi|228798915|gb|EEM45891.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228836464|gb|EEM81815.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 214 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ V++DL Sbjct: 11 KGNQTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQ 70 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 71 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 130 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 131 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 189 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 190 TSIAALNRD 198 >gi|254424244|ref|ZP_05037962.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Synechococcus sp. PCC 7335] gi|196191733|gb|EDX86697.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Synechococcus sp. PCC 7335] Length = 248 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 90/249 (36%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +++R + D Y V+ L+ L + ++ + + CREG Sbjct: 3 INLKVWRQS-DPLAVGGFVNYSVEAVEPDLSFLEMLDMLNEQLITQGEVPIEFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG+CGM I+G AC M+ V P VIKDLVVD S F Sbjct: 62 ICGTCGMMINGRAHGPQKRTAACQLYMRHFDEGETVTLEPWRATAFPVIKDLVVDRSAFD 121 Query: 134 S-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +KT + A +L + K C+ C C +CP+ + L Sbjct: 122 RIMMAGGYVSIKTGAAPDANAVLVDKPNADKAFDYATCIGCGACVAACPNASAS----LF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDN--LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + L + E + + C C CP+G++ AIA++ Sbjct: 178 TAAKISHLALLAQGKPERKQRVVKMTKQMTAEGFGDCSNHGECQSVCPQGISI-DAIAQM 236 Query: 251 KMMLLDRKI 259 + + K+ Sbjct: 237 RREYIRAKL 245 >gi|327328014|gb|EGE69783.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL103PA1] Length = 257 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + + + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMVPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|332883492|gb|EGK03775.1| hypothetical protein HMPREF9456_01842 [Dysgonomonas mossii DSM 22836] Length = 251 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 84/249 (33%), Gaps = 25/249 (10%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 +++R P KG +TY +D + L+ L + + + CRE Sbjct: 7 ITLKVWRQRGPQVKGA--FETYSLDGISVDSSFLEMLDILNETLINQGKEPVVFDHDCRE 64 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 GICG C + ++G C M+ K + P VI+DL+VD + F Sbjct: 65 GICGMCSLYVNGHPHGPDEDITTCQLHMRKFKDGETITIEPWRSAGFPVIRDLMVDRNAF 124 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T A + D + C+ C C +C N L Sbjct: 125 DKIIQAGGYVSVNTGGIPDANAIPIPKVDADEAMDSASCIGCGACVAACK----NGSAML 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L R E + D C C CPK ++ + IA+ Sbjct: 181 FVSAKVSQLALLPQGRVEGARRAKAMVAKMDELGFGNCTNTGACEVECPKNISISN-IAR 239 Query: 250 IKMMLLDRK 258 + L K Sbjct: 240 LNREFLSAK 248 >gi|312890771|ref|ZP_07750301.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] gi|311296734|gb|EFQ73873.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] Length = 262 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 80/259 (30%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W E L Y+ +PD +D L + G + Sbjct: 12 KVWRQKNSETPGKLVTYKADGISPDMSFLEMLDVVNESLIHKG--------------EDP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G C M+ + P V+K Sbjct: 58 IHFDHDCREGICGMCSLYINGQPHGPKRAITTCQLHMRSFHDGQTITIEPWRAAAFPVVK 117 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL D S F Q + T A + + C+ C C +C Sbjct: 118 DLATDRSAFDRIQQAGGYVSVNTGGVPDANAIAIPKVIADEAFNSATCIGCGACVAACK- 176 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + + L + E + + + D C C CPK Sbjct: 177 ---NASAMLFVSAKISQFALLPQGQPERYRRAQSMVAQMDAEGFGSCTNTGACEAECPKE 233 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ I ++ L K+ Sbjct: 234 ISLVN-IGRMNNDYLSAKL 251 >gi|320094520|ref|ZP_08026291.1| fumarate reductase subunit B [Actinomyces sp. oral taxon 178 str. F0338] gi|319978546|gb|EFW10118.1| fumarate reductase subunit B [Actinomyces sp. oral taxon 178 str. F0338] Length = 247 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 88/248 (35%), Gaps = 24/248 (9%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R N P++KG Y V + L+ L + ++ + + CREG Sbjct: 4 TLRIWRQNGPEDKGAIH--EYQVKGISEESSFLEMLDVLNEELFERGEEPIAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-------IAVYPLP--HMSVIKDLVVDMSHFYS 134 ICG CG+ I+G V + I + P +IKDLVV+ S Sbjct: 62 ICGQCGVVINGIAHGPEVTTTCQLHMRSFNDGDVITIEPWRAQGFPIIKDLVVNRSALDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A +D ++ C+ C C +CP N+ L Sbjct: 122 IIQAGGYISVNTGGAAAADATPVPKQDAERAFEAAACIGCGACVAACP----NASAMLFT 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + L D C + C CPK + P IA + Sbjct: 178 SAKVTHLGLLPQGKPENYRRVVSMLNQMDEEGFGSCSNVGECAAVCPKQI-PLDVIANLN 236 Query: 252 MMLLDRKI 259 L + Sbjct: 237 RQLGKAAL 244 >gi|327334322|gb|EGE76036.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL097PA1] Length = 257 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 88/250 (35%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ + T + A + + + + C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKGSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|229817796|ref|ZP_04448078.1| hypothetical protein BIFANG_03068 [Bifidobacterium angulatum DSM 20098] gi|229785585|gb|EEP21699.1| hypothetical protein BIFANG_03068 [Bifidobacterium angulatum DSM 20098] Length = 259 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 57/256 (22%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA--- 110 VLD LL IK +DPTL R SC G+CGS + I+GT TL C +KD Sbjct: 5 RPEDTVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLCTATVKDWAKPAGT 64 Query: 111 -----------------------------------------IAVYPLPHMSVIKDLVVDM 129 I + LP V +DL+ D+ Sbjct: 65 AIQTDDEGFRRTDGVDTTADAADAGEPQSASTASDAASLGVIELAALPGFPVQRDLIADI 124 Query: 130 SHFYSQHRSIEPW--------LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 Q + ++P E LQ+ E + + L C+ C C +CP Sbjct: 125 DPMLDQLKKLKPALEADGVLATTKDGKIDVFEYLQNPEQLAQYERLTNCIACGVCEGACP 184 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + D ++GPA L+ + R++ DSRD ER+D ++ + C ++ C++ CP+G+ Sbjct: 185 VF-AGGDAFIGPAALIWSSRFINDSRDVKAAERMDAIDTADGVAACQSVRACSRQCPRGI 243 Query: 242 NPAK----AIAKIKMM 253 + + +AK++ Sbjct: 244 DVGEEMWQIVAKVRER 259 >gi|119355950|ref|YP_910594.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobium phaeobacteroides DSM 266] gi|119353299|gb|ABL64170.1| succinate dehydrogenase subunit B [Chlorobium phaeobacteroides DSM 266] Length = 257 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + + K + TY V + + L + ++ + ++ CREGI Sbjct: 4 TLKIWRQS-NTKAKGGLVTYNVADISAECSFFEMLDILNQQLITSGNDPVSFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C + I+G C M+ + P +++DL+VD S Sbjct: 63 CGTCSLYINGRPHGPLKGITTCQLHMRSFSDGDTITIEPWRAKAFPIVRDLIVDRSALDK 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQK-IDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ P L ++R C+ C C +CP N+ L Sbjct: 123 IIQAGGYISVNTGGIPDANTLPVQKERSDASFDAAACIGCGACVAACP----NASAMLFA 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E + + D C C CPKG++ IA++ Sbjct: 179 GAKVSHLSLLPQGKIEAARRVRNMVACMDELGFGNCSNSYACEAECPKGIS-VSVIARMN 237 Query: 252 MMLLDRKI 259 L K+ Sbjct: 238 REFLGAKL 245 >gi|332663649|ref|YP_004446437.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haliscomenobacter hydrossis DSM 1100] gi|332332463|gb|AEE49564.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haliscomenobacter hydrossis DSM 1100] Length = 262 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 86/247 (34%), Gaps = 22/247 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + +I+R TY +D + L+ L + K+ + + CREGI Sbjct: 7 KLKIWRQGGKFAKKGEFVTYELDDVSEHMSFLEMLDVLNEKLIAQREEPVAFEHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C M I+G C M+ K V P VIKDLVVD F Sbjct: 67 CGTCSMVINGHPHGPNAGTTTCQLHMRFFKDGDTVTIEPFRAKSFPVIKDLVVDREAFDR 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ T + A + E C+ C C +CP N+ L Sbjct: 127 IIQAGGFISASTGQAQDANAIPVPKELASASFDAAACIGCGACVAACP----NASAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + L + D C + C CPK ++ + IA++ Sbjct: 183 SAKVSHLALLPQGKVEAKRRALAMVKQMDLEGFGNCSNVTACEAECPKEIS-VENIARLN 241 Query: 252 MMLLDRK 258 + Sbjct: 242 REYISAA 248 >gi|327543230|gb|EGF29664.1| succinate dehydrogenase iron-sulfur subunit [Rhodopirellula baltica WH47] Length = 284 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 98/269 (36%), Gaps = 36/269 (13%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KID 71 + R+ R + P + + + + V+ L I K Sbjct: 6 PSTKKRPEFINVRVRRQDA-PGKAPYWELHKIKYE-PEMNVISVLQRIAAQSTNRDGKKV 63 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLAC----VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + C E +CGSC M I+G +C + + D I + P+ V++DLVV Sbjct: 64 TPVAWDCGCLEEVCGSCTMVINGRVRQSCSALVDRLLADNADEIVLEPMSKFPVVRDLVV 123 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSY--- 183 D + + ++ W+ S ED+++ L +C+ C CC +CP Y Sbjct: 124 DRARLFQGLERVKAWVPVDSYYNMGAGERILREDQERNYPLSQCMSCGCCVEACPQYNKI 183 Query: 184 ------------------WWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRL 224 S+ ++GP + QA + + GERLD LE P L Sbjct: 184 ELTQKSGETAEEFEARKRQAYSEAFVGPHAISQAMLFNNHPTGKSLAGERLDALEGPGGL 243 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C NC CPK + +IA+ Sbjct: 244 ASCGNAQNCVAVCPKEIPLTTSIARAGRA 272 >gi|158313128|ref|YP_001505636.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Frankia sp. EAN1pec] gi|158108533|gb|ABW10730.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Frankia sp. EAN1pec] Length = 247 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREG 83 RI+R P+++G M TY + + L+ L + + + + CREG Sbjct: 4 TLRIWRQRGPEDRGA--MVTYDLPDVSPDMSFLEMLDVLNERLILEGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG+CG+ I+G C M+ + P V++DLVVD S F Sbjct: 62 ICGACGVVINGQAHGPRDRTTTCQLHMRSFNDGDVIDVEPWRAGAFPVVRDLVVDRSSFD 121 Query: 134 SQH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T S A C+ C C +CP N L Sbjct: 122 RIIGAGGYISVVTGSAPEAHSTPVPKPVADAAFDNATCIGCGACVAACP----NGSSMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L E + + + D C CT +CPKG+ +I + Sbjct: 178 TSAKVTHLNLLPQGAPERETRVRNMVEAMDAEGFGGCTNTGECTVACPKGIPLT-SIGNL 236 Query: 251 KMMLLDR 257 L Sbjct: 237 NREYLRA 243 >gi|325286314|ref|YP_004262104.1| ferredoxin [Cellulophaga lytica DSM 7489] gi|324321768|gb|ADY29233.1| ferredoxin [Cellulophaga lytica DSM 7489] Length = 248 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 85/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D + M Y V + L+ + + ++ + + CREGI Sbjct: 4 TLKIWRQK-DAQSKGKMVDYKVTEISEHMSFLEMMDVLNEQLINSGEEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P V+KDLVVD F Sbjct: 63 CGMCSMYINGEAHGPDRGVTTCQLHMRMFKDGDTITIEPFRAKAFPVLKDLVVDRGAFDR 122 Query: 135 QHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + + + A + S + C+ C C SC NS L Sbjct: 123 IQHAGGYISVNTSGNTQDANAIPISKHAADEAMDAATCIGCGACVASCK----NSSAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + Y L + E + + D C C CPKG++ + IA++ Sbjct: 179 VGAKVSQYALLPQGQVEAVDRVKNMVAQMDLEGFGNCTNTGACEVECPKGISL-ENIARM 237 Query: 251 KMMLLDRKI 259 L I Sbjct: 238 NREFLSANI 246 >gi|32476491|ref|NP_869485.1| succinate dehydrogenase iron-sulfur subunit [Rhodopirellula baltica SH 1] gi|32447036|emb|CAD78942.1| succinate dehydrogenase subunit B [Rhodopirellula baltica SH 1] Length = 284 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 98/269 (36%), Gaps = 36/269 (13%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN-------KID 71 + R+ R + P + + + + V+ L I K Sbjct: 6 PSTKKRPEFINVRVRRQDA-PGKAPYWELHKIKYE-PEMNVISVLQRIAAQSTNRDGKKV 63 Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLAC----VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 + C E +CGSC M I+G +C + + D I + P+ V++DLVV Sbjct: 64 TPVAWDCGCLEEVCGSCTMVINGRVRQSCSALVDRLLADNADEIVLEPMSKFPVVRDLVV 123 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKE-LLQSHEDRQKIDGLYECVMCACCSTSCPSY--- 183 D + + ++ W+ S ED+++ L +C+ C CC +CP Y Sbjct: 124 DRARLFQGLERVKAWVPVDSYYNMGAGERILREDQERNYPLSQCMSCGCCVEACPQYNKI 183 Query: 184 ------------------WWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRL 224 S+ ++GP + QA + + GERLD LE P L Sbjct: 184 ELTQKSDETAEEFEARKRQAYSEAFVGPHAISQAMLFNNHPTGKSLAGERLDALEGPGGL 243 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C NC CPK + +IA+ Sbjct: 244 ASCGNAQNCVAVCPKEIPLTTSIARAGRA 272 >gi|327403487|ref|YP_004344325.1| ferredoxin [Fluviicola taffensis DSM 16823] gi|327318995|gb|AEA43487.1| ferredoxin [Fluviicola taffensis DSM 16823] Length = 254 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 87/252 (34%), Gaps = 24/252 (9%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLR 77 + +I+R + M+TY +D + L+ L + ++ + Sbjct: 2 ASKTININLKIWRQK-NVNSKGSMETYKLDNVSTDSSFLEMLDQLNEQLVNDRQEPIAFD 60 Query: 78 RSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVV 127 CREGICG C + I+G C M+ K +Y P VIKDLVV Sbjct: 61 HDCREGICGMCSLYINGEAHGPDRAVTTCQLHMRKFKDGETIYVEPWRAKAFPVIKDLVV 120 Query: 128 DMSHFYS--QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 D S F Q + A + + K C+ C C SC Sbjct: 121 DRSAFDRIQQAGGFVSVNTSGRTMDANAIPIGKAEADKAFEAATCIGCGACVASCK---- 176 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNP 243 N+ L + + L + E Q L+ + D C C CPK ++ Sbjct: 177 NASAMLFVSAKVSQLALLPQGQVEAQQRVLNMVKQMDEEGFGNCTNTGACAVECPKEISL 236 Query: 244 AKAIAKIKMMLL 255 + IA++ L Sbjct: 237 -ENIARMNREYL 247 >gi|229013715|ref|ZP_04170844.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides DSM 2048] gi|228747637|gb|EEL97511.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus mycoides DSM 2048] Length = 221 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ +++DL Sbjct: 18 KGNQTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPIVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFNALKRVKAWIPIDGTYDLGPGPGMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|228917153|ref|ZP_04080711.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229186748|ref|ZP_04313906.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BGSC 6E1] gi|229198664|ref|ZP_04325365.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus m1293] gi|228584823|gb|EEK42940.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus m1293] gi|228596761|gb|EEK54423.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BGSC 6E1] gi|228842571|gb|EEM87661.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 221 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ V++DL Sbjct: 18 KGNKTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|313158430|gb|EFR57825.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Alistipes sp. HGB5] Length = 247 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 91/247 (36%), Gaps = 23/247 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K +TY V+ + L+ L + N + + CREGI Sbjct: 4 TLKIWRQK-DAKTKGGFETYKVENISADTSFLEMLDILNNNLIHEGKEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGT---NTLACVKDMKDIKG-----AIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG C ++I+G A ++ I + P VIKDLVV+ S + Sbjct: 63 CGMCSLHINGHAHGPGQAATTCQIYMRKFKDGATITIEPWRSAAFPVIKDLVVNRSAYDQ 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T S A + + D ++ C+ C C+ +C N L Sbjct: 123 ILQAGGFISVRTNSVPDANAIPIAQADAEESMDAAACIGCGACAATCK----NGSAMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + + L R E + D C C CPK ++ A IA++ Sbjct: 179 AARVSSLAKLPQGRVEGARRAKAMVAKMDELGFGNCTNTGACQAECPKSISIA-HIARLN 237 Query: 252 MMLLDRK 258 L K Sbjct: 238 REFLSAK 244 >gi|325299217|ref|YP_004259134.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides salanitronis DSM 18170] gi|324318770|gb|ADY36661.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides salanitronis DSM 18170] Length = 251 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R N K DT+ + L+ L + ++ + CREGI Sbjct: 8 TLKIWRQN-GPKEKGHFDTFQMKDIPGDTSFLEMLDILNEQLVEAGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFHDGDVITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGFISVRTGAPQDANAILIPKQVADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMIAKMDELGFGNCTNTRACEAECPKNVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIKAKL 249 >gi|313205440|ref|YP_004044097.1| succinate dehydrogenase subunit b [Paludibacter propionicigenes WB4] gi|312444756|gb|ADQ81112.1| succinate dehydrogenase subunit B [Paludibacter propionicigenes WB4] Length = 251 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 83/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W P + + Y+I + D+ MD L ++ Sbjct: 10 KVWRQAGPKAKGKFETYKINNVSTDSSFLEMMDVLNEQLV--------------SERKEP 55 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C M I+G C M++ + P VIK Sbjct: 56 VAFDHDCREGICGMCSMYINGHPHGPDGEITTCQLHMRNFSDGQTITIEPWRSAAFPVIK 115 Query: 124 DLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S + ++ T + S D + C+ C C+ +C Sbjct: 116 DLMVDRSAYDKIIQAGGYVNVNTGGVPDGNAIPISKIDADEAMDAASCIGCGACAAACK- 174 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L A + L R E + D C C CPK Sbjct: 175 ---NGSAMLFVAAKVSQLALLPQGRVEAAARAKAMVAKMDELGFGNCTNTGACEAECPKN 231 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA++ + K+ Sbjct: 232 VSI-SHIARMNREFIVAKL 249 >gi|261749543|ref|YP_003257229.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497636|gb|ACX84086.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 251 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 85/257 (33%), Gaps = 34/257 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W ++ K Y++ +P++ +D L + K + Sbjct: 10 KVWRQKNSKEKGEFKTYKVDDVSPESSFLEMLD-------------LLNNQILSKKKELP 56 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 ++ CREGICG C + I+G C M+ +Y P +IK Sbjct: 57 ISFDHDCREGICGMCSLYINGRAHGPQDLITTCQLHMRHFNNGETIYIEPWRAKSFPIIK 116 Query: 124 DLVVDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 DLVVD S F S + E+ K C+ C C +C Sbjct: 117 DLVVDRSSFDRIITSGGFISVNTFGKTVDGNMIPIPKENADKAFDAAVCIGCGACVATCK 176 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPK 239 N L + + L + E + L+ + D C C CPK Sbjct: 177 ----NRSAMLFVSAKVAQLALLPQGKIERKKRVLNMVKKMDEEGFGNCTNTQACEIDCPK 232 Query: 240 GLNPAKAIAKIKMMLLD 256 G++ + I+ + + Sbjct: 233 GIS-TENISFMNREYIQ 248 >gi|229062198|ref|ZP_04199521.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH603] gi|228717092|gb|EEL68770.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH603] Length = 221 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ +++DL Sbjct: 18 KGNQTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPIVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|229141246|ref|ZP_04269785.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST26] gi|228642287|gb|EEK98579.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST26] Length = 214 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ V++DL Sbjct: 11 KGNKTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQ 70 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 71 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 130 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 131 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 189 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 190 TSIAALNRD 198 >gi|313836664|gb|EFS74378.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA2] gi|314928171|gb|EFS92002.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL044PA1] gi|314972170|gb|EFT16267.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA3] gi|328907966|gb|EGG27726.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium sp. P08] Length = 257 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRVWRQC-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGVAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ R C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|21675073|ref|NP_663138.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobium tepidum TLS] gi|21648313|gb|AAM73480.1| succinate dehydrogenase, iron-sulfur protein [Chlorobium tepidum TLS] Length = 257 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + M +Y VD + L+ L + ++ + ++ CREGI Sbjct: 4 TLKIWRQK-NADDKGRMVSYKVDDISPDSSFLEMLDQLNQQLIAKGEDPVSFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+CG+ I+G C M+ + + P V+KDL+VD S Sbjct: 63 CGACGLYINGRPHGPLKGITTCQLYMRAFRSGETICVEPWRSGAFPVVKDLIVDRSALDK 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + + A + S D C+ C C +C N+ L Sbjct: 123 IIQAGGYISINSGGLPDANTIPVSKHDADAAFDAAACIGCGACVAAC----SNASPMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L R E + D C C CPK ++ A IA++ Sbjct: 179 GAKVSHLALLPQGRIEAARRVQQMVAAMDALGFGNCSNTYACQAECPKEISIAN-IARMN 237 Query: 252 MMLLDRKI 259 L K+ Sbjct: 238 REFLTAKL 245 >gi|229163503|ref|ZP_04291454.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus R309803] gi|228620072|gb|EEK76947.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus R309803] Length = 221 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ V++DL Sbjct: 18 KGNATTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQ 77 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 78 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 137 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 138 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 196 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 197 TSIAALNRD 205 >gi|229135348|ref|ZP_04264138.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST196] gi|229169241|ref|ZP_04296954.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH621] gi|228614224|gb|EEK71336.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus AH621] gi|228648101|gb|EEL04146.1| Succinate dehydrogenase iron-sulfur subunit [Bacillus cereus BDRD-ST196] Length = 214 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 3/189 (1%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 K + +C E +CG+C M I+G +C + ++ I + P+ +++DL Sbjct: 11 KGNQTTPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPIVRDLQ 70 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWW 185 VD S ++ + ++ W+ + E RQ L +C+ C C SCP+ Sbjct: 71 VDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNS 130 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 SD ++GPA L QA + E + +RL + L C NC QSCPKG+ Sbjct: 131 KSD-FIGPAPLSQARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLT 189 Query: 245 KAIAKIKMM 253 +IA + Sbjct: 190 TSIAALNRD 198 >gi|218780997|ref|YP_002432315.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfatibacillum alkenivorans AK-01] gi|218762381|gb|ACL04847.1| Succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfatibacillum alkenivorans AK-01] Length = 254 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 85/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W P + ++ Y + + D +D DL G Sbjct: 10 KVWRQKGPNDKGVMETYSAQQISTDMSFLEMLDIVNEDLTLSGK--------------EP 55 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG CG ++G C M+ + P V+K Sbjct: 56 IAFDHDCREGICGMCGAMVNGRAHGPEKGTTLCQLHMRHFNDGDTIMIEPWRAMAFKVVK 115 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F S + T + A + +D + +C+ C C SCP Sbjct: 116 DLVVDRSAFDKIIASGGYVSVNTGAAPDANNIPVPADDAELAMDAAQCIGCGACVASCP- 174 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E L L D C C CPK Sbjct: 175 ---NASAMLFTSAKISHLALLPQGKVEADKRVLAMLRCMDEQGFGNCSNERECEAECPKE 231 Query: 241 LNPAKAIAKIKMMLLDRKI 259 +N IA++ L + Sbjct: 232 INITN-IARMNRGFLKAAL 249 >gi|297626592|ref|YP_003688355.1| succinate dehydrogenase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922357|emb|CBL56929.1| Succinate dehydrogenase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 254 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 89/258 (34%), Gaps = 37/258 (14%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 IW G N +K Y+I + D +D L + G + Sbjct: 6 NIWRQAEGADNGAIKTYQIDGISGDTSFLEMLDELNEQLTHQG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT---------LACVKDMKDIKGAIAVYPLPH----MS 120 + CREGICG CG+ I+GT C M+ K + P Sbjct: 52 VAFDSDCREGICGMCGVVINGTAHGRGVSPVRTTTCQLHMRSFKDGDTITIEPWKTPVFP 111 Query: 121 VIKDLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 VIKDLVVD S ++ + T + A + C+ C C + Sbjct: 112 VIKDLVVDRSALDRVVQAGGFISVNTGAAPDAHSTPAPKRQADRAFDNATCIGCGACVAA 171 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSC 237 CP +S L + + L + E + + + D C I C C Sbjct: 172 CP----HSSAMLFTSAKITHLANLPQGQPERKLRVKNMVGQHDAEGFGHCTNIGECAAVC 227 Query: 238 PKGLNPAKAIAKIKMMLL 255 PKG+ P ++I ++ L+ Sbjct: 228 PKGI-PLESINQLNRDLI 244 >gi|317035091|ref|XP_001401064.2| hypothetical protein ANI_1_1422124 [Aspergillus niger CBS 513.88] Length = 182 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 69/101 (68%), Positives = 86/101 (85%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ+YRWL DSRDE E Sbjct: 79 NRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAE 138 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK M+ Sbjct: 139 RKAALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMM 179 >gi|119720032|ref|YP_920527.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermofilum pendens Hrk 5] gi|119525152|gb|ABL78524.1| succinate dehydrogenase subunit B [Thermofilum pendens Hrk 5] Length = 219 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 22/230 (9%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 + R+ + Y VD+D VLD L + + DPTLT +C G+CG+CGM Sbjct: 7 VRRYKQGWREAEYR-AYEVDVD-PDTSVLDALEKVSLEQDPTLTFEHACHHGVCGACGMV 64 Query: 92 IDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 I+G LACV + ++ + V PL V+ DL VD S +SQ+ +EP Sbjct: 65 INGVERLACVTRIGEVARGGVVVVEPLRGFRVVSDLAVDKSRMFSQYALVEP-------- 116 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L+ + +++ L++CV C C ++CP YLGP+++ AYR D + Sbjct: 117 ---GTLERVDGVVELEKLFDCVECGVCYSACPIANTFP-EYLGPSVIALAYRSSKDGKVP 172 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ ++ CH C+ CP G P + I K++ L K+ Sbjct: 173 A------VLDSRRGVWACHAAFECSVRCPVGFKPGETIMKVRRGFLSGKL 216 >gi|149197242|ref|ZP_01874294.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Lentisphaera araneosa HTCC2155] gi|149139788|gb|EDM28189.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Lentisphaera araneosa HTCC2155] Length = 256 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 89/246 (36%), Gaps = 23/246 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 +I+R ++T+ + + L+ L + +K++ + CREGI Sbjct: 11 TLKIWRQK-SRSEKGYIETHEMKGISTEISFLEMLDTLNDKLERSGKAPVVFDHDCREGI 69 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M++ ++ P V++DL VD S F Sbjct: 70 CGMCSLFINGQPHGPAKATTTCQLHMREFSDGQTIFIEPWRSAAFPVVRDLRVDRSSFDR 129 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +S +KT S A + E+ C+ C C +C + + L Sbjct: 130 IIQSGGYTSIKTGSAPDAHAIPVPKENADLAMDAATCIGCGACVAACKNASAS----LFT 185 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L+ + D C C +CPK ++ + IA++ Sbjct: 186 SAKVSQLALLPQGQVERTERALNMVAQMDEEGFGHCTNESECEAACPKEIS-VENIARMN 244 Query: 252 MMLLDR 257 L Sbjct: 245 REYLRA 250 >gi|149024458|gb|EDL80955.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted), isoform CRA_e [Rattus norvegicus] Length = 155 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 95/152 (62%), Positives = 119/152 (78%), Gaps = 3/152 (1%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPL 116 MVLD L+ IKN+ID TLT RRSCREGICGSC MNI+G NTLAC + + G + +YPL Sbjct: 1 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCA 174 PHM VIKDLV D+S+FY+Q++SIEP+LK + ++ LQS EDR+K+DGLYEC++CA Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 120 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 CCSTSCPSYWWN D+YLGPA+L+Q + DS Sbjct: 121 CCSTSCPSYWWNGDKYLGPAVLMQVGVPVSDS 152 >gi|330685723|gb|EGG97359.1| succinate dehydrogenase iron-sulfur subunit [Staphylococcus epidermidis VCU121] Length = 215 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 3/199 (1%) Query: 57 PMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL 116 + + IK + +T +C E +CG+C M I+G +C + ++ I + P+ Sbjct: 1 MEIRRNPVNIKGEKTTPVTWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPM 60 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCAC 175 VI+DL VD S + + ++ W+ + E RQ L +C+ C Sbjct: 61 STFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGV 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCT 234 C CP+ + ++G + Q + + ERLD L L +C NC Sbjct: 121 CLEVCPNV-TQKNDFVGAQAISQVRLFDLHPTGAMTKDERLDALMGAGGLQQCGNSQNCV 179 Query: 235 QSCPKGLNPAKAIAKIKMM 253 +CPKG+ +IA + Sbjct: 180 NACPKGIPLTTSIAAMNRE 198 >gi|325281832|ref|YP_004254374.1| ferredoxin [Odoribacter splanchnicus DSM 20712] gi|324313641|gb|ADY34194.1| ferredoxin [Odoribacter splanchnicus DSM 20712] Length = 253 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 90/248 (36%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K TY V + G L+ L + ++ + + CREGI Sbjct: 10 TLKIWRQK-DAKSKGEFKTYKVHNISTGTSFLEMLDILNEQLVEQNEEPVAFDHDCREGI 68 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C + +DG C M+ + + P VIKDL+VD + Sbjct: 69 CGTCSLFVDGRAHGPDDDVTTCQLHMRRFEDGATITIEPWRCGAFPVIKDLIVDRKAYDK 128 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A + +++ ++ C+ C C+ +C NS L Sbjct: 129 ILQAGGYVSVSTGGVPDANAIPIANDKAEEAMDAAACIGCGACAATCK----NSSAMLFV 184 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + L + E + D C C CPK ++ A IA++ Sbjct: 185 AAKVSQLALLPQGKIEAARRAKAMVAKMDELGFGNCTNTGACEMECPKSISIA-HIARLN 243 Query: 252 MMLLDRKI 259 L K+ Sbjct: 244 REFLKAKL 251 >gi|3851608|gb|AAC72370.1| succinate dehydrogenase Ip subunit [Bos taurus] Length = 139 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 86/139 (61%), Positives = 109/139 (78%), Gaps = 3/139 (2%) Query: 91 NIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 NI+G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK Sbjct: 1 NINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDES 60 Query: 150 P--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSR Sbjct: 61 QGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSR 120 Query: 208 DEFQGERLDNLEDPFRLYR 226 D+F ERL L+DPF LYR Sbjct: 121 DDFTEERLAKLQDPFSLYR 139 >gi|297571877|ref|YP_003697651.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcanobacterium haemolyticum DSM 20595] gi|296932224|gb|ADH93032.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcanobacterium haemolyticum DSM 20595] Length = 247 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 86/240 (35%), Gaps = 22/240 (9%) Query: 33 YRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSC 88 +R + DT+ + + L+ L + ++ + + CREGICG C Sbjct: 8 WRQD-GRGDKGHFDTHTIADVDETASFLEMLDQLNEELFAKGEEPVAFDSDCREGICGQC 66 Query: 89 GMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQHRSI 139 G+ I+G C M+ K + P V+KDLVVD S ++ Sbjct: 67 GIVINGDPHGPLVTTTCQLHMRSFKDGDTITIEPWRSTAFPVLKDLVVDRSALDRIVQAG 126 Query: 140 -EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + T + A + + + C+ C C +CP N L + + Sbjct: 127 GYISINTGAAPDAHAVPVPKDHADRAFEAAACIGCGACVAACP----NGSAMLFTSAKVM 182 Query: 199 AYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L + E ++ L D C + C +CPK + P + I+ + L+ Sbjct: 183 HLGLLPQGQPERLDRVVNMLNQHDSEGFGGCTNVGACAAACPKEV-PLELISMLNRDLMK 241 >gi|325109414|ref|YP_004270482.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Planctomyces brasiliensis DSM 5305] gi|324969682|gb|ADY60460.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Planctomyces brasiliensis DSM 5305] Length = 252 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 86/249 (34%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + I+R + TY +D + L+ L + ++ + + CREG Sbjct: 3 IKLHIWRQS-GRDAQGEFKTYELDNVSPHMSFLEMLDVLNEQLIADKEEPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICGSCG+ I+G C M+ K +Y P V+KDLVVD + F Sbjct: 62 ICGSCGVVINGQPHGPDLETTTCQLHMRRFKDGAEIYIEPWRADSFPVLKDLVVDRTSFD 121 Query: 134 S-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + T + A D C+ C C +C N+ L Sbjct: 122 RIQQAGGFVSVNTGNAPDANSTAVPKRDADLAFDAATCIGCGACVAACK----NASAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + Y L E + D C C +CP G++ K IA++ Sbjct: 178 VSAKVSQYALLPQGGPERPIRVQKMIAQMDKEGFGGCSNTNECEAACPAGIS-VKNIARL 236 Query: 251 KMMLLDRKI 259 + + Sbjct: 237 NREFISASV 245 >gi|3851610|gb|AAC72371.1| succinate dehydrogenase Ip subunit [Mus musculus] Length = 139 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 84/139 (60%), Positives = 109/139 (78%), Gaps = 3/139 (2%) Query: 91 NIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 N +G NTLAC + + + +YPLPHM VIKDLV D+S+FY+Q++SIEP+LK Sbjct: 1 NFNGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDES 60 Query: 149 -KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + ++ LQS EDR+K+DGLYEC++CACCSTSCPSYWWN D+YLGPA+L+QAYRW+IDSR Sbjct: 61 QEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSR 120 Query: 208 DEFQGERLDNLEDPFRLYR 226 D+F ERL L+DPF +YR Sbjct: 121 DDFTEERLAKLQDPFSVYR 139 >gi|296081323|emb|CBI17705.3| unnamed protein product [Vitis vinifera] Length = 328 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 95/146 (65%), Positives = 114/146 (78%), Gaps = 3/146 (2%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117 MVLD L+ IKN++DPTLT RRSCREGICGSC MNIDG N LAC+ + + V PLP Sbjct: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI-PSGESSTVTPLP 59 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCAC 175 HM VIKDLVVDM++FY+Q++SIEPWLK +P P E+ QS +DR K+DG+YEC++CAC Sbjct: 60 HMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPPPTPGKEIPQSKKDRAKLDGMYECILCAC 119 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYR 201 CSTSCPSYWWN + YLGPA LL A R Sbjct: 120 CSTSCPSYWWNPESYLGPAALLHANR 145 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C+ Y + +G + + R W+ DSRDE+ ERLD + D F+LYRCHTI+NC Sbjct: 244 CAFMLSIYHCYTPYSVGMLLNISFIRLWISDSRDEYTKERLDAVCDEFKLYRCHTILNCA 303 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRKI 259 ++CPKGLNP K IA IK + I Sbjct: 304 RACPKGLNPGKQIATIKQRHIADAI 328 >gi|295132113|ref|YP_003582789.1| succinate dehydrogenase [Zunongwangia profunda SM-A87] gi|294980128|gb|ADF50593.1| succinate dehydrogenase [Zunongwangia profunda SM-A87] Length = 230 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 23/231 (9%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSCGMNIDGTNT--- 97 M +Y +D L+ L + ++ + + CREGICG+C + I+G Sbjct: 1 MVSYPIDGIEGDMSFLEMLDVLNEELVAKGEDPVEFDHDCREGICGACSLQINGEPHGPD 60 Query: 98 ---LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS--QHRSIEPWLKTVSP 148 C M+ K + P V+KDL+VD S F Q + + Sbjct: 61 KLITTCQLHMRSFKDGDTIVIEPFRANAFPVVKDLIVDRSSFDRIQQAGGYVSINTSGNT 120 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 A + + D C+ C C +C N+ L + + Y L + Sbjct: 121 IDANSIPVNKHDADDSFAAATCIGCGACVAACK----NASAMLFTSAKVSQYALLPQGQV 176 Query: 209 EFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E ++ + D C C CPKG++ + IA++ L Sbjct: 177 EATDRVMNMVRQMDAEGFGNCTNTGACEIECPKGISL-ENIARMNREYLSA 226 >gi|325105638|ref|YP_004275292.1| ferredoxin [Pedobacter saltans DSM 12145] gi|324974486|gb|ADY53470.1| ferredoxin [Pedobacter saltans DSM 12145] Length = 252 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 81/258 (31%), Gaps = 34/258 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W + Y D +D DL +K K DP Sbjct: 10 KVWRQKNSQTPGKFVTYPANNIADDMSFLEMLDVVNEDL-------------VKKKEDP- 55 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C + I+G+ C M+ K + P V+K Sbjct: 56 IQFDHDCREGICGMCSLMINGSPHGPKQGITTCQLHMRSFKDGDTIVIEPWRAAAFPVLK 115 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD F Q + T A + + EC+ C C +C Sbjct: 116 DLTVDRGSFERIQQAGGYVSVNTGGVPDANTIPIPKRIADEAFSSAECIGCGACVAACK- 174 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + Y L + E + + D C C CPKG Sbjct: 175 ---NASAMLFVSAKVSQYALLPQGQTERYERAIAMVNQMDEEGFGGCTNTYACEAECPKG 231 Query: 241 LNPAKAIAKIKMMLLDRK 258 + IA++ + K Sbjct: 232 IKVTN-IARMNREYFNAK 248 >gi|313813536|gb|EFS51250.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL025PA1] Length = 257 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGAAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ P +Q ++ + C+ C C +CP N Sbjct: 122 RSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKCSDRSFDAATCIGCGACVAACP----NG 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E D C I C CPKG+ P + Sbjct: 178 SSMLFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGI-PLE 236 Query: 246 AIAKIKMMLL 255 +I+++ L+ Sbjct: 237 SISQLNRDLI 246 >gi|261416879|ref|YP_003250562.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373335|gb|ACX76080.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327651|gb|ADL26852.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 258 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 83/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + +I +PD +D + G Sbjct: 9 KIWRQKDAKTKGQFETVKINDVSPDMSFLEMLDIVNEEQMKQGK--------------EG 54 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 CREGICG C + I+G C M+ K + P VI+ Sbjct: 55 FAFDHDCREGICGMCSLVINGMPHGPDHATTTCQLHMRKFKDGDTIVIEPWRAAAFPVIR 114 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D VD + F ++ + T + A + D + C+ C C +C Sbjct: 115 DCAVDRTAFDRIIQAGGFVSVNTGAAPEASTIPVPKADADRAFDAAACIGCGACVAACK- 173 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + +L + E + L + D C + C +CPKG Sbjct: 174 ---NASAMLFVSAKVSHLSFLPQGKVEAKKRVLAMVAQMDKEGFGNCTNLYECQAACPKG 230 Query: 241 LNPAKAIAKIKMMLLDRKI 259 + IAK+ L + Sbjct: 231 I-TVDYIAKMNREYLGATV 248 >gi|255530128|ref|YP_003090500.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pedobacter heparinus DSM 2366] gi|255343112|gb|ACU02438.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pedobacter heparinus DSM 2366] Length = 256 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 78/258 (30%), Gaps = 34/258 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W + L +Y++ +PD D L N G + Sbjct: 11 KVWRQKNNKTKGALVDYKVSDISPDMSFLEMFDVLNEQLINKG--------------EEP 56 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C M I+G C M+ K + P VIK Sbjct: 57 IVFDHDCREGICGMCSMFINGRPHGPKDLVTTCQLHMRSFKDGDTIVVEPWRAKAFPVIK 116 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPS 182 DL VD + F + L + C+ C C +C Sbjct: 117 DLTVDRTAFDRVIAAGGFISVNTGNAQDANNLPIPKIQADAAFEAAACIGCGACVATCK- 175 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + D C C CPKG Sbjct: 176 ---NASAMLFVSAKVSQLAQLPQGQPERYRRVQSMVAQMDAEGFGNCTNTGACEAECPKG 232 Query: 241 LNPAKAIAKIKMMLLDRK 258 ++ + IA++ K Sbjct: 233 ISL-ENIARMNRDFYSAK 249 >gi|329943307|ref|ZP_08292081.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Chlamydophila psittaci Cal10] gi|328814854|gb|EGF84844.1| succinate dehydrogenase and fumarate reductase iron-sulfur family protein [Chlamydophila psittaci Cal10] Length = 238 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 6/196 (3%) Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI-----KGAIAVYPLPHMSVIK 123 + + + C E +CGSC + ++G AC +++ I + PL +I+ Sbjct: 26 ETVNPVVWEQGCLEEVCGSCSLLVNGVPRQACTALIEEYIRETGSREIVLAPLTKFPLIR 85 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL+VD S + + I+ W+ + S E+++ + L C+ C CC+ +CP Sbjct: 86 DLIVDRSIMFDNLQKIQGWVAADVDGEHSGVKVSQEEQELMYALSMCMTCGCCTEACPQI 145 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ++D ++GPA + QA + D+ +RL L + C NC + CPK L Sbjct: 146 NEHND-FIGPAAIAQARLFNTYPGDKHSKKRLRTLMGKKGIEGCGQAHNCVRVCPKKLPL 204 Query: 244 AKAIAKIKMMLLDRKI 259 ++I+ + + + Sbjct: 205 TESISAMGREISKHSL 220 >gi|332830068|gb|EGK02696.1| hypothetical protein HMPREF9455_00946 [Dysgonomonas gadei ATCC BAA-286] Length = 251 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 83/249 (33%), Gaps = 25/249 (10%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 +++R P KG +TY + + L+ L + + + CRE Sbjct: 7 ITLKVWRQRGPQEKGA--FETYPLKGISTESSFLEMLDILNENLINEGKEPVVFDHDCRE 64 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 GICG C + I+G C M+ K + P VI+DL+VD + F Sbjct: 65 GICGMCSLYINGHPHGPDEDITTCQLHMRKFKDGETITVEPWRSAGFPVIRDLMVDRTAF 124 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T A + D + C+ C C +C N L Sbjct: 125 DKIMQAGGYVSVNTGGIPDANAIPIPKTDADEAMDAASCIGCGACVAACK----NGSAML 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L R E + D C C CPK ++ A IA+ Sbjct: 181 FVSAKVSQLALLPQGRVEAARRAKAMVSKMDELGFGNCTNTQACEVQCPKNVSIAN-IAR 239 Query: 250 IKMMLLDRK 258 + L K Sbjct: 240 MNREFLKAK 248 >gi|110597316|ref|ZP_01385604.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] gi|110341152|gb|EAT59620.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] Length = 257 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 84/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + + M +Y V + + L + ++ ++ CREGI Sbjct: 4 TLKIWRQK-NAEAKGGMVSYEVSGISSDSSFFEMLDILNQQLIESGGDPVSFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C + I+G C M+ + ++ P VI+DL+VD S F Sbjct: 63 CGTCSLYINGRPHGPVKGVTTCQLHMRSFRDGETIHIEPWRAKAFPVIRDLIVDRSAFDK 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + + A + C+ C C +C + L Sbjct: 123 VIQAGGYVSVNSGGVPDANTIPVEKSKSDSAFDAAACIGCGACVAACSNAAA----MLFI 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L R E + + D C C CPKG++ IA++ Sbjct: 179 GAKVSHLALLPQGRVEAEKRVQKMVACMDQLGFGNCSNTYACEAECPKGISVVN-IARMN 237 Query: 252 MMLLDRKI 259 L K+ Sbjct: 238 RGFLKAKL 245 >gi|316968444|gb|EFV52722.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit (IP) [Trichinella spiralis] Length = 417 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 93/248 (37%), Positives = 122/248 (49%), Gaps = 37/248 (14%) Query: 27 LKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K+++IYR++P+ P + TY VDL NCGPM+LD L+ IKN+ D TLT RRSCREGIC Sbjct: 103 MKQFQIYRYDPEKPNSKPYLQTYNVDLLNCGPMILDALIKIKNEQDATLTFRRSCREGIC 162 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAI--------AVYPLPHMSVIKDL-------VVDMS 130 GSC MNI+G NTLAC+ I +YPLPHM VIKDL VVDMS Sbjct: 163 GSCAMNINGENTLACIWFHLLCFSKIDTNLNKPAKIYPLPHMYVIKDLVPVRLAFVVDMS 222 Query: 131 HFYSQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY Q+RSI+PWLK ++ L + + Y C + Y Sbjct: 223 LFYQQYRSIDPWLKRKEKYVYGEKQLFQTPEERSRLVRYNLRRCYFLFNT-RVYRMACMN 281 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ++ + ++ + C GL+PAKAIAK Sbjct: 282 AFFAHVVQLHAHLIG--------------GIKISIWVQQSC--CKLI---GLDPAKAIAK 322 Query: 250 IKMMLLDR 257 IKM+L R Sbjct: 323 IKMLLTAR 330 >gi|322435013|ref|YP_004217225.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidobacterium sp. MP5ACTX9] gi|321162740|gb|ADW68445.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Acidobacterium sp. MP5ACTX9] Length = 251 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 97/247 (39%), Gaps = 12/247 (4%) Query: 22 TGEKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPM------VLDGLLYIKNKIDPTL 74 E I R PD + + + + + + + + Sbjct: 2 ATATRTIEVHIKRQATPDAPA--RTEKFSIPYRPNMNITSLLGEIAAEPVTASGQQTTAI 59 Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 +C E ICGSC M I+G +AC + ++ I + PL V++DL VD S + Sbjct: 60 AYDANCLEEICGSCAMLINGKARMACSALVDKLEQPITLAPLSKFPVVRDLAVDRSVLFQ 119 Query: 135 QHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++++ W+ Q + ++ L C+ C C CP + +S ++G Sbjct: 120 NLKAVKAWVPIDGTYDLGPAPRQFPQIQESRYPLSNCISCTICMEVCPQFN-DSTNFVGA 178 Query: 194 AILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + Q + +D + ERL L + C NC +CPK L +AI+ + Sbjct: 179 ATIAQVKLFNMDPAGAVLKEERLRALAGDGGVQECGMAQNCVAACPKQLPLIEAISDVSR 238 Query: 253 MLLDRKI 259 ++ +++ Sbjct: 239 DVVIQQV 245 >gi|322420896|ref|YP_004200119.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter sp. M18] gi|320127283|gb|ADW14843.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter sp. M18] Length = 246 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 79/256 (30%), Gaps = 34/256 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P L++Y +PD +D L G + Sbjct: 7 VWRQSGPKAPGKLEQYEAKNVSPDQSFLEMLDEVNEQLIKAGK--------------EPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ +Y P ++KD Sbjct: 53 VFDHDCREGICGMCSQVINGVPHGGQERTTVCQLHMRSFNDGDTIYIEPWRALAFPILKD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD S+ ++ T LL +D EC+ C C +CP Sbjct: 113 LIVDRSNLEKIMQAGGYTSCHTGGVADGNALLVPQKDADYAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N L + + L + E + C C +CPKG+ Sbjct: 171 --NGSAMLYTSAKVAQLAALPQGKAEAAERVCAMTEAMQEAGFGNCSNHYECQAACPKGI 228 Query: 242 NPAKAIAKIKMMLLDR 257 N K IA++ Sbjct: 229 N-VKFIARLNREYQKA 243 >gi|317052290|ref|YP_004113406.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfurispirillum indicum S5] gi|316947374|gb|ADU66850.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfurispirillum indicum S5] Length = 246 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 87/255 (34%), Gaps = 34/255 (13%) Query: 17 IWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W L++Y+ +PD +D DL +K IDP + Sbjct: 7 VWRQKDANSPGKLEQYKADHVSPDMSFLEMLDVVNEDL-------------VKQGIDP-I 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ K ++Y P +I+D Sbjct: 53 AFDHDCREGICGMCSQVINGIPHGPEEKTTVCQLHMRSFKDGDSIYIEPWRAKAFPIIRD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD + + S T A + S D EC+ C C +CP Sbjct: 113 LIVDRTALDNIIESGGYVSASTGGVPDANAIPISKIDADNAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N L + + +L + E + C C +CPKG+ Sbjct: 171 --NGSAMLFTSAKVAHLAYLPQGKVEAAQRVRNMTAKMSELGFGNCTNHYECEAACPKGV 228 Query: 242 NPAKAIAKIKMMLLD 256 N + IAK+ L Sbjct: 229 N-VRFIAKLNREYLK 242 >gi|158521568|ref|YP_001529438.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfococcus oleovorans Hxd3] gi|158510394|gb|ABW67361.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 251 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 77/248 (31%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 +++R + +TY + L+ + + ++ + CREGI Sbjct: 7 TLKVWRQE-NGDSKGGFETYTARDISTDMSFLEMMDVVNEELALAGKEPIAFDHDCREGI 65 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG CG + G C M+ V P V+KDLVVD S F Sbjct: 66 CGMCGAVVGGFAHGHEKGTTLCQLHMRHFSDGDTVVIEPWRSRAFKVVKDLVVDRSAFDR 125 Query: 135 QH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T + S E +K C+ C C SCP N L Sbjct: 126 IIQEGGYISVNTGGAPDGNAIPISQEAAEKAMDAASCIGCGACVASCP----NGAAMLFV 181 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L R E L D C C CPK ++ IA++ Sbjct: 182 GAKISQLALLPQGRPEAGQRVRAMLKAHDSLGFGNCSNERECEARCPKNISIVN-IARMN 240 Query: 252 MMLLDRKI 259 + + Sbjct: 241 REFIKAGL 248 >gi|261416887|ref|YP_003250570.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373343|gb|ACX76088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327184|gb|ADL26385.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 253 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 83/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + +I +PD +D + G Sbjct: 4 KIWRQKDAKTKGQFETVKINDVSPDMSFLEMLDIVNEEQMKQGK--------------EG 49 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 CREGICG C + I+G C M+ K + P VI+ Sbjct: 50 FAFDHDCREGICGMCSLVINGMPHGPDHATTTCQLHMRKFKDGDTIVIEPWRAAAFPVIR 109 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D VD + F ++ + T + A + D + C+ C C +C Sbjct: 110 DCAVDRTAFDRIIQAGGFVSVNTGAAPEASTIPVPKADADRAFDAAACIGCGACVAACK- 168 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + +L + E + L + D C + C +CPKG Sbjct: 169 ---NASAMLFVSAKVSHLSFLPQGKVEAKKRVLAMVAQMDKEGFGNCTNLYECQAACPKG 225 Query: 241 LNPAKAIAKIKMMLLDRKI 259 + IAK+ L + Sbjct: 226 I-TVDYIAKMNREYLGATV 243 >gi|77918059|ref|YP_355874.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pelobacter carbinolicus DSM 2380] gi|77544142|gb|ABA87704.1| succinate dehydrogenase subunit B [Pelobacter carbinolicus DSM 2380] Length = 252 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 86/254 (33%), Gaps = 34/254 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + L Y+ +PD +D L + G + Sbjct: 7 VWRQKGPNDKGKLNTYKATDISPDMSFLEMLDVVNEGLIHQGI--------------EPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG+C I+G C M+ K +Y P VI+D Sbjct: 53 AFDHDCREGICGTCSQVINGDPHGPQAKTTVCQLHMRQFKDGDEIYIEPWRSRAFPVIRD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD ++ + T A +L +D + EC+ C C +CP Sbjct: 113 LVVDRGAMDRLVQAGGYVSVSTGGVPDANAILIPKDDAETAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N L A + L R E + + C +C +CPKG+ Sbjct: 171 --NGSAMLFVAAKVGQLAKLPQGRTEAASRVCTMTDAMLKEGFGNCSNHYDCEAACPKGI 228 Query: 242 NPAKAIAKIKMMLL 255 + K IA++ L Sbjct: 229 S-VKFIAQLNREYL 241 >gi|326334104|ref|ZP_08200331.1| fumarate reductase, iron-sulfur protein [Nocardioidaceae bacterium Broad-1] gi|325948080|gb|EGD40193.1| fumarate reductase, iron-sulfur protein [Nocardioidaceae bacterium Broad-1] Length = 246 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 83/242 (34%), Gaps = 22/242 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R + + TY +D + L+ L + ++ + + CREGI Sbjct: 4 TLKIWRQ-ANASEKGALKTYELDGVSQDMSFLEMLDLLNEQLLHNDEEPVAFDSDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 CG C + I+G C M+ + P ++KDL+VD S F Sbjct: 63 CGMCSLMINGQAHGPEVTTTCQLHMRSFNDGDTITIEPWRAASFPIVKDLIVDRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T S A + + + C+ C C +CP N L Sbjct: 123 IQNGGYISANTGSAPEANSVPAPRDKAMRAFNTATCIGCGACVAACP----NGSASLFLG 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + D C I C +CPK + P I+++ Sbjct: 179 AKITHLGELPQGQPERYSRVQSMVGQHDAEGFGGCTNIGECAAACPKEI-PLDVISQLNK 237 Query: 253 ML 254 L Sbjct: 238 DL 239 >gi|256389616|ref|YP_003111180.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Catenulispora acidiphila DSM 44928] gi|256355842|gb|ACU69339.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Catenulispora acidiphila DSM 44928] Length = 249 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 87/248 (35%), Gaps = 25/248 (10%) Query: 29 EYRIYRWNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R +N P M Y +D + L+ L + K+ + + CREG Sbjct: 4 TLRVWRQ--ENASRPGRMQPYEIDGVSRDMSFLEMLDVLNEKLILDGEDPVAFDHDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG+C + IDG C M+ + + P V+KDLVVD S Sbjct: 62 ICGACSLMIDGEAHGPEKKTTTCQLHMRSFRDGATIDVEPWRAAAFPVVKDLVVDRSALD 121 Query: 134 SQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S T + A EC+ C C +CP N L Sbjct: 122 RVIQSGGYITAPTGAAPEAHATPIPKPAADLAFENAECIGCGACVAACP----NGSASLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + L E + L L+ D C C +CPKG+ A +IA + Sbjct: 178 TAAKINHLNTLPQGAPERETRVLTMLQQTDAEGFGGCTLTGECATACPKGIPLA-SIAAM 236 Query: 251 KMMLLDRK 258 L + Sbjct: 237 NKEWLRAQ 244 >gi|291516043|emb|CBK65253.1| succinate dehydrogenase subunit B [Alistipes shahii WAL 8301] Length = 247 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 91/247 (36%), Gaps = 23/247 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K ++Y V+ + L+ L + N + + CREGI Sbjct: 4 TLKIWRQK-DAKSKGAFESYKVENISADTSFLEMLDILNNNLIHEGKEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C ++IDG C M+ K + P VIKDLVV+ S + Sbjct: 63 CGMCSLHIDGQAHGPSQGATTCQIYMRKFKDGATITIEPWRSAAFPVIKDLVVNRSAYDQ 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T S A + S D ++ C+ C C+ +C N L Sbjct: 123 ILQAGGFISVRTNSVPDANAIPISQADAEESMDAAACIGCGACAATCK----NGSAMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + + L R E + D C C CPK ++ A IA++ Sbjct: 179 AARVSSLAKLPQGRVEGARRAKAMVAKMDELGFGNCTNTGACQAECPKQISIA-HIARLN 237 Query: 252 MMLLDRK 258 L K Sbjct: 238 REFLSAK 244 >gi|227538666|ref|ZP_03968715.1| succinate dehydrogenase iron-sulfur subunit [Sphingobacterium spiritivorum ATCC 33300] gi|300770201|ref|ZP_07080080.1| fumarate reductase subunit B [Sphingobacterium spiritivorum ATCC 33861] gi|227241585|gb|EEI91600.1| succinate dehydrogenase iron-sulfur subunit [Sphingobacterium spiritivorum ATCC 33300] gi|300762677|gb|EFK59494.1| fumarate reductase subunit B [Sphingobacterium spiritivorum ATCC 33861] Length = 257 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 79/248 (31%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R D TY + L+ L + ++ + + CREGI Sbjct: 8 TLKVWRQKNDK-QKGQFVTYQANNIADDMSFLEMLDIVNEELTRKGEDPIYFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P V+KDL VD + F Sbjct: 67 CGMCSLVINGRPHGPKQGTTTCQLHMRSFHDGQTIVIEPWRAAAFPVLKDLAVDRTAFDR 126 Query: 135 -QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + T A +L + C+ C C +C N+ L Sbjct: 127 IQQAGGYVNVNTGGVPDANAILIPKRIADEAFESATCIGCGACVAACK----NASAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + + L + E + D C C CP G+ IA++ Sbjct: 183 SAKVSQFALLPQGQTERYERAQAMVDQMDAEGFGNCTNTGACEAECPVGIKLTN-IARLN 241 Query: 252 MMLLDRKI 259 L K+ Sbjct: 242 REYLTAKL 249 >gi|317124334|ref|YP_004098446.1| succinate dehydrogenase subunit B [Intrasporangium calvum DSM 43043] gi|315588422|gb|ADU47719.1| succinate dehydrogenase subunit B [Intrasporangium calvum DSM 43043] Length = 250 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 81/256 (31%), Gaps = 33/256 (12%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW P + + Y + +PD +D L G + Sbjct: 9 KIWRQAGPRAKGEVVTYPVTDISPDMSFLEMLDVLNEQLTARG--------------EEP 54 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG-------AIAVYPLPH--MSVIKD 124 + CREGICG CG+ I G V + I V P VIKD Sbjct: 55 IAFDSDCREGICGMCGLMISGKAHGPEVTTTCQLHMRSFHDGDEITVEPWRADAFPVIKD 114 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD F ++ T + A + + C+ C C +CP Sbjct: 115 LVVDREAFDRIIQAGGFISANTGAAPEAHSVPVPKPKADRSFMAAACIGCGACVAACP-- 172 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGL 241 N+ L + L + E + + D C I C+ +CPK + Sbjct: 173 --NASGMLFLGAKITHLGELPQGQPERDARVVAMVNQHDHEGFGGCTNIGECSLACPKEI 230 Query: 242 NPAKAIAKIKMMLLDR 257 P I ++ L Sbjct: 231 -PQDVINQLNQDLRRA 245 >gi|319997172|gb|ADV91180.1| mitochondrial succinate dehydrogenase iron-sulphur subunit-like protein 3 [Karlodinium micrum] Length = 155 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 77/127 (60%), Positives = 97/127 (76%), Gaps = 2/127 (1%) Query: 131 HFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 +FY+Q++SIEPWLK K KE QSHEDR K+DG+YEC++CA C TSCPSYWWN + Sbjct: 1 NFYNQYKSIEPWLKRKDEKQAGEKEYYQSHEDRLKLDGMYECILCASCMTSCPSYWWNPE 60 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 YLGPA+L+QAYRW+ DSRD++ ERL + D +LYRCH IMNCT CPKGL+PAKAI Sbjct: 61 YYLGPAVLMQAYRWIADSRDQYTEERLAWVNDTMKLYRCHGIMNCTNCCPKGLDPAKAIV 120 Query: 249 KIKMMLL 255 ++K + Sbjct: 121 ELKAQVA 127 >gi|237804942|ref|YP_002889096.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|231273242|emb|CAX10155.1| succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 251 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C E +CGSC ++++G AC + + K I + PL Sbjct: 20 PVNIHGERVDPVVWEQACLEEVCGSCAVSVNGIPRQACTALIHEHIDAKREIKLAPLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C NC + CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNCVRVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|150399143|ref|YP_001322910.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus vannielii SB] gi|150011846|gb|ABR54298.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus vannielii SB] Length = 494 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 21/237 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + +I + K + V V D L YI + R SCR G CG Sbjct: 1 MNTVKI-----NVKKTEGFKEFIVPEK---ITVTDALEYINKNYGENIQFRVSCRAGQCG 52 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC M I+ + LAC ++ + + PL VI DLVVD S +Y + +++ +++ Sbjct: 53 SCAMTINKKSRLACKTKVE---DKMYIEPLDGFDVIIDLVVDRSPYYKKLGTLKNYIQQK 109 Query: 147 SPKPAKELLQSHE----DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + KP E L + + D + + + C+ C C + CP+ +++ Y GP + Q R+ Sbjct: 110 NGKPNLEELSNLKIYPNDIKDVKSIRGCIECLSCISMCPARKYSN--YPGPTFMRQLARF 167 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIKMMLLDRK 258 D RD+ + E +Y C T C + CPK ++ + K++ + Sbjct: 168 AFDKRDDSKRESDAF---NENIYNCTTCGRCVEVCPKEIDIVHNVVEKLREKTFKKG 221 >gi|296271683|ref|YP_003654314.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] gi|296095858|gb|ADG91808.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Arcobacter nitrofigilis DSM 7299] Length = 246 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 12/213 (5%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL 98 ++ Y ++ +N L+ L YIK ID TLT R C+ GICGSC + I+ L Sbjct: 9 KDKEKYIEEYKINKEN--ITALEALEYIKENIDSTLTYRSGCKSGICGSCSILINDKEVL 66 Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 AC + I V PL + ++IKDLVVD+ + +++ Sbjct: 67 ACKCKL---YENITVKPLKNSTIIKDLVVDLEQTGKLLTKSKAFIEEFQESA-----IKK 118 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ED + ID C++C C +SCP Y N D +LGP L + R++ D ++ + ++LD + Sbjct: 119 EDEKLIDLQSNCILCQNCYSSCPVYGVNKD-FLGPFALTRVLRYVNDKKEANKAQKLDAI 177 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ++ C NCT SCP+ ++ I ++ Sbjct: 178 Q-VNGIWDCTLCGNCTISCPQFIDSKTDIMNLR 209 >gi|333029586|ref|ZP_08457647.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides coprosuis DSM 18011] gi|332740183|gb|EGJ70665.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides coprosuis DSM 18011] Length = 251 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +T+ + + +L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKTKGAFETFQMKDIHQSVSLLEMLDILNEQLINDGKEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VI+DL+VD S + Sbjct: 67 CGMCSLYINGHPHGPGTRATTCQVYMRRFNDGDTITIEPWRSAGFPVIRDLMVDRSSYDK 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + +D +K C+ C C +C N L Sbjct: 127 IIQAGGYVSVNTGAPQDANAILIPKDIAEKSMDAASCIGCGSCVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + D C C CPKG++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKAEAARRVKAMVAKMDELGFGNCTNTRACEAECPKGISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIKAKL 249 >gi|289549170|ref|YP_003474158.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermocrinis albus DSM 14484] gi|289182787|gb|ADC90031.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Thermocrinis albus DSM 14484] Length = 234 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 9/210 (4%) Query: 40 KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLA 99 + + V + +LD L YIK DPT++ R CR G+CG+CG+ +G LA Sbjct: 10 GDREIIKVFSVP-SSSHMTLLDALWYIKENADPTISFRSMCRAGVCGTCGVKANGKPVLA 68 Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 C D+ G + V PL + VI+DLVVD + R W+ S Sbjct: 69 CSVDISSFGGRVRVEPLDGLRVIRDLVVDHEALVERLRRNRVWMVPTSE----NKPLPPS 124 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++++ YEC+MC C + CP ++ + GP +AY L+D R + R L Sbjct: 125 LFRRLERGYECIMCGLCDSVCPVL-IQNNSFGGPMAFAKAYPILLDPR--NKDPRWQALA 181 Query: 220 DPFRL-YRCHTIMNCTQSCPKGLNPAKAIA 248 L C NC+ +CPK + P I+ Sbjct: 182 LKENLINACTHCKNCSLACPKSVMPEALIS 211 >gi|168703601|ref|ZP_02735878.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gemmata obscuriglobus UQM 2246] Length = 250 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 89/258 (34%), Gaps = 34/258 (13%) Query: 17 IWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W T + +Y + +PD +DT L G + + Sbjct: 7 VWRQKSRTANGQMVKYPLDGISPDMSFLEMLDTLNEQLIRKG--------------EEPV 52 Query: 75 TLRRSCREGICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICGSC M I+G T C M+ +Y P V+KD Sbjct: 53 AFDHDCREGICGSCAMMINGLAHGPERATTTCQLHMRSFADGAEIYLEPWRAGPFPVVKD 112 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LV D S F +S + T L + D+ + EC+ C C +CP Sbjct: 113 LVCDRSAFDRIIQSGGFVSVNTGGAPDGNCLPIAKVDQDRAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N+ L + + L + E + + D C I C +CPK + Sbjct: 171 --NASAMLFLSAKVSHLAQLPQGQPERKERVRGMVAQHDREGFGHCTNINECEAACPKEI 228 Query: 242 NPAKAIAKIKMMLLDRKI 259 + IA++ + + Sbjct: 229 SVT-HIAQLNRDFITSTV 245 >gi|15605320|ref|NP_220106.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis D/UW-3/CX] gi|3329035|gb|AAC68193.1| Succinate Dehydrogenase [Chlamydia trachomatis D/UW-3/CX] gi|297748721|gb|ADI51267.1| Succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis D-EC] gi|297749601|gb|ADI52279.1| Succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis D-LC] Length = 232 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C E +CGSC ++++G AC + + K I + PL Sbjct: 20 PVNIHGERVDPVVWEQACLEEVCGSCAVSVNGIPRQACTALIHEHIDAKREIKLAPLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C NC Q CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNCVQVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|183221085|ref|YP_001839081.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911177|ref|YP_001962732.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775853|gb|ABZ94154.1| Succinate dehydrogenase/fumarate reductase subunit B [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779507|gb|ABZ97805.1| Succinate dehydrogenase iron-sulfur subunit SdhB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 246 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 79/243 (32%), Gaps = 23/243 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +++R D M +Y + + L+ L + + + D + CREGIC Sbjct: 8 LKVWRQK-DKNDKGRMVSYEANNVSEHMSFLEMLDVVNDDLIKKGDDPIAFDHDCREGIC 66 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 GSC M I+G C M+ K V P V KDLVVD S F Sbjct: 67 GSCSMVINGVPHGPEKGTTTCQLHMRKFKDGDTVVIEPWRAKAFPVTKDLVVDRSAFDRI 126 Query: 136 HRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ T L D C+ C C +C N+ L + Sbjct: 127 IQAGGYVNVNTGGAPDGNALPIPKVDADLAMDAATCIGCGACVAACK----NASAMLFVS 182 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L E + + D C C +CPK ++ I K+ Sbjct: 183 AKVSHLALLPQGVVEKKERVRKMVSAMDKEGFGNCTNQYECEAACPKEIS-VNFITKLNR 241 Query: 253 MLL 255 + Sbjct: 242 EFI 244 >gi|95930594|ref|ZP_01313329.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] gi|95133429|gb|EAT15093.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] Length = 246 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 90/257 (35%), Gaps = 36/257 (14%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + L++Y +PD+ +D +L G + Sbjct: 7 VWRQNGPEDKGKLEQYEAKNVSPDSSFLEMLDEVNEELITSGI--------------EPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGA--IAVYPLPH--MSVIKD 124 CREGICG+CG ++G AC M+ + + P VIKD Sbjct: 53 EFDNDCREGICGTCGCVVNGIPHGPQEKTTACQLHMRQFSDGDSLTLEPWRAKAFPVIKD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L VD + + +S T A + L S D EC+ C C +CP Sbjct: 113 LAVDRAALDNIIQSGGYTSAYTGEVGEANQTLISKPDADYAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKG 240 N L + + L E ER++N+ + C C +CPKG Sbjct: 171 --NGSAMLFTSAKIAQMAVLPQGEIEA-AERVNNMTEAMLNAGFGNCTNHYECEAACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 ++ K IAK + Sbjct: 228 VS-VKFIAKTNREYVKA 243 >gi|76789328|ref|YP_328414.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis A/HAR-13] gi|237803020|ref|YP_002888214.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis B/Jali20/OT] gi|255311411|ref|ZP_05353981.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis 6276] gi|255317712|ref|ZP_05358958.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis 6276s] gi|76167858|gb|AAX50866.1| succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis A/HAR-13] gi|231274254|emb|CAX11048.1| succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis B/Jali20/OT] gi|296436125|gb|ADH18299.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis G/9768] gi|296437054|gb|ADH19224.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis G/11222] gi|297140487|gb|ADH97245.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis G/9301] Length = 232 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C E +CGSC ++++G AC + + K I + PL Sbjct: 20 PVNIHGERVDPVVWEQACLEEVCGSCAVSVNGIPRQACTALIHEHIDAKREIKLAPLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C NC + CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNCVRVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|298372401|ref|ZP_06982391.1| fumarate reductase, iron-sulfur protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275305|gb|EFI16856.1| fumarate reductase, iron-sulfur protein [Bacteroidetes oral taxon 274 str. F0058] Length = 251 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREG 83 + +++R K +TY ++ + L+ + + + + CREG Sbjct: 7 IKVKVWRQ-AGPKVKGMFETYELNNISTDASFLEMIDILNEKLVQEHKEPIAFDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG C + I+G C M+ + P VIKDL+VD + + Sbjct: 66 ICGMCSLYINGHPHGPDQAITTCQLHMRKFHDGETITIEPWRSRAFPVIKDLIVDRNAYD 125 Query: 134 SQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ T A + + C+ C C+ +C N L Sbjct: 126 KIMQAGGYVNVNTGGIPDANAIPIPKPVADEAMDAASCIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + L + E + D C C CPK ++ IA++ Sbjct: 182 VAAKVSQLALLPQGKIEKAARAKAMVAKMDELGFGNCTNTGACEAECPKSVSIT-HIARL 240 Query: 251 KMMLLDRK 258 + K Sbjct: 241 NREYIGAK 248 >gi|166154806|ref|YP_001654924.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis 434/Bu] gi|166155681|ref|YP_001653936.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336082|ref|ZP_07224326.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis L2tet1] gi|165930794|emb|CAP04291.1| succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis 434/Bu] gi|165931669|emb|CAP07245.1| succinate dehydrogenase iron-sulfur protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 232 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C E +CGSC + ++G AC + + K I + PL Sbjct: 20 PVNIHGERVDPVVWEQACLEEVCGSCAVLVNGIPRQACTALIHEHMDAKREIKLAPLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C NC + CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNCVRVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|253699550|ref|YP_003020739.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter sp. M21] gi|251774400|gb|ACT16981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 246 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 81/257 (31%), Gaps = 36/257 (14%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P L++Y +PD +D L G + Sbjct: 7 VWRQSGPKEPGKLEQYEAKNVSPDQSFLEMLDEVNEQLIKTGK--------------EPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ +Y P ++KD Sbjct: 53 VFDHDCREGICGMCSQVINGVPHGGQERTTVCQLHMRRFNDGDTIYIEPWRALAFPILKD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD ++ T LL D EC+ C C +CP Sbjct: 113 LIVDRDALEKIMQAGGYTSCHTGGVADGNALLVPKPDADYAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKG 240 N L + + L + E ER+ N+ D C C +CPKG Sbjct: 171 --NGSAMLYTSAKVAQLAALPQGKAEA-AERVCNMTDAMQAAGFGNCSNHYECQAACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 +N K IAK+ Sbjct: 228 IN-VKFIAKLNREYQKA 243 >gi|225159163|ref|ZP_03725468.1| ferredoxin [Opitutaceae bacterium TAV2] gi|224802265|gb|EEG20532.1| ferredoxin [Opitutaceae bacterium TAV2] Length = 269 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 88/257 (34%), Gaps = 34/257 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W P EY+ +P+ +D +L+ G + Sbjct: 15 RVWRQAGPDKPGKFVEYKATNCDPNMSFLEMLDVVNDNLERKG--------------EDP 60 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLA------CVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C + IDG C M+ + P V+K Sbjct: 61 IAFAHDCREGICGTCSLVIDGKPHGPHKGIASCQTYMRSFGDGAVITVEPFRAHPFPVVK 120 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+ D S F Q ++T +P A + +D + C+ C C +C Sbjct: 121 DLITDRSAFDKIQQAGGFISIRTGAPCDANAIPVPKDDAELAMDAAACIGCGACVAACK- 179 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L A + + L + E L + D C C+ +CPK Sbjct: 180 ---NASAMLFVAAKVSQFSLLPQGQPERDSRVLAMVAKMDELGFGNCTNQYECSAACPKA 236 Query: 241 LNPAKAIAKIKMMLLDR 257 ++ IA++ + Sbjct: 237 ISH-DFIARMNRDYIKA 252 >gi|288928603|ref|ZP_06422449.1| fumarate reductase, iron-sulfur protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329587|gb|EFC68172.1| fumarate reductase, iron-sulfur protein [Prevotella sp. oral taxon 317 str. F0108] Length = 251 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 81/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 +++R N K DT+ + L+ L + ++ CREGI Sbjct: 8 TLKVWRQN-GPKAKGHFDTFEMKDIPGDTSFLEMLDILNEQLIEARQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VIKD +VD F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFKDGDVITVEPWRSAGFPVIKDCMVDRGAFDK 126 Query: 135 QHRSIEPWLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ P+ A +L ED + C+ C C +C N L Sbjct: 127 IIQAGGYTTIRTGQPQDANAILIPKEDADEAMDCATCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + + C C CPK + A IA++ Sbjct: 183 SSKVSQLALLPQGKPEAAKRAKAMVMTMEELGFGNCTNTRACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFISAKL 249 >gi|320533693|ref|ZP_08034312.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320134088|gb|EFW26417.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 256 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 28/249 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + +I+R + + Y + L+ L + ++ + CREG Sbjct: 3 IKLKIWRQK-NKDSKGHFEEYAMSGIEEHMSFLEVLDLLNEQLFAEGKEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------------AIAVYPLP--HMSVIKDLVVD 128 ICG CG+ I+G + I + P V++DL+VD Sbjct: 62 ICGQCGVVINGQAHGPIRSTTCQLHMRHLAEDPSFKDGSTITIEPWRSTGFPVLRDLIVD 121 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ + T A + E C+ C C +CP N+ Sbjct: 122 RSALDRIVQAGGYISVNTGGAPEAHSVPVQKEKADAAFEAAACIGCGACVAACP----NA 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + L + E + L D C I C CPK + P + Sbjct: 178 SAMLFTGAKISHLGLLPQGQPERLARVVSMLNQHDAEGFGGCTNIGECAAVCPKSV-PLE 236 Query: 246 AIAKIKMML 254 I+++ L Sbjct: 237 VISRLNRDL 245 >gi|325068091|ref|ZP_08126764.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces oris K20] gi|326774022|ref|ZP_08233304.1| fumarate reductase, iron-sulfur protein [Actinomyces viscosus C505] gi|326636161|gb|EGE37065.1| fumarate reductase, iron-sulfur protein [Actinomyces viscosus C505] Length = 256 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 28/249 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + +I+R + + Y + L+ L + ++ + CREG Sbjct: 3 IKLKIWRQK-NQDSKGHFEEYAMSGIEEHMSFLEVLDLLNEQLFAEGKEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------------AIAVYPLP--HMSVIKDLVVD 128 ICG CG+ I+G + I + P V++DL+VD Sbjct: 62 ICGQCGVVINGQAHGPIRSTTCQLHMRHLAEDPSFKDGSTITIEPWRSTGFPVLRDLIVD 121 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ + T A + E C+ C C +CP N+ Sbjct: 122 RSALDRIVQAGGYISVNTGGAPEAHSVPVQKEKADAAFEAAACIGCGACVAACP----NA 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + L + E + L D C I C CPK + P + Sbjct: 178 SAMLFTGAKISHLGLLPQGQPERLARVVSMLNQHDAEGFGGCTNIGECAAVCPKSV-PLE 236 Query: 246 AIAKIKMML 254 I+++ L Sbjct: 237 VISRLNRDL 245 >gi|284039855|ref|YP_003389785.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirosoma linguale DSM 74] gi|283819148|gb|ADB40986.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirosoma linguale DSM 74] Length = 252 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 88/259 (33%), Gaps = 34/259 (13%) Query: 16 KIWNAPTG--EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W L +Y++ + D D L G + Sbjct: 6 KVWRQKNNNTAGKLVDYQLDNVSEDMSFLEMFDVLNDSLTRKG--------------EDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 +T CREGICG C M I+G C M+ + P VIK Sbjct: 52 VTFDHDCREGICGMCSMYINGRAHGPQTGATTCQLHMRSFNDGDTIVVEPWRARAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S F +S + T S + A E+L + C+ C C +C Sbjct: 112 DLMVDRSAFDRIIQSGGYVSVNTGSARDANEILIPRTVADEAMDAAACIGCGACVAACK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + ER+ D C C+ CPK Sbjct: 171 ---NASAMLFVSAKVSQLAILPQGQSEQKERAERMVAQMDAEGFGACSFTGACSVECPKS 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA++ L K+ Sbjct: 228 ISL-DHIARMNREYLGAKL 245 >gi|226227073|ref|YP_002761179.1| succinate dehydrogenase iron-sulfur subunit [Gemmatimonas aurantiaca T-27] gi|226090264|dbj|BAH38709.1| succinate dehydrogenase iron-sulfur subunit [Gemmatimonas aurantiaca T-27] Length = 257 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 84/244 (34%), Gaps = 23/244 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 ++R P ++ ++TY +D + L+ + ++ + CREGI Sbjct: 4 TLNVWRQ-PASQAAGKLETYTLDGVSADMSFLEMFDMLNEQLTEAGKEPVAFAHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CGSC M I+G C M+ K + P ++KDLVV+ F Sbjct: 63 CGSCAMMINGQAHGPWKGAATCQLHMRAFKDGDIITVEPWRASPFPLVKDLVVNRGSFDR 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + +D ++ C+ C C +CP+ + L Sbjct: 123 IIQAGGFVSVNTGGARDANEILIGKDILEESMDAAACIGCGACVAACPNASAS----LFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E L + D C C ++CPK +N I ++ Sbjct: 179 GAKISHLGLLPQGQPERDKRALAMVEQMDLEGFGHCTLTGECQEACPKEINI-DVIKRMN 237 Query: 252 MMLL 255 L Sbjct: 238 RDYL 241 >gi|163781863|ref|ZP_02176863.1| fumarate reductase iron-sulfur subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159883083|gb|EDP76587.1| fumarate reductase iron-sulfur subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 233 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 9/212 (4%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKD 106 Y V+ P VL+ L IK ++DP+L+ R CR +CG+C + ++G + LAC + Sbjct: 17 EYEVE-TGENPTVLEILTKIKEELDPSLSFRAMCRASVCGTCAVKVNGEHRLACNT--RV 73 Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P+ IKDLVV Y R W + ++ K Sbjct: 74 NGEEVLIEPVDGYIPIKDLVVSHEEIYDGLRRARVWFVPREENLT----ITPQELNKTSR 129 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 ++C++C C+ CP D + GP++ + YR L D RD ERL+ L Sbjct: 130 AWDCILCGICNNVCPPLLEKRD-FGGPSLFTKIYRILEDPRDSLGEERLNGL-TALNAQN 187 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC CPKG P + I I+ L + Sbjct: 188 CVHCSNCNLFCPKGCMPERWITVIEGKLTQKG 219 >gi|197119696|ref|YP_002140123.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter bemidjiensis Bem] gi|197089056|gb|ACH40327.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Geobacter bemidjiensis Bem] Length = 246 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 82/257 (31%), Gaps = 36/257 (14%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P L++Y +PD +D IK DP + Sbjct: 7 VWRQSGPKEPGKLEQYEAKNVSPDQSFLEMLDEVNE-------------HLIKEGKDP-I 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ +Y P ++KD Sbjct: 53 VFDHDCREGICGMCSQVINGVPHGGQERTTVCQLHMRRFSDGDTIYIEPWRALAFPILKD 112 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD ++ T LL D EC+ C C +CP Sbjct: 113 LIVDRDALEKIMQAGGYTSCHTGGVADGNALLVPKPDADYAMDAAECIGCGACVAACP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKG 240 N L + + L + E ER+ + D C C +CPKG Sbjct: 171 --NGSAMLYTSAKVAQLAALPQGKAEA-AERVCAMTDAMQAAGFGNCSNHYECQAACPKG 227 Query: 241 LNPAKAIAKIKMMLLDR 257 +N K IA++ Sbjct: 228 IN-VKFIARLNREYQKA 243 >gi|269216585|ref|ZP_06160439.1| fumarate reductase, subunit B [Slackia exigua ATCC 700122] gi|269130114|gb|EEZ61196.1| fumarate reductase, subunit B [Slackia exigua ATCC 700122] Length = 238 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 10/235 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + R++P P +Y V VL+ L+YI DP + SCR +CG C Sbjct: 2 KVTVLRFDPSKDPEPYEASYDVPWHEY-ITVLEVLMYIYENYDP-IAFDYSCRGRVCGRC 59 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 G+ +DG LAC + +I++ PL V++D +VD S F ++ +I + Sbjct: 60 GVMLDGEPCLACYTVIDS-DRSISLAPLNGFPVVRDFIVDRSKFQNRISAIYDRQRYQPL 118 Query: 149 KPAKELLQSHEDRQKIDG-LYECVMCACCSTSCPSYWWN--SDRYLGPAILLQAYRWLID 205 + + + C C C +SCP S+ Y+GPA L+ D Sbjct: 119 SLDEIDTEYDPAVVDKAKGIEWCARCMLCVSSCPVVNSPSGSNGYVGPAGLVALGLRFYD 178 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP-KGLNPAKAIAKIKMMLLDRKI 259 D+ ++ +++ L+ C C + CP ++ A ++ ++ + Sbjct: 179 PNDQG-NRVVEAVQN--GLFDCIQCGKCDEVCPAAEIDHLGIYADLRAAAEEQDV 230 >gi|329945789|ref|ZP_08293476.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328528237|gb|EGF55215.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 256 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 28/249 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + +I+R + + Y + L+ L + ++ + CREG Sbjct: 3 IKLKIWRQK-NKDSKGHFEEYAMSGIEEHMSFLEVLDLLNEQLFAEGKEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------------AIAVYPLP--HMSVIKDLVVD 128 ICG CG+ I+G + I + P V++DL+VD Sbjct: 62 ICGQCGVVINGQAHGPIRSTTCQLHMRHLAEDPSFKDGSTITIEPWRSTGFPVLRDLIVD 121 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ + T A + E C+ C C +CP N+ Sbjct: 122 RSALDRIVQAGGYISVNTGGAPEAHSVPVQKERADAAFEAAACIGCGACVAACP----NA 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + L + E + L D C I C CPK + P + Sbjct: 178 SAMLFTGAKISHLGLLPQGQPERLARVVSMLNQHDAEGFGGCTNIGECAAVCPKSV-PLE 236 Query: 246 AIAKIKMML 254 I+++ L Sbjct: 237 VISRLNRDL 245 >gi|297621990|ref|YP_003710127.1| succinate dehydrogenase iron-sulfur protein subunit B [Waddlia chondrophila WSU 86-1044] gi|297377291|gb|ADI39121.1| succinate dehydrogenase iron-sulfur protein subunit B [Waddlia chondrophila WSU 86-1044] Length = 255 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 17/238 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN------KIDPTLTLRRSCREG 83 +IYR P G + + + L ++ + KN K + C E Sbjct: 7 LKIYRGTP---GKQYWEEFELGLRPMSNIISGLMEIEKNPINRKGKKVEPVVWESGCLEE 63 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGA-----IAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +CGSC M ++G +C + I I V P +I+DL+VD + + + Sbjct: 64 VCGSCSMLVNGYPRQSCTAVINKIIKETGSRVITVAPFTKFPLIRDLMVDRTSMFDNLKK 123 Query: 139 IEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + W+ + S E ++ + L C+ C CC CP +D ++GP I Sbjct: 124 VHAWIDVDGIYDKGPGPKISPEKQEIMYTLSTCMTCGCCVEGCPQASLKND-FVGPQIFG 182 Query: 198 QAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q + + +G+RL + + + C NC + CPK + AIA I + Sbjct: 183 QVRLFNAHPTGKMQKGKRLRPMMEKGGISDCGNAQNCVRVCPKKIPLTDAIAAIGRDV 240 >gi|116626441|ref|YP_828597.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Candidatus Solibacter usitatus Ellin6076] gi|116229603|gb|ABJ88312.1| succinate dehydrogenase subunit B [Candidatus Solibacter usitatus Ellin6076] Length = 253 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 85/247 (34%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R + M Y V N L+ L + + + + CREGIC Sbjct: 5 LHIWRQR-NASDKGKMVRYEVPDVNHEMSFLEMLDVLNEDLIARNEDPVAFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G+CG ++G C M+ K +Y P V+KDLVV+ F Sbjct: 64 GTCGAMVNGVAHGPLPGTTLCQLHMRHFKDGDELYLEPWRAKAFPVVKDLVVNRGAFDRI 123 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + T S + +L E+ ++ C+ C C CP N+ L Sbjct: 124 IAAGGYISVSTGSAQDGNAILVPKENAERSMDAAACIGCGACVAMCP----NASAALFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + + + C I C CPK + + IA++ Sbjct: 180 AKIAHLGLLPQGQPEREQRAIAMVAQAKQELFGSCTNIGECEAVCPKEIKL-EVIARMNR 238 Query: 253 MLLDRKI 259 + I Sbjct: 239 DFIKASI 245 >gi|227876086|ref|ZP_03994205.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris ATCC 35243] gi|269977014|ref|ZP_06183988.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris 28-1] gi|306819362|ref|ZP_07453070.1| fumarate reductase subunit B [Mobiluncus mulieris ATCC 35239] gi|307701675|ref|ZP_07638691.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris FB024-16] gi|227843385|gb|EEJ53575.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris ATCC 35243] gi|269934845|gb|EEZ91405.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris 28-1] gi|304647849|gb|EFM45166.1| fumarate reductase subunit B [Mobiluncus mulieris ATCC 35239] gi|307613178|gb|EFN92431.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus mulieris FB024-16] Length = 249 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 88/245 (35%), Gaps = 24/245 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R N K + Y++ + L+ L + ++ + + CREG Sbjct: 3 ITLRVWRQN-GPKAKGALHEYHLTEISEDASFLEMLDILNEQLFAAGEEPIAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF 132 ICG CG+ I+G C M+ K + P +++DLVV+ + Sbjct: 62 ICGMCGVVINGVPHGPHKDRTTTCQLHMRTFKDGDTITIEPWRSKAFPILRDLVVNREAY 121 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T + A + ++ C+ C C+ +CP N L Sbjct: 122 DRIVQAGGYISVNTGAAPEAHSVPVPKDNADMAFEAAACIGCGACAAACP----NGSAML 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L + E ++ L D C I C + CPK + P I+ Sbjct: 178 FTSAKVMHLGLLPQGKPENYDRVVNMLNQHDAEGFGACQNIGECAKVCPKQI-PLDCISY 236 Query: 250 IKMML 254 + L Sbjct: 237 LNRQL 241 >gi|309811211|ref|ZP_07705003.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Dermacoccus sp. Ellin185] gi|308434823|gb|EFP58663.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Dermacoccus sp. Ellin185] Length = 246 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 86/239 (35%), Gaps = 22/239 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 +I+R + + +TY V + L+ L + ++ + CREGI Sbjct: 4 TLKIWRQD-NAAAAGRFETYPVSDISDDMSFLEMLDVLNEQLQADGIEPIAFDSDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKG-------AIAVYPLPH--MSVIKDLVVDMSHFYSQ 135 CG CG+ I G V + I V P V++DLVVD S F Sbjct: 63 CGMCGLMISGMAHGPEVTTTCQLHMRSFKDGDEITVEPWRADAFPVVRDLVVDRSAFDRI 122 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +S + T + A L + + +C+ C C +CP N+ L Sbjct: 123 IQSGGYISVNTGAAPEAHSQLVPKDHADRAFETAKCIGCGACVAACP----NASGMLFLG 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E + + D C I C ++CPK + P I+++ Sbjct: 179 AKITHLGELPQGQPERDARVVSMVNTHDHEGFGGCTNIGECAEACPKEI-PLDVISQLN 236 >gi|324526075|gb|ADY48628.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 144 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 77/130 (59%), Positives = 103/130 (79%), Gaps = 2/130 (1%) Query: 129 MSHFYSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 M+ FY+Q+ I+PWL+ K+ QS ++++KIDGLYEC++CACCSTSCPSYWWN Sbjct: 1 MNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCSTSCPSYWWN 60 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +D+YLGPA+L+QAYRW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK LNPAKA Sbjct: 61 ADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTCPKHLNPAKA 120 Query: 247 IAKIKMMLLD 256 I +IKM+L Sbjct: 121 IGEIKMLLTK 130 >gi|116328392|ref|YP_798112.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331118|ref|YP_800836.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121136|gb|ABJ79179.1| Succinate dehydrogenase/fumarate reductase subunit B [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124807|gb|ABJ76078.1| Succinate dehydrogenase/fumarate reductase subunit B [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 243 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 82/255 (32%), Gaps = 34/255 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W GE + +Y +P+ +D +L G + Sbjct: 6 KVWRQKNGETKGKIADYDAKDISPNMSFLEMLDVVNEELITKG--------------EDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICGSC + I+G +C M+ K +Y P VIK Sbjct: 52 IAFEHDCREGICGSCNLMINGQAHGPHQGVTSCQLHMRSFKDGDTIYIEPWRAKAFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + T A S D C+ C C SC Sbjct: 112 DLVVDRSAFDRIIQAGGFISVNTGGAPDANANPISKVDADVAMDAATCIGCGACVASCK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + + D C C CPK Sbjct: 171 ---NASAMLFVSAKITHLGLLPQGKVEQKERVKKMINAMDAEGFGNCTNQYECEAVCPKS 227 Query: 241 LNPAKAIAKIKMMLL 255 + I + + Sbjct: 228 IK-KDFIRTMNRDYI 241 >gi|75761760|ref|ZP_00741698.1| Succinate dehydrogenase iron-sulfur protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490745|gb|EAO54023.1| Succinate dehydrogenase iron-sulfur protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 193 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 3/177 (1%) Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C M I+G +C + ++ I + P+ V++DL VD S ++ + Sbjct: 2 NCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNALKR 61 Query: 139 IEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ + E RQ L +C+ C C SCP+ SD ++GPA L Sbjct: 62 VKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVNSKSD-FIGPAPLS 120 Query: 198 QAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 QA + E + +RL + L C NC QSCPKG+ +IA + Sbjct: 121 QARLFNSHPTGEMHKADRLRAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRD 177 >gi|225010391|ref|ZP_03700863.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Flavobacteria bacterium MS024-3C] gi|225005870|gb|EEG43820.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Flavobacteria bacterium MS024-3C] Length = 248 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 87/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGI 84 +I+R + M TY +D L+ L + K + + CREGI Sbjct: 4 TLKIWRQD-SANSKGKMQTYPIDGIEGDMSFLEMLDVLNEGLINKGETPVEFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CGSC + I+G C M+ K + P VIKDL+VD S F Sbjct: 63 CGSCSLQINGEPHGPDRMVTTCQLHMRSFKDGDTIAIEPFRAKAFPVIKDLIVDRSAFDR 122 Query: 135 --QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q + + A + + +D C+ C C +C N+ L Sbjct: 123 IQQSGGYVSVNTSGNTLDANAIPINKQDADSAFAAAACIGCGACVAACK----NASAMLF 178 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + Y L + E + + D C C CPKG++ + IA++ Sbjct: 179 TSAKVSQYALLPQGQVEATERVENMVRQMDLEGFGNCTNTGACEIECPKGISL-ENIARL 237 Query: 251 KMMLLDRKI 259 L I Sbjct: 238 NREFLSANI 246 >gi|24214596|ref|NP_712077.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira interrogans serovar Lai str. 56601] gi|45657856|ref|YP_001942.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195567|gb|AAN49095.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Leptospira interrogans serovar Lai str. 56601] gi|45601096|gb|AAS70579.1| succinate dehydrogenase iron-sulfur subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 243 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 83/255 (32%), Gaps = 34/255 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W +GE + +Y +P+ +D +L G + Sbjct: 6 KVWRQKSGETKGKIVDYNAKDISPNMSFLEMLDVVNEELITKG--------------EDP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICGSC + I+G +C M+ K VY P V+K Sbjct: 52 IAFEHDCREGICGSCNLMINGQAHGPHQGVTSCQLHMRSFKDGDTVYVEPWRAKAFPVLK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + T A L D C+ C C SC Sbjct: 112 DLVVDRSAFDRIIQAGGFISVNTGGAPDANALPIPKVDADVSMDAATCIGCGACVASCK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + + D C C CPK Sbjct: 171 ---NASAMLFVSAKITHLGLLPQGKVEQKERVKKMINAMDQEGFGNCTNQYECEAVCPKS 227 Query: 241 LNPAKAIAKIKMMLL 255 + I + + Sbjct: 228 IK-RDFIRTLNRDYI 241 >gi|254445680|ref|ZP_05059156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Verrucomicrobiae bacterium DG1235] gi|198259988|gb|EDY84296.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Verrucomicrobiae bacterium DG1235] Length = 255 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 84/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W E + Y NP+ MD DL + G D Sbjct: 6 RVWRQKNNETEGRFENYEAKDLNPNMSFLEMMDVVNEDLTDSG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG+C IDG C M+ K + P ++K Sbjct: 52 IAFAHDCREGICGTCSCMIDGKPHGPEHGVATCQTYMRSFKDGDTITVEPFRAKAFPIVK 111 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLV D + F Q ++T + A + E C+ C C +C Sbjct: 112 DLVTDRASFDKIQQAGGFITIRTGAAPDANSIPIGKEIADLAMDAAACIGCGACVAACK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + L + E L + D C C+ +CPK Sbjct: 171 ---NASAMLFVSAKAGQLNLLPQGKPEKDRRVLSMVAAMDEAGFGNCTNQYECSAACPKL 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + I+K+ + + Sbjct: 228 IS-EEFISKLNRDFVGATV 245 >gi|323343713|ref|ZP_08083940.1| fumarate reductase subunit B [Prevotella oralis ATCC 33269] gi|323095532|gb|EFZ38106.1| fumarate reductase subunit B [Prevotella oralis ATCC 33269] Length = 251 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N K DT+ + L+ L + ++ CREGI Sbjct: 8 TLKVWRQN-GPKAKGHFDTFEMKDIPGDTSFLEMLDILNEQLIEDNKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKD +VD F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFSDGDVITVEPWRSAAFPVIKDCMVDRGAFDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T P+ A +L E+ + C+ C C +C N L Sbjct: 127 IIQAGGYVSVRTGQPQDANAILIPKENADEAMDCATCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L R E + + C C CPK + A IA++ Sbjct: 183 SSKVSQLALLPQGRPEAARRAKAMVMKMEELGFGNCTNTRACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIVAKL 249 >gi|255689844|ref|ZP_05413519.1| fumarate reductase, iron-sulfur protein [Bacteroides finegoldii DSM 17565] gi|260624448|gb|EEX47319.1| fumarate reductase, iron-sulfur protein [Bacteroides finegoldii DSM 17565] Length = 251 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQ-AGPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISERKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIAKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIRAKL 249 >gi|282891626|ref|ZP_06300115.1| hypothetical protein pah_c186o013 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498489|gb|EFB40819.1| hypothetical protein pah_c186o013 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 258 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 19/244 (7%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK-------NKIDPTLTLRRSCRE 82 ++YR +P G + + + L V+ L+ I+ KI + + C E Sbjct: 7 LKVYRGHP---GKQYWEEFELKLVPS-ANVISALMEIQCNPVNREGKIVEPVVWEQGCLE 62 Query: 83 GICGSCGMNIDGTNTLACVK-----DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 +CGSC M I+G AC + I + P +++DL+VD + + Sbjct: 63 EVCGSCSMLINGYPRQACTALIQTIIDETGNRTITLSPFSKFPLVRDLIVDRGVMFDNLK 122 Query: 138 SIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + W+ + + ++ + L C+ C CC +CP NS +++GP I+ Sbjct: 123 KVHAWVDVDNTYNHGPGPKIDPRKQEVMYSLSTCMTCGCCVEACPQVNENS-KFVGPQIM 181 Query: 197 LQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 Q + + + + +RL L + + C NC + CPKG+ +IA + + Sbjct: 182 AQVRLFNANPVGKYQRQKRLRPLMEEGGVSDCGNAQNCVRVCPKGVPLTDSIAVVGRQVT 241 Query: 256 DRKI 259 + + Sbjct: 242 MQAL 245 >gi|308273684|emb|CBX30286.1| hypothetical protein N47_D30950 [uncultured Desulfobacterium sp.] Length = 254 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 80/246 (32%), Gaps = 23/246 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R ++ Y + L+ + I ++ + CREGI Sbjct: 8 TLRVWRQK-GPDSAGKLEIYNAKNISTDMSFLEMIDVINEQLTLEGKEPIAFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG CG ++G C M+ + P +IKDL VD S Sbjct: 67 CGMCGAVVNGRPHGPEKGTTLCQLHMRHFSDGDTIVIEPWRSRAFKLIKDLAVDRSALDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A + S E +K C+ C C +CP N+ L Sbjct: 127 IIQAGGYVSVNTGGAPDANAMPISQETAEKAMDAAACIGCGACVAACP----NASAMLFA 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E ++ + D C C CPK ++ IA++ Sbjct: 183 SAKISQLALLPQGKPEAAKRAIEMVRTMDKLGFGNCTNERECEAECPKEISIVN-IARMN 241 Query: 252 MMLLDR 257 Sbjct: 242 REFFKA 247 >gi|189460244|ref|ZP_03009029.1| hypothetical protein BACCOP_00881 [Bacteroides coprocola DSM 17136] gi|189433105|gb|EDV02090.1| hypothetical protein BACCOP_00881 [Bacteroides coprocola DSM 17136] Length = 251 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N K DT+ + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQN-GPKEKGHFDTFQMKDIPGDTSFLEMLDILNEQLIEEGKEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFKDGDVITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGFISVRTGAPQDANAILIPKPVADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKCVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIKAKL 249 >gi|282880573|ref|ZP_06289280.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella timonensis CRIS 5C-B1] gi|281305676|gb|EFA97729.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella timonensis CRIS 5C-B1] Length = 252 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 80/249 (32%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + +R N DT+ + L+ L + ++ CREGI Sbjct: 8 TIKFWRQNGPKD-KGHFDTHEMKNIPDDTSFLEMLDILNEELIKDGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+G C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGVPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRAAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++T + A +L E+ + C+ C C +C N L Sbjct: 127 KIIAAGGYNTIRTGQAQDANAILIPKENADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK + A IA++ Sbjct: 183 VSSKVSQLALLPQGRPEAAKRAKAMVLKMDELGFGNCTNTRACEAVCPKNESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREFITAKL 250 >gi|188994362|ref|YP_001928614.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Porphyromonas gingivalis ATCC 33277] gi|188594042|dbj|BAG33017.1| fumarate reductase iron-sulfur protein [Porphyromonas gingivalis ATCC 33277] Length = 251 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREG 83 +++R K +TY + + L+ + + + + CREG Sbjct: 7 ISVKVWRQK-GPKEKGHFETYQLQNISQSASFLEMMDILNEQLIKEHKAPVVFDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C + I+G C M+ + P VI+DL+VD S + Sbjct: 66 ICGMCSLYINGHPHGLDDSITTCQLHMRRFDDGDTITIEPWRSAGFPVIRDLMVDRSAYD 125 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S + T A + S ++ + C+ C C+ +C N L Sbjct: 126 KIIQSGGFVSVNTGGIPDANAIPISKKNADEAMDAAACIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK ++ IA++ Sbjct: 182 VSAKVSQLALLPQGRIEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNVSI-SHIARL 240 Query: 251 KMMLLDRK 258 + K Sbjct: 241 NREYIVAK 248 >gi|222054980|ref|YP_002537342.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221564269|gb|ACM20241.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 252 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 85/253 (33%), Gaps = 25/253 (9%) Query: 24 EKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRR 78 + ++R P++ G +TY L+ + + + + Sbjct: 5 KTMTLTLNVWRQKGPNDPGK--FETYTAKGITEHHSFLEMIDVVNEDLIKSGKEPIVFDH 62 Query: 79 SCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 CREGICG C ++G C M+ K ++ P +IKDLVVD Sbjct: 63 DCREGICGMCSQVVNGVPHGGQERTTVCQLHMRKFKDGDTIFIEPWRATAFPIIKDLVVD 122 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S + + ++ T +L D EC+ C C+ +CP N Sbjct: 123 RSAYDTIIQAGGYTSCHTGGVPDGNAVLVPKPDADYAMDAAECIGCGACAAACP----NG 178 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + C C +CPKG++ K Sbjct: 179 SAMLFTSAKVAQLAALPQGKVEAAARVKAMVETMQECGFGNCSNHYECQAACPKGID-VK 237 Query: 246 AIAKIKMMLLDRK 258 IA++ L + Sbjct: 238 FIARLNREYLKAQ 250 >gi|195953116|ref|YP_002121406.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobaculum sp. Y04AAS1] gi|195932728|gb|ACG57428.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Hydrogenobaculum sp. Y04AAS1] Length = 224 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 22/231 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 I R++ +Y +D VL+ L IK +IDPTL+ R CR GICG+C Sbjct: 3 VSIKRYD-------TFQSYEIDAPR-DITVLELLHKIK-EIDPTLSYRHMCRAGICGTCA 53 Query: 90 MNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + ++G N LAC K I + PL + VIKDLVV+ H++ +++++ K Sbjct: 54 LKVNGKNVLACKTRLNKFEDETIVLEPLDNAVVIKDLVVEHQHWFDMYKNLKVDFKNSDY 113 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + D + I+ C+ C C++ CP ++ GP + + Y +L D+R+ Sbjct: 114 QYF--------DFKSIENSKNCIACFICNSVCPVMP-IDKKFGGPFVFARIYGFLEDNRN 164 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L D + C NC +CP + P I +++ +L+ + + Sbjct: 165 TNKD--YAKLVD-GVINHCTHCKNCNYACPLFVMPETLIKRLEDILISKGL 212 >gi|212550812|ref|YP_002309129.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549050|dbj|BAG83718.1| fumarate reductase iron-sulfur binding subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 251 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 25/250 (10%) Query: 28 KEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 R++R P K +T+ ++ + L+ L + ++ + CRE Sbjct: 7 ISVRVWRQKCP--KAKGFFETHRLNNISGSTSFLEMLDILNEQLIREGKEPVAFDNDCRE 64 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF 132 GICG C + I+G C M+ + + P VI+DL+VD F Sbjct: 65 GICGMCSLYINGRPHGPDNLITTCQLHMRHFEDGSTITVEPWRSAAFPVIRDLMVDRYAF 124 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T A + S D + C+ C C +C N L Sbjct: 125 DKIMQAGGYISVNTGGGPDANAIPISKIDADEAMDAASCIGCGACVAACK----NGSAML 180 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L R E + + D C C CPKG++ IA+ Sbjct: 181 FVSAKVSQLALLPQGRVEAKARAKAMIAKMDELGFGNCTNTRACELECPKGVSI-SHIAR 239 Query: 250 IKMMLLDRKI 259 + L K+ Sbjct: 240 LNREFLKAKL 249 >gi|320106247|ref|YP_004181837.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Terriglobus saanensis SP1PR4] gi|319924768|gb|ADV81843.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Terriglobus saanensis SP1PR4] Length = 259 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 17/250 (6%) Query: 24 EKNLKEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPM------VLDGLLYIKNKIDPTLTL 76 + R P+ ++ + + + + + + K +T Sbjct: 7 APKTIRVEVKRQATPEAAA--FVEKFEFPYRSGMNITSLLGEIAMAPITSEGKQTTAVTY 64 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDM-----KDIKGAIAVYPLPHMSVIKDLVVDMSH 131 +C E ICGSC M I+G +AC + + G I++ PL V++DL VD S Sbjct: 65 DSNCLEEICGSCAMLINGKARMACSALVDKLMAETKDGTISLAPLSKFPVVRDLAVDRSV 124 Query: 132 FYSQHRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + + ++ W+ Q + +++ L C+ C C CP + + + Sbjct: 125 LFENLKKVQAWVPIDGSYDLGPGPRQFPQIQEERYPLSNCISCTICMEVCPQFNEATG-F 183 Query: 191 LGPAILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +G A + QA + +D + ERL L + C NC Q+CPK L +AI+ Sbjct: 184 VGAATIAQAKLFNMDPAGAVLKEERLRALAGDGGIQECGFAQNCVQACPKQLPLTEAISD 243 Query: 250 IKMMLLDRKI 259 + + +++ Sbjct: 244 MGRDVFVQQV 253 >gi|34541264|ref|NP_905743.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Porphyromonas gingivalis W83] gi|34397580|gb|AAQ66642.1| fumarate reductase, iron-sulfur protein [Porphyromonas gingivalis W83] Length = 251 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREG 83 +++R K +TY + + L+ + + + + CREG Sbjct: 7 ISVKVWRQK-GPKEKGHFETYQLQNISQSASFLEMMDILNEQLIKEHKAPVVFDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C + I+G C M+ + P VI+DL+VD S + Sbjct: 66 ICGMCSLYINGHPHGPDDSITTCQLHMRRFDDGDTITIEPWRSAGFPVIRDLMVDRSAYD 125 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S + T A + S ++ + C+ C C+ +C N L Sbjct: 126 KIIQSGGFVSVNTGGIPDANAIPISKKNADEAMDAAACIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK ++ IA++ Sbjct: 182 VSAKVSQLALLPQGRIEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNVSI-SHIARL 240 Query: 251 KMMLLDRK 258 + K Sbjct: 241 NREYIVAK 248 >gi|294055269|ref|YP_003548927.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Coraliomargarita akajimensis DSM 45221] gi|293614602|gb|ADE54757.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Coraliomargarita akajimensis DSM 45221] Length = 257 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 23/247 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT----LTLRRSCREGI 84 R++R + Y ++ + L+ L + K+ + CREGI Sbjct: 8 TLRVWRQKNRLDV-GKFEEYKLEGISEDSSFLEMLDILSEKLVADGHEAVAFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C M I+G AC M+ K + P V+KDL+VD + + Sbjct: 67 CGMCSMTINGVPHGPESGTTACQLHMRHFKDGDTITIEPWRAKAFPVLKDLIVDRTPLDA 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + S A + + + C+ C C +CP N+ L Sbjct: 127 IIQAGGFITARAGSAVDANAMPIAKQTADYAMDAAACIGCGACVAACP----NASAMLFT 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L + D C I C CPK ++ IA++ Sbjct: 183 SAKVAHMNSLPQGKAEKDRRTLAMVSTMDGQGFGGCTNIGECEAVCPKLISL-DMIAQLN 241 Query: 252 MMLLDRK 258 K Sbjct: 242 RDYAVAK 248 >gi|150003809|ref|YP_001298553.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides vulgatus ATCC 8482] gi|212692593|ref|ZP_03300721.1| hypothetical protein BACDOR_02090 [Bacteroides dorei DSM 17855] gi|237709095|ref|ZP_04539576.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 9_1_42FAA] gi|254880964|ref|ZP_05253674.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_3_47FAA] gi|265752618|ref|ZP_06088187.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 3_1_33FAA] gi|294777372|ref|ZP_06742823.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides vulgatus PC510] gi|319639972|ref|ZP_07994699.1| fumarate reductase iron-sulfur protein [Bacteroides sp. 3_1_40A] gi|149932233|gb|ABR38931.1| fumarate reductase iron-sulfur cluster protein subunit [Bacteroides vulgatus ATCC 8482] gi|212664878|gb|EEB25450.1| hypothetical protein BACDOR_02090 [Bacteroides dorei DSM 17855] gi|229456791|gb|EEO62512.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 9_1_42FAA] gi|254833757|gb|EET14066.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_3_47FAA] gi|263235804|gb|EEZ21299.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 3_1_33FAA] gi|294448440|gb|EFG16989.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides vulgatus PC510] gi|317388250|gb|EFV69102.1| fumarate reductase iron-sulfur protein [Bacteroides sp. 3_1_40A] Length = 251 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 81/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R DT+ + L+ + + ++ + CREGI Sbjct: 8 TLKVWRQKGPKD-KGHFDTFQMKDIPGDTSFLEMMDILNEQLINEGKEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P VI+DL+VD S + Sbjct: 67 CGMCSMYINGHPHGPATGATTCQIYMRRFKDGDTITVEPWRSAGFPVIRDLMVDRSAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A + + + C+ C C +C N L Sbjct: 127 IMQAGGYVSINTGGIPDANAIPIAKPIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLALLPQGKVEAARRAKAMLSKMDELGFGNCTNTRACEAECPKLVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIAAKL 249 >gi|162454837|ref|YP_001617204.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Sorangium cellulosum 'So ce 56'] gi|161165419|emb|CAN96724.1| Succinate dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 257 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 81/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 ++R TY V + L+ L + ++ + + CREGI Sbjct: 4 TLHVWRQK-GKYEAGRFVTYEVPDVSEHMSFLEMLDVLNQRLILKGEEPIAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG CG I+G C M+ K ++ P V+ DL VD S F Sbjct: 63 CGMCGFMINGQAHGPLRGTTVCQLHMRHYKDGDVLWLEPWRAQAFPVVSDLAVDRSAFDR 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 S + T S A + ++ C+ C C SCP+ + L Sbjct: 123 IIASGGFVSVSTGSAPDANAIPVPKVVAERAMDAAACIGCGACVASCPNASAS----LFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L E L+ + C + C CPK + P IAK+ Sbjct: 179 AAKLTHLNLLPQGEPERDQRSLNMVAQMRVEGFGHCTNVGECEAVCPKEI-PLDMIAKMN 237 Query: 252 MMLLDRKI 259 L + Sbjct: 238 RDYLRATL 245 >gi|189464625|ref|ZP_03013410.1| hypothetical protein BACINT_00968 [Bacteroides intestinalis DSM 17393] gi|189436899|gb|EDV05884.1| hypothetical protein BACINT_00968 [Bacteroides intestinalis DSM 17393] Length = 251 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGNEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T SP+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGSPQDANAILIPKQIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|326798817|ref|YP_004316636.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Sphingobacterium sp. 21] gi|326549581|gb|ADZ77966.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Sphingobacterium sp. 21] Length = 259 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 77/258 (29%), Gaps = 34/258 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W + + + D +D DL G + Sbjct: 12 KVWRQKNENTKGKFVTIQANGISSDMSFLEMLDVVNEDLTRKG--------------EDP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C ++I+G C M+ + P VIK Sbjct: 58 IYFDHDCREGICGMCSLHINGQPHGPKQGTTTCQLHMRSFHDGQTIVIEPWRAAAFPVIK 117 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD + F Q + T + + C+ C C +C Sbjct: 118 DLAVDRTAFDRIQQAGGYVSVNTGGVPDGNAIPIPKPKADEAFESATCIGCGACVAACK- 176 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + Y L + E + + + D C C CP G Sbjct: 177 ---NASAMLFVSAKISQYALLPQGQAERYQRAQAMVEQMDKEGFGACTVTKACEAECPVG 233 Query: 241 LNPAKAIAKIKMMLLDRK 258 + IA++ + K Sbjct: 234 IKLTN-IARMNRDYFNAK 250 >gi|53715832|ref|YP_101824.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fragilis YCH46] gi|60683752|ref|YP_213896.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fragilis NCTC 9343] gi|253564637|ref|ZP_04842094.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 3_2_5] gi|265764699|ref|ZP_06092974.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_16] gi|31540477|gb|AAO42601.1| fumarate reductase iron-sulfur cluster protein subunit [Bacteroides fragilis] gi|52218697|dbj|BAD51290.1| fumarate reductase iron-sulfur cluster protein subunit [Bacteroides fragilis YCH46] gi|60495186|emb|CAH10007.1| fumarate reductase iron-sulfur protein [Bacteroides fragilis NCTC 9343] gi|251948413|gb|EES88695.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 3_2_5] gi|263254083|gb|EEZ25517.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_16] gi|301165337|emb|CBW24909.1| fumarate reductase iron-sulfur protein [Bacteroides fragilis 638R] Length = 251 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + +I + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQIINDGGEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VI+DL+VD S + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQMYMRRFKDGDTITVEPWRSAGFPVIRDLMVDRSAYDK 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + +D + C+ C C +C N L Sbjct: 127 IMQAGGYVSVNTGAPQDANAILISKDIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKVEAARRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|303238025|ref|ZP_07324568.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella disiens FB035-09AN] gi|302481815|gb|EFL44867.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella disiens FB035-09AN] Length = 251 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 83/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 +++R N DT+ + L+ L + ++ CREGI Sbjct: 8 TLKVWRQN-GPTAQGHFDTFEMKDIPGDTSFLEMLDILNEQLIEDGQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C ++ + P VIKD +VD F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYIRRFNDGDVITVEPWRSAAFPVIKDCMVDRGAFDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T P+ A +L S ED + C+ C C +C N L Sbjct: 127 IIQAGGYTSIRTGQPQDANAILISKEDADEAMDCATCIGCGACVAACK----NGSAMLFL 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + + C C CPK + A IA++ Sbjct: 183 SSKVSQLALLPQGKLEAAKRAKAMIMKMEELGFGNCTNTRACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIKAKL 249 >gi|134081744|emb|CAK42002.1| unnamed protein product [Aspergillus niger] Length = 114 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 69/101 (68%), Positives = 86/101 (85%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 QS E+R+K+DGLYEC++CACCSTSCPSYWWNS+ YLGPAILLQ+YRWL DSRDE E Sbjct: 11 NRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAE 70 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R L++ +YRCHTI+NC+++CPKGLNPA+AIA+IK M+ Sbjct: 71 RKAALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMM 111 >gi|197293560|gb|ACH58321.1| fumarate reductase [Haemophilus sp. CCUG 15794] Length = 163 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + +LGPA + Sbjct: 61 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLYP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|237724423|ref|ZP_04554904.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D4] gi|229437292|gb|EEO47369.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides dorei 5_1_36/D4] Length = 251 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R DT+ + L+ + + ++ + CREGI Sbjct: 8 TLKVWRQKGPKD-KGHFDTFQMKDIPGDTSFLEMMDILNEQLINEGKEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C M I+G C M+ K + P VI+DL+VD + Sbjct: 67 CGMCSMYINGHPHGPATGATTCQIYMRRFKDGDTITVEPWRSAGFPVIRDLMVDRGAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T A + + + C+ C C +C N L Sbjct: 127 IMQAGGYVSINTGGIPDANAIPIAKPIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLALLPQGKVEAARRAKAMLSKMDELGFGNCTNTRACEAECPKLVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIAAKL 249 >gi|227206190|dbj|BAH57150.1| AT3G27380 [Arabidopsis thaliana] Length = 184 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 63/108 (58%), Positives = 79/108 (73%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P +DR K+DG+YEC++CACCSTSCPSYWWN + YLGPA LL A RW+ D Sbjct: 75 KDCGPMVLDALIKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD 134 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 SRDE+ ERL+ ++D F+LYRCHTI+NC ++CPKGLNP K I IK + Sbjct: 135 SRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 182 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 36/157 (22%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ L + Sbjct: 47 SNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIK-----KDRAKLDGMYECIL 101 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 C C + + P + W+ Sbjct: 102 CACCSTSC----------PSYWWNPESYLGP------------------AALLHANRWIS 133 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 + KE L++ +D LY C C+ +CP Sbjct: 134 DSRDEYTKERLEAIDD---EFKLYRCHTILNCARACP 167 >gi|255012012|ref|ZP_05284138.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fragilis 3_1_12] gi|313149849|ref|ZP_07812042.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fragilis 3_1_12] gi|313138616|gb|EFR55976.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fragilis 3_1_12] Length = 251 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + +I + CREGI Sbjct: 8 TLKVWRQK-SPKAKGAFETYQMKDIPGDTSFLEMLDILNEQIINDGGEPIVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VI+DL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQMYMRRFKDGDTITVEPWRSAGFPVIRDLMVDRTAYDK 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + +D + C+ C C +C N L Sbjct: 127 IMQAGGYVSVNTGAPQDANAILISKDIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKVEAARRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|197293600|gb|ACH58341.1| fumarate reductase [Haemophilus sp. PN24] Length = 163 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 S ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHSSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|296437985|gb|ADH20146.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis G/11074] Length = 232 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C E +CGSC ++++G AC + + K I + L Sbjct: 20 PVNIHGERVDPVVWEQACLEEVCGSCAVSVNGIPRQACTALIHEHIDAKREIKLASLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C NC + CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNCVRVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|89257881|gb|ABD65219.1| fumarate reductase iron-sulfur protein [Haemophilus sp. COAD165] gi|197293574|gb|ACH58328.1| fumarate reductase [Haemophilus sp. CCUG 30047] gi|197293590|gb|ACH58336.1| fumarate reductase [Haemophilus sp. CCUG 44661] gi|197293592|gb|ACH58337.1| fumarate reductase [Haemophilus sp. 50565] gi|197293596|gb|ACH58339.1| fumarate reductase [Haemophilus sp. HK 676] Length = 163 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|30060773|gb|AAP19762.1| fumarate reductase [Haemophilus influenzae] gi|30060775|gb|AAP19763.1| fumarate reductase [Haemophilus influenzae] gi|30060777|gb|AAP19764.1| fumarate reductase [Haemophilus influenzae] gi|30060779|gb|AAP19765.1| fumarate reductase [Haemophilus influenzae] gi|30060781|gb|AAP19766.1| fumarate reductase [Haemophilus influenzae] gi|30060783|gb|AAP19767.1| fumarate reductase [Haemophilus influenzae] gi|30060787|gb|AAP19769.1| fumarate reductase [Haemophilus influenzae] gi|30060789|gb|AAP19770.1| fumarate reductase [Haemophilus influenzae] gi|30060791|gb|AAP19771.1| fumarate reductase [Haemophilus influenzae] gi|30060793|gb|AAP19772.1| fumarate reductase [Haemophilus influenzae] gi|30060797|gb|AAP19774.1| fumarate reductase [Haemophilus influenzae] gi|30060799|gb|AAP19775.1| fumarate reductase [Haemophilus influenzae] gi|30060801|gb|AAP19776.1| fumarate reductase [Haemophilus influenzae] gi|30060803|gb|AAP19777.1| fumarate reductase [Haemophilus influenzae] gi|30060805|gb|AAP19778.1| fumarate reductase [Haemophilus influenzae] gi|30060807|gb|AAP19779.1| fumarate reductase [Haemophilus influenzae] gi|30060809|gb|AAP19780.1| fumarate reductase [Haemophilus influenzae] gi|53655620|gb|AAU89310.1| fumarate reductase [Haemophilus influenzae] gi|53655649|gb|AAU89311.1| fumarate reductase [Haemophilus influenzae] gi|53655677|gb|AAU89312.1| fumarate reductase [Haemophilus influenzae] gi|89257879|gb|ABD65218.1| fumarate reductase iron-sulfur protein [Haemophilus sp. COAD036] gi|89257883|gb|ABD65220.1| fumarate reductase iron-sulfur protein [Haemophilus sp. COAD591] gi|197293554|gb|ACH58318.1| fumarate reductase [Haemophilus sp. CCUG 11096] gi|197293556|gb|ACH58319.1| fumarate reductase [Haemophilus sp. CCUG 13929] gi|197293562|gb|ACH58322.1| fumarate reductase [Haemophilus sp. CCUG 15949] gi|197293564|gb|ACH58323.1| fumarate reductase [Haemophilus sp. CCUG 17210] gi|197293566|gb|ACH58324.1| fumarate reductase [Haemophilus sp. CCUG 17783] gi|197293570|gb|ACH58326.1| fumarate reductase [Haemophilus sp. CCUG 23622] gi|197293572|gb|ACH58327.1| fumarate reductase [Haemophilus sp. CCUG 24145] gi|197293578|gb|ACH58330.1| fumarate reductase [Haemophilus sp. CCUG 30218] gi|197293580|gb|ACH58331.1| fumarate reductase [Haemophilus sp. CCUG 31732] gi|197293582|gb|ACH58332.1| fumarate reductase [Haemophilus sp. CCUG 32367] gi|197293588|gb|ACH58335.1| fumarate reductase [Haemophilus sp. CCUG 43251] gi|197293594|gb|ACH58338.1| fumarate reductase [Haemophilus haemolyticus] gi|197293598|gb|ACH58340.1| fumarate reductase [Haemophilus sp. HK855] gi|259490888|gb|ACW82428.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae] Length = 163 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|78223598|ref|YP_385345.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter metallireducens GS-15] gi|78194853|gb|ABB32620.1| succinate dehydrogenase subunit B [Geobacter metallireducens GS-15] Length = 251 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 80/255 (31%), Gaps = 34/255 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + Y +PD +D DL IK DP + Sbjct: 13 VWRQNGPKDPGKFEVYEAKNVSPDQSFLEMLDEVNEDL-------------IKAGKDP-I 58 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ K +Y P ++KD Sbjct: 59 AFDHDCREGICGMCSQVINGAPHGGQDRTTVCQLHMRMFKDGDTIYIEPWRARAFPIVKD 118 Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSY 183 LVVD + + ++ L +D EC+ C C CP Sbjct: 119 LVVDRAALDTIIQAGGYTSAHTGGVADGNALLVPKDIADYAMDAAECIGCGACVAGCP-- 176 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN--LEDPFRLYRCHTIMNCTQSCPKGL 241 N L + + L + E + + C C +CPKG+ Sbjct: 177 --NGSAMLFTSAKVSQLAVLPQGKAEAKRRVQEMTGALQECGFGNCTNHYECQAACPKGI 234 Query: 242 NPAKAIAKIKMMLLD 256 N K IA + L Sbjct: 235 N-VKFIATLNREYLK 248 >gi|224023529|ref|ZP_03641895.1| hypothetical protein BACCOPRO_00231 [Bacteroides coprophilus DSM 18228] gi|224016751|gb|EEF74763.1| hypothetical protein BACCOPRO_00231 [Bacteroides coprophilus DSM 18228] Length = 251 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N DT+ + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQNGPKD-KGHFDTFQMKDIPGDTSFLEMLDILNEQLVEEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VIKDL+VD S + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFKDGDVITVEPWRSAGFPVIKDLMVDRSAYDK 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGFISVRTGAPQDANAILIPKPIADEAMDAATCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMIAKMDELGFGNCTNTRACEAECPKCVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIKAKL 249 >gi|62125783|gb|AAX63805.1| fumarate reductase iron-sulfur protein [Haemophilus quentini] gi|197293552|gb|ACH58317.1| fumarate reductase [Haemophilus sp. 26E] Length = 163 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM I+ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMINNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|52354315|gb|AAU44478.1| hypothetical protein AT3G27370 [Arabidopsis thaliana] gi|52354317|gb|AAU44479.1| hypothetical protein AT3G27370 [Arabidopsis thaliana] Length = 150 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 62/100 (62%), Positives = 75/100 (75%) Query: 25 KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 NLK ++IYRWNPDN G P + Y +DL +CGPMVLD L+ IKN++DP+LT RRSCREGI Sbjct: 47 SNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGI 106 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD 124 CGSC MNIDG N LAC+ ++D + PLPHM VIKD Sbjct: 107 CGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKD 146 >gi|198274078|ref|ZP_03206610.1| hypothetical protein BACPLE_00215 [Bacteroides plebeius DSM 17135] gi|198273156|gb|EDY97425.1| hypothetical protein BACPLE_00215 [Bacteroides plebeius DSM 17135] Length = 251 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N K DT+ + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQN-GPKEKGHFDTFQMKDIPGDTSFLEMLDILNEQLIEDGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFKDGDVITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGFISVRTGAPQDANAILIPKPVADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMIAKMDELGFGNCTNTRACEAECPKCVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIKAKL 249 >gi|224537362|ref|ZP_03677901.1| hypothetical protein BACCELL_02240 [Bacteroides cellulosilyticus DSM 14838] gi|224520987|gb|EEF90092.1| hypothetical protein BACCELL_02240 [Bacteroides cellulosilyticus DSM 14838] Length = 251 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T SP+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGSPQDANAILIPKQIADEAMDAAACIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|257790028|ref|YP_003180634.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Eggerthella lenta DSM 2243] gi|325830059|ref|ZP_08163516.1| putative fumarate reductase iron-sulfur subunit [Eggerthella sp. HGA1] gi|257473925|gb|ACV54245.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Eggerthella lenta DSM 2243] gi|325487526|gb|EGC89964.1| putative fumarate reductase iron-sulfur subunit [Eggerthella sp. HGA1] Length = 234 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 11/235 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + + ++NP P TY ++ + M L L + N + SCR +CG C Sbjct: 2 KISVQKYNPSVDAEPYFGTYEIE--HTEHMTLLEALVVINDTIEPIAFDYSCRGRVCGRC 59 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS- 147 M ++GT LACV ++D G V PL H V++DL+VD + + I + Sbjct: 60 AMTLNGTPCLACVTLVED-AGKNEVTPLKHFPVVRDLIVDKTKVTDKVSRILARQRAFDL 118 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLGPAILLQAYRWLIDS 206 + +K++ L C C C+ +CP + Y+GP ++ D Sbjct: 119 NLDEIKAPVDAGLSEKLEPLEYCARCGVCTAACPVVEQKGFKSYIGPTGMIAIANRFYDP 178 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK--GLNPAKAIAKIKMMLLDRKI 259 D+ + +++ L+ C C C K ++ ++ + Sbjct: 179 YDQG-DRVVQAVQN--GLWECIECGMCDTVC-KALEIDHLSVWKDLRTAASAEGL 229 >gi|329962714|ref|ZP_08300637.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fluxus YIT 12057] gi|328529548|gb|EGF56451.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides fluxus YIT 12057] Length = 251 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAFDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|53655588|gb|AAU89309.1| fumarate reductase [Haemophilus influenzae] gi|197293576|gb|ACH58329.1| fumarate reductase [Haemophilus sp. CCUG 30048] gi|259490898|gb|ACW82433.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae] Length = 163 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMPLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|197293558|gb|ACH58320.1| fumarate reductase [Haemophilus sp. CCUG 15793] gi|197293568|gb|ACH58325.1| fumarate reductase [Haemophilus sp. CCUG 18082] gi|197293586|gb|ACH58334.1| fumarate reductase [Haemophilus sp. CCUG 36040] Length = 163 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGYMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|167763913|ref|ZP_02436040.1| hypothetical protein BACSTE_02295 [Bacteroides stercoris ATCC 43183] gi|167698029|gb|EDS14608.1| hypothetical protein BACSTE_02295 [Bacteroides stercoris ATCC 43183] Length = 251 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFITAKL 249 >gi|159901985|gb|ABX10715.1| succinate dehydrogenase iron-sulfur protein [uncultured planctomycete 13FN] Length = 249 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 81/245 (33%), Gaps = 23/245 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 I+R P + +T+ D + L+ L + ++ + CREGI Sbjct: 4 TLHIWRQ-PSGSDSGEFETHENDNISDEMSFLEMLDQVNMQLTGGGRSEVAFEHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+C + I+G C M+ ++ P + KDL+VD S F Sbjct: 63 CGTCSLVINGVPHGPETGATTCQTYMRSFDDGSEIWIEPYRAKSFPITKDLIVDRSAFDR 122 Query: 135 -QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + T S A + + ++ C+ C C +C N+ L Sbjct: 123 IQQAGGFVSVNTGSAPDANAIPIARAVSEQAMDSAACIGCGACVAAC----SNASASLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L E + + D C C CPK ++ IA++ Sbjct: 179 GAKVAHLATLPQGETERRERVQKIVAQMDDEMFGSCSNHGECEAVCPKNISVG-VIAQMN 237 Query: 252 MMLLD 256 L Sbjct: 238 REYLR 242 >gi|30060785|gb|AAP19768.1| fumarate reductase [Haemophilus influenzae] gi|30060795|gb|AAP19773.1| fumarate reductase [Haemophilus influenzae] gi|197293584|gb|ACH58333.1| fumarate reductase [Haemophilus sp. CCUG 35214] Length = 163 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMPLLNSKNGVWSCTFVGYCSEVCPKH 163 >gi|308235192|ref|ZP_07665929.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Gardnerella vaginalis ATCC 14018] Length = 388 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 108/282 (38%), Gaps = 64/282 (22%) Query: 40 KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC------------------- 80 G + Y + +LD LL IK IDPTL R SC Sbjct: 106 SGKHWIQDYTIRARKND-TILDCLLKIKRTIDPTLAFRYSCGHGVCGSDAANVNGMPTLL 164 Query: 81 -------------REGICGSCGMNIDG--------TNTLACVKDMKDIKGA--------- 110 + S G G T T ++ + Sbjct: 165 CTATIAQNARQNTQTQGVRSSGFRKTGSVKSQATATPTPTADENHNLQVQSQEISSLIQN 224 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--------ELLQS 157 I V PL + +DL+ D+S +Q + +EP+L+ + E LQ Sbjct: 225 GSFGIIEVAPLSGFPIQRDLICDLSPMIAQLKRLEPYLQAQDVQTRNSSGKLAIIEFLQH 284 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E K + L C+MC C CP Y + ++GPA L+ A R++ DSRD RLD Sbjct: 285 PEQLAKFELLSNCIMCGVCEGICPVY-AGGEAFIGPAALINAARFINDSRDNATNRRLDL 343 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + C ++ C++ CP+G++ + I ++ ++ +RK+ Sbjct: 344 ADSSDGISACQSVRACSRQCPRGIDVGEEIWQLTTLINERKM 385 >gi|197293548|gb|ACH58315.1| fumarate reductase [Haemophilus sp. 11PS] Length = 163 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM I+ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMINNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPYPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|288800541|ref|ZP_06405999.1| fumarate reductase, iron-sulfur protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332754|gb|EFC71234.1| fumarate reductase, iron-sulfur protein [Prevotella sp. oral taxon 299 str. F0039] Length = 251 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N K D++ + L+ L + ++ CREGI Sbjct: 8 TLKVWRQN-GPKAKGHFDSFEMKDIPTDTSFLEMLDILNEQLIEEGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKD +VD F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRGAFDK 126 Query: 135 QHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ +T P+ A +L +D + C+ C C +C N L Sbjct: 127 IIQAGGYVTVRTGQPQDANSILIPKQDADEAMDCATCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + + C C CPK + A IA++ Sbjct: 183 SSKVSQLALLPQGKPEAARRAKAMMLKMEELGFGNCTNTQACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIMAKL 249 >gi|153807010|ref|ZP_01959678.1| hypothetical protein BACCAC_01287 [Bacteroides caccae ATCC 43185] gi|149130130|gb|EDM21340.1| hypothetical protein BACCAC_01287 [Bacteroides caccae ATCC 43185] Length = 251 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQ-AGPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISERKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPVADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|261878872|ref|ZP_06005299.1| fumarate reductase [Prevotella bergensis DSM 17361] gi|270334552|gb|EFA45338.1| fumarate reductase [Prevotella bergensis DSM 17361] Length = 252 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 85/249 (34%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R +R N K DT+ + G L+ L + ++ CREGI Sbjct: 8 TLRFWRQN-GPKAQGYFDTHEMKDIPDGTSFLEMLDILNEELIEAGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRTAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++T + A +L S E + C+ C C +C N L Sbjct: 127 KIIAAGGYTTVRTGQAQDANAILISKEAADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + + + C C +CPK + A IA++ Sbjct: 183 LSSKVSQLALLPQGRPEAAKRVKNMIDKMEELGFGNCTNTRACEAACPKNESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREYIAAKL 250 >gi|197123418|ref|YP_002135369.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter sp. K] gi|220918222|ref|YP_002493526.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|196173267|gb|ACG74240.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|219956076|gb|ACL66460.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 269 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 76/256 (29%), Gaps = 34/256 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + Y P + +D DL IK DP + Sbjct: 17 VWRQAGPNEPGRFETYDAKGITPHHSFLEMLDVVNEDL-------------IKQGKDP-I 62 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG+C ++G C M+ K A+Y P +IKD Sbjct: 63 VFDHDCREGICGACSAVVNGVPHGGYKRTTLCQLHMRKFKDGDAIYLEPWRARAFPIIKD 122 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD ++ T EC+ C C +CP Sbjct: 123 LMVDRGALDRLIQAAGWTSAHTGGVPDGNSTPIPKRAADYAMDAAECIGCGACVAACP-- 180 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N L + L + E + C C +CPKG+ Sbjct: 181 --NGAAMLFAGAKVSQLAELPQGQVEAPERVAAMIQAMADNGFGNCSNHYECEAACPKGI 238 Query: 242 NPAKAIAKIKMMLLDR 257 + K IA++ Sbjct: 239 D-VKFIARLNREFRKA 253 >gi|196231966|ref|ZP_03130822.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chthoniobacter flavus Ellin428] gi|196224088|gb|EDY18602.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chthoniobacter flavus Ellin428] Length = 249 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 80/247 (32%), Gaps = 22/247 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R D K + + L+ L + + + + CREGI Sbjct: 4 NLKVWRQK-DAKSDGRLVDIEARNIPEDCSFLEMLDIVNEDLLGKGEEPIAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS- 134 CG+C + IDG C M+ K +Y P +++DLVVD S F Sbjct: 63 CGTCSLTIDGVPHGPSETTTCQLYMRKFKDGDTIYVEPFRARPFPILRDLVVDRSAFDRI 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 Q +T S L C+ C C +CP N+ L Sbjct: 123 QQAGGFITARTGSAVDGNTLPIGKPIADAAMEAAACIGCGACVAACP----NASAMLFVG 178 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E L + D C + C CP + PA I+++ Sbjct: 179 AKVSHLALLPQGQAERTSRALKMVRTMDEEGFGNCSNYLECEAVCPAEI-PASVISRLNR 237 Query: 253 MLLDRKI 259 + Sbjct: 238 EYAKASV 244 >gi|150401146|ref|YP_001324912.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanococcus aeolicus Nankai-3] gi|150013849|gb|ABR56300.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus aeolicus Nankai-3] Length = 538 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 41/247 (16%) Query: 42 NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACV 101 N Y+V VL+ L YI + + R SCR G CGSC M I+ LAC Sbjct: 11 NGVFKEYFVP---NNITVLEALEYINKTYNENIQYRASCRAGQCGSCAMTINNEPKLACK 67 Query: 102 KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-- 159 ++ + PL + VIKDL+VD +Y + +I +++ + E +Q+ E Sbjct: 68 TKVEHNT---TIEPLKNFIVIKDLIVDREQYYKKLNNIRNYVENEKEIFSGENIQNKEDT 124 Query: 160 ---------------------------DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 D I + C+ C C + CP+ + Y G Sbjct: 125 INDSENTENNKIDTLKDKTITAINSAGDITNIKKIRGCIDCLSCLSKCPAKEF--SEYPG 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-KAIAKIK 251 P ++ Q R+ D RD + E+ L C T C + CPK ++ A+ K++ Sbjct: 183 PTLMRQIARFAFDKRDNINRCEMAFFEN---LPNCTTCGKCVEVCPKEIDIVHNAVEKLR 239 Query: 252 MMLLDRK 258 + Sbjct: 240 AKAFENG 246 >gi|68171604|ref|ZP_00544974.1| Succinate dehydrogenase (ubiquinone) [Ehrlichia chaffeensis str. Sapulpa] gi|67998971|gb|EAM85652.1| Succinate dehydrogenase (ubiquinone) [Ehrlichia chaffeensis str. Sapulpa] Length = 86 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 69/86 (80%), Positives = 76/86 (88%) Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 MCACCSTSCPSYWWNSD+YLGPA LLQAYRWLIDSRDE RLD L+D F+LYRCHTIM Sbjct: 1 MCACCSTSCPSYWWNSDKYLGPAALLQAYRWLIDSRDEASDSRLDVLDDAFKLYRCHTIM 60 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDR 257 NCT++CPKGLNPAKAIA IK M++ R Sbjct: 61 NCTKTCPKGLNPAKAIAHIKQMMVRR 86 >gi|312130756|ref|YP_003998096.1| succinate dehydrogenase and fumarate reductase iroN-sulfur protein [Leadbetterella byssophila DSM 17132] gi|311907302|gb|ADQ17743.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Leadbetterella byssophila DSM 17132] Length = 254 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 82/259 (31%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W E +L++Y + +PD D +L + G Sbjct: 11 KVWKQKNAESKGHLEDYTVKNVSPDMSFLEMFDVLNEELIHEGK--------------EP 56 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG C M I+G C M+ K V P V+K Sbjct: 57 IAFDHDCREGICGMCSMYINGRPHGPLEGVTTCQLHMRSFKDGDTVVVEPWRATAFPVVK 116 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD + F S L E C+ C C +C Sbjct: 117 DLVVDRTAFDRIIASGGYVSVNTGNAQDANNLPIGKEKADLAFAAAACIGCGACVAACK- 175 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E Q L+ + D C C CPK Sbjct: 176 ---NASAMLFVSAKVSQLALLPQGQPERQTRALNMVAQMDAEGFGSCTNTGACAAECPKE 232 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA++ L + Sbjct: 233 ISL-DNIARLNREFLSASL 250 >gi|311114848|ref|YP_003986069.1| succinate dehydrogenase [Gardnerella vaginalis ATCC 14019] gi|310946342|gb|ADP39046.1| succinate dehydrogenase [Gardnerella vaginalis ATCC 14019] Length = 395 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 108/282 (38%), Gaps = 64/282 (22%) Query: 40 KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC------------------- 80 G + Y + +LD LL IK IDPTL R SC Sbjct: 113 SGKHWIQDYTIRARKND-TILDCLLKIKRTIDPTLAFRYSCGHGVCGSDAANVNGMPTLL 171 Query: 81 -------------REGICGSCGMNIDG--------TNTLACVKDMKDIKGA--------- 110 + S G G T T ++ + Sbjct: 172 CTATIAQNARQNTQTQGVRSSGFRKTGSVKSQATATPTPTADENHNLQVQSQEISSLIQN 231 Query: 111 -----IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--------ELLQS 157 I V PL + +DL+ D+S +Q + +EP+L+ + E LQ Sbjct: 232 GSFGIIEVAPLSGFPIQRDLICDLSPMIAQLKRLEPYLQAQDVQTRNSSGKLAIIEFLQH 291 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E K + L C+MC C CP Y + ++GPA L+ A R++ DSRD RLD Sbjct: 292 PEQLAKFELLSNCIMCGVCEGICPVY-AGGEAFIGPAALINAARFINDSRDNATNRRLDL 350 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + C ++ C++ CP+G++ + I ++ ++ +RK+ Sbjct: 351 ADSSDGISACQSVRACSRQCPRGIDVGEEIWQLTTLINERKM 392 >gi|218131615|ref|ZP_03460419.1| hypothetical protein BACEGG_03235 [Bacteroides eggerthii DSM 20697] gi|317474751|ref|ZP_07934025.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides eggerthii 1_2_48FAA] gi|319900684|ref|YP_004160412.1| succinate dehydrogenase subunit B [Bacteroides helcogenes P 36-108] gi|329956505|ref|ZP_08297102.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides clarus YIT 12056] gi|217985918|gb|EEC52257.1| hypothetical protein BACEGG_03235 [Bacteroides eggerthii DSM 20697] gi|316909432|gb|EFV31112.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Bacteroides eggerthii 1_2_48FAA] gi|319415715|gb|ADV42826.1| succinate dehydrogenase subunit B [Bacteroides helcogenes P 36-108] gi|328524402|gb|EGF51472.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides clarus YIT 12056] Length = 251 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|29348464|ref|NP_811967.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides thetaiotaomicron VPI-5482] gi|253569169|ref|ZP_04846579.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 1_1_6] gi|298385833|ref|ZP_06995390.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 1_1_14] gi|29340368|gb|AAO78161.1| succinate dehydrogenase iron-sulfur protein [Bacteroides thetaiotaomicron VPI-5482] gi|251841188|gb|EES69269.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 1_1_6] gi|298261061|gb|EFI03928.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 1_1_14] Length = 251 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQ-AGPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISERKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|260172944|ref|ZP_05759356.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D2] gi|315921224|ref|ZP_07917464.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D2] gi|313695099|gb|EFS31934.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D2] Length = 251 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQ-AGPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISERKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFQDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIAKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|291286852|ref|YP_003503668.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Denitrovibrio acetiphilus DSM 12809] gi|290884012|gb|ADD67712.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Denitrovibrio acetiphilus DSM 12809] Length = 231 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 11/234 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + IY++NPD + YV++D M + + ++ P + SC CG C Sbjct: 2 KLEIYKYNPDVDNSASY--VYVNIDYKDKMTVLEAIQFAHEKTP-IHFDYSCHGRACGRC 58 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH-RSIEPWLKTVS 147 + DGT LAC+ + G + P+ +V++DL++D S ++ + Sbjct: 59 SVVYDGTPVLACITPIT--DGDHTIEPMKGHTVLRDLIIDKSEAHADLSQRYRRTRAVNL 116 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E + ++I + C C C+ CP+Y N Y+GPA +L D Sbjct: 117 TEEQIETIYDTSVAEQISAIEWCTRCMMCTAMCPAYKANPSTYVGPAAMLATAYRYYDPY 176 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCP-KGLNPAKAI-AKIKMMLLDRKI 259 DE R++ L+ C C CP K + I ++ D + Sbjct: 177 DEGS--RVNEAVQS-GLWNCIMCGQCDYVCPQKEIERVSQIWKDLREAATDAGL 227 >gi|189347912|ref|YP_001944441.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobium limicola DSM 245] gi|189342059|gb|ACD91462.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 257 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 79/259 (30%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + Y++ + + +D L G Sbjct: 6 KIWRQKNAKARGEMVSYQVSGISAEISFFEMLDMLNQQLIAEGG--------------DP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C + I+G C M+ ++ P V++ Sbjct: 52 VAFDHDCREGICGTCSLYINGRPHGPVRGVTTCQLHMRSFSDGEVIHIEPWRSKAFPVVR 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S ++ + + A + C+ C C +CP+ Sbjct: 112 DLVVDRSALDLIIQAGGYVSVNSGGIPDANTIPVPKHHADTAFDAAACIGCGACVAACPN 171 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 L + + L + E + D C C CPK Sbjct: 172 AAA----MLFVSAKVSHLSLLPQGKAEAVKRVQKMVARMDELGFGNCSNTYACEVECPKL 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA++ L K+ Sbjct: 228 ISVTN-IARMNREFLSAKL 245 >gi|197293550|gb|ACH58316.1| fumarate reductase [Haemophilus sp. 16N] Length = 163 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM I+ LAC ++D G + + PL + + +DLVVD+SHF +++P++ Sbjct: 1 GMMINNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEALQPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|160884684|ref|ZP_02065687.1| hypothetical protein BACOVA_02673 [Bacteroides ovatus ATCC 8483] gi|237717114|ref|ZP_04547595.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D1] gi|237721906|ref|ZP_04552387.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_2_4] gi|262405883|ref|ZP_06082433.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_22] gi|293372354|ref|ZP_06618738.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides ovatus SD CMC 3f] gi|294647843|ref|ZP_06725395.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides ovatus SD CC 2a] gi|294806240|ref|ZP_06765087.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides xylanisolvens SD CC 1b] gi|298479880|ref|ZP_06998079.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. D22] gi|299144937|ref|ZP_07038005.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 3_1_23] gi|156109719|gb|EDO11464.1| hypothetical protein BACOVA_02673 [Bacteroides ovatus ATCC 8483] gi|229443097|gb|EEO48888.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. D1] gi|229448775|gb|EEO54566.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_2_4] gi|262356758|gb|EEZ05848.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_22] gi|292632537|gb|EFF51131.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides ovatus SD CMC 3f] gi|292636751|gb|EFF55217.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides ovatus SD CC 2a] gi|294446496|gb|EFG15116.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides xylanisolvens SD CC 1b] gi|295085689|emb|CBK67212.1| succinate dehydrogenase subunit B [Bacteroides xylanisolvens XB1A] gi|298273689|gb|EFI15251.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. D22] gi|298515428|gb|EFI39309.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 3_1_23] Length = 251 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQ-AGPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISERKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIAKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNISISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|182412492|ref|YP_001817558.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Opitutus terrae PB90-1] gi|177839706|gb|ACB73958.1| ferredoxin [Opitutus terrae PB90-1] Length = 270 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 83/257 (32%), Gaps = 34/257 (13%) Query: 16 KIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 + W P +Y NP+ +D DL G + Sbjct: 15 RAWRQPSRNAPGKFVDYPATNLNPNMSFLEMLDVVNDDLVRKG--------------EEP 60 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG+C + I+G C M+ K V P ++K Sbjct: 61 IAFAHDCREGICGTCSLTINGKPHGPGEGIATCQTYMRSFKDGDIVVVEPFRAKAFPLVK 120 Query: 124 DLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F Q ++T + A + D C+ C C +C Sbjct: 121 DLVVDRSAFDKIQQVGGFISVRTGAAPDANAIPIPKADADLAMDAASCIQCGACVAACK- 179 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L A + L + E L + D C C+ +CPK Sbjct: 180 ---NASAMLFVAAKVSQLGLLPQGQPERDQRVLAMVAKMDELGFGSCTNQYECSAACPKL 236 Query: 241 LNPAKAIAKIKMMLLDR 257 ++ IA++ L Sbjct: 237 ISH-DFIARMNRDYLKA 252 >gi|30060811|gb|AAP19781.1| fumarate reductase [Haemophilus influenzae] Length = 163 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 1 GMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEA 60 Query: 149 KPAKELLQSHEDRQ------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ Q K C+ C C +CP + N +LGPA + Sbjct: 61 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAI 119 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A R+ +D+RD + +R+ L ++ C + C++ CPK Sbjct: 120 TMANRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKH 163 >gi|256425486|ref|YP_003126139.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chitinophaga pinensis DSM 2588] gi|256040394|gb|ACU63938.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Chitinophaga pinensis DSM 2588] Length = 254 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLL----YIKNKIDPTLTLRRSCREGI 84 +++R + ++Y V + L+ + N+ + CREGI Sbjct: 9 TLKVWRQK-NTNAQGHFESYQVPGVSSEMSFLEMFDVLNERLINEGKEPVAFDHDCREGI 67 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG+C M+I+G C M+ K + P V+KDL VD F Sbjct: 68 CGACSMHINGRAHGPWAGTTTCQLHMRAFKDGDTITVEPWRAGSFPVVKDLTVDRGAFDR 127 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T + + A +L + C+ C C +C NS L Sbjct: 128 IIEAGGYVSVNTGNAQDANNILVPKDKADAAFAAAACIGCGACVAACK----NSSAMLFV 183 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + L+ + D C C CPK ++ IA++ Sbjct: 184 SAKVSQLALLPQGQPEKKSRALNMIAQMDKEGFGSCTNTGACEAECPKEISLTN-IARLN 242 Query: 252 MMLLDRKI 259 + + Sbjct: 243 REYIAAGL 250 >gi|282879083|ref|ZP_06287843.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella buccalis ATCC 35310] gi|281298817|gb|EFA91226.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella buccalis ATCC 35310] Length = 252 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 74/248 (29%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + +R N DT+ + L+ L + ++ CREGI Sbjct: 8 TIKFWRQNGPKD-KGHFDTHEMKNIPDDTSFLEMLDILNEELIEDGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+G C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGVPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRNAFD 126 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + +D + C+ C C +C N L Sbjct: 127 KIIAAGGYNTIRTGQAQDANSILIPKDKADEAMDCASCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C +C CPK + A IA++ Sbjct: 183 VSSKVSQLALLPQGRPEAAKRAKAMVLKMDELGFGNCTNTRSCEAVCPKNESIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREYITAK 249 >gi|300727528|ref|ZP_07060919.1| fumarate reductase, iron-sulfur protein [Prevotella bryantii B14] gi|299775231|gb|EFI71832.1| fumarate reductase, iron-sulfur protein [Prevotella bryantii B14] Length = 252 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 83/249 (33%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + +R N DT+ + L+ L + ++ + CREGI Sbjct: 8 TIKYWRQN-GPTAQGHFDTHEMKDIPDDTSFLEMLDILNEELIEAGEEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD S F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRSAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++T + A LL S E + C+ C C +C N L Sbjct: 127 KIIAAGGYNTIRTGQAQDANALLISKEAADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + + + C C CPK + A IA++ Sbjct: 183 LSSKVSQLALLPQGRPEAAKRAKNMIAKMEELGFGNCTNTRACEAVCPKNESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREYISAKL 250 >gi|227497238|ref|ZP_03927478.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces urogenitalis DSM 15434] gi|226833286|gb|EEH65669.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces urogenitalis DSM 15434] Length = 257 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 81/249 (32%), Gaps = 28/249 (11%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + +I+R + + Y + L+ L + ++ + CREG Sbjct: 3 IKLKIWRQK-NQNTEGHFEEYSMSGIEEHMSFLEVLDLLNEQLFQEGKEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------------AIAVYPLP--HMSVIKDLVVD 128 ICG CG+ I+G + I + P ++KDLVVD Sbjct: 62 ICGQCGVVINGQAHGPIRSTTCQLHMRHLAEDPSFKDGDTITIEPWRSAGFPILKDLVVD 121 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S ++ + T + A + E C+ C C +CP N+ Sbjct: 122 RSALDRIVQAGGYISVNTGAAPEAHSVPVQKEKADAAFEAAACIGCGACVAACP----NA 177 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + L + E + L D C I C CPK + P + Sbjct: 178 SAMLFTGAKISHLGLLPQGQPERLSRVVSMLNQHDAEGFGGCTNIGECAAVCPKSV-PLE 236 Query: 246 AIAKIKMML 254 I+++ L Sbjct: 237 VISRLNRDL 245 >gi|225181636|ref|ZP_03735076.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dethiobacter alkaliphilus AHT 1] gi|225167617|gb|EEG76428.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dethiobacter alkaliphilus AHT 1] Length = 221 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%) Query: 27 LKEYRIYRWNPDNKGNPCMDT-YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +K RI ++ P+ K + T Y V ++ G VL L YI ++D +L R CR C Sbjct: 1 MKTIRINQYVPERKDL--VQTEYQVP-NSPGATVLQALQYIYEELDGSLAFRYGCRYNHC 57 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G CG+ +DG LAC + + + PL + +++ LVVD S + + + + + + Sbjct: 58 GLCGVMVDGKPRLACKVKLDSVSE---ISPLTGLPLLRSLVVDRSGYMKKLQDLALYPQG 114 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + +P L ++ L +C+ C CC +SC + + + P + ++ + +D Sbjct: 115 GAVEP----LGELQEDSLHKNLMKCLECLCCVSSCSQHTEGDNSSVDPYVFVKLAQLHLD 170 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RDE + + +C C+ CP G+ KAI +K Sbjct: 171 PRDETDRQAQARAN---GIDKCADCGKCS--CPNGIPIKKAILSLK 211 >gi|257425200|ref|ZP_05601626.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257272176|gb|EEV04308.1| succinate dehydrogenase iron-sulphur protein subunit [Staphylococcus aureus subsp. aureus 55/2053] Length = 194 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 3/177 (1%) Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +C E +CG+C M I+G +C + ++ I + P+ VI+DL VD S + + Sbjct: 2 NCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDNLKR 61 Query: 139 IEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W+ + E RQ L +C+ C C CP+ +++++G + Sbjct: 62 MKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNV-TENNKFVGAQAIS 120 Query: 198 QAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Q + + ERL+ L L +C NC +CPKG+ +IA + Sbjct: 121 QVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRE 177 >gi|86159354|ref|YP_466139.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85775865|gb|ABC82702.1| succinate dehydrogenase subunit B [Anaeromyxobacter dehalogenans 2CP-C] Length = 269 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 73/256 (28%), Gaps = 34/256 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + Y P + +D DL G + Sbjct: 17 VWRQAGPNEPGRFETYDAKGITPHHSFLEMLDVVNEDLIKAGK--------------EPI 62 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG+C ++G C M+ K A+Y P +IKD Sbjct: 63 VFDHDCREGICGACSAVVNGVPHGGYKRTTLCQLHMRKFKDGDAIYLEPWRARAFPIIKD 122 Query: 125 LVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L+VD ++ T EC+ C C +CP Sbjct: 123 LMVDRGALDRLIQAAGWTSAHTGGVPDGNSTPIPKRSADYAMDAAECIGCGACVAACP-- 180 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N L + L + E + C C +CPKG+ Sbjct: 181 --NGAAMLFAGAKVSQLNELPQGQVEAPERVAAMVQAMAENGFGNCSNHYECQAACPKGI 238 Query: 242 NPAKAIAKIKMMLLDR 257 + K IA++ Sbjct: 239 D-VKFIARLNREFRKA 253 >gi|218258333|ref|ZP_03474735.1| hypothetical protein PRABACTJOHN_00390 [Parabacteroides johnsonii DSM 18315] gi|218225525|gb|EEC98175.1| hypothetical protein PRABACTJOHN_00390 [Parabacteroides johnsonii DSM 18315] Length = 251 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRR 78 + +++R +TY +D N L+ L + + + Sbjct: 2 DKDIKVTLKVWRQKGPKD-KGQFETYQIDKINQSVSFLEMLDILNERLVSEGKEPIVFDH 60 Query: 79 SCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVD 128 CREGICG C + ++G C M+ + P VI+DL+VD Sbjct: 61 DCREGICGMCSLYVNGHPHGPATGATTCQLYMRRFNDGETITIEPWRSAGFPVIRDLMVD 120 Query: 129 MSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + ++ + T A + +D C+ C C+ +C N Sbjct: 121 RYAYDKIIQAGGFTSVNTGGVPDANAIPIPKKDADLAMDAAACIGCGACAAACK----NG 176 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + D C C CPK ++ + Sbjct: 177 SAMLFVSAKVSQLALLPQGKVEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNISVSN 236 Query: 246 AIAKIKMMLLDRKI 259 IA++ + K+ Sbjct: 237 -IARLNREFISAKL 249 >gi|229495563|ref|ZP_04389296.1| fumarate reductase, iron-sulfur protein [Porphyromonas endodontalis ATCC 35406] gi|229317546|gb|EEN83446.1| fumarate reductase, iron-sulfur protein [Porphyromonas endodontalis ATCC 35406] Length = 251 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R + +TY + + L+ L + ++ + CREG Sbjct: 7 ITVRVWRQK-GPREKGRFETYSLKEVSQSASFLEMLDLLNEQLVAEGKEPVVYDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C + I+G C M+ + P +I+DL+VD S + Sbjct: 66 ICGMCSLYINGHPHGPDDSITTCQLHMRRFNDGDTITIEPWRSAGFPIIRDLMVDRSAYD 125 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T A + + C+ C C+ +C N L Sbjct: 126 KIIQAGGFVSVNTGGVPDANAIAIPKAKADEAMDAAACIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK ++ IA++ Sbjct: 182 LSAKVSQLALLPQGRPEAARRAKAMIAKMDELGFGNCTNTRACEMECPKNISI-SHIARL 240 Query: 251 KMMLLDRK 258 + K Sbjct: 241 NREFIKAK 248 >gi|284046701|ref|YP_003397041.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Conexibacter woesei DSM 14684] gi|283950922|gb|ADB53666.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Conexibacter woesei DSM 14684] Length = 256 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 78/257 (30%), Gaps = 34/257 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P E ++ R + + +D L G L Sbjct: 7 VWRQDYPGAEGRFEKIRAENIDAEASFLEMLDQVNERLIGEGRRAL-------------- 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT-----LACVKDMKDIKGAIAVYPLPH----MSVIKDL 125 CREGICG+C + IDG C M+D + + P V++DL Sbjct: 53 AFDSDCREGICGACSLTIDGLPHGPQQVTTCQTYMRDFEDGQTIRVEPFRSNSFPVLRDL 112 Query: 126 VVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V D S S T P + S E +Q C+ C C +CP Sbjct: 113 VTDRSALDRIIESGGYVSTTTGPQPDPNSMPISPETQQHAMDAAICIGCGACVAACP--- 169 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLN 242 N L + L + E + D C C+ +CP+ ++ Sbjct: 170 -NGAAMLFTGAKVTHLNLLPQGQAERGERARAMVRQMDEEGFGGCTNFGECSLACPQEIS 228 Query: 243 PAKAIAKIKMMLLDRKI 259 I + R + Sbjct: 229 I-DVIGMLNREY-RRAV 243 >gi|301167420|emb|CBW27002.1| fumarate reductase iron-sulfur protein [Bacteriovorax marinus SJ] Length = 255 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 89/259 (34%), Gaps = 34/259 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + + +Y I +PD +D L G Sbjct: 12 KIWRQKNNKDKGEIVDYTIEGVSPDASFLEMLDILNEKLIAEGT--------------DP 57 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG C + I+G C M+ K + P V+K Sbjct: 58 VAFDHDCREGICGMCSLMINGQAHGPEAETTTCQLHMRKFKNGETIVVEPFRARAFPVLK 117 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL++D + F S + T + + A +L E+ + C+ C C SC Sbjct: 118 DLMIDRTAFDDIIASGGFVNVNTGNAQDANAILVPKENAELAMDAAACIGCGACVASCK- 176 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + + + D C C SCPKG Sbjct: 177 ---NASAMLFVSAKVSQLSLLPQGQLEAEERVKNMVTKMDELGFGNCTNEAECEASCPKG 233 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + IA++ L + Sbjct: 234 ISISN-IARMNRDFLSAAV 251 >gi|298345407|ref|YP_003718094.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus curtisii ATCC 43063] gi|304390962|ref|ZP_07372914.1| fumarate reductase subunit B [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235468|gb|ADI66600.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Mobiluncus curtisii ATCC 43063] gi|304325845|gb|EFL93091.1| fumarate reductase subunit B [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 249 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 83/245 (33%), Gaps = 24/245 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R + Y++ + L+ L + ++ + + CREG Sbjct: 3 ITLRVWRQK-GPSDKGALHEYHLTDISEDASFLEMLDILNEQLFAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 ICG CG+ I+G C M+ K + P +++DLVV + Sbjct: 62 ICGMCGIVINGVPHGPHKNRTTTCQLHMRTFKDGDTITVEPYRSRAFPILRDLVVSRAAL 121 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T S A + D + C+ C C +CP N L Sbjct: 122 DRIIQAGGYISVNTGSAPEAHSVPVPKPDADRAFEAAVCIGCGSCVAACP----NGSAML 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L + E + L D C I C +CPK + P I+ Sbjct: 178 FTSAKVTHLGLLPQGKVENYERVVAMLNQHDAEGFGACQNIGECAAACPKQI-PMDCISF 236 Query: 250 IKMML 254 + L Sbjct: 237 LNRQL 241 >gi|160891689|ref|ZP_02072692.1| hypothetical protein BACUNI_04144 [Bacteroides uniformis ATCC 8492] gi|270295213|ref|ZP_06201414.1| conserved hypothetical protein [Bacteroides sp. D20] gi|156859096|gb|EDO52527.1| hypothetical protein BACUNI_04144 [Bacteroides uniformis ATCC 8492] gi|270274460|gb|EFA20321.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 251 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T +P+ A +L + C+ C C +C N L Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAMDAASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L D C C CPK ++ + IA++ Sbjct: 183 SAKVSQLNLLPQGKPEALRRAKAMLSKMDELGFGNCTNTRACEAECPKNVSISN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 RDFIIAKL 249 >gi|154489887|ref|ZP_02030148.1| hypothetical protein PARMER_00116 [Parabacteroides merdae ATCC 43184] gi|154089329|gb|EDN88373.1| hypothetical protein PARMER_00116 [Parabacteroides merdae ATCC 43184] Length = 251 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRR 78 + +++R +TY +D N L+ L + + + Sbjct: 2 DKDIKVTLKVWRQKGPKD-KGQFETYQIDKINQSVSFLEMLDILNERLVSEGKEPIVFDH 60 Query: 79 SCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVD 128 CREGICG C + ++G C M+ + P VI+DL+VD Sbjct: 61 DCREGICGMCSLYVNGHPHGPATGATTCQLYMRRFNDGETITIEPWRSAGFPVIRDLMVD 120 Query: 129 MSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + ++ + T A + S D C+ C C+ +C N Sbjct: 121 RYAYDKIIQAGGFVSVNTGGVPDANAIPISKADADLAMDAAACIGCGACAAACK----NG 176 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + D C C CPK ++ + Sbjct: 177 SAMLFVSAKVSQLALLPQGKVEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNISVSN 236 Query: 246 AIAKIKMMLLDRKI 259 IA++ + K+ Sbjct: 237 -IARLNREFISAKL 249 >gi|51245989|ref|YP_065873.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Desulfotalea psychrophila LSv54] gi|50877026|emb|CAG36866.1| probable succinate dehydrogenase, iron-sulfur protein [Desulfotalea psychrophila LSv54] Length = 250 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 83/248 (33%), Gaps = 23/248 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREG 83 +I+R +++ ++Y + + L+ L + + + CREG Sbjct: 5 ITVKIWRQQ-NSESVGDFESYDLQGIDTDMSFLEMLDVLNEDLTKKAIEPVAFDHDCREG 63 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG CG ++G C M+ + + P ++ KDL+VD S Sbjct: 64 ICGMCGAVVNGIAHGPEKKTTLCQLHMRHFESGDTIVIEPFRSKVFTIKKDLIVDRSALD 123 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T + + + C+ C C SCP N L Sbjct: 124 RIMQAGGFVSVNTGGTPDGNAIPIASVKAELAMDAAACIGCGACVASCP----NGAAMLF 179 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L E + L L D C C CPKG++ + IA++ Sbjct: 180 TSAKVSQLCLLPQGEPERKRRALSMLEAMDKEGFGNCTNARECEMQCPKGIDI-RNIARL 238 Query: 251 KMMLLDRK 258 + Sbjct: 239 NHEYIRAA 246 >gi|56675833|emb|CAB77644.2| succinate dehydrogenase Fe/S subunit [Candida albicans] Length = 133 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 74/130 (56%), Positives = 88/130 (67%), Gaps = 2/130 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 LK+++IYRWNPD P M TY VDL+ CGPMVLD LL IKN+ D TLTLRRSC Sbjct: 3 EKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRRSC 62 Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 REG CGSC MNI G NTLAC + +D + VYPLP M V+ DLV D++HFY ++SI Sbjct: 63 REGXCGSCAMNIGGRNTLACLCRIDQDESXDLKVYPLPXMFVVXDLVPDLTHFYKXYKSI 122 Query: 140 EPWLKTVSPK 149 EP+L S Sbjct: 123 EPYLPRESNP 132 >gi|42521674|ref|NP_967054.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bdellovibrio bacteriovorus HD100] gi|39574204|emb|CAE77708.1| succinate dehydrogenase subunit B [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 85/259 (32%), Gaps = 34/259 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W P + EY+ + D +D +L G D Sbjct: 11 KVWRQKGPKDQGAFAEYQAKNVSEDASFLEMLDAVNEELVAKG--------------DEP 56 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGA--IAVYPLPH--MSVIK 123 + CREGICG+CG IDG C M++ + + P +IK Sbjct: 57 IAFDHDCREGICGTCGFVIDGEAHGPMKSTTVCQLHMRNFNDGAVLTIEPFRAKAFPMIK 116 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S S T + A +L D + C+ C C +C Sbjct: 117 DLMVDRSALDRIISSGGYISANTGNAVDANAILVPKADADEAMSSATCIGCGACVAACK- 175 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L + E + R+ D C T C +CPK Sbjct: 176 ---NASAALFTSAKISHMALLPQGQVERKERAMRMVGAMDAEGFGACTTTGACEAACPKE 232 Query: 241 LNPAKAIAKIKMMLLDRKI 259 + I+++ + Sbjct: 233 IQLTN-ISRMNREFFVANV 250 >gi|294675065|ref|YP_003575681.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Prevotella ruminicola 23] gi|294472950|gb|ADE82339.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Prevotella ruminicola 23] Length = 252 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 79/249 (31%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + +R N DT+ + L+ L + ++ CREGI Sbjct: 8 TIKFWRQNGPKDQ-GHFDTHEMHDIPDDTSFLEMLDILNEELINEGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGLTERGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRNAFD 126 Query: 134 SQHRSIEPWLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + A +L ED + C+ C C +C N L Sbjct: 127 KIIQAGGYTTIRTGQAQDANAILIPKEDADEAMDCASCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + + D C C CPK IA++ Sbjct: 183 VSSKVSQLALLPQGKVEAARRVKNMIAKMDELGFGNCTNTRACEAVCPKN-ETIANIARL 241 Query: 251 KMMLLDRKI 259 ++ K+ Sbjct: 242 NREMIKAKM 250 >gi|218886228|ref|YP_002435549.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757182|gb|ACL08081.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 297 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 100/271 (36%), Gaps = 44/271 (16%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 +P R+ R P N D Y + + VLD L I+ + DPTL R S Sbjct: 28 SPPQRARTLTVRVQRSGPG-GANARFDDYRLSV-RPEDSVLDVLDRIRVETDPTLVYRHS 85 Query: 80 CREGICGSCGMNIDGTNTLACVKDM-KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C CG+C M I+G LAC+ M + + PL + V+ DL+VDM ++ Sbjct: 86 CHHSSCGTCAMRINGRERLACITRMLALGTDVVTLEPLRSLPVLGDLMVDMRPMFAHIE- 144 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---------- 188 W + A + R L C+ C C ++CP D Sbjct: 145 -PDWGYVRPVEKASTGVPHGVAR--YTRLENCIECGACMSACPVSNGTDDMPPATAQGSQ 201 Query: 189 --------------------------RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 ++GPA L R L E + E L + P Sbjct: 202 HSAHQPTRQPARQPAQDSDESAPADAMFIGPAPLAALNRELAR-HPERREELLHIGKGPH 260 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C M C+++CP G+ PAK I I+MM Sbjct: 261 GERHCRRHMACSRACPSGVYPAKDIMDIRMM 291 >gi|228469441|ref|ZP_04054449.1| fumarate reductase, iron-sulfur protein [Porphyromonas uenonis 60-3] gi|228309016|gb|EEK17659.1| fumarate reductase, iron-sulfur protein [Porphyromonas uenonis 60-3] Length = 251 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 81/249 (32%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +++R + +TY + L+ + + ++ + CREG Sbjct: 7 INVKVWRQR-GPREKGHFETYALKDVPQSASFLEMIDILNEQLIAEDKEPVIYDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C M ++G C M+ K + P +I+DL+VD S + Sbjct: 66 ICGMCSMYVNGHPHGPISAITTCQLHMRTFKDGDTITVEPWRSAGFPIIRDLMVDRSAYD 125 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T A + + C+ C C+ +C N L Sbjct: 126 KIIQAGGYVSVNTGGVPDANSIPIPKHKADEAMDAASCIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK ++ IA++ Sbjct: 182 VSAKVSQLALLPQGRAEAHKRAKAMIAKMDELGFGNCTNTRACEMECPKSVSI-SHIARL 240 Query: 251 KMMLLDRKI 259 L K+ Sbjct: 241 NRQFLAAKL 249 >gi|148265283|ref|YP_001231989.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter uraniireducens Rf4] gi|146398783|gb|ABQ27416.1| succinate dehydrogenase subunit B [Geobacter uraniireducens Rf4] Length = 251 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 85/253 (33%), Gaps = 25/253 (9%) Query: 24 EKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRR 78 + ++R P + G +TY L+ + + + + Sbjct: 5 KTMTLTLNVWRQKGPKDPGK--FETYTAKNITEHHSFLEMIDVVNEDLIKSGKEPIVFDH 62 Query: 79 SCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 CREGICG C ++G C M+ K ++ P +IKDLVVD Sbjct: 63 DCREGICGMCSQVVNGVPHGGQERTTVCQLHMRKFKDGDTIFIEPWRATAFPIIKDLVVD 122 Query: 129 MSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S + + ++ T +L + EC+ C C+ +CP NS Sbjct: 123 RSAYDTIIQAGGYTSCHTGGVPDGNAVLIPKPEADYAMDAAECIGCGACAAACP----NS 178 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + C C +CPKG+N K Sbjct: 179 SAMLFTSAKVAQMAALPQGKAEAGVRVKAMVEAMQECGFGNCSNHYECQAACPKGIN-VK 237 Query: 246 AIAKIKMMLLDRK 258 IAK+ L + Sbjct: 238 FIAKLNREYLKAQ 250 >gi|301165815|emb|CBW25388.1| putative succinate dehydrogenase iron-sulfur protein [Bacteriovorax marinus SJ] Length = 248 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 93/249 (37%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +++I+R + + Y VD + L+ L + K+ D + CREG Sbjct: 3 VKFKIWRQS-NKDSKGGFVLYEVDNISEEMSFLEALDALNEKLARKGDSVVAFDHDCREG 61 Query: 84 ICGSCGMNIDGT------NTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG CG+ I+G NT C M+ K + P +IKDLVVD S F Sbjct: 62 ICGQCGVFINGRAHGPHSNTTTCQLHMRSFKDGETIVVEPWRAKAFPIIKDLVVDRSSFD 121 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S KT + A +L E + C+ C C +C + L Sbjct: 122 RIIQSGGFITAKTGTAAEANSILIGKEVADAAMDVAACIGCGACVATCKNSAAA----LF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E L + C +C CP+ ++ + IAK+ Sbjct: 178 TSAKISHLNSLPQGKPEANERTLKMAEQMELEDFGHCSFTGSCEVECPENISISN-IAKM 236 Query: 251 KMMLLDRKI 259 LL KI Sbjct: 237 NFDLLKAKI 245 >gi|149179151|ref|ZP_01857720.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Planctomyces maris DSM 8797] gi|148842011|gb|EDL56405.1| succinate dehydrogenase/fumarate reductase iron-sulfur [Planctomyces maris DSM 8797] Length = 253 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 R++R P Y + + L+ L + ++ + + CREGI Sbjct: 8 TLRVWRQ-PGADAVGQYVEYKLTGISTHMSFLEMLDVLNEQLHAKGEEMIAFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P V++DLVVD S F Sbjct: 67 CGMCSLMINGQAHGPDTGTTTCQLHMRRFKNGDTIVVEPWRAQAFPVVRDLVVDRSAFDR 126 Query: 135 QH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T + A + ++ C+ C C +C N+ L Sbjct: 127 IIEKGGYISVSTGNAPEANAIPVPAPVQETAMDAAACIGCGACVAACK----NASAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + + D C C+ +CP ++ + IA++ Sbjct: 183 SAKVSHLSTLPQGKPERDSRVQNMVAQMDLEGFGNCTNTEECSAACPAEISVSN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REYMRAKL 249 >gi|189218404|ref|YP_001939045.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methylacidiphilum infernorum V4] gi|161075813|gb|ABX56654.1| succinate dehydrogenase catalytic subunit [Methylacidiphilum infernorum V4] gi|189185262|gb|ACD82447.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Methylacidiphilum infernorum V4] Length = 254 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 92/264 (34%), Gaps = 39/264 (14%) Query: 16 KIWNAPTG---EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 KIW P G + Y + NPD +D +L+ L +K + Sbjct: 6 KIWRQPLGNNLQGAFAHYSLEAVNPDMSFLEMLD------------LLNDQLVLKGE--E 51 Query: 73 TLTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVI 122 + CREGICGSC + I+G C M+ K + P VI Sbjct: 52 PVAFDSDCREGICGSCSLMINGKPHGPGYGITTCQLYMRRFKDNEEIIVEPFRSRAFPVI 111 Query: 123 KDLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 KDLVVD S F ++ + A + H +K C+ C C +C Sbjct: 112 KDLVVDRSAFDRIMQAGGYISVSAGQAPEANSIPIPHPIAEKAFDAAHCIGCGACVAACK 171 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPK 239 N L + L + E + L +E D C C CPK Sbjct: 172 ----NGSASLFVGAKITHLSLLPQGQPERRRRVLQMVEQADKEGFGACSFTKACEAVCPK 227 Query: 240 GLNPAKAIAKIKMM----LLDRKI 259 ++ + I+++ +L RK+ Sbjct: 228 AIS-VEVISRMHREYLISVLQRKL 250 >gi|167752749|ref|ZP_02424876.1| hypothetical protein ALIPUT_01010 [Alistipes putredinis DSM 17216] gi|167659818|gb|EDS03948.1| hypothetical protein ALIPUT_01010 [Alistipes putredinis DSM 17216] Length = 247 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 88/247 (35%), Gaps = 23/247 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R D K +TY V+ + L+ L + N + + CREGI Sbjct: 4 TLKIWRQK-DAKAKGAFETYKVENISADTSFLEMLDILNNNLIHEGKEPVAFDHDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C ++IDG C M+ K + P VIKDLVVD S + Sbjct: 63 CGMCSLHIDGRAHGPGDGATTCQIYMRRFKDGATIVIEPWRSAAFPVIKDLVVDRSAYDK 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T + + A + D C+ C C+ +C N L Sbjct: 123 ILQAGGFISVRTNAVQDANNIPIPKADADVAMDAAACIGCGACAATCK----NGSAMLFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A + + L R E + D C C CPK ++ IA++ Sbjct: 179 AARVSSLAKLPQGRVEGARRAKAMVAKMDELGFGNCTNTGACQAECPKMISI-SHIARLN 237 Query: 252 MMLLDRK 258 L K Sbjct: 238 REFLSAK 244 >gi|146301070|ref|YP_001195661.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacterium johnsoniae UW101] gi|146155488|gb|ABQ06342.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Flavobacterium johnsoniae UW101] Length = 248 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 88/245 (35%), Gaps = 23/245 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGIC 85 +I+R D M Y +D + L+ L + K + + CREGIC Sbjct: 5 LKIWRQF-DTSSKGEMVDYELDGVSEHMSFLEMLDLLNESLIQKKERVIEFDHDCREGIC 63 Query: 86 GSCGMNIDGT------NTLACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQ 135 G CG+ I+G NT C M+ K +Y P V++DL +D S F + Sbjct: 64 GQCGVMINGRAHGPLKNTTTCQLHMRSFKDGETIYIEPFRAKAFPVLRDLKIDRSAFDAI 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 RS T A + S E + C+ C C SC N+ L Sbjct: 124 IRSGGFIGASTGQAPEANSIPISFETAEASFDAAACIGCGACVASCK----NASAALFVG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + + D C C CP+G++ +IAK+ + Sbjct: 180 AKITHLALLPQGKVEASKRAITMVKQMDAEGFGNCSDTRACEIECPQGISVL-SIAKMNL 238 Query: 253 MLLDR 257 + Sbjct: 239 EYMKA 243 >gi|304383734|ref|ZP_07366193.1| fumarate reductase subunit B [Prevotella marshii DSM 16973] gi|304335258|gb|EFM01529.1| fumarate reductase subunit B [Prevotella marshii DSM 16973] Length = 253 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R N K D++ + L+ L + ++ CREGI Sbjct: 10 TLKVWRQN-GPKAKGYFDSFEMKDIPGDTSFLEMLDILNEQLIEDNKEPFVFDHDCREGI 68 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K + P VIKD +VD F Sbjct: 69 CGMCSLYINGHPHGPATGATTCQLYMRRFKDGDVITVEPWRSAAFPVIKDCMVDRGAFDK 128 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T P+ A +L E+ + C+ CA C +C N L Sbjct: 129 IIQAGGYTSVRTGQPQDANAILIPKENADEAMDCASCIGCAACVAACK----NGSAMLFV 184 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L R E + + C C CPK IA++ Sbjct: 185 SSKVSQLALLPQGRPEAAKRAKSMVMRMEELGFGNCTNTRACEAECPKN-ETIANIARLN 243 Query: 252 MMLLDRKI 259 + K+ Sbjct: 244 REFIVAKL 251 >gi|119691242|gb|ABL95518.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691244|gb|ABL95519.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691246|gb|ABL95520.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691248|gb|ABL95521.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691250|gb|ABL95522.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691252|gb|ABL95523.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691404|gb|ABL95599.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] Length = 169 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 +K++P L+ R SCR ICGSCGM ++ LAC ++D G + + PL + + +DLVV Sbjct: 1 DKLEPELSYRWSCRMAICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVV 60 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------RQKIDGLYECVMCAC 175 D+SHF +I+P++ ++ +K C+ C Sbjct: 61 DLSHFIESLEAIKPYIIGNKMPELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGL 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C +CP + N ++GPA L A+R+ +D+RD + ER+ + ++ Sbjct: 121 CYAACPQFGLNP-EFVGPAALTLAHRYNLDNRDHGKAERMKIMNGENGVW 169 >gi|315655814|ref|ZP_07908712.1| fumarate reductase subunit B [Mobiluncus curtisii ATCC 51333] gi|315656261|ref|ZP_07909152.1| fumarate reductase subunit B [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315489878|gb|EFU79505.1| fumarate reductase subunit B [Mobiluncus curtisii ATCC 51333] gi|315493263|gb|EFU82863.1| fumarate reductase subunit B [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 249 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 83/245 (33%), Gaps = 24/245 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 R++R + Y++ + L+ L + ++ + + CREG Sbjct: 3 ITLRVWRQK-GPSDKGALHEYHLTDISEDASFLEMLDILNEQLFAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 ICG CG+ I+G C M+ K + P +++DLVV + Sbjct: 62 ICGMCGIVINGVPHGPHKNRTTTCQLHMRTFKDGDTITVEPYRSRAFPILRDLVVSRAAL 121 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + T S A + D + C+ C C +CP N L Sbjct: 122 DRIIQAGGYISVNTGSAPEAHSVPVPKPDADRAFEAAVCIGCGSCVAACP----NGSAML 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L + E + L D C I C +CPK + P I+ Sbjct: 178 FTSAKVTHLGLLPQGKVENYERVVAMLNQHDAEGFGACQNIGECAAACPKQI-PLDCISF 236 Query: 250 IKMML 254 + L Sbjct: 237 LNRQL 241 >gi|20093572|ref|NP_613419.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Methanopyrus kandleri AV19] gi|19886425|gb|AAM01349.1| Succinate dehydrogenase/fumarate reductase Fe-S protein [Methanopyrus kandleri AV19] Length = 492 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 15/206 (7%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV 113 G +LD L +IK P L SCR CG+C + ++G LAC ++ + V Sbjct: 27 REGMTLLDALRWIKEHEIPDLEFEFSCRNAQCGTCAVLVNGKARLACEYRLEP-GQEVTV 85 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 PL H+ V+KDL VD S S+ R + P E ++K+ L C+ C Sbjct: 86 GPLRHLPVVKDLAVDWSAVTSRLRPLSPKSHRE-----WFRRMEPEKQRKLYELRSCIEC 140 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 CC CP S R GP +L + E + ++ E +Y C T C Sbjct: 141 LCCVAECPVIKAGSARNPGPIVLRKVA--------EEAEKWDESPEIDDSVYACTTCHTC 192 Query: 234 TQSCPKGLN-PAKAIAKIKMMLLDRK 258 + CPK + PAKA+ ++ L + Sbjct: 193 AEVCPKDIEIPAKAVETVRARLYEEG 218 >gi|215447626|ref|ZP_03434378.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis T85] Length = 125 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 53/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + +R+I+P+L T P +E +QS DR + D +C++CACC+TSCP +W Y G Sbjct: 1 FDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFG 59 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA ++ A+R++ DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K Sbjct: 60 PAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKR 119 Query: 253 MLL 255 L+ Sbjct: 120 ALM 122 >gi|119691256|gb|ABL95525.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691258|gb|ABL95526.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691260|gb|ABL95527.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691262|gb|ABL95528.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691264|gb|ABL95529.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691266|gb|ABL95530.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691268|gb|ABL95531.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691270|gb|ABL95532.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691272|gb|ABL95533.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691274|gb|ABL95534.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691276|gb|ABL95535.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691278|gb|ABL95536.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691280|gb|ABL95537.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691282|gb|ABL95538.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691284|gb|ABL95539.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691286|gb|ABL95540.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691288|gb|ABL95541.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691290|gb|ABL95542.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691292|gb|ABL95543.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691294|gb|ABL95544.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691296|gb|ABL95545.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691298|gb|ABL95546.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691300|gb|ABL95547.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691302|gb|ABL95548.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691304|gb|ABL95549.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691306|gb|ABL95550.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691308|gb|ABL95551.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691310|gb|ABL95552.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691312|gb|ABL95553.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691314|gb|ABL95554.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691316|gb|ABL95555.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691318|gb|ABL95556.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691320|gb|ABL95557.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691322|gb|ABL95558.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691324|gb|ABL95559.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691326|gb|ABL95560.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691328|gb|ABL95561.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691330|gb|ABL95562.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691332|gb|ABL95563.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691334|gb|ABL95564.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691336|gb|ABL95565.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691338|gb|ABL95566.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691340|gb|ABL95567.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691342|gb|ABL95568.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691344|gb|ABL95569.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691346|gb|ABL95570.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691348|gb|ABL95571.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691350|gb|ABL95572.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691352|gb|ABL95573.1| fumarate reductase [Aggregatibacter actinomycetemcomitans HK1651] gi|119691354|gb|ABL95574.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691356|gb|ABL95575.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691358|gb|ABL95576.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691360|gb|ABL95577.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691362|gb|ABL95578.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691364|gb|ABL95579.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691366|gb|ABL95580.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691368|gb|ABL95581.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691370|gb|ABL95582.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691372|gb|ABL95583.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691374|gb|ABL95584.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691376|gb|ABL95585.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691378|gb|ABL95586.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691380|gb|ABL95587.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691382|gb|ABL95588.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691384|gb|ABL95589.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691386|gb|ABL95590.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691388|gb|ABL95591.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691390|gb|ABL95592.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691392|gb|ABL95593.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691394|gb|ABL95594.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691396|gb|ABL95595.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691398|gb|ABL95596.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691400|gb|ABL95597.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] gi|119691402|gb|ABL95598.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] Length = 169 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 +K++P L+ R SCR ICGSCGM ++ LAC ++D G + + PL + + +DLVV Sbjct: 1 DKLEPELSYRWSCRMAICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVV 60 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------RQKIDGLYECVMCAC 175 D+SHF +I+P++ ++ +K C+ C Sbjct: 61 DLSHFIESLEAIKPYIIGNKMPELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGL 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C +CP + N ++GPA L A+R+ +D+RD Q ER+ + ++ Sbjct: 121 CYAACPQFGLNP-EFVGPAALTLAHRYNLDNRDHGQAERMKIMNGENGVW 169 >gi|224373146|ref|YP_002607518.1| fumarate reductase, iron-sulfur subunit [Nautilia profundicola AmH] gi|223588649|gb|ACM92385.1| fumarate reductase, iron-sulfur subunit [Nautilia profundicola AmH] Length = 238 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 9/224 (4%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 + I R+ G + + D +L+ L KNK + ++T R CR ICG+C Sbjct: 2 KVNIKRY---LNGKVWFENFEFDFK-EDETILELLDRAKNK-NRSITYRSFCRSSICGTC 56 Query: 89 GMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 + ++ LAC +KD I + P+ +IKDLVVD S+ + + W Sbjct: 57 AVKVNDKTVLACKTKVKDFIEHDEIIIEPVDRSKIIKDLVVDHSYIEKAIKQNKLWF-ED 115 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E LQ+ ++ QK + +C+MC C C + + + GP I + +R++ DS Sbjct: 116 EIRNDMENLQTPQELQKYEKQTDCIMCMACYFECEALDYTP-EFAGPFIFTKYFRFVFDS 174 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 RD+ ++ NL LY C C CPKGL A I + Sbjct: 175 RDKSDTQQRINLAKENGLYNCINCQKCVMVCPKGLASAFDIQML 218 >gi|325859732|ref|ZP_08172862.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella denticola CRIS 18C-A] gi|327312889|ref|YP_004328326.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella denticola F0289] gi|325482658|gb|EGC85661.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella denticola CRIS 18C-A] gi|326945490|gb|AEA21375.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella denticola F0289] Length = 252 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 81/248 (32%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ D CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIASGDEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD S F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDIITVEPWRSAGFPVIKDCMVDRSAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ ++T + A +L E+ + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILIPKENADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAAKRAKAMVAKMDEVGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|307827248|gb|ADN94649.1| fumarate reductase iron-sulfur subunit [Aggregatibacter actinomycetemcomitans] Length = 168 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 13/169 (7%) Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 K++P L+ R SCR ICGSCGM ++ LAC ++D G + + PL + + +DLVVD Sbjct: 1 KLEPELSYRWSCRMAICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVVD 60 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------RQKIDGLYECVMCACC 176 +SHF +I+P++ + ++ +K C+ C C Sbjct: 61 LSHFIESLEAIKPYIIGNKMQELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGLC 120 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +CP + N ++GPA L A+R+ +D+RD + ER+ + ++ Sbjct: 121 YAACPQFGLNP-EFVGPAALTLAHRYNLDNRDHGKAERMKIMNGENGVW 168 >gi|119691254|gb|ABL95524.1| fumarate reductase [Aggregatibacter actinomycetemcomitans] Length = 169 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%) Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 +K++P L+ R SCR ICGSCGM ++ LAC ++D G + + PL + + +DLVV Sbjct: 1 DKLEPELSYRWSCRMAICGSCGMMVNNIPKLACKTFLRDYSGHMRIEPLANFPIERDLVV 60 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------RQKIDGLYECVMCAC 175 D+SHF +I+P++ + ++ +K C+ C Sbjct: 61 DLSHFIESLEAIKPYIIDNKMQELDGKPHPSKELAKSRTKQTPAQLEKYRQFSMCINCGL 120 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C +CP + N ++GPA L A+R+ +D+RD + ER+ + ++ Sbjct: 121 CYAACPQFGLNP-EFVGPAALTLAHRYNLDNRDHGKAERMKIMNGENGVW 169 >gi|289805814|ref|ZP_06536443.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 122 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 91/122 (74%), Gaps = 1/122 (0%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYEC 170 + PLP + VI+DLVVDM FY+Q+ I+P+L PA+E LQ E R+K+DGLYEC Sbjct: 1 MIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYEC 60 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 ++CACCSTSCPS+WWN D+++GPA LL AYR+LIDSRD RL+ + D F ++RCH+I Sbjct: 61 ILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSI 120 Query: 231 MN 232 MN Sbjct: 121 MN 122 >gi|325268363|ref|ZP_08134996.1| fumarate reductase subunit B [Prevotella multiformis DSM 16608] gi|324989505|gb|EGC21455.1| fumarate reductase subunit B [Prevotella multiformis DSM 16608] Length = 252 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 81/248 (32%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ D CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIASGDEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD S F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDIITVEPWRSAGFPVIKDCMVDRSAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ ++T + A +L E+ + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILIPKENADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAARRAKAMVAKMDEVGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|313886533|ref|ZP_07820249.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Porphyromonas asaccharolytica PR426713P-I] gi|332300342|ref|YP_004442263.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|312924079|gb|EFR34872.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Porphyromonas asaccharolytica PR426713P-I] gi|332177405|gb|AEE13095.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 251 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 82/249 (32%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + +++R + +TY + L+ + + ++ + CREG Sbjct: 7 IKVKVWRQR-GPREKGHFETYALKDVPQSASFLEMIDILNEQLIAEDKEPVIYDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C M IDG C M+ K + P +I+DL+VD S + Sbjct: 66 ICGMCSMYIDGHPHGPVSAITTCQLHMRTFKDGDTITVEPWRSAGFPIIRDLMVDRSAYD 125 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T A + + C+ C C+ +C N L Sbjct: 126 KIIQAGGYVSVNTGGVPDANSIPIPKHKADEAMDAASCIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK ++ IA++ Sbjct: 182 VSAKVSQLALLPQGRAEAHKRAKAMIAKMDELGFGNCTNTRACEMECPKSVSI-SHIARL 240 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 241 NRQFIGAKL 249 >gi|149204396|ref|ZP_01881363.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Roseovarius sp. TM1035] gi|149142281|gb|EDM30328.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Roseovarius sp. TM1035] Length = 179 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%) Query: 90 MNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 M ++G C + + + + PL ++ VIKDL DM F+ + + E Sbjct: 1 MMVNGVPRWTCRTHVSRVASGGQLDIAPLRNLPVIKDLATDMDPFFDKWVAAEARHHPTR 60 Query: 148 PKPAKELLQSHE--DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + + +R + + EC+ C C +C + N D YLGPA L +A+ L D Sbjct: 61 GRLEEFDPIKPDAPERAEANLGIECINCGICYAACDTVAGNPD-YLGPAALQRAWTLLND 119 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 SRD + L + + CH++ +C Q CP GLNP +AIA +K + + Sbjct: 120 SRDADRPGILAAVSGKGGCHNCHSMGSCAQYCPNGLNPMRAIAGLKRETVKAAL 173 >gi|110638861|ref|YP_679070.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Cytophaga hutchinsonii ATCC 33406] gi|110281542|gb|ABG59728.1| succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) [Cytophaga hutchinsonii ATCC 33406] Length = 250 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 76/259 (29%), Gaps = 34/259 (13%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W L+ Y +PD +D L G Sbjct: 6 KVWRQKDAKSSGKLETYEAKDISPDMSFLEMIDVVNEGLIKKGV--------------EP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C M I+G C M+ K + P +IK Sbjct: 52 IAFDHDCREGICGACSMYINGHAHGPKKGITTCQLHMRSFKDGETITIEPWRAKAFPIIK 111 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPS 182 DLVVD S F ++ + E C+ C C +C Sbjct: 112 DLVVDRSAFDRIIQAGGYVSVNTGVTIDANAIAIPKEHADNAMDAATCIGCGACVAACK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + + L E + + C C+ CPK Sbjct: 171 ---NASATLFLSAKVSQLALLPQGHPERASRVEAMIDQMEAEGFGNCTNTEACSAECPKE 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 + + IA++ K+ Sbjct: 228 IG-QEHIARMNREFYAAKL 245 >gi|255348973|ref|ZP_05380980.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis 70] gi|255503512|ref|ZP_05381902.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis 70s] gi|255507190|ref|ZP_05382829.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis D(s)2923] gi|296435198|gb|ADH17376.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis E/150] gi|296438917|gb|ADH21070.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia trachomatis E/11023] Length = 232 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 4/191 (2%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHM 119 + I + + ++C +CGSC + ++G AC + + K I + PL Sbjct: 20 PVNIHGERVDPVVWEQACLGEVCGSCAVLVNGIPRQACTALIHEHMDAKREIKLAPLSKF 79 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++DL+VD S + I+ W+ S E++ + L C+ C CC+ + Sbjct: 80 PLVRDLIVDRSVMFKNLEEIQGWISAEKCGEGAGPKISQEEQTLMYSLSMCMTCGCCTEA 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP SD ++GPA + QA + ++ + RL L + C N + CPK Sbjct: 140 CPQVNEKSD-FMGPAAIAQARYFNAYPGEKRRESRLRALMGTRGIEGCGQAHNYVRVCPK 198 Query: 240 GLNPAKAIAKI 250 L ++I+ + Sbjct: 199 KLPLTESISAM 209 >gi|317504349|ref|ZP_07962335.1| fumarate reductase subunit B [Prevotella salivae DSM 15606] gi|315664540|gb|EFV04221.1| fumarate reductase subunit B [Prevotella salivae DSM 15606] Length = 252 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 76/249 (30%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ + CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIAGGEEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD S F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDIITVEPWRSAGFPVIKDCMVDRSAFD 126 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + +D + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILIAKDNADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAARRAKAMVLRMDELGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREFIKAKL 250 >gi|258647668|ref|ZP_05735137.1| fumarate reductase, iron-sulfur protein [Prevotella tannerae ATCC 51259] gi|260852495|gb|EEX72364.1| fumarate reductase, iron-sulfur protein [Prevotella tannerae ATCC 51259] Length = 252 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 84/249 (33%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + R ++ N D + L+ L + ++ CREGI Sbjct: 8 KLRYWKQNGPKDA-GHFDEREMKDIPDDTSFLEMLDILNEQLVEEGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTETGATTCQLYMRRFRDGETITVEPWRSAAFPVIKDCMVDRTAFD 126 Query: 134 S-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q ++T +P+ A +L +D + C+ C C +C N L Sbjct: 127 KIQSAGGYVSVRTGAPQDANSILIPKQDADEAMDCASCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + + L R E + D C C CPK + A IA++ Sbjct: 183 VSSRVSQFALLPQGRPEAARRAKLMVKKMDELGFGNCTNTRACEAVCPKNESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREFIKAKL 250 >gi|149918553|ref|ZP_01907042.1| Succinate dehydrogenase/fumarate reductase subunit B [Plesiocystis pacifica SIR-1] gi|149820629|gb|EDM80041.1| Succinate dehydrogenase/fumarate reductase subunit B [Plesiocystis pacifica SIR-1] Length = 252 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 84/254 (33%), Gaps = 22/254 (8%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPM--VLDGLL-YIKNKIDPTLTLRR 78 + E + +++R + + V + +LD L + N + Sbjct: 2 SDENMDIKLKVWRQK-GPTQAGYFEDHKVSANPHMSFLEMLDVLNEQLLNDGKEPVAFDH 60 Query: 79 SCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 CREGICG+C M IDG C M++ + P VIKDLVVD Sbjct: 61 DCREGICGACSMVIDGAPHGPRKGTTTCQLHMREYNDGDEIVIEPWRAKAFPVIKDLVVD 120 Query: 129 MSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 F Q + T S A + D + C+ C C +CP N+ Sbjct: 121 RRAFDRIQQAGGYVSVSTGSSPDANAIPIGKRDADEAFDYAACIGCGACVAACP----NA 176 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + + L + E + D C C SCPK ++ Sbjct: 177 SAMLFVSAKVAHLSLLPQGQVERVERVRKMVDAMDFEGFGGCTNHGECEASCPKTIS-VD 235 Query: 246 AIAKIKMMLLDRKI 259 AI + + + Sbjct: 236 AIGLLNREYMRAGL 249 >gi|86159060|ref|YP_465845.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85775571|gb|ABC82408.1| succinate dehydrogenase subunit B [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 80/246 (32%), Gaps = 23/246 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R D + + Y V + L+ L + + + + CREGIC Sbjct: 5 LEIWRQR-DPRADGRFVRYEVTDVSEHMSFLEMLDVLNQSLVRRGEMPVAFDSDCREGIC 63 Query: 86 GSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G+CG ++G N C M+ + P V++DLVVD Sbjct: 64 GTCGFLVNGEAHGPLRNATICQTHMRHFHDGDVLRLEPWRAAAFPVVRDLVVDRGALDRI 123 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++T A L D + C+ C C +CP N+ L Sbjct: 124 VAAGGYVSVRTGGAPDANALPVPKTDADRAMEAAACIGCGACVAACP----NASAALFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E E C +I C CP G+ + IA++ Sbjct: 180 AKITHLSLLPQGQPERPLRVRSMAEQARAEGFGHCTSIGECAAVCPAGIQL-EVIARMNR 238 Query: 253 MLLDRK 258 L Sbjct: 239 DFLRAA 244 >gi|302344823|ref|YP_003813176.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella melaninogenica ATCC 25845] gi|302150033|gb|ADK96295.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella melaninogenica ATCC 25845] Length = 252 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 75/248 (30%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ D CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIAAGDEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRTAFD 126 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + +D + C+ C C +C N L Sbjct: 127 KIIQAGGYTTIRTGQAQDANAILISKDNADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAAKRAKAMVAKMDEVGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|150009792|ref|YP_001304535.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Parabacteroides distasonis ATCC 8503] gi|255012916|ref|ZP_05285042.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_7] gi|256838457|ref|ZP_05543967.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Parabacteroides sp. D13] gi|262382889|ref|ZP_06076026.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_33B] gi|298374187|ref|ZP_06984145.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 3_1_19] gi|301312436|ref|ZP_07218352.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 20_3] gi|149938216|gb|ABR44913.1| fumarate reductase, iron-sulfur protein [Parabacteroides distasonis ATCC 8503] gi|256739376|gb|EEU52700.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Parabacteroides sp. D13] gi|262295767|gb|EEY83698.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 2_1_33B] gi|298268555|gb|EFI10210.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 3_1_19] gi|300829619|gb|EFK60273.1| fumarate reductase, iron-sulfur protein [Bacteroides sp. 20_3] Length = 251 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +++R K +TY ++ N L+ L + ++ + CREG Sbjct: 7 VTLKVWRQR-GPKEKGQFETYKIEKINQSVSFLEMLDILNEQLVNEGKEPIVFDHDCREG 65 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG C + ++G C M+ + P VI+DL+VD + Sbjct: 66 ICGMCSLYVNGHPHGPATGATTCQLYMRRFHDGETITIEPWRSAGFPVIRDLMVDRYAYD 125 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + T A + +D C+ C C+ +C N L Sbjct: 126 KIIQAGGFTSVNTGGVPDANAIPIPKKDADLAMDAAACIGCGACAAACK----NGSAMLF 181 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK ++ + IA++ Sbjct: 182 VSAKVSQLALLPQGKVEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNISVSN-IARL 240 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 241 NREFICAKL 249 >gi|288801775|ref|ZP_06407217.1| fumarate reductase, iron-sulfur protein [Prevotella melaninogenica D18] gi|288335817|gb|EFC74250.1| fumarate reductase, iron-sulfur protein [Prevotella melaninogenica D18] Length = 252 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 75/248 (30%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ D CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIAAGDEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRTAFD 126 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + +D + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILISKDNADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAAKRAKAMVAKMDEVGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|281422334|ref|ZP_06253333.1| fumarate reductase, iron-sulfur protein [Prevotella copri DSM 18205] gi|281403655|gb|EFB34335.1| fumarate reductase, iron-sulfur protein [Prevotella copri DSM 18205] Length = 252 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 78/235 (33%), Gaps = 23/235 (9%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGICGSCGMNIDGTNT- 97 DT+ + L+ L + ++ CREGICG C + I+GT Sbjct: 21 GHFDTHEMKNIPDDTSFLEMLDILNEELIESGQEPFVFDHDCREGICGMCSLYINGTPHG 80 Query: 98 ------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQHRSI-EPWLKTV 146 C M+ + P +IKD +VD S F ++ ++T Sbjct: 81 KTERGATTCQLYMRRFNDGDVITVEPWRSAGFPIIKDCMVDRSAFDKIIQAGGYTSIRTG 140 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A +L E+ + C+ C C +C N L + + L Sbjct: 141 QAQDANAILIPKENADEAMDCATCIGCGACVAACK----NGSAMLFVSSKVSQLALLPQG 196 Query: 207 RDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R E + D C C CPK + A IA++ L K+ Sbjct: 197 RVEAVARAKKMIARMDELGFGNCTNTRACEAVCPKNESIAN-IARLNREFLKAKL 250 >gi|197123127|ref|YP_002135078.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter sp. K] gi|220917918|ref|YP_002493222.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|196172976|gb|ACG73949.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter sp. K] gi|219955772|gb|ACL66156.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 285 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 79/246 (32%), Gaps = 23/246 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R D + Y V + L+ L + + + + CREGIC Sbjct: 5 LEIWRQR-DPRAEGRFVRYEVTDVSEHMSFLEMLDVLNQALVQRGEMPVAFDSDCREGIC 63 Query: 86 GSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G+CG ++G N C M+ + P V++DLVVD Sbjct: 64 GTCGFLVNGEAHGPLRNATICQTHMRHFHDGDVLRLEPWRAAAFPVVRDLVVDRGALDRI 123 Query: 136 HRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++T A L D + C+ C C +CP N+ L Sbjct: 124 VAAGGYVSVRTGGAPDANALPVPKTDADRAMEAAACIGCGACVAACP----NASAALFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E E C +I C CP G+ + IA++ Sbjct: 180 AKITHLSLLPQGQPERPLRVRSMAEQARAEGFGHCTSIGECAAVCPAGIQL-EVIARMNR 238 Query: 253 MLLDRK 258 L Sbjct: 239 DFLRAA 244 >gi|260591867|ref|ZP_05857325.1| fumarate reductase, iron-sulfur protein [Prevotella veroralis F0319] gi|260536151|gb|EEX18768.1| fumarate reductase, iron-sulfur protein [Prevotella veroralis F0319] Length = 252 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 75/248 (30%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT+ + L+ L + ++ D CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTHEMKNIPDDTSFLEMLDILNEELIEAGDEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRTAFD 126 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ + +D + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILISKDNADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAAKRAKAMVAKMDEVGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|213646450|ref|ZP_03376503.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 120 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 3/117 (2%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 G+N++G N LAC+ + I + PLP + VI+DLVVDM FY+Q+ I+P+ Sbjct: 64 GLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY 120 >gi|330997309|ref|ZP_08321162.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Paraprevotella xylaniphila YIT 11841] gi|332881638|ref|ZP_08449286.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|329571104|gb|EGG52811.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Paraprevotella xylaniphila YIT 11841] gi|332680277|gb|EGJ53226.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 252 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 82/249 (32%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + R +R N D + L+ L + ++ CREGI Sbjct: 8 KLRYWRQNGPKD-KGHFDEREMKDIPGDTSFLEMLDILNEQLVEEGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ K + P VIKD +VD + F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRKFKDGDTITVEPWRSAGFPVIKDCMVDRTAFD 126 Query: 134 SQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ +T P+ A +L ++ + C+ C C +C N L Sbjct: 127 KIMQAGGYVTVRTGQPQDANAILIPKQNADEAMDCASCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK + A IA++ Sbjct: 183 VSSKVSQLALLPQGRPEAARRAKAMIAKMDELGFGNCTNTRACEAVCPKCESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREFIKAKL 250 >gi|171913736|ref|ZP_02929206.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Verrucomicrobium spinosum DSM 4136] Length = 265 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 76/243 (31%), Gaps = 23/243 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLL----YIKNKIDPTLTLRRSCREGIC 85 +++R L+ + I + CREGIC Sbjct: 9 IKVWRQ-ASANAKGYFQDIEATNIPETASFLEMMDIVNRRIIESGGDPVAFDHDCREGIC 67 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS- 134 G+C M I+G C M+ ++ P VIKDL VD S F Sbjct: 68 GTCSMVINGIPHGPERATTTCQLHMRKFHDGDTIWIEPFRAKAFPVIKDLAVDRSAFDRI 127 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 Q ++T S + A L S E EC+ C C SC N+ L + Sbjct: 128 QAAGGFISVRTGSAQDANSLPISKEAADAAMDAAECIGCGACVASCK----NASAMLFVS 183 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + E L + D C C +CPK ++ + I K+ Sbjct: 184 AKAGQLNSLPQGQPEKHRRVLGMVKTMDEAGFGNCTNQYECEAACPKEIS-VRWITKLNR 242 Query: 253 MLL 255 Sbjct: 243 DYA 245 >gi|309792532|ref|ZP_07686995.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Oscillochloris trichoides DG6] gi|308225435|gb|EFO79200.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Oscillochloris trichoides DG6] Length = 233 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 74/230 (32%), Gaps = 32/230 (13%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT- 97 +D DL G + + CREGICG C + I+G Sbjct: 1 MSFLEMLDVVNEDLILKG--------------EDPIAFDHDCREGICGMCSLMINGVAHG 46 Query: 98 -----LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQHRSIE-PWLKTVS 147 C M+ K + P VIKDL VD + F ++ + T S Sbjct: 47 PNQGVTTCQLHMRSFKDGDTITIEPWRAQPFPVIKDLAVDRAAFDRIIQAGGFISVSTGS 106 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 A + C+ C C +CP N+ L + +L + Sbjct: 107 APDANAVQVPKPAADSAMDAAACIGCGACVAACP----NASAMLFVGAKIAHLGFLPQGQ 162 Query: 208 DEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E L+ + D C I C+ CPK + IA++ L+ Sbjct: 163 AERSQRALNMVTQMDAEGFGSCTNIGECSAVCPKEIKL-DVIARMNRDLI 211 >gi|119717769|ref|YP_924734.1| fumarate reductase iron-sulfur subunit [Nocardioides sp. JS614] gi|119538430|gb|ABL83047.1| succinate dehydrogenase subunit B [Nocardioides sp. JS614] Length = 258 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 9/210 (4%) Query: 55 CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKG--AIA 112 G +VLD + ++ L +R +C+ G CGSC ++G L C+ + D I Sbjct: 28 EGEVVLDAIHRVQATQAGDLAVRWNCKAGKCGSCSAEVNGRPRLMCMTRLSDFDPAETIT 87 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V P+ VI+DLV D+S Y + R + + + + D ++ +C+ Sbjct: 88 VTPMRSFPVIRDLVTDVSFNYEKARELPSFAPP-PRDADGKRRMAQVDVERGQEFRKCIE 146 Query: 173 CACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C +C + N + GP L+ + D +R + L C+ Sbjct: 147 CFLCQNTCHVIRDHEENKPAFAGPRFFLRYAELDMHPLD--THDRRALAQAAAGLGMCNI 204 Query: 230 IMNCTQSCPKGLNPAK-AIAKIKMMLLDRK 258 CT+ CP+G+ AI +K ++DRK Sbjct: 205 TKCCTEVCPEGIRITDNAIIPMKERVVDRK 234 >gi|153005464|ref|YP_001379789.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Anaeromyxobacter sp. Fw109-5] gi|152029037|gb|ABS26805.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Anaeromyxobacter sp. Fw109-5] Length = 276 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 87/250 (34%), Gaps = 25/250 (10%) Query: 28 KEYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLL----YIKNKIDPTLTLRRSCRE 82 I+R NP + G + + + N L+ L + ++ + CRE Sbjct: 3 ISLDIWRQKNPRDPG--RFERHELPEVNEHMSFLEMLDVLNQRLVSEGKEPVAFDSDCRE 60 Query: 83 GICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF 132 GICG CG I+G N C M+ K + P V++DL+VD + Sbjct: 61 GICGMCGFLINGEAHGPLRNATVCQTHMRHFKDGDVLRLEPWRAAAFPVLRDLIVDRTAL 120 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + +T S A ++L +D + C+ C C SCP+ L Sbjct: 121 DRIIAAGGYTSTRTGSAAEANQILVPKQDADRAMEAAACIGCGACVASCPNAAAA----L 176 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L + E + C TI C CP G+ + I++ Sbjct: 177 FTGAKIAHLGHLPQGQPERLARAISMTNQARAEGFGHCTTIGECEAVCPAGIKL-EVISR 235 Query: 250 IKMMLLDRKI 259 + +L + Sbjct: 236 MNKDVLKATL 245 >gi|312796838|ref|YP_004029760.1| succinate dehydrogenase iron-sulfur protein [Burkholderia rhizoxinica HKI 454] gi|312168613|emb|CBW75616.1| Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) [Burkholderia rhizoxinica HKI 454] Length = 133 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 51/120 (42%), Positives = 81/120 (67%), Gaps = 1/120 (0%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + IYR++PD P M TY ++LD+ M+LD L+ +K +D T++ RRSCREG+CGS Sbjct: 4 RIFEIYRYDPDKDAAPRMQTYEIELDSHDRMLLDALVKLKA-VDETISFRRSCREGVCGS 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 MNI+G N LAC+ ++ D+ I + PLP + V++DL+ D + F++Q+ SI+P+L Sbjct: 63 DAMNINGKNGLACLTNLNDLPHKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLNQRH 122 >gi|39996280|ref|NP_952231.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|39983160|gb|AAR34554.1| fumarate reductase, iron-sulfur protein [Geobacter sulfurreducens PCA] gi|298505292|gb|ADI84015.1| succinate dehydrogenase/fumarate reductase, iron-sulfur protein [Geobacter sulfurreducens KN400] Length = 253 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 81/255 (31%), Gaps = 34/255 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + Y +PD +D +L IK DP + Sbjct: 14 VWRQKGPKDPGKFEVYEAKDVSPDQSFLEMLDDVNEEL-------------IKQGKDP-I 59 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG C I+G C M+ K A+Y P +IKD Sbjct: 60 AFDHDCREGICGMCSQVINGIPHGGMDRTTVCQLHMRMFKNGDAIYIEPWRARAFPIIKD 119 Query: 125 LVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD + ++ T LL +D EC+ C C CP Sbjct: 120 LVVDRGALDTIIQAGGYTSAHTGGVADGNALLIPKDDADYAMDAAECIGCGACVAGCP-- 177 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGL 241 N L + + L + E E C C +CPKG+ Sbjct: 178 --NGSAMLFTSAKVSQLAVLPQGKAEATRRVKAMTETLQECGFGNCTNHYECQAACPKGI 235 Query: 242 NPAKAIAKIKMMLLD 256 N K IA + L Sbjct: 236 N-VKFIATLNREYLK 249 >gi|87306794|ref|ZP_01088940.1| succinate dehydrogenase [Blastopirellula marina DSM 3645] gi|87290167|gb|EAQ82055.1| succinate dehydrogenase [Blastopirellula marina DSM 3645] Length = 287 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 92/260 (35%), Gaps = 36/260 (13%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP------TLTLRRSCR 81 ++ R N P + + + ++ + + +C Sbjct: 18 TVKVLRKNGPGQPS--YWAYFTIPYEPELNVISVLQKIAARGQEDGGKKCAPVCWDCNCL 75 Query: 82 EGICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 E +CG+C M I+G +C + + + + P+ V++DL+VD S + + Sbjct: 76 EEVCGACTMVINGKVRQSCSALIDVLLDEHGSTLELRPMTKFPVVRDLMVDRSRMFQALK 135 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPSY------------- 183 ++ W+ + Q+ L EC+ C CC +CP Y Sbjct: 136 KVKAWVPVDGYYDLGPGPKQSMAAQEAAYPLSECMTCGCCLEACPQYSKIELDQQSGEST 195 Query: 184 --------WWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCT 234 ++GP + Q + ++ E + ER+D + D + C NC Sbjct: 196 EAFQERKAETFDANFVGPHAISQVVLFNMNPTGEMNKRERMDAITDEGGIQVCGNAQNCV 255 Query: 235 QSCPKGLNPAKAIAKIKMML 254 CPK + ++IAKI Sbjct: 256 AVCPKHIPLTRSIAKIGRDA 275 >gi|283778656|ref|YP_003369411.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pirellula staleyi DSM 6068] gi|283437109|gb|ADB15551.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Pirellula staleyi DSM 6068] Length = 299 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 97/281 (34%), Gaps = 38/281 (13%) Query: 8 KRSRVKRGKIWNAPTGEKNLKEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYI 66 G + + + E R+ R + P + + V + V+ L I Sbjct: 10 ANGHSHDGHGHDEHGHKPDHIEVRVLRQDGPGQPS--YWERHSVKYEA-DMNVISVLQRI 66 Query: 67 KNK-------IDPTLTLRRSCREGICGSCGMNIDGTNTLAC----VKDMKDIKGAIAVYP 115 + +C E +CG+C M I+G AC K + D I + P Sbjct: 67 AANAKNAEGKHVAPVAWDCNCLEEVCGACTMVINGKVRQACSALVDKLLSDNPAEIELQP 126 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH-EDRQKIDGLYECVMCA 174 + V++DL VD + +S ++ W+ + ED++ L +C+ C Sbjct: 127 MTKFPVVRDLAVDRTRLFSALSRVKAWVPVDGYYDMGAGPRYPAEDQETAYPLSQCMSCG 186 Query: 175 CCSTSCPSY---------------------WWNSDRYLGPAILLQAYRWLIDSRDEF-QG 212 CC +CP Y ++GP + QA + + G Sbjct: 187 CCVEACPQYTKVELERIEGETEEAYNARCKADYDRAFVGPHAISQAMLFNQHPTGKNIAG 246 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ERLD L L C NC CPK + +IA+ Sbjct: 247 ERLDALTAEGGLQVCGNAQNCVAVCPKLIPLTTSIARAGRA 287 >gi|255037719|ref|YP_003088340.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Dyadobacter fermentans DSM 18053] gi|254950475|gb|ACT95175.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Dyadobacter fermentans DSM 18053] Length = 250 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 87/246 (35%), Gaps = 23/246 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +++R + + + Y +D + L+ + ++ ++ CREGIC Sbjct: 5 LKVWRQS-NKDAAGGFEEYKLDHVSPDMSFLEMFDVLNEQLIEEGKEPVSFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G+C M I+G C M+ + P VIKDLVVD F Sbjct: 64 GACSMYINGRPHGPLRGVTTCQLHMRSFNDGDTIVVEPWRAQAFPVIKDLVVDRDAFDRV 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + T + + A L + E C+ C C +C + L + Sbjct: 124 ISAGGFVSVNTGNAQDANALPIAKEAADDAFAAAACIGCGACVAACKNA----SAMLFVS 179 Query: 195 ILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + E++ D C C+ CPK ++ + IA++ Sbjct: 180 AKISQLALLPQGQAERSIRAEKMVAQMDAEGFGACTNTGACSAECPKEISL-ENIARMNR 238 Query: 253 MLLDRK 258 + K Sbjct: 239 EYIGAK 244 >gi|289443006|ref|ZP_06432750.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis T46] gi|289415925|gb|EFD13165.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis T46] Length = 189 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 5/174 (2%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 + R+ P+ + P Y V L VLDGL YIK+ +D TL+ R SCR GICGS GM Sbjct: 8 EVSRYRPEIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 91 NIDGTNTLACVKDMKDI-KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVS 147 I+G LAC + D G + V P+ + VI+DLVVD+S F ++ S++PW Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 P E Q+ + C+ C C ++CP Y + D +L ++++ R Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLDRLVVVRPGR 179 >gi|108758026|ref|YP_633374.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Myxococcus xanthus DK 1622] gi|108461906|gb|ABF87091.1| fumarate reductase, iron-sulfur protein [Myxococcus xanthus DK 1622] Length = 270 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 82/259 (31%), Gaps = 34/259 (13%) Query: 16 KIWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW P + Y + D +D L G + Sbjct: 6 QIWRQERPRSLGAFRRYEVSDITADMSFLEMLDVLNEQLAAKG--------------EAP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLA------CVKDMKDIKGA--IAVYPLPH--MSVIK 123 + CREGICG+CG+ I+G C M+ + + P V+K Sbjct: 52 VAFESDCREGICGTCGVMINGAAHGPLGGAAVCQLHMRRFPDGALLVIEPWRARAFPVLK 111 Query: 124 DLVVDMSHFYSQH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S + T + A S ++ C+ C C +CP Sbjct: 112 DLIVDRSALDRIIGAGGFISVPTGAAPEASTRAVSKQNADGAMDAAACIGCGACVAACP- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + L R E + L + D C C +CPK Sbjct: 171 ---NASAALFTGAKVSHLALLPQGRPERERRVLSMVARMDEEGFGNCTWHGECQAACPKS 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ AIA + L I Sbjct: 228 ISI-DAIALMNHEWLRASI 245 >gi|227540153|ref|ZP_03970202.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Sphingobacterium spiritivorum ATCC 33300] gi|227240014|gb|EEI90029.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Sphingobacterium spiritivorum ATCC 33300] Length = 248 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 85/251 (33%), Gaps = 34/251 (13%) Query: 16 KIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW L +Y + NP +DT L + D Sbjct: 6 KIWRQEDRNSAGKLVDYELENLNPHMSFLEMLDTLNEKLIV--------------ENDQP 51 Query: 74 LTLRRSCREGICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG CGM I+G NT C ++ K V+ P V K Sbjct: 52 VEFDHDCREGICGQCGMMINGIAHGPLENTTTCQLHLRTFKDGETVFIEPFRSHAFPVKK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD S F S + T A + +H+ + C+ C C +C Sbjct: 112 DLKVDRSAFDRIISSGGFVSVNTGQAPDAHAIPVTHQSTEAAFDAAACIGCGACVATCK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L + + L R+E ++ + D C C CP+G Sbjct: 171 ---NGSAALFTSAKIAHMALLPQGREERNERVINMVQQMDQEFFGHCSNTEACEVECPQG 227 Query: 241 LNPAKAIAKIK 251 ++ IA++ Sbjct: 228 ISVIN-IARMN 237 >gi|78189886|ref|YP_380224.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobium chlorochromatii CaD3] gi|78172085|gb|ABB29181.1| succinate dehydrogenase subunit B [Chlorobium chlorochromatii CaD3] Length = 248 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 79/254 (31%), Gaps = 34/254 (13%) Query: 17 IWNAPTG--EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 IW + + Y + +PD +D L G + + Sbjct: 7 IWRQKNATAQGRMVTYTVSNISPDCSFFEMLDILNQQLILSG--------------EEPV 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG+C + I+G C M+ + A+ P ++D Sbjct: 53 AFDHDCREGICGTCSLYINGRPHGPLKGVTTCQLHMRSFRDGDAITVEPWRAKAFPTVRD 112 Query: 125 LVVDMSHFYSQHRS-IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 LVVD S ++ + T A + + D C+ C C +C Sbjct: 113 LVVDRSALDRLIQAGGYVSVNTGGVPDANSIPVAKTDSDAAFDAAACIGCGACVAACH-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N+ L + + L R E + + D C C CPK + Sbjct: 171 --NASAMLFVGAKVSHFALLPQGRVEAERRVSHMVACMDELGFGHCSNSYACEAECPKEI 228 Query: 242 NPAKAIAKIKMMLL 255 IA++ L Sbjct: 229 KVV-HIARMNREFL 241 >gi|187735482|ref|YP_001877594.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425534|gb|ACD04813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 255 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 23/246 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTY---YVDLDNCGPMVLDGLLY-IKNKIDPTLTLRRSCREGI 84 +++R + + ++TY + +D +LD + + + + CREGI Sbjct: 8 TLKVWRQE-NREAKGRIETYAAKDIPVDASFLEMLDIVNEGLVKEGKEPIHFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ K V+ P +++DL+VD S Sbjct: 67 CGMCSLTINGIPHGPERQVTTCQLHMRKFKDGDTVWIEPFRAKAFPILRDLMVDRSALDR 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + P + + C+ C C SC N+ L Sbjct: 127 IIAAGGYIDVRTGSAPNANNIAVEKVKADAAFDAAACIGCGACVASCK----NASAMLFT 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E L + + C C +CPKG++ IA++ Sbjct: 183 SAKIAHLNLLPQGQPERSKRVLAMMKQMEAEGFGNCTNQYECEAACPKGIS-VDNIARLN 241 Query: 252 MMLLDR 257 + Sbjct: 242 RDFMRA 247 >gi|149193916|ref|ZP_01871014.1| fumarate reductase, iron-sulfur subunit [Caminibacter mediatlanticus TB-2] gi|149135869|gb|EDM24347.1| fumarate reductase, iron-sulfur subunit [Caminibacter mediatlanticus TB-2] Length = 236 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 10/221 (4%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I R++ D + D +L+ L R CR ICG+C + Sbjct: 5 IKRFD---GNRHYFDEFEFDFK-EDETILELLDR--ANYKKRFAYRSFCRSAICGTCAVK 58 Query: 92 IDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 ++ LAC +KD + V P+ V++DLVVD S+ + W + Sbjct: 59 VNDRTVLACKSKVKDLIQNDEVIVEPVDRSVVLRDLVVDHSYIEKSIKDNRLWFVDEIDE 118 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + LQ+ E+ +K D +C++C C C + ++ D + GP + + +R++ DSRD+ Sbjct: 119 TKEN-LQTPEELKKYDKQTDCILCMACHFECEALDYDKD-FAGPFVFTKYFRFVFDSRDK 176 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + L LY C C CPK + A I + Sbjct: 177 SDKQERIELAKENGLYNCINCQKCVYVCPKHIASAFDIKML 217 >gi|300771878|ref|ZP_07081749.1| fumarate reductase subunit B [Sphingobacterium spiritivorum ATCC 33861] gi|300761264|gb|EFK58089.1| fumarate reductase subunit B [Sphingobacterium spiritivorum ATCC 33861] Length = 248 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 86/251 (34%), Gaps = 34/251 (13%) Query: 16 KIWNAP--TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW + L +Y + NP +DT L + D Sbjct: 6 KIWRQEDRNSKGKLVDYELENLNPHMSFLEMLDTLNEKLIV--------------ENDQP 51 Query: 74 LTLRRSCREGICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG CGM I+G NT C ++ K V+ P V K Sbjct: 52 VEFDHDCREGICGQCGMMINGIAHGPLENTTTCQLHLRTFKDGETVFIEPFRSHAFPVKK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD S F S + T A + +H+ + C+ C C +C Sbjct: 112 DLKVDRSAFDRIISSGGFVSVNTGQAPDAHAIPVTHQSTEAAFDAAACIGCGACVATCK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L + + L R+E ++ + D C C CP+G Sbjct: 171 ---NGSAALFTSAKIAHMALLPQGREERNERVINMVQQMDQEFFGHCSNTEACEVECPQG 227 Query: 241 LNPAKAIAKIK 251 ++ IA++ Sbjct: 228 ISVIN-IARMN 237 >gi|189425271|ref|YP_001952448.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Geobacter lovleyi SZ] gi|189421530|gb|ACD95928.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 251 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 23/252 (9%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRS 79 + ++R + + Y V L+ L + + + Sbjct: 5 KTMTINLVVWRQK-NANDTGKFENYTVKGITEHHSFLEMLDVLNEDLIKAGKQPVAFDHD 63 Query: 80 CREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDM 129 CREGICG C I+G C M+ +Y P ++KDLVVD Sbjct: 64 CREGICGMCSQVINGMPHGGQERTTVCQLHMRKFHDGDTIYIEPWRARAFPIVKDLVVDR 123 Query: 130 SHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 ++ T +L + EC+ C C CP N Sbjct: 124 EALDKIIQAGGYTSCHTGGVADGNAILIPKPAADEAMDAAECIGCGACVAGCP----NGA 179 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 L + L + E + + + C C +CPKG+N K Sbjct: 180 AMLFTGAKVSQLAVLPQGKVEAKARVTNMVQAMKDCGFGNCTNHYECMAACPKGIN-VKF 238 Query: 247 IAKIKMMLLDRK 258 IA++ + + Sbjct: 239 IARMNREYIKAQ 250 >gi|300776622|ref|ZP_07086480.1| fumarate reductase subunit B [Chryseobacterium gleum ATCC 35910] gi|300502132|gb|EFK33272.1| fumarate reductase subunit B [Chryseobacterium gleum ATCC 35910] Length = 250 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 88/262 (33%), Gaps = 38/262 (14%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 KIW E L Y + NP +DT L G D Sbjct: 6 KIWRQKDRKSEGKLVPYDLKGLNPHMSFLEMLDTLNEKLIIAG--------------DEP 51 Query: 74 LTLRRSCREGICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICG CGM I+G NT C ++ K + P V K Sbjct: 52 VEFDHDCREGICGQCGMMINGIAHGPLKNTTTCQLHLRSFKDGETILIEPFRAEAFPVKK 111 Query: 124 DLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL VD S F S + T A + +H+ ++ C+ C C +C Sbjct: 112 DLKVDRSAFDRIISSGGFVSVNTGQAPDATAIPVTHQTAEEAFDSAACIGCGACVATCK- 170 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N L + + L ++E LD + D C C CP+G Sbjct: 171 ---NGSAALFTSAKITHMALLPQGKEERNKRVLDMVTQMDTELFGHCSNTEACEVECPQG 227 Query: 241 LNPAKAIAKI----KMMLLDRK 258 ++ IA++ L RK Sbjct: 228 ISVLN-IARMNFEYNRALFFRK 248 >gi|282858652|ref|ZP_06267810.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella bivia JCVIHMP010] gi|282588570|gb|EFB93717.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella bivia JCVIHMP010] Length = 251 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 + +R N + DT + L+ L + ++ CREGI Sbjct: 8 TLKYWRQN-GPQAKGHFDTREMKNIPDDTSFLEMLDILNEELINEGQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKD +VD + F S Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRTAFDS 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T + A +L +D + C+ C C +C N L Sbjct: 127 IMQAGGYTTVRTGQAQDANAILIPKQDADEAMDCASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + + C C CPK + A IA++ Sbjct: 183 SSKVSQLALLPQGKPEAAKRAKAMIAKMEEVGFGNCTNTRACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIKAKL 249 >gi|288925949|ref|ZP_06419879.1| fumarate reductase, iron-sulfur protein [Prevotella buccae D17] gi|315606897|ref|ZP_07881904.1| fumarate reductase subunit B [Prevotella buccae ATCC 33574] gi|288337373|gb|EFC75729.1| fumarate reductase, iron-sulfur protein [Prevotella buccae D17] gi|315251405|gb|EFU31387.1| fumarate reductase subunit B [Prevotella buccae ATCC 33574] Length = 252 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 80/249 (32%), Gaps = 24/249 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + ++ N DT + L+ L + ++ CREGI Sbjct: 8 TIKYWKQNGPKD-KGHFDTREMKNIPDDTSFLEMLDILNEELINEGKEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRGAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ ++T + A +L ++ + C+ C C +C N L Sbjct: 127 KIIQAGGYTSVRTGQAQDANAILIPKDNADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L R E + D C C CPK + A IA++ Sbjct: 183 VSSKVSQLALLPQGRPEAAKRAKAMVARMDELGFGNCTNTRACEAVCPKNESIAN-IARL 241 Query: 251 KMMLLDRKI 259 + K+ Sbjct: 242 NREFIVAKM 250 >gi|269468070|gb|EEZ79784.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [uncultured SUP05 cluster bacterium] Length = 241 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R + TY VD + L+ L + ++ + + CREGI Sbjct: 4 TLHIWRQK-TTDISGVFVTYQVDNIDDDTSFLEMLDQLNEQLITKGEDCIVFDYDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDI--KGAIAVYPLPH--MSVIKDLVVDMSHFYS 134 CG+C + I+G C M++ + + V P VIKDL VD S F Sbjct: 63 CGACSLVINGHPHGEKSATTTCQLYMREYKNQTELWVEPWRASSFPVIKDLTVDRSSFDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +S + T A L + C+ C C CP+ + L Sbjct: 123 IIQSGGYVSVHTGLAPEANNTLVEKCASDEAFNAATCIGCGACVAVCPNASAS----LFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L E + + C +C + CPKG++ I ++ Sbjct: 179 GAKISHLALLPQGGIESNDRANSMIQKMEDEGFGSCSNHRHCERVCPKGISLQN-ITRMN 237 Query: 252 MML 254 +L Sbjct: 238 RIL 240 >gi|307564726|ref|ZP_07627254.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella amnii CRIS 21A-A] gi|307346448|gb|EFN91757.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prevotella amnii CRIS 21A-A] Length = 251 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 82/248 (33%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 + +R + + DT + L+ L + ++ CREGI Sbjct: 8 TLKYWRQS-GPQAKGYFDTREMKNIPDDTSFLEMLDILNEELINEGQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKD +VD + F Sbjct: 67 CGMCSLYINGHPHGPATGATTCQLYMRRFNDGDVITVEPWRSAAFPVIKDCMVDRTAFDK 126 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ ++T + A +L +D + C+ C C +C N L Sbjct: 127 IMQAGGYTTVRTGQAQDANAILIPKQDADEAMDCASCIGCGACVAACK----NGSAMLFV 182 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + + L + E + + C C CPK + A IA++ Sbjct: 183 SSKVSQFALLPQGKPEAAKRVKAMIAKMEEVGFGNCTNTRACEAECPKNESIAN-IARLN 241 Query: 252 MMLLDRKI 259 + K+ Sbjct: 242 REFIKAKL 249 >gi|118580894|ref|YP_902144.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pelobacter propionicus DSM 2379] gi|118503604|gb|ABL00087.1| succinate dehydrogenase subunit B [Pelobacter propionicus DSM 2379] Length = 252 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 79/252 (31%), Gaps = 23/252 (9%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRS 79 + ++R D +TY L+ L + + + Sbjct: 5 KTMTLTLIVWRQK-DASDPGKFETYTAKNITEHHSFLEMLDVVNEDLILAGKEPIAFDHD 63 Query: 80 CREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDM 129 CREGICG C I+G C M+ K +Y P +IKDLVVD Sbjct: 64 CREGICGMCSQIINGAAHGGQERTTVCQLHMRKFKDGDTIYIEPWRARAFPIIKDLVVDR 123 Query: 130 SHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + ++ T +L + EC+ C C CP N Sbjct: 124 TALDTIVQAGAYVSCHTGGVPDGNAILIPKPIADESMDAAECIGCGACVAGCP----NGA 179 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 L + + L + E + C C +CPKG+N K Sbjct: 180 AMLFTGAKVSQFAVLPQGKGEAVTRVKALVKTMKECGFGNCTNHYECQAACPKGIN-VKF 238 Query: 247 IAKIKMMLLDRK 258 IA++ + + Sbjct: 239 IARMNREFIKAQ 250 >gi|281424776|ref|ZP_06255689.1| fumarate reductase, iron-sulfur protein [Prevotella oris F0302] gi|299142027|ref|ZP_07035161.1| fumarate reductase, iron-sulfur protein [Prevotella oris C735] gi|281401146|gb|EFB31977.1| fumarate reductase, iron-sulfur protein [Prevotella oris F0302] gi|298576489|gb|EFI48361.1| fumarate reductase, iron-sulfur protein [Prevotella oris C735] Length = 252 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 80/248 (32%), Gaps = 24/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 + ++ N DT + L+ L + ++ CREGI Sbjct: 8 TIKYWKQNGPQDQ-GHFDTREMKNIPDDTSFLEMLDILNEELIDDGQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT-------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 CG C + I+GT C M+ + P VIKD +VD S F Sbjct: 67 CGMCSLYINGTPHGKTERGATTCQLYMRRFNDGDVITVEPWRSAGFPVIKDCMVDRSAFD 126 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ ++T + A +L S E+ + C+ C C +C N L Sbjct: 127 KIIQAGGYTSIRTGQAQDANAILISKENADEAMDCATCIGCGACVAACK----NGSAMLF 182 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + D C C CPK A IA++ Sbjct: 183 VSSKVSQLALLPQGKPEAARRAKAMVARMDELGFGNCTNTRACEAVCPKNEKIAN-IARL 241 Query: 251 KMMLLDRK 258 + K Sbjct: 242 NREFIKAK 249 >gi|320354444|ref|YP_004195783.1| succinate dehydrogenase subunit B [Desulfobulbus propionicus DSM 2032] gi|320122946|gb|ADW18492.1| succinate dehydrogenase subunit B [Desulfobulbus propionicus DSM 2032] Length = 254 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 89/246 (36%), Gaps = 25/246 (10%) Query: 30 YRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGI 84 +I+R N P +G + + + + L+ + + K + CREGI Sbjct: 10 VKIWRQNGPLAQGA--FEEHALKDISTDSSFLEMIDVLNEWLTIKGLEPIAFDHDCREGI 67 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG CG ++GT C M+ K + P ++KDL+VD S Sbjct: 68 CGMCGAVVNGTAHGPDKETTLCQLHMRRFKNGDTIVIEPFRSQGFPIVKDLIVDRSALDR 127 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T SP+ +L ++ C+ C C+ +CP N L Sbjct: 128 IIAAGGYVSVNTGSPQDGNTILIPQHVAEQAMDAAACIGCGACAAACP----NGTPMLFL 183 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + E + ++ + D C C CPKG+ + IA++ Sbjct: 184 GAKVSQFALLPQGQLEAKKRAINMVMQMDKEGFGNCGNERECENVCPKGITI-RNIARLN 242 Query: 252 MMLLDR 257 L Sbjct: 243 REFLKA 248 >gi|300779940|ref|ZP_07089796.1| fumarate reductase subunit B [Corynebacterium genitalium ATCC 33030] gi|300534050|gb|EFK55109.1| fumarate reductase subunit B [Corynebacterium genitalium ATCC 33030] Length = 249 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 91/249 (36%), Gaps = 25/249 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 I+R PD +GN +T VD +L+ L ++ N + T CREG Sbjct: 4 TLEIWRQAGPDTEGN--FETVQVDDAVEQMSILELLDHVNNARVEAGEEPFTFASDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG+CG++++G AC++ + + K + P VIKDL VD S Sbjct: 62 ICGTCGLSVNGRPHGAGQNTTACLQRLWNYKDGDTLKIEPFRSAAFPVIKDLTVDRSALD 121 Query: 134 SQHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 P + L +H+ +K C+ C C +CP N +L Sbjct: 122 RVMEQGGYVSIQAGTAPDADTLHVNHQTAEKALDFAACIGCGACVAACP----NGAAHLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNP--AKAIAK 249 L + L ++E +++ C C CP G+ AI K Sbjct: 178 TGAKLNHLKLLPLGKEERGKRARQMVDELETNFGHCTLFGECADVCPAGIPLEAVGAINK 237 Query: 250 IKMMLLDRK 258 + R Sbjct: 238 ERARAAFRG 246 >gi|256826112|ref|YP_003150072.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Kytococcus sedentarius DSM 20547] gi|256689505|gb|ACV07307.1| succinate dehydrogenase subunit B [Kytococcus sedentarius DSM 20547] Length = 243 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 22/246 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +I+R + + TY VD L+ L + ++ + + CREG Sbjct: 3 ITLKIWRQD-GAGDAGRLVTYEVDGVTEDMSFLEMLDVLNEELTEAGEEPVAFESDCREG 61 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKG-------AIAVYPLPH--MSVIKDLVVDMSHFYS 134 ICG+CG ++G + + + + P ++KDLVVD S + Sbjct: 62 ICGACGFMVNGVAHGPERTTLCQLHMRSFSDGDTLTLEPFRATAFPIVKDLVVDRSSYDR 121 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 S + T + A + C+ C C+ + N+ L Sbjct: 122 IIESGGYISVNTGAAVDANSTPVPKVAADRAFDAATCIGCGACAAA----CPNAAGMLFL 177 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E ++ D C I C CPKG+ P I+++ Sbjct: 178 GAKITHLGELPQGQPERDSRVINMTNQHDEEGFGGCTNIGECAAVCPKGI-PLDVISQLN 236 Query: 252 MMLLDR 257 L Sbjct: 237 KDLRKA 242 >gi|225871797|ref|YP_002753251.1| fumarate reductase iron-sulfur protein [Acidobacterium capsulatum ATCC 51196] gi|225793705|gb|ACO33795.1| fumarate reductase iron-sulfur protein [Acidobacterium capsulatum ATCC 51196] Length = 265 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 82/243 (33%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +I+R TY +D N +L+ L + + + + CREGI Sbjct: 4 TLKIWRQK-SRDEKGRFVTYSLDDVNPEMSMLECLDVLNESLMQKGEEPVAFEHDCREGI 62 Query: 85 CGSCGMNIDG------TNTLACVKDMKDIKG--AIAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG I+G T C M+ K + + P +KDLVVD Sbjct: 63 CGSCGFMINGIAHGPQRATTVCQLTMRHFKDGEELTIEPWRAAAFPSVKDLVVDRRALDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T + + + + C+ C C +CP+ + L Sbjct: 123 IIQAGGYISVSTGNAPDGNTIPVAKGIADRAMDAAACIGCGACVAACPNASAS----LFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E L + C I CT +CPK + + IA + Sbjct: 179 GAKITHLGILPQGKPEQDRRALAMVAQMSVEPFGGCTNIGECTSACPKEIQ-QEVIATMN 237 Query: 252 MML 254 Sbjct: 238 RDY 240 >gi|308273901|emb|CBX30501.1| hypothetical protein N47_K27410 [uncultured Desulfobacterium sp.] Length = 223 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 11/224 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 +I+R +P+ + VD++ VL+ L+ I + D +L CR G C Sbjct: 2 KKIRVKIFRHDPEETDKNGWQEFAVDVEEK-STVLEALMRIYDTQDSSLAFNHGCRAGNC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G C +NI+G AC + + PL H+ +IKD+V D + F+ + P++ Sbjct: 61 GLCAVNINGHPRYACTSKITANAD---ISPLRHLPLIKDMVFDRAAFFRELEKFRPYIVR 117 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + A+ + + D L C C C +SCP Y + + GP ++ + D Sbjct: 118 KNEPEAEPEILL--QPLEHDRLMSCRECFACLSSCPRYDYRDKSFGGPLAFVKLAQLHYD 175 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 RD +R+ + C C +C G+ + + + Sbjct: 176 VRDSL--DRVSQ-SRELGILNCADCAGC--ACISGIPIKRIVIR 214 >gi|154503094|ref|ZP_02040154.1| hypothetical protein RUMGNA_00917 [Ruminococcus gnavus ATCC 29149] gi|153796335|gb|EDN78755.1| hypothetical protein RUMGNA_00917 [Ruminococcus gnavus ATCC 29149] Length = 233 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 RI R + + P + ++ + + L+ + +K ++ C Sbjct: 4 TIRIKRQE-NKEAKPFWQEFEIEAEGELSIAAMLNELNARQKLTDKSGKEAEPISWECGC 62 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAV-YPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+G LAC ++ +KG + V PL V+KDL+VD S + + I Sbjct: 63 MVKKCGACAMRINGLPELACSTFLQSLKGKVIVLEPLSKFPVVKDLIVDRSVVFENLKKI 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + C+MC CC CP++ + D + G + A Sbjct: 123 NLWLESDAYMTEYTH-------EIRYQSARCLMCGCCLEVCPNFDFGKD-FAGAIAPVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YR L + +D E++ C ++C CP G+ + + + + +K Sbjct: 175 YRILNEEQDTSHHEQIAEKYRKHYFEGCGKSLSCQNICPAGIPVEELMVRSNAAAVWKK 233 >gi|301062409|ref|ZP_07203070.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [delta proteobacterium NaphS2] gi|300443522|gb|EFK07626.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [delta proteobacterium NaphS2] Length = 226 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 11/222 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + ++ R +P+ K D + V ++ VL+ L+ I + D +L CR CG Sbjct: 4 IKVKVLRHDPEGKVKDKFDEFEVSVEEK-STVLEALMKIYDTRDSSLAFEHGCRAQNCGL 62 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C +N++G AC M I + PL H+ +I+DLV D F+S P++ Sbjct: 63 CVVNLNGHPRYAC---MARITADAEITPLKHLPLIRDLVFDRRPFFSYLAKFRPYVVREK 119 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 ++ + L C C C +SCP+Y +D + GP ++ + D R Sbjct: 120 DPDE--EPETLLQPPEHSKLMSCRECFACLSSCPTYDCQNDSFGGPLGFVKLAQLHYDRR 177 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D +R+ + C CT C G+ K + + Sbjct: 178 DCL--DRVSQAR-EMGILNCMDCSACT--CISGIPLNKIVIR 214 >gi|50842436|ref|YP_055663.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes KPA171202] gi|50840038|gb|AAT82705.1| succinate dehydrogenase, subunit B [Propionibacterium acnes KPA171202] gi|315105470|gb|EFT77446.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL030PA1] Length = 252 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 77/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R N + + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQN-GPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFMVNGKPHGPLPNTPACRQHLRAFPHITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLIQAGGTVDVMTGTAPAADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLV-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|289425421|ref|ZP_06427198.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes SK187] gi|289427122|ref|ZP_06428838.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J165] gi|295130513|ref|YP_003581176.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Propionibacterium acnes SK137] gi|289154399|gb|EFD03087.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes SK187] gi|289159591|gb|EFD07779.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J165] gi|291376453|gb|ADE00308.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Propionibacterium acnes SK137] gi|313764541|gb|EFS35905.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL013PA1] gi|313772420|gb|EFS38386.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL074PA1] gi|313792230|gb|EFS40331.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA1] gi|313801821|gb|EFS43055.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA2] gi|313807430|gb|EFS45917.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA2] gi|313809938|gb|EFS47659.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL083PA1] gi|313813024|gb|EFS50738.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL025PA1] gi|313816083|gb|EFS53797.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL059PA1] gi|313818476|gb|EFS56190.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL046PA2] gi|313820239|gb|EFS57953.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA1] gi|313822952|gb|EFS60666.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA2] gi|313825120|gb|EFS62834.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL063PA1] gi|313827689|gb|EFS65403.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL063PA2] gi|313830269|gb|EFS67983.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL007PA1] gi|313834070|gb|EFS71784.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL056PA1] gi|313838647|gb|EFS76361.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL086PA1] gi|314915537|gb|EFS79368.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA4] gi|314919995|gb|EFS83826.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA3] gi|314925300|gb|EFS89131.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL036PA3] gi|314932008|gb|EFS95839.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL067PA1] gi|314955877|gb|EFT00277.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL027PA1] gi|314958358|gb|EFT02461.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA1] gi|314960087|gb|EFT04189.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA2] gi|314962888|gb|EFT06988.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL082PA1] gi|314968034|gb|EFT12133.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA1] gi|314973275|gb|EFT17371.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL053PA1] gi|314975950|gb|EFT20045.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL045PA1] gi|314978293|gb|EFT22387.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL072PA2] gi|314984031|gb|EFT28123.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA1] gi|314987794|gb|EFT31885.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA2] gi|314990016|gb|EFT34107.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL005PA3] gi|315078103|gb|EFT50154.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL053PA2] gi|315080733|gb|EFT52709.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL078PA1] gi|315084403|gb|EFT56379.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL027PA2] gi|315085743|gb|EFT57719.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL002PA3] gi|315088839|gb|EFT60815.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL072PA1] gi|315096188|gb|EFT68164.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL038PA1] gi|315098449|gb|EFT70425.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL059PA2] gi|315101193|gb|EFT73169.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL046PA1] gi|315108415|gb|EFT80391.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL030PA2] gi|327326104|gb|EGE67894.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL096PA2] gi|327330811|gb|EGE72557.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL097PA1] gi|327332025|gb|EGE73762.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL096PA3] gi|327443228|gb|EGE89882.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL013PA2] gi|327446013|gb|EGE92667.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL043PA2] gi|327448008|gb|EGE94662.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL043PA1] gi|327450868|gb|EGE97522.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA3] gi|327453055|gb|EGE99709.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL092PA1] gi|327453784|gb|EGF00439.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL083PA2] gi|328753555|gb|EGF67171.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL020PA1] gi|328754287|gb|EGF67903.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL087PA1] gi|328754460|gb|EGF68076.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL025PA2] gi|328760394|gb|EGF73962.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL099PA1] gi|332675348|gb|AEE72164.1| succinate dehydrogenase iron-sulfur subunit [Propionibacterium acnes 266] Length = 252 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 77/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R N + + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQN-GPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFMVNGKPHGPLPNTPACRQHLRAFPHITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLIQAGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLV-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|313837252|gb|EFS74966.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA2] gi|314927728|gb|EFS91559.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL044PA1] gi|314972024|gb|EFT16122.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL037PA3] gi|328907197|gb|EGG26963.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium sp. P08] Length = 252 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R + + + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQD-GPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENNGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFVVNGKPHGPLPNTPACRQHLRAFPNITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLVQAGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVNIPLM-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|255533148|ref|YP_003093520.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pedobacter heparinus DSM 2366] gi|255346132|gb|ACU05458.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Pedobacter heparinus DSM 2366] Length = 248 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 82/239 (34%), Gaps = 23/239 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +I+R D + Y +D L+ + + K+ + + CREGIC Sbjct: 5 LKIWRQT-DAGSIGKLVDYELDEVIPHMSFLEMMDTLNEKLVLAGERPVEFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS- 134 G CGM I+G C M++ K +Y P V +DL VD S F Sbjct: 64 GQCGMMINGRAHGPVAHLTTCQLHMREFKDGDTIYVEPFRAKAFPVKRDLRVDRSAFDRI 123 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + T A + SHE + C+ C C +C NS L Sbjct: 124 IMAGGFVSVNTGQAPEANGIPVSHEQAESAFDAAACIGCGACVATCK----NSSAALFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E + L + D C C CP+ ++ IA++ Sbjct: 180 AKIAHLAKLPQGKVESRKRALSMVQQMDAEDFGHCSNTEACEVECPQSISVLN-IARMN 237 >gi|314923078|gb|EFS86909.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL001PA1] gi|314966846|gb|EFT10945.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL082PA2] gi|314981188|gb|EFT25282.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA3] gi|315091760|gb|EFT63736.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL110PA4] gi|315093233|gb|EFT65209.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL060PA1] gi|315103263|gb|EFT75239.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA2] gi|327327672|gb|EGE69448.1| fumarate reductase, iron-sulfur protein [Propionibacterium acnes HL103PA1] Length = 252 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 76/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R N + + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQN-GPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFMVNGKPHGPLPNTPACRQHLRAFPRITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLIQGGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLV-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|124009833|ref|ZP_01694501.1| fumarate reductase iron-sulfur cluster protein subunit [Microscilla marina ATCC 23134] gi|123984154|gb|EAY24515.1| fumarate reductase iron-sulfur cluster protein subunit [Microscilla marina ATCC 23134] Length = 247 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 81/247 (32%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGIC 85 ++I+R N + Y ++ L+ L Y+ K + + CREGIC Sbjct: 5 FKIWRQN-GPTEKGELKEYLIEGLTEDMSFLEALDYLNEALVLKGEKVIAYEYDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYSQ 135 G CG+ I+G C M+ K + P +IKDL+VD S F Sbjct: 64 GQCGIFINGRAHGPHDHMTTCQLHMRSFKDGETIVVEPWRAASFPIIKDLIVDRSAFDRI 123 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 P L + K C+ C C +C NS L A Sbjct: 124 IEKGAYISARTGTAPEANALPIPKLVADKAMDAAACIGCGACVATCK----NSSAALFTA 179 Query: 195 ILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + E + + C C CP+ ++ A IA++ Sbjct: 180 AKINHLNSLPQGKAEQHQRVQHMTAQMEAEGFGSCTFTGACEVECPEAISIAN-IAEMNA 238 Query: 253 MLLDRKI 259 L + Sbjct: 239 RKLKANL 245 >gi|289759465|ref|ZP_06518843.1| succinate dehydrogenase (iron-sulfur protein subunit) sdhB [Mycobacterium tuberculosis T85] gi|289715029|gb|EFD79041.1| succinate dehydrogenase (iron-sulfur protein subunit) sdhB [Mycobacterium tuberculosis T85] Length = 115 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + T P +E +QS DR + D +C++CACC+TSCP +W Y GPA ++ A+R+ Sbjct: 1 MITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAAIVNAHRF 59 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DSRDE ERLD L + ++RC T NCT+SCP+G+ KAI ++K L+ Sbjct: 60 IFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 112 >gi|226309019|ref|YP_002768979.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis PR4] gi|226188136|dbj|BAH36240.1| putative succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis PR4] Length = 249 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 24/246 (9%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 ++R + PD+ G DTY V+ +L+ L + +++ + + CRE Sbjct: 3 ITVDVWRQSGPDSSGA--FDTYQVNDATVEMSLLELLDRLNDQLVESGNEPIAFDSDCRE 60 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 GICGSCG+ +D C + ++ + P V++DLVVD S Sbjct: 61 GICGSCGITVDDVPHGPVANTPTCRQHLRSFSDGDRIKLEPFRSAAFPVVRDLVVDRSAL 120 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + + A SH+ + C+ C C +CP N +L Sbjct: 121 DRVLEAGGYVSVNAGTAPDADSQPLSHQSAEAALDFAACIGCGACVAACP----NGAAHL 176 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L + R+E C T C + CP + AIA + Sbjct: 177 FTGSKLTHLSLVTQGRNERGKRARAMSHQMEADFGPCSTYGECAEVCPAEIPLT-AIAAV 235 Query: 251 KMMLLD 256 + Sbjct: 236 NKESMR 241 >gi|58699079|ref|ZP_00373915.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534407|gb|EAL58570.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 104 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 50/94 (53%), Positives = 73/94 (77%), Gaps = 1/94 (1%) Query: 1 MVEIMLPKRSRV-KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV 59 MV+ LPK S++ ++GKI+ P KN++ ++IYRW+ D++ NP +DT+++D+D+CGPMV Sbjct: 1 MVQFSLPKNSKINQKGKIYPIPARAKNIRRFQIYRWSADDEKNPRIDTFFIDMDSCGPMV 60 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNID 93 LD L+ IK++ID TLT RRSCREGICGSC + Sbjct: 61 LDALIKIKDEIDSTLTFRRSCREGICGSCATPSN 94 >gi|87302587|ref|ZP_01085404.1| succinate dehydrogenase [Synechococcus sp. WH 5701] gi|87282931|gb|EAQ74888.1| succinate dehydrogenase [Synechococcus sp. WH 5701] Length = 248 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 79/243 (32%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R + Y + + +L+ L + ++ + + CREGI Sbjct: 10 TLRIWRQR-QAEPRGGFLNYRLSGLSPDLSLLEALDRLNQELLLEGERPVYFDHDCREGI 68 Query: 85 CGSCGMNIDGTNTLA--------CVKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG I+G + + P +I+DL VD S Sbjct: 69 CGSCGFLINGQAHGPRSGTTVCQLYLREFSDGQVLTLEPWRARAFPLIQDLAVDRSALDQ 128 Query: 135 Q-HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + S A L E + C+ C C +CP+ + L Sbjct: 129 LLMAGGYVSVNIGSAPEANVLPVGRELAAQAFEAASCIGCGACVAACPNASAS----LFV 184 Query: 194 AILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E R+ D C + C+ CPK + P+ I+++ Sbjct: 185 AAKLTHLELLPQGQPEASQRSRRMREQMDAQGFGVCGNQLECSAVCPKEI-PSSLISRMN 243 Query: 252 MML 254 Sbjct: 244 RQA 246 >gi|282854103|ref|ZP_06263440.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J139] gi|282583556|gb|EFB88936.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes J139] Length = 252 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 76/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R N + + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQN-GPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFMVNGKPHGPLPNTPACRQHLRAFPRITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLIQGGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLV-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|184200397|ref|YP_001854604.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Kocuria rhizophila DC2201] gi|183580627|dbj|BAG29098.1| succinate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] Length = 249 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 83/246 (33%), Gaps = 24/246 (9%) Query: 29 EYRIYRWNPDNKGNP-CMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +++R ++ + Y + +L+ L + + + + + CREG Sbjct: 4 TLKVWRQ--ESGAEGGHFEEYPLQDVGPEFSLLEALDKLNDDLVARGEDPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG+CG+ +DG +C + ++ + V P V+KDL VD S Sbjct: 62 ICGACGVTVDGRPHGPQEKTPSCRQHLRSFEDGATVQLEPFRSGAFPVVKDLAVDRSALD 121 Query: 134 SQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + A + +HE + L C+ C C +CP N L Sbjct: 122 RVIEAGGFVSTSVGTAPDADAIPVTHESAEWALDLAACIGCGACVAACP----NGSAQLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L S+ E C C + CP G+ AIA + Sbjct: 178 AGSKTMHLATLPSSQKERSRRAKGITRAAEEEFGPCSVYGECAEVCPAGIPLT-AIAGLN 236 Query: 252 MMLLDR 257 L + Sbjct: 237 REKLRQ 242 >gi|229491910|ref|ZP_04385731.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis SK121] gi|229321591|gb|EEN87391.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis SK121] Length = 249 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 24/246 (9%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 ++R + P++ G DTY +D +L+ L + +++ + + CRE Sbjct: 3 ITVDVWRQSGPESSGA--FDTYQIDDATVEMSLLELLDRLNDQLVESGNEPIAFDSDCRE 60 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHF 132 GICGSCG+ +D C + ++ + P V++DLVVD S Sbjct: 61 GICGSCGITVDNVPHGPVANTPTCRQHLRSFSDGDRIKLEPFRSAAFPVVRDLVVDRSAL 120 Query: 133 YSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + + A SH+ + C+ C C +CP N +L Sbjct: 121 DRVLEAGGYVSVNAGTAPDADSQPLSHQSAEAALDFAACIGCGACVAACP----NGAAHL 176 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L + R+E C T C Q CP + AIA + Sbjct: 177 FTGSKLTHLSLVTQGRNERGKRARAMSHQMEADFGPCSTYGECAQVCPAEIPLT-AIAAV 235 Query: 251 KMMLLD 256 + Sbjct: 236 NKESMR 241 >gi|297618897|ref|YP_003707002.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus voltae A3] gi|297377874|gb|ADI36029.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Methanococcus voltae A3] Length = 540 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 25/224 (11%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI 111 + +++ L Y+ N + R SC+ G CGSC + ++G LAC ++ + Sbjct: 27 MVPSDLTIIEALEYLNNN-GFEIKYRSSCKAGQCGSCAVCVNGLPKLACKTKVE---EDM 82 Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--- 168 + PL + +I+DL+V+ +Y + E W+ S + K + + L Sbjct: 83 KIEPLRNFEIIEDLIVNRDEYYKAQKEFENWIHKKSDENTKSDENDEKTGDNLKLLSDED 142 Query: 169 ------------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 C+ C C ++CP+ Y GP + R+ D+RD +R+ Sbjct: 143 LFSTISDIGEVRNCIDCMSCMSTCPAR--MYSDYTGPTFMRLLARYARDARD--NKDRVK 198 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLN-PAKAIAKIKMMLLDRKI 259 LY C T C + CP ++ A+ K++ + + + Sbjct: 199 EAF-ENNLYNCTTCGRCVKVCPNSIDTVHNAVEKLRELSFKKGL 241 >gi|167947107|ref|ZP_02534181.1| succinate dehydrogenase iron-sulfur subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 176 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 4/165 (2%) Query: 93 DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 +GT AC + +++ I + PL V++DL+VD S + + ++ W+ P Sbjct: 1 NGTPRQACSALVDELEQPIRLQPLSKFPVVRDLLVDRSRIFDSLKQVKAWVPLDGPYDIH 60 Query: 153 E--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 E S + C+ C CC +CP Y S +LGPA L+Q + Sbjct: 61 ERAPRISPQQWLNSYAYSRCMSCGCCLEACPQYGEQS-AFLGPAALVQVQHKNRHPTGRY 119 Query: 211 QG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ERL + L C C CPK + AI ++ L Sbjct: 120 SKTERLHVIMGDGGLSDCGNAQVCLSVCPKRIPITTAIGELGRDL 164 >gi|78187922|ref|YP_375965.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chlorobium luteolum DSM 273] gi|78167824|gb|ABB24922.1| succinate dehydrogenase subunit B [Chlorobium luteolum DSM 273] Length = 258 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 81/259 (31%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW E + Y++ +PD+ +D L G Sbjct: 6 RIWRQENAEAKGGMVTYKVSGISPDSSFFEMLDILNQQLIEDGQ--------------EP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 ++ CREGICG+C + I+G C M+ K + P V++ Sbjct: 52 VSFDHDCREGICGTCSLYINGRPHGPVKGVTTCQLHMRSFKDGDTITIEPWRAKAFPVVR 111 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCSTSCPS 182 DL+VD S ++ P + ++R C+ C C + Sbjct: 112 DLIVDRSALDRIIQAGGYVSINTGGVPDANSIPVPKERSDDAFDAAACIGCGACVAA--- 168 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + L E + + + D C C CPKG Sbjct: 169 -CANAAAMLFIGAKVSHLALLPQGEIEAERRVMKMVECMDGLGFGGCSNTYACEAECPKG 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ IA + L + Sbjct: 228 ISVTN-IAILNRGFLTATL 245 >gi|312891612|ref|ZP_07751124.1| succinate dehydrogenase subunit B [Mucilaginibacter paludis DSM 18603] gi|311295894|gb|EFQ73051.1| succinate dehydrogenase subunit B [Mucilaginibacter paludis DSM 18603] Length = 248 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 23/239 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 +I+R + ++ M Y V+ L+ L + + + + CREGIC Sbjct: 5 LKIWRQD-NHDAAGAMVDYEVNDVTAQMSFLEMLDLLNQSLIQKGERVIEFDHDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQ 135 G CGM I+G C M+ K ++ P +++DL +D F Sbjct: 64 GQCGMMINGRAHGPITQTTTCQLHMRSFKDGETIFIEPFRAQAFPIVRDLKIDRKAFDHI 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +S A +L SH+ + C+ C C +C NS L + Sbjct: 124 IQSGGFISTSNGEAAEANGILISHKIAEAAFDAAACIGCGACVATCK----NSSASLFTS 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L + E + + D C C CP+G++ IA++ Sbjct: 180 AKITHLALLPQGQIEAAERVIKMVDQMDAEGFGHCSNTEACEVECPQGISVL-HIARMN 237 >gi|81300342|ref|YP_400550.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Synechococcus elongatus PCC 7942] gi|81169223|gb|ABB57563.1| succinate dehydrogenase subunit B [Synechococcus elongatus PCC 7942] Length = 279 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 94/243 (38%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++I+R + TY + + +L+ L + ++ + + CREGI Sbjct: 35 KFKIWRQ-ASAQATGQFKTYALQQASADLSLLEALDSLNEQLITQGEDPIAFDHDCREGI 93 Query: 85 CGSCGMNIDGTNTLA------CVKDMKDIKGA--IAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG ++G C ++ + + + P ++KDLVVD S Sbjct: 94 CGSCGFLVNGQAHGPLAGTSVCQLYLRHFQSGDCLTLEPWRAQAFPLVKDLVVDRSALDR 153 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T + A +L S + + C+ C C +C + + L Sbjct: 154 IIQAGGYCSVNTGNAPEANAILISQAEAAQAFDAAVCIGCGACVAACKNASAS----LFT 209 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E L+ + + C +++ C CPK ++ A I++++ Sbjct: 210 AAKLAHLSLLPQGQPERSQRVLNLVTQMEAEGFGSCSSLLECQAVCPKEIS-ADWISRMQ 268 Query: 252 MML 254 Sbjct: 269 RQY 271 >gi|56752528|ref|YP_173229.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Synechococcus elongatus PCC 6301] gi|56687487|dbj|BAD80709.1| succinate dehydrogenase iron-sulfur protein [Synechococcus elongatus PCC 6301] Length = 253 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 94/243 (38%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++I+R + TY + + +L+ L + ++ + + CREGI Sbjct: 9 KFKIWRQ-ASAQATGQFKTYALQQASADLSLLEALDSLNEQLITQGEDPIAFDHDCREGI 67 Query: 85 CGSCGMNIDGTNTLA------CVKDMKDIKGA--IAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG ++G C ++ + + + P ++KDLVVD S Sbjct: 68 CGSCGFLVNGQAHGPLAGTSVCQLYLRHFQSGDCLTLEPWRAQAFPLVKDLVVDRSALDR 127 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + T + A +L S + + C+ C C +C + + L Sbjct: 128 IIQAGGYCSVNTGNAPEANAILISQAEAAQAFDAAVCIGCGACVAACKNASAS----LFT 183 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E L+ + + C +++ C CPK ++ A I++++ Sbjct: 184 AAKLAHLSLLPQGQPERSQRVLNLVTQMEAEGFGSCSSLLECQAVCPKEIS-ADWISRMQ 242 Query: 252 MML 254 Sbjct: 243 RQY 245 >gi|314918340|gb|EFS82171.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Propionibacterium acnes HL050PA1] Length = 252 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 76/242 (31%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPTLTLRRSCREG 83 E I+R N + V+ +L+ L I + CREG Sbjct: 3 VELDIWRQN-GPDAKGHFEHDVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKG--AIAVYPLP--HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ + P VI+DL +D + Sbjct: 62 VCGCCGFMVNGKPHGPLPNTPACRQHLRAFPHITHFKIEPFRSAAFPVIRDLAIDRTSMD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ A + Q H + ++ C+ C C +CP N L Sbjct: 122 HLIQAGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACP----NGAAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + C C ++CP + A+A++ Sbjct: 178 AGAKLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLV-AVARVN 236 Query: 252 MM 253 Sbjct: 237 RE 238 >gi|297788854|ref|XP_002862463.1| hypothetical protein ARALYDRAFT_920689 [Arabidopsis lyrata subsp. lyrata] gi|297307993|gb|EFH38721.1| hypothetical protein ARALYDRAFT_920689 [Arabidopsis lyrata subsp. lyrata] Length = 130 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 66/110 (60%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PK +E QS +DR+K+DGLYEC++CACC+TSCPSYWWN + + GPA LLQAYRW+ Sbjct: 8 RKPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWIS 67 Query: 205 DSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 DSRDEF ERL + E+ ++YRC I NCT +CPKGLNPA AI K+K Sbjct: 68 DSRDEFGEERLQAITENQTKVYRCRAIKNCTATCPKGLNPASAILKMKSK 117 >gi|124021883|ref|YP_001016190.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prochlorococcus marinus str. MIT 9303] gi|123962169|gb|ABM76925.1| succinate dehydrogenase/fumarate reductase, iron-sulfur binding [Prochlorococcus marinus str. MIT 9303] Length = 245 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R + + Y ++ + +L+ L + ++ ++ CREGI Sbjct: 8 TLRIWRQ-ASSNSSGAFHVYRLEQISADLSLLEALDRLNEQLIAQAKRPVSFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CGSCG ++G C ++ + P +I+DLVVD S F Sbjct: 67 CGSCGFLVNGQAHGPQTGTTVCQLYLRQFADGDTLTLEPWRARAFPLIQDLVVDRSAFDR 126 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T LL + C+ C C SC + + L Sbjct: 127 LIAAGGYCSVNTGQAPDGNALLIGKDQVASAFETATCIGCGACVASCRNASAS----LFV 182 Query: 194 AILLQAYRWLIDSRDE--FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + + + +RL L C + + C CPK ++ A I+ + Sbjct: 183 AAKLAHLGQLPQGQSDSKRRAKRLQELMSEEGFGSCSSNLECEAVCPKQIS-ADWISWMH 241 Query: 252 MML 254 Sbjct: 242 REA 244 >gi|296118459|ref|ZP_06837038.1| fumarate reductase, iron-sulfur protein [Corynebacterium ammoniagenes DSM 20306] gi|295968600|gb|EFG81846.1| fumarate reductase, iron-sulfur protein [Corynebacterium ammoniagenes DSM 20306] Length = 249 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 85/243 (34%), Gaps = 23/243 (9%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 +I+R P + GN +T VD +L+ L ++ ++ + CREG Sbjct: 4 TLKIWRQAGPTHDGN--FETVQVDDAEEQMSILELLDHVNDQFIERGEEPFAFASDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG+CG+ ++G AC + + V P VIKD+VVD Sbjct: 62 ICGTCGLTVNGRPHGPGQNTPACQQRLFQFTDGDTVTLEPFRSAAYPVIKDMVVDRRALD 121 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + A L Q+HE + C+ C C +CP N +L Sbjct: 122 QVMEQGGYVSMDAGTAPDADTLHQNHETAELALDHAACIGCGACVAACP----NGAAHLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + +DE + ++D C C CP G+ A + Sbjct: 178 TGAKLVHLSLMPLGQDERGRRARNMVDDLETNFGHCSLYGECADVCPAGIPLTAVSAVTR 237 Query: 252 MML 254 Sbjct: 238 ERA 240 >gi|329944152|ref|ZP_08292411.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328530882|gb|EGF57738.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 251 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 88/249 (35%), Gaps = 24/249 (9%) Query: 28 KEYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCRE 82 E I+R + P +++ V+ +L+ L + ++I + CRE Sbjct: 3 VELEIWRQDGPQ--AQGFFESHVVEDAEPQMSLLELLDRLNDQIIEAGGEPVVFESDCRE 60 Query: 83 GICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHF 132 G+CG+CG ++G AC + ++ G P +VI+DL VD + Sbjct: 61 GVCGACGFLVNGVPHGPLDTTPACRQHLRAFPGVTRFRLEPWRSAAFAVIRDLAVDRTAL 120 Query: 133 YSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 R A ++ Q H ++ C+ C C +CP N L Sbjct: 121 DELIRVGGTVDVAAGTAPDADDVAQGHLQAERALDFAACIGCGACVAACP----NGAAAL 176 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKI 250 L + R E + L+ C C +CP G+ +AIA + Sbjct: 177 FAGAKLANLSLMPAGRIERGRRARAMTRELDELFGPCSVYGECVPACPAGIPI-EAIALL 235 Query: 251 KMMLLDRKI 259 +L + Sbjct: 236 NREVLRAGL 244 >gi|33862406|ref|NP_893966.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prochlorococcus marinus str. MIT 9313] gi|33640519|emb|CAE20308.1| succinate dehydrogenase/fumarate reductase, iron-sulfur binding [Prochlorococcus marinus str. MIT 9313] Length = 245 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 23/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + RI+R + + Y+++ + +L+ L + ++ ++ CREGI Sbjct: 8 KLRIWRQ-ASSNSSGAFHVYWLEQISADMSLLEALDRLNEQLIAQAKRPVSFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CGSCG ++G C ++ + P I+DLVVD + F Sbjct: 67 CGSCGFLVNGQAHGPQTGTTLCQLYLRQFADGDTLTLEPWRARAFPFIQDLVVDRAAFDR 126 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + T +LL + C+ C C SC + + L Sbjct: 127 LIAAGGYCSVNTGQAPDGNDLLIGKDQAASSFETATCIGCGACVASCRNASAS----LFV 182 Query: 194 AILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E + +RL C + + C CPK ++ A I+ + Sbjct: 183 AAKLAHLAQLPQGQPERNRRAKRLQERMSEEGFGSCSSNLECEAVCPKQIS-ADWISWMH 241 Query: 252 MML 254 Sbjct: 242 REA 244 >gi|33240150|ref|NP_875092.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237677|gb|AAP99744.1| Succinate dehydrogenase iron-sulphur protein subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 246 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 24/243 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 + RI+R + D Y ++ + +L+ L + K+ + + CREGI Sbjct: 8 KLRIWRQDSQAD-KGKFDEYVLENLSIDLSILEMLDQLNEKLILNGERPINFEHDCREGI 66 Query: 85 CGSCGMNIDGT---NTLAC-----VKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG I+G A + + P +I+DLVVD S F Sbjct: 67 CGSCGFLINGQAHGPNTATTICQLYLRHFKDNQTLTLEPWRAKAFQIIQDLVVDRSPFDR 126 Query: 135 QHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 S V P L S E+ C+ C C SC + + L Sbjct: 127 VIASGGYCSVDTAVPPPDGNAFLVSQEEAFSAFQTATCIGCGACVASCKNASAS----LF 182 Query: 193 PAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A + L + + + + + C + C CPK ++ A I+ + Sbjct: 183 VAAKIAHLGQLPQGQLDRSLRTKNMQKQMIQEGFGSCSNNLECEAVCPKEIS-ASWISWM 241 Query: 251 KMM 253 Sbjct: 242 NRE 244 >gi|114589581|ref|XP_001149755.1| PREDICTED: similar to Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Pan troglodytes] Length = 120 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 57/86 (66%), Positives = 69/86 (80%) Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CACCS +CPSYWWN D+YLGPA+L+QAY W+IDSR++F E L L+DP LY CHTIMN Sbjct: 29 CACCSNTCPSYWWNRDKYLGPAVLIQAYHWMIDSREDFTEEYLAKLQDPLSLYHCHTIMN 88 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP GLNP KA A+IK ML+ K Sbjct: 89 CTRTCPTGLNPGKATAEIKKMLVTYK 114 >gi|223939892|ref|ZP_03631761.1| succinate dehydrogenase/fumarate reductase subunit B [bacterium Ellin514] gi|223891484|gb|EEF57976.1| succinate dehydrogenase/fumarate reductase subunit B [bacterium Ellin514] Length = 256 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 76/253 (30%), Gaps = 32/253 (12%) Query: 16 KIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 ++W + +Y +PD +D L G + Sbjct: 6 RVWRQKNASDAGKMVDYPATNVSPDMSFLEMLDVVNEGLIAKG--------------EEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C + I+G AC M+ + + P V++ Sbjct: 52 IAFDSDCREGICGTCSLVINGIAHGGQRGTTACQLHMRYFQDGQTITVEPWRARAFPVVR 111 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DLV D S F +S P L + + + + Sbjct: 112 DLVTDRSPFDRIIQSGGFVSVNTGGTPDANCLPVPKVDADVAMDAAACIACGACV---AA 168 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGL 241 N+ L + + L + E L+ + D C +C CPK + Sbjct: 169 CKNASAMLFVSAKVSHLSTLPQGKTEKNQRVLNMVKQMDKEGFGNCTVTGSCEAVCPKEI 228 Query: 242 NPAKAIAKIKMML 254 + IA++ Sbjct: 229 SI-NFIARMNKEY 240 >gi|145628267|ref|ZP_01784068.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 22.1-21] gi|144980042|gb|EDJ89701.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 22.1-21] Length = 174 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R+NP+ P + TY V DN +LD L YIK+K++P+L+ R SCR ICG Sbjct: 6 VMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICG 64 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SCGM ++ LAC ++D G + + PL + + +DLVVD+SHF +I+P++ Sbjct: 65 SCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGN 124 Query: 147 SPKPAKELLQSHEDRQ------------KIDGLYECVMCAC 175 ++ Q K C+ C Sbjct: 125 EAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGF 165 >gi|284040132|ref|YP_003390062.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirosoma linguale DSM 74] gi|283819425|gb|ADB41263.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirosoma linguale DSM 74] Length = 246 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 81/258 (31%), Gaps = 32/258 (12%) Query: 16 KIWNAPTGE--KNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 K+W L EY++ +PD D +L + G + Sbjct: 6 KVWRQKNTSTPGKLVEYKLANIDPDMSFLEMFDILNGELTHKGEQI-------------- 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLA------CVKDMKDIKGAIAVYPLP----HMSVIK 123 + CREGICGSC M ++G C M+ + P VIK Sbjct: 52 IAFDHDCREGICGSCAMYVNGRAHGPQTGAAVCQLYMRSFNDGDTIIVEPWRSRGFPVIK 111 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL D S F ++ P + + Q+ + + Sbjct: 112 DLSTDRSAFDRIVQAGGYISVNTGAAPEANEILVSHEIQETTMDAAACIACGACV---AA 168 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQ--GERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N+ L + + + L + E + ER+ D C C CP + Sbjct: 169 CKNASAMLFVSAQVSRFALLPQGQSERRTRAERMVAQMDSEGFGACSFTGACAVECPASV 228 Query: 242 NPAKAIAKIKMMLLDRKI 259 + + IA++ L KI Sbjct: 229 SL-ENIARLNREYLGAKI 245 >gi|326772197|ref|ZP_08231482.1| fumarate reductase, iron-sulfur protein [Actinomyces viscosus C505] gi|326638330|gb|EGE39231.1| fumarate reductase, iron-sulfur protein [Actinomyces viscosus C505] Length = 251 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 89/248 (35%), Gaps = 22/248 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 E I+R + + +++ V+ +L+ L + ++I + CREG Sbjct: 3 IELEIWRQD-GPRARGFFESHVVEDAEPQMSLLELLDRLNDQIIEDGGEPVVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 +CG+CG ++G AC + ++ G P VI+DLVVD + Sbjct: 62 VCGACGFLVNGVPHGPLDTTPACRQHLRAFPGVTRFRLEPWRSAAFPVIRDLVVDRTALD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R+ A ++ Q H ++ C+ C C +CP N L Sbjct: 122 ELIRAGGTVDVAAGTAPDADDVAQGHLQAERALDFAACIGCGACVAACP----NGAAALF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + L+ C C +CP G+ +AIA + Sbjct: 178 AGAKLAHLSLMPQGRIERGRRARAMTRELDALFGPCSEFGECLPACPAGIPI-EAIALLN 236 Query: 252 MMLLDRKI 259 +L + Sbjct: 237 REVLRAGL 244 >gi|295102691|emb|CBL00236.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Faecalibacterium prausnitzii L2-6] Length = 233 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 20/240 (8%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVD--LDNCGPMVLDGLLY------IKNKIDPTLTLRRS 79 RI R NP PC + + D VL+ L + + + Sbjct: 4 TIRIKRQENPQAS--PCWQEFSFEGSADTSIASVLNELNHRSPLCEKSGTVVSPIAWECG 61 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C CG+C M I+G LAC ++D KG++ + PL ++KDLVVD S + + Sbjct: 62 CMIRKCGACAMRINGLPRLACSVFLRDCKGSVVTLEPLSKFPLVKDLVVDRSVIFEALKR 121 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + WL+ + + + + +C++C CC CP++ + + G + + Sbjct: 122 TKLWLEGDAFQTSYTH-------SQRYRSAKCLLCGCCLEVCPNFD-PNSEFAGAVLPVN 173 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR L + +D L N C + C CP G+ + +++ + ++ Sbjct: 174 AYRILNEEQDIAHQTELANAYRQLYFEGCGKSLACQDICPAGIPVEELMSRFNAAAVWKR 233 >gi|324535033|gb|ADY49401.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 132 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 2/111 (1%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 G AP K++K + IYR+NP+ P M Y VDL CG MVLD L+ IKN IDPT Sbjct: 22 GATMAAPAKMKHIKTFEIYRFNPEEPGSKPRMQKYDVDLSKCGNMVLDALIKIKNDIDPT 81 Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA-IAVYPLPHMSVIK 123 LT RRSCREGICGSC MNI G NTLAC+ ++++ KG + +YPLPHM VI+ Sbjct: 82 LTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPLPHMFVIR 132 >gi|257063126|ref|YP_003142798.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Slackia heliotrinireducens DSM 20476] gi|256790779|gb|ACV21449.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Slackia heliotrinireducens DSM 20476] Length = 230 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 17/235 (7%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID---------PTLTLRR 78 R+ R P P +++ +D+ + V L I D + Sbjct: 2 NVRVLRQLGPGTP--PYWESFDMDV-SGDMTVAALLDRINTSNDVVDDQGNPITNIGWEC 58 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 SC +G+CG C M ++G LAC ++D I + PL VI DLVVD + + + Sbjct: 59 SCLQGVCGGCAMVVNGEPVLACEVHLRDLKGSGIEIRPLRKFPVIHDLVVDRTSIHENLK 118 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++++ P A ++ +DRQ + +C+ C C CP+Y + + + G L Sbjct: 119 RSNVYIESYDPGDATRRAKAAQDRQHQYDIGKCLKCGLCLEVCPNY-TSGEHFFG--ALF 175 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +++ SR++ + + L D C ++C CP G+ ++A++ Sbjct: 176 ANDCYMVASRNKAKAGEMQALYDRHFGRDCSKSLSCMDVCPAGIATIASMARMNR 230 >gi|213966032|ref|ZP_03394221.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium amycolatum SK46] gi|213951327|gb|EEB62720.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium amycolatum SK46] Length = 249 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 21/231 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R ++ VD +L+ L ++ +K CREGIC Sbjct: 5 LEIWRQ-AGPNVEGHFESVDVDDAVAEMSILELLDHVNSKYVESGKEPFAFASDCREGIC 63 Query: 86 GSCGMNIDGTNTLACV--------KDMKDIKGAIAVYPLP--HMSVIKDLVVDMSHFYSQ 135 G+CG+N++G + + + P+ VIKD+VVD S Sbjct: 64 GTCGLNVNGRPHGPGQNTPTCQQRLHQFNDGDTLKIEPMRSAAYPVIKDMVVDRSALDRV 123 Query: 136 HRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 P + L +HE + C+ C C +CP N +L Sbjct: 124 LEQGGYVSINAGTAPDADTLHLNHETAEFALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA 244 L + ++E +++ C C CP G+ Sbjct: 180 AKLVHLSLVPLGKEERGKRARKMVDEVEGTFGPCSLYGECADVCPAGIPLT 230 >gi|295103202|emb|CBL00746.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Faecalibacterium prausnitzii SL3/3] Length = 233 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 20/240 (8%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVD--LDNCGPMVLDGLLY------IKNKIDPTLTLRRS 79 RI R NP PC + + D VL+ L + + + Sbjct: 4 TIRIKRQENPQAS--PCWQEFSFEGSADTSIASVLNELNHRSPLCEKSGTVVSPIAWECG 61 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C CG+C M I+G LAC ++D KG++ + PL ++KDLVVD S + + Sbjct: 62 CMIRKCGACAMRINGLPRLACSVFLRDCKGSVVTLEPLSKFPLVKDLVVDRSVIFEALKR 121 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + WL+ + + + + +C++C CC CP++ + + G + + Sbjct: 122 TKLWLEGDAFQTSYTH-------SQRYRSAKCLLCGCCLEVCPNFD-PNSEFAGAVLPVN 173 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR L + +D L N C + C CP G+ + +++ + ++ Sbjct: 174 AYRILNEEQDIAHQTELANAYRQLYFEGCGKSLACQDICPAGIPVEELMSRSNAAAVWKR 233 >gi|19551618|ref|NP_599620.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glutamicum ATCC 13032] gi|62389270|ref|YP_224672.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glutamicum ATCC 13032] gi|41324604|emb|CAF19086.1| succinate dehydrogenase B [Corynebacterium glutamicum ATCC 13032] Length = 249 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 78/248 (31%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGI 84 I+R +T VD +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTAEGKFETVQVDDAVAQMSILELLDHVNNKFIEEGKEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G A + + PL VIKD+VVD S Sbjct: 63 CGTCGLLVNGRPHGADQNKPACAQRLVSYKEGDTLKIEPLRSAAYPVIKDMVVDRSALDR 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 P + L +HE + C+ C C +CP N +L Sbjct: 123 VMEQGGYVTINAGTAPDADTLHVNHETAELALDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA--KAIAKI 250 L L ++E +++ C C CP G+ A+ K Sbjct: 179 GAKLVHLSLLPLGKEERGLRARKMVDEMETNFGHCSLYGECADVCPAGIPLTAVAAVTKE 238 Query: 251 KMMLLDRK 258 + R Sbjct: 239 RARAAFRG 246 >gi|68537021|ref|YP_251726.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium jeikeium K411] gi|260579366|ref|ZP_05847248.1| fumarate reductase, iron-sulfur protein [Corynebacterium jeikeium ATCC 43734] gi|68264620|emb|CAI38108.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium jeikeium K411] gi|258602495|gb|EEW15790.1| fumarate reductase, iron-sulfur protein [Corynebacterium jeikeium ATCC 43734] Length = 249 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 80/247 (32%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R ++ VD +L+ L ++ N+ CREGIC Sbjct: 5 LEIWRQ-AGPNAEGHFESVDVDDAAEQMSILELLDHVNNQYVEDGKEPFAFASDCREGIC 63 Query: 86 GSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++ + I + PL VIKD+VVD S Sbjct: 64 GTCGLMVNDRPHGPDKNKPACQQRLLSFNDGDTIKLEPLRSAAYPVIKDMVVDRSALDRV 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + A LL +H D +K C+ C C +CP N +L Sbjct: 124 MEKGGFVSVMAGTAPDADSLLVNHSDAEKALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA--KAIAKIK 251 L R+E +++ C C CP G+ AI K + Sbjct: 180 AKLVHLTLSPLGREERGKRARKMVDEVEGTFGPCSLYGECADVCPAGIPLTAVAAITKER 239 Query: 252 MMLLDRK 258 R Sbjct: 240 TRAAFRG 246 >gi|227502502|ref|ZP_03932551.1| succinate dehydrogenase [Corynebacterium accolens ATCC 49725] gi|306835076|ref|ZP_07468119.1| fumarate reductase subunit B [Corynebacterium accolens ATCC 49726] gi|227076775|gb|EEI14738.1| succinate dehydrogenase [Corynebacterium accolens ATCC 49725] gi|304569057|gb|EFM44579.1| fumarate reductase subunit B [Corynebacterium accolens ATCC 49726] Length = 249 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 79/242 (32%), Gaps = 21/242 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R +T VD + +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTQEGKFETVQVDDASEQMSILELLDHVNEGYVERGEEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G AC + + + + P VIKD+VVD S Sbjct: 63 CGTCGLTVNGRPHGPGQNTPACQQRLFNFNDGDTIQLEPFRSAAYPVIKDMVVDRSALDH 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + A + +HE + C+ C C +CP N +L Sbjct: 123 VMEQGGYVSMDAGTAPDADTMHINHETAEYSLDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + ++E + + D C C CP G+ A + Sbjct: 179 GAKLVHLSMMPLGKEERGSRARNMVADLESNFGHCSLYGECADVCPAGVPLTAVSAVTRE 238 Query: 253 ML 254 Sbjct: 239 RA 240 >gi|300857660|ref|YP_003782643.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium pseudotuberculosis FRC41] gi|300685114|gb|ADK28036.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium pseudotuberculosis FRC41] gi|302205399|gb|ADL09741.1| Fumarate reductase iron-sulfur subunit [Corynebacterium pseudotuberculosis C231] gi|302329953|gb|ADL20147.1| Fumarate reductase iron-sulfur subunit [Corynebacterium pseudotuberculosis 1002] gi|308275637|gb|ADO25536.1| Fumarate reductase iron-sulfur subunit [Corynebacterium pseudotuberculosis I19] Length = 249 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGIC 85 I+R ++ V+ +L+ L ++ + CREGIC Sbjct: 5 LEIWRQ-AGPHSEGHFESIDVEDAVAQMSILELLDHVNTGLVEEGKEPFVFASDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++G +C + + + + P VIKDL VD S Sbjct: 64 GTCGLLVNGRPHGLDKNKPSCQQRLDHVADGSTLKIEPFRSAAYPVIKDLAVDRSALDRV 123 Query: 136 H-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + A + Q+HE + C+ C C +CP N +L Sbjct: 124 MQKGGYVSINAGTAPDADTIYQNHEKAELALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNP--AKAIAKIK 251 L + R+E + +++ C C CP G+ AI K + Sbjct: 180 AKLVHLALMPLGREERGKRARNMIDELETNFGHCSLYGECADVCPAGIPLSAVAAINKER 239 Query: 252 MMLLDRK 258 R Sbjct: 240 ARAFFRG 246 >gi|21323137|dbj|BAB97765.1| Succinate dehydrogenase/fumarate reductase Fe-S protein [Corynebacterium glutamicum ATCC 13032] Length = 279 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 84/260 (32%), Gaps = 27/260 (10%) Query: 21 PTGEKNLK----EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDP 72 PT +K L+ I+R +T VD +L+ L ++ + Sbjct: 22 PTADKELQVMKLTLEIWRQ-AGPTAEGKFETVQVDDAVAQMSILELLDHVNNKFIEEGKE 80 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVI 122 CREGICG+CG+ ++G A + + PL VI Sbjct: 81 PFAFASDCREGICGTCGLLVNGRPHGADQNKPACAQRLVSYKEGDTLKIEPLRSAAYPVI 140 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCP 181 KD+VVD S P + L +HE + C+ C C +CP Sbjct: 141 KDMVVDRSALDRVMEQGGYVTINAGTAPDADTLHVNHETAELALDHAACIGCGACVAACP 200 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKG 240 N +L L L ++E +++ C C CP G Sbjct: 201 ----NGAAHLFTGAKLVHLSLLPLGKEERGLRARKMVDEMETNFGHCSLYGECADVCPAG 256 Query: 241 LNPA--KAIAKIKMMLLDRK 258 + A+ K + R Sbjct: 257 IPLTAVAAVTKERARAAFRG 276 >gi|291550580|emb|CBL26842.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ruminococcus torques L2-14] Length = 225 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 83/234 (35%), Gaps = 19/234 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTY--------YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + RI R + D + P + V D L IK K + C Sbjct: 2 KVRIKRQD-DRRSAPYWQIFHFRGEGRVTVAAILEKLNERDQLEDIKGKQCRKIRWECGC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 + +CG C M I+G LAC + I + PL V++DL+VD S + + + Sbjct: 61 MQKMCGGCAMVINGHPALACGVFINTDDTEILRLEPLTKFPVVEDLIVDRSVIWERQKEA 120 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +L ++ + +C+ C C CPSY D + G A Sbjct: 121 LMYLGIRKHPD-------PKEHEHQYSAAKCLKCGLCLEVCPSYLGAKDDFYGAEFANNA 173 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Y L+ S + L+ + +C + C CP L +I+ + Sbjct: 174 Y--LLHSSSLNRKRALEKQYEEHFAKQCSKSLACRDICPAHLQTLSSISYMNRR 225 >gi|227549726|ref|ZP_03979775.1| succinate dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] gi|227078222|gb|EEI16185.1| succinate dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] Length = 249 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 89/249 (35%), Gaps = 25/249 (10%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 I+R PD GN +T VD +L+ L ++ N T CREG Sbjct: 4 TLEIWRQAGPDTDGN--FETVQVDDAVEQMSILELLDHVNNNYVEAGKEPFTFASDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 ICG+CG+ ++G AC++ + + K + P VIKDL VD S Sbjct: 62 ICGTCGVTVNGRPHGAGQNTTACLQRLFNYKDGDTLRIEPFRSGAFPVIKDLAVDRSALD 121 Query: 134 SQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ + A L +HE + C+ C C +CP N +L Sbjct: 122 RVMQQGGYISVQAGTAPDADTLHVNHETAELALDYAACIGCGACVAACP----NGAAHLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNP--AKAIAK 249 L+ + L + E +++ C C CP G+ +I Sbjct: 178 TGAKLKHLKLLPLGKQERGKRARQMVDELETNFGHCSLYGECADVCPAGIPLDAVGSINA 237 Query: 250 IKMMLLDRK 258 + R Sbjct: 238 ERARAAFRG 246 >gi|311741007|ref|ZP_07714832.1| fumarate reductase subunit B [Corynebacterium pseudogenitalium ATCC 33035] gi|311303809|gb|EFQ79887.1| fumarate reductase subunit B [Corynebacterium pseudogenitalium ATCC 33035] Length = 249 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 80/242 (33%), Gaps = 21/242 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R +T VD + +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTQEGHFETVQVDDASEQMSILELLDHVNEGYIERGEEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G AC + + + V P VIKD+VVD + Sbjct: 63 CGTCGLTVNGRPHGPGQNTPACQQRLFNFTDGQTVKLEPFRSAAYPVIKDMVVDRAALDH 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + A + +HE + C+ C C +CP N +L Sbjct: 123 VMEQGGYVSMDAGTAPDADTMHLNHETAEYSLDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + ++E + ++D C C CP G+ A + Sbjct: 179 GAKLVHLSLMPLGKEERGRRARNMVDDLEANFGHCSLYGECADVCPAGVPLTAVSAVTRE 238 Query: 253 ML 254 Sbjct: 239 RA 240 >gi|145220524|ref|YP_001131233.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Prosthecochloris vibrioformis DSM 265] gi|145206688|gb|ABP37731.1| succinate dehydrogenase subunit B [Chlorobium phaeovibrioides DSM 265] Length = 257 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 82/259 (31%), Gaps = 34/259 (13%) Query: 16 KIWNAPTGEKN--LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPT 73 +IW E + Y + + D+ +DT L + G Sbjct: 6 RIWRQKNAEAKGGMVSYSVSGVSADSSFFEMLDTLNQQLVDEG--------------AEP 51 Query: 74 LTLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIK 123 + CREGICG+C + I+G C M+ + P +++ Sbjct: 52 VCFDHDCREGICGTCSLYINGRPHGPVKGVTTCQLHMRSFADGETISIEPWRAKAFPIVR 111 Query: 124 DLVVDMSHFYSQHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 DL+VD S +++ + + A + D C+ C C + Sbjct: 112 DLIVDRSALDRINQAGGYVSVNSGGVPDANSIPVRKADSDAAFDAAACIGCGACVAA--- 168 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKG 240 N+ L + L + E + L + D C C CPKG Sbjct: 169 -CANAAAMLFVGAKVSHLALLPQGKIEARERVLKMVECMDGLGFGGCSNTYACEAECPKG 227 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ A IA + L I Sbjct: 228 ISVAN-IAMMNREFLSSAI 245 >gi|145294490|ref|YP_001137311.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glutamicum R] gi|140844410|dbj|BAF53409.1| hypothetical protein [Corynebacterium glutamicum R] Length = 249 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 78/248 (31%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGI 84 I+R +T VD +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTAEGKFETVRVDDAVAQMSILELLDHVNNKFIEEGKEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G A + + PL VIKD+VVD S Sbjct: 63 CGTCGLLVNGRPHGADQNKPACAQRLVSYKEGDTLKIEPLRSAAYPVIKDMVVDRSALDR 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 P + L +HE + C+ C C +CP N +L Sbjct: 123 VMEQGGYVTINAGTAPDADTLHVNHETAELALDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA--KAIAKI 250 L L ++E +++ C C CP G+ A+ K Sbjct: 179 GAKLVHLSLLPLGKEERGLRARKMVDEMETNFGHCSLYGECADVCPAGIPLTAVAAVTKE 238 Query: 251 KMMLLDRK 258 + R Sbjct: 239 RARAAFRG 246 >gi|255324221|ref|ZP_05365343.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium tuberculostearicum SK141] gi|255298737|gb|EET78032.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium tuberculostearicum SK141] Length = 249 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 80/242 (33%), Gaps = 21/242 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R +T VD + +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTQEGHFETVQVDDASEQMSILELLDHVNEGYIERGEEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G AC + + + + P VIKD++VD + Sbjct: 63 CGTCGLTVNGRPHGPGQNTPACQQRLFNFTDGQTIKLEPFRSAAYPVIKDMIVDRAALDH 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + A + +HE + C+ C C +CP N +L Sbjct: 123 VMEQGGYVSMDAGTAPDADTMHINHETSEYSLDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + ++E + ++D C C CP G+ A + Sbjct: 179 GAKLVHLSLMPLGKEERGRRARNMVDDLEANFGHCSLYGECADVCPAGVPLTAVSAVTRE 238 Query: 253 ML 254 Sbjct: 239 RA 240 >gi|38232988|ref|NP_938755.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium diphtheriae NCTC 13129] gi|38199246|emb|CAE48877.1| Putative succinate dehydrogenase iron-sulfur protein [Corynebacterium diphtheriae] Length = 249 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 78/247 (31%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGIC 85 I+R + V+ VL+ L ++ + CREGIC Sbjct: 5 LEIWRQ-AGPNSEGHFEPIDVNDAVPQMSVLELLDHVNTGLIEEGKEPFVFASDCREGIC 63 Query: 86 GSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++G + + PL V+KDL+VD S Sbjct: 64 GTCGLLVNGRPHGLDKNKPSCQQRLDHVPDGSTLKIEPLRSAAYPVVKDLLVDRSALDRV 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + A L Q+HE + C+ C C +CP N +L Sbjct: 124 LEKGGFVSINAGTAPDADTLHQNHESAELALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNP--AKAIAKIK 251 L + ++E +++ C C CP G+ AI K + Sbjct: 180 AKLIHLSLMPLGKEERGKRARKMVDELETNFGHCSLYGECADVCPAGIPLSAVAAINKER 239 Query: 252 MMLLDRK 258 R Sbjct: 240 ARAFFRG 246 >gi|325067480|ref|ZP_08126153.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Actinomyces oris K20] Length = 251 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 87/248 (35%), Gaps = 22/248 (8%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 E I+R + + +++ V+ +L+ L + ++I + CREG Sbjct: 3 IELEIWRQD-GPRARGFFESHVVEDAEPQMSLLELLDRLNDQIIEAGGEPVVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 +CG+CG ++G AC + ++ G P VI+DLVVD + Sbjct: 62 VCGACGFLVNGVPHGPLDTTPACRQHLRAFPGVTRFRLEPWRSAAFPVIRDLVVDRTALD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 R A + Q + ++ C+ C C +CP N L Sbjct: 122 ELIRVGGTVDVAAGTAPDADGVAQGYLQAERALDFAACIGCGACVAACP----NGAAALF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIK 251 L + R E + L+ C C +CP G+ +AIA + Sbjct: 178 AGAKLAHLSLMPAGRIERGRRARAMTRELDELFGPCSEFGECLPACPAGIPI-EAIALLN 236 Query: 252 MMLLDRKI 259 +L + Sbjct: 237 REVLRAGL 244 >gi|207092408|ref|ZP_03240195.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori HPKX_438_AG0C1] Length = 166 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 5/150 (3%) Query: 111 IAVYPLPHMSVIKDLVVDM-SHFYSQHRSIEPWLKTVSPKPAKEL--LQSHEDRQKIDGL 167 I + P+P ++IKDL V+ F + +E W + + ++ Q++ L Sbjct: 13 ITLMPMPSFTLIKDLSVNTGDWFLDMTKRVESWAHSKEEVDITQPEKRIEPDEAQEVFEL 72 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 C+ C CC SC + + ++G A + +A R++IDS DE + + + D ++ Sbjct: 73 DRCIECGCCIASCGTKLMRPN-FIGAAGMNRAMRFMIDSHDERSDDDFYELVGDDDGVFG 131 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C +++ C +CPK L +IA ++ +L Sbjct: 132 CMSLIACHDTCPKELPLQSSIAALRNRMLK 161 >gi|257440675|ref|ZP_05616430.1| succinate dehydrogenase, iron-sulfur protein [Faecalibacterium prausnitzii A2-165] gi|257196848|gb|EEU95132.1| succinate dehydrogenase, iron-sulfur protein [Faecalibacterium prausnitzii A2-165] Length = 233 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVD--LDNCGPMVLDGLLY------IKNKIDPTLTLRRSC 80 RI R + + +PC + + D VL+ L + + + C Sbjct: 4 TIRIKRQE-NQQASPCWQEFSFEGSADTSIASVLNELNHRSPLCEKSGTVVSPIAWECGC 62 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+G LAC ++D KG++ + PL ++KDLVVD S + + Sbjct: 63 MIRKCGACAMRINGLPRLACSVFLRDCKGSVVTLEPLSKFPLVKDLVVDRSVIFEALKRT 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + WL+ + + + + +C++C CC CP++ + + G + + A Sbjct: 123 KLWLEGDAFQTSYTH-------SQRYQSAKCLLCGCCLEVCPNFD-PNSEFAGAVLPVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 YR L + +D L N C + C CP G+ + +++ + ++ Sbjct: 175 YRILNEEQDIAHQTELANAYRQLYFEGCGKSLACQDICPAGIPVEELMSRSNAAAVWKR 233 >gi|313113776|ref|ZP_07799349.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623905|gb|EFQ07287.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 233 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 20/240 (8%) Query: 29 EYRIYRW-NPDNKGNPCMDTYYVD--LDNCGPMVLDGLLY------IKNKIDPTLTLRRS 79 RI R NP PC + + D VL+ L + + + Sbjct: 4 TIRIKRQENPQAS--PCWQEFSFEGSADTSIASVLNELNHRSPLCEKSGTVVSLIAWECG 61 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C CG+C M I+G LAC ++D KG++ + PL ++KDLVVD S + + Sbjct: 62 CMIRKCGACAMRINGLPRLACSVFLRDCKGSVVTLEPLSKFPLVKDLVVDRSVIFEALKR 121 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + WL+ + + + + +C++C CC CP++ + + G + + Sbjct: 122 TKLWLEGDAFQTSYTH-------SQRYRSAKCLLCGCCLEVCPNFD-PNSEFAGAVLPVN 173 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 AYR L + +D L N C + C CP G+ + +++ + ++ Sbjct: 174 AYRILNEEQDIAHRTELANAYRQLYFEGCGKSLACQDICPAGIPVEELMSRSNAAAVWKR 233 >gi|319440735|ref|ZP_07989891.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium variabile DSM 44702] Length = 249 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 78/247 (31%), Gaps = 23/247 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R D ++ V +L+ L ++ + CREGIC Sbjct: 5 LEIWRQ-ADRNAQGHFESVDVPDAVESMSILELLDHVNSSYVEAGKEPFAFASDCREGIC 63 Query: 86 GSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++G A+ + P+ VIKD+VVD S Sbjct: 64 GTCGLLVNGRPHGPDQNKSACQQRLFSYSDGDALKIEPMRSAAYPVIKDMVVDRSALDRV 123 Query: 136 HRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + A LL +H D + C+ C C +CP N +L Sbjct: 124 MEKGGFVSIVAGTAPDADHLLVNHHDAELALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA--KAIAKIK 251 L R E +++ C C CP G+ AI K + Sbjct: 180 AKLVHLTLSPLGRMERGRRAKAMVDEVEGTFGPCSLYGECADVCPAGIPLTAVAAITKER 239 Query: 252 MMLLDRK 258 + Sbjct: 240 ARAAFKG 246 >gi|296114434|ref|ZP_06833088.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter hansenii ATCC 23769] gi|295979195|gb|EFG85919.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter hansenii ATCC 23769] Length = 77 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 54/76 (71%), Positives = 63/76 (82%) Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 YWWN DRYLGPA LL AYRW+ DSRDE GERLD LEDP +L+ C TIMNCTQ+CPKGLN Sbjct: 1 YWWNGDRYLGPATLLAAYRWIADSRDEHAGERLDALEDPMKLFACRTIMNCTQTCPKGLN 60 Query: 243 PAKAIAKIKMMLLDRK 258 PAKAI ++K + ++RK Sbjct: 61 PAKAIGRLKELQMERK 76 >gi|237786499|ref|YP_002907204.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium kroppenstedtii DSM 44385] gi|237759411|gb|ACR18661.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium kroppenstedtii DSM 44385] Length = 249 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 78/232 (33%), Gaps = 23/232 (9%) Query: 30 YRIYRW-NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN----KIDPTLTLRRSCREGI 84 I+R P+ ++ VD +L+ L ++ + CREGI Sbjct: 5 LEIWRQAGPE--SEGHFESVDVDDAVEQMSILELLDHVNEGYIEQGKEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG+CG+ I+G +I + PL V+KD+VVD S Sbjct: 63 CGTCGLTINGRPHGPDKNKPACQQRLFNFKDGDSIKIEPLRSAAYPVVKDMVVDRSALDR 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + A L +H D +K C+ C C +CP N +L Sbjct: 123 VLEQGGFISVMAGTAPDADFLPMNHADAEKALDFAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA 244 L+ + + + E +++ C C CP G+ Sbjct: 179 GAKLEHLKLMPLGKQERGKRARKMVDNLETTFGPCSLYGECADVCPAGIPLT 230 >gi|270303920|gb|ACZ71183.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum lycopersicum] Length = 129 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 1/97 (1%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + NLK ++IYRW PDN G P + Y +DL CGPMVLD L+ IKN+IDPTLT RRSCR Sbjct: 34 ESKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR 93 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 EGICGSC MNIDG N LAC+ + + PLPH Sbjct: 94 EGICGSCAMNIDGCNGLACLTKISS-DSESTITPLPH 129 >gi|309365997|emb|CAP22356.2| hypothetical protein CBG_00873 [Caenorhabditis briggsae AF16] Length = 442 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 16/180 (8%) Query: 69 KIDPTLTLRRSCREGICG---SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDL 125 + D C++ G C + + + L K Sbjct: 156 ETDDFNGYTYKCQQKTSGVVQMCSVGCIHNGQKYTIGQQYKDGDYVFYCKLQGGKCTKQC 215 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + + + + DGLYEC++CACCSTSCPSYWW Sbjct: 216 IGCVDANGQNIYDGQRYKRDETTYQ------------CEDGLYECILCACCSTSCPSYWW 263 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 N+D+YLGPA+L+QAYRW+IDSRD++ ERL + D F ++CHTIMNCT++CPK + P K Sbjct: 264 NADKYLGPAVLMQAYRWVIDSRDDYAQERLHRMHDSFSAFKCHTIMNCTKTCPK-IRPGK 322 >gi|262199038|ref|YP_003270247.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haliangium ochraceum DSM 14365] gi|262082385|gb|ACY18354.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Haliangium ochraceum DSM 14365] Length = 265 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 80/258 (31%), Gaps = 34/258 (13%) Query: 17 IWNA--PTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 +W P + +Y +D +L G + + Sbjct: 7 VWRQKGPQDAGRMVKYEARGITEHMSFLEMLDVVNEELIERG--------------EEPI 52 Query: 75 TLRRSCREGICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLPH----MSVIKD 124 CREGICG+C M I+G C M+ K +Y P VI+D Sbjct: 53 AFDSDCREGICGTCSMVINGRAHGPEKGTTVCQLHMRSFKDGDTIYIEPWRARAFPVIRD 112 Query: 125 LVVDMSHFYSQHRSIEPWLKT-VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 L V+ F + ++ S A + S E C+ C C SCP Sbjct: 113 LAVNRGAFDTIIQAGGYVSANCGSAPDANAMPVSKEKADAAFAAAACIGCGACVASCP-- 170 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 N L A L L + E + E + N D C C +CPK + Sbjct: 171 --NGSAMLFTAAKLAHLHNLPQGQAERLERTEAMVNTMDAAGFGNCTNHYECEAACPKEI 228 Query: 242 NPAKAIAKIKMMLLDRKI 259 + +A + + Sbjct: 229 DRG-VMALMNRDYAKASL 245 >gi|227487218|ref|ZP_03917534.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227541613|ref|ZP_03971662.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glucuronolyticum ATCC 51866] gi|227092876|gb|EEI28188.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227182581|gb|EEI63553.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium glucuronolyticum ATCC 51866] Length = 250 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 80/235 (34%), Gaps = 26/235 (11%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGL----LYIKNKIDPTLTLRRSCREGI 84 I+R D+ + V+ +L+ L L + + CREGI Sbjct: 4 NLEIWRQ-ADSNSEGHFEAIAVEDAVPQMSILELLDHVNLKLIEEGKEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGA---IAVYPLP--HMSVIKDLVVDMSHFY 133 CG+CG+ ++G AC + + I + + P VI+DLVVD S Sbjct: 63 CGTCGLQVNGRPHGLDKNKPACQQRLAGIHNDGDTLKIEPFRSAAYPVIRDLVVDRSALD 122 Query: 134 SQHRSIEPWLKTVSPKPAKELL-QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 P + L SHE+ +K C+ C C +CP N +L Sbjct: 123 RVMEQGGYVSVNAGTAPDADTLATSHENAEKALDFAACIGCGACVAACP----NGAAHLF 178 Query: 193 PAILLQAYRWLI---DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 LQ R R +D LE F C C CP G+ Sbjct: 179 TGAKLQHLRLTPMGEHERGRRARRMIDELETNFG--PCSLYGECADVCPAGIPLT 231 >gi|296090610|emb|CBI40994.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 73/127 (57%), Positives = 92/127 (72%), Gaps = 3/127 (2%) Query: 136 HRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +RSIEPWLK P+ +E QS +DR+K+DGLYEC++CACCSTSCPSYWWN + + GPA Sbjct: 9 YRSIEPWLKARQRPEDGREYRQSPKDRKKLDGLYECILCACCSTSCPSYWWNPEEFPGPA 68 Query: 195 ILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK-M 252 LL AYRW+ DSRD+F ER+ L E LYRC TI NCT +CPK L+PA AI K+K Sbjct: 69 ALLHAYRWVCDSRDDFVDERVQALTEGLKSLYRCRTIKNCTVNCPKSLDPANAIHKMKTR 128 Query: 253 MLLDRKI 259 L+ + + Sbjct: 129 HLVSQPV 135 >gi|172039883|ref|YP_001799597.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium urealyticum DSM 7109] gi|171851187|emb|CAQ04163.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium urealyticum DSM 7109] Length = 249 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R ++ VD +L+ L ++ CREGI Sbjct: 4 NLEIWRQ-AGPNAEGHFESVKVDDAAEQMSILELLDHVNTMYVEAGKEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG+CG+ ++ + I + PL VIKD+VVD S Sbjct: 63 CGTCGLMVNDRPHGPDQNKPACQQRLVSFNDGDTIKLEPLRSAAYPVIKDMVVDRSALDR 122 Query: 135 QHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + A +LL +H D +K C+ C C +CP N +L Sbjct: 123 VMEKGGFVSVQAGTAPDADDLLVNHSDAEKALDHAACIGCGACVAACP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA--KAIAKI 250 L R+E +++ C C CP G+ AI K Sbjct: 179 GAKLVHLTLSPMGREERGKRARAMVDEVETNFGHCSLYGECADVCPAGIPLTAVAAITKE 238 Query: 251 KMMLLDRK 258 + R Sbjct: 239 RARAAFRG 246 >gi|296129761|ref|YP_003637011.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas flavigena DSM 20109] gi|296021576|gb|ADG74812.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Cellulomonas flavigena DSM 20109] Length = 249 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 86/245 (35%), Gaps = 22/245 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCREGI 84 ++R D +TY V +L+ L + +++ + CREGI Sbjct: 4 TLEVWRQR-DAVSPGAFETYEVTDATPEMTLLELLDRLNDQLVVEGREPVAFESDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAV--YPLP--HMSVIKDLVVDMSHFYS 134 CG CGM++DG +C + ++ + V PL V++DLVVD S Sbjct: 63 CGCCGMDVDGRPHGPQANTPSCEQHVRSFQDGDRVVLEPLRSAAFPVVRDLVVDRSALDR 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + + A + ++ C+ C C +CP N L Sbjct: 123 VIQAGGHVAVDAGTAPDADATTVGYLTAEEALDFAACIGCGACVAACP----NGSAMLFT 178 Query: 194 AILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L +R E R + C T C CP G+ P AIA + Sbjct: 179 GARITHLAKLPQTRAERGTRARSMVAQMEHDFGPCSTYGECAIVCPAGI-PLSAIAAVGK 237 Query: 253 MLLDR 257 + Sbjct: 238 ERMRA 242 >gi|25026944|ref|NP_736998.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium efficiens YS-314] gi|259508569|ref|ZP_05751469.1| fumarate reductase, iron-sulfur protein [Corynebacterium efficiens YS-314] gi|23492224|dbj|BAC17198.1| putative succinate dehydrogenase subunit B [Corynebacterium efficiens YS-314] gi|259163836|gb|EEW48390.1| fumarate reductase, iron-sulfur protein [Corynebacterium efficiens YS-314] Length = 249 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 80/248 (32%), Gaps = 23/248 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 I+R +T V +L+ L ++ N+ CREGI Sbjct: 4 TLEIWRQ-AGPTAEGKFETVEVPDAVEQMSILELLDHVNNRYIEEGREPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G A + + + P+ VIKD+VVD S Sbjct: 63 CGTCGLLVNGRPHGADQNKPACAQRLVSYNDGDVLKIEPMRSAAYPVIKDMVVDRSALDR 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + P + L +HE + C+ C C +CP N +L Sbjct: 123 VVQQGGYISVNAGTAPDADTLHLNHEVAELALDHAACIGCGACVAACP----NGAAHLYT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPA--KAIAKI 250 L L ++E +++ C C CP G+ AI K Sbjct: 179 GSKLVHLSLLPLGKEERGLRARKMIDEMETNFGHCSLYGECADVCPAGIPLTAVSAINKE 238 Query: 251 KMMLLDRK 258 + R Sbjct: 239 RARAAFRG 246 >gi|78213604|ref|YP_382383.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Synechococcus sp. CC9605] gi|78198063|gb|ABB35828.1| possible succinate dehydrogenase iron-sulfur protein [Synechococcus sp. CC9605] Length = 242 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 83/242 (34%), Gaps = 23/242 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 RI+R ++ ++ + +L+ L + ++ + ++ CREGI Sbjct: 4 TLRIWRQR-SADQPGEYQSHRLENVSPDLSLLEALDQLNEQLISCGERPVSFEHDCREGI 62 Query: 85 CGSCGMNIDGTNTLA------CVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFYS 134 CGSCG ++G C +++ + + P I+DL+VD S F Sbjct: 63 CGSCGFLVNGQAHGPRAATSVCQLYLREFDDGVVLTLEPWRATAFPPIQDLMVDRSAFDR 122 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T L E C+ C C SC + + L Sbjct: 123 LIAAGGYCSTGTGQAPDGNALPVGREQATSAFSTATCIGCGACVASCRNASAS----LFV 178 Query: 194 AILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E + + + + C + + C CP+ ++ A I+ + Sbjct: 179 AAKLAHLGQLPQGQPERASRADAMQRQMEAEGFGSCSSNLECEAVCPQEIS-ADWISWMH 237 Query: 252 MM 253 Sbjct: 238 RE 239 >gi|254431453|ref|ZP_05045156.1| succinate dehydrogenase [Cyanobium sp. PCC 7001] gi|197625906|gb|EDY38465.1| succinate dehydrogenase [Cyanobium sp. PCC 7001] Length = 250 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 84/243 (34%), Gaps = 25/243 (10%) Query: 29 EYRIYRWN-PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 + RI+R + P G+ Y ++ + +L+ L + ++ + + CREG Sbjct: 9 KLRIWRQDGPGQPGD--FREYQLEAVSADLSLLEALDQLNERLIEAGERPVNFEHDCREG 66 Query: 84 ICGSCGMNIDGT---NTLAC-----VKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFY 133 ICGSCG ++G A + + P ++DLVVD S Sbjct: 67 ICGSCGFLVNGQAHGPRQATSVCQLYLRQFQSGATLTLEPWRASAFPPVQDLVVDRSALD 126 Query: 134 SQHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + T +L E + C+ C C SC + + L Sbjct: 127 RLIAAGGYCSVNTGQAVDGNAMLVGAEQARSAFDTATCIGCGACVASCRNASAS----LF 182 Query: 193 PAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A L L + E + L + C + + C CPK ++ A I+ + Sbjct: 183 VAAKLAHLGQLPQGQPERARRARALQQRMEEEGFGSCSSNLECEAVCPKQIS-ADWISWM 241 Query: 251 KMM 253 Sbjct: 242 YRE 244 >gi|297672030|ref|XP_002814119.1| PREDICTED: hypothetical protein LOC100452181 [Pongo abelii] Length = 297 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 58/118 (49%), Positives = 75/118 (63%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P+P L S + +CACCS +CPSYWWN D+YLG A+L+QAY Sbjct: 174 IHCTPPLPQPPWNLFFSGIPDGPQGYFLQPPLCACCSNTCPSYWWNRDKYLGTAVLIQAY 233 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W+IDSR++F E L L+DPF LY CHTIMNCT++ P GLNP KA A+I+ M++ K Sbjct: 234 HWMIDSREDFTEEYLAKLQDPFSLYHCHTIMNCTRTRPTGLNPGKATAEIRKMMVTYK 291 >gi|325525099|gb|EGD02991.1| succinate dehydrogenase iron-sulfur subunit [Burkholderia sp. TJI49] Length = 67 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 54/67 (80%) Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 PA LLQAYR++ DSRD GERLDNLEDP+RL+RCHTIMNC CPKGLNP KAI KIK Sbjct: 1 PAGLLQAYRFIADSRDTATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKE 60 Query: 253 MLLDRKI 259 +++ R + Sbjct: 61 LMVRRAV 67 >gi|227832089|ref|YP_002833796.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium aurimucosum ATCC 700975] gi|262184056|ref|ZP_06043477.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] gi|227453105|gb|ACP31858.1| succinate dehydrogenase iron-sulfur protein [Corynebacterium aurimucosum ATCC 700975] Length = 249 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 79/242 (32%), Gaps = 21/242 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGI 84 I+R +T VD +L+ L ++ + CREGI Sbjct: 4 TLEIWRQ-AGPTQEGKFETVQVDDAAEQMSILELLDHVNDRLIEEGTEPYAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G AC + + K + P VIKD++VD + Sbjct: 63 CGTCGLLVNGRPHGPGQNTPACQQRLFQFKDGDTIKLEPFRSAAYPVIKDMIVDRAKLDH 122 Query: 135 QHRSI-EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + A L +HE + C+ C C SCP N +L Sbjct: 123 VMEQGGYVSMDAGTAPDADTLHVNHETSEYALDHAACIGCGACVASCP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + ++E + ++D C C CP G+ A + Sbjct: 179 GAKLVHLSLMPLGKEERGRRARNMVDDLEQNFGHCSLYGECADVCPAGVPLTAVSAVTRE 238 Query: 253 ML 254 Sbjct: 239 RA 240 >gi|315226789|ref|ZP_07868577.1| succinate dehydrogenase [Parascardovia denticolens DSM 10105] gi|315120921|gb|EFT84053.1| succinate dehydrogenase [Parascardovia denticolens DSM 10105] Length = 480 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 9/145 (6%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK--------TVSPKPAKELLQSHEDRQ 162 I + PL ++KDL+VD+ + +P+L+ A E LQS ++ Sbjct: 321 IDISPLAGFPILKDLIVDIDPMLEAIKRFQPYLQATGQLKTTESGKIDAFEYLQSPQELT 380 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + L C+ C C +CP Y + ++GPA L+ R++ DSRD+ +R +L Sbjct: 381 RFEQLSTCISCGVCEGACPIY-SGGEAFVGPAALVHEMRFIEDSRDQATEKRWTDLGASD 439 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C ++ C+ +CP+G++ + I Sbjct: 440 ALSACQSVRACSLNCPQGIDVGEVI 464 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 71/229 (31%), Gaps = 16/229 (6%) Query: 38 DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT 97 +G + Y V + +L+ LL IK + DP L R SC G+CGS + ++G T Sbjct: 191 QKQGISWVQEYEVTVPKQE-TLLNVLLMIKRQQDPGLAFRYSCGHGMCGSDAVRVNGAPT 249 Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L C ++ A + + + QS Sbjct: 250 LLCTATVEYWAKDAAENGHRLFRRTIPAPAQVGETGEEETLVGKTRIKAEDTKDTRDAQS 309 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL---IDSRDEFQGER 214 + + D L Q Y + + + + + Sbjct: 310 EPSDGPAPAKVIDISPLAGFPILKDLIVDIDPMLEAIKRFQPYLQATGQLKTTESGKIDA 369 Query: 215 LDNLEDPFRLYR------CHTIMNCTQSCP--KG----LNPAKAIAKIK 251 + L+ P L R C + C +CP G + PA + +++ Sbjct: 370 FEYLQSPQELTRFEQLSTCISCGVCEGACPIYSGGEAFVGPAALVHEMR 418 >gi|295133216|ref|YP_003583892.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Zunongwangia profunda SM-A87] gi|294981231|gb|ADF51696.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Zunongwangia profunda SM-A87] Length = 249 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 23/249 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGL----LYIKNKIDPTLTLRRSCREG 83 +I+R DN+ TY +D + L+ L + + + + + CREG Sbjct: 3 INLQIWRQK-DNQSKGGFQTYTLDHVSQEMSFLEMLDTLNMKLIKQGEYPVEFDHDCREG 61 Query: 84 ICGSCGMNIDG------TNTLACVKDMKDIKGAIAVYPLPH----MSVIKDLVVDMSHFY 133 ICG CGM I+G NT C M+ K +Y P +++DL +D S F Sbjct: 62 ICGQCGMMINGIAHGPLKNTTTCQLHMRSFKDGDTIYIEPFRAKSFPIVRDLKIDRSAFD 121 Query: 134 SQHRS-IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 S + T A + S+E+ + C+ C C SC N+ L Sbjct: 122 RIIASGGYISVDTGQAPEANSIPISNEEAEAAFDAAACIGCGACVASCK----NASAALF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + L + E + + C C CP+ ++ IA++ Sbjct: 178 TSAKITQLELLPQGQKETHLRIKKMVEQMEKEFFGHCSNTEACQVECPENISVLN-IARM 236 Query: 251 KMMLLDRKI 259 + Sbjct: 237 NYEYNKASL 245 >gi|213585253|ref|ZP_03367079.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 112 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 Q+ K C+ C C +CP + N ++GPA + A+R+ DSRD + ER+ Sbjct: 3 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSRDHGKKERM 61 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L P ++ C + C++ CPK ++PA AI + K Sbjct: 62 AQLNSPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 97 >gi|229826535|ref|ZP_04452604.1| hypothetical protein GCWU000182_01910 [Abiotrophia defectiva ATCC 49176] gi|229789405|gb|EEP25519.1| hypothetical protein GCWU000182_01910 [Abiotrophia defectiva ATCC 49176] Length = 238 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 21/241 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID---------PTLTLRRSC 80 I R ++ P + ++L+ V L I + + ++ SC Sbjct: 5 IEIKRQE-TSESKPYFQSIRLNLEKENLTVASLLREINAEPEIKDIEGKPVSQISWECSC 63 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 + CG+C M I+G LAC ++D KG I++ P VIKDL+VD S Y+ + Sbjct: 64 LQKKCGACAMLINGKPRLACDAFLRDYVKKGKISLAPFSKFPVIKDLIVDRSILYNNLKD 123 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+ +L K ++E C+MC CC CP+++ D + G A + Sbjct: 124 IKNYLDNEISLTDKNTDTAYE-------ASRCLMCGCCLEVCPNFYVGGD-FYGAASFVP 175 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R + S ++ + + L + C + C CP G++ K ++K + + ++ Sbjct: 176 ATRLITGS-EKGENKGLKKEYNEHIFKGCGKSLACKDICPAGIDMDKMLSKSNAVAVWKR 234 Query: 259 I 259 + Sbjct: 235 L 235 >gi|294787608|ref|ZP_06752861.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Parascardovia denticolens F0305] gi|294484964|gb|EFG32599.1| probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase [Parascardovia denticolens F0305] Length = 312 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 9/145 (6%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK--------TVSPKPAKELLQSHEDRQ 162 I + PL ++KDL+VD+ + +P+L+ A E LQS ++ Sbjct: 153 IDISPLAGFPILKDLIVDIDPMLEAIKRFQPYLQATGQLKTTESGKIDAFEYLQSPQELT 212 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + L C+ C C +CP Y + ++GPA L+ R++ DSRD+ +R +L Sbjct: 213 RFEQLSTCISCGVCEGACPIY-SGGEAFVGPAALVHEMRFIEDSRDQATEKRWTDLGASD 271 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C ++ C+ +CP+G++ + I Sbjct: 272 ALSACQSVRACSLNCPQGIDVGEVI 296 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 71/229 (31%), Gaps = 16/229 (6%) Query: 38 DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT 97 +G + Y V + +L+ LL IK + DP L R SC G+CGS + ++G T Sbjct: 23 QKQGISWVQEYEVTVPKQE-TLLNVLLMIKRQQDPGLAFRYSCGHGMCGSDAVRVNGAPT 81 Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L C ++ A + + + QS Sbjct: 82 LLCTATVEYWAKDAAENGHRLFRRTIPAPAQVGETGEEETLVGKTRIKAEDTKDTRDAQS 141 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL---IDSRDEFQGER 214 + + D L Q Y + + + + + Sbjct: 142 EPSDGPAPAKVIDISPLAGFPILKDLIVDIDPMLEAIKRFQPYLQATGQLKTTESGKIDA 201 Query: 215 LDNLEDPFRLYR------CHTIMNCTQSCP--KG----LNPAKAIAKIK 251 + L+ P L R C + C +CP G + PA + +++ Sbjct: 202 FEYLQSPQELTRFEQLSTCISCGVCEGACPIYSGGEAFVGPAALVHEMR 250 >gi|298283563|gb|ADI72901.1| succinate dehydrogenase iron-sulphur protein [Ophiocordyceps unilateralis] Length = 112 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 56/108 (51%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-V 101 P M +Y +D++ GPM+LD L+ IKN++DP LT RRS REGICG C MNIDG NTLAC Sbjct: 1 PKMQSYTLDMNKAGPMMLDALIRIKNEVDPALTFRRSGREGICGKCAMNIDGVNTLACLC 60 Query: 102 KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 + D +YPLPH V+KDLV D++ FY Q++SI+P+L+ + Sbjct: 61 RIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQRDNQP 108 >gi|227505622|ref|ZP_03935671.1| succinate dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227197775|gb|EEI77823.1| succinate dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 249 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 79/242 (32%), Gaps = 21/242 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 I+R +T V +L+ L ++ + + + CREGI Sbjct: 4 TLEIWRQ-AGPTQEGKFETIQVADAAEQMSILELLDHVNDGLIEAGNEPFAFASDCREGI 62 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG+CG+ ++G AC + + K + P VIKD++VD + Sbjct: 63 CGTCGLLVNGRPHGPGQNTPACQQRLFQFKDGDTIKLEPFRSAAYPVIKDMIVDRAKLDH 122 Query: 135 QHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 P + L +HE + C+ C C SCP N +L Sbjct: 123 VMEQGGYVSMDAGTAPDADTLHLNHETAEYSLDHAACIGCGACVASCP----NGAAHLFT 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + ++E + ++D C C CP G+ A + Sbjct: 179 GAKLVHLSLMPLGKEERGRRARNMVDDLEQNFGHCSLYGECADVCPAGVPLTAVSAVTRE 238 Query: 253 ML 254 Sbjct: 239 RA 240 >gi|213021272|ref|ZP_03335719.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 106 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+ C C +CP + N ++GPA + A+R+ DSRD + ER+ L Sbjct: 1 QMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHRYNEDSRDHGKKERMAQLN 59 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 P ++ C + C++ CPK ++PA AI + K Sbjct: 60 SPNGVWTCTFVGYCSEVCPKHVDPAAAIQQGK 91 >gi|302340487|ref|YP_003805693.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirochaeta smaragdinae DSM 11293] gi|301637672|gb|ADK83099.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Spirochaeta smaragdinae DSM 11293] Length = 216 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 29/235 (12%) Query: 28 KEYRIYR-WNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 RI+R P + ++ +LD L+ + D +L R SC G C Sbjct: 3 ISLRIFRGIGPITESRDEEFSDFHFTAKESD-TILDLLMKAGLE-DASLLFRHSCHHGSC 60 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGA--IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 G+C IDGT LAC + + + I + PL IKDLVVDMS + + Sbjct: 61 GTCACIIDGTERLACRTPVSEFQATSRIEIRPLNGFPRIKDLVVDMSPLFEK-------- 112 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 L+ E + +C+ C C ++CP ++ + GPA L +R L Sbjct: 113 ----TDETWPYLRRSE--RDGKRFEDCIECGACMSACPV----TEPFQGPAPLAFLHRRL 162 Query: 204 IDSRD----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +S D E + E L + + C C++ CP+ + P + I +++ +L Sbjct: 163 -ESLDAKAEEERKELLSRAGESDAVPACQEHFACSRVCPQRVAPGRRIRELRNLL 216 >gi|197302327|ref|ZP_03167386.1| hypothetical protein RUMLAC_01056 [Ruminococcus lactaris ATCC 29176] gi|197298758|gb|EDY33299.1| hypothetical protein RUMLAC_01056 [Ruminococcus lactaris ATCC 29176] Length = 236 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + +I R + + D + L+ +K+ I ++ SC Sbjct: 7 KIKIRRQESQKSDS-YWQEFEFDGSKNSSVATVLKELNSRTPLKDNSGTIVTPISWECSC 65 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S+ + + + Sbjct: 66 MVRKCGACAMLINERPRLACSTFLHMLKGSTITLEPLSKFPLVRDLIVDRSNLFENLKKL 125 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + + C+MC CC CP++ N + G + A Sbjct: 126 NLWLESEAYMSSWTH-------EPRYQSARCLMCGCCLEVCPNFSANG-TFAGTVAAVNA 177 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + + K Sbjct: 178 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 236 >gi|166030815|ref|ZP_02233644.1| hypothetical protein DORFOR_00489 [Dorea formicigenerans ATCC 27755] gi|166029397|gb|EDR48154.1| hypothetical protein DORFOR_00489 [Dorea formicigenerans ATCC 27755] Length = 236 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + +I R + + D + L+ +K+ I ++ SC Sbjct: 7 KIKIRRQESQKSDS-YWQEFEFDGSKNSSVATVLKELNSRTPLKDNSGNIVTPISWECSC 65 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S + + + Sbjct: 66 MVRKCGACAMLINERPRLACSTFLHTLKGSTITLEPLSKFPLVRDLIVDRSILFENLKKL 125 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + C+MC CC CP++ N + G + A Sbjct: 126 NLWLESEAYMNPWTH-------EPRYQSARCLMCGCCLEVCPNFSANG-TFAGAVAAVNA 177 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + + K Sbjct: 178 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 236 >gi|317499452|ref|ZP_07957718.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893226|gb|EFV15442.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 233 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + RI R + + D + L+ +K+ I ++ SC Sbjct: 4 KIRIRRQESQKSDS-YWQEFEFDGSKNSSVANVLKELNSRTPLKDNSGNIVTPISWECSC 62 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S + + + Sbjct: 63 MVRKCGACAMLINERPRLACSTFLHTLKGSTITLEPLSKFPLVRDLIVDRSILFENLKKL 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + C+MC CC CP++ + + G + A Sbjct: 123 NLWLESEAYMNPWTH-------EPRYQSARCLMCGCCLEVCPNFSASG-TFAGAVAAVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + + K Sbjct: 175 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 233 >gi|253578324|ref|ZP_04855596.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850642|gb|EES78600.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 233 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + RI R + + D + L+ +K+ I ++ SC Sbjct: 4 KIRIRRQESQKSDS-YWQEFEFDGSKNSSVANVLKELNSRTPLKDNSGNIVTPISWECSC 62 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S + + + Sbjct: 63 MVRKCGACAMLINERPRLACSTFLHTLKGSTITLEPLSKFPLVRDLIVDRSILFENLKKL 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + C+MC CC CP++ N + G + A Sbjct: 123 NLWLESEAYMNRWTH-------EPRYQSARCLMCGCCLEVCPNFSANG-TFAGAVAAVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + + K Sbjct: 175 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 233 >gi|474043|emb|CAA53456.1| succinate dehydrogenase subunit b [Haemonchus contortus] Length = 129 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 64/102 (62%), Positives = 88/102 (86%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 ++ QS ++R+++D LYEC++CACCS+SCPSYWWN+D+YLGPA+L+QAYRW+IDSRD++ Sbjct: 14 QMFQSEKERERLDMLYECILCACCSSSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDYPK 73 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ERL + D F ++CHTIMNCT++CPK LNPAKAI +IK +L Sbjct: 74 ERLARMHDAFSAFKCHTIMNCTKTCPKNLNPAKAIGEIKTLL 115 >gi|289422855|ref|ZP_06424688.1| succinate dehydrogenase iron-sulfur subunit [Peptostreptococcus anaerobius 653-L] gi|289156765|gb|EFD05397.1| succinate dehydrogenase iron-sulfur subunit [Peptostreptococcus anaerobius 653-L] Length = 233 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + RI R + + D + L+ +K+ I ++ SC Sbjct: 4 KIRIRRQESQKADS-YWQEFEFDGSRNSSVATVLKELNSRTPLKDNSGNIVTPISWECSC 62 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S+ + + + Sbjct: 63 MVRKCGACAMLINERPRLACSTFLHTLKGSTITLEPLSKFPLVRDLIVDRSNLFENLKKL 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + + C+MC CC CP++ N + G + A Sbjct: 123 NLWLESEAHMSSWTH-------EPRYQSARCLMCGCCLEVCPNFSANG-TFAGAVAAVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + ++ K Sbjct: 175 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAVVWGK 233 >gi|167766621|ref|ZP_02438674.1| hypothetical protein CLOSS21_01127 [Clostridium sp. SS2/1] gi|167711744|gb|EDS22323.1| hypothetical protein CLOSS21_01127 [Clostridium sp. SS2/1] Length = 236 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + RI R + + D + L+ +K+ I ++ SC Sbjct: 7 KIRIRRQESQKSDS-YWQEFEFDGSKNSSVANVLKELNSRTPLKDNSGNIVTPISWECSC 65 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S + + + Sbjct: 66 MVRKCGACAMLINERPRLACSTFLHMLKGSTITLEPLSKFPLVRDLIVDRSILFENLKKL 125 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + C+MC CC CP++ N + G + A Sbjct: 126 NLWLESEAYMNPWTH-------EPRYQSARCLMCGCCLEVCPNFSANG-TFAGAIAAVNA 177 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L + ++ + C ++C CP GL + + + + K Sbjct: 178 FRILNEEQESTHLNEISAEYKKKYFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 236 >gi|325679528|ref|ZP_08159108.1| putative succinate dehydrogenase iron-sulfur subunit [Ruminococcus albus 8] gi|324108815|gb|EGC03051.1| putative succinate dehydrogenase iron-sulfur subunit [Ruminococcus albus 8] Length = 258 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 21/241 (8%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGP------MVLDGLLYIKNK---IDPTLTLRRS 79 E +I R + ++ + ++ L+ +K+K + S Sbjct: 24 ELKILR-RESAQSEAYRQSFIFETEDENAAVSTALTALNARDDLKDKDGKPAKPIRWECS 82 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 C + CG+C M I+G+ LAC +K++ + V PL V+ DL+VD + R + Sbjct: 83 CLQKKCGACAMVINGSPRLACDSKLKELGSVVTVEPLRKFPVVADLIVDRKVMFDSLREM 142 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WLK+ ++E C+ C CC CP+++ +++G A + Sbjct: 143 SVWLKSELTPDENTQDIAYE-------ASGCLQCGCCLDVCPNFYA-GGKFVGMAGGVPV 194 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R + + + E L R+Y C + C + CP GL+ K + + + Sbjct: 195 SRLIEQLPKDEKSEILKEYRK--RVYEGCGKSLACRKICPAGLDIEKLLVNSNAASVWKS 252 Query: 259 I 259 + Sbjct: 253 L 253 >gi|300933768|ref|ZP_07149024.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium resistens DSM 45100] Length = 249 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 74/241 (30%), Gaps = 21/241 (8%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGIC 85 I+R ++ VD +L+ L ++ N CREGIC Sbjct: 5 LEIWRQ-AGPSAEGHFESVDVDDAVEQMSILELLDHVNNSYVEAGKEPFAFASDCREGIC 63 Query: 86 GSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLP--HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++G + + + PL VIKD+VVD S Sbjct: 64 GTCGLLVNGRPHGPDKNKPACQQRLFSFNDGDTLKLEPLRSAAYPVIKDMVVDRSALDRV 123 Query: 136 HRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 P + L +H D +K C+ C C +CP N +L Sbjct: 124 MEKGGFVSVMAGTAPDADSLAVNHSDAEKALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L R E +++ C C CP G+ A K Sbjct: 180 AKLVHLTLSPMGRQERGRRARKMVDELETNFGHCSLFGECADVCPAGIPLTAVSAVTKER 239 Query: 254 L 254 Sbjct: 240 A 240 >gi|225020245|ref|ZP_03709437.1| hypothetical protein CORMATOL_00248 [Corynebacterium matruchotii ATCC 33806] gi|305679719|ref|ZP_07402529.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium matruchotii ATCC 14266] gi|224946989|gb|EEG28198.1| hypothetical protein CORMATOL_00248 [Corynebacterium matruchotii ATCC 33806] gi|305660339|gb|EFM49836.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Corynebacterium matruchotii ATCC 14266] Length = 249 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 81/240 (33%), Gaps = 22/240 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIK----NKIDPTLTLRRSCREGIC 85 I+R + V+ +L+ L ++ + CREGIC Sbjct: 5 LEIWRQ-AGPYHEGHFEYVTVEDAVAQMSILELLDHVNSGLIEEGKEPFAFASDCREGIC 63 Query: 86 GSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQ 135 G+CG+ ++G AC + + ++K + P VIKD+VVD S Sbjct: 64 GTCGLLVNGRPHGLEQNQPACQQRLLNVKDGSTLKIEPFRSAAFPVIKDMVVDRSALDRV 123 Query: 136 HRSIEPWLKTVSPKPAKELLQS-HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + P + L H+ + C+ C C +CP N +L Sbjct: 124 MQQGGYVSVNSGTAPDADTLHMNHQTAELALDHAACIGCGACVAACP----NGAAHLFTG 179 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + ++E +++ C C CP G+ P A+A + Sbjct: 180 AKLVHLSLMPLGKEERGRRARKMIDELETNFGHCTLYGECADVCPAGI-PLSAVAAVNKE 238 >gi|296090609|emb|CBI40993.3| unnamed protein product [Vitis vinifera] Length = 158 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 2/97 (2%) Query: 28 KEYRIYRWNPDNKG-NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 KE++IYRWNPD P + +Y+VDL CGPMVLD L IK + D +L+ RRSCREGICG Sbjct: 59 KEFQIYRWNPDFPNTKPHLQSYFVDLSTCGPMVLDALQKIKAEEDSSLSYRRSCREGICG 118 Query: 87 SCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVI 122 SC MNIDGTNT+AC++ D + PLPH+S+ Sbjct: 119 SCAMNIDGTNTVACLRPIDADTTKPTTITPLPHISIN 155 >gi|78184161|ref|YP_376596.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Synechococcus sp. CC9902] gi|78168455|gb|ABB25552.1| succinate dehydrogenase subunit B [Synechococcus sp. CC9902] Length = 241 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 23/242 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 RI+R + +T+ ++ + +L+ L + ++ ++ CREGI Sbjct: 4 TLRIWRQTTASD-LGSYETHILENVSSDLSLLEALDQLNEQLISSGLRPVSFEHDCREGI 62 Query: 85 CGSCGMNIDGT---NTLAC-----VKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG ++G A AI + P I+DL+VD S Sbjct: 63 CGSCGFLVNGQGHGPRTATSVCQLYLREFSDGAAITLAPWKANAFPTIQDLMVDRSALDR 122 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T A + K C+ C C SC + + L Sbjct: 123 IIAAGGYCSTGTGQAPDANAQPIGQQQALKAFDTATCIGCGACVASCRNASAS----LFV 178 Query: 194 AILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E + + + C + + C CP+ ++ A I+ + Sbjct: 179 AAKLAHLGQLPQGQPERSTRARTMQLRMEQEGFGSCSSNLECEAVCPQEIS-ADWISWMH 237 Query: 252 MM 253 Sbjct: 238 KE 239 >gi|282857301|ref|ZP_06266538.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Pyramidobacter piscolens W5455] gi|282584801|gb|EFB90132.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein [Pyramidobacter piscolens W5455] Length = 234 Score = 99.8 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 8/193 (4%) Query: 66 IKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDL 125 ++ + P + C G CG+C M ++G TLAC + + + + PL ++ DL Sbjct: 48 LEGREAPPVRWECGCACGKCGACAMRVNGLPTLACKAFLGPLGQTVTLEPLSKFPLVADL 107 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 VVD + Q + I WL + + + + C+MC CC CP++ Sbjct: 108 VVDRGVIFEQLKKIHLWLSGAA-------VTREKTHELRFQSSRCLMCGCCLEICPNFRA 160 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 G + AYR DE C T + C CP G+ + Sbjct: 161 GGGF-AGALAAVGAYRMFNQESDEAHRAEAAKRYVASYYSGCGTSLACRAICPAGIPVDE 219 Query: 246 AIAKIKMMLLDRK 258 I++ + R+ Sbjct: 220 LISRSNAAAVWRR 232 >gi|297626127|ref|YP_003687890.1| succinate dehydrogenase, subunit B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921892|emb|CBL56452.1| Succinate dehydrogenase, subunit B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 252 Score = 99.8 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 78/242 (32%), Gaps = 22/242 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 I+R + + Y V+ +L+ L + ++I + CREG Sbjct: 3 VTLDIWRQ-AGPRAKGEFENYVVNDAEPEMSILELLDRLNDQIIEQGGEPVVFESDCREG 61 Query: 84 ICGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY 133 +CG CG ++G AC + ++ P VI+DL +D + Sbjct: 62 VCGCCGFLVNGKPHGPLANTPACRQHLRAFPEVTHFKLEPFRSNAFPVIRDLAIDRTALD 121 Query: 134 SQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++ A Q H+ + C+ C C +CP N L Sbjct: 122 ELIQAGGTVNVMTGTAPDADTSPQPHQVAELALDFASCIGCGACVAACP----NGSAMLF 177 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + +++ + + C C SCP G++ AIA + Sbjct: 178 AGAKLAHLAKMPQGKEQRSSRARRMVAELDEDFGPCSLYGECAISCPAGISLT-AIATVN 236 Query: 252 MM 253 Sbjct: 237 KE 238 >gi|116071201|ref|ZP_01468470.1| succinate dehydrogenase [Synechococcus sp. BL107] gi|116066606|gb|EAU72363.1| succinate dehydrogenase [Synechococcus sp. BL107] Length = 244 Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 79/242 (32%), Gaps = 23/242 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 RI+R + +T+ ++ + +L+ L + ++ ++ CREGI Sbjct: 4 TMRIWRQTTASD-LGSYETHILEHVSSDLSLLEALDQLNEQLISSGKRPVSFEHDCREGI 62 Query: 85 CGSCGMNIDGT---NTLAC-----VKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYS 134 CGSCG ++G A +I + P I+DL+VD S Sbjct: 63 CGSCGFLVNGQGHGPRTATSVCQLYLREFPDGASITLAPWKAKAFPTIQDLMVDRSALDR 122 Query: 135 QHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + T A + K C+ C C SC + + L Sbjct: 123 IIAAGGYCSTGTGQAPDANAQPIGRQQASKAFDTATCIGCGACVASCRNASAS----LFV 178 Query: 194 AILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A L L + E + + C + C CP+ ++ A I+ + Sbjct: 179 AAKLAHLGQLPQGQPERASRAITMQRRMEEEGFGSCSNNLECEAVCPQEIS-ADWISWMH 237 Query: 252 MM 253 Sbjct: 238 RE 239 >gi|294791549|ref|ZP_06756706.1| fumarate reductase, iron-sulfur protein [Scardovia inopinata F0304] gi|294458020|gb|EFG26374.1| fumarate reductase, iron-sulfur protein [Scardovia inopinata F0304] Length = 292 Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%) Query: 110 AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE---------------- 153 I + PLP + ++DL+ D+ Q + ++P+ Sbjct: 125 WIDLAPLPGFTAVRDLITDIKPMLDQIKKLKPYYLQDPDYLQDPDSLQDPENSSSADKGN 184 Query: 154 -----LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 LQ E+ + + L C+ C C +CP + + ++GPA L+ R++ DSRD Sbjct: 185 ITALEYLQKPEELAQFELLSTCISCGICEGACPVF-VGGEAFIGPAALVSQIRFIKDSRD 243 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 Q ER L + L C ++ C+ +CP+ ++ + I Sbjct: 244 RAQTERWKRLSEDDALSACQSVRACSLNCPQNIDVGEVI 282 >gi|72392737|ref|XP_847169.1| electron transfer protein [Trypanosoma brucei TREU927] gi|62359214|gb|AAX79657.1| electron transfer protein, putative [Trypanosoma brucei] gi|70803199|gb|AAZ13103.1| electron transfer protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261330382|emb|CBH13366.1| electron transfer protein, putative [Trypanosoma brucei gambiense DAL972] Length = 242 Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 5/124 (4%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + R+ R++P+ +++Y D + MVLD + +K DPTL R SC Sbjct: 22 AADSKKAILRLIRFDPETN-KQRVESYEYD-KHHDYMVLDLITAVKAHQDPTLAFRASCC 79 Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ I P Sbjct: 80 EGVCGSCAMNINGVNSLACITFSQQVT---TVGPLPNFPVIKDFVVDLRHFFRQYAYIRP 136 Query: 142 WLKT 145 +++ Sbjct: 137 FVRN 140 >gi|474063|emb|CAA53463.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 136 Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 73/135 (54%), Positives = 99/135 (73%), Gaps = 3/135 (2%) Query: 94 GTNTLACV-KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--PKP 150 G N LAC K D+ +YPLPHM VIKDLV D+S F+ Q+RSI+PWL+ Sbjct: 1 GENNLACTLKIDTDLSKTTKIYPLPHMYVIKDLVPDLSLFFEQYRSIQPWLQKNEKLTLG 60 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K++ QS ++R +IDGLYEC++CACCS+SCPSYWWN+D+YLGPA+L+QAYRW++DSRD++ Sbjct: 61 EKQMFQSADERARIDGLYECILCACCSSSCPSYWWNADKYLGPAVLMQAYRWIVDSRDDY 120 Query: 211 QGERLDNLEDPFRLY 225 ERL + D + + Sbjct: 121 ARERLARIHDAYSAF 135 >gi|290968464|ref|ZP_06560003.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Megasphaera genomosp. type_1 str. 28L] gi|290781460|gb|EFD94049.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Megasphaera genomosp. type_1 str. 28L] Length = 233 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 89/239 (37%), Gaps = 18/239 (7%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNK---IDPTLTLRRSC 80 + RI R K + + D + L+ +K+ I ++ SC Sbjct: 4 KIRIRRQE-SRKSDSYWQEFEYDGSKNSSVATVLKELNSRTPLKDNSGNIVTPISWECSC 62 Query: 81 REGICGSCGMNIDGTNTLACVKD-MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 CG+C M I+ LAC I + PL +++DL+VD S+ + + + Sbjct: 63 MVRKCGACAMLINERPRLACSTFLHTLKGSTIILEPLSKFPLVRDLIVDRSNLFENLKKL 122 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 WL++ + + + C+MC CC CP++ N + G + A Sbjct: 123 NLWLESEAYMSSWTH-------EPRYRSARCLMCGCCLEVCPNFSANG-TFAGTVAAVNA 174 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L ++++ + C ++C CP GL + + + + K Sbjct: 175 FRILNEAQESTHLNEISAEYKKRFFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK 233 >gi|146087498|ref|XP_001465841.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069941|emb|CAM68271.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322499284|emb|CBZ34358.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 247 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 7/131 (5%) Query: 19 NAPTGEKNLKE--YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 E + K+ ++ R++P+ + +++Y D + MVLD L+ +K DPTL Sbjct: 20 TDAAAEPHAKKAVLQLVRFDPETNSS-RVESYEYD-KHHEYMVLDLLIAVKAHQDPTLAF 77 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 R SC EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ Sbjct: 78 RSSCCEGVCGSCAMNINGINSLACITFAQQVT---TVAPLPNFPVIKDFVVDLRHFFQQY 134 Query: 137 RSIEPWLKTVS 147 I P+++ + Sbjct: 135 AYIRPFVRNAN 145 >gi|157869874|ref|XP_001683488.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126553|emb|CAJ04929.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 247 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 7/131 (5%) Query: 19 NAPTGEKNLKE--YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 E + K+ ++ R++P+ + +++Y D + MVLD L+ +K DPTL Sbjct: 20 TDAAAEPHAKKAVLQLVRFDPETNSS-RVESYEYD-KHHEYMVLDLLIAVKAHQDPTLAF 77 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 R SC EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ Sbjct: 78 RSSCCEGVCGSCAMNINGINSLACITFAQQVT---TVAPLPNFPVIKDFVVDLRHFFQQY 134 Query: 137 RSIEPWLKTVS 147 I P+++ S Sbjct: 135 AYIRPFVRNAS 145 >gi|322492022|emb|CBZ27297.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 247 Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 5/114 (4%) Query: 34 RWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNID 93 R++P+ + +++Y D + MVLD L+ +K DPTL R SC EG+CGSC MNI+ Sbjct: 37 RFDPETNSS-RVESYEYD-KHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGSCAMNIN 94 Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ I P+++ + Sbjct: 95 GINSLACITFAQQVT---TVAPLPNFPVIKDFVVDLRHFFQQYAYIRPFVRNAN 145 >gi|154337998|ref|XP_001565225.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062272|emb|CAM36660.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 247 Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 5/128 (3%) Query: 20 APTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 A N ++ R++P+ + +++Y D + MVLD L+ +K DPTL R S Sbjct: 23 AAKSHANKAVLQLVRFDPETNSS-RVESYEYD-KHHEYMVLDLLIAVKAHQDPTLAFRSS 80 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 C EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ I Sbjct: 81 CCEGVCGSCAMNINGINSLACITFAQHVT---TVGPLPNFPVIKDFVVDLRHFFQQYAYI 137 Query: 140 EPWLKTVS 147 P+++ + Sbjct: 138 RPFVRNAN 145 >gi|33865124|ref|NP_896683.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Synechococcus sp. WH 8102] gi|33638808|emb|CAE07105.1| possible succinate dehydrogenase iron-sulfur protein [Synechococcus sp. WH 8102] Length = 242 Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 23/243 (9%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREG 83 RI+R + + + + +L+ L + ++ ++ CREG Sbjct: 3 ITLRIWRQ-AAADQPGRYERHALADVSPEVSLLEALDQLNEQLISAGKRPVSFEHDCREG 61 Query: 84 ICGSCGMNIDGTNTLA--------CVKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFY 133 ICGSCG ++G + + P I+DL+V+ S Sbjct: 62 ICGSCGFLVNGQAHGPRRATSVCQLYLREFSDGAELTLEPWRAKAFPAIQDLMVERSSLD 121 Query: 134 SQHRSIEP-WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T L + C+ C C SC + + L Sbjct: 122 RLIAAGGYCSTGTGQAPDGNALPVGRDQATSAFSTATCIGCGACVASCRNASAS----LF 177 Query: 193 PAILLQAYRWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 A L L + E + + + C + + C CP+ ++ A I+ + Sbjct: 178 VAAKLAHLGQLPQGQPERASRARAMQDQMVAEGFGNCSSNLECEAVCPQEIS-ADWISWM 236 Query: 251 KMM 253 Sbjct: 237 HRE 239 >gi|32170725|dbj|BAC78391.1| succinate dehydrogenase iron-sulfur protein subunit [Cucumis sativus] Length = 162 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 76/123 (61%), Positives = 93/123 (75%), Gaps = 3/123 (2%) Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 L L+ IKN+IDP+LT RRSCREGICGSC MNIDG N LAC+ + + PLPH Sbjct: 41 FLMRLIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISS-GDPSTITPLPH 99 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYECVMCACC 176 M VIKDLVVDM++FY+Q++SIEPWLK S P E+LQS +DR K+DG+YEC++CACC Sbjct: 100 MFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACC 159 Query: 177 STS 179 STS Sbjct: 160 STS 162 >gi|322815269|gb|EFZ23959.1| hypothetical protein TCSYLVIO_9919 [Trypanosoma cruzi] Length = 295 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 AP R+ R++P +++Y D MVLD + +K DPTL R Sbjct: 74 TAPEATSKKAILRLIRFDP-TTNRQRIESYEYD-KQHEYMVLDLITAVKAHQDPTLAFRA 131 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SC EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ Sbjct: 132 SCCEGVCGSCAMNINGINSLACITFSQQVT---TVGPLPNFPVIKDFVVDLRHFFRQYAQ 188 Query: 139 IEPWLKTVS 147 I P+++ + Sbjct: 189 IRPFVRNTN 197 >gi|71652686|ref|XP_814994.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70880016|gb|EAN93143.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 282 Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 AP R+ R++P +++Y D MVLD + +K DPTL R Sbjct: 61 TAPEATSKKAILRLIRFDP-TTNRQRIESYEYD-KQHEYMVLDLITAVKAHQDPTLAFRA 118 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 SC EG+CGSC MNI+G N+LAC+ + + V PLP+ VIKD VVD+ HF+ Q+ Sbjct: 119 SCCEGVCGSCAMNINGINSLACITFSQQVT---TVGPLPNFPVIKDFVVDLRHFFRQYAQ 175 Query: 139 IEPWLKTVS 147 I P+++ + Sbjct: 176 IRPFVRNTN 184 >gi|73946755|ref|XP_850580.1| PREDICTED: similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) [Canis familiaris] Length = 119 Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 47/68 (69%), Positives = 56/68 (82%) Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L AIL+QAYRW+IDSRD+F ERL L+DPF LYRC TIMNCT++CPKGLNP KAIA+I Sbjct: 38 LIHAILMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCRTIMNCTRTCPKGLNPGKAIAEI 97 Query: 251 KMMLLDRK 258 K M++ K Sbjct: 98 KKMMVTYK 105 >gi|474051|emb|CAA53460.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 136 Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 71/135 (52%), Positives = 102/135 (75%), Gaps = 3/135 (2%) Query: 94 GTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP-- 150 G NTLAC+K + ++PLPHM V+KDLV D++ F+ Q+RSI+PWL+ +P Sbjct: 1 GENTLACIKKINTDTSKSTKIHPLPHMYVMKDLVPDLTLFFEQYRSIQPWLQKKTPLKLG 60 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K++ QS ++R+++D LYEC++CACCS+SCPSYWWN+D+YLGPA+L+QAYRW+IDSRD++ Sbjct: 61 DKQMFQSEKERERLDMLYECILCACCSSSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDY 120 Query: 211 QGERLDNLEDPFRLY 225 ERL + D F + Sbjct: 121 PKERLARMHDAFSAF 135 >gi|312897590|ref|ZP_07757007.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Megasphaera micronuciformis F0359] gi|310621223|gb|EFQ04766.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Megasphaera micronuciformis F0359] Length = 239 Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 23/243 (9%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNC----GPMVLDGLLY-----IKNKIDPTLTLR 77 + I R G +D + D D + L + K+ P + Sbjct: 1 MITVHITRGEA-VHGASHIDVFTYDGDMTITVADYLTLLNRDKALRTDVNGKLRPPVIWD 59 Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKD--IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 C EG CG+C M I+G LAC + +G+I + PL +I DL V + Sbjct: 60 CGCLEGKCGACAMVINGVPRLACRSFLDKVGRRGSITIRPLSKFPLICDLSVSKDKMFET 119 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-----RY 190 + + W + + + E R I +C+ C CC CP++ D + Sbjct: 120 LKKRQIWTEKA------VISEDTETRNLIYKSGQCLECGCCLEVCPNFKGIFDGRGDNAF 173 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 GP ++ YR S D++ +L L + C M C CP + + A++ Sbjct: 174 PGPIYAVETYRADRTSDDDYHRHKLHILYNDLFYENCDNSMGCKAVCPAKIPHDELQARL 233 Query: 251 KMM 253 Sbjct: 234 NSK 236 >gi|474057|emb|CAA53464.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 136 Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 70/135 (51%), Positives = 101/135 (74%), Gaps = 3/135 (2%) Query: 94 GTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP-- 150 G NTLAC+K + ++PLPHM V+KDLV D++ F+ Q+RSI+PWL+ +P Sbjct: 1 GENTLACIKKINTDTSKSTKIHPLPHMYVMKDLVPDLTLFFEQYRSIQPWLQKKTPLKLG 60 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K++ QS ++R+++D LYEC++CACCS+SCPSYWWN+D+YLGPA+ +QAYRW+IDSRD++ Sbjct: 61 DKQMFQSEKERERLDMLYECILCACCSSSCPSYWWNADKYLGPAVPMQAYRWIIDSRDDY 120 Query: 211 QGERLDNLEDPFRLY 225 ERL + D F + Sbjct: 121 PKERLARMHDAFSAF 135 >gi|156337042|ref|XP_001619783.1| hypothetical protein NEMVEDRAFT_v1g150310 [Nematostella vectensis] gi|156203625|gb|EDO27683.1| predicted protein [Nematostella vectensis] Length = 94 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 1/84 (1%) Query: 20 APTGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 A + E K + +YRW+PD P M + VDL++CGPMVLD L+ IKN++DPTLT RR Sbjct: 11 ATSQEPRYKTFSVYRWDPDKAGDKPRMQEFKVDLNDCGPMVLDALIKIKNEVDPTLTFRR 70 Query: 79 SCREGICGSCGMNIDGTNTLACVK 102 SCREGICGSC MNI G NTLAC+ Sbjct: 71 SCREGICGSCAMNIGGKNTLACIW 94 >gi|111025050|ref|YP_707470.1| succinate dehydrogenase Fe-S protein [Rhodococcus jostii RHA1] gi|110824029|gb|ABG99312.1| possible succinate dehydrogenase Fe-S protein [Rhodococcus jostii RHA1] Length = 165 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 8/144 (5%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P G + +I R+NP++ G ++ V +L+ L Y+K +D TLT RR Sbjct: 17 PVPEGAV-MVTLKIRRFNPEDPGKAGWVSFEVPCLPTD-RLLNLLTYVKGYLDGTLTFRR 74 Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDI------KGAIAVYPLPHMSVIKDLVVDMSHF 132 SC G+CGS M I+G N LAC M+D+ + + PL + V KDLVVDM F Sbjct: 75 SCAHGVCGSDAMVINGVNRLACKVLMRDMLNKDGKNTTVTIAPLKGLPVEKDLVVDMEPF 134 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQ 156 +S + + P +P+ + Sbjct: 135 FSAYGAATPDAVDAAPECPSAPRR 158 >gi|142967|gb|AAA22471.1| succinate dehydrogenase [Bacillus subtilis] Length = 142 Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 3/128 (2%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECVMCACCSTSCPSYWWN 186 D S + + ++ W+ + E R Q L +C+ C C +CP+ + Sbjct: 1 DRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNVN-S 59 Query: 187 SDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 +++GPA + Q + + ERL+ L D L C NC QSCPKG+ Sbjct: 60 KSKFMGPAPMSQVRLFNAHPTGAMNKSERLEALMDEGGLADCGNSQNCVQSCPKGIPLTT 119 Query: 246 AIAKIKMM 253 +IA + Sbjct: 120 SIAALNRD 127 >gi|258646015|ref|ZP_05733484.1| succinate dehydrogenase, iron-sulfur protein [Dialister invisus DSM 15470] gi|260403386|gb|EEW96933.1| succinate dehydrogenase, iron-sulfur protein [Dialister invisus DSM 15470] Length = 236 Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 18/226 (7%) Query: 28 KEYRIYRWNPDNKGNPCMDTY--------YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + I R D++ P + V LL K + S Sbjct: 3 IKIIIKRQK-DSRSTPYTQEFIYTGDGRLTVADFLSELNARMPLLTADGKETEKINYASS 61 Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY--PLPHMSVIKDLVVDMSHFYSQHR 137 C+E CG+C M I+G LAC + +I + PL VI DL VD +++ + Sbjct: 62 CQEKKCGACAMLINGLPRLACSLFLCNIVKKGKIELAPLSKFPVISDLRVDREKIFARLK 121 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ WL K DR +C+MC CC CP+Y + G A ++ Sbjct: 122 EMQVWLSEKDRDAKKG------DRSLQYDAGQCLMCGCCLEICPNY-TPESTFSGAASMI 174 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 A++ L ++++ ++L + + C ++C + CP GL Sbjct: 175 HAFKILEQNKEDIHLQKLKENYEKYFFAGCSQSLSCVKICPLGLPL 220 >gi|153953410|ref|YP_001394175.1| succinate dehydrogenase iron-sulfur protein [Clostridium kluyveri DSM 555] gi|146346291|gb|EDK32827.1| Predicted succinate dehydrogenase iron-sulfur protein [Clostridium kluyveri DSM 555] Length = 233 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 11/193 (5%) Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACV---KDMKDIKGAIAVYPLPHMSVIKDL 125 + SC E CG+C M I+G LAC K++K K I + PL VI DL Sbjct: 49 NNARRIIWECSCLEKKCGACAMLINGVPRLACAVFLKELKCKKNTIVLEPLSKFPVISDL 108 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 VD + + + + WL+ + DR+ CVMC CC CPS+ Sbjct: 109 KVDRNILFENMKRMRLWLEDNVS-------INFSDREYQYQSSRCVMCGCCLEVCPSFSV 161 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + G + A++ + S Q + L C ++C + CP GL + Sbjct: 162 KGN-FGGAVSMSAAFKLIDQSAYGKQRDELMKKYRKNFFEGCGKSLSCDKICPIGLPLQE 220 Query: 246 AIAKIKMMLLDRK 258 + K + K Sbjct: 221 LLVKSNSAAIWHK 233 >gi|184199906|ref|YP_001854113.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Kocuria rhizophila DC2201] gi|183580136|dbj|BAG28607.1| putative succinate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] Length = 238 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 79/243 (32%), Gaps = 37/243 (15%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKID----PTLTLRRSCRE 82 L ++R PD +T + VL+ L + ++ ++ CRE Sbjct: 2 LLTVHVWRQ-PDADTPGGFETVHPVQAREDMSVLELLDSVNETLERQGEEPVSFDDGCRE 60 Query: 83 GICGSCGMNIDGTNTLACVKDMK--------DIKGAIAVYPLPH--MSVIKDLVVDMSHF 132 GICG CG+ +DG I V P+ + V KDL VD Sbjct: 61 GICGKCGVTVDGVPHGPDRNRASCMQSLNAYRDGDEIFVEPMRAGALPVKKDLAVDKKSL 120 Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + K C+ C C +CP + ++G Sbjct: 121 RRVSKEAK-----------------FPLAMKALNTAGCISCGACIAACP--NGSGQLFVG 161 Query: 193 -PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + RDE + LD + F C + +CT+ CP GL + + Sbjct: 162 TMLKHLPPLAKNPEERDERAAKVLDAADQEFG--PCSLLGDCTEVCPAGLPLENLTSVAR 219 Query: 252 MML 254 L Sbjct: 220 ENL 222 >gi|322489856|emb|CBZ25117.1| putative succinate dehydrogenase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 197 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/94 (50%), Positives = 64/94 (68%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN + +LGPA+LLQ+YRWL++ D ER+ E Sbjct: 72 NRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFE 131 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NCT +CPK LNP A +IK + Sbjct: 132 TGNLVNMCHNIFNCTITCPKFLNPGLASKEIKRL 165 >gi|157866916|ref|XP_001682013.1| succinate dehydrogenase [Leishmania major strain Friedlin] gi|68125464|emb|CAJ03325.1| putative succinate dehydrogenase [Leishmania major strain Friedlin] Length = 197 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/94 (48%), Positives = 64/94 (68%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN + +LGPA+LLQ+YRWL++ D ER+ E Sbjct: 72 NRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFE 131 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNP A +IK + Sbjct: 132 TGNLVNMCHNIFNCSITCPKFLNPGLASKEIKRL 165 >gi|219854035|ref|YP_002471157.1| hypothetical protein CKR_0692 [Clostridium kluyveri NBRC 12016] gi|219567759|dbj|BAH05743.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 234 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 11/193 (5%) Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACV---KDMKDIKGAIAVYPLPHMSVIKDL 125 + SC E CG+C M I+G LAC K++K K I + PL VI DL Sbjct: 50 NNARRIIWECSCLEKKCGACAMLINGVPRLACAVFLKELKCKKNTIVLEPLSKFPVISDL 109 Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 VD + + + + WL+ + DR+ CVMC CC CPS+ Sbjct: 110 KVDRNILFENMKRMRLWLEDNVS-------INFSDREYQYQSSRCVMCGCCLEVCPSFSV 162 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + G + A++ + S Q + L C ++C + CP GL + Sbjct: 163 KGN-FGGAVSMSAAFKLIDQSAYGKQRDELMKKYRKNFFEGCGKSLSCDKICPIGLPLQE 221 Query: 246 AIAKIKMMLLDRK 258 + K + K Sbjct: 222 LLVKSNSAAIWHK 234 >gi|197127410|gb|ACH43908.1| putative succinate dehydrogenase Ip subunit [Taeniopygia guttata] Length = 118 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Query: 22 TGEKNLKEYRIYRWNPDN-KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 LK++ IYRW+PD P M TY VDL+ CGPMVLD L+ IKN++D TLT RRSC Sbjct: 34 AAAPRLKKFAIYRWDPDKAGDKPRMQTYEVDLNKCGPMVLDALIKIKNEMDSTLTFRRSC 93 Query: 81 REGICGSCGMN 91 REGICGSC MN Sbjct: 94 REGICGSCAMN 104 >gi|330862919|emb|CBX73054.1| hypothetical protein YEW_HI32220 [Yersinia enterocolitica W22703] Length = 89 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 52/84 (61%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E+ IYR+NPD P M Y ++ + M+L L + DPTL+ RRSCREG+CGS Sbjct: 4 EFSIYRYNPDVDNAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIA 112 G+N++G N LAC+ + ++ AI Sbjct: 64 GLNMNGKNGLACITPVSALQKAIK 87 >gi|146082064|ref|XP_001464438.1| succinate dehydrogenase [Leishmania infantum JPCM5] gi|134068530|emb|CAM66825.1| putative succinate dehydrogenase [Leishmania infantum JPCM5] gi|322497844|emb|CBZ32920.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 197 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 46/94 (48%), Positives = 64/94 (68%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN + +LGPA+LLQ+YRWL++ D ER+ E Sbjct: 72 NRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFE 131 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNP A +IK + Sbjct: 132 TGNLVNMCHNIFNCSITCPKFLNPGLASKEIKRL 165 >gi|213021642|ref|ZP_03336089.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 61 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/59 (59%), Positives = 42/59 (71%) Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 AYR+LIDSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 1 AYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 59 >gi|154334608|ref|XP_001563551.1| succinate dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060572|emb|CAM42120.1| putative succinate dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 184 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSCP 181 L + + I + + L+ D R +++GLYECV+CA C+ SCP Sbjct: 34 LYTAKDNSKTAMHLITRRAPNANYTVNRWYLKEKVDSSNRMRLEGLYECVLCASCTGSCP 93 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 YWWN + +LGPA+LLQ+YRWL++ D ER+ E + CH I NCT +CPK L Sbjct: 94 QYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRLFETGSLVNMCHNIFNCTITCPKFL 153 Query: 242 NPAKAIAKIKMM 253 NP A +IK + Sbjct: 154 NPGLASKEIKRL 165 >gi|78190791|gb|ABB29717.1| succinate dehydrogenase iron-sulfur protein [Monosiga brevicollis] Length = 109 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 70/109 (64%), Positives = 88/109 (80%), Gaps = 2/109 (1%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CREGICGSC MNIDGTNTLAC + + A+ + PLPHM V+KDLV DM++FY Q+++ Sbjct: 1 CREGICGSCSMNIDGTNTLACLCRVTTESSSAMKINPLPHMYVVKDLVPDMANFYQQYQA 60 Query: 139 IEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 IEPWL+T P+ +E LQS EDR+K+DG+YEC++CACCSTSCPSYWWN Sbjct: 61 IEPWLQTDKAPEDGREYLQSVEDRKKLDGMYECILCACCSTSCPSYWWN 109 >gi|213962236|ref|ZP_03390500.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Capnocytophaga sputigena Capno] gi|213955242|gb|EEB66560.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Capnocytophaga sputigena Capno] Length = 438 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 12/108 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGE 213 ++ Y C C C+ CP+ + L P ++ R ID D FQ + Sbjct: 299 WIQLMNAYTCTECGRCTDECPANLT--GKKLSPRAIMMKTRDRLEEIGRNIDKHDTFQPD 356 Query: 214 RLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L D P L+ C T C + CP G+NP I ++ L+ + Sbjct: 357 GKQLLGDYITPEELWACTTCNACVEVCPVGINPLSIIMDMRQYLVMEQ 404 >gi|71401706|ref|XP_803796.1| succinate dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70866483|gb|EAN82006.1| succinate dehydrogenase, putative [Trypanosoma cruzi] Length = 186 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 48/94 (51%), Positives = 65/94 (69%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN +++LGPA+LLQ+YRWLI+ D R+ E Sbjct: 74 NRNRLEGLYECVLCASCTGSCPQYWWNREQFLGPAVLLQSYRWLIEPLDRDYDSRVKMFE 133 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNPA A +IK M Sbjct: 134 HGPLVNFCHNIYNCSITCPKFLNPAYASKEIKRM 167 >gi|322816241|gb|EFZ24622.1| succinate dehydrogenase, putative [Trypanosoma cruzi] Length = 186 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 48/94 (51%), Positives = 65/94 (69%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN +++LGPA+LLQ+YRWLI+ D R+ E Sbjct: 74 NRNRLEGLYECVLCASCTGSCPQYWWNREQFLGPAVLLQSYRWLIEPLDRDYDSRVKMFE 133 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNPA A +IK M Sbjct: 134 HGPLVNFCHNIYNCSITCPKFLNPAYASKEIKRM 167 >gi|71407294|ref|XP_806126.1| succinate dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70869775|gb|EAN84275.1| succinate dehydrogenase, putative [Trypanosoma cruzi] Length = 186 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 48/94 (51%), Positives = 65/94 (69%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN +++LGPA+LLQ+YRWLI+ D R+ E Sbjct: 74 NRNRLEGLYECVLCASCTGSCPQYWWNREQFLGPAVLLQSYRWLIEPLDRDYDSRVKMFE 133 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNPA A +IK M Sbjct: 134 HGPLVNFCHNIYNCSITCPKFLNPAYASKEIKRM 167 >gi|56477984|ref|YP_159573.1| glycolate oxidase iron-sulfur subunit [Aromatoleum aromaticum EbN1] gi|56314027|emb|CAI08672.1| glycolate oxidase (Iron-sulfur subunit) protein [Aromatoleum aromaticum EbN1] Length = 415 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E R+ L CV C C+ +CP+Y D GP + + L++ Sbjct: 2 QTQLADFIKDTPEGREAEAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQLLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D + RL L RC T C +CP G+ + A I L++ ++ Sbjct: 62 HDVTEKTRL-------HLDRCLTCRACETTCPSGVQYGRL-ADIGRHLVEARV 106 >gi|193083759|gb|ACF09446.1| sulfite reductase [NADPH] flavoprotein alpha-component [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 662 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 81/221 (36%), Gaps = 17/221 (7%) Query: 13 KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 + G T E E I+R+NP + ++ VL+ L +K D Sbjct: 306 EDGFAVPNITTEAIQVEINIFRYNPVTAASGR--DTWICALPGHMSVLEALRVLKATHDG 363 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLV 126 +LT R + + ++++G L + + + + PLP V++DLV Sbjct: 364 SLTFRDGTCD--DPTTAISVNGRLVLPGNVRLDSVAPTRDGGLRLRIEPLPAFDVLRDLV 421 Query: 127 VDMSHFYSQHRSIEPWL-----KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 VD + S +PW+ + + + + SC Sbjct: 422 VDHWTLERKRESAKPWMVAATREGADTAQGVMGTMDPVTATSLHSMTDFSSAPL-LHSCS 480 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDP 221 +S+ YLGP++L+ A+ + D R + + L + D Sbjct: 481 DATPHSEEYLGPSVLVGAWARIHDPRTADSNRKVLQTVIDS 521 >gi|320450063|ref|YP_004202159.1| iron-sulfur protein [Thermus scotoductus SA-01] gi|320150232|gb|ADW21610.1| iron-sulfur protein [Thermus scotoductus SA-01] Length = 661 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 14/152 (9%) Query: 116 LPHMSVIKDLVVDMSHF---YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYEC 170 LP+ K + + M + Q + + K + ED Y C Sbjct: 225 LPYFPRSKHIHLMMGPINLAFRQEKPGALLPLDFEKEEEKFGAEKLEDLSWKRLLDAYAC 284 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPFR 223 +MC C +CP+Y + L PA ++ + R+ ++ S E +D + Sbjct: 285 IMCNRCQEACPAYAT--GKALSPAAIVISERYELNGILPAFASGQESPRPLMDFALNEEA 342 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T M C + CP G P I ++ + Sbjct: 343 LWACTTCMACVEVCPVGNEPMLHILDVRRAKV 374 >gi|71744702|ref|XP_826981.1| succinate dehydrogenase [Trypanosoma brucei TREU927] gi|70831146|gb|EAN76651.1| succinate dehydrogenase, putative [Trypanosoma brucei] gi|261331246|emb|CBH14236.1| succinate dehydrogenase, putative [Trypanosoma brucei gambiense DAL972] Length = 188 Score = 85.2 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 46/94 (48%), Positives = 63/94 (67%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R +++GLYECV+CA C+ SCP YWWN + +LGPA+LLQ+YRWLI+ D R+ E Sbjct: 74 NRNRLEGLYECVLCASCTGSCPQYWWNRELFLGPAVLLQSYRWLIEPLDRDFDSRVKMFE 133 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + CH I NC+ +CPK LNP A +IK + Sbjct: 134 HGPLVNFCHNIFNCSITCPKFLNPGMASKEIKRL 167 >gi|91772171|ref|YP_564863.1| succinate dehydrogenase subunit B [Methanococcoides burtonii DSM 6242] gi|91711186|gb|ABE51113.1| Protein with C-terminal fumarate reductase-like domain [Methanococcoides burtonii DSM 6242] Length = 180 Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 5/154 (3%) Query: 77 RRSCREGICGSCGMNIDGTN--TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 R +C+ I + N L K + I + PLP + VI+DLVVDM FYS Sbjct: 8 RLACKMQISEMRKEPTNEENLEVLITNKRTELDNSVILIEPLPTLRVIRDLVVDMEPFYS 67 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 I+PWL+ P KE L + + KI+ C++CA C SCP +Y GPA Sbjct: 68 LVEDIKPWLEMKENVPEKENLIDRDTQVKIEQYTNCILCALCHGSCPV-AAKDKQYYGPA 126 Query: 195 ILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYR 226 L +A+R+ +D R +E + E + ++ + Sbjct: 127 ALAKAWRFYLDPREKEESKQECIAIVDSESGVGG 160 >gi|119897292|ref|YP_932505.1| glycolate oxidase iron-sulfur subunit [Azoarcus sp. BH72] gi|119669705|emb|CAL93618.1| probable glycolate oxidase iron-sulfur subunit [Azoarcus sp. BH72] Length = 414 Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E R+ + L +CV C C+ +CP+Y D GP + + L++ Sbjct: 2 QTQLADFIRDTPEGREADEILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQLLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + RL L RC T C +CP G++ ++ A I L+++++ Sbjct: 62 QPVTEKTRL-------HLDRCLTCRACETTCPSGVHYSRL-ADIGRHLVEQRV 106 >gi|86141378|ref|ZP_01059924.1| hypothetical protein MED217_05152 [Leeuwenhoekiella blandensis MED217] gi|85831937|gb|EAQ50392.1| hypothetical protein MED217_05152 [Leeuwenhoekiella blandensis MED217] Length = 447 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 13/149 (8%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V ++ + M + E + P + ++ Y C C C++ C Sbjct: 266 VTNEVKLMMDPDADPYAMPEEGAEEEVPAKFGASEATDLSWAQLLNAYTCTECGRCTSEC 325 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLEDP----FRLYRCHT 229 P+ + L P ++ A R ID+ E L D L+ C T Sbjct: 326 PANQT--GKKLSPRRIMMATRDRIEDIGKNIDANKGTFKEDGKQLLDDYISREELWACTT 383 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++CP G+NP I ++ L+ + Sbjct: 384 CNACVEACPVGINPLSIIMDMRQYLVMEQ 412 >gi|170516809|gb|ACB15211.1| assimilatory nitrate reductase large subunit [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 659 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 75/205 (36%), Gaps = 14/205 (6%) Query: 13 KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 + G E E I+R++P + +V VL+ L +K D Sbjct: 303 EDGFTVPETAAEAIQAEISIFRYDPVSATTGK--DTWVCALPGHMSVLESLRALKETHDG 360 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACV------KDMKDIKGAIAVYPLPHMSVIKDLV 126 TLT R + ++++G L ++D + + PLP V++DLV Sbjct: 361 TLTFRDGPSD--DPVTAISVNGRLILPGSVRLDSVAPIRDGGLRLRIEPLPSFDVVRDLV 418 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS----TSCPS 182 VD S +PW+ + + A + CS SC Sbjct: 419 VDHWPLERGRESSKPWMVAATREGADTAQGVVGTMDPSTADILHSITDFCSAPLLHSCSD 478 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSR 207 +S+ YLGPA+L + + + D R Sbjct: 479 ATPHSEAYLGPAVLARTWARINDPR 503 >gi|301063649|ref|ZP_07204162.1| 2Fe-2S iron-sulfur cluster binding domain protein [delta proteobacterium NaphS2] gi|300442246|gb|EFK06498.1| 2Fe-2S iron-sulfur cluster binding domain protein [delta proteobacterium NaphS2] Length = 127 Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 26 NLKEYRIYRWNP-DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 ++ I+R+NP D + NP DT++++ + + + L I+ + DP+L CR GI Sbjct: 3 RRLQFDIFRYNPRDPRSNPHTDTFHLEETDSMTIYI-ALNKIREEKDPSLQFDFCCRAGI 61 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 CG+C M I+G LAC +K++ I + PLP ++ S+H Sbjct: 62 CGACAMVINGRPGLACKTLIKELPDHITLMPLPVFKLVGGPFRGYGDLVSRHER 115 >gi|301063650|ref|ZP_07204163.1| fumarate reductase iron-sulfur subunit [delta proteobacterium NaphS2] gi|300442247|gb|EFK06499.1| fumarate reductase iron-sulfur subunit [delta proteobacterium NaphS2] Length = 130 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-GE 213 ++ ++I L CV C CC SC + D ++G L + R+++D RD + E Sbjct: 19 RMDNDKAEEIYELERCVECGCCVASCGTANMRED-FVGAVALNRIARFMLDPRDNRKNKE 77 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + ++ C ++ C CPK L + ++ + Sbjct: 78 YFEVIGTDEGIFGCMGLLACEDVCPKELPLQDQLGILRRKM 118 >gi|304305685|dbj|BAJ15131.1| succinate dehydrogenase iron-sulphur subunit [Podosphaera xanthii] gi|304305687|dbj|BAJ15132.1| succinate dehydrogenase iron-sulphur subunit [Podosphaera xanthii] Length = 58 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 38/58 (65%), Positives = 47/58 (81%) Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CPSYWWNS+ YLGPA+L+Q+YRWL DSRDE ER L++ LYRCHTI+NCT++C Sbjct: 1 CPSYWWNSEEYLGPAVLMQSYRWLADSRDEKTEERKSALDNSMSLYRCHTILNCTRTC 58 >gi|307544175|ref|YP_003896654.1| glycolate oxidase iron-sulfur subunit [Halomonas elongata DSM 2581] gi|307216199|emb|CBV41469.1| glycolate oxidase iron-sulfur subunit [Halomonas elongata DSM 2581] Length = 410 Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ L+ R+ L CV C C+ +CP+Y D GP + + L++S Sbjct: 2 QTHFTEQDLEQPHLREAERVLRTCVHCGFCNATCPTYQLLGDERDGPRGRIYLMKTLLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ E L RC + NC +CP G+ K + I ++R++ Sbjct: 62 RDDDHQ---ATEETRLHLDRCLSCRNCETTCPSGVEYHKLL-DIGRAEIERRV 110 >gi|218296638|ref|ZP_03497356.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermus aquaticus Y51MC23] gi|218242951|gb|EED09484.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermus aquaticus Y51MC23] Length = 661 Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 14/152 (9%) Query: 116 LPHMSVIKDLVVDMSHF---YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYEC 170 LP+ K + + M+ + + + + + K + ED Y C Sbjct: 225 LPYFPRSKHIHLMMAPINLAFGKEKPGALVPLDLEKEEEKFGAEKLEDLSWKRLLDAYAC 284 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPFR 223 +MC C +CP+Y + L PA +L + R+ ++ S E ++ + Sbjct: 285 IMCNRCQEACPAYTT--GKALSPAAILISERYELNEILPEFASGKESPRPLMEFALNEEA 342 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T M C + CP G P I ++ + Sbjct: 343 LWACTTCMACVEVCPVGNEPMLHILDVRRAKV 374 >gi|92114807|ref|YP_574735.1| glycolate oxidase iron-sulfur subunit [Chromohalobacter salexigens DSM 3043] gi|91797897|gb|ABE60036.1| protein of unknown function DUF224, cysteine-rich region [Chromohalobacter salexigens DSM 3043] Length = 419 Score = 82.5 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L+ R+ L CV C C+ +CP+Y D GP + + L++S Sbjct: 2 QTNFSDEALRQPHIREADRVLRSCVHCGFCNATCPTYQLLGDERDGPRGRIYLMKELLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ E L RC + NC +CP G+ K + I +DR++ Sbjct: 62 RDDDDQ---VTHETQTHLDRCLSCRNCETTCPSGVEYHKLL-DIGRAEVDRRV 110 >gi|225012974|ref|ZP_03703391.1| Fe-S oxidoreductase-like protein [Flavobacteria bacterium MS024-2A] gi|225002873|gb|EEG40852.1| Fe-S oxidoreductase-like protein [Flavobacteria bacterium MS024-2A] Length = 438 Score = 82.5 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 26/164 (15%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 + P V ++ ++ +I + K + + ++ Y C Sbjct: 250 NLNPRGKFPVDFNIKGEVQMMMDPSGAIPEGNTSPPEKFGASDVFDL-NWVQLMNAYSCT 308 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF--------------QGERLDN 217 C C+++CP+ + L P + ++D+RD + + Sbjct: 309 ECGRCTSACPANLT--GKKLSPR------KIMMDTRDRLEEVGKNLNENKGVFKADEKQL 360 Query: 218 LED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L D P L+ C + C ++CP ++P I ++ L+ K Sbjct: 361 LNDFITPEELWACTSCNACVEACPIEIDPLSIIMDMRQYLVMEK 404 >gi|255534298|ref|YP_003094669.1| transmembrane [4Fe-4S] cluster-binding oxidoredu ctase [Flavobacteriaceae bacterium 3519-10] gi|255340494|gb|ACU06607.1| transmembrane [4Fe-4S] cluster-binding oxidoredu ctase [Flavobacteriaceae bacterium 3519-10] Length = 442 Score = 82.1 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 24/154 (15%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V +++ + M + + P+ ++ ++ Y C C C+ C Sbjct: 263 VTQEIKLMMDPNADPYAAAPEADPNAVPEKFGADDIFDLNQVQLLNAYSCTECGRCTAVC 322 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------------ERLDNLEDP---FRL 224 P+ + L P + ++D+RD + + ++D + Sbjct: 323 PANIT--GKKLSPR------KIMMDTRDRLEEVGKNINKNGKFVDDGKKLIDDHIQREEI 374 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C T C ++CP ++P I +++ L+ + Sbjct: 375 WACTTCNACVEACPVLIDPLSIIMEMRRFLVMEQ 408 >gi|55981086|ref|YP_144383.1| iron-sulfur protein [Thermus thermophilus HB8] gi|55772499|dbj|BAD70940.1| iron-sulfur protein [Thermus thermophilus HB8] Length = 661 Score = 82.1 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDN 217 +++ Y C+MC C +CP+Y + L PA +L + R+ ++ R E Sbjct: 275 WKRLLDAYACIMCNRCQEACPAYAT--GKALSPAAILISERYELNEILPRFAQGEESPRP 332 Query: 218 LED----PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L D L+ C T + C + CP G P I ++ + Sbjct: 333 LMDFALNEEALWACTTCLACVEVCPVGNEPMLHILDVRRAKV 374 >gi|256820940|ref|YP_003142219.1| Fe-S oxidoreductase N-terminal region [Capnocytophaga ochracea DSM 7271] gi|256582523|gb|ACU93658.1| Fe-S oxidoreductase N-terminal region [Capnocytophaga ochracea DSM 7271] Length = 436 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 13/156 (8%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECV 171 + PL V + ++ + + +P + ++ Y C Sbjct: 250 IRPLGASKVNPAVTQEVKLMLDPNADPFATPQDTAPPDKFGASDVTDLTWLQLMNAYTCT 309 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLED---P 221 C C+ CP+ + L P ++ R ID F+ + L D P Sbjct: 310 ECGRCTDECPANLT--GKKLSPRAIMMKTRDRLEEVGRNIDKHGTFEPDGKQLLGDYITP 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ C T C + CP ++P I ++ L+ Sbjct: 368 EELWACTTCNACVEVCPVSISPLSIIMDMRQYLVME 403 >gi|260062563|ref|YP_003195643.1| hypothetical protein RB2501_13269 [Robiginitalea biformata HTCC2501] gi|88784130|gb|EAR15300.1| hypothetical protein RB2501_13269 [Robiginitalea biformata HTCC2501] Length = 440 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 21/163 (12%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED--RQKIDGLYE 169 V P + ++ + +++ + PAK D R ++ Y Sbjct: 249 RVKPQGAFNNLESVQKEVALMMDPEADPYAAPLDDAEPPAKFGASDVMDLSRIQLLNAYT 308 Query: 170 CVMCACCSTSCPSYWWNSD--------------RYLGPAILLQAYRWLIDSRDEFQGERL 215 C C C++ CP+ +G I W D R + L Sbjct: 309 CTECGRCTSECPANQTGKKLSPRKIMMDTRDRLEEVGRKIEANNGTWEPDGR-----QLL 363 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+ L+ C T C ++CP ++P I ++ L+ + Sbjct: 364 DDYITREELWACTTCNACVEACPVSIDPLSIIMDMRRYLVMEQ 406 >gi|86133692|ref|ZP_01052274.1| putative iron-sulphur-binding reductase [Polaribacter sp. MED152] gi|85820555|gb|EAQ41702.1| putative iron-sulphur-binding reductase [Polaribacter sp. MED152] Length = 438 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 25/155 (16%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V ++ + M + E + P+ + ++ Y C C C+++C Sbjct: 257 VTNEVKLMMDPDADPYAMPEEGAEETVPEKFGASDVADLSWVQLLNAYTCTECGRCTSAC 316 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD--------------EFQGERLDNLED---PFR 223 P+ + L P + ++D+RD EF+ + L D P Sbjct: 317 PANLT--GKKLSPR------KIMMDTRDRLEEVGRNIDENKGEFKDDGKQLLNDYITPEE 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + C + CP ++P I ++ L+ + Sbjct: 369 LWACTSCNACVEECPVNIDPLSIIMDMRRYLVMEQ 403 >gi|332290726|ref|YP_004429335.1| iron-sulfur protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168812|gb|AEE18067.1| iron-sulfur protein [Krokinobacter diaphorus 4H-3-7-5] Length = 448 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 25/115 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG------- 212 + ++ Y C C C++ CP+ + L P + ++D+RD + Sbjct: 306 NWVQLMNSYSCTECGRCTSECPANQT--GKKLSPR------KIMMDTRDRLEEVGKNIDE 357 Query: 213 ----------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + LD+ L+ C T C ++CP G++P I ++ ++ Sbjct: 358 NNGVFVMDNKQLLDDYITKEELWACTTCNACVEACPIGIDPLSIIIDMRRYMVME 412 >gi|315427993|dbj|BAJ49582.1| Fe-S oxidoreductase [Candidatus Caldiarchaeum subterraneum] Length = 669 Score = 82.1 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDN 217 + GL C C C +CP+Y + L P ++Q R W D DE Sbjct: 285 WMEKLGLDACTDCGRCEAACPAYAAGTP--LSPRDIVQKLRRQLWRGDGLDE--DVFASG 340 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-LDRKI 259 L D ++ C T C ++CP + P I +++ L L+ K+ Sbjct: 341 LIDEEEVWACTTCSACIEACPVLIRPMDYILEMRRALTLEGKL 383 >gi|315425177|dbj|BAJ46847.1| Fe-S oxidoreductase [Candidatus Caldiarchaeum subterraneum] Length = 610 Score = 82.1 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDN 217 + GL C C C +CP+Y + L P ++Q R W D DE Sbjct: 226 WMEKLGLDACTDCGRCEAACPAYAAGTP--LSPRDIVQKLRRQLWRGDGLDE--DVFASG 281 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-LDRKI 259 L D ++ C T C ++CP + P I +++ L L+ K+ Sbjct: 282 LIDEEEVWACTTCSACIEACPVLIRPMDYILEMRRALTLEGKL 324 >gi|193084202|gb|ACF09866.1| succinate dehydrogenase iron-sulfur protein [uncultured marine group II euryarchaeote KM3-136-D10] Length = 647 Score = 81.7 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 87/230 (37%), Gaps = 22/230 (9%) Query: 11 RVKRGKIWNAPT--GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKN 68 + G ++ P GE+ R++R++P + + + VL+ L +K Sbjct: 287 KATAGSAFDIPELVGEEIQVNARVFRYDPKSGQSGH--DIWRCAVPGSVSVLELLRLLKA 344 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACVK------DMKDIKGAIAVYPLPHMSVI 122 D +LT R + + ++ +G N L KD + ++ + PL VI Sbjct: 345 TEDGSLTFRDGNAD--DPTTAISANGRNILPGRVAISEIVRDKDGESSLRIDPLSGFDVI 402 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +DL VD S + + +PW+ + + K E + A SC Sbjct: 403 RDLAVDHSDYQIHLANSKPWMHATTREGTKVSQGIIG--TMDAVTAETLHSASDFPSCQL 460 Query: 183 YWWNSDR------YLGPAILLQAYRWLIDSRD--EFQGERLDNLEDPFRL 224 +SD Y+GPA++ + + D R + + L +E + Sbjct: 461 LHASSDTVPHNRSYIGPAVISRLWARYNDPRTSQKGKDGYLATIESENGI 510 >gi|295134582|ref|YP_003585258.1| transmembrane [Zunongwangia profunda SM-A87] gi|294982597|gb|ADF53062.1| transmembrane [Zunongwangia profunda SM-A87] Length = 446 Score = 81.7 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 24/154 (15%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + + P+ ++ ++ Y C C C+ C Sbjct: 266 VKKEVALMMDPNADPFAAPAEGEEEGEPEKFGASDVMDLNQVQLLNSYTCTECGRCTAEC 325 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD----------------EFQGERLDNLEDPFRL 224 P+ + L P + ++D+RD + + LD+ L Sbjct: 326 PANQT--GKKLSPR------KIMMDTRDRLEEVGEIINKNGKFEDDGKQLLDDYILREEL 377 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C T C ++CP G++P I ++ L+ + Sbjct: 378 WACTTCNACVEACPVGIDPLSIILDMRRYLVMEQ 411 >gi|227501960|ref|ZP_03932009.1| Fe-S oxidoreductase [Corynebacterium accolens ATCC 49725] gi|227077244|gb|EEI15207.1| Fe-S oxidoreductase [Corynebacterium accolens ATCC 49725] Length = 1014 Score = 81.7 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F+ ++ S E LK++ +E + + + C C C CP+ WN+D Sbjct: 236 FNIFFQRNTSGEKALKSLPTPDLEEEITPG-SWKMLLDSTACTECGRCQELCPA--WNTD 292 Query: 189 RYLGPAILL----QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L P ++ QA + + + + D L+ C C CP + Sbjct: 293 KPLSPKKVMMDLRQAALDNYNPHEGLDVLSMAGVIDDDVLWSCTNCGACVDQCPTDIEHI 352 Query: 245 KAIAKIKM 252 IA ++ Sbjct: 353 DHIADLRR 360 >gi|78223471|ref|YP_385218.1| hypothetical protein Gmet_2267 [Geobacter metallireducens GS-15] gi|78194726|gb|ABB32493.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 692 Score = 81.7 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 5/104 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW-NSDRYLGPAILLQAYRWLIDSR---DEFQGERL- 215 + + Y CV C CS +CP+ +I + Y + Q ERL Sbjct: 298 WKHMLDFYSCVDCGRCSDNCPANAVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLI 357 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ C T C + CP + I ++ ++D + Sbjct: 358 GTVLHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEGM 401 >gi|86132288|ref|ZP_01050883.1| putative iron-sulfur-binding reductase [Dokdonia donghaensis MED134] gi|85817207|gb|EAQ38390.1| putative iron-sulfur-binding reductase [Dokdonia donghaensis MED134] Length = 448 Score = 81.7 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 25/115 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG------- 212 + ++ Y C C C++ CP+ + L P + ++D+RD + Sbjct: 306 NWVQLMNSYSCTECGRCTSECPANQT--GKKLSPR------KIMMDTRDRLEEVGKNIDS 357 Query: 213 ----------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + LD+ L+ C T C ++CP G++P I ++ ++ Sbjct: 358 NNGVFVPDNKQLLDDYITKEELWACTTCNACVEACPIGIDPLSIIVDMRRYMVME 412 >gi|89890703|ref|ZP_01202212.1| iron-sulphur-binding oxidoreductase (ferredoxin) [Flavobacteria bacterium BBFL7] gi|89516848|gb|EAS19506.1| iron-sulphur-binding oxidoreductase (ferredoxin) [Flavobacteria bacterium BBFL7] Length = 447 Score = 81.7 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 12/106 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQG 212 D+ ++ Y C C C++ CP+ + L P ++ R +I+ E++ Sbjct: 306 DQVQLLNAYTCTECGRCTSECPANIT--GKKLSPRAIMMKTRDRLEEVGAVINKEGEWKD 363 Query: 213 ERLDNLEDP---FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L D L+ C T C ++CP G++P I ++ L+ Sbjct: 364 DGKKLLNDHITTEELWACTTCNACVEACPIGIDPLSIIMDMRRYLV 409 >gi|311740429|ref|ZP_07714257.1| iron-sulfur-binding reductase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304475|gb|EFQ80550.1| iron-sulfur-binding reductase [Corynebacterium pseudogenitalium ATCC 33035] Length = 969 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 7/128 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F+ ++ + E L+++ +E + + + C C C CP+ WN++ Sbjct: 236 FNIFFQRNATGEKALQSLPTPDLEEDITPG-SWKMLLDSTSCTECGRCQELCPA--WNTE 292 Query: 189 RYLGPAILLQAYRW----LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L P + R + + + + D L+ C C CP + Sbjct: 293 KPLSPKKFMMDLRQGALDNYNPHEGLDVLSMAGVIDDDVLWSCTNCGACVDQCPTDIEHI 352 Query: 245 KAIAKIKM 252 IA ++ Sbjct: 353 DHIADLRR 360 >gi|315224140|ref|ZP_07865980.1| Fe-S oxidoreductase N-terminal domain protein [Capnocytophaga ochracea F0287] gi|314945873|gb|EFS97882.1| Fe-S oxidoreductase N-terminal domain protein [Capnocytophaga ochracea F0287] Length = 436 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 13/156 (8%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECV 171 + PL V + ++ + + +P + ++ Y C Sbjct: 250 IRPLGASKVNPVVTQEVKLMLDPNADPFATPQDTAPPDKFGASDVTDLTWLQLMNAYTCT 309 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLED---P 221 C C+ CP+ + L P ++ R ID F+ + L D P Sbjct: 310 ECGRCTDECPANLT--GKKLSPRAIMMKTRDRLEEVGRNIDKHGTFEPDGKQLLGDYITP 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ C T C + CP ++P I ++ L+ Sbjct: 368 EELWACTTCNACVEVCPVSISPLSIIMDMRQYLVME 403 >gi|255325590|ref|ZP_05366690.1| iron-sulfur cluster-binding protein [Corynebacterium tuberculostearicum SK141] gi|255297378|gb|EET76695.1| iron-sulfur cluster-binding protein [Corynebacterium tuberculostearicum SK141] Length = 887 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 7/128 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F+ ++ + E L+ + +E + + + C C C CP+ WN++ Sbjct: 236 FNIFFQRNATGEKALQELPTPDLEEDITPG-SWKMLLDSTSCTECGRCQELCPA--WNTE 292 Query: 189 RYLGPAILLQAYRW----LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L P ++ R + + + + D L+ C C CP + Sbjct: 293 KPLSPKKVMMDLRQGALDNYNPHEGLDVLSMAGVIDDDVLWSCTNCGACVDQCPTDIEHI 352 Query: 245 KAIAKIKM 252 IA ++ Sbjct: 353 DHIADLRR 360 >gi|300021731|ref|YP_003754342.1| electron transfer flavoprotein alpha/beta-subunit [Hyphomicrobium denitrificans ATCC 51888] gi|300022067|ref|YP_003754678.1| electron transfer flavoprotein alpha/beta-subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299523552|gb|ADJ22021.1| Electron transfer flavoprotein alpha/beta-subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299523888|gb|ADJ22357.1| Electron transfer flavoprotein alpha/beta-subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 1065 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 5/101 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L C C C +CP+ L P + R D LD + Sbjct: 295 WKDMLHLDACTKCGRCHEACPARTAGYP--LSPRDFILDLRAYNDEAKGCSSPALDLVGG 352 Query: 221 ---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 P L+ C T C + CP G+ I +++ L+++ Sbjct: 353 VIAPETLWACRTCGACQEICPVGIEHPSLIVRMRRHLVEQG 393 >gi|260219812|emb|CBA26720.1| Glycolate oxidase iron-sulfur subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 411 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTHLAPEYQNTADGQAAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L RC T NC +CP G++ + I L+D K+ Sbjct: 62 QEPTRA-------TQMHLDRCLTCRNCESTCPSGVDYG-HLVDIGRKLVDAKV 106 >gi|134093567|ref|YP_001098642.1| glycolate oxidase iron-sulfur subunit [Herminiimonas arsenicoxydans] gi|133737470|emb|CAL60513.1| Glycolate oxidase iron-sulfur subunit [Herminiimonas arsenicoxydans] Length = 410 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + E R+ L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIKDTREGREADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + I I +++ ++ Sbjct: 62 KTPTAKTQL-------HLDRCLTCRNCETTCPSGVQYGRLI-DIGRKVVEERV 106 >gi|119385746|ref|YP_916801.1| succinate dehydrogenase (ubiquinone) [Paracoccus denitrificans PD1222] gi|119376341|gb|ABL71105.1| succinate dehydrogenase subunit B [Paracoccus denitrificans PD1222] Length = 122 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 68/103 (66%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 DT+ DLD+CGP+ LD L++IKN+IDPTLT RRSCREG+CGSC M ID TN AC Sbjct: 5 RRDTFRDDLDDCGPIPLDALIWIKNRIDPTLTFRRSCREGVCGSCAMTIDATNWTACTWA 64 Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 + D ++ L ++ IK+LV D +H +Q+ IEPWL Sbjct: 65 IADRAKPATIFLLANLPAIKELVPDQTHLLAQYEMIEPWLNPG 107 >gi|149372820|ref|ZP_01891841.1| possible oxidoreductase, Fe-S subunit [unidentified eubacterium SCB49] gi|149354517|gb|EDM43082.1| possible oxidoreductase, Fe-S subunit [unidentified eubacterium SCB49] Length = 435 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 56/158 (35%), Gaps = 25/158 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + +V K++ + M + + P + ++ Y C C C+ Sbjct: 252 NEAVTKEVKMMMDPNVDPFAAPPAGEEQAVPAKFGASDVMDLSQVQLLNAYTCTECGRCT 311 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-----------------ERLDNLED 220 + CP+ + L P + ++D+RD + + L + Sbjct: 312 SDCPANIT--GKKLSPR------KIMMDTRDRLEEVGKNIDANKGVFVPDNKQLLGDYIS 363 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + C ++CP ++P I +++ L+ K Sbjct: 364 EEELWACTSCNACVEACPVSIDPLSIIMEMRQYLVMEK 401 >gi|213423162|ref|ZP_03356177.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 58 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/58 (56%), Positives = 43/58 (74%) Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 SCPS+WWN D+++GPA LL AYR+LIDSRD RL+ + D F ++RCH+IMNC Sbjct: 1 SCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSV 58 >gi|146302310|ref|YP_001196901.1| Fe-S oxidoreductase-like protein [Flavobacterium johnsoniae UW101] gi|146156728|gb|ABQ07582.1| Fe-S oxidoreductase-like protein [Flavobacterium johnsoniae UW101] Length = 443 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 26/155 (16%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + + +P + ++ Y C C C++SC Sbjct: 263 VTKEVKLMMDPNADPFAAAPV-DENAAPSKFGASDVQDLNWVQLLNAYTCTECGRCTSSC 321 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-----------------ERLDNLEDPFR 223 P+ + L P + ++D+RD Q L++ P Sbjct: 322 PANQT--GKKLSPR------KIMMDTRDRLQEVGKNIDANKGVFVPDNKTLLNDYITPEE 373 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + C + CP ++P I ++ L+ + Sbjct: 374 LWACTSCNACVEECPVNISPLSIIMDMRRYLVMEQ 408 >gi|213584921|ref|ZP_03366747.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 56 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/54 (57%), Positives = 37/54 (68%) Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 IDSRD RL+ + D F ++RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 1 IDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 54 >gi|325287502|ref|YP_004263292.1| hypothetical protein Celly_2604 [Cellulophaga lytica DSM 7489] gi|324322956|gb|ADY30421.1| hypothetical protein Celly_2604 [Cellulophaga lytica DSM 7489] Length = 444 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 25/116 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG------- 212 + ++ Y C C C++ CP+ + L P + ++D+RD Q Sbjct: 302 NWVQLLNSYTCTECGRCTSECPANQT--GKLLSPR------KIMMDTRDRLQEVGNNIDK 353 Query: 213 ----------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L + L+ C + CT++CP ++P I ++ L+ + Sbjct: 354 NKGEFVADGKQLLGDYITEEELWACTSCNACTEACPVSIDPLSIIMDMRRYLVMEQ 409 >gi|306837033|ref|ZP_07469979.1| iron-sulfur cluster-binding protein [Corynebacterium accolens ATCC 49726] gi|304567094|gb|EFM42713.1| iron-sulfur cluster-binding protein [Corynebacterium accolens ATCC 49726] Length = 978 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 7/128 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F+ ++ S + LK++ +E + + + C C C CP+ WN+D Sbjct: 236 FNIFFQRNTSGDKALKSLPTPDLEEDITPG-SWKMLLDSTACTECGRCQELCPA--WNTD 292 Query: 189 RYLGPAILLQAYRW----LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L P ++ R + + + + D L+ C C CP + Sbjct: 293 KPLSPKKVMMDLRQGALDNYNPHEGLDVLSMAGVIDDDVLWSCTNCGACVDQCPTDIEHI 352 Query: 245 KAIAKIKM 252 IA ++ Sbjct: 353 DHIADLRR 360 >gi|298208777|ref|YP_003716956.1| iron-sulfur protein [Croceibacter atlanticus HTCC2559] gi|83848704|gb|EAP86573.1| iron-sulfur protein [Croceibacter atlanticus HTCC2559] Length = 443 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 24/115 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD----------- 208 + ++ Y C C C++ CP+ + L P + ++D+RD Sbjct: 302 NWVQLLNSYTCTECGRCTSECPANQT--GKKLSPR------KIMMDTRDRLEEVGENINK 353 Query: 209 -----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + LD+ L+ C T C ++CP G++P I ++ L+ + Sbjct: 354 NGTFEDDGKQLLDDYILREELWACTTCNACVEACPIGIDPLSIIMDMRRYLVMEQ 408 >gi|94967492|ref|YP_589540.1| hypothetical protein Acid345_0461 [Candidatus Koribacter versatilis Ellin345] gi|94549542|gb|ABF39466.1| protein of unknown function DUF224 [Candidatus Koribacter versatilis Ellin345] Length = 703 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 4/100 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQA-YRWLIDSRDEFQGERLD 216 + + Y C C CS +CP+ R+L R+ I + + Sbjct: 292 WKHLLDFYSCADCGRCSDNCPANAAGRRLSPRFLTIQARDYIFARYTIFGKPVPDMALVG 351 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 N+ ++ C T C + CP + I ++ L++ Sbjct: 352 NVYSADEIWSCTTCGACEEECPMQIEYIDKIVDMRRALVE 391 >gi|88803692|ref|ZP_01119216.1| iron-sulfur oxidoreductase [Polaribacter irgensii 23-P] gi|88780425|gb|EAR11606.1| iron-sulfur oxidoreductase [Polaribacter irgensii 23-P] Length = 438 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 25/109 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF--------------Q 211 Y C C C+++CP+ + L P + ++D+RD + Sbjct: 302 NAYTCTECGRCTSACPANLT--GKKLSPR------KIMMDTRDRMEEVGRNIDANGGTFK 353 Query: 212 GERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + L D P L+ C + C + CP ++P I ++ L+ Sbjct: 354 EDGKQLLNDYILPEELWACTSCNACVEECPVNIDPLSIIMDMRRYLVME 402 >gi|330822876|ref|YP_004386179.1| hypothetical protein Alide2_0233 [Alicycliphilus denitrificans K601] gi|329308248|gb|AEB82663.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicycliphilus denitrificans K601] Length = 412 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLAPEYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + +L L RC T NC +CP G+ + I +++ K+ Sbjct: 62 QEPTRKTQL-------HLDRCLTCRNCESTCPSGVQYG-HLVDIGRRIVEEKV 106 >gi|326799766|ref|YP_004317585.1| hypothetical protein Sph21_2361 [Sphingobacterium sp. 21] gi|326550530|gb|ADZ78915.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sphingobacterium sp. 21] Length = 431 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + Y C C C+ CP+ + L P + ++D+RD Sbjct: 291 WKNLLDAYTCTECGRCTAVCPANIT--GKLLSPR------KIMMDTRDRMVEVGKQIDKN 342 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E LD L+ C + CT++CP +NP + I ++ ++ Sbjct: 343 GSFTEDGKSLLDTYISREELWACTSCNACTEACPVNINPLEIIMDMRRYIVME 395 >gi|319761018|ref|YP_004124955.1| hypothetical protein Alide_0286 [Alicycliphilus denitrificans BC] gi|317115579|gb|ADU98067.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicycliphilus denitrificans BC] Length = 412 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLAPEYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + +L L RC T NC +CP G+ + I +++ K+ Sbjct: 62 QEPTRKTQL-------HLDRCLTCRNCESTCPSGVQYG-HLVDIGRRIVEEKV 106 >gi|330720010|gb|EGG98451.1| hypothetical protein imdm_2358 [gamma proteobacterium IMCC2047] Length = 518 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 21/220 (9%) Query: 58 MVLDGLLYIKNKIDPTL-TLRRSCREGICGSCGMNIDGT-NTLACVKDMKDIKGA----- 110 L+ + + + DPT+ R G + G A M Sbjct: 176 FFLEAIRLVWLQGDPTVYNYRWWSPVGNAIAEVFKGLGMGPEGAGTMRMYLWWFHGLIAL 235 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYE 169 + +P + L S ++ + + + + + + + L Sbjct: 236 TFIAVIPRTKIKHVLTAMGSLAVRSDLPMQRLPEVDMDQEKIGYSKLTDFNFKNLLHLDA 295 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-----GERLDNLED---- 220 C C C +CP+ L P + R L + + E + E L L Sbjct: 296 CTKCGRCHEACPANATGYP--LSPRDFVLTLRELAEEKLEGKSMPENEEDLRALGTGMNQ 353 Query: 221 --PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP G+ I +++ L++ Sbjct: 354 VRSETLWSCRTCAACVEICPVGIEHVPMIVEMRRALIEEG 393 >gi|304305683|dbj|BAJ15130.1| succinate dehydrogenase iron-sulphur subunit [Podosphaera xanthii] Length = 58 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/58 (63%), Positives = 47/58 (81%) Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CPSYWWNS+ YLGPA+L+Q+YRWL DSRDE ER L++ LYRC+TI+NCT++C Sbjct: 1 CPSYWWNSEEYLGPAVLMQSYRWLADSRDEKTEERKSALDNSMSLYRCYTILNCTRTC 58 >gi|120608947|ref|YP_968625.1| glycolate oxidase iron-sulfur subunit [Acidovorax citrulli AAC00-1] gi|120587411|gb|ABM30851.1| protein of unknown function DUF224, cysteine-rich region domain protein [Acidovorax citrulli AAC00-1] Length = 419 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E R+ L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTRLAPEFQDTPEGREAEGILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L L RC T NC +CP G+ + + I +++ K+ Sbjct: 59 LEGETPTRKTQLH----LDRCLTCRNCETTCPSGVQYGRLV-DIGRRIVEDKV 106 >gi|326315119|ref|YP_004232791.1| hypothetical protein Acav_0301 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371955|gb|ADX44224.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 419 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E R+ L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTRLAPEFQDTPEGREAEGILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L L RC T NC +CP G+ + + I +++ K+ Sbjct: 59 LEGETPTRKTQLH----LDRCLTCRNCETTCPSGVQYGRLV-DIGRRIVEDKV 106 >gi|228472614|ref|ZP_04057374.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Capnocytophaga gingivalis ATCC 33624] gi|228276027|gb|EEK14783.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Capnocytophaga gingivalis ATCC 33624] Length = 433 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 13/109 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--------LIDSRDEFQG 212 R ++ Y C C C+ CP+ + L P ++ R ++ ++ F Sbjct: 293 RVQLLAAYACTECGRCTDECPANQT--GKLLSPRKIMMDTRRRAQEVSANILQNKGTFVP 350 Query: 213 ERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D P L+ C T C ++CP ++P I +++ ++ + Sbjct: 351 DQKALLGDYITPEELWACTTCAACVEACPMEISPLSIIVEMRRYIVMEQ 399 >gi|300786239|ref|YP_003766530.1| Fe-S oxidoreductase [Amycolatopsis mediterranei U32] gi|299795753|gb|ADJ46128.1| putative Fe-S oxidoreductase [Amycolatopsis mediterranei U32] Length = 700 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 16/109 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDS------ 206 + + C C C + CP+ WN+ + L P +++ R +++ Sbjct: 282 WKGMLDFATCTECGRCQSQCPA--WNTGKPLSPKLVIMNLRDNLFEEAPYILAGTEHEGA 339 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R E + DP L+ C T C + CP + I ++ + Sbjct: 340 RPLVGPEDDGGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 388 >gi|121592603|ref|YP_984499.1| glycolate oxidase iron-sulfur subunit [Acidovorax sp. JS42] gi|120604683|gb|ABM40423.1| protein of unknown function DUF224, cysteine-rich region domain protein [Acidovorax sp. JS42] Length = 412 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E ++ L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTQLAPQYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L L RC T NC +CP G+ + I +++ K+ Sbjct: 59 LEGAEPTRKTQLH----LDRCLTCRNCESTCPSGVQYG-HLVDIGRRIVEEKV 106 >gi|11498361|ref|NP_069589.1| heterodisulfide reductase, subunits E and D, putative [Archaeoglobus fulgidus DSM 4304] gi|2649852|gb|AAB90481.1| heterodisulfide reductase, subunits E and D, putative [Archaeoglobus fulgidus DSM 4304] Length = 654 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-----ERLDNLEDPFRL 224 C+ C C +CP++ NS L P L+Q R ++ + + G E + N+ D + Sbjct: 277 CMRCGRCQDNCPAF--NSGTTLSPMYLMQNLRRSLNQKSDITGNLGDFELVGNVLDEEAV 334 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C T C + CP + + I +++ L++ Sbjct: 335 WACTTCRACMEMCPVYIEQMEIIGEMRRGLVE 366 >gi|85059525|ref|YP_455227.1| putative fumarate reductase iron-sulfur protein subunit [Sodalis glossinidius str. 'morsitans'] gi|84780045|dbj|BAE74822.1| putative fumarate reductase iron-sulfur protein subunit [Sodalis glossinidius str. 'morsitans'] Length = 150 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 +K+ +I R++P+ P ++Y V D +LD L YIK+ + LT R SCR Sbjct: 2 ADKHPLTVQIQRYDPEKDRAPQWESYPVPWD-EQTSLLDALGYIKDHLAADLTFRWSCRM 60 Query: 83 GICGSCGMNIDGTNTLACVK 102 ICGSCGM ++ L C Sbjct: 61 AICGSCGMMVNDVPRLTCKT 80 >gi|120435991|ref|YP_861677.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Gramella forsetii KT0803] gi|117578141|emb|CAL66610.1| transmembrane [4Fe-4S] cluster-binding oxidoreductase [Gramella forsetii KT0803] Length = 446 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 24/153 (15%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + P ++ ++ Y C C C++ C Sbjct: 266 VKKEVDLMMDPNADPFAAPAEGEDEGEPDKFGASDIFDLNQVQLLNSYTCTECGRCTSEC 325 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD-------------EFQGERLDNLED---PFRL 224 P+ + L P + ++D+RD +F+ + L+D L Sbjct: 326 PANQT--GKKLSPR------KIMMDTRDRVEEVGEIINKNGKFEDDGKKLLDDYILREEL 377 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C T C ++CP G++P I ++ L+ Sbjct: 378 WACTTCNACVEACPIGIDPLSIILDMRRYLVME 410 >gi|319790921|ref|YP_004152561.1| hypothetical protein Varpa_0228 [Variovorax paradoxus EPS] gi|315593384|gb|ADU34450.1| protein of unknown function DUF224 cysteine-rich region domain protein [Variovorax paradoxus EPS] Length = 417 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E R+ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTELAPEFRDTDEGREAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC T NC +CP G+ + I ++D K+ Sbjct: 62 KAPTRSTQL-------HLDRCLTCRNCESTCPSGVQYGNLV-DIGRKIVDEKV 106 >gi|332880015|ref|ZP_08447699.1| hypothetical protein HMPREF9074_03465 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682011|gb|EGJ54924.1| hypothetical protein HMPREF9074_03465 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 437 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 12/156 (7%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + PL + V + ++ T P+ + ++ Y C Sbjct: 250 IQPLGALKVNPTVTREVKLMLDPTADPFAAQDTSPPEKFGASDVADLTWVQLMSAYTCTE 309 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLED---PF 222 C C+ CP+ + L P ++ R ID +F+ + L D Sbjct: 310 CGRCTDECPANLT--GKKLSPRAIMMKTRDRLEEVGKNIDKHGKFEDDGKQLLGDYITAE 367 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C ++CP ++P I +++ + + Sbjct: 368 ELWACTTCNACAEACPVSISPVSIIMELRQYSVMEQ 403 >gi|312889150|ref|ZP_07748708.1| protein of unknown function DUF224 cysteine-rich region domain protein [Mucilaginibacter paludis DSM 18603] gi|311298387|gb|EFQ75498.1| protein of unknown function DUF224 cysteine-rich region domain protein [Mucilaginibacter paludis DSM 18603] Length = 433 Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------- 212 + + Y C C C++ CP+ + L P + ++D+RD Sbjct: 293 WKNLMEAYTCTECGRCTSVCPANIT--GKLLSPR------KIMMDTRDRITEVGNNIDKH 344 Query: 213 --------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 LD ++ C T C ++CP +NP + I +++ ++ Sbjct: 345 GKDFKDEKSLLDTYITREEIWACTTCNACAEACPVNINPLEIITELRRYVVME 397 >gi|291296740|ref|YP_003508138.1| hypothetical protein Mrub_2367 [Meiothermus ruber DSM 1279] gi|290471699|gb|ADD29118.1| protein of unknown function DUF224 cysteine-rich region domain protein [Meiothermus ruber DSM 1279] Length = 683 Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 9/124 (7%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + + + ++ Y C+MC C CP+Y + L P+ L+ Sbjct: 260 AKDFEELEKLEKFGVAKLEDFTWPRLLDAYSCIMCNRCQEVCPAYTT--GKALSPSALII 317 Query: 199 AYRWLID-------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R+ ++ + E L+ + L+ C T C + CP G P I ++ Sbjct: 318 NERYELNQILPAFAAGQESPRPLLEFALNEEALWACTTCNACVEVCPVGNEPMLHILDVR 377 Query: 252 MMLL 255 + Sbjct: 378 REQV 381 >gi|256370875|ref|YP_003108699.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007459|gb|ACU53026.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 676 Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--LIDSRDEFQGE--RL 215 D + C C C CP+ W + + L P +L+ + R L + E + Sbjct: 275 DWKHRLDTLACTECGRCQELCPA--WGTGKPLSPKLLIMSLREAVLAHGANPEAQETSLV 332 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ DP L+ C T C +CP + I ++ + Sbjct: 333 PDVVDPEVLWACTTCGACVAACPVDIEHVDTIVDLRRYQV 372 >gi|163755175|ref|ZP_02162295.1| possible oxidoreductase, Fe-S subunit [Kordia algicida OT-1] gi|161324595|gb|EDP95924.1| possible oxidoreductase, Fe-S subunit [Kordia algicida OT-1] Length = 436 Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 25/155 (16%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + P+ + ++ Y C C C++ C Sbjct: 255 VTKEVKLMMDPNADPFAAPAEGEDEGEPEKFGASDVQDLNWVQLMNSYTCTECGRCTSEC 314 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD-----------------EFQGERLDNLEDPFR 223 P+ + L P + ++D+RD + L++ Sbjct: 315 PANLT--GKKLSPR------KIMMDTRDRLEEVGKNIDANNGTFVDDGKSLLNDYITTEE 366 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + C ++CP ++P I +++ L+ + Sbjct: 367 LWACTSCNACVEACPVNIDPLSIIMEMRKYLVMEQ 401 >gi|222109407|ref|YP_002551671.1| glycolate oxidase iron-sulfur subunit [Acidovorax ebreus TPSY] gi|221728851|gb|ACM31671.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax ebreus TPSY] Length = 412 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E ++ L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTQLAPQYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L L RC T NC +CP G+ + I +++ K+ Sbjct: 59 LEGAEPTRKTQLH----LDRCLTCRNCESTCPSGVQYG-HLVDIGRRIVEEKV 106 >gi|91214840|ref|ZP_01251813.1| iron-sulphur-binding reductase [Psychroflexus torquis ATCC 700755] gi|91187267|gb|EAS73637.1| iron-sulphur-binding reductase [Psychroflexus torquis ATCC 700755] Length = 446 Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 23/113 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---------- 209 + ++ Y C C C+ CP+ + L P + ++D+RD Sbjct: 307 NWFQLLSSYSCTECGRCTAECPASQT--GKKLSPR------KIMMDTRDRLEEVGKQLDK 358 Query: 210 -----FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 LD L+ C T C +CP G++P I ++ L+ Sbjct: 359 GEEVIDDKPLLDGYISREELWACTTCNACVDACPIGIDPMSIIMDMRQYLVME 411 >gi|239813243|ref|YP_002942153.1| glycolate oxidase iron-sulfur subunit [Variovorax paradoxus S110] gi|239799820|gb|ACS16887.1| protein of unknown function DUF224 cysteine-rich region domain protein [Variovorax paradoxus S110] Length = 410 Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + E R+ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTELAPEFRGTDEGREAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC T NC +CP G+ + I ++D K+ Sbjct: 62 KAPTRSTQL-------HLDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVDEKV 106 >gi|121603042|ref|YP_980371.1| glycolate oxidase iron-sulfur subunit [Polaromonas naphthalenivorans CJ2] gi|120592011|gb|ABM35450.1| protein of unknown function DUF224, cysteine-rich region domain protein [Polaromonas naphthalenivorans CJ2] Length = 415 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + + RQ L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTQLAPEFQNTPDGRQAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L L RC T NC +CP G+ + I L+D ++ Sbjct: 59 LEGETPTRKTQLH----LDRCLTCRNCESTCPSGVQYG-HLVDIGRKLVDERV 106 >gi|126663653|ref|ZP_01734649.1| possible oxidoreductase, Fe-S subunit [Flavobacteria bacterium BAL38] gi|126624236|gb|EAZ94928.1| possible oxidoreductase, Fe-S subunit [Flavobacteria bacterium BAL38] Length = 442 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 25/116 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD----------- 208 + ++ Y C C C++SCP+ + L P + ++D+RD Sbjct: 301 NWVQLLNAYSCTECGRCTSSCPANQT--GKKLSPR------KIMMDTRDRLEEVGRNIDL 352 Query: 209 ------EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L++ P L+ C T C + CP ++P I ++ L+ + Sbjct: 353 NKGVFVDDGKSLLNDYITPEELWACTTCNACVEECPINISPLSIIIDMRRYLVMEQ 408 >gi|327310844|ref|YP_004337741.1| Fumarate reductase iron-sulfur protein subunit B [Thermoproteus uzoniensis 768-20] gi|326947323|gb|AEA12429.1| Fumarate reductase iron-sulfur protein subunit B [Thermoproteus uzoniensis 768-20] Length = 101 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 4/102 (3%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + R+ R G + Y VD+D+ VLD L+ +K+ +D +L R +CR G+CG Sbjct: 2 IVTLRVRR---TRGGERYIQIYRVDVDDLRTTVLDLLIKVKDNLDGSLAFRYACRMGLCG 58 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 +C + I+G LAC + D+ I V P+ V+KDLVVD Sbjct: 59 ACTVKINGRPRLACATKIADVGTDITVEPV-ADKVVKDLVVD 99 >gi|227505852|ref|ZP_03935901.1| possible Fe-S dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227197550|gb|EEI77598.1| possible Fe-S dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 896 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 18/102 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER------ 214 + + C C C CP+ WN+++ L P ++++D RD Sbjct: 267 WKMLLDTTSCTECGRCQDLCPA--WNTEKPLSPK------KFVMDMRDAAVENYNPHEGV 318 Query: 215 ----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L N D L+ C C CP + IA ++ Sbjct: 319 NVLALANAIDDAVLWSCTNCGACVDQCPTDIEHIDHIADLRR 360 >gi|163788337|ref|ZP_02182783.1| possible oxidoreductase, Fe-S subunit [Flavobacteriales bacterium ALC-1] gi|159876657|gb|EDP70715.1| possible oxidoreductase, Fe-S subunit [Flavobacteriales bacterium ALC-1] Length = 436 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 25/110 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD--------------EFQ 211 Y C C C+++CP+ + L P + ++D+RD EF+ Sbjct: 301 NAYTCTECGRCTSACPANLT--GKKLSPR------KIMMDTRDRLEEVGKNIDANKGEFK 352 Query: 212 GERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L D L+ C T C + CP +NP I +++ L+ + Sbjct: 353 DDGKQLLGDYITNEELWACTTCNACVEECPVSINPLSIILEMRRYLVMEQ 402 >gi|117929320|ref|YP_873871.1| hypothetical protein Acel_2113 [Acidothermus cellulolyticus 11B] gi|117649783|gb|ABK53885.1| protein of unknown function DUF224, cysteine-rich region domain protein [Acidothermus cellulolyticus 11B] Length = 683 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 7/153 (4%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 I PL + + I + + R+ L Sbjct: 228 HLHIVTAPLNVFFARRPDGLGPLMPVVSADHIVDFENPRDDDVIGWGHIADVSRKARLDL 287 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDN----LEDPF 222 C C C + CP+ WN+ + L P +++ R +L+ + + + DP Sbjct: 288 LSCTECGRCQSQCPA--WNTGKPLNPKLIITDLRDYLLTGGSDGTRPLVGPSGGGVIDPE 345 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C C CP + I++++ + Sbjct: 346 ALWACTNCGACVHECPVDIEHLDHISQLRRHQV 378 >gi|47079401|gb|AAT10144.1| hypothetical protein [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 659 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 77/205 (37%), Gaps = 14/205 (6%) Query: 13 KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 + G E E I+R++P +V VL L IKN D Sbjct: 303 EDGFTVPNLAAESLHAEISIFRYDPTAASTG--VDTWVCALPGHMSVLAALREIKNTHDG 360 Query: 73 TLTLRRSC----REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 TL+ R IC + + + G L V +++ A+ + PLP VI+DLVVD Sbjct: 361 TLSFRDGAVDDQSTAICVNGRLILPGNVRLDSVAPIREGTLALRIDPLPGFEVIRDLVVD 420 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + S +PW+ + + + + + +S P +SD Sbjct: 421 HWSLERKRESSKPWMVAATREGFATSQATIG--TMDPVVANALHSITDFSSAPLLHASSD 478 Query: 189 R------YLGPAILLQAYRWLIDSR 207 YLGPA+L+ A+ D R Sbjct: 479 AVPHANGYLGPAVLVTAWARRNDPR 503 >gi|332528074|ref|ZP_08404107.1| glycolate oxidase iron-sulfur subunit [Rubrivivax benzoatilyticus JA2] gi|332112647|gb|EGJ12440.1| glycolate oxidase iron-sulfur subunit [Rubrivivax benzoatilyticus JA2] Length = 414 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E + E + L +CV C C+ +CP+Y D GP + + L++ Sbjct: 2 QTHLSAEFRGTPEGEEAEAILRQCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQLLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + + I L+++++ Sbjct: 62 APVTRSTQL-------HLDRCLTCRNCESTCPSGVQYGRLV-DIGRHLVEQRV 106 >gi|300775365|ref|ZP_07085227.1| iron-sulfur-binding oxidoreductase (ferredoxin) [Chryseobacterium gleum ATCC 35910] gi|300506105|gb|EFK37241.1| iron-sulfur-binding oxidoreductase (ferredoxin) [Chryseobacterium gleum ATCC 35910] Length = 445 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 12/148 (8%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + + + P ++ ++ Y C C C++ C Sbjct: 265 VTKEIKLMMDPNADPYAAPAEGAEADVPSKFGAEDVFDLNQVQLLNAYSCTECGRCTSVC 324 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLED---PFRLYRCHTI 230 P+ + L P ++L R ID +F + L D L+ C T Sbjct: 325 PANIT--GKKLSPRLILMKTRDRLEEVGRNIDKNGKFVDDGKKLLNDYITKEELWACTTC 382 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP L+P I +++ L+ + Sbjct: 383 NACTEACPVLLDPLSIIFEMRRFLVMEQ 410 >gi|124268824|ref|YP_001022828.1| glycolate oxidase iron-sulfur subunit [Methylibium petroleiphilum PM1] gi|124261599|gb|ABM96593.1| putative glycolate oxidase (iron-sulfur subunit) protein [Methylibium petroleiphilum PM1] Length = 413 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 8/99 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L +CV C C+ +CP+Y D GP + + + + R L Sbjct: 16 ADAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQVLEGAEPTRKTQLH- 71 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T NC +CP G+ A+ I ++D K+ Sbjct: 72 ---LDRCLTCRNCESTCPSGVQYG-ALVDIGRRVVDAKV 106 >gi|89899293|ref|YP_521764.1| glycolate oxidase iron-sulfur subunit [Rhodoferax ferrireducens T118] gi|89344030|gb|ABD68233.1| protein of unknown function DUF224, cysteine-rich protein [Rhodoferax ferrireducens T118] Length = 422 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D GP + + +++ R L L R Sbjct: 22 LRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEG---ATPTRKTQLH----LDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T +C +CP G+ + I L+D K+ Sbjct: 75 CLTCRSCESTCPSGVQYGHLL-DIGRKLVDAKV 106 >gi|312795173|ref|YP_004028095.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Burkholderia rhizoxinica HKI 454] gi|312166948|emb|CBW73951.1| (S)-2-hydroxy-acid oxidase subunit GlcF (EC 1.1.3.15) [Burkholderia rhizoxinica HKI 454] Length = 408 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTHLADFIRHTLDGNEAHAILRQCVHCGLCTATCPTYQILGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + A I L+++K+ Sbjct: 62 APVTRSTQL-------HLDRCLTCRNCETTCPSGVQYGRL-AHIGRKLVEQKV 106 >gi|220935207|ref|YP_002514106.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996517|gb|ACL73119.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 402 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + +H+ R+ L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLADFIKDTHQGREAEQILRACVHCGFCNATCPTYQLLGDELDGPRGRIYLMKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 G+ L +L+ RC + NC +CP G+ + + +I ++++++ Sbjct: 62 H-TPTGKTLSHLD------RCLSCRNCETTCPSGVRYGRLV-EIGREVIEQQV 106 >gi|226946354|ref|YP_002801427.1| glycolate oxidase iron-sulfur subunit [Azotobacter vinelandii DJ] gi|226721281|gb|ACO80452.1| Glycolate oxidase iron-sulfur subunit, glcF [Azotobacter vinelandii DJ] Length = 405 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 8/100 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + L CV C C+ +CP+Y D GP + + L++ + +L Sbjct: 15 AAEAERILRSCVHCGFCTATCPTYQLMGDELDGPRGRIYLIKQLLEGHEVTAKTQL---- 70 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T NC +CP G+ + I +++ K+ Sbjct: 71 ---HLDRCLTCRNCETTCPSGVQYHNLL-DIGRAVVEEKV 106 >gi|255530659|ref|YP_003091031.1| hypothetical protein Phep_0747 [Pedobacter heparinus DSM 2366] gi|255343643|gb|ACU02969.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pedobacter heparinus DSM 2366] Length = 425 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 18/107 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + Y C C C++ CP+ + L P + ++D+RD + + LED Sbjct: 291 WVNLMNAYTCTECGRCTSVCPANIT--GKLLSPR------KIMMDTRDRMEEVGKNGLED 342 Query: 221 P----------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ C + CTQ+CP ++P I +++ + Sbjct: 343 GKSLIDTYITREEIWACTSCNACTQACPINIDPLSIITELRRYAVME 389 >gi|218781159|ref|YP_002432477.1| hypothetical protein Dalk_3320 [Desulfatibacillum alkenivorans AK-01] gi|218762543|gb|ACL05009.1| Putative uncharacterized Fe-S oxidoreductase (contains HdrB- and HdrD-like domains) [Desulfatibacillum alkenivorans AK-01] Length = 708 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 14/184 (7%) Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPL-PHMSVIKDLVVDMSHFYSQ-----HRSIE 140 + + NT A + + + PL H VI L ++ + Sbjct: 237 ASVSTLQHVNTWAYLVHEIIFFSFLNILPLGKHFHVITSLPNVFLSKLNKGSVKPVKWGI 296 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + + I Y C C CS CP+ R L P + Sbjct: 297 TEEELDDLESLGVKKATDFTWKHILDFYSCADCGRCSDQCPANAV--GRPLSPRFVTIKC 354 Query: 201 R------WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + + E + + ++ C T C + CP + + ++ + Sbjct: 355 RDKIFGAFPLKGEALPNDELIGTVLSEDEIWSCTTCGACEEECPIFIEYIDKMVDLRRGM 414 Query: 255 LDRK 258 +D Sbjct: 415 VDEG 418 >gi|311744427|ref|ZP_07718228.1| Fe-S dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311312232|gb|EFQ82148.1| Fe-S dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 1011 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 23/116 (19%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------WLIDS----- 206 + I C C C + CP+ WN+++ L P +L+ R D Sbjct: 301 WKGILDFTTCTECGRCQSQCPA--WNTEKPLSPKLLMMGLRDHAYAKIPLLDADPDTLTE 358 Query: 207 -------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R E L + DP L+ C C Q CP + I ++ + Sbjct: 359 AQKAELERPLIGDEDLFGVIDPDVLWSCTNCGACVQQCPVDIEHVDHIDNMRRYQV 414 >gi|271970305|ref|YP_003344501.1| hypothetical protein Sros_9137 [Streptosporangium roseum DSM 43021] gi|270513480|gb|ACZ91758.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 716 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 26/171 (15%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG- 166 I PL M + + + + + + ED Sbjct: 239 HLHIFTAPLNVMFSRRPDGNGPAQPMRIDGKVVDF-EDEDLDGDRLGRGKIEDTTWKGFL 297 Query: 167 -LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-----------DSRDEFQGER 214 Y C C C + CP+ WN+D+ L P +L+ R D R + + Sbjct: 298 DFYTCTECGRCQSQCPA--WNTDKPLSPKMLILDQRDHAFKVAPYLTATQDQRADLHEDV 355 Query: 215 LDNLE----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L L+ P L+ C C + CP + I ++ + Sbjct: 356 LALLDKPLVGEDGVIHPDVLWSCTNCGACVEQCPVDIEHIDHILDMRRYQV 406 >gi|159041912|ref|YP_001541164.1| hypothetical protein Cmaq_1348 [Caldivirga maquilingensis IC-167] gi|157920747|gb|ABW02174.1| protein of unknown function DUF224 cysteine-rich region domain protein [Caldivirga maquilingensis IC-167] Length = 617 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C +CP+ + R L P + ++ +++ DS ++D + Sbjct: 242 LDACVEIGACEEACPA--TLAGRPLSPRMFIRKLKYIKDSNGLNSDLLKVIIDDE--AWS 297 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C T C +CP G+ I ++ L++ Sbjct: 298 CTTCGACVYNCPIGVRHIDLIIDVRRRLVE 327 >gi|288939919|ref|YP_003442159.1| hypothetical protein Alvin_0158 [Allochromatium vinosum DSM 180] gi|288895291|gb|ADC61127.1| protein of unknown function DUF224 cysteine-rich region domain protein [Allochromatium vinosum DSM 180] Length = 408 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L++ E R+ L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTEILPEFLRTPEGREADAILRACVHCGFCTATCPTYQLLGDELDGPRGRIYQIKLVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R+ L RC T C +CP G+ A+ + I +++ ++ Sbjct: 62 Q---TPTRV----TQTHLDRCLTCRACETTCPSGVRYARLV-DIGRHIVEARV 106 >gi|218781057|ref|YP_002432375.1| hypothetical protein Dalk_3217 [Desulfatibacillum alkenivorans AK-01] gi|218762441|gb|ACL04907.1| Putative uncharacterized Fe-S oxidoreductase (contains HdrB- and HdrD-like domains) [Desulfatibacillum alkenivorans AK-01] Length = 708 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 14/184 (7%) Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPL-PHMSVIKDLVVDMSHFYSQ-----HRSIE 140 + + NT A + + + PL H VI L ++ + Sbjct: 237 ASVSTLQHVNTWAYLVHEIIFFSFLNILPLGKHFHVITSLPNVFLSKLNKGSVKPVKWGI 296 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + + I Y C C CS CP+ R L P + Sbjct: 297 TEEELDDLESLGVKKATDFTWKHILDFYSCADCGRCSDQCPANAV--GRPLSPRFVTIKC 354 Query: 201 R------WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + + E + + ++ C T C + CP + + ++ + Sbjct: 355 RDKIFGAFPLKGEALPNDELIGTVLSEDEIWSCTTCGACEEECPIFIEYIDKMVDLRRGM 414 Query: 255 LDRK 258 +D Sbjct: 415 VDEG 418 >gi|224370632|ref|YP_002604796.1| HdrF3 [Desulfobacterium autotrophicum HRM2] gi|223693349|gb|ACN16632.1| HdrF3 [Desulfobacterium autotrophicum HRM2] Length = 688 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 10/198 (5%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL-PHMSVIKDLVVDM- 129 L+L R + G+ + G + + + P+ H VI + Sbjct: 202 APLSLGWIFRGMLLGASQSTLQGLHIVMYYVHDLTFFFFLCFLPMGKHFHVITSFFNVLF 261 Query: 130 ----SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + + + Y C C CS CP+ Sbjct: 262 MRVDKGNIKPVKYGITEAELDDLESFGVKKLEDFTWKHMLDFYSCADCGRCSDQCPANAA 321 Query: 186 N---SDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGL 241 S R++ ++ S + ++ + L ++ ++ C T C Q CP G+ Sbjct: 322 GRPLSPRFISIKARDLIFKNYPLSGEIYKSKMLVQDIYTEDEIWSCTTCGACEQECPLGI 381 Query: 242 NPAKAIAKIKMMLLDRKI 259 I ++ ++D + Sbjct: 382 EYIDKIVDLRRGMVDEGM 399 >gi|113869051|ref|YP_727540.1| glycolate oxidase iron-sulfur subunit [Ralstonia eutropha H16] gi|113527827|emb|CAJ94172.1| 2-Hydroxy-acid oxidase, Fe-S subunit [Ralstonia eutropha H16] Length = 417 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E + + CV C C+ +CP+Y D GP + + +++ + R Sbjct: 10 RNTPEGEEAKSIVGNCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGHAITESTR 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T NC +CP G+ + + I L+D K+ Sbjct: 70 L-------HLDRCLTCRNCESTCPSGVRYGRLV-DIGRKLVDDKL 106 >gi|187929972|ref|YP_001900459.1| glycolate oxidase iron-sulfur subunit [Ralstonia pickettii 12J] gi|187726862|gb|ACD28027.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ralstonia pickettii 12J] Length = 418 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGAATRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|158521428|ref|YP_001529298.1| hypothetical protein Dole_1417 [Desulfococcus oleovorans Hxd3] gi|158510254|gb|ABW67221.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfococcus oleovorans Hxd3] Length = 688 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 17/156 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH-----EDRQKIDG--LYE 169 H VI + F + ++ + L+S ED Y Sbjct: 244 KHFHVITSVFNVF--FMRMKKGNTKPVRHDITDAQLDDLESFGVKKIEDFTWKHMLDFYS 301 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDNLED---PFR 223 C C CS CP+ R L P + R + E + D Sbjct: 302 CADCGRCSDQCPANTV--GRPLSPRFITIKGRDKLFANYPLRGAFAESKPLIGDIYEEDE 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C T C Q CP G+ I ++ ++D + Sbjct: 360 IWSCTTCGACEQECPLGIEYIDKIVDLRRAMVDEGM 395 >gi|46199058|ref|YP_004725.1| iron-sulfur binding reductase, putative [Thermus thermophilus HB27] gi|46196682|gb|AAS81098.1| iron-sulfur binding reductase, putative [Thermus thermophilus HB27] Length = 661 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDN 217 +++ Y C+MC C +CP+Y + L PA +L + R+ ++ R E Sbjct: 275 WKRLLDAYACIMCNRCQEACPAYTT--GKALSPAAILISERYELNEILPRFAQGEESPRP 332 Query: 218 LED----PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L D L+ C T + C + CP G I ++ + Sbjct: 333 LMDFALNEEALWACTTCLACVEVCPVGNEQMLHILDVRRAKV 374 >gi|194290657|ref|YP_002006564.1| glycolate oxidase iron-sulfur subunit [Cupriavidus taiwanensis LMG 19424] gi|193224492|emb|CAQ70503.1| Glycolate oxidase iron-sulfur subunit [Cupriavidus taiwanensis LMG 19424] Length = 417 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E + + +CV C C+ +CP+Y D GP + + +++ + R Sbjct: 10 RDTPEGEEAKSIVGKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGHAITESTR 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T NC +CP G+ + + I L+D K+ Sbjct: 70 L-------HLDRCLTCRNCESTCPSGVRYGRLV-DIGRQLVDDKL 106 >gi|91786099|ref|YP_547051.1| glycolate oxidase iron-sulfur subunit [Polaromonas sp. JS666] gi|91695324|gb|ABE42153.1| protein of unknown function DUF224, cysteine-rich region [Polaromonas sp. JS666] Length = 410 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E + E +Q L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLAPEFKNTAEGQQAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + I L+D ++ Sbjct: 62 EVPTRKTQL-------HLDRCLTCRNCETTCPSGVQYG-HLVDIGRKLVDERV 106 >gi|83648445|ref|YP_436880.1| glycolate oxidase iron-sulfur subunit [Hahella chejuensis KCTC 2396] gi|83636488|gb|ABC32455.1| Fe-S oxidoreductase [Hahella chejuensis KCTC 2396] Length = 405 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + E + + CV C C+ +CP+Y D GP + + ++++ Sbjct: 2 KTDIHAKYKNTPEGDEAEKIIRSCVHCGFCNATCPTYQELGDERDGPRGRIYLIKQMLET 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + RL L RC T +C +CP G+ K + I ++++K+ Sbjct: 62 DEASESTRL-------HLDRCLTCRSCETTCPSGVEYGKLL-DIGRGVVEKKV 106 >gi|309781326|ref|ZP_07676062.1| glycolate oxidase, iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] gi|308919739|gb|EFP65400.1| glycolate oxidase, iron-sulfur subunit [Ralstonia sp. 5_7_47FAA] Length = 414 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGAATRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|258591423|emb|CBE67722.1| putative iron-sulfur cluster-binding protein [NC10 bacterium 'Dutch sediment'] Length = 582 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ----AYRWLIDSRDEFQGERLD 216 + C C C +CP+ W + + L P ++ R + D E + + Sbjct: 199 WKDHLDFEACTECGRCQAACPA--WITGKPLTPKGVIIDLRDHMRLVADG--EEPRKMVG 254 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + L+ C T C Q CP + P I +++ L+ Sbjct: 255 EVISHDVLWACTTCGACHQECPIFIEPIPKIVEMRRHLVME 295 >gi|150024847|ref|YP_001295673.1| Fe-S oxidoreductase N-terminal region [Flavobacterium psychrophilum JIP02/86] gi|149771388|emb|CAL42857.1| Probable Fe-S oxidoreductase N-terminal region [Flavobacterium psychrophilum JIP02/86] Length = 441 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 25/116 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---------- 209 + ++ Y C C C++SCP+ + L P + ++D+RD Sbjct: 300 NWVQLLNAYTCTECGRCTSSCPANQT--GKKLSPR------KIMMDTRDRLVEVGNNIDA 351 Query: 210 -------FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + P L+ C + C + CP ++P I ++ L+ + Sbjct: 352 NKGVFIPDSKFLLGDYITPEELWACTSCNACVEECPVNISPLSIIIDMRRYLVMEQ 407 >gi|7451596|pir||H65083 glycolate oxidase subunits GlcE and GlcF - Escherichia coli (strain K-12) gi|882507|gb|AAA69145.1| ORF_f761 [Escherichia coli str. K-12 substr. MG1655] Length = 761 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + +E+ Q+ + L CV C C+ +CP+Y D GP + + + Sbjct: 353 QAMQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQV 412 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 413 LEGNEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 460 >gi|152980162|ref|YP_001352027.1| glycolate oxidase iron-sulfur subunit [Janthinobacterium sp. Marseille] gi|151280239|gb|ABR88649.1| glycolate oxidase (iron-sulfur subunit) [Janthinobacterium sp. Marseille] Length = 410 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + E + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIKDTREGHEADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + I I +++ ++ Sbjct: 62 KKPTAKTQL-------HLDRCLTCRNCETTCPSGVKYGRLI-DIGRKVVEDQV 106 >gi|71066207|ref|YP_264934.1| glycolate oxidase iron-sulfur subunit [Psychrobacter arcticus 273-4] gi|71039192|gb|AAZ19500.1| glycolate oxidase iron-sulfur subunit [Psychrobacter arcticus 273-4] Length = 402 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 8/112 (7%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + L + ++ D L CV C C+ +CP+Y D GP + + ++++ Sbjct: 3 TQINVKYLDHPDIQEADDILRTCVHCGFCNATCPTYQELGDERDGPRGRIYLLKQMLETG 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D + +L L RC T +C +CP G+ + A+I ++++++ Sbjct: 63 DVSEKSQL-------HLDRCLTCRSCETTCPSGVKYGRL-AEIGRDIMEKQL 106 >gi|328950348|ref|YP_004367683.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinithermus hydrothermalis DSM 14884] gi|328450672|gb|AEB11573.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinithermus hydrothermalis DSM 14884] Length = 677 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 11/119 (9%) Query: 146 VSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + ED Y C+MC C CP+Y + L PA +L R+ Sbjct: 259 EDESIEQYGVAKLEDFSWPRLLDAYSCIMCNRCQEVCPAYTT--GKALSPAAILINERYE 316 Query: 204 ID-------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ + +E L+ + L+ C T C + CP G I ++ + Sbjct: 317 LNRILPGFAAGEESPRPLLEFALNEEALWACTTCNACVEVCPVGNEQMLHIIDVRRERV 375 >gi|256024444|ref|ZP_05438309.1| glycolate oxidase iron-sulfur subunit [Escherichia sp. 4_1_40B] Length = 407 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NDVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|110643209|ref|YP_670939.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 536] gi|218701746|ref|YP_002409375.1| glycolate oxidase iron-sulfur subunit [Escherichia coli IAI39] gi|227887677|ref|ZP_04005482.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 83972] gi|300973508|ref|ZP_07172222.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 45-1] gi|301019920|ref|ZP_07184055.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 196-1] gi|47155044|emb|CAE85243.1| GlcF protein [Escherichia coli] gi|110344801|gb|ABG71038.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 536] gi|218371732|emb|CAR19582.1| glycolate oxidase iron-sulfur subunit [Escherichia coli IAI39] gi|227835073|gb|EEJ45539.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 83972] gi|299882018|gb|EFI90229.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 196-1] gi|300410724|gb|EFJ94262.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 45-1] gi|307555065|gb|ADN47840.1| glycolate oxidase iron-sulfur subunit [Escherichia coli ABU 83972] gi|315291320|gb|EFU50680.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 153-1] Length = 407 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NDVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|301063274|ref|ZP_07203820.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300442627|gb|EFK06846.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 656 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+++ C+ C C CP+ + L P ++ ++ +D+FQ + L + Sbjct: 282 RKRLLDFSSCLWCGRCHEVCPAAQT--GKSLSPKGVIVTLSEYMN-KDKFQDDSLLDEIS 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C T C + CP +N KAI +++ LL + Sbjct: 339 ANAIYSCTTCAACMEVCPVSVNQPKAIMRMRQHLLMER 376 >gi|56752383|ref|YP_173084.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus elongatus PCC 6301] gi|56687342|dbj|BAD80564.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus elongatus PCC 6301] Length = 435 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C + CPSY P + L R E +++ Sbjct: 12 AATPSLTDACVHCGFCLSDCPSYRVLGRETDSPRGRVYLMDSLQQGRIELSDTVVEH--- 68 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CT +CP G+ + I +++ + Sbjct: 69 ---FDTCLGCLACTSACPSGVQYDQLIEEMRQRIAQE 102 >gi|264676336|ref|YP_003276242.1| heterodisulfide reductase [Comamonas testosteroni CNB-2] gi|262206848|gb|ACY30946.1| heterodisulfide reductase [Comamonas testosteroni CNB-2] Length = 417 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLAPEYRATPEGQEAEAILRKCVHCGFCTATCPTYQTLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC T NC +CP G+ + I ++D ++ Sbjct: 62 QTPTRATQL-------HLDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVDEQV 106 >gi|299533807|ref|ZP_07047178.1| glycolate oxidase iron-sulfur subunit [Comamonas testosteroni S44] gi|298718223|gb|EFI59209.1| glycolate oxidase iron-sulfur subunit [Comamonas testosteroni S44] Length = 417 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLAPEYRATPEGQEAEAILRKCVHCGFCTATCPTYQTLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC T NC +CP G+ + I ++D ++ Sbjct: 62 QTPTRATQL-------HLDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVDEQV 106 >gi|169631371|ref|YP_001705020.1| putative Fe-S oxidoreductase [Mycobacterium abscessus ATCC 19977] gi|169243338|emb|CAM64366.1| Putative Fe-S oxidoreductase [Mycobacterium abscessus] Length = 976 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 25/136 (18%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 +++ P ED D L C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MESADPDVDAFGAGKVEDFSWKDLLDVTTCTECGRCQSQCPA--WNTGKPLSPKLLITSL 326 Query: 201 R--------WLIDSRDEFQ--------GERL-----DNLEDPFRLYRCHTIMNCTQSCPK 239 R +L+ D+ + GER + D L+ C T C + CP Sbjct: 327 RDHTYAKAPYLLAGEDKSKLSEAEIAEGERQLVGGEGAVIDHEVLWSCTTCGACVEQCPV 386 Query: 240 GLNPAKAIAKIKMMLL 255 + I ++ + Sbjct: 387 DIEHVDHIIDMRRYQV 402 >gi|81300526|ref|YP_400734.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus elongatus PCC 7942] gi|81169407|gb|ABB57747.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus elongatus PCC 7942] Length = 433 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C + CPSY P + L R E +++ Sbjct: 10 AATPSLTDACVHCGFCLSDCPSYRVLGRETDSPRGRVYLMDSLQQGRIELSDTVVEH--- 66 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CT +CP G+ + I +++ + Sbjct: 67 ---FDTCLGCLACTSACPSGVQYDQLIEEMRQRIAQE 100 >gi|83747249|ref|ZP_00944291.1| glycolate oxidase (Fe-S subunit) GlcF [Ralstonia solanacearum UW551] gi|207744238|ref|YP_002260630.1| glycolate oxidase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] gi|83726073|gb|EAP73209.1| glycolate oxidase (Fe-S subunit) GlcF [Ralstonia solanacearum UW551] gi|206595643|emb|CAQ62570.1| glycolate oxidase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] Length = 415 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I +++ ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVEDQL 106 >gi|300690514|ref|YP_003751509.1| glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum PSI07] gi|299077574|emb|CBJ50207.1| Glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum PSI07] Length = 415 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|300703123|ref|YP_003744725.1| glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] gi|299070786|emb|CBJ42083.1| Glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] Length = 415 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I +++ ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVEDQL 106 >gi|294632987|ref|ZP_06711546.1| ferredoxin, 4Fe-4S [Streptomyces sp. e14] gi|292830768|gb|EFF89118.1| ferredoxin, 4Fe-4S [Streptomyces sp. e14] Length = 724 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 19/174 (10%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A DM +P D + + T + + Sbjct: 229 ALKTDMGVAWHRFLAFPNIWFKREADGGTALGALQPMTSGGKAIDFTDPGEDDVFGVSQV 288 Query: 159 EDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRD 208 E C C C + CP+ WN+ + L P +L+ + R +L+ Sbjct: 289 EQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAYAKAPYLLTGDQ 346 Query: 209 EFQGER-------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ER + + DP L+ C T C + CP + I ++ + Sbjct: 347 GPETERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 400 >gi|93006711|ref|YP_581148.1| glycolate oxidase iron-sulfur subunit [Psychrobacter cryohalolentis K5] gi|92394389|gb|ABE75664.1| protein of unknown function DUF224, cysteine-rich region [Psychrobacter cryohalolentis K5] Length = 403 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + L + ++ D L CV C C+ +CP+Y D GP + + ++++ Sbjct: 3 TQINIKYLDHPDIQEADDILRTCVHCGFCNATCPTYQELGDERDGPRGRIYLLKQMLETG 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D + +L L RC T +C +CP G+ + A+I +++ ++ Sbjct: 63 DVSEKSQL-------HLDRCLTCRSCETTCPSGVKYGRL-AEIGRDIMEEQL 106 >gi|74316062|ref|YP_313802.1| glycolate oxidase iron-sulfur subunit [Thiobacillus denitrificans ATCC 25259] gi|74055557|gb|AAZ95997.1| glycolate oxidase (iron-sulfur subunit) protein [Thiobacillus denitrificans ATCC 25259] Length = 410 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A ++ E L CV C C +CP+Y D P + + +++ Sbjct: 2 QTHLAAPFRETSEGEVAERILRNCVHCGFCLATCPTYQLLGDELDSPRGRIYLMKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L L RC T NC +CP G+ K + I +++R++ Sbjct: 62 ATPTARTQL-------HLDRCLTCRNCETTCPSGVEYGKLL-DIGRAVVEREV 106 >gi|284034672|ref|YP_003384603.1| hypothetical protein Kfla_6813 [Kribbella flavida DSM 17836] gi|283813965|gb|ADB35804.1| protein of unknown function DUF224 cysteine-rich region domain protein [Kribbella flavida DSM 17836] Length = 720 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 26/114 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQG----- 212 C C C + CP+ WN+++ L P +++ R +L+ S DE + Sbjct: 301 DFTTCTECGRCQSQCPA--WNTEKPLSPKLIVMNLRENAYTKAPYLLASSDEERSSLPDL 358 Query: 213 -----ER------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ER + D L+ C + C Q CP + AI ++ + Sbjct: 359 VKAEMERPLVGSPDVAVIDEDALWACTSCGACVQQCPVDIEHVDAIMDMRRYQV 412 >gi|207721665|ref|YP_002252104.1| glycolate oxidase (iron-sulfur subunit) protein [Ralstonia solanacearum MolK2] gi|206586826|emb|CAQ17411.1| glycolate oxidase (iron-sulfur subunit) protein [Ralstonia solanacearum MolK2] Length = 415 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I +++ ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVEDQL 106 >gi|241767047|ref|ZP_04764830.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax delafieldii 2AN] gi|241362418|gb|EER58370.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax delafieldii 2AN] Length = 417 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + + L +CV C C+ +CP+Y D GP + + Sbjct: 2 QTQLAPEYRARPDGLEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQV 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R + L RC T NC +CP G+ + I ++D K+ Sbjct: 59 LEGETPTRKTQMH----LDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVDEKV 106 >gi|256371759|ref|YP_003109583.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008343|gb|ACU53910.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 723 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 20/110 (18%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR----------WLIDS--RDEFQGER 214 L C C C CP+ L P L+ R L+DS R G R Sbjct: 321 LDACTKCGRCHGVCPARTA--GAPLSPRDLVLDLRSWLDRAQGIELLLDSEDRPTPTGPR 378 Query: 215 L------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 N+ L+ C T M C + CP G+ I +++ L+D Sbjct: 379 APSGPLAGNVVAERVLWSCTTCMACVEVCPVGIEHVPLIVQLRRPLVDAG 428 >gi|270289684|ref|ZP_06195986.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia muridarum Weiss] Length = 119 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C CC+ +CP SD ++GPA + QA + ++ + RL L Sbjct: 1 MYSLSMCMTCGCCTEACPQVNEKSD-FMGPAAIAQARYFNSYPGEKRRESRLRALMGNRG 59 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C NC + CPK L ++I+ + Sbjct: 60 IEGCGQAHNCVRVCPKKLPLTESISAM 86 >gi|325105002|ref|YP_004274656.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pedobacter saltans DSM 12145] gi|324973850|gb|ADY52834.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pedobacter saltans DSM 12145] Length = 430 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 12/102 (11%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ--------AYRWLIDSRDEF--QGERL 215 Y C C C+ CP+ + L P ++ R L S DE + L Sbjct: 295 NAYTCTECGRCTAVCPANIT--GKLLSPRKIMMDTRDRLEEVGRLLDKSNDEGLKKNTLL 352 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DN ++ C T CTQ+CP ++P I +++ + Sbjct: 353 DNYISREEIWACTTCNACTQACPVNIDPLSIIMELRRYAIME 394 >gi|17547387|ref|NP_520789.1| glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum GMI1000] gi|17429690|emb|CAD16375.1| probable glycolate oxidase (iron-sulfur subunit) protein [Ralstonia solanacearum GMI1000] Length = 415 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|221069566|ref|ZP_03545671.1| protein of unknown function DUF224 cysteine-rich region domain protein [Comamonas testosteroni KF-1] gi|220714589|gb|EED69957.1| protein of unknown function DUF224 cysteine-rich region domain protein [Comamonas testosteroni KF-1] Length = 417 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLAPEYRATPEGQEAEAILRKCVHCGFCTATCPTYQTLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L L RC T NC +CP G+ + I ++D ++ Sbjct: 62 Q---TPTRSTQLH----LDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVDEQV 106 >gi|241664082|ref|YP_002982442.1| glycolate oxidase iron-sulfur subunit [Ralstonia pickettii 12D] gi|240866109|gb|ACS63770.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ralstonia pickettii 12D] Length = 414 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGPATRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|187478641|ref|YP_786665.1| glycolate oxidase iron-sulfur subunit [Bordetella avium 197N] gi|115423227|emb|CAJ49759.1| glycolate oxidase iron-sulfur subunit [Bordetella avium 197N] Length = 411 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + R+ L CV C CS +CP+Y D P + + +++ Sbjct: 2 QTELASWARGTDLGREVDAMLRRCVHCGFCSATCPTYQVLGDERDSPRGRIYLIKQVMEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q L RC T NC +CP G+ I + ++D ++ Sbjct: 62 ASPTQA-------TQTHLDRCLTCRNCETTCPSGVEYGHLI-DLGRKVVDARV 106 >gi|299065773|emb|CBJ36950.1| Glycolate oxidase iron-sulfur subunit [Ralstonia solanacearum CMR15] Length = 415 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+ +CP+Y D GP + + +++ + + RL L RC Sbjct: 24 KCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRL-------HLDRCL 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC +CP G+ + + +I ++D ++ Sbjct: 77 TCRNCESTCPSGVTYGRLV-EIGRKIVDDQL 106 >gi|288930503|ref|YP_003434563.1| hypothetical protein Ferp_0099 [Ferroglobus placidus DSM 10642] gi|288892751|gb|ADC64288.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ferroglobus placidus DSM 10642] Length = 647 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSRDEFQGE 213 + + C+ C C +CP++ NS L P L+Q R + R + + Sbjct: 266 QWRDLLSSIACMRCGRCQDNCPAF--NSGTTLSPMYLMQNLRKTLNDTFDFIGRKKEETL 323 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 LD++ D ++ C T C + CP + + I +++ +++ Sbjct: 324 LLDSVIDMDAVWACTTCKACMEMCPVYIEQMEIIGEMRRGIVE 366 >gi|171059932|ref|YP_001792281.1| glycolate oxidase iron-sulfur subunit [Leptothrix cholodnii SP-6] gi|170777377|gb|ACB35516.1| protein of unknown function DUF224 cysteine-rich region domain protein [Leptothrix cholodnii SP-6] Length = 424 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D GP + + + + R L L R Sbjct: 22 LRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQVLEGAEPTRKTQLH----LDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + + +I ++D K+ Sbjct: 75 CLTCRNCESTCPSGVQYGQLV-EIGRKVVDAKV 106 >gi|294339139|emb|CAZ87493.1| Glycolate oxidase iron-sulfur subunit [Thiomonas sp. 3As] Length = 410 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E + E +Q L CV C C+ +CP+Y D GP + + + Sbjct: 2 ETHLSPEFASTPEGQQAEAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYQ---IKQA 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L L RC T NC +CP G+ + + I ++D K+ Sbjct: 59 LEGEAPTRTTQLH----LDRCLTCRNCETTCPSGVEYGRLV-DIGRAVVDAKV 106 >gi|296135092|ref|YP_003642334.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thiomonas intermedia K12] gi|295795214|gb|ADG30004.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thiomonas intermedia K12] Length = 410 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E + E +Q L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 ETHLSPEFASTPEGQQAEAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYQIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + + I ++D K+ Sbjct: 62 EAPTRTTQL-------HLDRCLTCRNCETTCPSGVEYGRLV-DIGRAVVDAKV 106 >gi|217970056|ref|YP_002355290.1| glycolate oxidase iron-sulfur subunit [Thauera sp. MZ1T] gi|217507383|gb|ACK54394.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thauera sp. MZ1T] Length = 413 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E R+ + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLADFIRDTPEGREAEEILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + RL L RC T +C +CP G++ ++ + I ++ ++ Sbjct: 62 AAPTEKTRL-------HLDRCLTCRSCESTCPSGVHYSRLL-DIGRAVVAERV 106 >gi|218782273|ref|YP_002433591.1| succinate dehydrogenase/fumarate reductase Fe-S protein subunit-like protein [Desulfatibacillum alkenivorans AK-01] gi|218763657|gb|ACL06123.1| Putative succinate dehydrogenase/fumarate reductase Fe-S protein subunit-like protein [Desulfatibacillum alkenivorans AK-01] Length = 280 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREG 83 + +++R+NPD P TY V + G +D L YI +D +L C G Sbjct: 4 KIINAKVFRFNPDKDAEPRYQTYQVPFE-EGLSAMDVLDYIYQNLDSSLAYYDHAGCSLG 62 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 ICG C I+G L C + G + + P+ V+KDLV Sbjct: 63 ICGKCTARINGKVGLLCQTPVS--DGELLLEPMNKNKVLKDLVP 104 >gi|253701388|ref|YP_003022577.1| hypothetical protein GM21_2785 [Geobacter sp. M21] gi|251776238|gb|ACT18819.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 656 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 15/190 (7%) Query: 84 ICGSCGMNIDGTNT--LACVKDMKDIKGAIA----VYPLPHMSVIKDLVVDMSHFYSQHR 137 + G+ + G L + + A+ + LP + L + ++ Sbjct: 182 VSGALATLLQGMPQASLEGIASVSWWVHAVVLLLFINLLPRSKHMHILTAIPNCYFRNLE 241 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAI 195 + + + D L C C C CP++ I Sbjct: 242 KPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRII 301 Query: 196 LLQAYRWLIDSRDEFQGERLDNLED-------PFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L + E+L + + L+ C T C CP + I Sbjct: 302 HDIKVNLLENGVANAGKEQLPLIGEKGEGTSCEDALWSCTTCGACLSVCPVLIEHMPKIV 361 Query: 249 KIKMMLLDRK 258 K++ L+ K Sbjct: 362 KMRRHLVQEK 371 >gi|149927226|ref|ZP_01915483.1| hypothetical protein LMED105_07288 [Limnobacter sp. MED105] gi|149824165|gb|EDM83386.1| hypothetical protein LMED105_07288 [Limnobacter sp. MED105] Length = 416 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + + + L +CV C C+ +CP+Y D P + + +++ Sbjct: 2 DTQLADWIKDTPDGKAADAILRKCVHCGFCTATCPTYQILGDELDSPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T NC +CP G+ + I I ++D ++ Sbjct: 62 KQVTRK-------TQQHLDRCLTCRNCETTCPSGVKYGQLI-DIGRKIVDERV 106 >gi|82701309|ref|YP_410875.1| glycolate oxidase iron-sulfur subunit [Nitrosospira multiformis ATCC 25196] gi|82409374|gb|ABB73483.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 449 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + E ++ L CV C C +CP+Y D P + + +++ Sbjct: 2 QTNLADFIKDTPEGKEAEAILRTCVHCGFCLATCPTYQLLGDELDSPRGRIYLMKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T C +CP G+ + I L+++K+ Sbjct: 62 EPVTEKTQL-------HLDRCLTCRACETACPSGVRYG-HLVDIGRGLVEKKV 106 >gi|327405360|ref|YP_004346198.1| iron-sulfur protein [Fluviicola taffensis DSM 16823] gi|327320868|gb|AEA45360.1| iron-sulfur protein [Fluviicola taffensis DSM 16823] Length = 442 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + Y C C C++SCP+ + L P + ++D+RD Sbjct: 302 WKNLMDAYTCTECGRCTSSCPANIT--GKKLSPR------KIMMDTRDRLVEYADGKRKN 353 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E L + ++ C + C Q CP ++P I ++ L+ Sbjct: 354 GKDYEDGKSLLGDYITEEEVWACTSCNACVQECPVNIDPLAIIVDLRRYLVME 406 >gi|160895755|ref|YP_001561337.1| glycolate oxidase iron-sulfur subunit [Delftia acidovorans SPH-1] gi|160361339|gb|ABX32952.1| protein of unknown function DUF224 cysteine-rich region domain protein [Delftia acidovorans SPH-1] Length = 416 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E ++ L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLAPQYRATPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T NC +CP G+ + I +++ ++ Sbjct: 62 EKPTRA-------TQQHLDRCLTCRNCESTCPSGVQYG-HLVDIGRKIVEEQV 106 >gi|295696590|ref|YP_003589828.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] gi|295412192|gb|ADG06684.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] Length = 602 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 7/100 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D CV C C +CP+Y P + R L + R +++ Sbjct: 17 EDLPYDEALRCVQCGYCLPACPTYRTMGKETHSPRGRINLVRMLAEGRTDWK-------V 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C ++CP G+ + + + + L +RK+ Sbjct: 70 VEEPIDLCLGCRACEEACPVGVPYGQILEETRHYLRERKM 109 >gi|18313520|ref|NP_560187.1| iron-sulfur protein, putative [Pyrobaculum aerophilum str. IM2] gi|18161060|gb|AAL64369.1| iron-sulfur protein, putative [Pyrobaculum aerophilum str. IM2] Length = 154 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Query: 35 WNPDNKGNP----------CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + P P + Y+VD+ + VLD L+ +K +D TL R +CR G+ Sbjct: 51 YQPGRDEKPLAELYPGGVSYVQEYHVDVGDGKITVLDLLIKVKEDLDGTLVFRYACRMGL 110 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 CG+C + I+G LAC+ + D+ I V P+ VIKDLVVD Sbjct: 111 CGACTVKINGKPRLACMTMVADLGSEITVEPI-TEKVIKDLVVD 153 >gi|167628494|ref|YP_001678993.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591234|gb|ABZ82982.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 720 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 15/101 (14%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDSRDEFQGERLDN 217 K ++C+ CA C CP+Y G I + D D + + L Sbjct: 306 PKFKQAWQCIRCASCLNVCPAYQMVGGHVYGHIYAGGIGAILTFFFNDPTDAEKPQNL-- 363 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT+ CP + I +++ + ++K Sbjct: 364 ---------CLGCGRCTEVCPGKIPIPDLILEMRRRMAEKK 395 >gi|291297608|ref|YP_003508886.1| hypothetical protein Snas_0071 [Stackebrandtia nassauensis DSM 44728] gi|290566828|gb|ADD39793.1| protein of unknown function DUF224 cysteine-rich region domain protein [Stackebrandtia nassauensis DSM 44728] Length = 727 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 35/146 (23%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + E C C C + CP+ WN+D+ L P +L+ Sbjct: 291 FENADPETDPFGVGQVEQFTWKGLLDFTTCTECGRCQSQCPA--WNTDKPLSPKLLITDL 348 Query: 201 RWLI-------------------------------DSRDEFQGERLDNLEDPFRLYRCHT 229 R + D+ E + + ++ DP L+ C T Sbjct: 349 REHLYAKAPYLLAGGGKDALGEETGTAEQLKDVPADALAEAEKSLVGDVIDPDVLWSCTT 408 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 409 CGACVEQCPVDIEHVDHIVDMRRHQV 434 >gi|332520287|ref|ZP_08396749.1| iron-sulfur protein [Lacinutrix algicola 5H-3-7-4] gi|332043640|gb|EGI79835.1| iron-sulfur protein [Lacinutrix algicola 5H-3-7-4] Length = 437 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 25/154 (16%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + + P + Y C C C++ C Sbjct: 257 VTKEVKLMMDPDADPFAAPAETEEEEVPAKFGASDVQDLSWLNLLNAYTCTECGRCTSEC 316 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD-----------------EFQGERLDNLEDPFR 223 P+ + L P + ++D+RD + + L++ Sbjct: 317 PANLT--GKKLSPR------KIMMDTRDRLEEVGKNIDTNKGVFVDDGKQLLNDYITKEE 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ C + C ++CP ++P I +++ L+ Sbjct: 369 LWACTSCNACVEACPISIDPLNIIMEMRRYLVME 402 >gi|302189441|ref|ZP_07266114.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. syringae 642] Length = 371 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHARTLPRAAEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + RL L RC + NC +CP G++ + I +D Sbjct: 62 QPVTEKTRL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDA 104 >gi|20093026|ref|NP_619101.1| heterodisulfide reductase, subunit C [Methanosarcina acetivorans C2A] gi|41017213|sp|Q8TIB9|HDRC_METAC RecName: Full=CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit C gi|19918347|gb|AAM07581.1| heterodisulfide reductase, subunit C [Methanosarcina acetivorans C2A] Length = 161 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ SCPS G L R + D+R R L D L+ C T Sbjct: 19 CMHCGICTGSCPS---------GRHTGLNTRRIIRDAR----KNRAAVLSDYD-LWLCTT 64 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP+G+ AI +++ + + + Sbjct: 65 CYTCQERCPRGIPITDAILELRRLAVREGL 94 >gi|193213849|ref|YP_001995048.1| hypothetical protein Ctha_0130 [Chloroherpeton thalassium ATCC 35110] gi|193087326|gb|ACF12601.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroherpeton thalassium ATCC 35110] Length = 679 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQG-----E 213 ++ Y C+MC C CP++ NS L P+ L R ++ + + + Sbjct: 276 AWPQVLDSYACIMCTRCHEVCPAH--NSGTPLSPSALEINKRYFINQNAKQLTNGWEDPK 333 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D ++ C T C + CP G P I +++ L+ Sbjct: 334 LSDYAISEDAIWNCTTCYACVRVCPVGNEPMLDIVEMRRNLV 375 >gi|145589963|ref|YP_001156560.1| glycolate oxidase iron-sulfur subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048369|gb|ABP34996.1| protein of unknown function DUF224, cysteine-rich region domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 426 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + E + L +CV C C+ +CP+Y D GP + + + + Sbjct: 2 QTQLAPQFANTPEGIEAARILGKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQIAEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + RL L RC T NC +CP G+ I I + Sbjct: 62 QQPTEKTRL-------HLDRCLTCRNCESTCPSGVQYGNLI-DIGRKWAEE 104 >gi|222053363|ref|YP_002535725.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221562652|gb|ACM18624.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 660 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 11/153 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCA 174 P + L + ++ + K + + E D C C Sbjct: 220 PRSKHMHILTAIPNCYFRSLEKPNVQPRETFKKGERYGVSQVEQFTWKDLFDSMTCTECG 279 Query: 175 CCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C CP++ D L A + + GE + L+ Sbjct: 280 RCQDLCPAHNTGKPLNPRRIVHDIKLNLFGNASALKEAQQGKTPLIGEAGEGTISEEALW 339 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C CP + I K++ L++ K Sbjct: 340 SCTTCGACLSVCPVLIEHMPKIVKMRRHLVEEK 372 >gi|291613294|ref|YP_003523451.1| hypothetical protein Slit_0825 [Sideroxydans lithotrophicus ES-1] gi|291583406|gb|ADE11064.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sideroxydans lithotrophicus ES-1] Length = 415 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + + + L CV C C+ +CP+Y GP + + ++++ Sbjct: 2 QTSISPDSLDNPDIAEADAILRSCVHCGFCNATCPTYQLLGSELDGPRGRIYLIKEMLET 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RL L RC T +C +CP G+ + I I L + Sbjct: 62 GQASGETRL-------HLDRCLTCRSCETTCPSGVRYGRLI-DIGRELAEE 104 >gi|163857046|ref|YP_001631344.1| glycolate oxidase iron-sulfur subunit [Bordetella petrii DSM 12804] gi|163260774|emb|CAP43076.1| Glycolate oxidase iron-sulfur subunit [Bordetella petrii] Length = 407 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ L CV C C+ +CP+Y D P + + +++ + L Sbjct: 16 READAILRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQVLEGAE-------PTLAT 68 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T NC +CP G+ I I ++D+K+ Sbjct: 69 QQHLDRCLTCRNCETTCPSGVQYGHLI-DIGRNVVDQKV 106 >gi|114777689|ref|ZP_01452649.1| hypothetical protein SPV1_08476 [Mariprofundus ferrooxydans PV-1] gi|114551905|gb|EAU54439.1| hypothetical protein SPV1_08476 [Mariprofundus ferrooxydans PV-1] Length = 402 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + E + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 FRDTPEGLEADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGGQASEK- 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T C +CP G+ + I L+DR++ Sbjct: 68 ------TQAHLDRCLTCRACETTCPSGVQYG-HLVDIGRTLVDRQV 106 >gi|330953885|gb|EGH54145.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae Cit 7] Length = 318 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + RL L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|330501129|ref|YP_004377998.1| glycolate oxidase iron-sulfur subunit [Pseudomonas mendocina NK-01] gi|328915415|gb|AEB56246.1| glycolate oxidase iron-sulfur subunit [Pseudomonas mendocina NK-01] Length = 405 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQMLEGNEVTAK-------TQEHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++ + Sbjct: 75 CLTCRNCETTCPSGVQYHNLL-DIGREVVEQAV 106 >gi|317121323|ref|YP_004101326.1| hypothetical protein Tmar_0478 [Thermaerobacter marianensis DSM 12885] gi|315591303|gb|ADU50599.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter marianensis DSM 12885] Length = 711 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 55/196 (28%), Gaps = 41/196 (20%) Query: 95 TNTLACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 A + + + LP V L + S+ ++ +P Sbjct: 216 RAVHAGTWLLHMLTWHAWLAALPYSKAFHLVTGPLNIFFSNLDAKGEP-KPMDLEDETAS 274 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 +++ L C C C +CP++ + L P R ++D RD Sbjct: 275 LGARTVLDFTWKQLLDLDACTECGRCEAACPAFAE--GKPLSPK------RVILDLRDHV 326 Query: 211 QGERLDNL----------------------------EDPFRLYRCHTIMNCTQSCPKGLN 242 + R D L L+ C T C ++CP + Sbjct: 327 RAHRDDLLRAKAAQLAGDQETYESIVEHLPILAGGVIKEETLWACTTCRACEEACPVFIE 386 Query: 243 PAKAIAKIKMMLLDRK 258 I ++ L K Sbjct: 387 HVPTILDMRRYLAMEK 402 >gi|256389491|ref|YP_003111055.1| hypothetical protein Caci_0261 [Catenulispora acidiphila DSM 44928] gi|256355717|gb|ACU69214.1| protein of unknown function DUF224 cysteine-rich region domain protein [Catenulispora acidiphila DSM 44928] Length = 748 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR----------WLIDSRDEFQGERL 215 C C C CP+ WN+D+ L P +L+ A R + +D E+L Sbjct: 305 DFSTCTECGRCQDQCPA--WNTDKPLSPKLLMLALRDHSAAKAPYLFAGGGKDLEGNEKL 362 Query: 216 DN--------------------------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + DP L+ C T C + CP + I Sbjct: 363 AEEKWLSLPDMVRAEAERPLIGTAEENGVIDPDILWSCTTCGACVEQCPVDIEHVDHIVD 422 Query: 250 IKMMLL 255 ++ + Sbjct: 423 MRRYQV 428 >gi|227834161|ref|YP_002835868.1| putative Fe-S oxidoreductase [Corynebacterium aurimucosum ATCC 700975] gi|262183351|ref|ZP_06042772.1| putative Fe-S oxidoreductase [Corynebacterium aurimucosum ATCC 700975] gi|227455177|gb|ACP33930.1| putative Fe-S oxidoreductase [Corynebacterium aurimucosum ATCC 700975] Length = 877 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 8/128 (6%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F+ ++ E L V ++L + + C C C CP+ WN++ Sbjct: 233 FNIFFQRNADGEKALGAVPTPDLEDLEPGS--WKMLLDASSCTECGRCQDLCPA--WNTE 288 Query: 189 RYLGPAILLQAYRW----LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L P L+ R + + + D L+ C C CP + Sbjct: 289 KPLSPKKLMMDLRQGALDNYNPHEGLNVLAMAGTIDDDVLWACTNCGACVDQCPVDIEHI 348 Query: 245 KAIAKIKM 252 +A ++ Sbjct: 349 DHVADLRR 356 >gi|297566817|ref|YP_003685789.1| hypothetical protein Mesil_2426 [Meiothermus silvanus DSM 9946] gi|296851266|gb|ADH64281.1| protein of unknown function DUF224 cysteine-rich region domain protein [Meiothermus silvanus DSM 9946] Length = 679 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 9/102 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGER--- 214 ++ Y C+ C C CP+Y + L PA +L + R+ ++ E Sbjct: 276 WPRLLDAYSCIQCNRCQEVCPAYTT--GKALSPAAILISERYELNEILPMFAAGKESPRP 333 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LD + ++ C T C + CP G I I+ + Sbjct: 334 LLDFATNEESIWACTTCNACIEVCPVGNEQMLHIVDIRRERV 375 >gi|73542478|ref|YP_296998.1| glycolate oxidase iron-sulfur subunit [Ralstonia eutropha JMP134] gi|72119891|gb|AAZ62154.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224, cysteine-rich region [Ralstonia eutropha JMP134] Length = 417 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E + + +CV C C+ +CP+Y D GP + + +++ + R Sbjct: 10 RNTPEGEEAKSIVGKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGNAVSESTR 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T NC +CP G+ + + I ++D ++ Sbjct: 70 L-------HLDRCLTCRNCESTCPSGVRYGRLV-DIGRQVVDEQL 106 >gi|256391669|ref|YP_003113233.1| hypothetical protein Caci_2474 [Catenulispora acidiphila DSM 44928] gi|256357895|gb|ACU71392.1| protein of unknown function DUF224 cysteine-rich region domain protein [Catenulispora acidiphila DSM 44928] Length = 721 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 32/150 (21%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + + K + ED L C C C + CP+ WN+++ L P Sbjct: 256 YSDGKAVDFEDPGEDDKIGRGAIEDFTWKGLLDLATCTECGRCQSQCPA--WNTEKPLSP 313 Query: 194 AILLQAYR---------WLIDS-------------------RDEFQGERLDNLEDPFRLY 225 +L+ + R L +S R G ++ + DP L+ Sbjct: 314 KLLIMSLRDHALAKAPYLLAESEEARAAMETSAVDVFAEAQRPLVGGADVNGVIDPDVLW 373 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C T C + CP + I ++ + Sbjct: 374 SCVTCGACVEQCPVDIEHVDHIVDMRRYQV 403 >gi|170766050|ref|ZP_02900861.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia albertii TW07627] gi|170125196|gb|EDS94127.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia albertii TW07627] Length = 407 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ ++ L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNPRAQEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|225010768|ref|ZP_03701237.1| putative Fe-S oxidoreductase [Flavobacteria bacterium MS024-3C] gi|225005139|gb|EEG43092.1| putative Fe-S oxidoreductase [Flavobacteria bacterium MS024-3C] Length = 441 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 25/110 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG------------- 212 Y C C C+ CP+ + L P + ++D+RD + Sbjct: 305 NAYTCTECGRCTDMCPANQT--GKKLSPRKV------MMDTRDRLEEVGKNTKKNKGVFV 356 Query: 213 ----ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L + L+ C + C ++CP ++P I +++ L+ + Sbjct: 357 PDGKQLLGDCISAEELWACTSCNACVEACPVSIDPLSIIMEMRQYLVMEQ 406 >gi|153005778|ref|YP_001380103.1| hypothetical protein Anae109_2919 [Anaeromyxobacter sp. Fw109-5] gi|152029351|gb|ABS27119.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter sp. Fw109-5] Length = 472 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +CV C C CP++ + P + YR L D R Sbjct: 40 RNPADDCVHCGFCLPVCPTWQSWQEEMDSPRGRIDLYRALEDGRIAMSPIV------AEH 93 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC M C +CP G+ I + ++R + Sbjct: 94 FDRCLGCMACLTACPSGVRYDHVIEAARAR-VERDL 128 >gi|300771363|ref|ZP_07081239.1| iron-sulfur-binding reductase [Sphingobacterium spiritivorum ATCC 33861] gi|300762033|gb|EFK58853.1| iron-sulfur-binding reductase [Sphingobacterium spiritivorum ATCC 33861] Length = 431 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + Y C C C+++CP+ + + L P + ++D+RD Sbjct: 292 WKNLLDAYTCTECGRCTSACPAN--MTGKLLSPR------KIMMDTRDRLEEVGKSIDKN 343 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E LD ++ C + C + CP +NP + I ++ + Sbjct: 344 GSAVEDNKSLLDTYISREEIWACTSCNACVEQCPVNINPLEIIMGLRQYAVME 396 >gi|313498297|gb|ADR59663.1| GlcF [Pseudomonas putida BIRD-1] Length = 411 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVKYHDLL-DIGRAVVEQQV 106 >gi|324568576|gb|ADY49908.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Ascaris suum] Length = 75 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 34/59 (57%), Positives = 46/59 (77%) Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +RW+IDSRD+ ERL ++D F ++CHTIMNCT++CPK LNPA+AI +IKM+L K Sbjct: 5 FRWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKMK 63 >gi|114327550|ref|YP_744707.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Granulibacter bethesdensis CGDNIH1] gi|114315724|gb|ABI61784.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Granulibacter bethesdensis CGDNIH1] Length = 454 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ + L CV C C+ +CP++ D P + + ++++ Sbjct: 2 QTSFTPEQLRDPDIAASNQVLRTCVHCGFCTATCPTFVLLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +L+ RC + ++C +CP G+N I + + Sbjct: 62 GRAATQEVVKHLD------RCLSCLSCMSTCPSGVNYMHLIDHARSHVEK 105 >gi|330972083|gb|EGH72149.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 410 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + RL L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVE 103 >gi|296393648|ref|YP_003658532.1| hypothetical protein Srot_1231 [Segniliparus rotundus DSM 44985] gi|296180795|gb|ADG97701.1| protein of unknown function DUF224 cysteine-rich region domain protein [Segniliparus rotundus DSM 44985] Length = 1006 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 28/138 (20%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P ED + C C C + CP+ WN+ + L P +L+ + R Sbjct: 271 EEADPDEDAFGAGKIEDFSWKNLLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLITSLR 328 Query: 202 --------WLIDS----------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +L++ +G+ L + DP L+ C T C + C Sbjct: 329 DHAYAKAPYLLNGDKAPAAAVAEAERPLVGPVGEGDLLGGVIDPEVLWSCTTCGACVEQC 388 Query: 238 PKGLNPAKAIAKIKMMLL 255 P + I ++ + Sbjct: 389 PVDIEHVDHIIDLRRHQV 406 >gi|293416415|ref|ZP_06659054.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B185] gi|291431771|gb|EFF04754.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B185] Length = 407 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|282936086|gb|ADB04300.1| hypothetical protein [bacterium enrichment culture clone N47] gi|308272802|emb|CBX29406.1| hypothetical protein N47_J03870 [uncultured Desulfobacterium sp.] Length = 664 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 3/98 (3%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+++ C+ C C CP+ + L P +++ ++ D FQ + L Sbjct: 292 RKRLLDFSTCLWCGRCHEVCPAAQT--GKSLSPKMVIVTLSEYMN-EDRFQDDSLLEEIS 348 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C T C + CP +N KAI +++ LL + Sbjct: 349 GNAIYSCTTCAACMEVCPVSVNQPKAIMRMRQHLLMER 386 >gi|116327777|ref|YP_797497.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331564|ref|YP_801282.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120521|gb|ABJ78564.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125253|gb|ABJ76524.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 695 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 27/134 (20%) Query: 147 SPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-L 203 + + ED + L C+ C C CP+ + L P ++ + L Sbjct: 273 EDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRT--GKVLNPKAIIADLKHAL 330 Query: 204 IDSRDEFQGERLDNLE----------------------DPFRLYRCHTIMNCTQSCPKGL 241 +D E R + + L+ C T C ++CP G Sbjct: 331 LDKMPEVAKIRAEETDATIAAEKIAALDTGVINNYEGLSEEALWGCTTCYACVEACPVGN 390 Query: 242 NPAKAIAKIKMMLL 255 N AI +++ L+ Sbjct: 391 NQVNAIMEMRRHLV 404 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 5/37 (13%) Query: 226 RCHTIMNCTQSCPKG-----LNPAKAIAKIKMMLLDR 257 C C CP LNP IA +K LLD+ Sbjct: 297 SCIECGRCQVQCPANRTGKVLNPKAIIADLKHALLDK 333 >gi|193067448|ref|ZP_03048416.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli E110019] gi|192959405|gb|EDV89840.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli E110019] Length = 407 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|332280209|ref|ZP_08392622.1| glycolate oxidase GlcE and GlcF [Shigella sp. D9] gi|332102561|gb|EGJ05907.1| glycolate oxidase GlcE and GlcF [Shigella sp. D9] Length = 456 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + +E+ Q+ + L CV C C+ +CP+Y D GP + + + Sbjct: 48 QAMQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQV 107 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 108 LEGNEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 155 >gi|331643671|ref|ZP_08344802.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H736] gi|331037142|gb|EGI09366.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H736] Length = 456 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + +E+ Q+ + L CV C C+ +CP+Y D GP + + + Sbjct: 48 QAMQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQV 107 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 108 LEGNEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 155 >gi|254385213|ref|ZP_05000545.1| hypothetical protein SSAG_04908 [Streptomyces sp. Mg1] gi|194344090|gb|EDX25056.1| hypothetical protein SSAG_04908 [Streptomyces sp. Mg1] Length = 52 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DE +RL+ L D ++RC T NCT +CP+G+ KAI ++K L+ R+ Sbjct: 1 DEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALITRR 51 >gi|194436683|ref|ZP_03068783.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli 101-1] gi|194424165|gb|EDX40152.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli 101-1] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|157155598|ref|YP_001464434.1| glycolate oxidase iron-sulfur subunit [Escherichia coli E24377A] gi|191169574|ref|ZP_03031297.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli B7A] gi|157077628|gb|ABV17336.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli E24377A] gi|190900385|gb|EDV60211.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli B7A] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|254038149|ref|ZP_04872207.1| glycolate oxidase GlcE and GlcF [Escherichia sp. 1_1_43] gi|226839773|gb|EEH71794.1| glycolate oxidase GlcE and GlcF [Escherichia sp. 1_1_43] Length = 456 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + +E+ Q+ + L CV C C+ +CP+Y D GP + + + Sbjct: 48 QAMQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQV 107 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 108 LEGNEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 155 >gi|324119782|gb|EGC13662.1| cysteine-rich domain-containing protein [Escherichia coli E1167] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|323183559|gb|EFZ68956.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 1357] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|320201884|gb|EFW76459.1| Glycolate dehydrogenase , iron-sulfur subunit GlcF [Escherichia coli EC4100B] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|148547238|ref|YP_001267340.1| glycolate oxidase iron-sulfur subunit [Pseudomonas putida F1] gi|148511296|gb|ABQ78156.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pseudomonas putida F1] Length = 411 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVKYHDLL-DIGRAVVEQQV 106 >gi|260845730|ref|YP_003223508.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O103:H2 str. 12009] gi|257760877|dbj|BAI32374.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O103:H2 str. 12009] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|331679044|ref|ZP_08379716.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H591] gi|331073109|gb|EGI44432.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H591] Length = 456 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + +E+ Q+ + L CV C C+ +CP+Y D GP + + + Sbjct: 48 QAMQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQV 107 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 108 LEGNEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 155 >gi|320181000|gb|EFW55921.1| Glycolate dehydrogenase , iron-sulfur subunit GlcF [Shigella boydii ATCC 9905] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|322418858|ref|YP_004198081.1| hypothetical protein GM18_1337 [Geobacter sp. M18] gi|320125245|gb|ADW12805.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 664 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 15/154 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMC 173 LPH + L + ++ + K A + S E D C C Sbjct: 221 LPHSKHMHILTAIPNCYFGSLAWPATQPRETFAKGAVYGVGSVERFTWKDLFDSFTCTEC 280 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNL----------EDPF 222 C +CP+ + L P ++ A + L+++ + R L Sbjct: 281 GRCQAACPATCT--GKPLNPRQIVHAIKTNLLENGPALREGRSGTLPLIGDEGEGTNTEE 338 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ C T C ++CP + I K++ L++ Sbjct: 339 AIWSCTTCGACMEACPVLIEQMPKIIKMRRHLVE 372 >gi|261884472|ref|ZP_06008511.1| succinate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 100 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYRCHT 229 + C C +CP+ + ++GPA L Q + + ERLD L L C Sbjct: 1 MTCGVCLEACPNVN-DKSNFIGPAPLSQVRLFNAHPTGAMNKDERLDALLQDGGLAECGN 59 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 NC +CPKG+ +IA + Sbjct: 60 AQNCVVACPKGIPLTTSIAALNRDA 84 >gi|291284353|ref|YP_003501171.1| Glycolate oxidase iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|290764226|gb|ADD58187.1| Glycolate oxidase iron-sulfur subunit [Escherichia coli O55:H7 str. CB9615] gi|320656354|gb|EFX24261.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661725|gb|EFX29133.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320666876|gb|EFX33852.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O157:H7 str. LSU-61] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|66046562|ref|YP_236403.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. syringae B728a] gi|63257269|gb|AAY38365.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 [Pseudomonas syringae pv. syringae B728a] Length = 410 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + RL L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVE 103 >gi|26990453|ref|NP_745878.1| glycolate oxidase iron-sulfur subunit [Pseudomonas putida KT2440] gi|24985424|gb|AAN69342.1|AE016571_8 glycolate oxidase, iron-sulfur subunit [Pseudomonas putida KT2440] Length = 411 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVKYHDLL-DIGRAVVEQQV 106 >gi|300950827|ref|ZP_07164712.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 116-1] gi|300449863|gb|EFK13483.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 116-1] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|238544557|dbj|BAH60909.1| putative iron-sulfur binding domain protein [Desulfotignum balticum] Length = 687 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 9/152 (5%) Query: 117 PHMSVIKDLVVDM-----SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 H VI + R + + + + Y C Sbjct: 248 KHFHVITSIFNVFFMRLDKGKIKPVRYGVSDEQLDDLESFGVKKLEDFTWKHMLDFYSCA 307 Query: 172 MCACCSTSCPSYWWN---SDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRC 227 C CS CP+ S R++ ++ S + ++ + L +++ ++ C Sbjct: 308 DCGRCSDQCPANAVGRPLSPRFITIKARDLIFKNYPLSGEIYKSKMLVEDIYTEDEIWSC 367 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T C + CP + I ++ ++D + Sbjct: 368 TTCGACEEECPLAIEYINKIVDLRRGMVDEGL 399 >gi|193061936|ref|ZP_03043032.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli E22] gi|209920446|ref|YP_002294530.1| glycolate oxidase iron-sulfur subunit [Escherichia coli SE11] gi|218696682|ref|YP_002404349.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 55989] gi|256019105|ref|ZP_05432970.1| glycolate oxidase iron-sulfur subunit [Shigella sp. D9] gi|260857110|ref|YP_003231001.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O26:H11 str. 11368] gi|260869732|ref|YP_003236134.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O111:H- str. 11128] gi|293449318|ref|ZP_06663739.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B088] gi|192932156|gb|EDV84754.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli E22] gi|209913705|dbj|BAG78779.1| glycolate oxidase iron-sulfur subunit [Escherichia coli SE11] gi|218353414|emb|CAU99471.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 55989] gi|257755759|dbj|BAI27261.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O26:H11 str. 11368] gi|257766088|dbj|BAI37583.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O111:H- str. 11128] gi|291322408|gb|EFE61837.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B088] gi|323178679|gb|EFZ64255.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 1180] gi|323946703|gb|EGB42724.1| cysteine-rich domain-containing protein [Escherichia coli H120] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|284922997|emb|CBG36089.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 042] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|49176294|ref|YP_026190.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109752|ref|AP_003532.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K-12 substr. W3110] gi|157162450|ref|YP_001459768.1| glycolate oxidase iron-sulfur subunit [Escherichia coli HS] gi|170018771|ref|YP_001723725.1| glycolate oxidase iron-sulfur subunit [Escherichia coli ATCC 8739] gi|170082525|ref|YP_001731845.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K-12 substr. DH10B] gi|188495133|ref|ZP_03002403.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli 53638] gi|238902096|ref|YP_002927892.1| glycolate oxidase iron-sulfur subunit [Escherichia coli BW2952] gi|253772184|ref|YP_003035015.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162924|ref|YP_003046032.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B str. REL606] gi|300923626|ref|ZP_07139655.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 182-1] gi|300958350|ref|ZP_07170492.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 175-1] gi|301643665|ref|ZP_07243705.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 146-1] gi|307139660|ref|ZP_07499016.1| glycolate oxidase iron-sulfur subunit [Escherichia coli H736] gi|312972770|ref|ZP_07786943.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 1827-70] gi|1707919|sp|P52074|GLCF_ECOLI RecName: Full=Glycolate oxidase iron-sulfur subunit gi|1141714|gb|AAB02532.1| glycolate oxidase subunit, (Fe-S)protein [Escherichia coli str. K-12 substr. W3110] gi|48994913|gb|AAT48157.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K-12 substr. MG1655] gi|85675785|dbj|BAE77038.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K12 substr. W3110] gi|157068130|gb|ABV07385.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli HS] gi|169753699|gb|ACA76398.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli ATCC 8739] gi|169890360|gb|ACB04067.1| glycolate oxidase iron-sulfur subunit [Escherichia coli str. K-12 substr. DH10B] gi|188490332|gb|EDU65435.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli 53638] gi|238861378|gb|ACR63376.1| glycolate oxidase iron-sulfur subunit [Escherichia coli BW2952] gi|242378528|emb|CAQ33313.1| glycolate oxidase, predicted iron-sulfur subunit, subunit of glycolate oxidase [Escherichia coli BL21(DE3)] gi|253323228|gb|ACT27830.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974825|gb|ACT40496.1| glycolate oxidase iron-sulfur subunit [Escherichia coli B str. REL606] gi|253978980|gb|ACT44650.1| glycolate oxidase iron-sulfur subunit [Escherichia coli BL21(DE3)] gi|260447981|gb|ACX38403.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli DH1] gi|300314993|gb|EFJ64777.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 175-1] gi|300420143|gb|EFK03454.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 182-1] gi|301077956|gb|EFK92762.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 146-1] gi|309703406|emb|CBJ02745.1| glycolate oxidase iron-sulfur subunit [Escherichia coli ETEC H10407] gi|310332712|gb|EFP99925.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 1827-70] gi|315137574|dbj|BAJ44733.1| glycolate oxidase iron-sulfur subunit [Escherichia coli DH1] gi|323936025|gb|EGB32320.1| cysteine-rich domain-containing protein [Escherichia coli E1520] gi|323941928|gb|EGB38107.1| cysteine-rich domain-containing protein [Escherichia coli E482] gi|332344929|gb|AEE58263.1| glycolate oxidase iron-sulfur protein subunit [Escherichia coli UMNK88] Length = 407 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|170680842|ref|YP_001745235.1| glycolate oxidase iron-sulfur subunit [Escherichia coli SMS-3-5] gi|170518560|gb|ACB16738.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli SMS-3-5] Length = 407 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|320195120|gb|EFW69749.1| Glycolate dehydrogenase , iron-sulfur subunit GlcF [Escherichia coli WV_060327] Length = 407 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|307310395|ref|ZP_07590043.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli W] gi|331669787|ref|ZP_08370632.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA271] gi|306909290|gb|EFN39785.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli W] gi|315062290|gb|ADT76617.1| glycolate oxidase iron-sulfur subunit [Escherichia coli W] gi|323377126|gb|ADX49394.1| protein of unknown function DUF224 cysteine-rich region domain protein [Escherichia coli KO11] gi|331062700|gb|EGI34614.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA271] Length = 407 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|218555545|ref|YP_002388458.1| glycolate oxidase iron-sulfur subunit [Escherichia coli IAI1] gi|218362313|emb|CAQ99934.1| glycolate oxidase iron-sulfur subunit [Escherichia coli IAI1] Length = 407 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|294828162|ref|NP_712893.2| Fe-S oxidoreductase [Leptospira interrogans serovar Lai str. 56601] gi|293386009|gb|AAN49911.2| Fe-S oxidoreductase [Leptospira interrogans serovar Lai str. 56601] Length = 696 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 27/134 (20%) Query: 147 SPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-L 203 + + ED + L C+ C C CP+ + L P ++ + L Sbjct: 273 EDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRT--GKVLNPKAIIADLKHAL 330 Query: 204 IDSRDEFQGERLDNLE----------------------DPFRLYRCHTIMNCTQSCPKGL 241 +D E R + + L+ C T C ++CP G Sbjct: 331 LDKMPEVAKIRTEETDAAVAAEKVAALDTAVINSYEGLSEEALWGCTTCYACVEACPVGN 390 Query: 242 NPAKAIAKIKMMLL 255 N AI +++ L+ Sbjct: 391 NQVNAIMEMRRHLV 404 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 5/37 (13%) Query: 226 RCHTIMNCTQSCPKG-----LNPAKAIAKIKMMLLDR 257 C C CP LNP IA +K LLD+ Sbjct: 297 SCIECGRCQVQCPANRTGKVLNPKAIIADLKHALLDK 333 >gi|45657174|ref|YP_001260.1| hypothetical protein LIC11294 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600412|gb|AAS69897.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 699 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 27/134 (20%) Query: 147 SPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-L 203 + + ED + L C+ C C CP+ + L P ++ + L Sbjct: 276 EDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRT--GKVLNPKAIIADLKHAL 333 Query: 204 IDSRDEFQGERLDNLE----------------------DPFRLYRCHTIMNCTQSCPKGL 241 +D E R + + L+ C T C ++CP G Sbjct: 334 LDKMPEVAKIRTEETDAAVAAEKVAALDTAVINSYEGLSEEALWGCTTCYACVEACPVGN 393 Query: 242 NPAKAIAKIKMMLL 255 N AI +++ L+ Sbjct: 394 NQVNAIMEMRRHLV 407 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 5/37 (13%) Query: 226 RCHTIMNCTQSCPKG-----LNPAKAIAKIKMMLLDR 257 C C CP LNP IA +K LLD+ Sbjct: 300 SCIECGRCQVQCPANRTGKVLNPKAIIADLKHALLDK 336 >gi|167033163|ref|YP_001668394.1| glycolate oxidase iron-sulfur subunit [Pseudomonas putida GB-1] gi|166859651|gb|ABY98058.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudomonas putida GB-1] Length = 411 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + +L L R Sbjct: 22 LRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGKPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVKYHDLL-DIGRAVVEQQV 106 >gi|124266154|ref|YP_001020158.1| glycolate oxidase iron-sulfur subunit [Methylibium petroleiphilum PM1] gi|124258929|gb|ABM93923.1| putative glycolate oxidase (iron-sulfur subunit) protein [Methylibium petroleiphilum PM1] Length = 411 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 E + L CV C C+ +CP+Y + GP + + + + + + Sbjct: 9 FHGDREAAEAEAILRSCVHCGFCTATCPTYQLEGNELDGPRGRIYLIKQVFEGGEASRS- 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T NC +CP G++ + + I ++D ++ Sbjct: 68 ------TQRHLDRCLTCRNCETTCPSGVHYGRLV-DIGRQVVDARV 106 >gi|323173787|gb|EFZ59416.1| glycolate oxidase iron-sulfur subunit [Escherichia coli LT-68] Length = 399 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 1 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 57 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 58 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 98 >gi|306816687|ref|ZP_07450819.1| glycolate oxidase iron-sulfur subunit [Escherichia coli NC101] gi|331654581|ref|ZP_08355581.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli M718] gi|305850252|gb|EFM50711.1| glycolate oxidase iron-sulfur subunit [Escherichia coli NC101] gi|331047963|gb|EGI20040.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli M718] Length = 407 Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|331011190|gb|EGH91246.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 410 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHTRTLPRAEEAEHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + RL L RC + NC +CP G++ + I ++ Sbjct: 62 QQVTEKTRL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|293604348|ref|ZP_06686755.1| glycolate oxidase [Achromobacter piechaudii ATCC 43553] gi|292817225|gb|EFF76299.1| glycolate oxidase [Achromobacter piechaudii ATCC 43553] Length = 411 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ + Q L R Sbjct: 22 LRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQVLEGAEPTQS-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ I I ++D ++ Sbjct: 75 CLTCRNCETTCPSGVQYGHLI-DIGRKIVDERV 106 >gi|121997032|ref|YP_001001819.1| glycolate oxidase iron-sulfur subunit [Halorhodospira halophila SL1] gi|121588437|gb|ABM61017.1| protein of unknown function DUF224, cysteine-rich region domain protein [Halorhodospira halophila SL1] Length = 401 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + + R + L +C C C +CP+Y D P + + +++ Sbjct: 2 ETRIQRNHRDTPAGRDAEEILRKCTHCGFCLATCPTYQLQGDELDSPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + L RC T C +CP G+ K + + L++ Sbjct: 62 QTPGPR-------TQHHLDRCLTCRACETTCPSGVEYGKLL-DLGRELVEE 104 >gi|330986389|gb|EGH84492.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 410 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|330813427|ref|YP_004357666.1| glycolate dehydrogenase , iron-sulfur subunit GlcF [Candidatus Pelagibacter sp. IMCC9063] gi|327486522|gb|AEA80927.1| glycolate dehydrogenase , iron-sulfur subunit GlcF [Candidatus Pelagibacter sp. IMCC9063] Length = 432 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K+ + E + D L +CV C C+ +CP++ D GP + + +I++ Sbjct: 2 QTNFTKKQQEDPEIKNTEDILRKCVHCGMCNATCPTFQVLGDELDGPRGRIYLIKDMIEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + C +CP G+N I + + Sbjct: 62 NKAPTEKVVKHID------RCLSCYACMTTCPSGVNYMHIIDHGRNHI 103 >gi|94311861|ref|YP_585071.1| glycolate oxidase iron-sulfur subunit [Cupriavidus metallidurans CH34] gi|93355713|gb|ABF09802.1| glycolate oxidase iron-sulfur subunit [Cupriavidus metallidurans CH34] Length = 423 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E + + +CV C C+ +CP+Y D GP + + +++ + R Sbjct: 10 RNTPEGEEAKSIVGKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGNPVTESTR 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T NC +CP G+ + I ++D ++ Sbjct: 70 L-------HLDRCLTCRNCESTCPSGVTYG-HLVDIGRKIVDDRL 106 >gi|71734877|ref|YP_275414.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555430|gb|AAZ34641.1| glycolate oxidase, iron-sulfur subunit [Pseudomonas syringae pv. phaseolicola 1448A] Length = 410 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|332998914|gb|EGK18505.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri VA-6] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|331674527|ref|ZP_08375287.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA280] gi|331068621|gb|EGI40016.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA280] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|331664584|ref|ZP_08365490.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA143] gi|331058515|gb|EGI30496.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA143] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|331659252|ref|ZP_08360194.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA206] gi|315297654|gb|EFU56931.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 16-3] gi|331053834|gb|EGI25863.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli TA206] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|301325688|ref|ZP_07219149.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 78-1] gi|300847543|gb|EFK75303.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 78-1] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|293412348|ref|ZP_06655071.1| glcF [Escherichia coli B354] gi|291469119|gb|EFF11610.1| glcF [Escherichia coli B354] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|301017335|ref|ZP_07182099.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 69-1] gi|300400308|gb|EFJ83846.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 69-1] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|299134187|ref|ZP_07027380.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] gi|298590934|gb|EFI51136.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] Length = 449 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + L +CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTDFSPAQLADPDIAEANTILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + E + +++ RC + + C +CP G+N I + ++ + + Sbjct: 62 DQKPTAEVVKHVD------RCLSCLACMTTCPSGVNYMHLIDQARVRVEE 105 >gi|323960843|gb|EGB56463.1| cysteine-rich domain-containing protein [Escherichia coli H489] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|332530418|ref|ZP_08406362.1| glycolate oxidase iron-sulfur subunit [Hylemonella gracilis ATCC 19624] gi|332040130|gb|EGI76512.1| glycolate oxidase iron-sulfur subunit [Hylemonella gracilis ATCC 19624] Length = 429 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D GP + + +++ + +L L R Sbjct: 22 LRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGEAPTRSTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + + I +++ K+ Sbjct: 75 CLTCRNCESTCPSGVQYGQLV-DIGRKIVEDKV 106 >gi|330888926|gb|EGH21587.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. mori str. 301020] Length = 410 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|323188601|gb|EFZ73886.1| glycolate oxidase iron-sulfur subunit [Escherichia coli RN587/1] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|297519599|ref|ZP_06937985.1| glycolate oxidase iron-sulfur subunit [Escherichia coli OP50] Length = 279 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +E+ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|289649802|ref|ZP_06481145.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|298487691|ref|ZP_07005732.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157783|gb|EFH98862.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 410 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|332999729|gb|EGK19313.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri K-272] gi|333015593|gb|EGK34932.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri K-227] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|324005444|gb|EGB74663.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 57-2] Length = 407 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|282863743|ref|ZP_06272801.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces sp. ACTE] gi|282561444|gb|EFB66988.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces sp. ACTE] Length = 755 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 48/176 (27%), Gaps = 40/176 (22%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYECVMCAC 175 D V + + + A + E C C Sbjct: 248 WFKRNADGGVALGALQPMTTGGKEIDWEDPAEDAVFGVSQVEQFSWKGILDFSTCTECGR 307 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEFQGERLDNL-- 218 C + CP+ WN+ + L P +L+ + R ++ E+L ++ Sbjct: 308 CQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKDMEGEEKATEEQLKDVPA 365 Query: 219 -------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C T C + CP + I ++ + Sbjct: 366 SALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 421 >gi|302543757|ref|ZP_07296099.1| ferredoxin, 4Fe-4S [Streptomyces hygroscopicus ATCC 53653] gi|302461375|gb|EFL24468.1| ferredoxin, 4Fe-4S [Streptomyces himastatinicus ATCC 53653] Length = 754 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 40/193 (20%) Query: 101 VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 DM +P D V + +P + A+ + E Sbjct: 231 KTDMGVAWHRFLAFPNIWFKREADGDVALGELLPMVSEGKPIDFEDPDEDAQFGVSQIEH 290 Query: 161 RQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID------------- 205 C C C + CP+ WN+ + L P +L+ + R Sbjct: 291 FSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKD 348 Query: 206 --SRDEFQGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLN 242 ++ E+L ++ DP L+ C T C + CP + Sbjct: 349 AEGEEKATEEQLKDVPASALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIE 408 Query: 243 PAKAIAKIKMMLL 255 I ++ + Sbjct: 409 HIDHIVDMRRYQV 421 >gi|171057857|ref|YP_001790206.1| glycolate oxidase iron-sulfur subunit [Leptothrix cholodnii SP-6] gi|170775302|gb|ACB33441.1| protein of unknown function DUF224 cysteine-rich region domain protein [Leptothrix cholodnii SP-6] Length = 418 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D P + + +++ + + L R Sbjct: 22 LRKCVHCGFCTATCPTYQLLGDELDSPRGRIYLIKQMLEGQTPTRS-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + + +I L+D ++ Sbjct: 75 CLTCRNCESTCPSGVPYGELV-EIGRRLVDAEV 106 >gi|320328061|gb|EFW84066.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 410 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|281180011|dbj|BAI56341.1| glycolate oxidase iron-sulfur subunit [Escherichia coli SE15] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|218706599|ref|YP_002414118.1| glycolate oxidase iron-sulfur subunit [Escherichia coli UMN026] gi|293406587|ref|ZP_06650513.1| glcF [Escherichia coli FVEC1412] gi|298382328|ref|ZP_06991925.1| glycolate oxidase iron-sulfur subunit [Escherichia coli FVEC1302] gi|300900307|ref|ZP_07118486.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 198-1] gi|218433696|emb|CAR14611.1| glycolate oxidase iron-sulfur subunit [Escherichia coli UMN026] gi|291426593|gb|EFE99625.1| glcF [Escherichia coli FVEC1412] gi|298277468|gb|EFI18984.1| glycolate oxidase iron-sulfur subunit [Escherichia coli FVEC1302] gi|300356197|gb|EFJ72067.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 198-1] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + +++ Q+ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTRLTEDMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 62 NEVT-------LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|167564004|ref|ZP_02356920.1| glycolate oxidase iron-sulfur subunit [Burkholderia oklahomensis EO147] gi|167571149|ref|ZP_02364023.1| glycolate oxidase iron-sulfur subunit [Burkholderia oklahomensis C6786] Length = 408 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDDADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 ADVSRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|191171853|ref|ZP_03033399.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli F11] gi|218560046|ref|YP_002392959.1| glycolate oxidase iron-sulfur subunit [Escherichia coli S88] gi|237706282|ref|ZP_04536763.1| glycolate oxidase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|300993072|ref|ZP_07180180.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 200-1] gi|190907888|gb|EDV67481.1| glycolate oxidase, iron-sulfur subunit GlcF [Escherichia coli F11] gi|218366815|emb|CAR04584.1| glycolate oxidase iron-sulfur subunit [Escherichia coli S88] gi|222034693|emb|CAP77435.1| glycolate oxidase iron-sulfur subunit [Escherichia coli LF82] gi|226899322|gb|EEH85581.1| glycolate oxidase iron-sulfur subunit [Escherichia sp. 3_2_53FAA] gi|294490651|gb|ADE89407.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli IHE3034] gi|300305196|gb|EFJ59716.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 200-1] gi|307625427|gb|ADN69731.1| glycolate oxidase iron-sulfur subunit [Escherichia coli UM146] gi|312947531|gb|ADR28358.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315288704|gb|EFU48102.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 110-3] gi|323951507|gb|EGB47382.1| cysteine-rich domain-containing protein [Escherichia coli H252] gi|323957879|gb|EGB53593.1| cysteine-rich domain-containing protein [Escherichia coli H263] gi|324011861|gb|EGB81080.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 60-1] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|320323924|gb|EFW80008.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|289628992|ref|ZP_06461946.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867714|gb|EGH02423.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 410 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L RC + NC +CP G++ + I ++ Sbjct: 72 LDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|257484757|ref|ZP_05638798.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 384 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHTRTLPRAEEAEHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + RL L RC + NC +CP G++ + I ++ Sbjct: 62 QQVTEKTRL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|215488296|ref|YP_002330727.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O127:H6 str. E2348/69] gi|312968698|ref|ZP_07782907.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 2362-75] gi|215266368|emb|CAS10805.1| glycolate oxidase iron-sulfur subunit [Escherichia coli O127:H6 str. E2348/69] gi|312286916|gb|EFR14827.1| glycolate oxidase iron-sulfur subunit [Escherichia coli 2362-75] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|322417936|ref|YP_004197159.1| hypothetical protein GM18_0397 [Geobacter sp. M18] gi|320124323|gb|ADW11883.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 658 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 15/156 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP + L + ++ + K A+ + + D L C C Sbjct: 220 LPRSKHMHILTAIPNCYFRSIEKPNVQPRETFAKEARYGVSEVDQFSWKDLLDSFSCTEC 279 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-----------EDPF 222 C CP++ + L P ++ + + + L Sbjct: 280 GRCQDVCPAFSTGKE--LNPRRIVHDIKVNLMENGAGLQQGLKAAAPLIGRKQEGTIGEE 337 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C CP + I K++ L++ K Sbjct: 338 CLWDCTTCGACVNVCPVLIEHMPKIVKMRRHLVEEK 373 >gi|323966501|gb|EGB61934.1| cysteine-rich domain-containing protein [Escherichia coli M863] gi|327251754|gb|EGE63440.1| glycolate oxidase iron-sulfur subunit [Escherichia coli STEC_7v] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + L+ L R Sbjct: 22 LRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT-------LKTQEHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++K+ Sbjct: 75 CLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|323978955|gb|EGB74035.1| cysteine-rich domain-containing protein [Escherichia coli TW10509] Length = 407 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + L+ L R Sbjct: 22 LRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT-------LKTQEHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++K+ Sbjct: 75 CLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|325982750|ref|YP_004295152.1| hypothetical protein NAL212_2158 [Nitrosomonas sp. AL212] gi|325532269|gb|ADZ26990.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosomonas sp. AL212] Length = 416 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K A + S + ++ L CV C C +CP+Y D P + + +++ Sbjct: 2 QTKLADFIKNSPQGQEADAILRSCVHCGFCLATCPTYQILGDELDSPRGRIYLMKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + Q +L L RC T C +CP G+ A+ I ++++++ Sbjct: 62 QPITQKTQL-------HLDRCLTCRACETTCPSGVRYG-ALVDISRGIVEKQV 106 >gi|331648761|ref|ZP_08349849.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli M605] gi|330909033|gb|EGH37547.1| glycolate dehydrogenase , iron-sulfur subunit GlcF [Escherichia coli AA86] gi|331042508|gb|EGI14650.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli M605] Length = 407 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNVRALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|301048217|ref|ZP_07195252.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 185-1] gi|300299911|gb|EFJ56296.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli MS 185-1] Length = 407 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 106 >gi|330508757|ref|YP_004385185.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanosaeta concilii GP-6] gi|328929565|gb|AEB69367.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanosaeta concilii GP-6] Length = 354 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q CV C C T CP++ + + + L R + G+ L +L Sbjct: 6 QDKRAFNLCVRCGTCRTVCPAFLESGWESANTRGRMMIIKELTSGRLQADGDVLRSLNT- 64 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C T CT++CP G++P + I + + ML Sbjct: 65 -----CTTCGLCTENCPAGISPPEIIERARRMLA 93 >gi|253701319|ref|YP_003022508.1| hypothetical protein GM21_2714 [Geobacter sp. M21] gi|251776169|gb|ACT18750.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 664 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI----DSRDEFQGERLD 216 + + + C C C +CP+ ++ + L P ++ A + + + E + L Sbjct: 268 WKDLFDSFSCTECGRCQAACPA--ASTGKALNPRQIVHAIKTNLLENSHALREGRKGTLP 325 Query: 217 NL-------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C T C ++CP + I K++ L+ Sbjct: 326 LIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQMPKIVKMRRHLVQ 372 >gi|197117889|ref|YP_002138316.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197087249|gb|ACH38520.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 664 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI----DSRDEFQGERLD 216 + + + C C C +CP+ ++ + L P ++ A + + + E + L Sbjct: 268 WKDLFDSFSCTECGRCQAACPA--ASTGKALNPRQIVHAIKTNLLENSHALREGRKGTLP 325 Query: 217 NL-------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C T C ++CP + I K++ L+ Sbjct: 326 LIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQMPKIVKMRRHLVQ 372 >gi|317506767|ref|ZP_07964546.1| cysteine-rich domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316254932|gb|EFV14223.1| cysteine-rich domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 1081 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 28/138 (20%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P + ED + C C C + CP+ WN+ + L P +L+ + R Sbjct: 270 EEADPDEDSFGVGKVEDFTWKNLLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLITSLR 327 Query: 202 WLID-------SRDEF------QGER-----------LDNLEDPFRLYRCHTIMNCTQSC 237 D+ + ER L + DP L+ C T C + C Sbjct: 328 DHAYAKAPYLLGGDKAPASAVAEAERPIVGGVGEDGALGGVIDPEVLWSCTTCGACVEQC 387 Query: 238 PKGLNPAKAIAKIKMMLL 255 P + I ++ + Sbjct: 388 PVDIEHVDHIIDLRRHQV 405 >gi|182437229|ref|YP_001824948.1| putative iron-sulphur-binding reductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465745|dbj|BAG20265.1| putative iron-sulphur-binding reductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 755 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPADDAVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKDMEGNEKATEEKLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|237799402|ref|ZP_04587863.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022258|gb|EGI02315.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 410 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHARKQPRAEEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC + NC +CP G++ + I +D + Sbjct: 62 HEVTEKTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDAAV 106 >gi|305666570|ref|YP_003862857.1| hypothetical protein FB2170_09901 [Maribacter sp. HTCC2170] gi|88708841|gb|EAR01076.1| hypothetical protein FB2170_09901 [Maribacter sp. HTCC2170] Length = 441 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 58/155 (37%), Gaps = 27/155 (17%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++++ M + + P +P+ + ++ Y C C C++ C Sbjct: 262 VTKEVMLMMDPSADPYAA--PTEDAAAPEKFGASDVKDLNWVQLLNAYTCTECGRCTSEC 319 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRD-----------------EFQGERLDNLEDPFR 223 P+ + L P + ++D+RD + + L + Sbjct: 320 PANLT--GKKLSPR------KIMMDTRDRLEEVGKNIDANKGDFIDDGKQLLGDYITNEE 371 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + CT++CP ++P I ++ L+ + Sbjct: 372 LWACTSCNACTEACPVSIDPLSIIMDMRQFLVMEQ 406 >gi|226311107|ref|YP_002771001.1| hypothetical protein BBR47_15200 [Brevibacillus brevis NBRC 100599] gi|226094055|dbj|BAH42497.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 451 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 6/100 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + D L C+ C C +CP++ P + + + D E + +D + Sbjct: 19 EKKLDYDELSNCMRCGFCQPACPTFRETGYEAASPRGRIALMKAVADGVMEPDKDFVDQM 78 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP G+ + I + + + + + Sbjct: 79 N------LCLGCRACEPVCPAGVPYGQLIEQTREAIEEAQ 112 >gi|330976127|gb|EGH76193.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 387 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + R+ L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRV-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|325955061|ref|YP_004238721.1| hypothetical protein Weevi_1442 [Weeksella virosa DSM 16922] gi|323437679|gb|ADX68143.1| hypothetical protein Weevi_1442 [Weeksella virosa DSM 16922] Length = 443 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 27/110 (24%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-- 223 Y C C C++ CP+ + L P + ++D+RD + L++ Sbjct: 308 NAYTCTECGRCTSECPANIT--GKKLSPR------KIMMDTRDRL-EDVSKILDNNNGQW 358 Query: 224 ----------------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ C + CTQ+CP ++P I ++ L+ Sbjct: 359 VDDGKTLLNDYITTEELWACTSCNACTQACPVNIDPLSIIVDLRRYLVME 408 >gi|15600546|ref|NP_254040.1| glycolate oxidase iron-sulfur subunit [Pseudomonas aeruginosa PAO1] gi|9951673|gb|AAG08738.1|AE004947_8 glycolate oxidase subunit GlcF [Pseudomonas aeruginosa PAO1] Length = 408 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|146305242|ref|YP_001185707.1| glycolate oxidase iron-sulfur subunit [Pseudomonas mendocina ymp] gi|145573443|gb|ABP82975.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pseudomonas mendocina ymp] Length = 405 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQMLEGGEVTAK-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C T NC +CP G+ + I L++ Sbjct: 75 CLTCRNCETTCPSGVQYHDLL-DIGRELVE 103 >gi|119718623|ref|YP_925588.1| hypothetical protein Noca_4404 [Nocardioides sp. JS614] gi|119539284|gb|ABL83901.1| protein of unknown function DUF224, cysteine-rich region domain protein [Nocardioides sp. JS614] Length = 1033 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------------WLIDSR 207 + C C C + CP+ WN+++ L P +++ A R L++ Sbjct: 294 DMATCTECGRCQSQCPA--WNTEKPLSPKLMIMALRDASFAKAPYLLADEGKRAGLLEGS 351 Query: 208 DEFQGERLD------------------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D E + DP L+ C T C + CP + I Sbjct: 352 DTLTKEVERPLVGDTGDEWFYMPEDGSAVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVD 411 Query: 250 IKMMLL 255 ++ + Sbjct: 412 MRRYQV 417 >gi|147677889|ref|YP_001212104.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] gi|146273986|dbj|BAF59735.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] Length = 649 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 63/146 (43%), Gaps = 7/146 (4%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRS-IEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 + + + + ++ ++ FY + + T+S + S R+++ + Sbjct: 219 LTITAMGWTKLSHIIIAPLNMFYQTEQVLGKLRDITISEEYVGADKLSDFTRKQLLSIDA 278 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C +CP++ NS++ L P ++++ + + D ++ + + + ++ C T Sbjct: 279 CVSAGFCELNCPAF--NSNKPLSPRLIMEKLQMVRD----YKASLVGEIINKEEIWSCTT 332 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLL 255 C Q CP NP + I ++ + Sbjct: 333 CGACQQKCPVLSNPMEKIIDLRRYQV 358 >gi|107104455|ref|ZP_01368373.1| hypothetical protein PaerPA_01005532 [Pseudomonas aeruginosa PACS2] Length = 408 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|254243762|ref|ZP_04937084.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa 2192] gi|126197140|gb|EAZ61203.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa 2192] Length = 408 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|254237955|ref|ZP_04931278.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa C3719] gi|126169886|gb|EAZ55397.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa C3719] Length = 408 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|116053500|ref|YP_793827.1| glycolate oxidase iron-sulfur subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|115588721|gb|ABJ14736.1| glycolate oxidase, iron-sulfur subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 408 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|218894456|ref|YP_002443326.1| glycolate oxidase iron-sulfur subunit [Pseudomonas aeruginosa LESB58] gi|218774685|emb|CAW30502.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa LESB58] Length = 408 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|197106480|ref|YP_002131857.1| glycolate oxidase iron-sulfur subunit [Phenylobacterium zucineum HLK1] gi|196479900|gb|ACG79428.1| glycolate oxidase iron-sulfur subunit [Phenylobacterium zucineum HLK1] Length = 431 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L E + CV C C+ +CP+Y D P ++ R +++S Sbjct: 2 KTNFSPERLADPEVAASQQEIRRCVHCGFCTATCPTYVLLGDERDSPRGRIELIRAMLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + +++ RC + ++C +CP G++ + I + + Sbjct: 62 DAPPTRATVTHID------RCLSCLSCVSTCPSGVDYGRLIDHARAHV 103 >gi|170721381|ref|YP_001749069.1| glycolate oxidase iron-sulfur subunit [Pseudomonas putida W619] gi|169759384|gb|ACA72700.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudomonas putida W619] Length = 411 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVRYHDLL-DIGRAVVEQQV 106 >gi|289678777|ref|ZP_06499667.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. syringae FF5] Length = 204 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + R+ L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRV-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|330810632|ref|YP_004355094.1| glycolate oxidase (iron-sulfur), subunit F [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378740|gb|AEA70090.1| Glycolate oxidase (iron-sulfur), subunit F [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 406 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + +L L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPATASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + NC +CP G++ + I ++D+ + Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAVVDQAV 106 >gi|295837945|ref|ZP_06824878.1| ferredoxin, 4Fe-4S [Streptomyces sp. SPB74] gi|197699172|gb|EDY46105.1| ferredoxin, 4Fe-4S [Streptomyces sp. SPB74] Length = 758 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 40/193 (20%) Query: 101 VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 +M +P D V + +P + + E Sbjct: 231 NTNMGVAWHRFLAFPNIWFKRNADGAVSLGALRPMTSGGKPIDWEDPGEDDVFGVSQVEH 290 Query: 161 RQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID------------- 205 C C C + CP+ WN+ + L P +L+ + R Sbjct: 291 FSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKT 348 Query: 206 --SRDEFQGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLN 242 ++ E+L ++ DP L+ C T C + CP + Sbjct: 349 MEGEEKASEEQLKDVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIE 408 Query: 243 PAKAIAKIKMMLL 255 I ++ + Sbjct: 409 HIDHIVDMRRYQV 421 >gi|296392213|ref|ZP_06881688.1| glycolate oxidase iron-sulfur subunit [Pseudomonas aeruginosa PAb1] Length = 408 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|326777862|ref|ZP_08237127.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces cf. griseus XylebKG-1] gi|326658195|gb|EGE43041.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces cf. griseus XylebKG-1] Length = 755 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPADDAVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKDMEGNEKATEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|121610252|ref|YP_998059.1| glycolate oxidase iron-sulfur subunit [Verminephrobacter eiseniae EF01-2] gi|121554892|gb|ABM59041.1| protein of unknown function DUF224, cysteine-rich region domain protein [Verminephrobacter eiseniae EF01-2] Length = 412 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A E + + L +CV C CS +CP+Y D P + + +++ Sbjct: 2 QTRLAPEYRDRADGLEAEAILRQCVHCGFCSATCPTYQLLGDELDSPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ + I ++D ++ Sbjct: 62 EAPSRKTQL-------HLDRCLTCRNCESTCPSGVQYGHLL-DIGRKIVDEQV 106 >gi|72160599|ref|YP_288256.1| iron-sulfur-binding reductase [Thermobifida fusca YX] gi|71914331|gb|AAZ54233.1| putative iron-sulphur-binding reductase [Thermobifida fusca YX] Length = 716 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 42/140 (30%), Gaps = 29/140 (20%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P + ED C C C + CP+ WN+ + L P L+ Sbjct: 270 FEEADPDEDPFGVGKIEDFTWKGLLDFTTCTECGRCQSQCPA--WNTGKPLSPKKLVMDL 327 Query: 201 R--------WLIDSRDEFQ----GERLDNL-------EDPFR------LYRCHTIMNCTQ 235 R +L+ E + L L E+ L+ C C + Sbjct: 328 REHAYAKAPYLMQGITEETPDIHEDVLALLSRPLVGTEEENGVIHPDVLWSCTNCGACVE 387 Query: 236 SCPKGLNPAKAIAKIKMMLL 255 CP + I ++ + Sbjct: 388 QCPVDIEHIDHILDMRRYQV 407 >gi|320009900|gb|ADW04750.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces flavogriseus ATCC 33331] Length = 755 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDTFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKDMEGNEKATEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|300313119|ref|YP_003777211.1| glycolate oxidase iron-sulfur subunit oxidoreductase [Herbaspirillum seropedicae SmR1] gi|300075904|gb|ADJ65303.1| glycolate oxidase, iron-sulfur subunit oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 414 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + ++ L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTQAGQEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T NC +CP G+ + + I +++ ++ Sbjct: 62 KPATAA-------TQSHLDRCLTCRNCESTCPSGVQYGRLV-DIGRKVVEEQV 106 >gi|85714230|ref|ZP_01045218.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gi|85698677|gb|EAQ36546.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 437 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + L+ + + L +CV C C+ +CP+Y D P + + ++++ Sbjct: 3 TEFTPAQLRDPDIAEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKRMLENN 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E + +++ RC + + C +CP G+N + + ++ + Sbjct: 63 EPPTAEVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARVRIEKE 106 >gi|323524800|ref|YP_004226953.1| hypothetical protein BC1001_0431 [Burkholderia sp. CCGE1001] gi|323381802|gb|ADX53893.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1001] Length = 408 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGAEADAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q R + L RC T NC +CP G+ K + +I + + K+ Sbjct: 62 ---AQVTRSTQVH----LDRCLTCRNCETTCPSGVQYGKLV-EIGRKITEEKV 106 >gi|289209055|ref|YP_003461121.1| hypothetical protein TK90_1894 [Thioalkalivibrio sp. K90mix] gi|288944686|gb|ADC72385.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. K90mix] Length = 421 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + R D L CV C C+ +CP+Y D GP + + +++S Sbjct: 2 ETRLHERFANDPAARIAEDALRACVHCGFCNATCPTYQELGDEVDGPRGRIYQIKEILES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + R L RC T +NC +CP G++ +A + ++ Sbjct: 62 GEANPTAR-------THLDRCLTCLNCMTTCPSGVDYNHLVAYGREVI 102 >gi|239989416|ref|ZP_04710080.1| putative iron-sulphur-binding reductase [Streptomyces roseosporus NRRL 11379] Length = 755 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPAEDAVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEEKATEEQLKDVPASALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|239942955|ref|ZP_04694892.1| putative iron-sulphur-binding reductase [Streptomyces roseosporus NRRL 15998] gi|291446427|ref|ZP_06585817.1| Iron-sulfur-binding reductase [Streptomyces roseosporus NRRL 15998] gi|291349374|gb|EFE76278.1| Iron-sulfur-binding reductase [Streptomyces roseosporus NRRL 15998] Length = 755 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPAEDAVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEEKATEEQLKDVPASALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|222055518|ref|YP_002537880.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221564807|gb|ACM20779.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 661 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ + + C+ C C CP+ + +++ +L + R E E L Sbjct: 281 RKNLLDISTCLKCGRCHEVCPAAQT-GKKLSPKGVMVTLAEYLHEGRME--DESLLETIT 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C T C ++CP +N AI +++ LL + Sbjct: 338 TDAIFNCTTCAACMEACPVAVNQPNAILRMRQHLLMER 375 >gi|316932677|ref|YP_004107659.1| hypothetical protein Rpdx1_1303 [Rhodopseudomonas palustris DX-1] gi|315600391|gb|ADU42926.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodopseudomonas palustris DX-1] Length = 437 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + + L CV C C+ +CP+Y D P + + ++ S Sbjct: 2 KTEFSLTQLADPDIAEADRILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLQS 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + +++ RC + + C +CP G+N + + + + + Sbjct: 62 DQPPTADVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARARIEKQ 106 >gi|78223272|ref|YP_385019.1| hypothetical protein Gmet_2065 [Geobacter metallireducens GS-15] gi|78194527|gb|ABB32294.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 658 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 14/195 (7%) Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV---YPLPHMSVIKDLVVDMSHFYS 134 S G + + + + LP + L + ++ Sbjct: 179 WKPVSSAIASLLDGFSGNPLESIATISWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFR 238 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLG 192 + + + + E D L C C C CP++ Sbjct: 239 SLDKPNVQPREEFKVGNRFGVSTVEQFSWKDLLDSLSCTECGRCQDLCPAHNTGKPLNPR 298 Query: 193 PAILLQAYRWLIDSRDEFQGERL---------DNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + + + G+R + L+ C T CT CP + Sbjct: 299 RIVHDIKVNLMDNGAALKHGDRGIVPLIGPQGEGSNHEDALWSCTTCGACTSVCPVLIEQ 358 Query: 244 AKAIAKIKMMLLDRK 258 I K++ L+ K Sbjct: 359 MPKIIKMRRHLVQEK 373 >gi|71082981|ref|YP_265700.1| (S)-2-hydroxy-acid oxidase [Candidatus Pelagibacter ubique HTCC1062] gi|71062094|gb|AAZ21097.1| (S)-2-hydroxy-acid oxidase [Candidatus Pelagibacter ubique HTCC1062] Length = 431 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ L+ ++ + +CV C C+ +CP++ D GP + + ++++ Sbjct: 2 QTNFTEKQLKDSDNAETEKIFKKCVHCGFCNATCPTHQIFGDELDGPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + + +++ RC + +C +CP G+N I K + Sbjct: 62 QKKPTAKTVKHID------RCLSCYSCMTTCPAGVNYMHIIDHGKKYIEK 105 >gi|114321047|ref|YP_742730.1| glycolate oxidase iron-sulfur subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227441|gb|ABI57240.1| protein of unknown function DUF224, cysteine-rich region domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 404 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + R+ L C C C +CP+Y + P + + +++ Sbjct: 2 QTHIADSIKDTDAGREAERILRTCTHCGFCLATCPTYQELGNELDSPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T C +CP G+ +K A I L++ ++ Sbjct: 62 HEPSAETQL-------HLDRCLTCRACESTCPSGVQYSKL-ADIGRELVEEQV 106 >gi|206889331|ref|YP_002248507.1| iron-sulfur cluster-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741269|gb|ACI20326.1| iron-sulfur cluster-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 707 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 7/145 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + LP + + + +S +R I+ K +C+ Sbjct: 245 IKALPRSATAQLITSYISFVTKPYRHIDGSQKEFHIILFDNNRSVIAKDPIFKQSLQCIR 304 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C CP + G L E L +D L C N Sbjct: 305 CASCLNVCPVFRLIGGHVFGKVYTGGIGTIL-----TAWTEGLKASKDIQGL--CIQCGN 357 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP ++ + I +I+ L Sbjct: 358 CVRVCPGKIDIPELILEIRKRLAKE 382 >gi|152986791|ref|YP_001351446.1| glycolate oxidase iron-sulfur subunit [Pseudomonas aeruginosa PA7] gi|150961949|gb|ABR83974.1| glycolate oxidase subunit GlcF [Pseudomonas aeruginosa PA7] Length = 408 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 L CV C C+ +CP+Y D GP + + ++ RDE RL L Sbjct: 22 LRSCVHCGFCNATCPTYQELGDELDGPRGRIYLVKQFLE-RDEASERTRL-------HLD 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC + NC +CP G+ K + I LL ++ Sbjct: 74 RCLSCRNCETTCPSGVEYHKLL-DIGRDLLAERL 106 >gi|71908926|ref|YP_286513.1| glycolate oxidase iron-sulfur subunit [Dechloromonas aromatica RCB] gi|71848547|gb|AAZ48043.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224, cysteine-rich region [Dechloromonas aromatica RCB] Length = 411 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K EL +H + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 DTKITDELRATHAGQVAEEILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L RC T +C +CP G+ + + +++ K+ Sbjct: 62 KAVTEKTR-------THLDRCLTCRSCETTCPSGVKY-SHLLDVGRAVVEEKL 106 >gi|256826376|ref|YP_003150336.1| Fe-S oxidoreductase [Kytococcus sedentarius DSM 20547] gi|256689769|gb|ACV07571.1| Fe-S oxidoreductase [Kytococcus sedentarius DSM 20547] Length = 1388 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 44/158 (27%), Gaps = 37/158 (23%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q I + + + C C C CP+ WN+++ L Sbjct: 286 MDQLEEIAEADEGDDELRMGVGSIEDFTWKGLLDFTTCTECGRCQEQCPA--WNTEKPLS 343 Query: 193 PAILLQAYR----------------WLIDSRDEF-QGERLDN------------------ 217 P +L+ R DS+ E D Sbjct: 344 PKMLVMNLRDAAYAQAPWQSATLTASDPDSQVAAGSPEDFDIRQLVGATEGDPTIPSGGA 403 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C + C + CP + AI ++ + Sbjct: 404 VIDPDVLWSCTSCGACVEQCPVDIEHVDAIVDMRRNQV 441 >gi|227540591|ref|ZP_03970640.1| possible oxidoreductase, Fe-S subunit [Sphingobacterium spiritivorum ATCC 33300] gi|227239530|gb|EEI89545.1| possible oxidoreductase, Fe-S subunit [Sphingobacterium spiritivorum ATCC 33300] Length = 265 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + Y C C C+++CP+ + + L P + ++D+RD Sbjct: 126 WKNLLDAYTCTECGRCTSACPAN--MTGKLLSPR------KIMMDTRDRLEEVGKNIDKN 177 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E LD ++ C + C + CP +NP + I ++ + Sbjct: 178 GSAVEDNKSLLDTYISREEIWACTSCNACVEQCPVNINPLEIIMGLRQYAVME 230 >gi|330960323|gb|EGH60583.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 410 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSDHARTLPRAAEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + +L L RC + NC +CP G++ + I +D Sbjct: 62 HEVTEKTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDA 104 >gi|319954617|ref|YP_004165884.1| hypothetical protein Celal_3112 [Cellulophaga algicola DSM 14237] gi|319423277|gb|ADV50386.1| hypothetical protein Celal_3112 [Cellulophaga algicola DSM 14237] Length = 436 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 25/115 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE----------- 209 ++ Y C C C++ CP+ + L P + ++D+RD Sbjct: 295 WVQLLNAYTCTECGRCTSECPANIT--GKKLSPR------KIMMDTRDRLVEVGKNIDAN 346 Query: 210 ------FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L + L+ C + C Q+CP ++P I ++ L+ + Sbjct: 347 KGIFIPDGKQLLGDYITNEELWACTSCNACVQACPVSIDPLSIIMDMRQYLVMEQ 401 >gi|27382651|ref|NP_774180.1| glycolate oxidase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] gi|27355823|dbj|BAC52805.1| glycolate oxidase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] Length = 440 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + + L CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E + +++ RC + + C +CP G+N + + ++ + R Sbjct: 62 DQTPTAEVVKHVD------RCLSCLACMTTCPSGVNYMHLVDQARVRIEQR 106 >gi|328883482|emb|CCA56721.1| Fe-S oxidoreductase [Streptomyces venezuelae ATCC 10712] Length = 753 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPAEDAVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDNL---------------------EDPFRL 224 R ++ E+L ++ DP L Sbjct: 331 RDHAHAKAPYLLAGGGKDMEGNEKATEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|91762597|ref|ZP_01264562.1| (S)-2-hydroxy-acid oxidase [Candidatus Pelagibacter ubique HTCC1002] gi|91718399|gb|EAS85049.1| (S)-2-hydroxy-acid oxidase [Candidatus Pelagibacter ubique HTCC1002] Length = 431 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ L+ ++ +CV C C+ +CP++ D GP + + ++++ Sbjct: 2 QTNFTEKQLKDSDNAATEKIFKKCVHCGFCNATCPTHQIFGDELDGPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + + +++ RC + +C +CP G+N I K + Sbjct: 62 QKKPTAKTVKHID------RCLSCYSCMTTCPAGVNYMHIIDHGKKYIEK 105 >gi|332284784|ref|YP_004416695.1| glycolate oxidase iron-sulfur subunit [Pusillimonas sp. T7-7] gi|330428737|gb|AEC20071.1| glycolate oxidase iron-sulfur subunit [Pusillimonas sp. T7-7] Length = 412 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C +CP+Y D P + + +++ + + L R Sbjct: 22 LRRCVHCGFCLATCPTYQVLGDERDSPRGRIYLIKQVLEGVEPTEK-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ A+ I L+D+K+ Sbjct: 75 CLTCRNCETTCPSGVQYG-ALVDIGRNLVDQKV 106 >gi|295697057|ref|YP_003590295.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] gi|295412659|gb|ADG07151.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] Length = 713 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 20/118 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW--------------------NSDRYLGPAILLQAY 200 +++ C C C CP+ + + G + Sbjct: 298 WKELLHFDACTKCGRCHDVCPARNSGAPLSPRDLILDLREAISGFHGMKRPGAKVGHLVA 357 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + S++ L P L+ C T C ++CP G+ I +++ L+D+ Sbjct: 358 ESDLSSQEVSAALEPGELIAPDVLWSCTTCRACVETCPVGIEHVPIIVQMRRSLIDQG 415 >gi|186477264|ref|YP_001858734.1| glycolate oxidase iron-sulfur subunit [Burkholderia phymatum STM815] gi|184193723|gb|ACC71688.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phymatum STM815] Length = 408 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC T NC +CP G+ K + +I L + K+ Sbjct: 62 APVTRSTQL-------HLDRCLTCRNCESTCPSGVQYGKLV-EIGRKLTEEKV 106 >gi|114326736|ref|YP_743893.1| fumarate reductase iron-sulfur protein [Granulibacter bethesdensis CGDNIH1] gi|114314910|gb|ABI60970.1| fumarate reductase iron-sulfur protein [Granulibacter bethesdensis CGDNIH1] Length = 654 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL----- 215 ++ C+ C C +CP++ + L P L+Q + + D + G Sbjct: 242 WNRLASFDACIQCGRCEQACPAFAA--GQPLNPKKLIQDLTFALHGGDAYTGSPYPQARP 299 Query: 216 --------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D + P L+ C T C CP + AI ++ Sbjct: 300 VAGHGGAHHPIIGADAVIHPDTLWSCTTCRACVHECPMLIEHVDAIVDMRR 350 >gi|300113503|ref|YP_003760078.1| hypothetical protein Nwat_0805 [Nitrosococcus watsonii C-113] gi|299539440|gb|ADJ27757.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosococcus watsonii C-113] Length = 414 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 6/92 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 G CV C C CP+Y D P + R L ++ L +LE Sbjct: 1 MEKGTDRCVRCGLCLPHCPTYRLTGDESESPRGRISLIRALAQNQLTPTPPLLGHLE--- 57 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC T C CP + + I ++ + Sbjct: 58 ---RCLTCRACESVCPSDVPYGRLIDTVRAQV 86 >gi|295697182|ref|YP_003590420.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] gi|295412784|gb|ADG07276.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] Length = 459 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D D CV C C +CP+Y P + R + R + L Sbjct: 34 DDPPDPDKYSVCVHCGLCLEACPTYQELGIENQSPRGRVYLIRAASEGRLPLD----EAL 89 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DP ++RC C CP G+ I + + + + Sbjct: 90 IDP--VFRCLDCRACESVCPSGVQVGTLIEQARGQVFAAR 127 >gi|156740830|ref|YP_001430959.1| hypothetical protein Rcas_0824 [Roseiflexus castenholzii DSM 13941] gi|156232158|gb|ABU56941.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 435 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 7/102 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + R+ L +C+ C C +CP+Y P + R + D R + + Sbjct: 9 QSREYRTKLDQCIHCGLCLQACPTYDVFGTEMDSPRGRIALMRAVSDGRIAE-----EQV 63 Query: 219 EDPF--RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 F + RC C +CP G+ + + ++ + Sbjct: 64 NGAFATHITRCLACRACETACPSGVQYGALLEPARELVEQHR 105 >gi|296271358|ref|YP_003653990.1| hypothetical protein Tbis_3407 [Thermobispora bispora DSM 43833] gi|296094145|gb|ADG90097.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobispora bispora DSM 43833] Length = 699 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 37/142 (26%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ +D Y C C C + CP+ WN+ + L P + Sbjct: 268 FEEADPETDVFGRGKIQDITWKGFLDFYSCTECGRCQSQCPA--WNTGKPLSPKM----- 320 Query: 201 RWLIDSRD------------EFQGERL---------------DNLEDPFRLYRCHTIMNC 233 +++ RD E + ERL D + P L+ C C Sbjct: 321 -LILEQRDHAFKVAPYLLAGEKERERLPQDVLTLVEKPLVGEDGVIHPDVLWSCTNCGAC 379 Query: 234 TQSCPKGLNPAKAIAKIKMMLL 255 + CP + I ++ + Sbjct: 380 VEQCPVDIEHIDHILDMRRYQV 401 >gi|269124515|ref|YP_003297885.1| hypothetical protein Tcur_0242 [Thermomonospora curvata DSM 43183] gi|268309473|gb|ACY95847.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermomonospora curvata DSM 43183] Length = 717 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 28/170 (16%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG- 166 I + PL M + + + + + + + P ED Sbjct: 238 HLHIFLAPLNVMFKRRPDGLGAAQPMMSNGKVLDF-EEADPDTDVFGRGKIEDFTWKGFL 296 Query: 167 -LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDS---RDEFQGER 214 + C C C + CP+ WN+ + L P +++ R +++ S R++F E+ Sbjct: 297 DMATCTECGRCQSQCPA--WNTGKPLSPKMVILELRDHAFAKAPYILASEEQREKFTDEQ 354 Query: 215 LDNLE------------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ P L+ C C + CP + I ++ Sbjct: 355 KAAMQVDKPLVGEDGVIHPDVLWSCTNCGACVEQCPVDIEHIDHILDMRR 404 >gi|309792294|ref|ZP_07686766.1| hypothetical protein OSCT_2717 [Oscillochloris trichoides DG6] gi|308225835|gb|EFO79591.1| hypothetical protein OSCT_2717 [Oscillochloris trichoides DG6] Length = 455 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 5/117 (4%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + S +DR D + CV C C +SCP+Y P + + Sbjct: 1 MSTSDDQPAIPLIPFSDKDRPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIYLMK 60 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + R + C C CP G+ + + + + Sbjct: 61 AVDEGRIGLESAVFQEQMS-----MCLNCRACEAVCPSGVQYGAILEASRAQIEQAR 112 >gi|146280828|ref|YP_001170981.1| glycolate oxidase iron-sulfur subunit [Pseudomonas stutzeri A1501] gi|145569033|gb|ABP78139.1| glycolate oxidase, iron-sulfur subunit [Pseudomonas stutzeri A1501] Length = 405 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + + + + + +L L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLMKQMFEGGEVTESTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++R++ Sbjct: 75 CLTCRNCETTCPSGVKYHNLL-DIGRDFIERQV 106 >gi|325967907|ref|YP_004244099.1| iron-sulfur binding reductase, probable [Vulcanisaeta moutnovskia 768-28] gi|323707110|gb|ADY00597.1| iron-sulfur binding reductase, probable [Vulcanisaeta moutnovskia 768-28] Length = 657 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 5/86 (5%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C +CP+Y P + + + +D L+ C T Sbjct: 277 CTDCFRCQDACPAYAAG-----RPLSPMMIITKIKHGLYNNDDKLIDGSIADDELWACTT 331 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLL 255 C +CP + I ++ L+ Sbjct: 332 CGACMNTCPVYIRHVDYIIDMRRYLV 357 >gi|70729635|ref|YP_259374.1| glycolate oxidase iron-sulfur subunit [Pseudomonas fluorescens Pf-5] gi|68343934|gb|AAY91540.1| glycolate oxidase, iron-sulfur subunit [Pseudomonas fluorescens Pf-5] Length = 405 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 Q + L CV C C+ +CP+Y D GP + + +++ Sbjct: 10 RQLPRAAEAERILRSCVHCGFCNATCPTYQLQGDELDGPRGRIYLIKQVLEGAP------ 63 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC + NC +CP G++ + I +D + Sbjct: 64 -ATAHAQQHLDRCLSCRNCESTCPSGVDYHNLL-DIGRAAVDAAL 106 >gi|257093618|ref|YP_003167259.1| hypothetical protein CAP2UW1_2034 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046142|gb|ACV35330.1| protein of unknown function DUF224 cysteine-rich region domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 415 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 8/99 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ L CV C C+ +CP++ D GP + + +++ + + +L Sbjct: 16 READAILRSCVHCGFCNATCPTFQLLGDELDGPRGRIYLIKQMLEGQPVTEKTQL----- 70 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC + +C +CP G+ + + +I +++ ++ Sbjct: 71 --HLDRCLSCRSCETTCPSGVRYQRLL-EIGREVIEERV 106 >gi|167574949|ref|ZP_02367823.1| glycolate oxidase iron-sulfur subunit [Burkholderia oklahomensis C6786] Length = 411 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + +++ G RL L R Sbjct: 22 LRACVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQVLEGEPVTDGTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + NC +CP G+ A+ I ++R+ Sbjct: 75 CLSCRNCETTCPSGVRY-HALLDIGRAEVERR 105 >gi|325284568|ref|YP_004264031.1| hypothetical protein Deipr_2040 [Deinococcus proteolyticus MRP] gi|324316057|gb|ADY27171.1| protein of unknown function DUF224 cysteine-rich region domain protein [Deinococcus proteolyticus MRP] Length = 458 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y D P + + +++ L+ + Sbjct: 50 MAHAVEACVHCGFCLPACPTYALLGDEMDSPRGRIVLMKEVLEG-------DLELADAAP 102 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L RC C +CP G+ + I + Sbjct: 103 HLDRCLGCQGCVTACPSGVPYGELITSFR 131 >gi|329939298|ref|ZP_08288634.1| iron-sulfur binding reductase [Streptomyces griseoaurantiacus M045] gi|329301527|gb|EGG45421.1| iron-sulfur binding reductase [Streptomyces griseoaurantiacus M045] Length = 762 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKSMEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L+++ DP L+ C T C + CP + I Sbjct: 356 SEEQLEDVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|308272832|emb|CBX29436.1| hypothetical protein N47_J04170 [uncultured Desulfobacterium sp.] Length = 524 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 4/142 (2%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYECVMC 173 +P+ ++ ++ FY + + D L C C Sbjct: 237 IPYSRLLHAFTSSLNIFYRNLETKGALPVLDISASDTYGVGRINDFTFKHLLELDACTRC 296 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP+ S++ L P L+Q + +++ + ++ C T +NC Sbjct: 297 GRCQENCPA--LISEKNLNPKSLVQNLKKHMETPSASNNALIGGSVSNDEIWECTTCLNC 354 Query: 234 TQSCPKGLNPAKAIAKIKMMLL 255 + CP + P I +++ + Sbjct: 355 IEHCPVFIEPMLKIVEMRRNAV 376 >gi|94984730|ref|YP_604094.1| protein of unknown function DUF224, cysteine-rich region [Deinococcus geothermalis DSM 11300] gi|94555011|gb|ABF44925.1| Glycolate oxidase, Fe-S subunit [Deinococcus geothermalis DSM 11300] Length = 425 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y D P + + +++ L + Sbjct: 17 MAHAVDACVHCGFCLPACPTYALLGDEMDSPRGRIVLMKEVLEGT-------LPLADAAP 69 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L RC C +CP G+ + I + Sbjct: 70 HLDRCLGCQACVTACPSGVPYGELITSFR 98 >gi|300024085|ref|YP_003756696.1| hypothetical protein Hden_2579 [Hyphomicrobium denitrificans ATCC 51888] gi|299525906|gb|ADJ24375.1| protein of unknown function DUF224 cysteine-rich region domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 454 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 18/125 (14%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +K L++ E + L CV C C+ +CP+Y D P + A + +++ Sbjct: 2 HTSFSKAQLENPEIARAERILRRCVHCGLCTATCPTYVVLGDERDSPRGRIYAIKDMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK----------IKMML 254 + + E +++ RC T ++C +CP G++ IA+ +K L Sbjct: 62 GIDAKPEVSKHID------RCLTCLSCMTTCPSGVDYMHLVEIARGHIEKTGNRSLKDRL 115 Query: 255 LDRKI 259 + R + Sbjct: 116 IRRAL 120 >gi|126732244|ref|ZP_01748045.1| glycolate oxidase, iron-sulfur subunit [Sagittula stellata E-37] gi|126707326|gb|EBA06391.1| glycolate oxidase, iron-sulfur subunit [Sagittula stellata E-37] Length = 452 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L CV C C+ +CP+Y D P + + D + ER+ + + Sbjct: 16 ARANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK------DMLENERVPDADT 69 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + RC + + C +CP G++ + + + +R Sbjct: 70 VKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEER 106 >gi|30248682|ref|NP_840752.1| glycolate oxidase iron-sulfur subunit [Nitrosomonas europaea ATCC 19718] gi|30180277|emb|CAD84584.1| glcF; glycolate oxidase (iron-sulfur subunit) protein [Nitrosomonas europaea ATCC 19718] Length = 419 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E ++ L CV C C +CP+Y + P + + +++ ++ + + Sbjct: 10 KDTPEGQEADAILRSCVHCGFCLATCPTYQLLGNELDSPRGRIYLIKQMLEGQEVTEKTQ 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T C +CP G+ + I +++++I Sbjct: 70 L-------HLDRCLTCRACETTCPSGVQYGHLL-DIGRGMVEQQI 106 >gi|104782243|ref|YP_608741.1| glycolate oxidase iron-sulfur subunit [Pseudomonas entomophila L48] gi|95111230|emb|CAK15950.1| Glycolate oxidase subunit, FeS protein [Pseudomonas entomophila L48] Length = 410 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAPVTASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + NC +CP G+ + I ++D+++ Sbjct: 75 CLSCRNCETTCPSGVKYHDLL-DIGRAVVDQQV 106 >gi|78223459|ref|YP_385206.1| hypothetical protein Gmet_2255 [Geobacter metallireducens GS-15] gi|78194714|gb|ABB32481.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 655 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 14/156 (8%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP+ + L + F+ + + K + + D L C C Sbjct: 217 LPNSKHLHILTAIPNCFFRRLEQPNTQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTEC 276 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---LEDPFR------- 223 C +CP+ + L P ++ + + L L Sbjct: 277 GRCQNACPAGIT--GKPLNPRGIIHEIKVNLLGNGHHLKNGLKPELPLIGEGGGSCPEGA 334 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C T C ++CP + I +++ L++ + Sbjct: 335 IWSCTTCGACMEACPVFIEHVPKIVQMRRHLVEEDV 370 >gi|296123732|ref|YP_003631510.1| hypothetical protein Plim_3498 [Planctomyces limnophilus DSM 3776] gi|296016072|gb|ADG69311.1| protein of unknown function DUF224 cysteine-rich region domain protein [Planctomyces limnophilus DSM 3776] Length = 463 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 6/89 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C ++CP+Y D P + R + + R E +LE Sbjct: 32 PQKRFLDCVHCGLCLSACPTYLETGDENDSPRGRIYLMRAVAEGRTGLTNEIASHLE--- 88 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ + I + Sbjct: 89 ---ACLDCRACETACPSGVQYGRLIEPFR 114 >gi|120556209|ref|YP_960560.1| glycolate oxidase iron-sulfur subunit [Marinobacter aquaeolei VT8] gi|120326058|gb|ABM20373.1| protein of unknown function DUF224, cysteine-rich region domain protein [Marinobacter aquaeolei VT8] Length = 402 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + E ++ + L CV C C+ +CP+Y +D GP + + ++ Sbjct: 2 QTNLVQHFANTPEGQEAEEILRACVHCGFCTATCPTYQELNDERDGPRGRIYLMKMFLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L RC T +C +CP G+ + + I L+D+++ Sbjct: 62 GEVTEKTR-------EHLDRCLTCRSCETTCPSGVKYGRLV-DISRGLIDKEL 106 >gi|254384542|ref|ZP_04999882.1| iron-sulphur-binding reductase [Streptomyces sp. Mg1] gi|194343427|gb|EDX24393.1| iron-sulphur-binding reductase [Streptomyces sp. Mg1] Length = 925 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 38/131 (29%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 + I C C C + CP+ WN+ + L P +L+ + R Sbjct: 293 WKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVMSLRDHAHAKAPYLLAGGGKDME 350 Query: 206 SRDEFQGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPA 244 ++ E+L N+ DP L+ C T C + CP + Sbjct: 351 GNEKATAEQLANVPAAALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHI 410 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 411 DHIVDMRRYQV 421 >gi|239980669|ref|ZP_04703193.1| putative iron-sulphur-binding reductase [Streptomyces albus J1074] gi|291452529|ref|ZP_06591919.1| Iron-sulfur-binding reductase [Streptomyces albus J1074] gi|291355478|gb|EFE82380.1| Iron-sulfur-binding reductase [Streptomyces albus J1074] Length = 761 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 304 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 361 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 362 TAEQLKDVPASALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHIDHIVD 421 Query: 250 IKMMLL 255 ++ + Sbjct: 422 MRRYQV 427 >gi|330940763|gb|EGH43759.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 186 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + R+ L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRV-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + NC +CP G++ + I ++ Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAVEA 104 >gi|326335010|ref|ZP_08201210.1| Fe-S oxidoreductase N-terminal domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692815|gb|EGD34754.1| Fe-S oxidoreductase N-terminal domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 434 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 23/135 (17%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 E + + H R ++ Y C C C+ CP+ + L P ++ Sbjct: 273 ETSQEEEATPTFGASDVFHLSRVQLLSAYACTECGRCTDECPANQT--GKLLSPRKIVMD 330 Query: 200 YR----------------WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R ++ D + L + P L+ C T C ++CP ++P Sbjct: 331 TRRRVQQVGENIETNKGTFVPDG-----KQLLGDYITPEELWACTTCAACVEACPMEISP 385 Query: 244 AKAIAKIKMMLLDRK 258 + ++ ++ + Sbjct: 386 LSILVDLRRYIVMEQ 400 >gi|114331859|ref|YP_748081.1| glycolate oxidase iron-sulfur subunit [Nitrosomonas eutropha C91] gi|114308873|gb|ABI60116.1| protein of unknown function DUF224, cysteine-rich region domain protein [Nitrosomonas eutropha C91] Length = 420 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E ++ L CV C C +CP+Y + P + + +++ ++ + + Sbjct: 10 KDTPEGKEADAILRSCVHCGFCLATCPTYQLLGNELDSPRGRIYLIKQMLEGQEVTEKTQ 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T C +CP G+ + + I +++++I Sbjct: 70 L-------HLDRCLTCRACETTCPSGVQYGRLL-DIGRGMVEQQI 106 >gi|295675575|ref|YP_003604099.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1002] gi|295435418|gb|ADG14588.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1002] Length = 408 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ L RC T NC +CP G+ + + +I L + K+ Sbjct: 62 APVTRSTQV-------HLDRCLTCRNCETTCPSGVQYGRLV-EIGRKLTEEKV 106 >gi|126669014|ref|ZP_01739951.1| glycolate oxidase iron-sulfur subunit [Marinobacter sp. ELB17] gi|126626530|gb|EAZ97190.1| glycolate oxidase iron-sulfur subunit [Marinobacter sp. ELB17] Length = 402 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C+ +CP+Y +D GP + + +++ + R L RC T Sbjct: 25 CVHCGFCTATCPTYQELNDERDGPRGRIYLIKEMLEGAEVTSKTR-------DHLDRCLT 77 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G+ + + I +++ K+ Sbjct: 78 CRACETTCPSGVQYGRLV-DIGRGVIEEKL 106 >gi|297193130|ref|ZP_06910528.1| Iron-sulfur-binding reductase [Streptomyces pristinaespiralis ATCC 25486] gi|197721303|gb|EDY65211.1| Iron-sulfur-binding reductase [Streptomyces pristinaespiralis ATCC 25486] Length = 761 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + I C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDN---------------------LEDPFRL 224 R ++ E+L + + DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEEKASAEQLKDVPASALAEAERPLIGTLEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|290958691|ref|YP_003489873.1| iron-sulfur-binding reductase [Streptomyces scabiei 87.22] gi|260648217|emb|CBG71325.1| putative iron-sulphur-binding reductase [Streptomyces scabiei 87.22] Length = 765 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 38/131 (29%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 + I C C C + CP+ WN+ + L P +L+ + R Sbjct: 293 WKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKSME 350 Query: 206 SRDEFQGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPA 244 ++ E+L ++ DP L+ C T C + CP + Sbjct: 351 GEEKASEEQLKDVPAAALAEAERPLIGTVEENGVIDPDVLWSCTTCGACVEQCPVDIEHV 410 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 411 DHIVDMRRYQV 421 >gi|77458444|ref|YP_347949.1| glycolate oxidase iron-sulfur subunit [Pseudomonas fluorescens Pf0-1] gi|77382447|gb|ABA73960.1| glycolate oxidase iron-sulfur subunit [Pseudomonas fluorescens Pf0-1] Length = 410 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + L R Sbjct: 22 LRTCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVTAK-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + NC +CP G++ + I ++D + Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAVVDAAV 106 >gi|333026010|ref|ZP_08454074.1| putative iron-sulfur-binding reductase [Streptomyces sp. Tu6071] gi|332745862|gb|EGJ76303.1| putative iron-sulfur-binding reductase [Streptomyces sp. Tu6071] Length = 758 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + + C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDVFGVSQVEQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDN---------------------LEDPFRL 224 R + E+L + + DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEERASEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|325277555|ref|ZP_08143148.1| glycolate oxidase iron-sulfur subunit [Pseudomonas sp. TJI-51] gi|324097310|gb|EGB95563.1| glycolate oxidase iron-sulfur subunit [Pseudomonas sp. TJI-51] Length = 411 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVSASTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + NC +CP G+ + I + ++++ Sbjct: 75 CLSCRNCESTCPSGVRYHDLL-DIGRAVAEQQV 106 >gi|318079092|ref|ZP_07986424.1| iron-sulphur-binding reductase [Streptomyces sp. SA3_actF] Length = 756 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + + C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDVFGVSQVEQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDN---------------------LEDPFRL 224 R + E+L + + DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEERASEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|318057308|ref|ZP_07976031.1| iron-sulphur-binding reductase [Streptomyces sp. SA3_actG] Length = 758 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + + C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDVFGVSQVEQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDN---------------------LEDPFRL 224 R + E+L + + DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEERASEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|302520265|ref|ZP_07272607.1| iron-sulfur-binding reductase [Streptomyces sp. SPB78] gi|302429160|gb|EFL00976.1| iron-sulfur-binding reductase [Streptomyces sp. SPB78] Length = 758 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 38/151 (25%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W + + C C C + CP+ WN+ + L P +L+ + Sbjct: 273 DWEDPGEDDVFGVSQVEQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 330 Query: 201 RWLID---------------SRDEFQGERLDN---------------------LEDPFRL 224 R + E+L + + DP L Sbjct: 331 RDHAHAKAPYLLAGGGKTMEGEERASEEQLKDVPAAALAEAERPLIGTAEENGVIDPDVL 390 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 391 WSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 421 >gi|302554688|ref|ZP_07307030.1| iron-sulfur-binding reductase [Streptomyces viridochromogenes DSM 40736] gi|302472306|gb|EFL35399.1| iron-sulfur-binding reductase [Streptomyces viridochromogenes DSM 40736] Length = 763 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 356 SEEQLKDVPAAALAEAERPLVGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|302552954|ref|ZP_07305296.1| iron-sulfur-binding reductase [Streptomyces viridochromogenes DSM 40736] gi|302470572|gb|EFL33665.1| iron-sulfur-binding reductase [Streptomyces viridochromogenes DSM 40736] Length = 770 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 356 SEEQLKDVPAAALAEAERPLVGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|239929973|ref|ZP_04686926.1| iron-sulphur-binding reductase [Streptomyces ghanaensis ATCC 14672] gi|291438308|ref|ZP_06577698.1| Iron-sulfur-binding reductase [Streptomyces ghanaensis ATCC 14672] gi|291341203|gb|EFE68159.1| Iron-sulfur-binding reductase [Streptomyces ghanaensis ATCC 14672] Length = 760 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 356 SEEQLKDVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|29831025|ref|NP_825659.1| iron-sulphur-binding reductase [Streptomyces avermitilis MA-4680] gi|29608139|dbj|BAC72194.1| putative iron-sulfur binding reductase [Streptomyces avermitilis MA-4680] Length = 755 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 356 SEEQLKDVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|317123472|ref|YP_004097584.1| hypothetical protein Intca_0302 [Intrasporangium calvum DSM 43043] gi|315587560|gb|ADU46857.1| protein of unknown function DUF224 cysteine-rich region domain protein [Intrasporangium calvum DSM 43043] Length = 787 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 78/294 (26%), Gaps = 83/294 (28%) Query: 41 GNPCMDTYYVDLDNCGPMVLDGLLYIKN---------KIDPTLTLRRSC--REGICGSCG 89 G+ YYV+L G + L + L + E G Sbjct: 152 GSTWWQAYYVELTILGVTLCILALRVLEYALAKVEGLDTASALNFPMTAWLGESFTGLSV 211 Query: 90 MNIDG-TNTLACVKDMKDIKGAIAVYPLPHMSVI-KDLVVDMSHFYSQHRSIEPWLKTVS 147 ++G +A +K + + I + P M V + + F+ +H L + Sbjct: 212 AALEGAIVVIATLKILISMAWMITIALNPTMGVAWHRFLAFFNIFWKRHADGRTSLGELQ 271 Query: 148 PKPAKELLQSHED-------------------RQKIDGLYECVMCACCSTSCPSYWWNSD 188 P E+ + + C C C + CP+ WN+D Sbjct: 272 PIRVNGEPLDFENVDDLDEDAALGVGKIEDFTWKGLLDFTTCTECGRCQSQCPA--WNTD 329 Query: 189 RYLGPAILLQAYRWLID---SRDEFQGERLD----------------------------- 216 + L P +L+ + R + E Sbjct: 330 KPLSPKLLVMSLRDHAHAKAPWLQASEEVRAKGIDAGSFSERTKAAVAVDQLVGETGYDI 389 Query: 217 -----------------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + D L+ C T C + CP + AI ++ Sbjct: 390 TDPLGAYQPYGAPDGGGAVIDQDVLWSCTTCGACVEQCPVDIEHVDAIVDMRRY 443 >gi|311105108|ref|YP_003977961.1| glycolate oxidase iron-sulfur subunit [Achromobacter xylosoxidans A8] gi|310759797|gb|ADP15246.1| glycolate oxidase iron-sulfur subunit [Achromobacter xylosoxidans A8] Length = 414 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ + Q L R Sbjct: 22 LRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQVLEGAEPTQS-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I +++ ++ Sbjct: 75 CLTCRNCETTCPSGVQYG-HLVDIGRKIVEERV 106 >gi|222084980|ref|YP_002543509.1| glycolate oxidase subunit F protein [Agrobacterium radiobacter K84] gi|221722428|gb|ACM25584.1| glycolate oxidase subunit F protein [Agrobacterium radiobacter K84] Length = 439 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L + L +CV C C+ +CP+Y + P + + ++++ E Sbjct: 9 QLADPHVAESEAILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRAADAE 68 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + + C +CP G++ I + + + Sbjct: 69 VVTHID------RCLSCLACVTTCPSGVDYMHLIDHARAHIEE 105 >gi|15828353|ref|NP_302616.1| iron-sulphur-binding reductase [Mycobacterium leprae TN] gi|221230830|ref|YP_002504246.1| putative iron-sulphur-binding reductase [Mycobacterium leprae Br4923] gi|13094046|emb|CAC32018.1| probable iron-sulphur-binding reductase [Mycobacterium leprae] gi|219933937|emb|CAR72600.1| probable iron-sulphur-binding reductase [Mycobacterium leprae Br4923] Length = 880 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 54/203 (26%), Gaps = 62/203 (30%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + EP + A ED Sbjct: 232 HSKHLHIFLAPINVTFKRLPDGLGPLMPMESDGEPINFEDPSEDAVFGRGKIEDFTWKAM 291 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-----------EFQGE 213 C C C + CP+ WN+ + L P ++ ++D RD E E Sbjct: 292 LDFATCTECGRCQSQCPA--WNTGKPLSPKLV------IMDLRDHWMAKAPYILGEKTAE 343 Query: 214 RLDNLE-----------------------------------------DPFRLYRCHTIMN 232 +L+ L DP L+ C T Sbjct: 344 KLEGLNLETTKDKSRHVPESGFGRVPGHGPEQATRPLVGTAEQGGVIDPDVLWSCVTCGA 403 Query: 233 CTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 404 CVEQCPVDIEHIDHIIDMRRYQV 426 >gi|240173091|ref|ZP_04751749.1| putative iron-sulfur-binding reductase [Mycobacterium kansasii ATCC 12478] Length = 974 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 53/196 (27%), Gaps = 49/196 (25%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P V K L + +P P A+ ED Sbjct: 230 HSKHLHIFLAPINVVFKRLPDGLGPLLPIEADGKPIDFENPPDDAEFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQGERLD 216 C C C + CP+ WN+ + L P +++ R +L+ +D Sbjct: 290 LDFATCTECGRCQSQCPA--WNTGKPLSPKLVIMDLRDHWMAKAPYLLGEKDAATEGGYV 347 Query: 217 N-------------------------------------LEDPFRLYRCHTIMNCTQSCPK 239 + DP L+ C T C + CP Sbjct: 348 ESGRGEHHHVPESGFGRVPGSGPEQANRPLVGTAEQGGVIDPDVLWSCVTCGACVEQCPV 407 Query: 240 GLNPAKAIAKIKMMLL 255 + I ++ + Sbjct: 408 DIEHVDHIVDMRRYQV 423 >gi|313206479|ref|YP_004045656.1| transmembrane (4fe-4S) cluster-binding oxidoreductase [Riemerella anatipestifer DSM 15868] gi|312445795|gb|ADQ82150.1| transmembrane (4Fe-4S) cluster-binding oxidoreductase [Riemerella anatipestifer DSM 15868] gi|315023580|gb|EFT36584.1| transmembrane [4Fe-4S] cluster-binding oxidoredu ctase [Riemerella anatipestifer RA-YM] gi|325336075|gb|ADZ12349.1| hypothetical protein RIA_1246 [Riemerella anatipestifer RA-GD] Length = 445 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 59/153 (38%), Gaps = 24/153 (15%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V K++ + M + + + + A+++ ++ ++ Y C C C+ C Sbjct: 267 VTKEIKLMMDPNADPYAASPDGAEPPAKFGAEDVFDLNQ--VQLLNAYTCTECGRCTAVC 324 Query: 181 PSYWWNSDRYLGPAILLQAYR---------------WLIDSRDEFQGERLDNLEDPFRLY 225 P+ + L P ++ + R ++ D + LD+ L+ Sbjct: 325 PANLT--GKKLSPRKIMMSTRDRLEEVGQNINKNGKFVDDG-----KKLLDDYITREELW 377 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + C ++CP ++P I +++ L+ + Sbjct: 378 ACTSCNACVEACPVLIDPLSIIFEMRRFLVMEQ 410 >gi|296161768|ref|ZP_06844570.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] gi|295887932|gb|EFG67748.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] Length = 408 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFMRNTPDGDEADGILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ L RC T NC +CP G+ + + +I + + K+ Sbjct: 62 APVTRSTQV-------HLDRCLTCRNCETTCPSGVQYGRLV-EIGRKITEEKV 106 >gi|85705922|ref|ZP_01037018.1| glycolate oxidase, iron-sulfur subunit [Roseovarius sp. 217] gi|85669510|gb|EAQ24375.1| glycolate oxidase, iron-sulfur subunit [Roseovarius sp. 217] Length = 440 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L++ + + + L CV C C+ +CP+Y D P + + Sbjct: 2 KTEFTAEQLENPKIARANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + +R+ + + + RC + + C +CP G++ + + + + +R Sbjct: 57 -DMLENDRVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDQAREYIEER 106 >gi|92118668|ref|YP_578397.1| protein of unknown function DUF224, cysteine-rich region [Nitrobacter hamburgensis X14] gi|91801562|gb|ABE63937.1| protein of unknown function DUF224, cysteine-rich region [Nitrobacter hamburgensis X14] Length = 438 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + L +CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTEFTPAQLADPDIVEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E + +++ RC + + C +CP G+N + + ++ + Sbjct: 62 NEPPTAEVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARVRIEKE 106 >gi|317402796|gb|EFV83340.1| glycolate oxidase iron-sulfur subunit [Achromobacter xylosoxidans C54] Length = 409 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ + Q L R Sbjct: 22 LRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQVLEGAEPTQS-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I +++ ++ Sbjct: 75 CLTCRNCETTCPSGVEYG-HLVDIGRQIVEERV 106 >gi|294678390|ref|YP_003579005.1| glycolate dehydrogenase, iron-sulfur subunit [Rhodobacter capsulatus SB 1003] gi|294477210|gb|ADE86598.1| glycolate dehydrogenase, iron-sulfur subunit [Rhodobacter capsulatus SB 1003] Length = 427 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 20/124 (16%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID- 205 E L + L CV C C+ +CPSY D P + + +++ Sbjct: 2 QTNFTPEQLADPALARANQILRSCVHCGFCTATCPSYQVLGDELDSPRGRIYLIKEMLET 61 Query: 206 --SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK--------MMLL 255 D +D RC + C +CP G++ I + + LL Sbjct: 62 GRPADARTARHID---------RCLGCLACMTTCPSGVDYMHLIDQARAHVDRTFKRPLL 112 Query: 256 DRKI 259 DR + Sbjct: 113 DRAL 116 >gi|91781865|ref|YP_557071.1| glycolate oxidase iron-sulfur subunit [Burkholderia xenovorans LB400] gi|91685819|gb|ABE29019.1| Putative glycolate oxidase iron-sulfur subunit [Burkholderia xenovorans LB400] Length = 408 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFMRNTPDGDEADGILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ L RC T NC +CP G+ + + +I + + K+ Sbjct: 62 APVTRSTQV-------HLDRCLTCRNCETTCPSGVQYGRLV-EIGRKITEEKV 106 >gi|197118469|ref|YP_002138896.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197087829|gb|ACH39100.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 663 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 20/159 (12%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP+ + L + F + + + + D L C C Sbjct: 215 LPYSKHMHILTAIPNVFLRNMGKSNTQPREEFCEGNSFGAATVDQLTWKDLLDSFSCTEC 274 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSR------DEFQGERLDNLEDPFR-- 223 C SCP+ + + L P ++ A + L + + Q ER +L + Sbjct: 275 GRCQDSCPA--ATTGKTLNPREVIHAMKENLLQNGTVLEKLAGDAQAERAVSLIGEGKKG 332 Query: 224 ------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ C + C ++CP + I K++ L+ Sbjct: 333 ATPESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQ 371 >gi|77164454|ref|YP_342979.1| hypothetical protein Noc_0937 [Nitrosococcus oceani ATCC 19707] gi|254433111|ref|ZP_05046619.1| Cysteine-rich domain protein [Nitrosococcus oceani AFC27] gi|76882768|gb|ABA57449.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207089444|gb|EDZ66715.1| Cysteine-rich domain protein [Nitrosococcus oceani AFC27] Length = 432 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G CV C C CP+Y D P + R L ++ L +LE Sbjct: 18 AFLEKGTDSCVRCGLCLPHCPTYLLTGDESESPRGRISLIRALAQNQLAPTPPLLGHLE- 76 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC T C CP + + I ++ + Sbjct: 77 -----RCLTCRACESVCPSDVPYGRLIDTVRAQV 105 >gi|262277871|ref|ZP_06055664.1| glycolate oxidase iron-sulfur subunit [alpha proteobacterium HIMB114] gi|262224974|gb|EEY75433.1| glycolate oxidase iron-sulfur subunit [alpha proteobacterium HIMB114] Length = 434 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K+ L E + +CV C C+ +CP+Y D GP + + ++++ Sbjct: 2 QTNFKKDQLLDPEIQNSEKIFRKCVHCGMCNATCPTYQVLGDELDGPRGRIYMIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + C +CP G++ I + + Sbjct: 62 NKPANEKIVKHID------RCLSCYACVTTCPSGVDYLHLIDHGRNHI 103 >gi|167947212|ref|ZP_02534286.1| glycolate oxidase iron-sulfur subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 254 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L + E ++ L CV C C+ +CP+Y D P + + L++ + Sbjct: 9 FLATPEGQEAEQILRACVHCGFCTATCPTYQLLGDELDSPRGRIYLIKQLLEGEPVSECT 68 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T C +CP G+ + + +I + ++++ Sbjct: 69 LL-------HLDRCLTCRACETTCPSGVRYGRLL-EIGREITEKRV 106 >gi|313902601|ref|ZP_07836001.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467167|gb|EFR62681.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter subterraneus DSM 13965] Length = 711 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 55/196 (28%), Gaps = 41/196 (20%) Query: 95 TNTLACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 A + + + LP V L + S+ ++ +P Sbjct: 216 RAVHAGTWLLHMLTWHAWLAALPYSKAFHLVTGPLNIFFSNLDAKGEP-KPMDLEDETAS 274 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 +++ L C C C +CP++ + L P R ++D RD Sbjct: 275 LGARTALDLTWKQLLDLDACTECGRCEAACPAFAE--GKPLSPK------RVILDLRDHV 326 Query: 211 QGERLDNL----------------------------EDPFRLYRCHTIMNCTQSCPKGLN 242 + R D L L+ C T C Q+CP + Sbjct: 327 RAYRDDLLRAKAAQLAGDQETYDSIVEHLPILAGGVIKEETLWACTTCRACEQACPVFIE 386 Query: 243 PAKAIAKIKMMLLDRK 258 I ++ L K Sbjct: 387 HVPTILDMRRYLAMEK 402 >gi|149203042|ref|ZP_01880013.1| glycolate oxidase, iron-sulfur subunit [Roseovarius sp. TM1035] gi|149143588|gb|EDM31624.1| glycolate oxidase, iron-sulfur subunit [Roseovarius sp. TM1035] Length = 440 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L++ + + + L CV C C+ +CP+Y D P + + Sbjct: 2 KTEFTAEQLENPKIARANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + +R+ + + + RC + + C +CP G++ + + + + +R Sbjct: 57 -DMLENDRVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDQAREYIEER 106 >gi|86748952|ref|YP_485448.1| hypothetical protein RPB_1829 [Rhodopseudomonas palustris HaA2] gi|86571980|gb|ABD06537.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 437 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + + L CV C C+ +CP+Y D P + + +++S Sbjct: 2 KTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + + C +CP G+N + + + + Sbjct: 62 NKPPTADVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARARIEK 105 >gi|75676763|ref|YP_319184.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gi|74421633|gb|ABA05832.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 437 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 6/109 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + L + + L +CV C C+ +CP+Y D P + + +++ Sbjct: 3 TEFTPAQLSDPDIAEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLEHD 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + E + +++ RC + + C +CP G+N + + ++ + Sbjct: 63 EPPTAEVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARVRIEK 105 >gi|256380934|ref|YP_003104594.1| hypothetical protein Amir_6953 [Actinosynnema mirum DSM 43827] gi|255925237|gb|ACU40748.1| protein of unknown function DUF224 cysteine-rich region domain protein [Actinosynnema mirum DSM 43827] Length = 758 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 48/158 (30%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P + ED C C C + CP+ WN+ + L P +++ R Sbjct: 271 EEADPDTDVFGVGKVEDFTWKGWLDFSTCTECGRCQSQCPA--WNTGKPLSPKLMITQLR 328 Query: 202 --------WLIDS--RDEFQGE-------------RLDNLE------------------- 219 +L+ RD E RL++++ Sbjct: 329 DHAYAKAPYLLAGGRRDMAGDEVGLVEDKYEDYKKRLESIDVLAMAEAERPLVGEAGELG 388 Query: 220 --DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C T C + CP + I ++ + Sbjct: 389 VIDPEVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 426 >gi|298241874|ref|ZP_06965681.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ktedonobacter racemifer DSM 44963] gi|297554928|gb|EFH88792.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ktedonobacter racemifer DSM 44963] Length = 523 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D D + +C+ C C +CP+Y P + + + + R + + ++++ Sbjct: 26 DTHTYDLMRQCIHCGFCLPTCPTYAVLGVEMDSPRGRIYQMQAVAEGRLDISDDFIEHMN 85 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ K I + + Sbjct: 86 ------CCVGCRACETACPSGVQFGKLIEAAREQI 114 >gi|289808376|ref|ZP_06539005.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 71 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 41/68 (60%) Query: 36 NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGT 95 NPD P M Y ++ + M+L L + DP+L+ RRSCREG+CGS G+N++G Sbjct: 1 NPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGK 60 Query: 96 NTLACVKD 103 N LAC+ Sbjct: 61 NGLACITP 68 >gi|209516921|ref|ZP_03265770.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] gi|209502590|gb|EEA02597.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] Length = 421 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y + GP + + +++ Q +L Sbjct: 19 EQILRSCVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQMLEGEPVTQKTQL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T NC +CP G+ A+ I L+R++ Sbjct: 72 LDRCLTCRNCETTCPSGVTY-HALLDIGRAELERRV 106 >gi|53725751|ref|YP_103965.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei ATCC 23344] gi|67643505|ref|ZP_00442250.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|121599027|ref|YP_991680.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei SAVP1] gi|124384048|ref|YP_001027175.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei NCTC 10229] gi|126451018|ref|YP_001082125.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei NCTC 10247] gi|166998488|ref|ZP_02264346.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei PRL-20] gi|254178836|ref|ZP_04885490.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei ATCC 10399] gi|254202681|ref|ZP_04909044.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei FMH] gi|254208021|ref|ZP_04914371.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei JHU] gi|254355839|ref|ZP_04972117.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei 2002721280] gi|52429174|gb|AAU49767.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei ATCC 23344] gi|121227837|gb|ABM50355.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei SAVP1] gi|124292068|gb|ABN01337.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei NCTC 10229] gi|126243888|gb|ABO06981.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei NCTC 10247] gi|147746928|gb|EDK54005.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei FMH] gi|147751915|gb|EDK58982.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei JHU] gi|148024814|gb|EDK82992.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei 2002721280] gi|160694750|gb|EDP84758.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei ATCC 10399] gi|238524865|gb|EEP88295.1| glycolate oxidase iron-sulfur subunit [Burkholderia mallei GB8 horse 4] gi|243065177|gb|EES47363.1| glycolate oxidase, iron-sulfur subunit [Burkholderia mallei PRL-20] Length = 408 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDSDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|292492691|ref|YP_003528130.1| hypothetical protein Nhal_2667 [Nitrosococcus halophilus Nc4] gi|291581286|gb|ADE15743.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosococcus halophilus Nc4] Length = 405 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + R+ L CV C C+ +CP+Y D P + + ++ Sbjct: 2 QTHLADFIKNTPQGREADAILRSCVHCGFCTATCPTYQLLGDELDSPRGRIYLIKQALEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T C +CP G+ + + I +++ K+ Sbjct: 62 QAVSRK-------TQQHLDRCLTCRACETTCPSGVRYGRLV-DIGREVVETKV 106 >gi|221632181|ref|YP_002521402.1| heterodisulfide reductase [Thermomicrobium roseum DSM 5159] gi|221156386|gb|ACM05513.1| heterodisulfide reductase [Thermomicrobium roseum DSM 5159] Length = 678 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE------R 214 +I Y C+MC C CP++ R L PA L R+ ++ + Sbjct: 275 WFQILDAYACIMCNRCQDVCPAHGT--GRALSPAALEINKRYYLNRNLRAFADGTSSPPL 332 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ ++ C T C + CP G P + I+ L+++ Sbjct: 333 LEIATSKEAVWACTTCAACVRICPVGNRPMLDLIDIRRALVNQG 376 >gi|21674955|ref|NP_663020.1| iron-sulfur cluster-binding protein [Chlorobium tepidum TLS] gi|21648186|gb|AAM73362.1| iron-sulfur cluster-binding protein [Chlorobium tepidum TLS] Length = 662 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 9/147 (6%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLY 168 V +P + + F+ H + E + + + Sbjct: 231 VAIIPWTKLRHIATTSGNSFFEPHEPKGTLAPLDLEDESVERFGASVVGDLSWKDLFDAD 290 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C +C C CP+Y P ++ + + L + L+ C Sbjct: 291 ACTLCGRCQQRCPAYLTGK-----PLSPMKVINDIGAVAGTENDKSLIDTVSRDALWSCT 345 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C ++CP + I +++ L+ Sbjct: 346 TCGACEETCPASIEHVGKIIEMRRSLV 372 >gi|256395104|ref|YP_003116668.1| hypothetical protein Caci_5969 [Catenulispora acidiphila DSM 44928] gi|256361330|gb|ACU74827.1| protein of unknown function DUF224 cysteine-rich region domain protein [Catenulispora acidiphila DSM 44928] Length = 445 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 10/95 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +CV C C +CP+Y D P + R +++ + E + C Sbjct: 10 AKCVHCGFCLPACPTYALTGDENDSPRGRIHLMRQVLEGKAELDDAV------AGHVDSC 63 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK----MMLLDRK 258 ++C +CP G+ + I + + +R+ Sbjct: 64 LGCLSCVSACPSGVEYDRIIEEFRPQVEEAYAERR 98 >gi|149279545|ref|ZP_01885674.1| possible oxidoreductase, Fe-S subunit [Pedobacter sp. BAL39] gi|149229581|gb|EDM34971.1| possible oxidoreductase, Fe-S subunit [Pedobacter sp. BAL39] Length = 431 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + Y C C C++ CP+ + L P + ++D+RD Sbjct: 291 WVNLMNAYTCTECGRCTSVCPANIT--GKLLSPR------KIMMDTRDRLEEVGKNIDKT 342 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + +D ++ C + CTQ+CP ++P I +++ + Sbjct: 343 GNGFDDGKSLIDTYISREEIWACTSCNACTQACPINIDPLAIIIELRRFAVME 395 >gi|197117855|ref|YP_002138282.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197087215|gb|ACH38486.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 656 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 7/105 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + + C C C CP++ I L + ++L + + Sbjct: 267 WKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRIIHDIKVNLLENGVANAGKQQLPLIGE 326 Query: 221 -------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C CP + I K++ L+ K Sbjct: 327 KAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKIVKMRRHLVQEK 371 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 225 YRCHTIMNCTQSCPKG-----LNPAKAIAKIKMMLLDRKI 259 + C C CP LNP + I IK+ LL+ + Sbjct: 274 FSCTECGRCQDLCPAHNTGKPLNPRRIIHDIKVNLLENGV 313 >gi|326794970|ref|YP_004312790.1| hypothetical protein Marme_1697 [Marinomonas mediterranea MMB-1] gi|326545734|gb|ADZ90954.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinomonas mediterranea MMB-1] Length = 641 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 22/121 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAI---LLQAYRWLIDSR 207 ++ G CV C C CP++ D +G A A D + Sbjct: 234 KWNQLLGFDACVQCGRCEAMCPAFAAGQPLNPKKLIQDMVVGLAGGTDANYAGSHYPDPQ 293 Query: 208 DEFQG---------ERLDN-LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + E + L D L+ C T C + CP + AI ++ L Sbjct: 294 GKGREPGSAKGSPTEVITAGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRFLTME 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|331684616|ref|ZP_08385208.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H299] gi|331078231|gb|EGI49437.1| glycolate oxidase, iron-sulfur subunit [Escherichia coli H299] Length = 407 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + Q+ + L CV C C+ +CP+Y D GP + + +++ + Sbjct: 9 MRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVT--- 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 66 ----LKTQEHLDRCLTCRNCETTCPSGVCYHNLL-DIGRDIVEQKV 106 >gi|119474703|ref|ZP_01615056.1| Fe-S oxidoreductase [marine gamma proteobacterium HTCC2143] gi|119450906|gb|EAW32139.1| Fe-S oxidoreductase [marine gamma proteobacterium HTCC2143] Length = 409 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + L+++ + + R R Sbjct: 22 LRSCVHCGFCNATCPTYQELGDERDGPRGRIYLIKQLLETGEATEKTRTHM-------DR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T +C +CP G+ + A I +++R+ Sbjct: 75 CLTCRSCETTCPSGVEYGRL-ADIGKEIIERQ 105 >gi|170691370|ref|ZP_02882535.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia graminis C4D1M] gi|170143575|gb|EDT11738.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia graminis C4D1M] Length = 408 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + ++ L RC T NC +CP G+ K + +I + + K+ Sbjct: 62 AEVTRSTQV-------HLDRCLTCRNCETTCPSGVQYGKLV-EIGRKITEEKV 106 >gi|291333652|gb|ADD93343.1| sulfite reductase [uncultured archaeon MedDCM-OCT-S11-C441] Length = 565 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 18/206 (8%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 I+R++P+ DT+ L VL+ L +K D +LT R + + ++ Sbjct: 228 IFRYDPETSSTG-TDTWLCSLSA-NMSVLEVLRTLKMTQDGSLTFRDGTVD--DPNTAIS 283 Query: 92 IDGTNTLACVKD------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-- 143 ++G L + M+D + ++ + PLP VI+DL +D + S EPW+ Sbjct: 284 VNGRLVLPGLTRLDSVAPMRDGQVSLRIEPLPGFDVIRDLAIDPWSLERKRESSEPWMVA 343 Query: 144 ---KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + KI + +S + +++ YLGPA++ ++ Sbjct: 344 ATREGAQTPQGPIGTMEPGAAAKIHSIRNFASQNIIHSSSDAIP-HANGYLGPAVIASSW 402 Query: 201 RWLIDSR--DEFQGERLDNLEDPFRL 224 D R + + L + Sbjct: 403 SRRNDPRTSPTKRKAIDEMLSSHNGI 428 >gi|297159055|gb|ADI08767.1| iron-sulfur-binding reductase [Streptomyces bingchenggensis BCW-1] Length = 754 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLIDSRDEF 210 C C C + CP+ WN+ + L P +L+ + R + ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHSHAKAPYLLAGGGKNAEGEEKA 355 Query: 211 QGERLDNL---------------------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L ++ DP L+ C T C + CP + I Sbjct: 356 SEEQLASVPAAALAEAERPMIGTLAESGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|225872424|ref|YP_002753879.1| putative iron-sulfur cluster binding protein [Acidobacterium capsulatum ATCC 51196] gi|225791913|gb|ACO32003.1| putative iron-sulfur cluster binding protein [Acidobacterium capsulatum ATCC 51196] Length = 651 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 7/159 (4%) Query: 98 LACVKDMKDIKGAI-AVYPL-PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 A V I A PL PH + L++ + + V + + Sbjct: 200 TAAVALWWVHALTILAFLPLIPHTKHLH-LILSPATVFLSRGEFSRIPPLVGDEDFGLVT 258 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-- 213 + Y CV C C+ CP+ + L P ++ R ++++ E Sbjct: 259 GKDVTKLAALQAYSCVECGRCTEHCPANNTGKE--LNPKQIVLGLRSYLNTQGPASEEPI 316 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 E +++C T C CP G+ I ++ Sbjct: 317 VDGKYETLHSIFQCTTCGACEYQCPVGIEHLPLIIGMRR 355 >gi|170721485|ref|YP_001749173.1| glycolate oxidase iron-sulfur subunit [Pseudomonas putida W619] gi|169759488|gb|ACA72804.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudomonas putida W619] Length = 405 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ + L R Sbjct: 22 LRSCVHCGFCTATCPTYQLLGDELDSPRGRIYLIKQVLEGQPVTAK-------TQAHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++++ Sbjct: 75 CLTCRNCETTCPSGVQYHNLL-DIGRAVVEQQV 106 >gi|297180311|gb|ADI16529.1| Fe-S oxidoreductase [uncultured bacterium HF4000_009C18] Length = 434 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +++ L+ +++ L +CV C C+ +CP+Y D GP + + ++++ Sbjct: 2 ETHFSEQQLKDKDNKSSEKILRKCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + +C +CP G+N I + + Sbjct: 62 NKPANEKIVKHID------RCLSCYSCMTTCPSGVNYMHLIDHGRSHIEK 105 >gi|294630488|ref|ZP_06709048.1| ferredoxin, 4Fe-4S [Streptomyces sp. e14] gi|292833821|gb|EFF92170.1| ferredoxin, 4Fe-4S [Streptomyces sp. e14] Length = 757 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 40/195 (20%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A DM +P D + + T + + Sbjct: 229 ALKTDMGVAWHRFLAFPNIWFKREADGGTALGALQPMTSGGKAIDFTDPGEDDVFGVSQV 288 Query: 159 EDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----------- 205 E C C C + CP+ WN+ + L P +L+ + R Sbjct: 289 EQFSWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGG 346 Query: 206 ----SRDEFQGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ E+L + + DP L+ C T C + CP Sbjct: 347 KTMEGEEKASEEQLAGVPAAALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVD 406 Query: 241 LNPAKAIAKIKMMLL 255 + I ++ + Sbjct: 407 IEHVDHIVDMRRYQV 421 >gi|302864615|ref|YP_003833252.1| hypothetical protein Micau_0107 [Micromonospora aurantiaca ATCC 27029] gi|315500907|ref|YP_004079794.1| hypothetical protein ML5_0089 [Micromonospora sp. L5] gi|302567474|gb|ADL43676.1| protein of unknown function DUF224 cysteine-rich region domain protein [Micromonospora aurantiaca ATCC 27029] gi|315407526|gb|ADU05643.1| protein of unknown function DUF224 cysteine-rich region domain protein [Micromonospora sp. L5] Length = 732 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 40/151 (26%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + + E C C C + CP+ WN+ + L P +L+ + Sbjct: 272 FEEADPEKDQFGVAQVEQFTWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVLSL 329 Query: 201 RWLID---------------SRDEFQGERLDNLE---------------------DPFRL 224 R ++ E+L ++ DP L Sbjct: 330 RDHAYAKAPYLLAGGGKDLTGEEKATQEQLAGVDVLAMAEADRPLIGTAEEGGVIDPDVL 389 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 390 WSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 420 >gi|327479096|gb|AEA82406.1| glycolate oxidase iron-sulfur subunit [Pseudomonas stutzeri DSM 4166] Length = 405 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + +L L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLMKQMLEGGEVTESTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I +++++ Sbjct: 75 CLTCRNCETTCPSGVKYHNLL-DIGRDFIEQQV 106 >gi|145628268|ref|ZP_01784069.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 22.1-21] gi|144980043|gb|EDJ89702.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae 22.1-21] Length = 70 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A+R+ +D+RD + +R+ L ++ C + C++ CPK ++PA AI + K Sbjct: 1 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGK 54 >gi|167580665|ref|ZP_02373539.1| glycolate oxidase iron-sulfur subunit [Burkholderia thailandensis TXDOH] Length = 408 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDGDDADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|83720279|ref|YP_441836.1| glycolate oxidase iron-sulfur subunit [Burkholderia thailandensis E264] gi|167618768|ref|ZP_02387399.1| glycolate oxidase iron-sulfur subunit [Burkholderia thailandensis Bt4] gi|257138005|ref|ZP_05586267.1| glycolate oxidase iron-sulfur subunit [Burkholderia thailandensis E264] gi|83654104|gb|ABC38167.1| glycolate oxidase, iron-sulfur subunit [Burkholderia thailandensis E264] Length = 408 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDGDDADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|92113119|ref|YP_573047.1| protein of unknown function DUF224, cysteine-rich region [Chromohalobacter salexigens DSM 3043] gi|91796209|gb|ABE58348.1| protein of unknown function DUF224, cysteine-rich region [Chromohalobacter salexigens DSM 3043] Length = 670 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 25/117 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI---------------- 204 ++ G CV C C CP++ + L P L+Q + Sbjct: 241 WNQLLGFDACVQCGRCEAVCPAFAA--GQPLNPKKLVQDMVVGMVGGSDARYAGSPYPGK 298 Query: 205 -------DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L D L+ C T C + CP + AI ++ L Sbjct: 299 PVGEHAGDPHGPIVAREGTALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHL 355 >gi|313680540|ref|YP_004058279.1| hypothetical protein Ocepr_1653 [Oceanithermus profundus DSM 14977] gi|313153255|gb|ADR37106.1| protein of unknown function DUF224 cysteine-rich region domain protein [Oceanithermus profundus DSM 14977] Length = 680 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 11/106 (10%) Query: 159 EDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDE 209 ED + Y C+MC C+ CP+ + L PA L+ R+ + + + Sbjct: 273 EDFSWPRLIDPYACIMCNRCADVCPANVT--GKALNPAALIINERYEFNDILPAFAAGEA 330 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ D L+ C T M C + CP G + I+ + Sbjct: 331 SPRPLLEFALDADALWSCTTCMACVEVCPVGNEQMLHLVDIRRERV 376 >gi|300114841|ref|YP_003761416.1| hypothetical protein Nwat_2266 [Nitrosococcus watsonii C-113] gi|299540778|gb|ADJ29095.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosococcus watsonii C-113] Length = 405 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + ++ + + L R Sbjct: 22 LRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKETLEGQPVSRK-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C +CP G+ + + I ++ K+ Sbjct: 75 CLTCRACETTCPSGVRYGRLV-DIGREVVATKV 106 >gi|53720453|ref|YP_109439.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei K96243] gi|76811446|ref|YP_334716.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 1710b] gi|126452136|ref|YP_001067569.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 1106a] gi|134280076|ref|ZP_01766787.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 305] gi|167721104|ref|ZP_02404340.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei DM98] gi|167740074|ref|ZP_02412848.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 14] gi|167817287|ref|ZP_02448967.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 91] gi|167825699|ref|ZP_02457170.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 9] gi|167847185|ref|ZP_02472693.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei B7210] gi|167895770|ref|ZP_02483172.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 7894] gi|167904159|ref|ZP_02491364.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei NCTC 13177] gi|167912417|ref|ZP_02499508.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 112] gi|167920373|ref|ZP_02507464.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei BCC215] gi|217420805|ref|ZP_03452310.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 576] gi|226194218|ref|ZP_03789817.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei Pakistan 9] gi|237813699|ref|YP_002898150.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|242316865|ref|ZP_04815881.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1106b] gi|254180740|ref|ZP_04887338.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1655] gi|254191575|ref|ZP_04898078.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei Pasteur 52237] gi|254194985|ref|ZP_04901415.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei S13] gi|254258865|ref|ZP_04949919.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1710a] gi|254299168|ref|ZP_04966618.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 406e] gi|52210867|emb|CAH36855.1| putative glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei K96243] gi|76580899|gb|ABA50374.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1710b] gi|126225778|gb|ABN89318.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1106a] gi|134248083|gb|EBA48166.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 305] gi|157809238|gb|EDO86408.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 406e] gi|157939246|gb|EDO94916.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei Pasteur 52237] gi|169651734|gb|EDS84427.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei S13] gi|184211279|gb|EDU08322.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1655] gi|217396217|gb|EEC36234.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 576] gi|225933683|gb|EEH29671.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei Pakistan 9] gi|237506213|gb|ACQ98531.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei MSHR346] gi|242140104|gb|EES26506.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1106b] gi|254217554|gb|EET06938.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 1710a] Length = 408 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDGDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|126439029|ref|YP_001060309.1| glycolate oxidase iron-sulfur subunit [Burkholderia pseudomallei 668] gi|126218522|gb|ABN82028.1| glycolate oxidase, iron-sulfur subunit [Burkholderia pseudomallei 668] Length = 408 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDGDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVVETKV 106 >gi|167045725|gb|ABZ10372.1| putative cysteine-rich domain protein [uncultured marine bacterium HF4000_APKG2098] Length = 435 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +K L+ +++ L +CV C C+ +CP+Y D GP + + ++++ Sbjct: 2 ETHFSKSQLKDKDNKSSEKILRKCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + +C +CP G+N I + + Sbjct: 62 NKPANEKIVKHID------RCLSCYSCMTTCPSGVNYMHLIDHGRSHIEK 105 >gi|283780421|ref|YP_003371176.1| hypothetical protein Psta_2647 [Pirellula staleyi DSM 6068] gi|283438874|gb|ADB17316.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pirellula staleyi DSM 6068] Length = 433 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +CV C C+ SCP+Y + P + R + D R E E +LE Sbjct: 14 YELFLDCVHCGLCTASCPTYLETGNENDSPRGRIYLMRAVTDGRLELAPEVRKHLE---- 69 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ K I ++ + Sbjct: 70 --LCLDCRGCETACPSGVQYGKLIEPFRIAM 98 >gi|325106675|ref|YP_004267743.1| hypothetical protein Plabr_0091 [Planctomyces brasiliensis DSM 5305] gi|324966943|gb|ADY57721.1| protein of unknown function DUF224 cysteine-rich region domain protein [Planctomyces brasiliensis DSM 5305] Length = 444 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C+++CP+Y + GP + R + + R E +L+ Sbjct: 17 PHQQLLTCIHCGLCTSACPTYLETGNENDGPRGRIHLMRGVEEKRIELTETVRGHLD--- 73 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ + I + Sbjct: 74 ---LCLDCRACETACPSGVEYGQLIETFR 99 >gi|307728515|ref|YP_003905739.1| hypothetical protein BC1003_0445 [Burkholderia sp. CCGE1003] gi|307583050|gb|ADN56448.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1003] Length = 408 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRNCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q R + L RC T NC +CP G+ K + +I + ++K+ Sbjct: 62 ---AQVTRSTQVH----LDRCLTCRNCESTCPSGVQYGKLV-EIGRKITEQKV 106 >gi|209886393|ref|YP_002290250.1| glycolate oxidase iron-sulfur subunit [Oligotropha carboxidovorans OM5] gi|209874589|gb|ACI94385.1| glycolate oxidase iron-sulfur subunit [Oligotropha carboxidovorans OM5] Length = 449 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D P + + +++ + E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLEKDQKPTAEVVKHID------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N I + ++ + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLIDQARVRVEE 105 >gi|301062922|ref|ZP_07203503.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300442991|gb|EFK07175.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 681 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 19/156 (12%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIE----PWLKTVSPKPAKELLQSHEDRQKID--GLYEC 170 H +I L + F+ + + E + K ++ ED LY C Sbjct: 235 KHFHIITAL---PNVFFRKLKKGEIKPARYGVDDIFDLEKLGVEKIEDFTWKHILDLYTC 291 Query: 171 VMCACCSTSCPSYWWN---SDRYLGPAILLQAYR---WLIDSR----DEFQGERLDNLED 220 C CS +CP+ S + L + AY+ L S DE ++ + Sbjct: 292 TECGRCSDNCPANAIGRPLSPKLLTIKLRDHAYQKYPILPASGACKGDEEPVNMVNGIIG 351 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ C T C + CP + I ++ +L+ Sbjct: 352 LDELWSCTTCGACEEECPVFIEYINKIIDMRRHVLE 387 >gi|302535385|ref|ZP_07287727.1| iron-sulfur-binding reductase [Streptomyces sp. C] gi|302444280|gb|EFL16096.1| iron-sulfur-binding reductase [Streptomyces sp. C] Length = 1036 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 38/131 (29%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 + I C C C + CP+ WN+ + L P +L+ + R Sbjct: 293 WKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTME 350 Query: 206 SRDEFQGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 ++ E+L + + DP L+ C T C + CP + Sbjct: 351 GEEKATAEQLAGVPAAALAEAERPLIGTVEENGVIDPDVLWSCTTCGACVEQCPVDIEHI 410 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 411 DHIVDMRRYQV 421 >gi|330999841|ref|ZP_08323545.1| cysteine-rich domain protein [Parasutterella excrementihominis YIT 11859] gi|329573612|gb|EGG55205.1| cysteine-rich domain protein [Parasutterella excrementihominis YIT 11859] Length = 676 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 6/131 (4%) Query: 129 MSHFYSQHRS---IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 S ++ + + +E + + CV C C++ CP Sbjct: 258 TSIYWQRTKPRGLVEKIDNIEEQESFGISKFGQFNWHDRLNFDACVECGRCTSVCPVNRA 317 Query: 186 NSDRYLGPA-ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 L P I+L + +++ + + + ++ L C T C + CP + Sbjct: 318 GGP--LDPREIILSLKKRMMEGYTKTEEVLVPDVVSKESLLACTTCGACVEQCPSRIEIV 375 Query: 245 KAIAKIKMMLL 255 I +++ L Sbjct: 376 NTIQQMRRSLA 386 >gi|124004668|ref|ZP_01689512.1| 4Fe-4S binding domain protein [Microscilla marina ATCC 23134] gi|123989791|gb|EAY29320.1| 4Fe-4S binding domain protein [Microscilla marina ATCC 23134] Length = 442 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 28/115 (24%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------- 212 + + Y C C C+++CP+ + L P + ++D+RD + Sbjct: 296 WKNLMDAYSCTECGRCTSNCPANIT--GKKLSPRKV------MMDTRDRMEEIGEYIAKG 347 Query: 213 -ERLDNLEDPFRLYR-----------CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E L + LY C T CT +CP ++P I +++ + Sbjct: 348 GELEKALAEGHGLYSDERISKQELMACTTCNACTDACPINIDPLSIILQMRRYIA 402 >gi|303257329|ref|ZP_07343343.1| iron-sulfur cluster-binding protein [Burkholderiales bacterium 1_1_47] gi|302860820|gb|EFL83897.1| iron-sulfur cluster-binding protein [Burkholderiales bacterium 1_1_47] Length = 676 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 6/131 (4%) Query: 129 MSHFYSQHRS---IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 S ++ + + +E + + CV C C++ CP Sbjct: 258 TSIYWQRTKPRGLVEKIDNIEEQESFGISKFGQFNWHDRLNFDACVECGRCTSVCPVNRA 317 Query: 186 NSDRYLGPA-ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 L P I+L + +++ + + + ++ L C T C + CP + Sbjct: 318 GGP--LDPREIILSLKKRMMEGYTKTEEVLVPDVVSKESLLACTTCGACVEQCPSRIEIV 375 Query: 245 KAIAKIKMMLL 255 I +++ L Sbjct: 376 NTIQQMRRSLA 386 >gi|320102348|ref|YP_004177939.1| hypothetical protein Isop_0799 [Isosphaera pallida ATCC 43644] gi|319749630|gb|ADV61390.1| protein of unknown function DUF224 cysteine-rich region domain protein [Isosphaera pallida ATCC 43644] Length = 501 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 6/94 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L + ECV C C+ SCP+Y D P + R ++D R Sbjct: 67 LDWLNQKIDYRRFQECVHCGLCTASCPTYVVTGDENDSPRGRIHLMRSIVDGRLALSDPV 126 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C C +CP G+ A I Sbjct: 127 R------HHLDLCLDCRACETACPSGVQYAHLIE 154 >gi|221632295|ref|YP_002521516.1| 4Fe-4S ferredoxin [Thermomicrobium roseum DSM 5159] gi|221156382|gb|ACM05509.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function, cysteine-rich region [Thermomicrobium roseum DSM 5159] Length = 449 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D D + +CV C C SCP+Y P + + + + R + Sbjct: 17 DAPSYDAIRKCVHCGFCLPSCPTYRVTWRERSSPRGRIWLMKSVAEGRLDLLDPVFA--- 73 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C CP G++ + + + L+ + Sbjct: 74 --EEMQLCLNCRACEAVCPSGVHYGEILEASRAQLVQHR 110 >gi|33593841|ref|NP_881485.1| glycolate oxidase iron-sulfur subunit [Bordetella pertussis Tohama I] gi|33597081|ref|NP_884724.1| glycolate oxidase iron-sulfur subunit [Bordetella parapertussis 12822] gi|33600925|ref|NP_888485.1| glycolate oxidase iron-sulfur subunit [Bordetella bronchiseptica RB50] gi|33563914|emb|CAE43175.1| glycolate oxidase iron-sulfur subunit [Bordetella pertussis Tohama I] gi|33566532|emb|CAE37788.1| glycolate oxidase iron-sulfur subunit [Bordetella parapertussis] gi|33568525|emb|CAE32437.1| glycolate oxidase iron-sulfur subunit [Bordetella bronchiseptica RB50] gi|332383260|gb|AEE68107.1| glycolate oxidase iron-sulfur subunit [Bordetella pertussis CS] Length = 409 Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + L++ + Q L R Sbjct: 22 LRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQLLEGSEPTQA-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + + I L+ ++ Sbjct: 75 CLTCRNCETTCPSGVEYGRLV-DIGRQLVHERV 106 >gi|78222923|ref|YP_384670.1| hypothetical protein Gmet_1714 [Geobacter metallireducens GS-15] gi|78194178|gb|ABB31945.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 671 Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 17/150 (11%) Query: 113 VYPLPHMSVIKDLVVDMSHFY----SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 + LP+ + L ++ F+ + ++ S + + + I Sbjct: 231 IAALPYTKLRHILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDAD 290 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQ----AYRWLIDSRDEFQGERLDNLEDPFRL 224 C C C CP+ W +++ L P +++ A DS L L Sbjct: 291 ACTSCKRCQDRCPA--WATEKPLSPMKVVKQVCEAAWSAPDS-------SLVETVTADVL 341 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C T C CP + I +++ L Sbjct: 342 WSCTTCRACQDVCPAEIEHVNKILEMRRSL 371 >gi|302559513|ref|ZP_07311855.1| ferredoxin, 4Fe-4S [Streptomyces griseoflavus Tu4000] gi|302477131|gb|EFL40224.1| ferredoxin, 4Fe-4S [Streptomyces griseoflavus Tu4000] Length = 760 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L + + DP L+ C T C + CP + I Sbjct: 356 SEEQLAGVPAAALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|297201189|ref|ZP_06918586.1| Iron-sulfur-binding reductase [Streptomyces sviceus ATCC 29083] gi|197713741|gb|EDY57775.1| Iron-sulfur-binding reductase [Streptomyces sviceus ATCC 29083] Length = 753 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 291 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 348 Query: 211 QGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L + + DP L+ C T C + CP + I Sbjct: 349 SEEQLAGVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 408 Query: 250 IKMMLL 255 ++ + Sbjct: 409 MRRYQV 414 >gi|331014934|gb|EGH94990.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 653 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTLEK 355 >gi|28867627|ref|NP_790246.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850862|gb|AAO53941.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 669 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 252 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 311 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 312 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTLEK 371 >gi|301059489|ref|ZP_07200402.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300446384|gb|EFK10236.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 366 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +++ D + C C C CP + L + + ++D E ++ L Sbjct: 8 EKKFRDQVLRCSSCGFCRAVCPVFGLTKRPALNARGKMLILKEVMDGNIPLNDELVETL- 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++C T +C CP G+NP + I +++ ++ Sbjct: 67 -----FQCTTCASCADQCPSGVNPPEIIKQVRKDMVQ 98 >gi|54027394|ref|YP_121636.1| putative iron-sulfur-binding reductase [Nocardia farcinica IFM 10152] gi|54018902|dbj|BAD60272.1| putative iron-sulphur-binding reductase [Nocardia farcinica IFM 10152] Length = 1121 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 59/203 (29%), Gaps = 51/203 (25%) Query: 102 KDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYSQHRSIEPW-LKTVSPKPAKELLQSH 158 +++ P+ +D V + +P ++T P Sbjct: 262 RNITWGVAWHRFSAFPNIYFKREEDGGVALGAARPMMSKGKPVDMETADPDTDTFGAGKF 321 Query: 159 EDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------WLIDSR 207 ED C C C + CP+ WN+ + L P +L+ + R L R Sbjct: 322 EDFTWKGILDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHGYAKAPYLLAGGR 379 Query: 208 -----------------DEFQ-----------GER-------LDNLEDPFRLYRCHTIMN 232 DE + ER + + DP L+ C T Sbjct: 380 KDMGGDEIGLVDAEGNPDEAKLAKIPASARAEAERPLVGDAEANGIIDPEVLWSCTTCGA 439 Query: 233 CTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 440 CVEQCPVDIEHVDHIIDMRRYQV 462 >gi|213968985|ref|ZP_03397125.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tomato T1] gi|301382778|ref|ZP_07231196.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tomato Max13] gi|302061883|ref|ZP_07253424.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tomato K40] gi|302134553|ref|ZP_07260543.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926284|gb|EEB59839.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. tomato T1] Length = 410 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHTRTQPRAEEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC + NC +CP G++ + I +D + Sbjct: 62 QQVTEKTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDAVV 106 >gi|21227081|ref|NP_633003.1| heterodisulfide reductase subunit HDRC [Methanosarcina mazei Go1] gi|41017210|sp|Q8PY84|HDRC_METMA RecName: Full=CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit C gi|20905408|gb|AAM30675.1| heterodisulfide reductase subunit HDRC [Methanosarcina mazei Go1] Length = 161 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ SCPS G L R + D+R + L+ C T Sbjct: 19 CMHCGTCTGSCPS---------GRHTGLNTRRIIRDARKNR-----ATVLSDDALWLCTT 64 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+G+ A+ +++ + + + Sbjct: 65 CYTCQERCPRGIPITDALLELRRLAVRKG 93 >gi|238061974|ref|ZP_04606683.1| hypothetical protein MCAG_02940 [Micromonospora sp. ATCC 39149] gi|237883785|gb|EEP72613.1| hypothetical protein MCAG_02940 [Micromonospora sp. ATCC 39149] Length = 749 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 40/151 (26%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + + E C C C + CP+ WN+ + L P +L+ + Sbjct: 271 FEEADPEKDQFGVAQVEQFTWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVLSL 328 Query: 201 RWLID---------------SRDEFQGERLDNLE---------------------DPFRL 224 R ++ +L +L+ DP L Sbjct: 329 RDHAYAKAPYLLAGGGKDLTGEEKATAAQLAHLDVLALAEADKPLIGGAEDGGVIDPDVL 388 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 389 WSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 419 >gi|221200342|ref|ZP_03573384.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2M] gi|221206021|ref|ZP_03579035.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2] gi|221174033|gb|EEE06466.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2] gi|221179683|gb|EEE12088.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2M] Length = 641 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSALIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|221209376|ref|ZP_03582357.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD1] gi|221170064|gb|EEE02530.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD1] Length = 641 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSALIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|187922724|ref|YP_001894366.1| glycolate oxidase iron-sulfur subunit [Burkholderia phytofirmans PsJN] gi|187713918|gb|ACD15142.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phytofirmans PsJN] Length = 408 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADGILRNCVHCGFCTATCPTYQILGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ L RC T NC +CP G+ + + +I L + K+ Sbjct: 62 APVTRSTQV-------HLDRCLTCRNCESTCPSGVQYGRLV-EIGRKLTEEKV 106 >gi|161520099|ref|YP_001583526.1| hypothetical protein Bmul_3550 [Burkholderia multivorans ATCC 17616] gi|189353722|ref|YP_001949349.1| heterodisulfide reductase [Burkholderia multivorans ATCC 17616] gi|160344149|gb|ABX17234.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia multivorans ATCC 17616] gi|189337744|dbj|BAG46813.1| heterodisulfide reductase [Burkholderia multivorans ATCC 17616] Length = 641 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSALIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|330989476|gb|EGH87579.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011797|gb|EGH91853.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|330980073|gb|EGH78309.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGSPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|330972931|gb|EGH72997.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. aceris str. M302273PT] Length = 654 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 237 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 296 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 297 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 356 >gi|330955009|gb|EGH55269.1| 4Fe-4S ferredoxin [Pseudomonas syringae Cit 7] Length = 543 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 126 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 185 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 186 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 245 >gi|330898986|gb|EGH30405.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. japonica str. M301072PT] Length = 688 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 271 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 330 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 331 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 390 >gi|330891366|gb|EGH24027.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|330869851|gb|EGH04560.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 593 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 192 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 251 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 252 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 311 >gi|320331667|gb|EFW87605.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872390|gb|EGH06539.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|311897202|dbj|BAJ29610.1| putative iron-sulfur binding reductase [Kitasatospora setae KM-6054] Length = 743 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 81/278 (29%), Gaps = 69/278 (24%) Query: 45 MDTYYVDLD-----NCGPMV--LDGLLYIKNKIDPTLTLRRSCREGICGSCG-MNIDGTN 96 +YV+ C M+ L+G L + DP + G+ ++ Sbjct: 150 WQAFYVEYTILGIGLCIMMLRGLEGALEGVDSYDPAYLVSYPIAAAFHGTAHGTLVNLVY 209 Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVI-KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 A +K AI + P M V + + ++ + L + P + Sbjct: 210 LFAMLKICISFAWAITIGVNPSMGVAWHRFLAFFNIYFKREDDGGTALGALRPMTSGGAP 269 Query: 156 QSHED----------------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 ED + I C C C + CP+ WN+ + L P +L+ + Sbjct: 270 IDFEDPADDAVFGVSQVEHFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMS 327 Query: 200 YRWL---------------IDSRDEFQGERLDNL-------------------------- 218 R ++ + E+L + Sbjct: 328 LREHAFAKAPYLLAGGGKSMEGEERATAEQLAGVPAAALAEAERPLIGTAEAGPNGELGG 387 Query: 219 -EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C T C + CP + I ++ + Sbjct: 388 VIDPDVLWSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 425 >gi|302186147|ref|ZP_07262820.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. syringae 642] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|298485229|ref|ZP_07003322.1| Iron-sulfur cluster-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160217|gb|EFI01245.1| Iron-sulfur cluster-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|289624276|ref|ZP_06457230.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646903|ref|ZP_06478246.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|71733671|ref|YP_276909.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554224|gb|AAZ33435.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326342|gb|EFW82395.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 653 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 295 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|66048005|ref|YP_237846.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. syringae B728a] gi|63258712|gb|AAY39808.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 [Pseudomonas syringae pv. syringae B728a] Length = 654 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW------LIDS 206 ++ G CV C C +CP++ + ++ +D Sbjct: 237 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDG 296 Query: 207 RDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + GE ++ L D L+ C T C + CP + AI ++ L K Sbjct: 297 KGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 356 >gi|209520450|ref|ZP_03269210.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] gi|209499095|gb|EDZ99190.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] Length = 408 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L++CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADSILHKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ L RC T NC +CP G+ + + I L + K+ Sbjct: 62 APVTRSTQV-------HLDRCLTCRNCESTCPSGVQYGRLV-DIGRKLTEEKV 106 >gi|126738191|ref|ZP_01753912.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. SK209-2-6] gi|126720688|gb|EBA17393.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. SK209-2-6] Length = 455 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 6/116 (5%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 W V KE LQ + + L CV C C+ +CP+Y D P + Sbjct: 11 RWRCEVQTNFTKEQLQDPGIERANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLI 70 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + D + ER+ + + + RC + + C +CP G++ I + + Sbjct: 71 K------DMLENERIPDEKTVKHIDRCLSCLACMSTCPSGVHYMHLIDHARAYVEK 120 >gi|148263663|ref|YP_001230369.1| hypothetical protein Gura_1600 [Geobacter uraniireducens Rf4] gi|146397163|gb|ABQ25796.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 661 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 9/146 (6%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLY 168 + +P + ++ +S + E + + + I Sbjct: 231 IAIIPFTKLRHIFTTSANYLFSDLSPKGTICTINMEDESIEQFGAAKVSDLTWKDIFDAD 290 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C CP++ D+ L P L++ + + + L ++ C Sbjct: 291 ACTSCKRCQDRCPAHGT--DKPLSPMKLVRQVGEIAFTNPQGS---LIETITEDAIWSCT 345 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 T C + CP G+ I +++ L Sbjct: 346 TCRACQEICPAGIEHVNKILEMRRNL 371 >gi|71280367|ref|YP_270674.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] gi|71146107|gb|AAZ26580.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] Length = 661 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 21/112 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE------ 213 ++ CV C C +CP++ + L P L+Q + D+ + Sbjct: 237 KWTQLLSFDACVECGRCENNCPAFAA--GQPLNPKKLIQDMVIGMAGGDDAKFAGSPYPG 294 Query: 214 -------------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ L + L+ C T C +CP + AI ++ Sbjct: 295 IKVGTHKGGAIIPIVNVLVESDTLWSCTTCRACVDACPMMIEHVDAIVDMRR 346 >gi|70733024|ref|YP_262797.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] gi|68347323|gb|AAY94929.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] Length = 649 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C +CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAQFAGSPYPGKAI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|331015835|gb|EGH95891.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 410 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHARTQPRAEEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC + NC +CP G++ + I +D + Sbjct: 62 QQVTEKTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDAVV 106 >gi|330964330|gb|EGH64590.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 410 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHARTQPRAEEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC + NC +CP G++ + I +D + Sbjct: 62 QQVTEKTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDAVV 106 >gi|330874657|gb|EGH08806.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 653 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY----------------RWLI 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDATFAGSPYPSL 293 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + GE ++ L D L+ C T C + CP + AI ++ L Sbjct: 294 DGKGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 353 Query: 257 RK 258 K Sbjct: 354 EK 355 >gi|302132066|ref|ZP_07258056.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 670 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY----------------RWLI 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 253 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDANFAGSPYPSL 310 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + GE ++ L D L+ C T C + CP + AI ++ L Sbjct: 311 DGKGKPLGEHSGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 370 Query: 257 RK 258 K Sbjct: 371 EK 372 >gi|302062101|ref|ZP_07253642.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato K40] Length = 653 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY----------------RWLI 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDANFAGSPYPSL 293 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + GE ++ L D L+ C T C + CP + AI ++ L Sbjct: 294 DGKGKPLGEHSGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 353 Query: 257 RK 258 K Sbjct: 354 EK 355 >gi|213967830|ref|ZP_03395977.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] gi|301382467|ref|ZP_07230885.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato Max13] gi|213927606|gb|EEB61154.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] Length = 653 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY----------------RWLI 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDANFAGSPYPSL 293 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + GE ++ L D L+ C T C + CP + AI ++ L Sbjct: 294 DGKGKPLGEHSGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 353 Query: 257 RK 258 K Sbjct: 354 EK 355 >gi|289770719|ref|ZP_06530097.1| Iron-sulfur-binding reductase [Streptomyces lividans TK24] gi|289700918|gb|EFD68347.1| Iron-sulfur-binding reductase [Streptomyces lividans TK24] Length = 753 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 291 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 348 Query: 211 QGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L + + DP L+ C T C + CP + I Sbjct: 349 SAEQLAGVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 408 Query: 250 IKMMLL 255 ++ + Sbjct: 409 MRRYQV 414 >gi|21222086|ref|NP_627865.1| iron-sulphur-binding reductase [Streptomyces coelicolor A3(2)] gi|256786826|ref|ZP_05525257.1| iron-sulphur-binding reductase [Streptomyces lividans TK24] gi|5019323|emb|CAB44376.1| putative iron-sulphur-binding reductase [Streptomyces coelicolor A3(2)] Length = 760 Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 38/126 (30%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEF 210 C C C + CP+ WN+ + L P +L+ + R ++ Sbjct: 298 DFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTMEGEEKA 355 Query: 211 QGERL---------------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 E+L + + DP L+ C T C + CP + I Sbjct: 356 SAEQLAGVPAAALAEAERPLIGTLEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVD 415 Query: 250 IKMMLL 255 ++ + Sbjct: 416 MRRYQV 421 >gi|51891761|ref|YP_074452.1| putative iron-sulfur cluster-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855450|dbj|BAD39608.1| putative iron-sulfur cluster-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 695 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 24/183 (13%) Query: 95 TNTLACVKDMKDIKGAIA---VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV---SP 148 L + + I+ + +P+ +I L + F S R T Sbjct: 208 EAMLVLHRILWWFHMVISFGFIALMPYTKMIHILTGPANIFLSDLRPAGIMAATDLEAEN 267 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + L C C C +CP++ + L P L+ + + + Sbjct: 268 PVLGAATLWDFRWKDLADLDACTECGRCQENCPAFLT--GKPLNPKKLILDLQRHLHEQG 325 Query: 209 ------EFQGER----------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +GER + ++ P ++ C T C + CP + I +++ Sbjct: 326 PLLALAAMKGERPAEQPFESQLVGSVVQPDEIWACTTCRACMEVCPVFIEHVPKIVEMRR 385 Query: 253 MLL 255 + Sbjct: 386 HQV 388 >gi|90426205|ref|YP_534575.1| protein of unknown function DUF224, cysteine-rich region [Rhodopseudomonas palustris BisB18] gi|90108219|gb|ABD90256.1| protein of unknown function DUF224, cysteine-rich region [Rhodopseudomonas palustris BisB18] Length = 437 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + L CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTEFNLAQLADPDIAVADGILRACVHCGFCTATCPTYVLLGDELDSPRGRIVLIKEMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G+N + + + + Sbjct: 62 NAPPTAEVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARARIEK 105 >gi|311695913|gb|ADP98786.1| protein of unknown function cysteine-rich region domain protein [marine bacterium HP15] Length = 402 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + E ++ L CV C C+ +CP+Y +D GP + + ++ Sbjct: 2 QTNLVQQFANTKEGQEAESILRACVHCGFCTATCPTYQELNDERDGPRGRIYLMKMFLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L RC T +C +CP G+ + + I L+++++ Sbjct: 62 AEVTEKTR-------EHLDRCLTCRSCETTCPSGVQYGRLV-DISRGLMEKEM 106 >gi|159035733|ref|YP_001534986.1| hypothetical protein Sare_0059 [Salinispora arenicola CNS-205] gi|157914568|gb|ABV95995.1| protein of unknown function DUF224 cysteine-rich region domain protein [Salinispora arenicola CNS-205] Length = 718 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 42/154 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + + E C C C + CP+ WN+ + L P +L+ + Sbjct: 271 FEEADPEKDQFGVAQVEQFTWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVLSL 328 Query: 201 RWLID----------SRD-----EFQGERLDNLE---------------------DPFRL 224 R RD + +L +++ DP L Sbjct: 329 RDHAYAKAPYLLAGGGRDLAGAEQATAAQLAHVDALALAEAEKPLIGGAEESGVIDPDVL 388 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKM--MLLD 256 + C T C + CP + I ++ ML++ Sbjct: 389 WSCTTCGACVEQCPVDIEHVDHIVDMRRYQMLIE 422 >gi|134102798|ref|YP_001108459.1| glycolate oxidase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|291005903|ref|ZP_06563876.1| glycolate oxidase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|133915421|emb|CAM05534.1| glycolate oxidase iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] Length = 441 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + + +CV C C SCP+Y + P + + ++ Sbjct: 12 PQRELIDDCVHCGFCLPSCPTYELWGEEMDSPRGRIYLMKEGLEGEPMTGSMV------- 64 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C M C +CP G+ I + + + R Sbjct: 65 GHFDACLGCMACVTACPSGVQYGTLITETRAQVERR 100 >gi|193083869|gb|ACF09550.1| sulfite reductase [NADPH] flavoprotein alpha-component [uncultured marine group II euryarchaeote KM3-85-F5] Length = 658 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 75/226 (33%), Gaps = 20/226 (8%) Query: 13 KRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP 72 + G E I+R++P ++ +L L +K+ D Sbjct: 302 EDGFTLPTLLAAPMQAEITIFRYDPVAACTGR--DTWMCALPGHMSILGALRTLKDSQDG 359 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLV 126 +L+ R + + + ++G L + + I + PLP +++DLV Sbjct: 360 SLSFRDGACD--DPNTAITVNGRLVLPGLARLDSFPPTRDGAVRIRIEPLPGFDIVRDLV 417 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 +D + S +PW+ + + A + S P + Sbjct: 418 IDPWSLERKRESSKPWMVAATREGASTPQGPMG--TMDPAAASHLHSVTDYQSQPLLHAS 475 Query: 187 SDR------YLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRL 224 SD YLGPA+L A+ D R + E + + + Sbjct: 476 SDAVPHANGYLGPAVLASAWARRNDPRTSPHRRSEIDELVGSGNGI 521 >gi|256424852|ref|YP_003125505.1| hypothetical protein Cpin_5886 [Chitinophaga pinensis DSM 2588] gi|256039760|gb|ACU63304.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chitinophaga pinensis DSM 2588] Length = 440 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + Y C C C+ +CP+ + L P + ++D+RD + L ++ Sbjct: 298 WKNLLDAYSCTECGRCTAACPANIT--GKKLSPR------KIMMDTRDRAEEIGLQIAKN 349 Query: 221 ----------------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C Q CP +NP I +++ L+ Sbjct: 350 GSFSEDGKTLLRDYISEEELRACTSCNACVQECPVSINPLHIILQLRRQLVME 402 >gi|171184756|ref|YP_001793675.1| hypothetical protein Tneu_0277 [Thermoproteus neutrophilus V24Sta] gi|170933968|gb|ACB39229.1| protein of unknown function DUF162 [Thermoproteus neutrophilus V24Sta] Length = 391 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 17/100 (17%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV C C CP Y Y GP ++ + D L Sbjct: 300 WEALLCVRCGRCHFHCPVYRALGREFGVPPYTGPMGVMWTA--VTRGLDAAGPHALK--- 354 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C NC + CP G++ K I +I+ L R++ Sbjct: 355 -------CAHAGNCKEVCPMGIDIPKVIHEIRARYLKREV 387 >gi|15806733|ref|NP_295453.1| glycolate oxidase, iron-sulfur subunit [Deinococcus radiodurans R1] gi|6459500|gb|AAF11285.1|AE002014_6 glycolate oxidase, iron-sulfur subunit [Deinococcus radiodurans R1] Length = 425 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y D P + + +++ L+ + Sbjct: 17 MAHAIDACVHCGFCLPACPTYALLGDEMDSPRGRIVLMKEVLEG-------SLELEDAAP 69 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L RC C +CP G+ + I + Sbjct: 70 HLDRCLGCQGCVTACPSGVPYGELITSFR 98 >gi|167837774|ref|ZP_02464657.1| glycolate oxidase iron-sulfur subunit [Burkholderia thailandensis MSMB43] Length = 408 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRHTPDGDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T +C +CP G+ + + I +++ K+ Sbjct: 62 AEVTRS-------TQQHLDRCLTCRSCETTCPSGVEYGRLV-DIGRKVIETKV 106 >gi|326331805|ref|ZP_08198092.1| iron-sulfur cluster-binding protein [Nocardioidaceae bacterium Broad-1] gi|325950302|gb|EGD42355.1| iron-sulfur cluster-binding protein [Nocardioidaceae bacterium Broad-1] Length = 1135 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 28/123 (22%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWN---SDRYLGPAILLQAYRWLIDS----------- 206 + I C C C + CP++ S + L + AY DS Sbjct: 316 WKGILDFTTCTECGRCQSQCPAWNTEKPLSPKLLVMGLREHAYAAAGDSDLKEKPLIGKA 375 Query: 207 -----RDEFQGERLD---------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 E E LD + D L+ C + C Q CP + I ++ Sbjct: 376 DAAPAGAESNTEVLDWFYNPEDGGFVIDEDVLWSCTSCGACVQQCPVDIEHVDHIMDMRR 435 Query: 253 MLL 255 + Sbjct: 436 YQV 438 >gi|254000159|ref|YP_003052222.1| hypothetical protein Msip34_2458 [Methylovorus sp. SIP3-4] gi|253986838|gb|ACT51695.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylovorus sp. SIP3-4] Length = 707 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 12/107 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNL 218 +++ L C C C +CP+ L P ++ + R + S + L Sbjct: 303 KWKELLHLDACTKCGRCHEACPANAV--GAPLSPRDVILSLREFANHSLNAATLPEKAEL 360 Query: 219 EDP---------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + L+ C T + C + CP + I +++ L++ Sbjct: 361 DVHGKGPGQVFMETLWSCRTCLACVEICPVAVEHVPIIVQMRRKLVE 407 >gi|148261531|ref|YP_001235658.1| hypothetical protein Acry_2548 [Acidiphilium cryptum JF-5] gi|326405019|ref|YP_004285101.1| glycolate oxidase iron-sulfur subunit [Acidiphilium multivorum AIU301] gi|146403212|gb|ABQ31739.1| protein of unknown function DUF224, cysteine-rich region domain protein [Acidiphilium cryptum JF-5] gi|325051881|dbj|BAJ82219.1| glycolate oxidase iron-sulfur subunit [Acidiphilium multivorum AIU301] Length = 436 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + L CV C C+ +CP++ D P + + ++++ Sbjct: 2 QTNFTPDQLADPDIAVADRILRSCVHCGFCTATCPTFVTVGDEDDSPRGRIYMIKDMLET 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 F L RC + ++C +CP G++ I + + + Sbjct: 62 GAPASEPV------AFHLDRCLSCLSCMTTCPSGVDYMHLIDHARTRVEE 105 >gi|298293844|ref|YP_003695783.1| hypothetical protein Snov_3894 [Starkeya novella DSM 506] gi|296930355|gb|ADH91164.1| protein of unknown function DUF224 cysteine-rich region domain protein [Starkeya novella DSM 506] Length = 439 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L + + L CV C C+ +CP+Y D P + + ++++ E Sbjct: 9 QLADPQTARSEQVLRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKDMLENDRPATAE 68 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +++ RC + ++C +CP G++ I + Sbjct: 69 VAKHID------RCLSCLSCMTTCPSGVHYMHLIDHAR 100 >gi|148657707|ref|YP_001277912.1| hypothetical protein RoseRS_3607 [Roseiflexus sp. RS-1] gi|148569817|gb|ABQ91962.1| protein of unknown function DUF224, cysteine-rich region domain protein [Roseiflexus sp. RS-1] Length = 445 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 5/112 (4%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + + D + CV C C +CP+Y P + + + D Sbjct: 4 EHEITARVPFAGPDIPSDTVINSCVHCGLCLPACPTYRETGLEQFSPRGRIYLMKAVADG 63 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R + E C C CP G+ + + + + K Sbjct: 64 RIGMESEVFQEQMS-----ACLNCRACEAVCPSGVLYGQILEASRTQIEQAK 110 >gi|330464957|ref|YP_004402700.1| hypothetical protein VAB18032_04870 [Verrucosispora maris AB-18-032] gi|328807928|gb|AEB42100.1| hypothetical protein VAB18032_04870 [Verrucosispora maris AB-18-032] Length = 732 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 40/151 (26%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + + E C C C + CP+ WN+ + L P +L+ + Sbjct: 271 FEEADPEKDQFGVAQVEQFTWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVLSL 328 Query: 201 RWLID---------------SRDEFQGERLDNLE---------------------DPFRL 224 R ++ +L +++ DP L Sbjct: 329 RDHAYAKAPYLLAGGGKDLTGEEKATAAQLAHVDVLALAEAEKPLIGDAEAGGVIDPDVL 388 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C + CP + I ++ + Sbjct: 389 WSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 419 >gi|329902650|ref|ZP_08273208.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327548681|gb|EGF33327.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 410 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ +L L R Sbjct: 22 LRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGVTPTTKTQL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + +C +CP G+ + + +I +D ++ Sbjct: 75 CLSCRSCETTCPSGVQYGRLL-EIGRKAVDAQV 106 >gi|223938752|ref|ZP_03630641.1| protein of unknown function DUF224 cysteine-rich region domain protein [bacterium Ellin514] gi|223892603|gb|EEF59075.1| protein of unknown function DUF224 cysteine-rich region domain protein [bacterium Ellin514] Length = 443 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 6/91 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C +CP+Y P + R + D R E D + Y C Sbjct: 27 QCMHCGLCLPTCPTYDATKLERNSPRGRISLMRAIADGRLEPTQTFADEM------YFCL 80 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C +CP G+N A+ + + Sbjct: 81 GCLACMTACPAGVNYAELFEHARAEAEQSGV 111 >gi|149376071|ref|ZP_01893837.1| glycolate oxidase iron-sulfur subunit [Marinobacter algicola DG893] gi|149359708|gb|EDM48166.1| glycolate oxidase iron-sulfur subunit [Marinobacter algicola DG893] Length = 402 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + E ++ L CV C C+ +CP+Y +D GP + + ++ Sbjct: 2 QTNLVQQFANTPEGQEAESILRACVHCGFCTATCPTYQELNDERDGPRGRIYLMKMFLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + R L RC T +C +CP G+ + + I L+++++ Sbjct: 62 EEVTEKSR-------EHLDRCLTCRSCETTCPSGVKYGRLV-DISRGLMEQEM 106 >gi|322419391|ref|YP_004198614.1| hypothetical protein GM18_1875 [Geobacter sp. M18] gi|320125778|gb|ADW13338.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 657 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 18/112 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA---------YRWLIDSRDEFQ 211 + + + C C C SCP+ + L P ++ A S D Sbjct: 262 WKDLLDSFSCTECGRCQQSCPAAAT--GKALNPRQVIHAIKENLLQNGAAMEKLSGDAEA 319 Query: 212 GERLDNLED-------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + D L+ C + C ++CP + I K++ L+ Sbjct: 320 ERCVSLIGDGVHGGTKESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQ 371 Score = 40.1 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 10/61 (16%) Query: 205 DSRDEFQGERL--DNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDR 257 +S +RL +L D + C C QSCP K LNP + I IK LL Sbjct: 250 NSYGAATVDRLSWKDLLDS---FSCTECGRCQQSCPAAATGKALNPRQVIHAIKENLLQN 306 Query: 258 K 258 Sbjct: 307 G 307 >gi|84495386|ref|ZP_00994505.1| putative iron-sulphur-binding reductase [Janibacter sp. HTCC2649] gi|84384879|gb|EAQ00759.1| putative iron-sulphur-binding reductase [Janibacter sp. HTCC2649] Length = 1303 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 45/153 (29%), Gaps = 46/153 (30%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + ED C C C + CP+ WN+D+ L P +L+ Sbjct: 293 NEDEDAPEPVLGVGKIEDFTWKGLLDFSTCTECGRCQSQCPA--WNTDKPLSPKLLMMTL 350 Query: 201 R--------WLIDSRDEFQGERL--------------------------------DNLED 220 R WL+ S E E L D + D Sbjct: 351 RDHANAKSPWLLAS--EEARESLPAATTALAEVPLIGETGYDIRNPLTAYNPHGPDAVID 408 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L+ C T C + CP + AI ++ Sbjct: 409 LDVLWSCTTCGACVEQCPVDIEHVDAIVDMRRY 441 >gi|187921049|ref|YP_001890081.1| glycolate oxidase iron-sulfur subunit [Burkholderia phytofirmans PsJN] gi|187719487|gb|ACD20710.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phytofirmans PsJN] Length = 409 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 8/96 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y + GP + + +++ Q Sbjct: 19 EQILRSCVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQMLEGEPVTQK-------TQMH 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC + NC +CP G+ A+ I L+R+I Sbjct: 72 LDRCLSCRNCETTCPSGVTY-HALLDIGRAELERRI 106 >gi|114769980|ref|ZP_01447590.1| glycolate oxidase, iron-sulfur subunit [alpha proteobacterium HTCC2255] gi|114549685|gb|EAU52567.1| glycolate oxidase, iron-sulfur subunit [alpha proteobacterium HTCC2255] Length = 426 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K L + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFTKAQLNEPKIARSNAVLRNCVHCGFCTATCPTYQILGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + + + +++ RC + + C +CP G+N + + + Sbjct: 62 QRKPDAKVVKHVD------RCLSCLACMTTCPSGVNYMHLVDHAREYI 103 >gi|313202124|ref|YP_004040782.1| hypothetical protein MPQ_2402 [Methylovorus sp. MP688] gi|312441440|gb|ADQ85546.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 707 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 12/107 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNL 218 +++ L C C C +CP+ L P ++ + R + S + L Sbjct: 303 KWKELLHLDACTKCGRCHEACPANAV--GAPLSPRDVILSLREFANQSLNAATLPEKAEL 360 Query: 219 EDP---------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + L+ C T + C + CP + I +++ L++ Sbjct: 361 DVHGKGPGQVFMETLWSCRTCLACVEICPVAVEHVPIIVQMRRKLVE 407 >gi|291286071|ref|YP_003502887.1| hypothetical protein Dacet_0125 [Denitrovibrio acetiphilus DSM 12809] gi|290883231|gb|ADD66931.1| protein of unknown function DUF224 cysteine-rich region domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 643 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCAC 175 HM VI L +F ++ + I P + ++ E + + + C C Sbjct: 214 KHMHVITALPNV--YFRAKSKPIIPKREKFEDGNTYGAGKADEFSWKDLLDSFTCTECGR 271 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-------PFRLYRCH 228 C +CP+ + I + + G+ + L ++ C Sbjct: 272 CQDNCPANLTDKPLNPRTLIHTIKDNLNANGKGLKTGDIKEPLIGNSDYSVAKDTIWSCL 331 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 T C +CP + A I K++ L++ Sbjct: 332 TCAACMTACPVFIEHAPKIIKMRRKLVE 359 >gi|77164359|ref|YP_342884.1| glycolate oxidase iron-sulfur subunit [Nitrosococcus oceani ATCC 19707] gi|254434353|ref|ZP_05047861.1| Cysteine-rich domain protein [Nitrosococcus oceani AFC27] gi|76882673|gb|ABA57354.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207090686|gb|EDZ67957.1| Cysteine-rich domain protein [Nitrosococcus oceani AFC27] Length = 405 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A + + + R+ L CV C C+ +CP+Y D GP + + ++ Sbjct: 2 QTQLADFIKNTPQGREADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKEAVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + L RC T C +CP G+ + + I ++ K+ Sbjct: 62 QTVSRK-------TQQHLDRCLTCRACETTCPSGVRYGRLV-DIGREVVATKV 106 >gi|171315421|ref|ZP_02904658.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MEX-5] gi|171099421|gb|EDT44156.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MEX-5] Length = 641 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|170697172|ref|ZP_02888267.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] gi|170138008|gb|EDT06241.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] Length = 641 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|172064029|ref|YP_001811680.1| hypothetical protein BamMC406_5018 [Burkholderia ambifaria MC40-6] gi|171996546|gb|ACB67464.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MC40-6] Length = 641 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|115359239|ref|YP_776377.1| hypothetical protein Bamb_4493 [Burkholderia ambifaria AMMD] gi|115284527|gb|ABI90043.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia ambifaria AMMD] Length = 641 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|149177616|ref|ZP_01856218.1| hypothetical protein PM8797T_00377 [Planctomyces maris DSM 8797] gi|148843596|gb|EDL57957.1| hypothetical protein PM8797T_00377 [Planctomyces maris DSM 8797] Length = 453 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + ++V + E + +C+ C C+ +CP+Y + P Sbjct: 1 MKPGSSFSQSVDVSKDSTEIPGSE--IPYEKFLDCIHCGLCTAACPTYLETGNENDSPRG 58 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R ++D R E +L+ C +C +CP G+ + I + Sbjct: 59 RIYLMRAVVDQRVELSDAVRGHLD------LCLDCRSCETACPSGVQYGRLIEPFR 108 >gi|253700010|ref|YP_003021199.1| hypothetical protein GM21_1382 [Geobacter sp. M21] gi|251774860|gb|ACT17441.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 722 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 12/139 (8%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + DL S + S + I C C C Sbjct: 246 PANYLFTDLRPKGSIATINLE-------EEGVEQFGVEKVSEFSWKDIFDADACTSCKRC 298 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP++ ++ L P ++Q L + L L+ C T C + Sbjct: 299 QDRCPAHNT--EKPLSPMKVVQQVGELAFGNPDKS---LIETVGNDALWSCTTCRACQEI 353 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP + I +++ L+ Sbjct: 354 CPADVEHVNKIIEMRRNLV 372 >gi|168698591|ref|ZP_02730868.1| hypothetical protein GobsU_03659 [Gemmata obscuriglobus UQM 2246] Length = 482 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P SH R + + +CV C C+ SCP+Y ++ P + R +ID Sbjct: 38 PPHGHGTGSHGPRVDYELVLDCVHCGLCTASCPTYMETANEADSPRGRIYLMRGVIDGTL 97 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +L+ C C +CP G+ + I + + + Sbjct: 98 ALDSDVKQHLD------LCLNCRACETACPSGVQYGRLIEPFREFMNE 139 >gi|330815599|ref|YP_004359304.1| hypothetical protein bgla_1g06560 [Burkholderia gladioli BSR3] gi|327367992|gb|AEA59348.1| hypothetical protein bgla_1g06560 [Burkholderia gladioli BSR3] Length = 408 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTKLADFIRDTPDGAEAESILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + L RC T +C +CP G+ + + + L R Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCESTCPSGVQYGRLVEIGRQQLETR 105 >gi|186470443|ref|YP_001861761.1| hypothetical protein Bphy_5641 [Burkholderia phymatum STM815] gi|184196752|gb|ACC74715.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phymatum STM815] Length = 423 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L CV C C+ +CP+Y + GP + + L++ Sbjct: 2 QTNLDSHAKALPDAEEAESILRSCVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQLLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L L RC T NC +CP G+ + + I L+R+I Sbjct: 62 EPVSARTQL-------HLDRCLTCRNCETTCPSGVTYHRLL-DIGRAELERRI 106 >gi|197119204|ref|YP_002139631.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] gi|197088564|gb|ACH39835.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] Length = 714 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 12/139 (8%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + DL S + S + I C C C Sbjct: 246 PANYLFTDLRPKGSIATINLE-------EEGVEQFGVEKVSEFSWKDIFDADACTSCKRC 298 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP++ ++ L P ++Q L + L L+ C T C + Sbjct: 299 QDRCPAHNT--EKPLSPMKVVQQVGELAFGDPDKS---LIETVGNDALWSCTTCRACQEI 353 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP + I +++ L+ Sbjct: 354 CPADVEHVNKIIEMRRNLV 372 >gi|238026282|ref|YP_002910513.1| glycolate oxidase iron-sulfur subunit [Burkholderia glumae BGR1] gi|237875476|gb|ACR27809.1| Hypothetical protein bglu_1g06150 [Burkholderia glumae BGR1] Length = 408 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + + Sbjct: 2 QTNLADFIRGTPDGDEAESILRKCVHCGFCTATCPTYQLLGDELDGPRGRIY---LIKQT 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L RC T +C +CP G+ + + +I +D ++ Sbjct: 59 LEGAPVTR----STQQHLDRCLTCRSCESTCPSGVQYGRLV-EIGRQQVDARV 106 >gi|91978596|ref|YP_571255.1| protein of unknown function DUF224, cysteine-rich region [Rhodopseudomonas palustris BisB5] gi|91685052|gb|ABE41354.1| protein of unknown function DUF224, cysteine-rich region [Rhodopseudomonas palustris BisB5] Length = 437 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 KTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + + C +CP G+N + + + + Sbjct: 62 NAPPTADVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARARI 103 >gi|186470751|ref|YP_001862069.1| hypothetical protein Bphy_5959 [Burkholderia phymatum STM815] gi|184197060|gb|ACC75023.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phymatum STM815] Length = 720 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 31/247 (12%) Query: 36 NPDNKGNPCMDTYYVDLDNCGPMVLDGL-------LYIKNKIDPTLTL--RRSCREGICG 86 +PD + D +VL G+ L + D + R Sbjct: 172 DPDYDRSGYR---REDWAFLWSLVLIGITGFVLSGLRLVWLQDRAVVWDTRWWSPVAALL 228 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI------AVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 + M G + A + + +P+ V S + + Sbjct: 229 AEIMRGAGLSAPAAYVLRTGLWWVHGALALTFIALIPYTKVKHIFTASGSLLMRDPLAAQ 288 Query: 141 PWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 K + P + + + L C C C +CP+ L P ++ + Sbjct: 289 RLPKVEADAPRAGYKTITDFTWKHLLNLDACTKCGRCHEACPARAV--GAPLSPRDVILS 346 Query: 200 YR-WLIDSRDEFQ--GERLDNLEDP-------FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 R + ++ ++ E ++ ++ C T M C + CP + I + Sbjct: 347 LREFANEALEKNTLPDEVKLDVHGKDIGQVFMETVWSCRTCMACVEICPVAVEHVPIIVQ 406 Query: 250 IKMMLLD 256 ++ L++ Sbjct: 407 LRRNLVE 413 >gi|326906092|gb|EGE53025.1| LOW QUALITY PROTEIN: iron-sulfur-binding reductase [Mycobacterium tuberculosis W-148] Length = 709 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|306970536|ref|ZP_07483197.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu010] gi|307078264|ref|ZP_07487434.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu011] gi|308359843|gb|EFP48694.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu010] gi|308363743|gb|EFP52594.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu011] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|306774432|ref|ZP_07412769.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu001] gi|308216937|gb|EFO76336.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu001] Length = 866 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|298523815|ref|ZP_07011224.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298493609|gb|EFI28903.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 722 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|289748107|ref|ZP_06507485.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis 02_1987] gi|289688635|gb|EFD56123.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis 02_1987] Length = 772 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 120 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 179 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 180 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 239 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 240 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 299 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 300 DHIVDMRRYQV 310 >gi|260203488|ref|ZP_05770979.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis K85] gi|289572924|ref|ZP_06453151.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis K85] gi|289537355|gb|EFD41933.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis K85] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|253797264|ref|YP_003030265.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 1435] gi|289552590|ref|ZP_06441800.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 605] gi|297632823|ref|ZP_06950603.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 4207] gi|297729798|ref|ZP_06958916.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN R506] gi|313657127|ref|ZP_07814007.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN V2475] gi|253318767|gb|ACT23370.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 1435] gi|289437222|gb|EFD19715.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 605] gi|328457051|gb|AEB02474.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis KZN 4207] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|218751968|ref|ZP_03530764.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis GM 1503] gi|289760448|ref|ZP_06519826.1| Fe-S oxidoreductase [Mycobacterium tuberculosis GM 1503] gi|289707954|gb|EFD71970.1| Fe-S oxidoreductase [Mycobacterium tuberculosis GM 1503] Length = 753 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|215406341|ref|ZP_03418522.1| aminotransferase AlaT [Mycobacterium tuberculosis 02_1987] Length = 788 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 136 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 195 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 196 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 255 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 256 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 315 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 316 DHIVDMRRYQV 326 >gi|254363306|ref|ZP_04979352.1| hypothetical iron-sulfur-binding reductase [Mycobacterium tuberculosis str. Haarlem] gi|134148820|gb|EBA40865.1| hypothetical iron-sulfur-binding reductase [Mycobacterium tuberculosis str. Haarlem] Length = 805 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 153 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 212 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 213 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 272 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 273 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 332 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 333 DHIVDMRRYQV 343 >gi|15839724|ref|NP_334761.1| ferredoxin, 4Fe-4S [Mycobacterium tuberculosis CDC1551] gi|13879849|gb|AAK44575.1| ferredoxin, 4Fe-4S [Mycobacterium tuberculosis CDC1551] gi|323721247|gb|EGB30305.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis CDC1551A] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|15607479|ref|NP_214852.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis H37Rv] gi|148660104|ref|YP_001281627.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis H37Ra] gi|167967424|ref|ZP_02549701.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis H37Ra] gi|307082821|ref|ZP_07491934.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu012] gi|2276335|emb|CAB10793.1| PROBABLE IRON-SULFUR-BINDING REDUCTASE [Mycobacterium tuberculosis H37Rv] gi|148504256|gb|ABQ72065.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis H37Ra] gi|308367415|gb|EFP56266.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu012] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|31791516|ref|NP_854009.1| putative iron-sulfur-binding reductase [Mycobacterium bovis AF2122/97] gi|121636252|ref|YP_976475.1| putative iron-sulfur-binding reductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148821534|ref|YP_001286288.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis F11] gi|215429159|ref|ZP_03427078.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis EAS054] gi|215444423|ref|ZP_03431175.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T85] gi|219556147|ref|ZP_03535223.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T17] gi|224988724|ref|YP_002643411.1| putative iron-sulfur-binding reductase [Mycobacterium bovis BCG str. Tokyo 172] gi|254549281|ref|ZP_05139728.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185209|ref|ZP_05762683.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis CPHL_A] gi|260199337|ref|ZP_05766828.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis T46] gi|289441718|ref|ZP_06431462.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T46] gi|289445877|ref|ZP_06435621.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis CPHL_A] gi|289568248|ref|ZP_06448475.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T17] gi|289752368|ref|ZP_06511746.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis EAS054] gi|289756403|ref|ZP_06515781.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T85] gi|294995095|ref|ZP_06800786.1| putative iron-sulfur-binding reductase [Mycobacterium tuberculosis 210] gi|306779178|ref|ZP_07417515.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu002] gi|306782965|ref|ZP_07421287.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu003] gi|306787333|ref|ZP_07425655.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu004] gi|306791886|ref|ZP_07430188.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu005] gi|306796072|ref|ZP_07434374.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu006] gi|306801932|ref|ZP_07438600.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu008] gi|306806143|ref|ZP_07442811.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu007] gi|306966341|ref|ZP_07479002.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu009] gi|31617102|emb|CAD93209.1| PUTATIVE IRON-SULFUR-BINDING REDUCTASE [Mycobacterium bovis AF2122/97] gi|121491899|emb|CAL70362.1| Putative iron-sulfur-binding reductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148720061|gb|ABR04686.1| hypothetical iron-sulfur-binding reductase [Mycobacterium tuberculosis F11] gi|224771837|dbj|BAH24643.1| putative iron-sulfur-binding reductase [Mycobacterium bovis BCG str. Tokyo 172] gi|289414637|gb|EFD11877.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T46] gi|289418835|gb|EFD16036.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis CPHL_A] gi|289542001|gb|EFD45650.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T17] gi|289692955|gb|EFD60384.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis EAS054] gi|289711967|gb|EFD75979.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis T85] gi|308327829|gb|EFP16680.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu002] gi|308332183|gb|EFP21034.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu003] gi|308335968|gb|EFP24819.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu004] gi|308339543|gb|EFP28394.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu005] gi|308343449|gb|EFP32300.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu006] gi|308347340|gb|EFP36191.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu007] gi|308351283|gb|EFP40134.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu008] gi|308355885|gb|EFP44736.1| iron-sulfur-binding reductase [Mycobacterium tuberculosis SUMu009] Length = 882 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 46/191 (24%), Gaps = 42/191 (21%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P K L + +P + A ED Sbjct: 230 HSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKIEDFTWKGM 289 Query: 167 --LYECVMCACCSTSCPSYWW--------------------------NSDRYLGPAILLQ 198 C C C + CP++ D G Q Sbjct: 290 LDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDASAGGEAGHQ 349 Query: 199 AYRWLIDS--------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + +S R E + DP L+ C T C + CP + Sbjct: 350 EHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHV 409 Query: 245 KAIAKIKMMLL 255 I ++ + Sbjct: 410 DHIVDMRRYQV 420 >gi|38234682|ref|NP_940449.1| hypothetical protein DIP2133 [Corynebacterium diphtheriae NCTC 13129] gi|38200946|emb|CAE50663.1| Putative conserved membrane protein [Corynebacterium diphtheriae] Length = 834 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 159 EDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI--------DSRD 208 ED L C C C CP+ WN+++ L P +L+ R DS D Sbjct: 283 EDAPWKMLLDVSTCTECGRCQEQCPA--WNTEKPLSPKMLVTDLRDAAIEYFDSSHDSVD 340 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L+ C C + CP + ++ ++ Sbjct: 341 VLALAGNSGVISDDVLWSCTNCGACVEQCPVDIEHIDHVSNMRR 384 >gi|330961974|gb|EGH62234.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 653 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI---------------- 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSQ 293 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + GE ++ L D L+ C T C + CP + AI ++ L Sbjct: 294 DGKGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 353 Query: 257 RK 258 K Sbjct: 354 EK 355 >gi|222106778|ref|YP_002547569.1| glycolate oxidase iron-sulfur subunit [Agrobacterium vitis S4] gi|221737957|gb|ACM38853.1| glycolate oxidase iron-sulfur subunit [Agrobacterium vitis S4] Length = 431 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 L + + L CV C C+ +CP+Y + P + + ++++ Sbjct: 1 MAQLADPKTAEAERILRRCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRAAD 60 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + +++ RC + + CT +CP G++ + + + Sbjct: 61 EEIVTHID------RCLSCLACTTTCPSGVDYMHLVDHARNHI 97 >gi|170724053|ref|YP_001751741.1| hypothetical protein PputW619_4896 [Pseudomonas putida W619] gi|169762056|gb|ACA75372.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudomonas putida W619] Length = 650 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 21/117 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + + + Sbjct: 236 WNQLLGFDACVQCGKCEAVCPAFAA--GQPLNPKKLIQDMVIGLAGGTDAKFAGSPYPGK 293 Query: 212 ----------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 294 PIGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|324997595|ref|ZP_08118707.1| iron-sulphur-binding reductase [Pseudonocardia sp. P1] Length = 700 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 44/155 (28%), Gaps = 45/155 (29%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P + ED C C C + CP+ WN+++ L P +L+ A R Sbjct: 214 EEADPDEDTFGVGRVEDFTWKGLLDFTTCTECGRCQSQCPA--WNTEKPLSPKLLVNALR 271 Query: 202 WLID----------SRDEFQGE----------RLDN---------------------LED 220 S D E RL + D Sbjct: 272 DHAYDKAPYLLAGGSTDMAGDEVGITGDDAEARLAAIPEAARKEAERPLIGGEDVLGVID 331 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 P L+ C C + CP + I ++ + Sbjct: 332 PDILWSCTMCGACVEQCPVDIEHVDHIVDMRRYQV 366 >gi|183221188|ref|YP_001839184.1| putative CoB--CoM heterodisulfide reductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911279|ref|YP_001962834.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775955|gb|ABZ94256.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779610|gb|ABZ97908.1| Putative CoB--CoM heterodisulfide reductase; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 700 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 26/142 (18%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + + A ED + L C+ C C CP+ + L P Sbjct: 261 KGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGRCQVECPANRT--GKVLNPKA 318 Query: 196 L-LQAYRWLIDSRDEFQGERLDN----------------LEDPFRL-----YRCHTIMNC 233 + ++ +++ E R + L + C T C Sbjct: 319 IIVELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINSHEGLSEEALWGCTTCYAC 378 Query: 234 TQSCPKGLNPAKAIAKIKMMLL 255 ++CP G N AI +++ L+ Sbjct: 379 VEACPVGNNQVNAIIEMRRHLV 400 Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 22/63 (34%) Query: 217 NLEDPFRLY-----------------RCHTIMNCTQSCPKG-----LNPAKAIAKIKMML 254 NL+D ++ C C CP LNP I ++K + Sbjct: 268 NLDDENAVWGSNRVEDFPWPNLLDGMSCIECGRCQVECPANRTGKVLNPKAIIVELKHQM 327 Query: 255 LDR 257 L++ Sbjct: 328 LEK 330 >gi|313672309|ref|YP_004050420.1| hypothetical protein Calni_0344 [Calditerrivibrio nitroreducens DSM 19672] gi|312939065|gb|ADR18257.1| protein of unknown function DUF224 cysteine-rich region domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 658 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP+Y + P ++ L D L Sbjct: 282 WKDIFDTDACTKCKRCQDRCPAYASDK-----PLSPMKLINKLNDIAFGKADANLIEEIT 336 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T NC + CP + I ++ L+ Sbjct: 337 KDTLWSCTTCGNCQEICPAEIEHVNKILNMRRNLV 371 >gi|126178575|ref|YP_001046540.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanoculleus marisnigri JR1] gi|125861369|gb|ABN56558.1| CoB--CoM heterodisulfide reductase subunit C [Methanoculleus marisnigri JR1] Length = 193 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 20/141 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M+V KD + R + ++ +P+ ++ + C C C+ Sbjct: 1 MAVKKD--YKDQKLAEKLRDRKYYIPDSNPEF-----IKEVEKIGQTAAHMCYQCGTCTG 53 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SCPS P + ++ R G + L DP L+ C T +CT CP Sbjct: 54 SCPSA---------PRSSYRIRLFM---RKAILGLEEEILTDPD-LWLCTTCYSCTDRCP 100 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 + L P AI ++ + R I Sbjct: 101 RDLAPTDAIMAMRNLAARRDI 121 >gi|325518072|gb|EGC97871.1| putative iron-sulfur cluster membrane protein [Burkholderia sp. TJI49] Length = 641 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|307596078|ref|YP_003902395.1| hypothetical protein Vdis_1972 [Vulcanisaeta distributa DSM 14429] gi|307551279|gb|ADN51344.1| protein of unknown function DUF224 cysteine-rich region domain protein [Vulcanisaeta distributa DSM 14429] Length = 678 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 6/91 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRL 224 C C C +CP+Y P + + +L D L Sbjct: 292 EAMACTNCFRCQDACPAYAAG-----RPLSPMMIVTKIKHGLYNNNENKLIDGSIADDEL 346 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C +CP + I ++ L+ Sbjct: 347 WACTTCGACMNTCPVYIRHVDYILDMRRYLV 377 >gi|206564158|ref|YP_002234921.1| putative iron-sulfur cluster membrane protein [Burkholderia cenocepacia J2315] gi|198040198|emb|CAR56181.1| putative iron-sulfur cluster membrane protein [Burkholderia cenocepacia J2315] Length = 641 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|78061425|ref|YP_371333.1| hypothetical protein Bcep18194_B0575 [Burkholderia sp. 383] gi|77969310|gb|ABB10689.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 641 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAY--------RWL 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPSPGLAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|257057803|ref|YP_003135635.1| Fe-S oxidoreductase [Saccharomonospora viridis DSM 43017] gi|256587675|gb|ACU98808.1| Fe-S oxidoreductase [Saccharomonospora viridis DSM 43017] Length = 762 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 42/153 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ ED C C C + CP+ WN+ + L P +++ Sbjct: 270 FEEADPEKDVFGAGRIEDFTWKGWLDFSTCTECGRCQSQCPA--WNTGKPLSPKLVITQL 327 Query: 201 R---------WLIDSRDEFQGERL-----------------------------DNLEDPF 222 R L + + GE + + + DP Sbjct: 328 RDHAYAKAPYLLAGGKKDVTGEEVGLTGDNPYAGIDVLALAEAERPLVGTGDENGVIDPD 387 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + I ++ + Sbjct: 388 VLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 420 >gi|325283431|ref|YP_004255972.1| hypothetical protein Deipr_1204 [Deinococcus proteolyticus MRP] gi|324315240|gb|ADY26355.1| protein of unknown function DUF224 cysteine-rich region domain protein [Deinococcus proteolyticus MRP] Length = 1143 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 20/134 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 IE ++ PK + L+ E ++ Y C+ C C CP+ + L PA L Sbjct: 267 IEEAMEQEEPKLGAQKLEDLE-WPRLLDAYACIQCNRCQDVCPANAT--GKALSPAALEI 323 Query: 199 AYRWLIDSR---------------DEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGL 241 R ++ D R L+ ++ C T C Q CP Sbjct: 324 NKRMELNMLGTHASPFTLKKAAFEDGASTARPLLEYAISEEAVWGCTTCGACMQVCPVQD 383 Query: 242 NPAKAIAKIKMMLL 255 I I+ L+ Sbjct: 384 EQMLDIVDIRRNLV 397 >gi|39934207|ref|NP_946483.1| glycolate oxidase subunit (Fe-S)protein GlcF [Rhodopseudomonas palustris CGA009] gi|192289733|ref|YP_001990338.1| hypothetical protein Rpal_1323 [Rhodopseudomonas palustris TIE-1] gi|39648055|emb|CAE26575.1| glycolate oxidase subunit, (Fe-S)protein, GlcF [Rhodopseudomonas palustris CGA009] gi|192283482|gb|ACE99862.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodopseudomonas palustris TIE-1] Length = 437 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + L CV C C+ +CP+Y D P + + +++S Sbjct: 2 KTDFSLTQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + +++ RC + + C +CP G+N + + ++ + + Sbjct: 62 DKPPTADVVKHID------RCLSCLACMTTCPSGVNYMHLVDQARVRIEKQ 106 >gi|78222739|ref|YP_384486.1| hypothetical protein Gmet_1527 [Geobacter metallireducens GS-15] gi|78193994|gb|ABB31761.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 654 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ + + C+ C C CP+ ++L P ++ + + + L Sbjct: 281 RKNLLDISTCLKCGRCHEVCPAAQT--GKHLSPKGVMVTLAEYLQ-EGKMHDDSLLETIS 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C T C ++CP +N AI ++ LL + Sbjct: 338 TDAIYSCTTCAACMEACPVSVNQPNAILGMRQHLLMER 375 >gi|91783594|ref|YP_558800.1| glycolate oxidase iron-sulfur subunit [Burkholderia xenovorans LB400] gi|91687548|gb|ABE30748.1| Putative glycolate oxidase iron-sulfur subunit, GlcF [Burkholderia xenovorans LB400] Length = 413 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y + GP + + +++ Q +L Sbjct: 19 EQILRACVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQMLEGEPVTQKTQL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC + NC +CP G+ A+ I L+R+I Sbjct: 72 LDRCLSCRNCETTCPSGVTY-HALLDIGRAELERRI 106 >gi|89070702|ref|ZP_01157971.1| glycolate oxidase, iron-sulfur subunit [Oceanicola granulosus HTCC2516] gi|89043723|gb|EAR49927.1| glycolate oxidase, iron-sulfur subunit [Oceanicola granulosus HTCC2516] Length = 460 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L + + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQLADPDTARANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLMK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER+ + + RC + + C +CP G++ + + + + Sbjct: 57 -DMLENERVPDDRTVTHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEE 105 >gi|330812250|ref|YP_004356712.1| iron-binding membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380358|gb|AEA71708.1| putative iron-binding membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 649 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 21/117 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C +CP++ + L P L+Q + + + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGK 293 Query: 212 ----------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 294 PVGEHSGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|171184899|ref|YP_001793818.1| ferredoxin [Thermoproteus neutrophilus V24Sta] gi|170934111|gb|ACB39372.1| ferredoxin [Thermoproteus neutrophilus V24Sta] Length = 100 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 5/102 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + R +G TY V+ VLD LL I+ +D +L++R +CR G+CG+ Sbjct: 3 VKVHVKRGR---EGAQYYQTYEVEAPES-TTVLDLLLSIRETLDGSLSMRYACRMGVCGA 58 Query: 88 CGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 C M I+G LAC VK I V PL VIKDLV + Sbjct: 59 CTMVINGVPRLACAVKISDLKTDEIFVEPLRGKKVIKDLVTE 100 >gi|317478249|ref|ZP_07937414.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_1_36] gi|316905556|gb|EFV27345.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_1_36] Length = 94 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 7/97 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPF 222 C+ C C +C N L + + L + E L D Sbjct: 1 MDAASCIGCGACVAACK----NGSAMLFVSAKVSQLNLLPQGKPEALRRAKAMLSKMDEL 56 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CPK ++ + IA++ + K+ Sbjct: 57 GFGNCTNTRACEAECPKNVSISN-IARLNRDFIIAKL 92 >gi|284993162|ref|YP_003411717.1| hypothetical protein Gobs_4809 [Geodermatophilus obscurus DSM 43160] gi|284066408|gb|ADB77346.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geodermatophilus obscurus DSM 43160] Length = 762 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 49/184 (26%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG--LYECVMCACC 176 D V + + +P + A ED C C C Sbjct: 245 FKRHDDGSVALGPLQAMTSGGKPIDFEDPDEDAIFGRGKIEDFTWKGMLDFTTCTECGRC 304 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLI-------------------------------- 204 + CP+ WN+ + L P +++ R + Sbjct: 305 QSQCPA--WNTGKPLSPKMVVMDLRDHLYAKAPYLLGEKTASETAPDYDVLKPSDEQVWA 362 Query: 205 ------DSRDEFQGER-----LDN--LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ++ Q R L+ + DP L+ C C + CP + I ++ Sbjct: 363 SGYARIEGTNDAQAHRPLVGTLEEGGVIDPDVLWSCTNCGACVEQCPVDIEHIDHIEDMR 422 Query: 252 MMLL 255 + Sbjct: 423 RYQV 426 >gi|294496434|ref|YP_003542927.1| CoB--CoM heterodisulfide reductase subunit C [Methanohalophilus mahii DSM 5219] gi|292667433|gb|ADE37282.1| CoB--CoM heterodisulfide reductase subunit C [Methanohalophilus mahii DSM 5219] Length = 161 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 15/104 (14%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S E+ + + +C+ C CS SCPS G L R + + R Sbjct: 5 PSIEEVIEDFNVLKCMQCGVCSGSCPS---------GRQASLNVRRLV------RKIGRD 49 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ C T NC + CP+G+ AI ++ + + Sbjct: 50 HAAISDESLWMCTTCYNCQERCPRGIAIVDAILAVRSIAAHEGL 93 >gi|237802319|ref|ZP_04590780.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025176|gb|EGI05232.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 653 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 24/127 (18%) Query: 156 QSHEDRQKID--GLYECVMCACCSTSCPSYWWNS--------DRYLGPAILLQAYRW--- 202 + ED G CV C C +CP++ + ++ Sbjct: 229 EKPEDFTWNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGS 288 Query: 203 ---LIDSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D + G+ ++ L D L+ C T C + CP + AI ++ Sbjct: 289 PYPSLDGHGKPLGKHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMR 348 Query: 252 MMLLDRK 258 L K Sbjct: 349 RYLTLEK 355 >gi|119358285|ref|YP_912929.1| hypothetical protein Cpha266_2517 [Chlorobium phaeobacteroides DSM 266] gi|119355634|gb|ABL66505.1| protein of unknown function DUF224, cysteine-rich region domain protein [Chlorobium phaeobacteroides DSM 266] Length = 662 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 5/94 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C C C CP+Y P + R L + + L Sbjct: 283 WKDLFDTDACTSCKRCQDRCPAYQTGK-----PLSPMTIIRQLGELAEISPKSDLIKSVT 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ C T C CP + I ++ L Sbjct: 338 SEALWACTTCGACEDICPANIEHVSKIIGMRRHL 371 >gi|325273166|ref|ZP_08139459.1| iron-sulfur cluster-binding protein [Pseudomonas sp. TJI-51] gi|324101699|gb|EGB99252.1| iron-sulfur cluster-binding protein [Pseudomonas sp. TJI-51] Length = 650 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGSPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|326403036|ref|YP_004283117.1| hypothetical protein ACMV_08880 [Acidiphilium multivorum AIU301] gi|325049897|dbj|BAJ80235.1| hypothetical protein ACMV_08880 [Acidiphilium multivorum AIU301] Length = 615 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 14/106 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-----------AYRWLIDSRD 208 ++ G C+ C C +CP++ L P L+Q AY Sbjct: 223 AWNRLAGFDACIQCGRCEEACPAFAAGQK--LNPKALIQDLATALHPEAPAYAGSPHPGI 280 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 G L L L+ C T C +CP + A+ ++ L Sbjct: 281 SSPGPVLGRLH-AETLFACTTCRACVSACPMMIEHVDAVVDLRRHL 325 >gi|148260008|ref|YP_001234135.1| hypothetical protein Acry_0999 [Acidiphilium cryptum JF-5] gi|146401689|gb|ABQ30216.1| protein of unknown function DUF224, cysteine-rich region domain protein [Acidiphilium cryptum JF-5] Length = 615 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 14/106 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-----------AYRWLIDSRD 208 ++ G C+ C C +CP++ L P L+Q AY Sbjct: 223 AWNRLAGFDACIQCGRCEEACPAFAAGQK--LNPKALIQDLATALHPEAPAYAGSPHPGI 280 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 G L L L+ C T C +CP + A+ ++ L Sbjct: 281 SSPGPVLGRLH-AETLFACTTCRACVSACPMMIEHVDAVVDLRRHL 325 >gi|170737563|ref|YP_001778823.1| hypothetical protein Bcenmc03_5204 [Burkholderia cenocepacia MC0-3] gi|169819751|gb|ACA94333.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia cenocepacia MC0-3] Length = 641 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGSDAAYAGSPSPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|254250001|ref|ZP_04943321.1| Fe-S oxidoreductase [Burkholderia cenocepacia PC184] gi|124876502|gb|EAY66492.1| Fe-S oxidoreductase [Burkholderia cenocepacia PC184] Length = 641 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGSDAAYAGSPSPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|107025644|ref|YP_623155.1| protein of unknown function DUF224, cysteine-rich region [Burkholderia cenocepacia AU 1054] gi|116693174|ref|YP_838707.1| hypothetical protein Bcen2424_5081 [Burkholderia cenocepacia HI2424] gi|105895018|gb|ABF78182.1| protein of unknown function DUF224, cysteine-rich region [Burkholderia cenocepacia AU 1054] gi|116651174|gb|ABK11814.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia cenocepacia HI2424] Length = 641 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGSDAAYAGSPSPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|53804408|ref|YP_113956.1| glycolate oxidase iron-sulfur subunit [Methylococcus capsulatus str. Bath] gi|53758169|gb|AAU92460.1| glycolate oxidase, iron-sulfur subunit [Methylococcus capsulatus str. Bath] Length = 402 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E L CV C C+ +CP+Y D GP + + +++ + R Sbjct: 13 PEGEGAEAILDACVHCGFCTAACPTYRLLGDERDGPRGRIYLIKAMLEGEPVTERTR--- 69 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L RC C +CP G+ + A I +++ + Sbjct: 70 ----SHLDRCLGCRACESACPSGVRYGRL-ADIARGIIEER 105 >gi|307546049|ref|YP_003898528.1| iron-sulfur cluster-binding protein [Halomonas elongata DSM 2581] gi|307218073|emb|CBV43343.1| iron-sulfur cluster-binding protein [Halomonas elongata DSM 2581] Length = 664 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 33/115 (28%), Gaps = 21/115 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAI---LLQAYRWLID--- 205 ++ G CV C C CP++ D +G A A D Sbjct: 245 WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLIQDMVVGMAGGSDAQYAGSPYPDRPV 304 Query: 206 ------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L D L+ C T C + CP + AI ++ L Sbjct: 305 GEHQGSPHGPIVAREGKALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRFL 359 >gi|226356366|ref|YP_002786106.1| glycolate oxidase iron-sulfur subunit [Deinococcus deserti VCD115] gi|226318356|gb|ACO46352.1| putative Glycolate oxidase iron-sulfur subunit [Deinococcus deserti VCD115] Length = 425 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 G+ CV C C +CP+Y D P + + ++ ER LED Sbjct: 17 MAHGVDACVHCGFCLPACPTYTLLGDEMDSPRGRIVLMKEVL--------ERALPLEDAA 68 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L RC + C +CP G+ + I + Sbjct: 69 PHLDRCLGCLGCVSACPSGVPYGELITAFR 98 >gi|330876617|gb|EGH10766.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 410 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + L CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTTLSEHARTQPRAEEAERILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + +L L RC + NC +CP G++ + I +D + Sbjct: 62 QQVTETTQL-------HLDRCLSCRNCETTCPSGVDYHNLL-DIGRAAVDAVV 106 >gi|78065294|ref|YP_368063.1| glycolate oxidase iron-sulfur subunit [Burkholderia sp. 383] gi|77966039|gb|ABB07419.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 408 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|302531182|ref|ZP_07283524.1| iron-sulfur-binding reductase [Streptomyces sp. AA4] gi|302440077|gb|EFL11893.1| iron-sulfur-binding reductase [Streptomyces sp. AA4] Length = 763 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 40/150 (26%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P + ED C C C + CP+ WN+ + L P +L+ R Sbjct: 271 EEADPDEDTFGVGKIEDFSWKGWLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLITQLR 328 Query: 202 --------WLIDS--RDEFQGE-------------RLDN-------------LEDPFRLY 225 +L+ RD E L + DP L+ Sbjct: 329 DHAYAKAPYLLAGGKRDMAGDEIGLSGDNMYAGIDVLAIAESQKALVGDDGGVIDPDVLW 388 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + C + CP + I ++ + Sbjct: 389 SCTSCGACVEQCPVDIEHVDHIVDMRRYQV 418 >gi|213966358|ref|ZP_03394539.1| iron-sulphur-binding reductase [Corynebacterium amycolatum SK46] gi|213951007|gb|EEB62408.1| iron-sulphur-binding reductase [Corynebacterium amycolatum SK46] Length = 1119 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 27/115 (23%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQGER--- 214 C C C CP+ WN+ + L P +L+ R +L+ Sbjct: 316 DFTSCTECGRCQEQCPA--WNTSKPLSPKLLVNQLRDHAYASAPYLLAGETIETAREGEG 373 Query: 215 --------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + D L+ C C + CP + I ++ + Sbjct: 374 AGAALLTKPLVGDGDEGIIDQDVLWSCTNCGACVEQCPVDIEHIDHIVDMRRYQV 428 >gi|170751039|ref|YP_001757299.1| hypothetical protein Mrad2831_4650 [Methylobacterium radiotolerans JCM 2831] gi|170657561|gb|ACB26616.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium radiotolerans JCM 2831] Length = 446 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + + Sbjct: 62 GKPASQEVVKHVD------RCLSCLSCMTTCPSGVHYMHLVDHARAHIEE 105 >gi|295841397|dbj|BAJ07112.1| succinate dehydrogenase subunit B [Corynespora cassiicola] Length = 54 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/54 (61%), Positives = 41/54 (75%) Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 CPSYWWN + YLGPA+LLQ+YRW+ DSRDE +R D L + +YRC TI+NC Sbjct: 1 CPSYWWNQEEYLGPAVLLQSYRWIADSRDEKTAQRQDALNNSMSMYRCRTILNC 54 >gi|167572343|ref|ZP_02365217.1| iron-sulfur cluster binding protein [Burkholderia oklahomensis C6786] Length = 641 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GRHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|167565242|ref|ZP_02358158.1| iron-sulfur cluster binding protein [Burkholderia oklahomensis EO147] Length = 641 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GRHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|209548059|ref|YP_002279976.1| hypothetical protein Rleg2_0452 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533815|gb|ACI53750.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 436 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|82701473|ref|YP_411039.1| hypothetical protein Nmul_A0339 [Nitrosospira multiformis ATCC 25196] gi|82409538|gb|ABB73647.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 460 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 31/113 (27%), Gaps = 6/113 (5%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 P RQ D +CV C C CPSY P + Sbjct: 1 MKPDDLPSDVSSDPLLRLRRQISDEASQCVACGLCVPHCPSYRVTLSEADSPRGRIALMS 60 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + R R D RC T C CP + + I + M+ Sbjct: 61 GVAAGRIPMNA-RFALHMD-----RCLTCRACEAVCPNHVRFGELIDDAREMI 107 >gi|78060884|ref|YP_370792.1| glycolate oxidase iron-sulfur subunit [Burkholderia sp. 383] gi|77968769|gb|ABB10148.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 406 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + L++ E GER L R Sbjct: 22 LRACVHCGFCNATCPTYQVLGNELDGPRGRIYLIKQLLEG--EPCGER-----TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T NC +CP G+ + I ++++ Sbjct: 75 CLTCRNCETTCPSGVRYHTLL-DIGRAEAEKRV 106 >gi|83951232|ref|ZP_00959965.1| glycolate oxidase, iron-sulfur subunit [Roseovarius nubinhibens ISM] gi|83839131|gb|EAP78427.1| glycolate oxidase, iron-sulfur subunit [Roseovarius nubinhibens ISM] Length = 434 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L ++ D L CV C C+ +CP+Y D P + + Sbjct: 2 QTHFTETQLADPGTKRAKDILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + ER+ + + + RC + + C +CP G++ + + + R Sbjct: 57 -DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEQR 106 >gi|171319775|ref|ZP_02908861.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MEX-5] gi|171094977|gb|EDT40003.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MEX-5] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|163847692|ref|YP_001635736.1| hypothetical protein Caur_2135 [Chloroflexus aurantiacus J-10-fl] gi|222525552|ref|YP_002570023.1| hypothetical protein Chy400_2301 [Chloroflexus sp. Y-400-fl] gi|163668981|gb|ABY35347.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449431|gb|ACM53697.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus sp. Y-400-fl] Length = 466 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 5/100 (5%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D+ D + CV C C +SCP+Y P + + + + R E Sbjct: 23 KDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIYLMKAVDEGRISLASEVFQEQ 82 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP G+ + + + + Sbjct: 83 MS-----LCLNCRACEAVCPSGVQYGAILEASRAQIEQAR 117 >gi|320352516|ref|YP_004193855.1| hypothetical protein Despr_0382 [Desulfobulbus propionicus DSM 2032] gi|320121018|gb|ADW16564.1| protein of unknown function DUF162 [Desulfobulbus propionicus DSM 2032] Length = 713 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 7/143 (4%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP + + L +S + + +K + +C+ CA Sbjct: 252 LPRSATAQLLTSYVSIISGPTPNSDGSMKELHIILMDNHRSEMAADPLFKEAMQCIRCAS 311 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + G L DE L + ED L C C Sbjct: 312 CLNVCPIFRLVGGHVFGKVYTGGIGTILTAWHDE-----LKSSEDIQGL--CIQCGACKD 364 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 CP ++ I +I+ L+ + Sbjct: 365 VCPGKIDIPGLIMEIRRRLVKEQ 387 >gi|111022440|ref|YP_705412.1| Fe-S reductase [Rhodococcus jostii RHA1] gi|110821970|gb|ABG97254.1| possible Fe-S reductase [Rhodococcus jostii RHA1] Length = 1078 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ P + ED C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MEDADPDTDTFGAGNIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLITSL 326 Query: 201 R---------WLIDSR-----------------DEFQ-----------GER--------- 214 R L R DE + ER Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEIGLVDGDGAVDEAKLAAIPEAARREAERKLVGETVDG 386 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + D L+ C C + CP + I ++ + Sbjct: 387 ELAPVIDAETLWSCTNCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|313496676|gb|ADR58042.1| Iron-sulfur cluster-binding protein [Pseudomonas putida BIRD-1] Length = 650 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|167031352|ref|YP_001666583.1| hypothetical protein PputGB1_0334 [Pseudomonas putida GB-1] gi|166857840|gb|ABY96247.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudomonas putida GB-1] Length = 650 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|26987053|ref|NP_742478.1| iron-sulfur cluster-binding protein [Pseudomonas putida KT2440] gi|24981675|gb|AAN65942.1|AE016222_4 iron-sulfur cluster-binding protein [Pseudomonas putida KT2440] Length = 650 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|148545587|ref|YP_001265689.1| hypothetical protein Pput_0332 [Pseudomonas putida F1] gi|148509645|gb|ABQ76505.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pseudomonas putida F1] Length = 650 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|73668184|ref|YP_304199.1| CoB--CoM heterodisulfide reductase subunit C [Methanosarcina barkeri str. Fusaro] gi|72395346|gb|AAZ69619.1| CoB--CoM heterodisulfide reductase subunit C [Methanosarcina barkeri str. Fusaro] Length = 161 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 14/93 (15%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L+ C+ C C+ SCPS G L R L D+R + L+ Sbjct: 15 DLFSCMQCGICTGSCPS---------GRHTGLNTRRILRDARKNR-----ATVLSDDALW 60 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + A+ +++ + + + Sbjct: 61 LCTTCYTCQERCPRDIPITDALLELRRLAVKQG 93 >gi|110678006|ref|YP_681013.1| glycolate oxidase, iron-sulfur subunit [Roseobacter denitrificans OCh 114] gi|109454122|gb|ABG30327.1| glycolate oxidase, iron-sulfur subunit [Roseobacter denitrificans OCh 114] Length = 441 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E +++ E ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQMKNPEIQRSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + +R + + + RC + + C +CP G++ + + + +R Sbjct: 57 -DMLENDRDPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEER 106 >gi|115350676|ref|YP_772515.1| glycolate oxidase iron-sulfur subunit [Burkholderia ambifaria AMMD] gi|115280664|gb|ABI86181.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia ambifaria AMMD] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|163745352|ref|ZP_02152712.1| glycolate oxidase, iron-sulfur subunit [Oceanibulbus indolifex HEL-45] gi|161382170|gb|EDQ06579.1| glycolate oxidase, iron-sulfur subunit [Oceanibulbus indolifex HEL-45] Length = 442 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + ++ D L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTPEQLQDPDTQRSNDILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 -RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RD L + RC + + C +CP G++ + + + +R Sbjct: 62 DRDPDPKTVL-------HIDRCLSCLACMTTCPSGVHYMHLVDHARSYIEER 106 >gi|170702349|ref|ZP_02893242.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] gi|170132734|gb|EDT01169.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|77461443|ref|YP_350950.1| hypothetical protein Pfl01_5222 [Pseudomonas fluorescens Pf0-1] gi|77385446|gb|ABA76959.1| putative iron-binding membrane protein [Pseudomonas fluorescens Pf0-1] Length = 649 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 21/117 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 ++ G CV C C +CP++ + L P L+Q + + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDAQFAGSPYPGK 293 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 294 PVGEHSGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|221202248|ref|ZP_03575282.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans CGD2M] gi|221209163|ref|ZP_03582156.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans CGD2] gi|221170981|gb|EEE03435.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans CGD2] gi|221177822|gb|EEE10235.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans CGD2M] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 ---AKVTR----STQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|195970197|ref|NP_384885.2| glycolate oxidase IRON-sulfur subunit protein [Sinorhizobium meliloti 1021] gi|187904148|emb|CAC45351.2| Probable glycolate oxidase iron-sulfur subunit [Sinorhizobium meliloti 1021] Length = 443 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Q W + + E L + L +CV C C+ +CP+Y D Sbjct: 1 MIQRPQGATWSTRLQTNFSPEQLADPHVAESETILRKCVHCGFCTATCPTYVVLGDELDS 60 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P + + ++++ E + +++ RC + ++C +CP G++ + + Sbjct: 61 PRGRIYLIKDMLENGRAADSETVTHID------RCLSCLSCLTTCPSGVDYMHLVDHARA 114 Query: 253 MLLD 256 + Sbjct: 115 HIEK 118 >gi|172059709|ref|YP_001807361.1| glycolate oxidase iron-sulfur subunit [Burkholderia ambifaria MC40-6] gi|171992226|gb|ACB63145.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MC40-6] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|322420770|ref|YP_004199993.1| hypothetical protein GM18_3280 [Geobacter sp. M18] gi|320127157|gb|ADW14717.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 661 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + I C +C C CP++ + L P ++Q + + E R Sbjct: 282 AWKDIYDADACTLCKRCQDRCPAFAT--GKPLSPMKVVQQVGEMALANPEGDLCRY---V 336 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + I +++ L Sbjct: 337 TEQVLWDCTTCRACQEICPVDIEHVNKILEMRRNLA 372 >gi|288962979|ref|YP_003453273.1| 4Fe-4S ferredoxin [Azospirillum sp. B510] gi|288915245|dbj|BAI76729.1| 4Fe-4S ferredoxin [Azospirillum sp. B510] Length = 952 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 3/94 (3%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CPS+ + R D + + D + C Sbjct: 540 DTCIECGFCEPTCPSHRLTLSPRQRIVGRREMARLEAAGDDAPRLAEIAAAYDHQGIDTC 599 Query: 228 HTIMNCTQSCPKGLNPAKAIAKI---KMMLLDRK 258 C +CP G+ I + + + RK Sbjct: 600 AACGLCATACPVGIETGLLIKSMRGGRRGAVARK 633 >gi|167586212|ref|ZP_02378600.1| hypothetical protein BuboB_12788 [Burkholderia ubonensis Bu] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|186474495|ref|YP_001863466.1| hypothetical protein Bphy_7456 [Burkholderia phymatum STM815] gi|184198454|gb|ACC76416.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 261 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L CV C C+ +CP+Y + GP + + L++ Sbjct: 2 QTNLDSHAKALPDAAEAESILRSCVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQLLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L L RC T NC +CP G+ + + I L+R++ Sbjct: 62 EPVSDRTQL-------HLDRCLTCRNCETTCPSGVTYHRLL-DIGRAELERRV 106 >gi|294921744|ref|XP_002778711.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239887431|gb|EER10506.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 54 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 33/54 (61%) Query: 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLR 77 ++ +R+YR++P + P M + +DL CGPM+LD L+ IK+ D TL R Sbjct: 1 ASRMQTFRVYRYDPLTQDKPHMQEFNIDLAQCGPMILDALIKIKDTHDSTLAFR 54 >gi|289209470|ref|YP_003461536.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288945101|gb|ADC72800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 430 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 +CV C C CP+Y W+ P L + L R E Q RL L Sbjct: 33 ADQCVHCGLCLPHCPTYAWHQVEGDSPRGRLTLMQGLAQGRLEPQSSRLR-----EHLEG 87 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C +C CP + + + + +L + Sbjct: 88 CLGCRSCESVCPARVPFGALMDRAREVLAE 117 >gi|116250639|ref|YP_766477.1| glycolate oxidase iron-sulfur subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115255287|emb|CAK06362.1| putative glycolate oxidase iron-sulfur subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 436 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPTQLLDPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|161525823|ref|YP_001580835.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|189349456|ref|YP_001945084.1| glycolate oxidase iron-sulfur subunit [Burkholderia multivorans ATCC 17616] gi|160343252|gb|ABX16338.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia multivorans ATCC 17616] gi|189333478|dbj|BAG42548.1| (S)-2-hydroxy-acid oxidase [Burkholderia multivorans ATCC 17616] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 ---AKVTR----STQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|86356456|ref|YP_468348.1| glycolate oxidase subunit F protein [Rhizobium etli CFN 42] gi|86280558|gb|ABC89621.1| glycolate oxidase subunit F protein [Rhizobium etli CFN 42] Length = 436 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|260431766|ref|ZP_05785737.1| glycolate oxidase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415594|gb|EEX08853.1| glycolate oxidase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 440 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ L+ R+ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTEDQLKDPGTRRANEILRNCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + ER+ + + + RC + + C +CP G++ + + + +R Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYIENR 106 >gi|148553916|ref|YP_001261498.1| hypothetical protein Swit_0993 [Sphingomonas wittichii RW1] gi|148499106|gb|ABQ67360.1| protein of unknown function DUF224, cysteine-rich region domain protein [Sphingomonas wittichii RW1] Length = 431 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E L + +CV C C+ +CP+Y D P + + +++ Sbjct: 3 TDFSPEQLADPATAVAEAVIRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIQNMLEKE 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E + + +++ RC + ++C +CP G+N + + + R Sbjct: 63 AEPTPQVVRHVD------RCLSCLSCMTTCPSGVNYMHLVDHARAYIERR 106 >gi|78223277|ref|YP_385024.1| hypothetical protein Gmet_2070 [Geobacter metallireducens GS-15] gi|78194532|gb|ABB32299.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 663 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 5/117 (4%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + +++ + + I C C C CP++ D+ L P ++ Sbjct: 263 VTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRCQDRCPAHNT--DKPLSPMKVIN 320 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + + L L+ C T C + CP + I ++ ++ Sbjct: 321 QLGEVAGTNPDAN---LIETVSKDALWSCTTCRACQEICPASIEHVGKIVDMRRNMV 374 >gi|221214452|ref|ZP_03587423.1| glycolate oxidase, iron-sulfur subunit [Burkholderia multivorans CGD1] gi|221165709|gb|EED98184.1| glycolate oxidase, iron-sulfur subunit [Burkholderia multivorans CGD1] Length = 408 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 ---AKVTR----STQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|325673794|ref|ZP_08153484.1| Fe-S reductase [Rhodococcus equi ATCC 33707] gi|325555059|gb|EGD24731.1| Fe-S reductase [Rhodococcus equi ATCC 33707] Length = 1000 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 47/162 (29%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ V P ED C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MENVDPDTDTLGAGRVEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 326 Query: 201 R---------WLIDSR-----------------DEFQ-----------GER--------- 214 R L R DE ER Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEVGLVDAEGNADEAALAKIPEAARAEAERPLVGESVEG 386 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + DP L+ C T C + CP + I ++ + Sbjct: 387 ELGGIIDPETLWSCTTCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|312141364|ref|YP_004008700.1| iron-sulfur binding oxidoreductase [Rhodococcus equi 103S] gi|311890703|emb|CBH50022.1| secreted iron-sulfur binding oxidoreductase [Rhodococcus equi 103S] Length = 1065 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 47/162 (29%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ V P ED C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MENVDPDTDTLGAGRVEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 326 Query: 201 R---------WLIDSR-----------------DEFQ-----------GER--------- 214 R L R DE ER Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEVGLVDADGNADEAALAKIPEAARAEAERPLVGESVEG 386 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + DP L+ C T C + CP + I ++ + Sbjct: 387 ELGGIIDPETLWSCTTCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|198283479|ref|YP_002219800.1| hypothetical protein Lferr_1360 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248000|gb|ACH83593.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 416 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + + L++L+ R Sbjct: 22 LRSCVHCGFCTATCPTYQILGDELDGPRGRIYLIKEFLAGAP-ATEHTLEHLD------R 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C +CP G+ A+ A+I ++ ++ Sbjct: 75 CLTCRACETTCPSGVRYARL-AEIGRAHIEAEV 106 >gi|300790973|ref|YP_003771264.1| iron-sulfur-binding reductase [Amycolatopsis mediterranei U32] gi|299800487|gb|ADJ50862.1| iron-sulfur-binding reductase [Amycolatopsis mediterranei U32] Length = 737 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 40/150 (26%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + P + ED C C C CP+ WN+ + L P +++ R Sbjct: 271 EEADPDEDTFGVGKIEDFSWKGWLDFSTCTECGRCQEQCPA--WNTGKPLSPKLVITQLR 328 Query: 202 --------WLIDS--RDEFQGE-------------RLDN-------------LEDPFRLY 225 +L+ RD E L + DP L+ Sbjct: 329 DHAYAKAPYLLAGGKRDMAGDEVGLSGDNMYAGIDVLAIAESQKALIGDDGGVIDPDVLW 388 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + C + CP + I ++ + Sbjct: 389 SCTSCGACVEQCPVDIEHVDHIVDMRRYQV 418 >gi|170700995|ref|ZP_02891976.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] gi|170134092|gb|EDT02439.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria IOP40-10] Length = 406 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + +++ E GER L R Sbjct: 22 LRACVHCGFCNATCPTYQVLGNELDGPRGRIYLIKQMLEG--EPCGER-----TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T NC +CP G+ + + R Sbjct: 75 CLTCRNCETTCPSGVRYHTLLDIGRAEAEKRA 106 >gi|104784087|ref|YP_610585.1| iron-sulfur cluster-binding protein [Pseudomonas entomophila L48] gi|95113074|emb|CAK17802.1| putative iron-sulfur cluster-binding protein [Pseudomonas entomophila L48] Length = 650 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 21/117 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 ++ G CV C C CP++ + L P L+Q + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGK 293 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 294 PVGEHGGHPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|17548280|ref|NP_521620.1| hypothetical protein RS02034 [Ralstonia solanacearum GMI1000] gi|17430526|emb|CAD17210.1| putative alpha-helical ferredoxin; oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 641 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGSIVSGLIEAQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|149912675|ref|ZP_01901209.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. AzwK-3b] gi|149813081|gb|EDM72907.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. AzwK-3b] Length = 443 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E LQ + L CV C C+ +CP+Y D P + + Sbjct: 2 KTEFTAEQLQDPAIARSNQILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + ER+ + + + RC + + C +CP G++ + + + R Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARDYIEKR 106 >gi|253700752|ref|YP_003021941.1| hypothetical protein GM21_2131 [Geobacter sp. M21] gi|251775602|gb|ACT18183.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 663 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 20/159 (12%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP+ + L + F + + + + D L C C Sbjct: 215 LPYSKHMHILTAIPNVFLRTMGKSNTQPREEFSEGKSFGAATVDKLTWKDLLDSFSCTEC 274 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLI--------DSRDEFQGERLDNLEDPFR-- 223 C SCP+ + L P ++ A + + + + ER +L + Sbjct: 275 GRCQDSCPAAAT--GKALNPRQVIHAIKENLLQNGIVLEKLHGDAEAERCVSLIGEGKKG 332 Query: 224 ------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ C + C ++CP + I K++ L+ Sbjct: 333 TTQESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQ 371 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 225 YRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRKI 259 + C C SCP K LNP + I IK LL I Sbjct: 269 FSCTECGRCQDSCPAAATGKALNPRQVIHAIKENLLQNGI 308 >gi|307327371|ref|ZP_07606558.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces violaceusniger Tu 4113] gi|306887050|gb|EFN18049.1| protein of unknown function DUF224 cysteine-rich region domain protein [Streptomyces violaceusniger Tu 4113] Length = 775 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 50/207 (24%) Query: 97 TLACVKDMKDIKGAIAVYPLPH--MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 + ++ P+ D V + +P + A+ Sbjct: 225 MITVSTNLDMSIAWHRFLAFPNIWFKRNADGDVALGALQPMVSEGKPIDFEDPDEDAQFG 284 Query: 155 LQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------- 203 + E C C C + CP+ WN+ + L P +L+ A R Sbjct: 285 VSQIEHFSWKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMALRDHSHAKAPYLL 342 Query: 204 --------------IDSRDEFQGERLDNL---------------------EDPFRLYRCH 228 ++ ++ +L ++ DP L+ C Sbjct: 343 AGGGAVTSAAGAAGMEGEEKASEGQLADVPASALAEAERPLIGTLEENGVIDPDVLWSCT 402 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C + CP + I ++ + Sbjct: 403 TCGACVEQCPVDIEHVDHIVDMRRYQV 429 >gi|254462916|ref|ZP_05076332.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium HTCC2083] gi|206679505|gb|EDZ43992.1| glycolate oxidase, iron-sulfur subunit [Rhodobacteraceae bacterium HTCC2083] Length = 439 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +Q ++ L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 KTEFSDVQMQDPAIQRSNKILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLET 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R+ + + + RC + C +CP G++ I + + + Sbjct: 62 G------RVPDAKTVGHIDRCLGCLACMSTCPSGVHYMHLIDHARNYIEE 105 >gi|171185205|ref|YP_001794124.1| hypothetical protein Tneu_0739 [Thermoproteus neutrophilus V24Sta] gi|170934417|gb|ACB39678.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermoproteus neutrophilus V24Sta] Length = 639 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 7/93 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C C CP++ R L P + R + Sbjct: 269 YGIMFDACTRCGRCEEVCPAFVAK--RPLSPMGFVVKIA-----RARGGSDLFQEGISED 321 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C CP + I ++ L+ Sbjct: 322 EVWSCTTCGACVHQCPVYIRHIDYIVDMRRALV 354 >gi|107021808|ref|YP_620135.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia AU 1054] gi|116688755|ref|YP_834378.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia HI2424] gi|170732053|ref|YP_001764000.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia MC0-3] gi|254246273|ref|ZP_04939594.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|105891997|gb|ABF75162.1| protein of unknown function DUF224, cysteine-rich region [Burkholderia cenocepacia AU 1054] gi|116646844|gb|ABK07485.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia cenocepacia HI2424] gi|124871049|gb|EAY62765.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|169815295|gb|ACA89878.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia cenocepacia MC0-3] Length = 408 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 APVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|134292136|ref|YP_001115872.1| hypothetical protein Bcep1808_3419 [Burkholderia vietnamiensis G4] gi|134135293|gb|ABO56407.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia vietnamiensis G4] Length = 641 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPYPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEEQTLWSCTTCRACVQECPMLIEHVDAIVDLRR 353 >gi|297538590|ref|YP_003674359.1| hypothetical protein M301_1399 [Methylotenera sp. 301] gi|297257937|gb|ADI29782.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylotenera sp. 301] Length = 708 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 12/108 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L C C C +CP+ L P ++ + R + + + D Sbjct: 305 WKNLLHLDACTKCGRCQEACPANAV--GAPLSPRDVILSLREFANHALSAKELPKEAELD 362 Query: 221 PFR----------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T + C + CP + I +++ L++ Sbjct: 363 IHGKDVGQVFMETLWSCRTCLACVEICPVAVEHVPIIVQMRRNLVEAG 410 >gi|327191150|gb|EGE58194.1| glycolate oxidase protein, subunit F [Rhizobium etli CNPAF512] Length = 436 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|134294805|ref|YP_001118540.1| glycolate oxidase iron-sulfur subunit [Burkholderia vietnamiensis G4] gi|134137962|gb|ABO53705.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia vietnamiensis G4] Length = 408 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D GP + + +++ + L R Sbjct: 22 LRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEGAPVTRS-------TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T +C +CP G+ + + +I ++ ++ Sbjct: 75 CLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|172064502|ref|YP_001812153.1| hypothetical protein BamMC406_5493 [Burkholderia ambifaria MC40-6] gi|171997019|gb|ACB67937.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia ambifaria MC40-6] Length = 406 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + +++ E GER L R Sbjct: 22 LRACVHCGFCNATCPTYQVLGNELDGPRGRIYLIKQMLEG--EPCGER-----TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T NC +CP G+ + + R Sbjct: 75 CLTCRNCETTCPSGVRYHTLLDIGRAEAEKRA 106 >gi|254253186|ref|ZP_04946504.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158] gi|124895795|gb|EAY69675.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158] Length = 424 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ A + + + + L +CV C C+ +CP+Y D GP + Sbjct: 11 KQASSSMQTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYL 70 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +++ R L RC T +C +CP G+ + + +I ++ ++ Sbjct: 71 IKQMVEG---ASVTR----STQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEARV 122 >gi|307308480|ref|ZP_07588184.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sinorhizobium meliloti BL225C] gi|307319043|ref|ZP_07598474.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sinorhizobium meliloti AK83] gi|306895457|gb|EFN26212.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sinorhizobium meliloti AK83] gi|306901083|gb|EFN31691.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sinorhizobium meliloti BL225C] Length = 454 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 6/122 (4%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 Q W + + E L + L +CV C C+ +CP+Y D P Sbjct: 14 QRPQGATWSTRLQTNFSPEQLADPHVAESETILRKCVHCGFCTATCPTYVVLGDELDSPR 73 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + ++++ E + +++ RC + ++C +CP G++ + + + Sbjct: 74 GRIYLIKDMLENGRAADSETVTHID------RCLSCLSCLTTCPSGVDYMHLVDHARAHI 127 Query: 255 LD 256 Sbjct: 128 EK 129 >gi|115359685|ref|YP_776823.1| glycolate oxidase iron-sulfur subunit [Burkholderia ambifaria AMMD] gi|115284973|gb|ABI90489.1| protein of unknown function DUF224, cysteine-rich region domain protein [Burkholderia ambifaria AMMD] Length = 406 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + +++ E GER L R Sbjct: 22 LRACVHCGFCNATCPTYQVLGNELDGPRGRIYLIKQMLEG--EPCGER-----TQQHLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T NC +CP G+ + + R Sbjct: 75 CLTCRNCETTCPSGVRYHTLLDIGRAEAEKRA 106 >gi|78190533|gb|ABB29588.1| succinate dehydrogenase iron-sulfur protein [Platynereis dumerilii] Length = 97 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 4/97 (4%) Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 SC MNI+G NTLAC+ + + A +YPLPHM VIKDLV DM++FY+Q++SIEP+LK Sbjct: 1 SCAMNINGLNTLACLCKIDESSKATKIYPLPHMYVIKDLVPDMNNFYAQYKSIEPYLKKK 60 Query: 147 SPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTS 179 K Q+ E R+ +DG+YEC++CACCSTS Sbjct: 61 DLKEEDMGKVAYHQTPEQRKLLDGMYECILCACCSTS 97 >gi|115526680|ref|YP_783591.1| hypothetical protein RPE_4692 [Rhodopseudomonas palustris BisA53] gi|115520627|gb|ABJ08611.1| protein of unknown function DUF224, cysteine-rich region domain protein [Rhodopseudomonas palustris BisA53] Length = 437 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ E + +++ R Sbjct: 22 LRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLEQDAPPTAEVVKHID------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + + C +CP G+N + + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDQARARI 103 >gi|254254496|ref|ZP_04947813.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158] gi|124899141|gb|EAY70984.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158] Length = 641 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GRHRGEPNGPIVSALIEEQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|114764095|ref|ZP_01443334.1| glycolate oxidase, iron-sulfur subunit [Pelagibaca bermudensis HTCC2601] gi|114543453|gb|EAU46468.1| glycolate oxidase, iron-sulfur subunit [Roseovarius sp. HTCC2601] Length = 452 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + LQ + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTHFTDQQLQDPGTERANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYI 103 >gi|219852825|ref|YP_002467257.1| CoB/CoM heterodisulfide reductase, subunit C [Methanosphaerula palustris E1-9c] gi|219547084|gb|ACL17534.1| CoB/CoM heterodisulfide reductase, subunit C [Methanosphaerula palustris E1-9c] Length = 194 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 13/93 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C+ SCPS P + ++ E L DP L+ Sbjct: 42 AHMCFQCGTCTGSCPSA---------PRSTYRIREFMRKGVLGLDDE---ALTDPD-LWL 88 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T +CT CP+ + P I ++ + R I Sbjct: 89 CTTCYSCTDRCPRDIAPTDVIMAMRNLAFKRDI 121 >gi|218665622|ref|YP_002426085.1| glycolate oxidase, iron-sulfur subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517835|gb|ACK78421.1| glycolate oxidase, iron-sulfur subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 416 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + + L++L+ R Sbjct: 22 LRSCVHCGFCTATCPTYQILGDELDGPRGRIYLIKEFLAGAP-ATEHTLEHLD------R 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C +CP G+ A+ A+I ++ ++ Sbjct: 75 CLTCRACETTCPSGVRYARL-AEIGRAHIEAEV 106 >gi|206564656|ref|YP_002235419.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia J2315] gi|198040696|emb|CAR56682.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia J2315] Length = 406 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 12/95 (12%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD--EFQGERLDNLEDPFRL 224 L CV C C+ +CP+Y + GP + + L++ E LD Sbjct: 22 LRACVHCGFCNATCPTYQVLGNELDGPRGRIYLIKQLLEGEPCGERTQRHLD-------- 73 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC T NC +CP G+ + I ++++ Sbjct: 74 -RCLTCRNCETTCPSGVRYHTLL-DIGRAEAEKRV 106 >gi|307941743|ref|ZP_07657098.1| glycolate oxidase, iron-sulfur subunit [Roseibium sp. TrichSKD4] gi|307775351|gb|EFO34557.1| glycolate oxidase, iron-sulfur subunit [Roseibium sp. TrichSKD4] Length = 443 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +E L+ + L +CV C C+ +CP++ D P + + ++++ Sbjct: 2 QTNFTEEQLKDGHVAESEKILRKCVHCGFCTATCPTFALLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + ++C +CP G++ I + + Sbjct: 62 DKPADEKVVKHVD------RCLSCLSCMTTCPSGVHYMHLIDHARAHIEK 105 >gi|255263521|ref|ZP_05342863.1| glycolate oxidase, iron-sulfur subunit [Thalassiobium sp. R2A62] gi|255105856|gb|EET48530.1| glycolate oxidase, iron-sulfur subunit [Thalassiobium sp. R2A62] Length = 440 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQLADPSTARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYI 103 >gi|298242753|ref|ZP_06966560.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ktedonobacter racemifer DSM 44963] gi|297555807|gb|EFH89671.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ktedonobacter racemifer DSM 44963] Length = 704 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 49/171 (28%), Gaps = 29/171 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRS-IEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVM 172 LP + L + F+ ++ L + + E L Y C Sbjct: 225 LPRSKHLHLLATPFNVFFQNYKPKGALPLLENLEERDDYGVSKVEQFTWKQLLDGYACTE 284 Query: 173 CACCSTSCPSYWWNSDRY-----LGPAILLQAYRWLIDSRD-------------EFQGER 214 C C+T CP+ Y LG L I +D + E Sbjct: 285 CGRCNTVCPATNTGKPLYPKEIILGVKEALFVRSGEILGQDSLYSKLGIAGVKSDKTVEE 344 Query: 215 LDN--------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + L+ C T M C + CP + I ++ L+ Sbjct: 345 KEAHHEPMVGGIISQEALWSCTTCMACMEICPVSIEHVPKIVDMRRSLVME 395 >gi|224367893|ref|YP_002602056.1| HdrF2 [Desulfobacterium autotrophicum HRM2] gi|223690609|gb|ACN13892.1| HdrF2 [Desulfobacterium autotrophicum HRM2] Length = 833 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 23/171 (13%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 CG C G A + ++ + A ++ + H+ + Q I Sbjct: 371 CARCGRC-----GDICPAGIDLVRLWESADSL--MEHLGCPDNYTQVFDTPLDQWTGITF 423 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAY 200 + L + CV C C+ +CP ++ D LGP ++ Sbjct: 424 PSQEPDTNTFCFGLADQVEA-----FENCVQCTICTNACPVVAYDPDGTDLGPHQVMNLL 478 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + + ++ C T C + CP+G+ + +++ Sbjct: 479 RL----------GKKEMATASPMVWNCLTCYACQELCPQGIRITDILLELR 519 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 10/121 (8%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC---PSYWWNS 187 F I + + + + L+ + L C C CS C P+Y Sbjct: 275 PFTRMFHLIAIPVASSRKRVTPQSLEQGGEGLDFFSLTACTDCRFCSQVCNVYPNYQITG 334 Query: 188 DRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + P + ++A R + + D L + D C C CP G++ + Sbjct: 335 NAGILPHVKIEAIRTMAEKGIGDAGTAVLLRSGNDD-----CARCGRCGDICPAGIDLVR 389 Query: 246 A 246 Sbjct: 390 L 390 >gi|311748656|ref|ZP_07722441.1| hypothetical protein ALPR1_20393 [Algoriphagus sp. PR1] gi|126577185|gb|EAZ81433.1| hypothetical protein ALPR1_20393 [Algoriphagus sp. PR1] Length = 444 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 12/107 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGE 213 + Y C C C++ CP+ + L P ++ R +D+ + + Sbjct: 298 WVNVLNAYSCTECGRCTSECPANIT--GKTLSPRKIMMDVRDRAEEVGKSMDAGGKGLED 355 Query: 214 RLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D + C + C ++CP ++P I +++ + Sbjct: 356 GKSLLGDYITKEEINACTSCNACVEACPVNIDPLSIILQMRRYVAME 402 >gi|209965434|ref|YP_002298349.1| glycolate oxidase, iron-sulfur subunit [Rhodospirillum centenum SW] gi|209958900|gb|ACI99536.1| glycolate oxidase, iron-sulfur subunit [Rhodospirillum centenum SW] Length = 434 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L E + L +CV C C+ +CP+Y D P + + +++ Sbjct: 9 QLADAETAESEAVLRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKDMLEGGKPATET 68 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + ++C +CP G++ + + + Sbjct: 69 VVRHVD------RCLSCLSCMSTCPSGVHYMHLVDHARHHIEK 105 >gi|88813542|ref|ZP_01128775.1| hypothetical protein NB231_02895 [Nitrococcus mobilis Nb-231] gi|88789171|gb|EAR20305.1| hypothetical protein NB231_02895 [Nitrococcus mobilis Nb-231] Length = 412 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + + ++ L +C C C +CP+Y D P + + +++ Sbjct: 8 FIKDTPDGQEADQILRKCTHCGFCLATCPTYRLLGDELDSPRGRIYQIKQVLEGERPSPS 67 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L L RC T C +CP G+ ++ A + L+++++ Sbjct: 68 IQL-------HLDRCLTCRACETTCPSGVQYSRL-ADLGRTLVEQRV 106 >gi|296162566|ref|ZP_06845355.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] gi|295887190|gb|EFG67019.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] Length = 413 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 8/96 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y + GP + + +++ Q +L Sbjct: 19 EQILRACVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQMLEGEPVTQKTQL-------H 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC + NC +CP G+ + I L+R+I Sbjct: 72 LDRCLSCRNCETTCPSGVTYHTLL-DIGRAELERRI 106 >gi|284040378|ref|YP_003390308.1| hypothetical protein Slin_5543 [Spirosoma linguale DSM 74] gi|283819671|gb|ADB41509.1| protein of unknown function DUF224 cysteine-rich region domain protein [Spirosoma linguale DSM 74] Length = 456 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 24/160 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P V L + ++ ++ + + + Y C C Sbjct: 267 MPEITKEVQLALGLPVTTEMDGSQTNDNGEQPAEIGRFGAKDVQDLKWINLMNAYSCTEC 326 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------------ERLDNLED 220 C+ +CP+ + L P + ++D+RD + + L D Sbjct: 327 GRCTAACPANIT--GKKLSPR------KIMMDTRDRLEEIQQGWKTNGPDYRDDKSLLND 378 Query: 221 ---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C T C +CP +NP I +++ + Sbjct: 379 YITAEELNACTTCQACVMACPININPLDIILQLRRYRVME 418 >gi|190890516|ref|YP_001977058.1| glycolate oxidase, subunit F [Rhizobium etli CIAT 652] gi|190695795|gb|ACE89880.1| glycolate oxidase protein, subunit F [Rhizobium etli CIAT 652] Length = 457 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|167584672|ref|ZP_02377060.1| hypothetical protein BuboB_05016 [Burkholderia ubonensis Bu] Length = 641 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGSDAAYAGSPTPGIAV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GQHRGEPNGPIVSGLIEAQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|299134402|ref|ZP_07027595.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] gi|298591149|gb|EFI51351.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] Length = 439 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R L CV C C+ +CP+Y D P + + +++ + + +++ Sbjct: 2 RSSEKVLRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKSMLEEGIAPTSDVVKHID- 60 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC + ++C +CP G+N + + + Sbjct: 61 -----RCLSCLSCMTTCPSGVNYMHLVDHARTYI 89 >gi|218442236|ref|YP_002380565.1| hypothetical protein PCC7424_5350 [Cyanothece sp. PCC 7424] gi|218174964|gb|ACK73697.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cyanothece sp. PCC 7424] Length = 453 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 12/119 (10%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 IE ++ + + + CV C C ++CPSY P Sbjct: 1 MEIIEQSFNFQERLEKDIKGFDTKNPPQQNLIDSCVHCGFCLSTCPSYRVIGKEMDSPRG 60 Query: 196 LLQAYRWLI---DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + S DE E D C + C +CP G+ + IA + Sbjct: 61 RIYLMNGINKGQASLDETTAEHFDT---------CLGCLACVTTCPSGVKYDQLIAATR 110 >gi|297183619|gb|ADI19746.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 431 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +E L+ +++ +CV C C+ +CP++ D GP + + ++++ Sbjct: 2 QTNFTEEQLKLKDNKSSEKIFKKCVHCGMCNATCPTFNLLGDELDGPRGRIYLIQDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + C +CP +N I + + Sbjct: 62 EKKPTANVVKHID------RCLSCYGCMTTCPAEVNYMHLIDHGRKYIEK 105 >gi|163740403|ref|ZP_02147797.1| glycolate oxidase, iron-sulfur subunit [Phaeobacter gallaeciensis 2.10] gi|161386261|gb|EDQ10636.1| glycolate oxidase, iron-sulfur subunit [Phaeobacter gallaeciensis 2.10] Length = 444 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +++ L+ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFSEKQLRDPGTQRANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYI 103 >gi|118430880|ref|NP_146964.2| putative iron-sulfur protein [Aeropyrum pernix K1] gi|116062204|dbj|BAA79010.2| putative iron-sulfur protein [Aeropyrum pernix K1] Length = 672 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 10/103 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD--------EFQG 212 ++ C C C+ SCP+ S + L P ++ R + D E G Sbjct: 262 WKQRLDFEACTSCMRCTNSCPA--AESGKVLDPRGVVYGLRLKLREGDWESEVLDPENPG 319 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +P ++ C T C CP ++ I ++ ++ Sbjct: 320 DGSKAGVNPEAIWSCLTCGACVNECPVLIHHVDIILDVRRGMM 362 >gi|87118260|ref|ZP_01074159.1| iron-sulfur cluster-binding protein [Marinomonas sp. MED121] gi|86165894|gb|EAQ67160.1| iron-sulfur cluster-binding protein [Marinomonas sp. MED121] Length = 661 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 24/123 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSD------------------------RYLGPAI 195 ++ G CV C C + CP++ Y G Sbjct: 243 KWNQLLGFDACVQCGRCESMCPAFAAGQPLNPKKVIQDIVIGMSHAQDATTEANYYGSPY 302 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D + ++ L +P L+ C T C + CP + AI ++ L Sbjct: 303 PENQGVEVKDHKGNMHQPIVNGLIEPETLWSCTTCRACVEECPMFIEHVDAIVDMRRFLT 362 Query: 256 DRK 258 K Sbjct: 363 LEK 365 >gi|116622189|ref|YP_824345.1| hypothetical protein Acid_3081 [Candidatus Solibacter usitatus Ellin6076] gi|116225351|gb|ABJ84060.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 672 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 4/102 (3%) Query: 161 RQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLD 216 +++ Y C C CS CP+ S R L ++R + E + Sbjct: 289 WKQMLDFYSCADCGRCSDQCPAQAAGRALSPRLLTTKARDYSFRHYPVLGKPEAGPALVG 348 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C T C CP + + ++ L+D Sbjct: 349 AVFSEDEIWSCTTCGACEAECPLLVEYIDKVVDLRRGLVDEG 390 >gi|89053184|ref|YP_508635.1| hypothetical protein Jann_0693 [Jannaschia sp. CCS1] gi|88862733|gb|ABD53610.1| protein of unknown function DUF224 [Jannaschia sp. CCS1] Length = 446 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMMEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + + C +CP G++ + + + Sbjct: 62 DRPADEKTVKHID------RCLSCLACMTTCPSGVHYMHLVDHAREYI 103 >gi|255019782|ref|ZP_05291858.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Acidithiobacillus caldus ATCC 51756] gi|254970711|gb|EET28197.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Acidithiobacillus caldus ATCC 51756] Length = 417 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 18/104 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y D GP + + L+ + RL L R Sbjct: 22 LRDCVHCGFCNATCPTYRILGDEQDGPRGRIYLIKALLAGEQTTETTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK-----------MMLLDRKI 259 C C +CP G+ + + + L+R++ Sbjct: 75 CLGCRACETTCPSGVRYGRLLEIGRHLQNQALPRPPRAALERRL 118 >gi|163737185|ref|ZP_02144603.1| glycolate oxidase, iron-sulfur subunit [Phaeobacter gallaeciensis BS107] gi|161389789|gb|EDQ14140.1| glycolate oxidase, iron-sulfur subunit [Phaeobacter gallaeciensis BS107] Length = 444 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +++ L+ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFSEKQLRDPGTQRANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYI 103 >gi|170740030|ref|YP_001768685.1| hypothetical protein M446_1761 [Methylobacterium sp. 4-46] gi|168194304|gb|ACA16251.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium sp. 4-46] Length = 447 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFTPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPAPPEVVKHVD------RCLSCLSCMTTCPSGVHYMHLVDHARSYI 103 >gi|320352864|ref|YP_004194203.1| hypothetical protein Despr_0737 [Desulfobulbus propionicus DSM 2032] gi|320121366|gb|ADW16912.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobulbus propionicus DSM 2032] Length = 659 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 11/98 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C +C C CP++ + L P + + + G R NL D Sbjct: 283 WKDIFDADACTLCKRCQDRCPAFNT--GKPLSP------MKLVNQIGEVAFGNREANLID 334 Query: 221 PFR---LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + I +++ L+ Sbjct: 335 TIGREALWACTTCRACQDICPASIEHVDKIIEMRRNLV 372 >gi|305680283|ref|ZP_07403091.1| cysteine-rich domain protein [Corynebacterium matruchotii ATCC 14266] gi|305659814|gb|EFM49313.1| cysteine-rich domain protein [Corynebacterium matruchotii ATCC 14266] Length = 1034 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDS 206 + + C C C T CPS WN+ + L P + + R +L D Sbjct: 282 HLQDASWKMLLDAATCTECGRCQTQCPS--WNTGKPLSPKLFVTDIRDAAVANASYLQDP 339 Query: 207 RDEFQGERLDNLE-----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +++ P L+ C C + CP + + ++ Sbjct: 340 DTFATDTTYSDVDLLKLVGESNVIHPDVLWSCTNCGACVEQCPVDIEHIDHVVNMRR 396 >gi|225022443|ref|ZP_03711635.1| hypothetical protein CORMATOL_02483 [Corynebacterium matruchotii ATCC 33806] gi|224944800|gb|EEG26009.1| hypothetical protein CORMATOL_02483 [Corynebacterium matruchotii ATCC 33806] Length = 1035 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDS 206 + + C C C T CPS WN+ + L P + + R +L D Sbjct: 282 HLQDASWKMLLDAATCTECGRCQTQCPS--WNTGKPLSPKLFVTDIRDAAVANASYLQDP 339 Query: 207 RDEFQGERLDNLE-----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +++ P L+ C C + CP + + ++ Sbjct: 340 DTFATDTTYSDVDLLKLVGESNVIHPDVLWSCTNCGACVEQCPVDIEHIDHVVNMRR 396 >gi|241203245|ref|YP_002974341.1| hypothetical protein Rleg_0497 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857135|gb|ACS54802.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 436 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPTQLLDPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADTEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|302207013|gb|ADL11355.1| Iron-sulfur-binding reductase [Corynebacterium pseudotuberculosis C231] gi|302331572|gb|ADL21766.1| Iron-sulfur-binding reductase [Corynebacterium pseudotuberculosis 1002] gi|308277265|gb|ADO27164.1| Iron-sulfur-binding reductase [Corynebacterium pseudotuberculosis I19] Length = 887 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQG 212 + + C C C CP+ W++++ L P + + R +L D Sbjct: 294 WKMLLDAATCTECGRCQEQCPA--WHTEKPLSPKLFITDIRDAAVAQSSYLQDPATFAAD 351 Query: 213 ERLDNLE-----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + N++ P L+ C C + CP + +A ++ Sbjct: 352 DSHTNVDVLKLVGEAQVISPDVLWSCTNCGACVEQCPVDIEHIDHVANLRR 402 >gi|300859332|ref|YP_003784315.1| hypothetical protein cpfrc_01915 [Corynebacterium pseudotuberculosis FRC41] gi|300686786|gb|ADK29708.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 887 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQG 212 + + C C C CP+ W++++ L P + + R +L D Sbjct: 294 WKMLLDAATCTECGRCQEQCPA--WHTEKPLSPKLFITDIRDAAVAQSSYLQDPATFAAD 351 Query: 213 ERLDNLE-----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + N++ P L+ C C + CP + +A ++ Sbjct: 352 DSHTNVDVLKLVGEAQVISPDVLWSCTNCGACVEQCPVDIEHIDHVANLRR 402 >gi|239907382|ref|YP_002954123.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239797248|dbj|BAH76237.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 470 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 18/150 (12%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA-KELLQSHEDRQKIDGLYE 169 + + LP + + L V +S F R E K+ + Sbjct: 250 VVLDILPPAATGQTLPVHLSFFTGARREGERDGPREMHLVILDNGRSDILADPKLRSILR 309 Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + + + D Q Sbjct: 310 CIRCGACLNVCPVYQSVGGHAYGTVYPGPMGSVISPLLKDNPGDPRQP------------ 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C+++CP G++ + +++ + Sbjct: 358 FACTHCAACSEACPAGIDHPALLQELRRRV 387 >gi|78221905|ref|YP_383652.1| hypothetical protein Gmet_0685 [Geobacter metallireducens GS-15] gi|78193160|gb|ABB30927.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 659 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 15/156 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP + L + F+ S + + ++ D D C C Sbjct: 217 LPMSKHMHILTAIPNCFFQNLGSTSTQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTEC 276 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLI----DSRDEFQGERLDNL-------EDPF 222 C +CP+ + L P ++ + + + + + R+ + Sbjct: 277 GRCQDACPANAT--GKSLNPRQVVHSLKANLLANEQALKAGEPPRVPLIGAEGEGTNTEE 334 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C T C Q+CP + + ++ L++ K Sbjct: 335 TIWACTTCGACLQACPVMIEHPSKLVSMRRHLVEMK 370 >gi|330967281|gb|EGH67541.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 653 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 26/122 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY----------------RWLI 204 ++ G CV C C +CP++ + L P L+Q + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDMVVGLAGGTDATFAGSPYPSL 293 Query: 205 DSRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + + G ++ L D L+ C T C + CP + AI ++ L Sbjct: 294 DGKGKPLGTHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRYLTL 353 Query: 257 RK 258 K Sbjct: 354 EK 355 >gi|22299206|ref|NP_682453.1| glycolate oxidase iron-sulfur subunit [Thermosynechococcus elongatus BP-1] gi|22295388|dbj|BAC09215.1| glycolate oxidase iron-sulfur subunit [Thermosynechococcus elongatus BP-1] Length = 436 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 7/96 (7%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 D + CV C C ++CPSY P + + + + + Sbjct: 5 DPVADPPDPHLIDACVHCGFCLSTCPSYRVLGTEMDSPRGRIYLMDAINEGQ-------V 57 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ K IA + Sbjct: 58 QLAAVAQHFDSCLGCLACVTTCPSGVEYDKLIAATR 93 >gi|84500711|ref|ZP_00998960.1| glycolate oxidase, iron-sulfur subunit [Oceanicola batsensis HTCC2597] gi|84391664|gb|EAQ03996.1| glycolate oxidase, iron-sulfur subunit [Oceanicola batsensis HTCC2597] Length = 430 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 6/109 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E L + + L CV C C+ +CP+Y D P + + Sbjct: 3 TEFTPEQLSDPGTARANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK------ 56 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARDYIEK 105 >gi|73538643|ref|YP_299010.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia eutropha JMP134] gi|72121980|gb|AAZ64166.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224, cysteine-rich region [Ralstonia eutropha JMP134] Length = 641 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGSDAAYAGTPTPGIPV 304 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L D L+ C T C Q CP + AI ++ Sbjct: 305 GRHRGEPNGPIVSGLIDAQTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|148263284|ref|YP_001229990.1| hypothetical protein Gura_1213 [Geobacter uraniireducens Rf4] gi|146396784|gb|ABQ25417.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 661 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDS----RDEFQ--- 211 + + + C C C +CP+ + L P ++ A + L + R E Sbjct: 269 WKDLFDGFSCTECGRCQNACPATAT--GKPLNPRQVIHAIKTNLLANGPYLQRGEKPVIP 326 Query: 212 --GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 GE + ++ C T C +CP + I K++ L++ Sbjct: 327 LIGEESEGSNTEDTIWSCTTCGACIAACPVMIEQMPKIIKMRRHLVE 373 >gi|226364952|ref|YP_002782734.1| iron-sulfur binding reductase [Rhodococcus opacus B4] gi|226243441|dbj|BAH53789.1| putative iron-sulfur binding reductase [Rhodococcus opacus B4] Length = 1094 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 46/162 (28%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ P + ED C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MEDADPDTDTFGAGNIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLITSL 326 Query: 201 R---------WLIDSR-----------------DEFQ-----------GER--------- 214 R L R D+ + ER Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEVGLVNGEGAVDDAKLAAIPEAARQEAERKLVGETVEG 386 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + D L+ C C + CP + I ++ + Sbjct: 387 ELAPVIDAETLWSCTNCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|298489872|ref|YP_003720049.1| hypothetical protein Aazo_0353 ['Nostoc azollae' 0708] gi|298231790|gb|ADI62926.1| protein of unknown function DUF224 cysteine-rich region domain protein ['Nostoc azollae' 0708] Length = 449 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + R +++ Sbjct: 26 PDPKLIDSCVHCGFCLSTCPSYRVLGKEMDSPRGRIYLMDAINEGRIALNTVTIEH---- 81 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 82 --FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 114 >gi|126666329|ref|ZP_01737308.1| probable ferredoxin [Marinobacter sp. ELB17] gi|126629130|gb|EAZ99748.1| probable ferredoxin [Marinobacter sp. ELB17] Length = 660 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 35/115 (30%), Gaps = 21/115 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQA-YRWLIDS---- 206 ++ G CV C C CP++ D +G A A Y Sbjct: 236 WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLIQDMVVGLAGGSDAGYHGSPHPGKPV 295 Query: 207 ------RDEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 DE R L L+ C T C + CP + AI ++ + Sbjct: 296 GEHHGALDEPIIVREGKALVSAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHI 350 >gi|148265078|ref|YP_001231784.1| hypothetical protein Gura_3039 [Geobacter uraniireducens Rf4] gi|146398578|gb|ABQ27211.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 661 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP+ W +D+ L P ++Q + G L Sbjct: 283 WKDIFDADACTSCKRCQDRCPA--WTTDKPLSPMKVVQQIGEVAFG---NSGANLIETVS 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T +C + CP + I ++ L+ Sbjct: 338 QDALWSCTTCRSCQEICPANVEHVNKILDMRRNLV 372 >gi|163793403|ref|ZP_02187378.1| glycolate oxidase iron-sulfur subunit [alpha proteobacterium BAL199] gi|159181205|gb|EDP65720.1| glycolate oxidase iron-sulfur subunit [alpha proteobacterium BAL199] Length = 437 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQG 212 L + L CV C C+ +CP+Y D P + + ++++ RD + Sbjct: 9 QLADPDVAVANQILRSCVHCGFCTATCPTYALLGDELDSPRGRIYLIKDMLENDRDASEQ 68 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + RC + ++C +CP G++ + + + Sbjct: 69 EVK-------HIDRCLSCLSCMTTCPSGVHYMHLVDHARAHI 103 >gi|254453233|ref|ZP_05066670.1| glycolate oxidase, iron-sulfur subunit [Octadecabacter antarcticus 238] gi|198267639|gb|EDY91909.1| glycolate oxidase, iron-sulfur subunit [Octadecabacter antarcticus 238] Length = 444 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + ++ L+ + D L CV C C+ +CP+Y D P + + Sbjct: 5 DMQTTFTEDQLRDPATKMSNDILRTCVHCGFCTATCPTYQILGDELDSPRGRIYLIK--- 61 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 62 ---DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYI 108 >gi|121610970|ref|YP_998777.1| hypothetical protein Veis_4054 [Verminephrobacter eiseniae EF01-2] gi|121555610|gb|ABM59759.1| protein of unknown function DUF224, cysteine-rich region domain protein [Verminephrobacter eiseniae EF01-2] Length = 632 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 21/114 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY------------------- 200 ++ CV C C +CP++ + L P L+Q Sbjct: 235 AWNRLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPG 292 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + + + L D L+ C T C Q CP + AI ++ L Sbjct: 293 RPIGAHQGAPGQPIVPGLIDSDTLWSCTTCRACVQECPMLIEHVDAIVDMRRHL 346 >gi|294813498|ref|ZP_06772141.1| Iron-sulfur-binding reductase [Streptomyces clavuligerus ATCC 27064] gi|326442096|ref|ZP_08216830.1| iron-sulfur-binding reductase [Streptomyces clavuligerus ATCC 27064] gi|294326097|gb|EFG07740.1| Iron-sulfur-binding reductase [Streptomyces clavuligerus ATCC 27064] Length = 773 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 46/139 (33%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 + I C C C + CP+ WN+ + L P +L+ + R Sbjct: 297 WKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTAE 354 Query: 206 SRDEFQGERLDNL-----------------------------EDPFRLYRCHTIMNCTQS 236 ++ E L ++ DP L+ C T C + Sbjct: 355 GEEKASAEALKDVPASALAEAERPLIGTAGAVSDSGFATGGVIDPDVLWSCTTCGACVEQ 414 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP + I ++ + Sbjct: 415 CPVDIEHIDHIVDMRRYQV 433 >gi|222054906|ref|YP_002537268.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221564195|gb|ACM20167.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 660 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 19/176 (10%) Query: 98 LACVKDMKDIKGAIAVYP----LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 LA + A+ + LPH + L + F+ + K Sbjct: 199 LAPFAAISWWIHALVLLAFMCFLPHSKHMHILTAIPNCFFQTLGKANTQPREEFIKGNSF 258 Query: 154 LLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEF 210 + + D Y C C C +CP+ N+ + L P ++ A + L+ + Sbjct: 259 GVARVDQFTWKDLFDGYSCTECGRCQDACPA--TNTGKPLNPRQVIHAIKTNLLQNGPLM 316 Query: 211 QGERLDNL----------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q + ++ C T C Q+CP + I K++ L+ Sbjct: 317 QEGGKPVVPLIGEEGEGTNTEETIWSCTTCGACLQACPVMIEQMPKIIKMRRHLVQ 372 >gi|254390070|ref|ZP_05005291.1| iron-sulphur-binding reductase [Streptomyces clavuligerus ATCC 27064] gi|197703778|gb|EDY49590.1| iron-sulphur-binding reductase [Streptomyces clavuligerus ATCC 27064] Length = 760 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 46/139 (33%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 + I C C C + CP+ WN+ + L P +L+ + R Sbjct: 284 WKGILDFSTCTECGRCQSQCPA--WNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKTAE 341 Query: 206 SRDEFQGERLDNL-----------------------------EDPFRLYRCHTIMNCTQS 236 ++ E L ++ DP L+ C T C + Sbjct: 342 GEEKASAEALKDVPASALAEAERPLIGTAGAVSDSGFATGGVIDPDVLWSCTTCGACVEQ 401 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP + I ++ + Sbjct: 402 CPVDIEHIDHIVDMRRYQV 420 >gi|331700267|ref|YP_004336506.1| hypothetical protein Psed_6565 [Pseudonocardia dioxanivorans CB1190] gi|326954956|gb|AEA28653.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudonocardia dioxanivorans CB1190] Length = 764 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 54/173 (31%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYWWNSDRYLG 192 + + A ED C C C + CP+ WN+ + L Sbjct: 254 MMSDGKKIDFEDPDEDAIFGRGKIEDFTWKGMLDFATCTECGRCQSQCPA--WNTGKPLS 311 Query: 193 PAILLQAYR--------WLIDSRDEFQGERLD---------------------------- 216 P +++ R ++I +D + E +D Sbjct: 312 PKLVIMDLRDHLFAKAPYIIGGKDLPEVESVDFDVLEAATNGHGHGVPESGFGRVLGSGP 371 Query: 217 --------------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C + C + CP + I ++ + Sbjct: 372 QQAARPLVGTAEQHGVIDPDVLWSCTSCGACVEQCPVDIEHVDHIIDMRRHQV 424 >gi|118581536|ref|YP_902786.1| hypothetical protein Ppro_3135 [Pelobacter propionicus DSM 2379] gi|118504246|gb|ABL00729.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pelobacter propionicus DSM 2379] Length = 712 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 7/143 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + LP + + L S + + +K + K +C+ Sbjct: 249 LTALPRSATAQLLTSYCSIITGPVENTDGSMKQLHIILMDNRRTEMSHDVKFKQAMQCIR 308 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C CP + G L E L N ED L C N Sbjct: 309 CGSCLNVCPIFRLVGGHVFGSVYTGGIGTIL-----TAWFEALQNSEDIQGL--CIQCGN 361 Query: 233 CTQSCPKGLNPAKAIAKIKMMLL 255 C + CP L+ I +I+ L+ Sbjct: 362 CKEVCPGKLDIPDMILEIRRRLV 384 >gi|83942191|ref|ZP_00954653.1| glycolate oxidase, iron-sulfur subunit [Sulfitobacter sp. EE-36] gi|83848011|gb|EAP85886.1| glycolate oxidase, iron-sulfur subunit [Sulfitobacter sp. EE-36] Length = 463 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L++ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTAEQLKNPATARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + + +++ RC + + C +CP G++ + + + R Sbjct: 62 DRDPDEKTVKHID------RCLSCLACMTTCPSGVHYMHLVDHARDYIEKR 106 >gi|254438558|ref|ZP_05052052.1| Cysteine-rich domain protein [Octadecabacter antarcticus 307] gi|198254004|gb|EDY78318.1| Cysteine-rich domain protein [Octadecabacter antarcticus 307] Length = 443 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ L+ + D L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTEDQLRDPATKMSNDILRTCVHCGFCTATCPTYQILGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYI 103 >gi|254465986|ref|ZP_05079397.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium Y4I] gi|206686894|gb|EDZ47376.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium Y4I] Length = 440 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ LQ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTEQQLQDPGTKRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEK 105 >gi|126733505|ref|ZP_01749252.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. CCS2] gi|126716371|gb|EBA13235.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. CCS2] Length = 439 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQLKDPAIQRSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERKPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEK 105 >gi|156744211|ref|YP_001434340.1| hypothetical protein Rcas_4296 [Roseiflexus castenholzii DSM 13941] gi|156235539|gb|ABU60322.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 441 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 5/112 (4%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + + D + CV C C +CP+Y P + + + D Sbjct: 4 EHEVTARVPFAGPDIPSDAVINSCVHCGLCLPACPTYRETGLEQFSPRGRIYLMKAVADG 63 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R + + C C CP G+ + + + + K Sbjct: 64 RIGMESDVFQEQMS-----ACLNCRACEAVCPSGVLYGQILETSRTQIEQAK 110 >gi|15807549|ref|NP_296285.1| iron-sulfur binding reductase [Deinococcus radiodurans R1] gi|6460387|gb|AAF12101.1|AE002085_4 iron-sulfur binding reductase, putative [Deinococcus radiodurans R1] Length = 1132 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 20/137 (14%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + +E ++ PK E L+ E ++ Y C+ C C CP+ + L PA Sbjct: 318 MKGLEEAMEAEEPKLGVEKLEDLE-WPRLLDAYACIQCNRCQDVCPANAT--GKALSPAA 374 Query: 196 LLQAYR------------WLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCP 238 L R +++ GE L+ + ++ C T C Q CP Sbjct: 375 LEINKRMELNVIAAQHNPFVLRPVPFEAGESTARPLLEYAINEESVWACTTCGACMQVCP 434 Query: 239 KGLNPAKAIAKIKMMLL 255 I I+ L+ Sbjct: 435 VQDEQMLDIVDIRRNLV 451 >gi|13542226|ref|NP_111914.1| Fe-S oxidoreductase [Thermoplasma volcanium GSS1] gi|14325660|dbj|BAB60563.1| hypohtetical protein [Thermoplasma volcanium GSS1] Length = 659 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 7/98 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C C +CP+Y +D L P +++Q + L+++ E + + Sbjct: 291 YRTAAMACTDCGRCERACPAYASGTD--LDPRLVVQNVKKLVNT----DSELVPVVLTEN 344 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL-DRKI 259 + C T M C + CP + P + + + L+ + K+ Sbjct: 345 ASWSCTTCMACVEECPVLIRPYSFVVETRRNLVMENKV 382 >gi|226226004|ref|YP_002760110.1| glycolate oxidase iron-sulfur subunit [Gemmatimonas aurantiaca T-27] gi|226089195|dbj|BAH37640.1| glycolate oxidase iron-sulfur subunit [Gemmatimonas aurantiaca T-27] Length = 456 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 10/107 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L Q GL CV C C +CP+Y D P + R +++ Sbjct: 16 TPCALPGTPLAQAAAGLDACVHCGFCLQACPTYVNLEDENDSPRGRIVLMRRMLEGDI-- 73 Query: 211 QGERLDNLEDPF--RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+DP + RC C +CP G+ + + + + Sbjct: 74 ------ALDDPAARHIDRCLGCRACETACPSGVPYGELLEATRATMA 114 >gi|13475760|ref|NP_107327.1| glycolate oxidase subunit, (Fe-S)protein [Mesorhizobium loti MAFF303099] gi|14026516|dbj|BAB53113.1| glycolate oxidase subunit [Mesorhizobium loti MAFF303099] Length = 441 Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + L + L +CV C C+ +CP+Y + P + + D Sbjct: 2 QTNFSSDQLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIY---LIKDM 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + + + RC + + C +CP G+N + + + + Sbjct: 59 LENGRPADKEIVT---HIDRCLSCLACMTTCPSGVNYMHLVDHARAHIQE 105 >gi|78190595|gb|ABB29619.1| succinate dehydrogenase iron-sulfur protein [Priapulus caudatus] Length = 96 Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 3/96 (3%) Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDG NTLAC K +++ VYPLPHM VIKDLV D S+FY+Q+ SI+PWL+ Sbjct: 1 SCSMNIDGGNTLACICKINENVGKTTKVYPLPHMHVIKDLVPDFSNFYAQYASIQPWLQK 60 Query: 146 VSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTS 179 + Q+ EDR K+DGLYEC++CACCSTS Sbjct: 61 KDEANIGKEAYTQTVEDRDKLDGLYECILCACCSTS 96 >gi|83953246|ref|ZP_00961968.1| glycolate oxidase, iron-sulfur subunit [Sulfitobacter sp. NAS-14.1] gi|83842214|gb|EAP81382.1| glycolate oxidase, iron-sulfur subunit [Sulfitobacter sp. NAS-14.1] Length = 463 Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L++ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTAEQLKNPATARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + + +++ RC + + C +CP G++ + + + R Sbjct: 62 DRDPDEKTVKHID------RCLSCLACMTTCPSGVHYMHLVDHARDYIEKR 106 >gi|229593037|ref|YP_002875156.1| putative iron-binding membrane protein [Pseudomonas fluorescens SBW25] gi|229364903|emb|CAY52984.1| putative iron-binding membrane protein [Pseudomonas fluorescens SBW25] Length = 652 Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 22/120 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY----------- 200 ++ G CV C C +CP++ D +G A A Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSING 295 Query: 201 --RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L + ++ L D L+ C T C + CP + AI ++ L K Sbjct: 296 GGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 355 >gi|330501445|ref|YP_004378314.1| hypothetical protein MDS_0531 [Pseudomonas mendocina NK-01] gi|328915731|gb|AEB56562.1| hypothetical protein MDS_0531 [Pseudomonas mendocina NK-01] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --GERL------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 GE L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHSGGPHQPIVSLQGKALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|87311927|ref|ZP_01094038.1| putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase [Blastopirellula marina DSM 3645] gi|87285367|gb|EAQ77290.1| putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase [Blastopirellula marina DSM 3645] Length = 462 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 8/126 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 YS H + + ++ +C+ C C +CP Y + G Sbjct: 267 YSSHFHGPLPGGELHIILVDNGRSNLMGSEQFRNSLKCIRCGACMNTCPVYRRSGGHSYG 326 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L SRD + L + C +CT CP ++ + + + Sbjct: 327 TTVPGPIGSILAPSRDSKAHKSLP--------FACTLCGSCTDVCPVKIDLHHELLEWRG 378 Query: 253 MLLDRK 258 + R Sbjct: 379 EIRQRG 384 >gi|206561629|ref|YP_002232394.1| glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia J2315] gi|198037671|emb|CAR53614.1| putative glycolate oxidase iron-sulfur subunit [Burkholderia cenocepacia J2315] Length = 408 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 AAVTRS-------TQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|172041496|ref|YP_001801210.1| putative Fe-S oxidoreductase [Corynebacterium urealyticum DSM 7109] gi|171852800|emb|CAQ05776.1| putative Fe-S oxidoreductase [Corynebacterium urealyticum DSM 7109] Length = 1204 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 41/151 (27%), Gaps = 40/151 (26%) Query: 143 LKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ P S ED C C C CP+ WN+++ L P L+ Sbjct: 284 MENADPDTDNIGAGSIEDFTWKGWMDFTSCTECGRCQEQCPA--WNTEKPLSPKKLIMDL 341 Query: 201 R---------------------------WLIDSRDEFQGER--LDNL-------EDPFRL 224 R D E + L + DP L Sbjct: 342 RDHAVSSAPYLLEKASAPTGGGLFTGDATEADPAAEAHADMPLLQLVAEGEMGVIDPDVL 401 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C C + CP + I ++ + Sbjct: 402 WSCTNCGACVEQCPVDIEHIDHIVDMRRYKV 432 >gi|154150133|ref|YP_001403751.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Methanoregula boonei 6A8] gi|153998685|gb|ABS55108.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanoregula boonei 6A8] Length = 193 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 13/120 (10%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + + + + + C C C+ SCPS P + Sbjct: 14 KLHDQRYYREDSTADFMKRVEASSRTIAHMCYQCGTCTGSCPSA---------PRSTYRI 64 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +++ R G + L DP L+ C T +CT CP+ + P I ++ M I Sbjct: 65 RKFM---RRAVLGFETEALTDPD-LWLCTTCYSCTDRCPRDIAPTDVIMSMRNMAFTHDI 120 >gi|90419952|ref|ZP_01227861.1| glycolate oxidase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] gi|90335993|gb|EAS49741.1| glycolate oxidase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] Length = 447 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L E + +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTTFSPAQLADPETAHSEQIIRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKEMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + + C +CP G+N + + + Sbjct: 62 DRPADEKTVTHID------RCLSCLACMTTCPSGVNYMHLVDHARAHI 103 >gi|297564385|ref|YP_003683358.1| CoB--CoM heterodisulfide reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848834|gb|ADH70852.1| CoB--CoM heterodisulfide reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 737 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 48/192 (25%), Gaps = 37/192 (19%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L + +Y + L + + + P Sbjct: 231 LTMGIGWHRFLAPVNIYFKRNADGSPSLGAA-KQMMDKSGTKPLDFEEADPDEDPFGAGK 289 Query: 158 HEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDS- 206 ED C C C + CP+ WN+ + L P ++ + +L+ Sbjct: 290 LEDFTWKGLLDFTTCTECGRCQSQCPA--WNTGKPLSPKKVILDLQQHTYEKAPYLLQGI 347 Query: 207 -----------------------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R E + + P L+ C C + CP + Sbjct: 348 TEETLAEKPDESHAGVDVLALLNRPLVGTEEENGVIHPDELWACTNCGACVEQCPVDIEH 407 Query: 244 AKAIAKIKMMLL 255 I ++ + Sbjct: 408 IDHILDMRRYQV 419 >gi|52352368|gb|AAU43658.1| FAD/FMN-containing dehydrogenases [uncultured archaeon GZfos23H7] Length = 646 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 7/101 (6%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 E+ +Y C+ C C+ +CP+Y ++ + P L + L++ + + Sbjct: 487 FKEESVLEKTVYSCIKCGSCAANCPAYLVTNEESVVPKNKLYLAKKLLEGEEISK----- 541 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D +++ C C + C L+ A +++ ML DR Sbjct: 542 --NDSDKVFLCTHCGMCREVCQNDLDLVGAWTELEKMLEDR 580 >gi|148262235|ref|YP_001228941.1| hypothetical protein Gura_0152 [Geobacter uraniireducens Rf4] gi|146395735|gb|ABQ24368.1| protein of unknown function DUF162 [Geobacter uraniireducens Rf4] Length = 711 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 7/145 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + LP + + L +S + + +K + + K +C+ Sbjct: 249 LTALPRSATAQLLTSYVSIITGPAPNTDGSMKDLHIILMDNRRTEMANDPKFKQAMQCIR 308 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C CP + +G + + Y I + + L E+ L C N Sbjct: 309 CGSCLNVCPVFRL-----VGGHVFGKIYTGGIGTILTAWFDELKKSEEIQGL--CIQCGN 361 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP ++ + I +I+ L+ + Sbjct: 362 CKEICPGKIDIPELIMEIRRRLVQK 386 >gi|260428928|ref|ZP_05782905.1| glycolate oxidase, iron-sulfur subunit [Citreicella sp. SE45] gi|260419551|gb|EEX12804.1| glycolate oxidase, iron-sulfur subunit [Citreicella sp. SE45] Length = 430 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTNFTDEQLQDPGTARANEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER+ + + + RC + + C +CP G++ + + + + Sbjct: 57 -DMLENERVPDEKTVKHVDRCLSCLACMTTCPSGVHYMHLVDHARAYIEE 105 >gi|229492073|ref|ZP_04385885.1| cysteine-rich domain protein [Rhodococcus erythropolis SK121] gi|229321026|gb|EEN86835.1| cysteine-rich domain protein [Rhodococcus erythropolis SK121] Length = 890 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 43/162 (26%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGP------- 193 ++ V P + ED C C C + CP+ WN+ + L P Sbjct: 269 MENVDPDTDTLGAGNIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 326 Query: 194 --------------------------------------AILLQAYRWLIDSR--DEFQGE 213 A + +A R D + E Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEIGLVDSEGNVKEGALAAIPEAARLEADRKLVGETVEG 386 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + D L+ C C + CP + I ++ + Sbjct: 387 EMAPVIDAETLWSCTNCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|253699943|ref|YP_003021132.1| hypothetical protein GM21_1314 [Geobacter sp. M21] gi|251774793|gb|ACT17374.1| protein of unknown function DUF162 [Geobacter sp. M21] Length = 711 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 7/108 (6%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K +C+ C C CP + G L Sbjct: 287 MDNRRTEMAQDPKFKQALQCIRCGSCLNVCPIFRLVGGHVFGSIYTGGIGTIL-----TA 341 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L ED L C NC + CP L+ + I +I+ L+ K Sbjct: 342 WFDELKKSEDIQGL--CIQCGNCKEVCPGKLDIPEMIMEIRRRLVLEK 387 >gi|197119283|ref|YP_002139710.1| iron-sulfur cluster-binding DUF162/cysteine-rich domain-containing protein [Geobacter bemidjiensis Bem] gi|197088643|gb|ACH39914.1| iron-sulfur cluster-binding DUF162/cysteine-rich domain protein [Geobacter bemidjiensis Bem] Length = 711 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 7/108 (6%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K +C+ C C CP + G L Sbjct: 287 MDNRRTEMAQDPKFKQALQCIRCGSCLNVCPIFRLVGGHVFGSIYTGGIGTIL-----TA 341 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L ED L C NC + CP L+ + I +I+ L+ K Sbjct: 342 WFDELKKSEDIQGL--CIQCGNCKEVCPGKLDIPEMIMEIRRRLVLEK 387 >gi|296392259|ref|ZP_06881734.1| putative ferredoxin [Pseudomonas aeruginosa PAb1] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|107104501|ref|ZP_01368419.1| hypothetical protein PaerPA_01005578 [Pseudomonas aeruginosa PACS2] gi|218894503|ref|YP_002443373.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|218774732|emb|CAW30549.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|152987806|ref|YP_001351497.1| putative ferredoxin [Pseudomonas aeruginosa PA7] gi|150962964|gb|ABR84989.1| probable ferredoxin [Pseudomonas aeruginosa PA7] Length = 658 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 241 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 298 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 299 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 358 Query: 258 K 258 K Sbjct: 359 K 359 >gi|15600592|ref|NP_254086.1| DgcB, Dimethylglycine catabolism [Pseudomonas aeruginosa PAO1] gi|9951724|gb|AAG08784.1|AE004952_6 DgcB, Dimethylglycine catabolism [Pseudomonas aeruginosa PAO1] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|84515994|ref|ZP_01003355.1| glycolate oxidase, iron-sulfur subunit [Loktanella vestfoldensis SKA53] gi|84510436|gb|EAQ06892.1| glycolate oxidase, iron-sulfur subunit [Loktanella vestfoldensis SKA53] Length = 439 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQLQDSGTARANQILRTCVHCGFCTATCPTYQILGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + ER + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERKPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEK 105 >gi|254242950|ref|ZP_04936272.1| ferredoxin [Pseudomonas aeruginosa 2192] gi|126196328|gb|EAZ60391.1| ferredoxin [Pseudomonas aeruginosa 2192] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|116053546|ref|YP_793873.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|313111670|ref|ZP_07797464.1| putative ferredoxin [Pseudomonas aeruginosa 39016] gi|115588767|gb|ABJ14782.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|310883966|gb|EFQ42560.1| putative ferredoxin [Pseudomonas aeruginosa 39016] Length = 653 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|188582588|ref|YP_001926033.1| hypothetical protein Mpop_3347 [Methylobacterium populi BJ001] gi|179346086|gb|ACB81498.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium populi BJ001] Length = 465 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPASREVVKHVD------RCLSCLSCMTTCPSGVHYMHLVDHARTHIEK 105 >gi|323485529|ref|ZP_08090875.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Clostridium symbiosum WAL-14163] gi|323401177|gb|EGA93529.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Clostridium symbiosum WAL-14163] Length = 103 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPM-VLDGLLYIKNKIDPTLTL--RRSCREGIC 85 +IYR+NP+ DT+ VD+ M V+ L YI +++D TL+ C +GIC Sbjct: 2 NVKIYRFNPETDQEARYDTFRVDVSREDRMTVMKLLEYIGDELDGTLSFYMHSVCGQGIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 G C + ++G LAC + + + P +V+KDLV Sbjct: 62 GRCAVKVNGKVKLACCTVLT--GDDVILEP-AGKNVVKDLVT 100 >gi|325292049|ref|YP_004277913.1| glycolate oxidase, iron-sulfur subunit [Agrobacterium sp. H13-3] gi|325059902|gb|ADY63593.1| glycolate oxidase, iron-sulfur subunit [Agrobacterium sp. H13-3] Length = 433 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTSFTPEQLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + +++ RC + + CT +CP G++ + + + Sbjct: 62 SRPADREVVTHID------RCLSCLACTTTCPSGVDYMHLVDHARAHI 103 >gi|291302453|ref|YP_003513731.1| hypothetical protein Snas_5001 [Stackebrandtia nassauensis DSM 44728] gi|290571673|gb|ADD44638.1| protein of unknown function DUF224 cysteine-rich region domain protein [Stackebrandtia nassauensis DSM 44728] Length = 426 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 CV C C ++CP+Y P +Q + ++ E +++++ R Sbjct: 10 ADTCVHCGFCLSTCPTYELWGQEMDSPRGRIQLMKLGLEG-AELTDSTVNHMD------R 62 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C M C +CP G+ + K ++ + Sbjct: 63 CLGCMACVTACPSGVRY-DVLITAKRAEVEEQ 93 >gi|284993154|ref|YP_003411709.1| hypothetical protein Gobs_4801 [Geodermatophilus obscurus DSM 43160] gi|284066400|gb|ADB77338.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geodermatophilus obscurus DSM 43160] Length = 543 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 11/91 (12%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF--RLYR 226 +CV C C +CP+Y + P + + ++ + L+D + Sbjct: 111 DCVHCGFCLPTCPTYVLWGEEMDSPRGRIYLMKEALEG---------EPLDDSMVRHFDQ 161 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C M C +CP G+ K I + + R Sbjct: 162 CLGCMACVTACPSGVQYDKLIEATRPQIERR 192 >gi|226304826|ref|YP_002764784.1| iron-sulfur binding reductase [Rhodococcus erythropolis PR4] gi|226183941|dbj|BAH32045.1| putative iron-sulfur binding reductase [Rhodococcus erythropolis PR4] Length = 1061 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 51/162 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ V P + ED C C C + CP+ WN+ + L P +L+ + Sbjct: 269 MENVDPDTDTLGAGNIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMSL 326 Query: 201 R---------WLIDSR-DEFQGE----------------------RLDN----------- 217 R L R D E RL+ Sbjct: 327 RDHGYAKAPYLLAGGRKDMGGDEIGLVDSEGNVKEAALAAIPEAARLEADRKLVGETVEG 386 Query: 218 ----LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D L+ C C + CP + I ++ + Sbjct: 387 EMAPVIDAETLWSCTNCGACVEQCPVDIEHVDHIIDMRRYQV 428 >gi|154244868|ref|YP_001415826.1| hypothetical protein Xaut_0918 [Xanthobacter autotrophicus Py2] gi|154158953|gb|ABS66169.1| protein of unknown function DUF224 cysteine-rich region domain protein [Xanthobacter autotrophicus Py2] Length = 720 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 42/158 (26%), Gaps = 12/158 (7%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECV 171 + +P+ S + + + + + C Sbjct: 262 IALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADRIGYRELGDVASRYLVQADACT 321 Query: 172 MCACCSTSCPSYWW-----NSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLED---- 220 C C +CP+ D L A+ L R L L Sbjct: 322 KCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVLPKPRAAGCATPLIGLASGEIR 381 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 P L+ C CT+ CP G+ I ++ L+D Sbjct: 382 PETLWSCRQCGACTEICPVGVEHVPLINMLRRTLVDEG 419 >gi|296138202|ref|YP_003645445.1| hypothetical protein Tpau_0465 [Tsukamurella paurometabola DSM 20162] gi|296026336|gb|ADG77106.1| protein of unknown function DUF224 cysteine-rich region domain protein [Tsukamurella paurometabola DSM 20162] Length = 1131 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 43/163 (26%), Gaps = 52/163 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++T P ED C C C + CP+ WN+ + L P +L+ Sbjct: 281 METADPDTDAFGAGKIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLLIMGL 338 Query: 201 R-------------------------WLIDSRDEFQG----------------------- 212 R D + Sbjct: 339 RDHGFAKAPYLLAGGSTDMGGDETGLVDADGNPDETKLGKIPAEARAEAARPLVGPAGEG 398 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L + DP L+ C T C + CP + I ++ + Sbjct: 399 DDLGGVIDPEVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQV 441 >gi|269127480|ref|YP_003300850.1| hypothetical protein Tcur_3273 [Thermomonospora curvata DSM 43183] gi|268312438|gb|ACY98812.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermomonospora curvata DSM 43183] Length = 430 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + R+ + +CV C C +CP+Y P + + ++ Sbjct: 1 MTSASREPASLIGDCVHCGFCLPTCPTYVLWGQEMDSPRGRIHLMKQHLEGEPLGPAMV- 59 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC M C SCP G+ + I + + Sbjct: 60 ------EHFDRCLGCMACVTSCPSGVRYDRLIETTRQQV 92 >gi|322417921|ref|YP_004197144.1| hypothetical protein GM18_0381 [Geobacter sp. M18] gi|320124308|gb|ADW11868.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 661 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C CA C CP++ D+ L P L+Q + ++ E L Sbjct: 283 WKDIFDADACTGCARCQDRCPAHTT--DKPLSPMKLIQQIGTVAEATPEAS---LVETIG 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C T C CP I +++ L Sbjct: 338 QDAIWSCTTCRACQDICPANNEHVNKIIELRRNL 371 >gi|55379251|ref|YP_137101.1| heterodisulfide reductase [Haloarcula marismortui ATCC 43049] gi|55231976|gb|AAV47395.1| heterodisulfide reductase [Haloarcula marismortui ATCC 43049] Length = 693 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 10/130 (7%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPA 194 + P + +D L C C CS+ CP+ S R L P Sbjct: 269 AGVRLPGVPSDASPEEIGPSDIDDFSWKQLLDHDACTKCGRCSSVCPAKA--SGRPLDPR 326 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLE------DPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++ + + RD + + D + C + M C +CP + Sbjct: 327 NVILDLKRYREERDAGGEDVPIIADGGTSVIDAHTMESCMSCMACMDACPVDIEHVTQFT 386 Query: 249 KIKMMLLDRK 258 ++ L + Sbjct: 387 EMNRRLTEAG 396 >gi|145592620|ref|YP_001156917.1| hypothetical protein Strop_0054 [Salinispora tropica CNB-440] gi|145301957|gb|ABP52539.1| protein of unknown function DUF224, cysteine-rich region domain protein [Salinispora tropica CNB-440] Length = 732 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 42/154 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P+ + + E C C C + CP+ WN+ + L P +L+ + Sbjct: 271 FEEADPEKDQFGVAQVEQFTWKGLLDFSTCTECGRCQSQCPA--WNTGKPLSPKLLVLSL 328 Query: 201 RWLID----------SRDEFQGERLDN--------------------------LEDPFRL 224 R +D E+ + + DP L Sbjct: 329 RDHAYAKAPYLLAGGGKDLTGAEKAADGQLAHVDALALAEAEKPLIGGVEESGVIDPDVL 388 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKM--MLLD 256 + C T C + CP + I ++ ML++ Sbjct: 389 WSCTTCGACVEQCPVDIEHVDHIVDMRRYQMLIE 422 >gi|316931987|ref|YP_004106969.1| hypothetical protein Rpdx1_0598 [Rhodopseudomonas palustris DX-1] gi|315599701|gb|ADU42236.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodopseudomonas palustris DX-1] Length = 435 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + +++ + +++++ R Sbjct: 22 LRACVHCGFCTATCPTYLLLGDEADSPRGRIYLIKDMLEEEKPATPQVVEHID------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C T ++C +CP G++ + + + Sbjct: 76 CLTCLSCMTTCPSGVHYMHLVDHARAHIAR 105 >gi|167567567|ref|ZP_02360483.1| glycolate oxidase iron-sulfur subunit [Burkholderia oklahomensis EO147] Length = 114 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + GP + + +++ G RL L R Sbjct: 22 LRACVHCGFCNATCPTYQLLGNELDGPRGRIYLIKQVLEGEPVTDGTRL-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + NC +CP G+ A+ I ++R+ Sbjct: 75 CLSCRNCETTCPSGVRY-HALLDIGRAEVERR 105 >gi|254237916|ref|ZP_04931239.1| hypothetical protein PACG_04019 [Pseudomonas aeruginosa C3719] gi|126169847|gb|EAZ55358.1| hypothetical protein PACG_04019 [Pseudomonas aeruginosa C3719] Length = 653 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + + + Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGTDAKFAGSPYPGK 293 Query: 212 --------------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|296128075|ref|YP_003635325.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cellulomonas flavigena DSM 20109] gi|296019890|gb|ADG73126.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cellulomonas flavigena DSM 20109] Length = 774 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 31/104 (29%), Gaps = 18/104 (17%) Query: 168 YECVMCACCSTSCPSYWWNS------------DRYLGPAILLQAYRWLIDSRDEFQGERL 215 C C C CP++ D+ A ++A R S + L Sbjct: 314 ATCTECGRCQDQCPAWATGKPLSPKLLTLALRDQAAATAPYVRAARAAGASPEAAADPHL 373 Query: 216 DN------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + DP L+ C C Q CP + I I+ Sbjct: 374 GVDLVASGVIDPDVLWACTMCGACVQQCPVDIEHVDTIVDIRRY 417 >gi|317123975|ref|YP_004098087.1| hypothetical protein Intca_0828 [Intrasporangium calvum DSM 43043] gi|315588063|gb|ADU47360.1| protein of unknown function DUF224 cysteine-rich region domain protein [Intrasporangium calvum DSM 43043] Length = 470 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +CV C C +CP+Y + P + + C Sbjct: 48 ADCVHCGFCLPTCPTYALWGEEMDSPRGRIYLMNEGLQGEPMTPSMV-------QHFDAC 100 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 M C +CP G+ + I + + Sbjct: 101 LGCMACVTACPSGVQYDRLIEATRAQV 127 >gi|260462667|ref|ZP_05810873.1| protein of unknown function DUF224 cysteine-rich region domain protein [Mesorhizobium opportunistum WSM2075] gi|259031573|gb|EEW32843.1| protein of unknown function DUF224 cysteine-rich region domain protein [Mesorhizobium opportunistum WSM2075] Length = 441 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L + + L +CV C C+ +CP+Y + P + + D + + Sbjct: 9 QLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIY---LIKDMLENGRPA 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + RC + + C +CP G+N + + + + Sbjct: 66 DKAIVT---HIDRCLSCLACMTTCPSGVNYMHLVDHARAHIEE 105 >gi|254514895|ref|ZP_05126956.1| iron-sulfur cluster binding protein [gamma proteobacterium NOR5-3] gi|219677138|gb|EED33503.1| iron-sulfur cluster binding protein [gamma proteobacterium NOR5-3] Length = 473 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 19/141 (13%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY- 183 + S + R + + + +S + +C+ C C CP Y Sbjct: 270 VSCYTSFYAGPRRPGDVDGPVETHFVLLDNHRSEILASDYAEMLQCIRCGACLNHCPVYM 329 Query: 184 ----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCP 238 Y GP + L +LED L C C + CP Sbjct: 330 NAGGHAYGWVYPGPMGSVL-------------TPLLTSLEDSAHLPDACTACGRCEEVCP 376 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 + + ++ ++++ Sbjct: 377 ASIPLPDLLRDLRRDKFEQRV 397 >gi|224824416|ref|ZP_03697524.1| protein of unknown function DUF224 cysteine-rich region domain protein [Lutiella nitroferrum 2002] gi|224603835|gb|EEG10010.1| protein of unknown function DUF224 cysteine-rich region domain protein [Lutiella nitroferrum 2002] Length = 633 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 17/112 (15%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAI-LLQAYRWLIDS--- 206 ++ CV C C +CP+Y D G A AY Sbjct: 236 AWNRLLSFDACVQCGKCEAACPAYAAGQPLNPKKLIQDMVTGMAAGSGPAYAGNPHPGQA 295 Query: 207 ----RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + L DP L+ C T C + CP + + ++ + Sbjct: 296 GKVRQGNPHQPIVGGLLDPETLWSCTTCRACVEECPMLIEHVDTVVSLRRHV 347 >gi|46198435|ref|YP_004102.1| (S)-2-hydroxy-acid oxidase subunit glcF [Thermus thermophilus HB27] gi|46196057|gb|AAS80475.1| (S)-2-hydroxy-acid oxidase subunit glcF [Thermus thermophilus HB27] Length = 418 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 7/105 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E + CV C C +CP+Y + P + + +++ Sbjct: 1 MQHQIPIEKLGKEGEVMAHAIEACVHCGFCLPTCPTYVVLQEEMDSPRGRIFLMKEVLEG 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + E L L+ RC C +CP G+ + IA + Sbjct: 61 NLKL-EEALPYLD------RCLACQACVTACPSGVPYGELIATFR 98 >gi|118616395|ref|YP_904727.1| iron-sulphur-binding reductase [Mycobacterium ulcerans Agy99] gi|118568505|gb|ABL03256.1| iron-sulphur-binding reductase [Mycobacterium ulcerans Agy99] Length = 982 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 57/222 (25%), Gaps = 62/222 (27%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 + + + + ++ P K L + +P Sbjct: 211 TTALLAHIAVMLAFLIIVLHSKHLHIFLAPINVTFKRLPDGLGPLLPVEADGKPVDFENP 270 Query: 148 PKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P A ED C C C + CP+ WN+ + L P ++ ++D Sbjct: 271 PDDAIFGRGKIEDFTWKGMLDFATCTECGRCQSQCPA--WNTGKPLSPKLV------IMD 322 Query: 206 SRD-----------EFQGERLDNLE----------------------------------- 219 RD E + L+ L+ Sbjct: 323 LRDHWMAKAPYILGEKTADLLEGLDLETAAGEGHHVPESGFGRVPGDGPEQAARPLVGTA 382 Query: 220 ------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C + C + CP + I ++ + Sbjct: 383 EQGGVIDPDVLWSCVSCGACVEQCPVDIEHIDHIVDMRRYQV 424 >gi|15888009|ref|NP_353690.1| glycolate oxidase iron-sulfur subunit [Agrobacterium tumefaciens str. C58] gi|15155623|gb|AAK86475.1| glycolate oxidase iron-sulfur subunit [Agrobacterium tumefaciens str. C58] Length = 433 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTSFTSEQLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + +++ RC + + CT +CP G++ + + + Sbjct: 62 SRPADREVVTHID------RCLSCLACTTTCPSGVDYMHLVDHARAHI 103 >gi|91773481|ref|YP_566173.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcoides burtonii DSM 6242] gi|91712496|gb|ABE52423.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanococcoides burtonii DSM 6242] Length = 164 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 15/91 (16%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C+ SCPS G L L + + +++ L+ C Sbjct: 22 KCMHCGVCTGSCPS---------GRHTSLNVRNLL------RKARKGESVLSDETLWTCT 66 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T NC + CP+G++ AI +I+ + + I Sbjct: 67 TCYNCQERCPRGIDIVDAIFEIRAIAVHEGI 97 >gi|219848434|ref|YP_002462867.1| hypothetical protein Cagg_1528 [Chloroflexus aggregans DSM 9485] gi|219542693|gb|ACL24431.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aggregans DSM 9485] Length = 465 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 5/120 (4%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + +P + S +D+ D + CV C C +SCP+Y P + Sbjct: 3 VTQSSPASAPPVIPLIGFSVKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIY 62 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + R C C CP G+ + + + + Sbjct: 63 LMKAVDEGRISLASPVFQEQMS-----LCLNCRACEAVCPSGVQYGAILEASRAQIEQAR 117 >gi|332668849|ref|YP_004451857.1| hypothetical protein Celf_0325 [Cellulomonas fimi ATCC 484] gi|332337887|gb|AEE44470.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cellulomonas fimi ATCC 484] Length = 746 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 35/115 (30%), Gaps = 26/115 (22%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN--- 217 +++ C C C CP+ W + + L P +++ + R L Sbjct: 304 WKQLLDTATCTECGRCQDQCPA--WATGKPLSPKLVMLSLRDHA----AATAPYLRAAAA 357 Query: 218 -----------------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D L+ C T C Q CP + I I+ + Sbjct: 358 AGADADPHAGIDLVGSGVIDAEALWDCTTCGACVQQCPVDIEHVDTILDIRRYQV 412 >gi|126459997|ref|YP_001056275.1| ferredoxin [Pyrobaculum calidifontis JCM 11548] gi|126249718|gb|ABO08809.1| ferredoxin [Pyrobaculum calidifontis JCM 11548] Length = 104 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL 98 G Y+VD D M LD L+ I+ +D +L+ R +CR G+CG+C + I+G L Sbjct: 11 KDGVSYDQVYHVDADPRATM-LDVLINIREDLDGSLSFRYACRMGVCGACAVKINGKPAL 69 Query: 99 ACV-KDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 AC K M I + P+ ++IKDL+VD Sbjct: 70 ACTVKLMDLGTTNIYIEPISDKNIIKDLIVDFE 102 >gi|159045434|ref|YP_001534228.1| hypothetical protein Dshi_2894 [Dinoroseobacter shibae DFL 12] gi|157913194|gb|ABV94627.1| hypothetical protein Dshi_2894 [Dinoroseobacter shibae DFL 12] Length = 434 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTHFTPEQLKDPATARSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + +R + + + RC + + C +CP G++ + + + Sbjct: 57 -DMIENDRPADPQTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYI 103 >gi|86609621|ref|YP_478383.1| glycolate oxidase, iron-sulfur subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558163|gb|ABD03120.1| glycolate oxidase, iron-sulfur subunit, putative [Synechococcus sp. JA-2-3B'a(2-13)] Length = 436 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 6/92 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + CV C C T+CPSY P + L + + + Sbjct: 13 DPPDPKLIDACVHCGFCLTTCPSYRVIGKETDSPRGRIYQMDALNQGQISLSAAVVSH-- 70 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ + IA + Sbjct: 71 ----FDSCLGCLACVTACPSGVQYDRLIAATR 98 >gi|196250285|ref|ZP_03148978.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] gi|196210174|gb|EDY04940.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] Length = 454 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWL 203 + + ++ ++R D L C+ C C SCP+Y + P + + + Sbjct: 1 MTTKTEQAHIQKAFQERMDEDELMNCMRCGFCLPSCPTYIESGQQETQSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D E E L C C Q CP G+ + + + ++ K Sbjct: 61 VDGLIEPDEEV------ERSLSLCLGCRACEQVCPSGVRYGHLLEEARNIIAQHK 109 >gi|146305531|ref|YP_001185996.1| hypothetical protein Pmen_0494 [Pseudomonas mendocina ymp] gi|145573732|gb|ABP83264.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pseudomonas mendocina ymp] Length = 653 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 40/121 (33%), Gaps = 25/121 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ G CV C C CP++ + L P L+Q + ++ Q Sbjct: 236 WNQLLGFDACVQCGKCEAMCPAFAA--GQPLNPKKLIQDMVIGLAGGNDAQFAGSPYPGK 293 Query: 212 --GERL------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 GE L D L+ C T C + CP + AI ++ L Sbjct: 294 PLGEHSGGPHQPIVSLQGKALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLE 353 Query: 258 K 258 K Sbjct: 354 K 354 >gi|148658550|ref|YP_001278755.1| hypothetical protein RoseRS_4473 [Roseiflexus sp. RS-1] gi|148570660|gb|ABQ92805.1| protein of unknown function DUF224, cysteine-rich region domain protein [Roseiflexus sp. RS-1] Length = 435 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L +C+ C C +CP+Y P + R + + + +R++ Sbjct: 13 YRKKLDQCIHCGLCLQACPTYDVFGTEMDSPRGRIALMRAVHEG--KIAEDRINGAFATH 70 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + RC C +CP G+ + + ++ Sbjct: 71 -ITRCLACRACETACPSGVQYGALLEPARELV 101 >gi|288931760|ref|YP_003435820.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894008|gb|ADC65545.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 163 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 14/95 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C+ C C SCPS G L R + D + +E+ Sbjct: 20 RMNLNSCIQCGTCIASCPS---------GRITALNTRRIIADFISSGKK-----VEERDE 65 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C T C + CP+G+ + + + L+ K Sbjct: 66 IWFCVTCYACQERCPRGIEITDTLIEARRTLVKNK 100 >gi|229917087|ref|YP_002885733.1| hypothetical protein EAT1b_1361 [Exiguobacterium sp. AT1b] gi|229468516|gb|ACQ70288.1| protein of unknown function DUF224 cysteine-rich region domain protein [Exiguobacterium sp. AT1b] Length = 708 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 34/122 (27%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI--------------------- 204 LY CV C C+ CP+ + + L P L+ R + Sbjct: 283 DLYACVECGRCTNVCPA--TGTGKMLSPMDLIVKLRDHMNMKGAAVTRKSPWAPALMFQN 340 Query: 205 -----------DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D E + N+ ++ C T NC CP I ++ Sbjct: 341 TQGAEIAAAAQDGHMLVADELIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRY 400 Query: 254 LL 255 L+ Sbjct: 401 LV 402 >gi|51891232|ref|YP_073923.1| iron-sulphur protein [Symbiobacterium thermophilum IAM 14863] gi|51854921|dbj|BAD39079.1| conserved hypothetical iron-sulphur protein [Symbiobacterium thermophilum IAM 14863] Length = 486 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 19/95 (20%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y Y GP + +D DE Sbjct: 319 CIRCGACLNACPVYRQLGGHAYGSVYPGPIGTVLTPLLQGLDPWDEL------------- 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C CT++CP G+ K I ++ + R Sbjct: 366 LQYCSLCGACTENCPLGIQLHKHIIHLRGEAVARG 400 >gi|332710470|ref|ZP_08430417.1| Fe-S oxidoreductase [Lyngbya majuscula 3L] gi|332350801|gb|EGJ30394.1| Fe-S oxidoreductase [Lyngbya majuscula 3L] Length = 446 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + K + + CV C C ++CPSY P + + Sbjct: 18 QKPPKQELIDACVHCGFCLSTCPSYRVLGKEMDSPRGRIYLMNAISQGEAPLAE------ 71 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + C +CP G+ K I+ + + Sbjct: 72 GSTQHFDSCLGCLACVTTCPSGVEYDKLISATRHQV 107 >gi|226227871|ref|YP_002761977.1| iron-sulfur binding protein [Gemmatimonas aurantiaca T-27] gi|226091062|dbj|BAH39507.1| iron-sulfur binding protein [Gemmatimonas aurantiaca T-27] Length = 684 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 45/160 (28%), Gaps = 21/160 (13%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL----YECVM 172 H+ V+ L+ S I E + + Y C Sbjct: 225 KHLHVLSSLINVWLSNTSGPGRIGAMKPMDLEAEDAEQFGAADIEHLSWKNLLDGYSCTE 284 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRW---------LIDSRDEFQGE--------RL 215 C C+ +CP+ ++ R + E L Sbjct: 285 CGRCTAACPANTTGKLLSPRMIVVKTRARLTEKASTLDAIAAGGGTATEEQQAVLDKNLL 344 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D+ L+ C + C Q CP ++ + I +++ L+ Sbjct: 345 DDWITEEELWACTSCRACVQECPVSIDQLEIINELRRDLM 384 >gi|240139901|ref|YP_002964378.1| glycolate oxidase iron-sulfur subunit [Methylobacterium extorquens AM1] gi|240009875|gb|ACS41101.1| glycolate oxidase iron-sulfur subunit [Methylobacterium extorquens AM1] Length = 465 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPASREVVKHID------RCLSCLSCMTTCPSGVHYMHLVDHARTHIEK 105 >gi|227540820|ref|ZP_03970869.1| possible Fe-S dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183352|gb|EEI64324.1| possible Fe-S dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] Length = 892 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C C C CP+ WN+ + L P + + D RD L+ +D L+ Sbjct: 284 DAHTCTECNRCQDLCPA--WNTGKPLSPRKV------ITDIRDG-----LEITDDV--LW 328 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C + CP + +A ++ + Sbjct: 329 SCTNCGACVEQCPVDIEHIDHVANLRRYRV 358 >gi|227489231|ref|ZP_03919547.1| possible Fe-S dehydrogenase [Corynebacterium glucuronolyticum ATCC 51867] gi|227090762|gb|EEI26074.1| possible Fe-S dehydrogenase [Corynebacterium glucuronolyticum ATCC 51867] Length = 865 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C C C CP+ WN+ + L P + + D RD L+ +D L+ Sbjct: 286 DAHTCTECNRCQDLCPA--WNTGKPLSPRKV------ITDIRDG-----LEITDDV--LW 330 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C + CP + +A ++ + Sbjct: 331 SCTNCGACVEQCPVDIEHIDHVANLRRYRV 360 >gi|218531407|ref|YP_002422223.1| hypothetical protein Mchl_3475 [Methylobacterium chloromethanicum CM4] gi|218523710|gb|ACK84295.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium chloromethanicum CM4] Length = 465 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPASREVVKHID------RCLSCLSCMTTCPSGVHYMHLVDHARTHIEK 105 >gi|220920714|ref|YP_002496015.1| hypothetical protein Mnod_0680 [Methylobacterium nodulans ORS 2060] gi|219945320|gb|ACL55712.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium nodulans ORS 2060] Length = 447 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFTPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + ++C +CP G++ + + + Sbjct: 62 AKPATPQVVKHID------RCLSCLSCMTTCPSGVHYMHLVDHARAYI 103 >gi|145590990|ref|YP_001152992.1| hypothetical protein Pars_0754 [Pyrobaculum arsenaticum DSM 13514] gi|145282758|gb|ABP50340.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 643 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 7/93 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C+ C CP++ P + + ++ + + + Sbjct: 273 HGIMFDACTRCSRCQDVCPAFAAK-----RPLSPMSLITKIAEA--KNDADLFEVGITED 325 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C CP + I ++ L+ Sbjct: 326 EVWACTTCGACMYQCPVYIRHVDYIVDLRRALV 358 >gi|254562325|ref|YP_003069420.1| glycolate oxidase iron-sulfur subunit [Methylobacterium extorquens DM4] gi|254269603|emb|CAX25574.1| glycolate oxidase iron-sulfur subunit [Methylobacterium extorquens DM4] Length = 465 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPASREVVKHID------RCLSCLSCMTTCPSGVHYMHLVDHARTHIEK 105 >gi|163852567|ref|YP_001640610.1| hypothetical protein Mext_3151 [Methylobacterium extorquens PA1] gi|163664172|gb|ABY31539.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium extorquens PA1] Length = 465 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A E L L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G++ + + + Sbjct: 62 GKPASREVVKHID------RCLSCLSCMTTCPSGVHYMHLVDHARTHIEK 105 >gi|224367443|ref|YP_002601606.1| HdrF1 [Desulfobacterium autotrophicum HRM2] gi|223690159|gb|ACN13442.1| HdrF1 [Desulfobacterium autotrophicum HRM2] Length = 567 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 13/125 (10%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW-N 186 F + + A L D +++ CV C C+ +CP + Sbjct: 433 YTQVFDTSLDQWTGQARPSQEPGAMACLPGLAD--QVESFENCVQCTICTNACPVVAYDP 490 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 LGP ++ R + + ++ C T C + CP+G+ Sbjct: 491 GGTDLGPHQVMNLLRL----------GKKEMATASPMVWNCLTCYACQELCPQGIRITDI 540 Query: 247 IAKIK 251 + +++ Sbjct: 541 LLELR 545 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 10/121 (8%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC---PSYWWNS 187 F I + + + + L+ L C C CS C P++ Sbjct: 301 PFSRLFHIIAIPVASTRKRVTPQSLEQERGVLDFFSLMACTNCGFCSQVCNVYPNFQITG 360 Query: 188 DRYLGPAILLQAYRWLIDS--RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + P + ++A R + + +D L + D C C CP G++ + Sbjct: 361 NAGILPHVKIEAIRTMAEKGLKDPRAAVLLRSGNDD-----CTRCGRCGDICPAGIDLVR 415 Query: 246 A 246 Sbjct: 416 V 416 >gi|294084293|ref|YP_003551051.1| hypothetical protein SAR116_0724 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663866|gb|ADE38967.1| protein of unknown function DUF224, cysteine-rich region [Candidatus Puniceispirillum marinum IMCC1322] Length = 429 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L + ++ D L +CV C C+ +CP++ D P + R L++S Sbjct: 2 QTHFSLEQLSDPKIKEANDILRKCVHCGFCTATCPTFVETGDERDSPRGRIWLMRELLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + L RC +C +CP G++ + + + Sbjct: 62 PETVSK------DTRHHLDRCLGCQSCMTTCPSGVDYVHLLDIGREKI 103 >gi|297530266|ref|YP_003671541.1| hypothetical protein GC56T3_1979 [Geobacillus sp. C56-T3] gi|297253518|gb|ADI26964.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. C56-T3] Length = 453 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D +CV C C SCP+Y + P + + + + + E + LD Sbjct: 24 RFHDLPDPSKWADCVHCGMCLESCPTYEQTGEEQHSPRGRVHLMKSVGEGKLELTPDLLD 83 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ L Sbjct: 84 P------IFTCLDCRACTTACPADVDVGGLIEQVRGQL 115 >gi|220935953|ref|YP_002514852.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997263|gb|ACL73865.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 417 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 6/97 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ CVMC C CP+Y + P + + L R E +L+ Sbjct: 3 HRLKDTDRCVMCGLCLPHCPTYGLSRQEGDSPRGRISLMQGLASGRLEADDRVSAHLD-- 60 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP G+ + + + + +L +++ Sbjct: 61 ----GCLECRACESVCPSGVPFGRLMDEARALLREQR 93 >gi|255037765|ref|YP_003088386.1| oxidoreductase, Fe-S subunit [Dyadobacter fermentans DSM 18053] gi|254950521|gb|ACT95221.1| oxidoreductase, Fe-S subunit [Dyadobacter fermentans DSM 18053] Length = 447 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 25/109 (22%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + Y C C C+ +CP+ + + L P + ++D+RD + + L + Sbjct: 299 WKNLMDAYSCTECGRCTAACPAN--MTGKKLSPR------KIMMDTRDRLEDIGRNMLAN 350 Query: 221 -----------------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + C T C Q CP +NP I +++ Sbjct: 351 KGEFVPDNKSLLGDYILEEEILACTTCNACVQECPVLINPLDIILQLRR 399 >gi|154245812|ref|YP_001416770.1| hypothetical protein Xaut_1868 [Xanthobacter autotrophicus Py2] gi|154159897|gb|ABS67113.1| protein of unknown function DUF224 cysteine-rich region domain protein [Xanthobacter autotrophicus Py2] Length = 439 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTHFSLAQLADPHVAEAEKILRTCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + +++ RC + ++C +CP G+N + + + Sbjct: 62 DRPATEQEVKHID------RCLSCLSCMTTCPSGVNYMHLVDQAR 100 >gi|227820974|ref|YP_002824944.1| glycolate oxidase, iron-sulphur subunit [Sinorhizobium fredii NGR234] gi|227339973|gb|ACP24191.1| glycolate oxidase, iron-sulphur subunit [Sinorhizobium fredii NGR234] Length = 431 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++E L + L +CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFSREQLADPHVAESEKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + +++ RC + ++C +CP G++ + + Sbjct: 62 GRAADAETVTHID------RCLSCLSCMTTCPSGVDYMHLVDHAR 100 >gi|217978679|ref|YP_002362826.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylocella silvestris BL2] gi|217504055|gb|ACK51464.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylocella silvestris BL2] Length = 432 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 14/101 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP++ D P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTFTLLGDELDSPRGRIYLIKEMLENGRPADSETVKHID------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK--------MMLLDRKI 259 C + ++C +CP G+N + + + L DR + Sbjct: 76 CLSCLSCMTTCPSGVNYMHLVDEARVRIEETYKRPLADRAL 116 >gi|269837017|ref|YP_003319245.1| hypothetical protein Sthe_0987 [Sphaerobacter thermophilus DSM 20745] gi|269786280|gb|ACZ38423.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sphaerobacter thermophilus DSM 20745] Length = 440 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 9/101 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + CV C C SCP+Y P + + E RLD L+ Sbjct: 17 DVPSTEVIRSCVHCGLCLPSCPTYVITRRERSSPRGRIWLMK-------EVSEGRLDLLD 69 Query: 220 D--PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C C CP G+ + + + + + Sbjct: 70 PLFEEEMYLCLNCRACEAVCPSGVKYGEILEASRAQIEQAR 110 >gi|114705743|ref|ZP_01438646.1| glycolate oxidase subunit, (Fe-S)protein [Fulvimarina pelagi HTCC2506] gi|114538589|gb|EAU41710.1| glycolate oxidase subunit, (Fe-S)protein [Fulvimarina pelagi HTCC2506] Length = 447 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + E + +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLDNPEVAHSEGIIRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKEMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + +++ RC + + C +CP +N + + + Sbjct: 62 DRPADKEVVTHID------RCLSCLACITTCPADVNYMHLVDHARNHI 103 >gi|332971452|gb|EGK10406.1| Fe-S dehydrogenase [Desmospora sp. 8437] Length = 713 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 36/130 (27%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL---------------------LQ 198 D++ + LY CV C C+ CP+ + L P L + Sbjct: 279 DQKDLIDLYACVECGRCTNVCPASGT--GKMLSPMDLLVKMRDHLTEKGAAITSKSPWMP 336 Query: 199 AYRW--------LIDSRDEFQG-----ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 AY + + +R+E G E + ++ L+ C T NC +CP Sbjct: 337 AYAFSGANTATEVAVTREEGGGYEYPVELIGDVITEEELWACTTCRNCEDACPVSNEHVG 396 Query: 246 AIAKIKMMLL 255 I ++ L+ Sbjct: 397 KIIDMRRHLV 406 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P + K++ L ++ Sbjct: 286 LYACVECGRCTNVCPASGTGKMLSPMDLLVKMRDHLTEKG 325 >gi|307354604|ref|YP_003895655.1| CoB/CoM heterodisulfide reductase subunit C [Methanoplanus petrolearius DSM 11571] gi|307354610|ref|YP_003895661.1| CoB/CoM heterodisulfide reductase subunit C [Methanoplanus petrolearius DSM 11571] gi|307157837|gb|ADN37217.1| CoB/CoM heterodisulfide reductase, subunit C [Methanoplanus petrolearius DSM 11571] gi|307157843|gb|ADN37223.1| CoB/CoM heterodisulfide reductase, subunit C [Methanoplanus petrolearius DSM 11571] Length = 194 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 13/120 (10%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + + + ++ + C C C+ SCPS P + Sbjct: 15 KLADRNYYTSDSHKDFSKRVEKISGTMSHMCFQCGTCTGSCPSA---------PRSSYRI 65 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ R G + L DP L+ C T +C+ CP+ L P I ++ + +R I Sbjct: 66 RLFM---RRAVLGLEDEALTDPD-LWLCTTCYSCSDRCPRDLFPTDVIMAMRNLAFERDI 121 >gi|269925283|ref|YP_003321906.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269788943|gb|ACZ41084.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 447 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 11/100 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + +C+ C C +CP+Y + P + + ++ D L Sbjct: 25 EPPSRELIDDCIHCGFCLPTCPTYLLWGEEMDSPRGRIYLMKAALNG---------DPLT 75 Query: 220 DPFRL-YR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D L + C M C +CP G+ + I + + R Sbjct: 76 DSMVLHWDLCLGCMACVTACPSGVKYDRLIEDTRYQVERR 115 >gi|54633800|gb|AAV36010.1| hydrogenosomal succinate dehydrogenase beta subunit [Nyctotherus ovalis] Length = 99 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 3/99 (3%) Query: 84 ICGSCGMNIDGTNTLACVK-DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNIDG + LAC K+ V PL M+V+KDLVVDMS+FY+Q++ I+P+ Sbjct: 1 ICGSCAMNIDGRHNLACTTAIPKNNLEKSFVAPLTFMNVLKDLVVDMSNFYNQYKVIQPF 60 Query: 143 LKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 LK +P KE QS EDR KIDGLYECV+CA CS+S Sbjct: 61 LKRKTPKKPGDKEYYQSAEDRAKIDGLYECVLCASCSSS 99 >gi|261419772|ref|YP_003253454.1| hypothetical protein GYMC61_2368 [Geobacillus sp. Y412MC61] gi|319766588|ref|YP_004132089.1| hypothetical protein GYMC52_1496 [Geobacillus sp. Y412MC52] gi|261376229|gb|ACX78972.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y412MC61] gi|317111454|gb|ADU93946.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y412MC52] Length = 453 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D +CV C C SCP+Y + P + + + + + E + LD Sbjct: 24 RFHDLPDPSKWADCVHCGMCLESCPTYEQTGEEQHSPRGRVHLMKSVGEGKLELTPDLLD 83 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ L Sbjct: 84 P------IFTCLDCRACTTACPADVDVGGLIEQVRGQL 115 >gi|325524412|gb|EGD02491.1| glycolate oxidase iron-sulfur subunit [Burkholderia sp. TJI49] Length = 128 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + + + + L +CV C C+ +CP+Y D GP + + +++ Sbjct: 2 QTNLADFIRDTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + R L RC T +C +CP G+ + + +I ++ ++ Sbjct: 62 ---AKVTR----STQQHLDRCLTCRSCETTCPSGVQYGRLV-EIGRKHVEAQV 106 >gi|152996736|ref|YP_001341571.1| hypothetical protein Mmwyl1_2723 [Marinomonas sp. MWYL1] gi|150837660|gb|ABR71636.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinomonas sp. MWYL1] Length = 641 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 39/140 (27%), Gaps = 17/140 (12%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW---------- 185 + ++ + + ++ G CV C C CP++ Sbjct: 215 LKPVDFGDGVSVKEVHGVAKPTDFKWNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLI 274 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGER-------LDNLEDPFRLYRCHTIMNCTQSCP 238 + Y E + + L +P L+ C T C + CP Sbjct: 275 QDMVVGFAGGTDEKYAGSPYPGVEVGNAKGAPNQIITNGLVNPDTLWSCTTCRACVEECP 334 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 + AI ++ L K Sbjct: 335 MMIEHVDAIVDMRRFLTLEK 354 >gi|167839027|ref|ZP_02465804.1| iron-sulfur cluster binding protein [Burkholderia thailandensis MSMB43] Length = 641 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASDQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIAV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GKHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|55980472|ref|YP_143769.1| glycolate oxidase iron-sulfur subunit GlcF [Thermus thermophilus HB8] gi|55771885|dbj|BAD70326.1| glycolate oxidase iron-sulfur subunit GlcF [Thermus thermophilus HB8] Length = 418 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 7/94 (7%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + CV C C +CP+Y + P + + +++ + E L Sbjct: 12 KEGEVMAHAVEACVHCGFCLPTCPTYVVLQEEMDSPRGRIFLMKEVLEG-NLGLEEALPY 70 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L+ RC C +CP G+ + IA + Sbjct: 71 LD------RCLACQACVTACPSGVPYGELIATFR 98 >gi|313676844|ref|YP_004054840.1| oxidoreductase, fe-s subunit [Marivirga tractuosa DSM 4126] gi|312943542|gb|ADR22732.1| oxidoreductase, Fe-S subunit [Marivirga tractuosa DSM 4126] Length = 437 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 24/113 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + Y C C C+ CP+ + L P + ++D+RD Sbjct: 292 WVNLMNAYACTECGRCTAECPANIT--GKKLSPR------KIMMDTRDRITEIGDNIKAG 343 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E D+ L C + C ++CP +NP I + + + Sbjct: 344 KEAEEGSPLFSDDYISAEELNACTSCNACVEACPININPLDIILQGRRYMAME 396 >gi|163732528|ref|ZP_02139973.1| glycolate oxidase, iron-sulfur subunit [Roseobacter litoralis Och 149] gi|161393888|gb|EDQ18212.1| glycolate oxidase, iron-sulfur subunit [Roseobacter litoralis Och 149] Length = 441 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTNFSDAQLAQPAIKRSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + +R + + + RC + + C +CP G++ + + + R Sbjct: 57 -DMLENDRDPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARDYIEKR 106 >gi|150395621|ref|YP_001326088.1| hypothetical protein Smed_0396 [Sinorhizobium medicae WSM419] gi|150027136|gb|ABR59253.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sinorhizobium medicae WSM419] Length = 430 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + E L + L +CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFSPEQLADPHVAESETILRKCVHCGFCTATCPTYVVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + +++ RC + ++C +CP G++ + + Sbjct: 62 GRAADTETVTHID------RCLSCLSCMTTCPSGVDYMHLVDHAR 100 >gi|56698303|ref|YP_168676.1| glycolate oxidase, iron-sulfur subunit [Ruegeria pomeroyi DSS-3] gi|56680040|gb|AAV96706.1| glycolate oxidase, iron-sulfur subunit [Ruegeria pomeroyi DSS-3] Length = 440 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L CV C C+ +CP+Y D P + + D + R+ + + Sbjct: 19 NEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK------DMLENSRIPDAKTVKH 72 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + RC + + C +CP G++ + + + Sbjct: 73 IDRCLSCLACMTTCPSGVHYMHLVDHAREYI 103 >gi|218458038|ref|ZP_03498129.1| putative glycolate oxidase iron-sulfur subunit [Rhizobium etli Kim 5] Length = 187 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPTQLLDPDVAASEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTCPSGVDYMHLVDHARAHIEK 105 >gi|206890810|ref|YP_002249172.1| heterodisulfide reductase subunit C [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742748|gb|ACI21805.1| heterodisulfide reductase subunit C [Thermodesulfovibrio yellowstonii DSM 11347] Length = 178 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 12/91 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L EC+ C C+++CP + I+ A L D L + ++ Sbjct: 29 ELRECIQCGKCASTCP-MALAGLEFFIKRIIHAANLGLRD-----------ILLEDSSVW 76 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + C + CP + P + I ++ + Sbjct: 77 GCQSCNRCVEVCPMDIKPYEVIQAVRRAAVK 107 >gi|330898352|gb|EGH29771.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 102 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D GP + + +++ + + R+ L R Sbjct: 22 LRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQPVTEKTRV-------HLDR 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + NC +CP G++ + I + Sbjct: 75 CLSCRNCETTCPSGVDYHNLL-DIGRAAV 102 >gi|319782243|ref|YP_004141719.1| hypothetical protein Mesci_2526 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168131|gb|ADV11669.1| protein of unknown function DUF224 cysteine-rich region domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 441 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L + L +CV C C+ +CP+Y + P + + D + + Sbjct: 9 QLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIY---LIKDMLENGRPA 65 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + RC + + C +CP G+N + + + + Sbjct: 66 DKQIVT---HIDRCLSCLACMTTCPSGVNYMHLVDHARAHIQE 105 >gi|254512026|ref|ZP_05124093.1| glycolate oxidase, iron-sulfur subunit [Rhodobacteraceae bacterium KLH11] gi|221535737|gb|EEE38725.1| glycolate oxidase, iron-sulfur subunit [Rhodobacteraceae bacterium KLH11] Length = 437 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K+ L+ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTKDQLRDPAIQRSNEILRNCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARDYI 103 >gi|303247174|ref|ZP_07333448.1| protein of unknown function DUF162 [Desulfovibrio fructosovorans JJ] gi|302491333|gb|EFL51221.1| protein of unknown function DUF162 [Desulfovibrio fructosovorans JJ] Length = 474 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + D D + Sbjct: 309 KCIRCGACLNVCPVYQSVGGHAYGSVYPGPMGSILSSVL------------KDAAGDARQ 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C ++CP G++ + +++ + Sbjct: 357 PFACTHCGACAEACPAGIDHPVLLQELRRRQAAQG 391 >gi|114330466|ref|YP_746688.1| hypothetical protein Neut_0446 [Nitrosomonas eutropha C91] gi|114307480|gb|ABI58723.1| protein of unknown function DUF224, cysteine-rich region domain protein [Nitrosomonas eutropha C91] Length = 426 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y P + + + + +++ Sbjct: 17 EANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIPLNERFVQHMD------ 70 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC T C CP + + I + M+ Sbjct: 71 RCLTCRACESVCPSNVAYGRLINNARAMI 99 >gi|302347921|ref|YP_003815559.1| Putative iron-sulfur protein [Acidilobus saccharovorans 345-15] gi|302328333|gb|ADL18528.1| Putative iron-sulfur protein [Acidilobus saccharovorans 345-15] Length = 694 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 12/101 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE------R 214 ++ C C C+ +CP++ + L P ++ R + R+ + R Sbjct: 285 WKQRLDFDACTSCMRCTNACPAFTA--GKPLSPRDVIVTMRDAM--REGLWDQQAWGSGR 340 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L +P L+ C T C CP ++ I ++ ++ Sbjct: 341 LQV--NPEALWSCVTCGACVYECPVTIHHVDTIIDLRRGMV 379 >gi|259417330|ref|ZP_05741249.1| glycolate oxidase, iron-sulfur subunit [Silicibacter sp. TrichCH4B] gi|259346236|gb|EEW58050.1| glycolate oxidase, iron-sulfur subunit [Silicibacter sp. TrichCH4B] Length = 439 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ+ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTSFTDEQLQNPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYI 103 >gi|138895044|ref|YP_001125497.1| glycolate oxidase iron-sulfur subunit [Geobacillus thermodenitrificans NG80-2] gi|196248382|ref|ZP_03147083.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] gi|134266557|gb|ABO66752.1| Glycolate oxidase iron-sulfur subunit [Geobacillus thermodenitrificans NG80-2] gi|196212107|gb|EDY06865.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] Length = 452 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D +CV C C SCP+Y + P + + + + + + + LD Sbjct: 23 RFADLPDPSKWADCVHCGMCLESCPTYEQTGEEQHSPRGRVHLMKSVGEGKLDLTPDLLD 82 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ L Sbjct: 83 P------IFTCLDCRACTTACPADVDVGGLIEQVRGQL 114 >gi|320449626|ref|YP_004201722.1| glycolate oxidase, iron-sulfur subunit GlcF [Thermus scotoductus SA-01] gi|320149795|gb|ADW21173.1| glycolate oxidase, iron-sulfur, subunit GlcF [Thermus scotoductus SA-01] Length = 428 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 7/94 (7%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + CV C C +CP+Y + P + + +++ E L Sbjct: 12 KEGEVMAHAIEACVHCGFCLPTCPTYLVLQEEMDSPRGRIFLMKEVLEGNLSL-EEALPY 70 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L+ RC C +CP G+ + IA + Sbjct: 71 LD------RCLACQACVTACPSGVPYGELIATFR 98 >gi|254473590|ref|ZP_05086986.1| glycolate oxidase, iron-sulfur subunit [Pseudovibrio sp. JE062] gi|211957302|gb|EEA92506.1| glycolate oxidase, iron-sulfur subunit [Pseudovibrio sp. JE062] Length = 436 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ L +CV C C+ +CP++ D P + + +++ Sbjct: 2 QTNFTSEQLKDSATAVSEQILRKCVHCGFCTATCPTFALLGDELDSPRGRIYLIKEMLE- 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R + + + RC + ++C +CP G+N + + Sbjct: 61 -----NDRPADAKTVKHIDRCLSCLSCMTTCPSGVNYMHLVDHAR 100 >gi|254719919|ref|ZP_05181730.1| hypothetical protein Bru83_10314 [Brucella sp. 83/13] gi|265984926|ref|ZP_06097661.1| glycolate oxidase iron-sulfur subunit [Brucella sp. 83/13] gi|306838507|ref|ZP_07471345.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. NF 2653] gi|264663518|gb|EEZ33779.1| glycolate oxidase iron-sulfur subunit [Brucella sp. 83/13] gi|306406374|gb|EFM62615.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. NF 2653] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|306845499|ref|ZP_07478069.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. BO1] gi|306274110|gb|EFM55935.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. BO1] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|84684312|ref|ZP_01012214.1| glycolate oxidase, iron-sulfur subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668065|gb|EAQ14533.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium HTCC2654] Length = 428 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L CV C C+ +CP+Y D P + + +++S + + +++ Sbjct: 16 ARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLESGRPADEKTVKHID- 74 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC + + C +CP G++ + + + Sbjct: 75 -----RCLSCLACMTTCPSGVHYMHLVDHARAHIEK 105 >gi|257059818|ref|YP_003137706.1| hypothetical protein Cyan8802_1980 [Cyanothece sp. PCC 8802] gi|256589984|gb|ACV00871.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cyanothece sp. PCC 8802] Length = 447 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + CV C C ++CPSY P + + Sbjct: 19 FDDKNPPPKELIDACVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMNAIEQGEAAIDE--- 75 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ + IAK + Sbjct: 76 ---TTSQHFDSCLGCLACVSTCPSGVQYDQLIAKTR 108 >gi|261409404|ref|YP_003245645.1| hypothetical protein GYMC10_5631 [Paenibacillus sp. Y412MC10] gi|261285867|gb|ACX67838.1| protein of unknown function DUF224 cysteine-rich region domain protein [Paenibacillus sp. Y412MC10] Length = 465 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C T+CP++ P + + ++D E ++ Sbjct: 18 EDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMKAVVDGLMEPDESFRSQMD---- 73 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + + I + + + K Sbjct: 74 --LCLGCRACEPACPSDVKYGQLIEQTRAAIAAEK 106 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL-------NPAKAIAKIK 251 ++S E + L D +L C C +CP + +P IA +K Sbjct: 1 MNSTHEKLAQSLKLTLDEDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMK 55 >gi|300934106|ref|ZP_07149362.1| putative Fe-S oxidoreductase [Corynebacterium resistens DSM 45100] Length = 1211 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 43/153 (28%), Gaps = 42/153 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++ P+ K + +D C C C CP+ WN+ + L P +L+ A Sbjct: 284 MENADPETDKIGAGTIDDFTWKGWMDFTSCTECGRCQEQCPA--WNTAKPLSPKLLITAL 341 Query: 201 RWLI-----------------------------DSRDEFQGER---------LDNLEDPF 222 R D + + + DP Sbjct: 342 RDNAIESAPYLKAAKAEGARGAGMFSGDTAVLDDPAMDAHADMPLLQLVASGEQGVIDPD 401 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C C + CP + I ++ + Sbjct: 402 ILWSCTNCGACVEQCPVDIEHIDHIVDMRRYQV 434 >gi|322435794|ref|YP_004218006.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidobacterium sp. MP5ACTX9] gi|321163521|gb|ADW69226.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidobacterium sp. MP5ACTX9] Length = 788 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 12/106 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR----------DE 209 ++ Y C+ C C CP+ + L P+ L R ++ + Sbjct: 280 AWPRLLDAYACIQCNRCQDVCPATAT--GKALSPSALEINKRMELNELSRNVKGFEQGEA 337 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + + C T C + CP P I I+ + Sbjct: 338 SSNPLLGLVLSAEAAWACTTCGACIEVCPVQDEPMLDIIDIRRQQV 383 >gi|317051570|ref|YP_004112686.1| hypothetical protein Selin_1395 [Desulfurispirillum indicum S5] gi|316946654|gb|ADU66130.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfurispirillum indicum S5] Length = 659 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP++ D+ L P ++ + + E L + Sbjct: 283 WKDIFDADACTQCKRCQDRCPAHVT--DKPLSPMKVVNQVGEVAFAGGEAN---LIDTVS 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + + I ++ L+ Sbjct: 338 RDALWSCTTCRACEDICPASIEHLRKILDMRRNLV 372 >gi|329923223|ref|ZP_08278709.1| cysteine-rich domain protein [Paenibacillus sp. HGF5] gi|328941549|gb|EGG37839.1| cysteine-rich domain protein [Paenibacillus sp. HGF5] Length = 465 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C T+CP++ P + + ++D E ++ Sbjct: 18 EDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMKAVVDGLMEPDESFRSQMD---- 73 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + + I + + + K Sbjct: 74 --LCLGCRACEPACPSDVKYGQLIEQTRAAIAAEK 106 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL-------NPAKAIAKIK 251 ++S E + L D +L C C +CP + +P IA +K Sbjct: 1 MNSTHEKLAQSLKLTLDEDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMK 55 >gi|251794524|ref|YP_003009255.1| hypothetical protein Pjdr2_0488 [Paenibacillus sp. JDR-2] gi|247542150|gb|ACS99168.1| protein of unknown function DUF224 cysteine-rich region domain protein [Paenibacillus sp. JDR-2] Length = 744 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + P + Q W R+ + + L+ + D L+ C T NC + CP G I Sbjct: 372 IIPTMTAQKQAWNA--REGTKPDELELIGDVMSEEELWACTTCRNCEEMCPVGNEHVDKI 429 Query: 248 AKIKMMLL 255 ++ L+ Sbjct: 430 IDMRRYLV 437 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P + K++ L ++ Sbjct: 291 LYACVECGRCTNVCPASNTGKLLSPMHLMTKLRDHLTEKG 330 >gi|256158101|ref|ZP_05456019.1| hypothetical protein BcetM4_04600 [Brucella ceti M490/95/1] gi|256252944|ref|ZP_05458480.1| hypothetical protein BcetB_01257 [Brucella ceti B1/94] gi|261220035|ref|ZP_05934316.1| glycolate oxidase iron-sulfur subunit [Brucella ceti B1/94] gi|265996618|ref|ZP_06109175.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M490/95/1] gi|260918619|gb|EEX85272.1| glycolate oxidase iron-sulfur subunit [Brucella ceti B1/94] gi|262550915|gb|EEZ07076.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M490/95/1] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|254712039|ref|ZP_05173850.1| hypothetical protein BcetM6_01327 [Brucella ceti M644/93/1] gi|254715108|ref|ZP_05176919.1| hypothetical protein BcetM_01332 [Brucella ceti M13/05/1] gi|261216816|ref|ZP_05931097.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M13/05/1] gi|261319683|ref|ZP_05958880.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M644/93/1] gi|260921905|gb|EEX88473.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M13/05/1] gi|261292373|gb|EEX95869.1| glycolate oxidase iron-sulfur subunit [Brucella ceti M644/93/1] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|254711438|ref|ZP_05173249.1| hypothetical protein BpinB_14527 [Brucella pinnipedialis B2/94] gi|256029932|ref|ZP_05443546.1| hypothetical protein BpinM2_04635 [Brucella pinnipedialis M292/94/1] gi|261319044|ref|ZP_05958241.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis B2/94] gi|265986952|ref|ZP_06099509.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis M292/94/1] gi|261298267|gb|EEY01764.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis B2/94] gi|264659149|gb|EEZ29410.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis M292/94/1] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|254488531|ref|ZP_05101736.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. GAI101] gi|214045400|gb|EEB86038.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. GAI101] Length = 463 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+S ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTTFTPEQLKSPAIQRSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + +R + + + RC + + C +CP G++ + + + R Sbjct: 57 -DMLENDRDPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARDYIEQR 106 >gi|23499944|ref|NP_699384.1| glycolate oxidase, iron-sulfur subunit [Brucella suis 1330] gi|161620262|ref|YP_001594148.1| hypothetical protein BCAN_B0182 [Brucella canis ATCC 23365] gi|163844371|ref|YP_001622026.1| hypothetical protein BSUIS_B0185 [Brucella suis ATCC 23445] gi|225628648|ref|ZP_03786682.1| glycolate oxidase, iron-sulfur subunit [Brucella ceti str. Cudo] gi|254702600|ref|ZP_05164428.1| hypothetical protein Bsuib36_01352 [Brucella suis bv. 3 str. 686] gi|254706269|ref|ZP_05168097.1| hypothetical protein BpinM_04550 [Brucella pinnipedialis M163/99/10] gi|256014968|ref|YP_003104977.1| glycolate oxidase, iron-sulfur subunit [Brucella microti CCM 4915] gi|260166965|ref|ZP_05753776.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. F5/99] gi|260568492|ref|ZP_05838961.1| glycolate oxidase [Brucella suis bv. 4 str. 40] gi|261313714|ref|ZP_05952911.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis M163/99/10] gi|261753182|ref|ZP_05996891.1| glycolate oxidase iron-sulfur subunit [Brucella suis bv. 3 str. 686] gi|261756351|ref|ZP_06000060.1| glycolate oxidase [Brucella sp. F5/99] gi|23463522|gb|AAN33389.1| glycolate oxidase, iron-sulfur subunit [Brucella suis 1330] gi|161337073|gb|ABX63377.1| protein of unknown function DUF224 cysteine-rich region domain protein [Brucella canis ATCC 23365] gi|163675094|gb|ABY39204.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225616494|gb|EEH13542.1| glycolate oxidase, iron-sulfur subunit [Brucella ceti str. Cudo] gi|255997628|gb|ACU49315.1| glycolate oxidase, iron-sulfur subunit [Brucella microti CCM 4915] gi|260155157|gb|EEW90238.1| glycolate oxidase [Brucella suis bv. 4 str. 40] gi|261302740|gb|EEY06237.1| glycolate oxidase iron-sulfur subunit [Brucella pinnipedialis M163/99/10] gi|261736335|gb|EEY24331.1| glycolate oxidase [Brucella sp. F5/99] gi|261742935|gb|EEY30861.1| glycolate oxidase iron-sulfur subunit [Brucella suis bv. 3 str. 686] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|254695315|ref|ZP_05157143.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] gi|261215685|ref|ZP_05929966.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] gi|260917292|gb|EEX84153.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 3 str. Tulya] Length = 433 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|327310226|ref|YP_004337123.1| 4Fe-4S ferredoxin [Thermoproteus uzoniensis 768-20] gi|326946705|gb|AEA11811.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoproteus uzoniensis 768-20] Length = 89 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 I + C C C CP+Y R++GP LQ R ++D + Sbjct: 1 MISEIDRCARCGFCEAVCPTYNAVRMRHMGPRGRLQMARAVLDGGVSSRYVV-------E 53 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP + AI + + L R Sbjct: 54 SLATCLRCRACELVCPASIRIVDAIVEARKRLYARA 89 >gi|221635608|ref|YP_002523484.1| iron-sulfur cluster binding protein [Thermomicrobium roseum DSM 5159] gi|221158201|gb|ACM07319.1| iron-sulfur cluster binding protein [Thermomicrobium roseum DSM 5159] Length = 753 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C CS CP Y S G L L+ + DP L C Sbjct: 317 YCIRCGACSNVCPPYQVVSGHLFGHIYTGPIGLPL-----TAIHHGLEAVADPQSL--CV 369 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C CP + + I ++ + +R Sbjct: 370 SCNACETVCPVAIPIPRLILDVRARVAER 398 >gi|306840988|ref|ZP_07473728.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. BO2] gi|306288995|gb|EFM60263.1| glycolate oxidase, iron-sulfur subunit [Brucella sp. BO2] Length = 433 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|256111914|ref|ZP_05452870.1| hypothetical protein Bmelb3E_04515 [Brucella melitensis bv. 3 str. Ether] Length = 429 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|196228979|ref|ZP_03127845.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chthoniobacter flavus Ellin428] gi|196227260|gb|EDY21764.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chthoniobacter flavus Ellin428] Length = 467 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 6/91 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C +CP+Y P + R + + + LY C Sbjct: 37 QCIHCGMCLPTCPTYDTTKLERNSPRGRIALMRNIAEGHLDVTRAF------GEELYFCL 90 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C +CP G+N A+ + + + D + Sbjct: 91 GCLACETACPAGVNYARMFEEARADIEDAGV 121 >gi|37522641|ref|NP_926018.1| glycolate oxidase iron-sulfur subunit [Gloeobacter violaceus PCC 7421] gi|35213642|dbj|BAC91013.1| glycolate oxidase iron-sulfur subunit [Gloeobacter violaceus PCC 7421] Length = 448 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 9/118 (7%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P+P + + CV C C +CPSY P + L Sbjct: 2 ENQPRPTVPRAFDADHPPDAQIIDTCVHCGFCLATCPSYRVLGKEMDSPRGRIYLMDALN 61 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK---MMLLDRKI 259 + + C + C +CP G+ + I + ++R + Sbjct: 62 EGQIPLSQT------TAGHFDSCLGCLACVSTCPSGVQYDQLITATRPQVERNVERSV 113 >gi|227820186|ref|YP_002824157.1| glycolate oxidase, subunit GlcF [Sinorhizobium fredii NGR234] gi|227339185|gb|ACP23404.1| glycolate oxidase, subunit GlcF [Sinorhizobium fredii NGR234] Length = 432 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L ++ + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFTERQLADPATQRSNEILRSCVHCGFCTATCPTYKVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + ++C +CP G++ I + + Sbjct: 62 NKVPDERTVTHID------RCLSCLSCMTTCPSGVHYMHLIDHAREYVEK 105 >gi|218246776|ref|YP_002372147.1| hypothetical protein PCC8801_1953 [Cyanothece sp. PCC 8801] gi|218167254|gb|ACK65991.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cyanothece sp. PCC 8801] Length = 447 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + CV C C ++CPSY P + + Sbjct: 19 FDDKNPPPKELIDACVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMNAIEQGEAAIDE--- 75 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ + IAK + Sbjct: 76 ---TTSQHFDSCLGCLACVSTCPSGVQYDQLIAKTR 108 >gi|265993363|ref|ZP_06105920.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis bv. 3 str. Ether] gi|262764233|gb|EEZ10265.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis bv. 3 str. Ether] Length = 434 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 27 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 80 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 81 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 110 >gi|17989406|ref|NP_542039.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Brucella melitensis bv. 1 str. 16M] gi|225686037|ref|YP_002734009.1| hypothetical protein BMEA_B0182 [Brucella melitensis ATCC 23457] gi|256043101|ref|ZP_05446045.1| hypothetical protein Bmelb1R_01387 [Brucella melitensis bv. 1 str. Rev.1] gi|260564327|ref|ZP_05834812.1| glycolate oxidase [Brucella melitensis bv. 1 str. 16M] gi|17985281|gb|AAL54303.1| (s)-2-hydroxy-acid oxidase subunit glcf [Brucella melitensis bv. 1 str. 16M] gi|225642142|gb|ACO02055.1| protein of unknown function DUF224 cysteine-rich region domain protein [Brucella melitensis ATCC 23457] gi|260151970|gb|EEW87063.1| glycolate oxidase [Brucella melitensis bv. 1 str. 16M] gi|326410362|gb|ADZ67426.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis M28] gi|326553655|gb|ADZ88294.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis M5-90] Length = 429 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|62317129|ref|YP_222982.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 1 str. 9-941] gi|83269115|ref|YP_418406.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|189022391|ref|YP_001932132.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus S19] gi|237816692|ref|ZP_04595684.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus str. 2308 A] gi|254691385|ref|ZP_05154639.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 6 str. 870] gi|254698411|ref|ZP_05160239.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254731858|ref|ZP_05190436.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|256256570|ref|ZP_05462106.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|260544366|ref|ZP_05820187.1| glycolate oxidase [Brucella abortus NCTC 8038] gi|260756998|ref|ZP_05869346.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 6 str. 870] gi|260759628|ref|ZP_05871976.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|260762871|ref|ZP_05875203.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260882809|ref|ZP_05894423.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|297249927|ref|ZP_06933628.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 5 str. B3196] gi|62197322|gb|AAX75621.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus bv. 1 str. 9-941] gi|82939389|emb|CAJ12342.1| 4Fe-4S ferredoxin, iron-sulfur binding domain:Aldehyde dehydrogenase:Protein of unknown function DUF224 [Brucella melitensis biovar Abortus 2308] gi|189020965|gb|ACD73686.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus S19] gi|237787505|gb|EEP61721.1| glycolate oxidase, iron-sulfur subunit [Brucella abortus str. 2308 A] gi|260097637|gb|EEW81511.1| glycolate oxidase [Brucella abortus NCTC 8038] gi|260669946|gb|EEX56886.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 4 str. 292] gi|260673292|gb|EEX60113.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260677106|gb|EEX63927.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 6 str. 870] gi|260872337|gb|EEX79406.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 9 str. C68] gi|297173796|gb|EFH33160.1| glycolate oxidase iron-sulfur subunit [Brucella abortus bv. 5 str. B3196] Length = 433 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|18312563|ref|NP_559230.1| iron-sulfur protein [Pyrobaculum aerophilum str. IM2] gi|18160030|gb|AAL63412.1| conserved iron-sulfur protein [Pyrobaculum aerophilum str. IM2] Length = 470 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 2/126 (1%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + IE S + + +R + CV C C +CP+Y D P Sbjct: 28 QKKAGIESPADKYSYVEKRLREEYGRNRNIKIAVDTCVHCGACIDACPTYLTTKDLRNSP 87 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R +I R + + L+ L + ++C T C CP G++ A ++ + Sbjct: 88 VGRAELLRDIIKRRKKVNDDVLELLYTYY--WQCLTCRRCGYVCPFGIDQADITRVVRGV 145 Query: 254 LLDRKI 259 L + + Sbjct: 146 LFEAGL 151 >gi|325981450|ref|YP_004293852.1| hypothetical protein NAL212_0753 [Nitrosomonas sp. AL212] gi|325530969|gb|ADZ25690.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosomonas sp. AL212] Length = 431 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +CV C C CP+Y P + ++ R + +++ Sbjct: 13 NNESNQCVSCGLCLPHCPTYRLLKSEADSPRGRINLMNGFVNERIPLNARFIQHMD---- 68 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RC T C CP + I ++ ++ Sbjct: 69 --RCLTCRACEVVCPNNVAYGNLIDSMRALIA 98 >gi|317123226|ref|YP_004097338.1| hypothetical protein Intca_0049 [Intrasporangium calvum DSM 43043] gi|315587314|gb|ADU46611.1| protein of unknown function DUF224 cysteine-rich region domain protein [Intrasporangium calvum DSM 43043] Length = 376 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP+Y D P + R L R E L++ Sbjct: 12 LAACISCGFCLPACPTYAMTQDERSSPRGRITLMRALETGRLEEDD---PTLQEQASF-- 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+ + + + Sbjct: 67 CLGCRACETVCPAGVQYGALLEQWR 91 >gi|196228918|ref|ZP_03127784.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chthoniobacter flavus Ellin428] gi|196227199|gb|EDY21703.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chthoniobacter flavus Ellin428] Length = 423 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 7/94 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C +CP+Y P + + +++ L Sbjct: 15 APMTHAVETCVHCGFCLAACPTYRELGQEMDTPRGRIVLMKEVLEGT-------LPLEAA 67 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + RC + C +CP G+ I+ + + Sbjct: 68 QPHVDRCLGCLACEPACPSGVPYRDLISPFRAQM 101 >gi|265989535|ref|ZP_06102092.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis bv. 1 str. Rev.1] gi|265999209|ref|ZP_05465372.2| glycolate oxidase [Brucella melitensis bv. 2 str. 63/9] gi|263000204|gb|EEZ12894.1| glycolate oxidase iron-sulfur subunit [Brucella melitensis bv. 1 str. Rev.1] gi|263092667|gb|EEZ16883.1| glycolate oxidase [Brucella melitensis bv. 2 str. 63/9] Length = 434 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 27 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 80 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 81 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 110 >gi|99082340|ref|YP_614494.1| protein of unknown function DUF224, cysteine-rich region [Ruegeria sp. TM1040] gi|99038620|gb|ABF65232.1| protein of unknown function DUF224 cysteine-rich region [Ruegeria sp. TM1040] Length = 439 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 LQ ++ + L CV C C+ +CP+Y D P + + Sbjct: 2 QTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ER+ + + + RC + + C +CP G++ + + + Sbjct: 57 -DMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYI 103 >gi|256059584|ref|ZP_05449782.1| hypothetical protein Bneo5_04420 [Brucella neotomae 5K33] gi|261323551|ref|ZP_05962748.1| glycolate oxidase iron-sulfur subunit [Brucella neotomae 5K33] gi|261299531|gb|EEY03028.1| glycolate oxidase iron-sulfur subunit [Brucella neotomae 5K33] Length = 433 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + + C +CP G+N + + + Sbjct: 76 CLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|88603097|ref|YP_503275.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88188559|gb|ABD41556.1| CoB--CoM heterodisulfide reductase subunit C [Methanospirillum hungatei JF-1] Length = 191 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 13/93 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ SCPS P + ++ + E L DP L+ Sbjct: 41 ANMCYQCGTCTGSCPSA---------PRSSYRIRLFMRRCVLGLENE---ALTDPD-LWL 87 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T +CT CP+ + P I ++ + R I Sbjct: 88 CTTCYSCTDRCPRDIAPTDVIMAMRNLAFKRDI 120 >gi|255527971|ref|ZP_05394811.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Clostridium carboxidivorans P7] gi|255508332|gb|EET84732.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Clostridium carboxidivorans P7] Length = 103 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCG-PMVLDGLLYIKNKIDPTLTL--RRSCREGIC 85 + ++YR+ P + + D + V + V++ L YI+ D L+ +C GIC Sbjct: 2 KVKVYRFEPTVENSEHYDYFDVPVVFKERWTVMNILDYIQEHCDSGLSYYKHSTCGHGIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 G C + ++G LAC + I + PL +IKDLV Sbjct: 62 GRCTLMVNGKPVLAC-THVVKDDKEIVLEPLKGKKLIKDLVTR 103 >gi|153872505|ref|ZP_02001379.1| glycolate oxidase, iron-sulfur subunit [Beggiatoa sp. PS] gi|152071028|gb|EDN68620.1| glycolate oxidase, iron-sulfur subunit [Beggiatoa sp. PS] Length = 401 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 8/96 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + ++ Q Sbjct: 19 NRILRSCVHCGFCNATCPTYQLLGDELDGPRGRVYLIKQALEGNPVSQK-------TQQH 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L RC T + C +CP G+ + +I ++ ++ Sbjct: 72 LDRCLTCLACESTCPSGVRY-SHLLEIGREWIEPRV 106 >gi|315649566|ref|ZP_07902651.1| hypothetical protein PVOR_30438 [Paenibacillus vortex V453] gi|315275039|gb|EFU38414.1| hypothetical protein PVOR_30438 [Paenibacillus vortex V453] Length = 467 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C T+CP++ P + + ++D E ++ Sbjct: 18 EDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMKAVVDGLMEPDESFRSQMD---- 73 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + + I + + + K Sbjct: 74 --LCLGCRACEPACPSDVKYGQLIEQTRAAIAAEK 106 Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL-------NPAKAIAKIK 251 ++S E + L D +L C C +CP + +P IA +K Sbjct: 1 MNSTHEKLAQALKLTLDEDQLTNCMRCGFCQTACPTFIETGLEAASPRGRIALMK 55 >gi|86137135|ref|ZP_01055713.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. MED193] gi|85826459|gb|EAQ46656.1| glycolate oxidase, iron-sulfur subunit [Roseobacter sp. MED193] Length = 440 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L CV C C+ +CP+Y D P + + D + R+ + + Sbjct: 19 NEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIK------DMLENNRVPDEKTVKH 72 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + RC + + C +CP G++ I + + Sbjct: 73 IDRCLSCLACMSTCPSGVHYMHLIDHARAYI 103 >gi|183980637|ref|YP_001848928.1| iron-sulphur-binding reductase [Mycobacterium marinum M] gi|183173963|gb|ACC39073.1| iron-sulphur-binding reductase [Mycobacterium marinum M] Length = 985 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 54/216 (25%), Gaps = 50/216 (23%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 + + + + ++ P K L + +P Sbjct: 211 TTALLAHIAVMLAFLIIVLHSKHLHIFLAPINVTFKRLPDGLGPLLPVEADGKPVDFENP 270 Query: 148 PKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WL 203 P A ED C C C + CP+ WN+ + L P +++ R W+ Sbjct: 271 PDDAIFGRGKIEDFTWKGMLDFATCTECGRCQSQCPA--WNTGKPLSPKLVIMDLRDHWM 328 Query: 204 I-----------DSRDEFQGERLDN---------------------------------LE 219 D + E + Sbjct: 329 AKAPYILGEKTADPLEGLDLETAAEEGHHVPESGFGRVPGDGPEQAARPLVGTAEQGGVI 388 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C + C + CP + I ++ + Sbjct: 389 DPDVLWSCVSCGACVEQCPVDIEHIDHIVDMRRYQV 424 >gi|116071620|ref|ZP_01468888.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. BL107] gi|116065243|gb|EAU71001.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. BL107] Length = 453 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 6/93 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 CV C C +C SY + P + A R + E LD Sbjct: 23 ADPCVHCGFCLPTCASYRVLASEMDSPRGRIHALRAI-----EAGELELDATVASH-FDT 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP G+ + I + L + K+ Sbjct: 77 CLGCYACVTACPSGVRYDQLIEATRPKLNNAKL 109 >gi|78183773|ref|YP_376207.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. CC9902] gi|78168067|gb|ABB25164.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. CC9902] Length = 453 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 6/93 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 CV C C +C SY + P + A R + E LD Sbjct: 23 ADPCVHCGFCLPTCASYRVLASEMDSPRGRIHALRAI-----EAGELELDATVASH-FDT 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP G+ + I + L + K+ Sbjct: 77 CLGCYACVTACPSGVRYDQLIEATRPKLNNAKL 109 >gi|126724972|ref|ZP_01740815.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium HTCC2150] gi|126706136|gb|EBA05226.1| glycolate oxidase, iron-sulfur subunit [Rhodobacterales bacterium HTCC2150] Length = 430 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+S ++ + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFTPEQLKSSAIQRSNEVLRACVHCGFCTATCPTYQVLGDELDSPRGRIYMIKDMLET 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +++ RC + + C +CP G++ + + + Sbjct: 62 GRPADEQTVKHVD------RCLSCLACMSTCPSGVHYMHLVDHAREYI 103 >gi|322420297|ref|YP_004199520.1| hypothetical protein GM18_2798 [Geobacter sp. M18] gi|320126684|gb|ADW14244.1| protein of unknown function DUF162 [Geobacter sp. M18] Length = 711 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 7/108 (6%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K +C+ C C CP + G L Sbjct: 287 MDNQRTEMAKDPKFKQALQCIRCGSCLNVCPIFRLVGGHVFGKVYTGGIGTIL-----TA 341 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L E+ L C NCTQ CP L+ + I +I+ L+ K Sbjct: 342 WFDELKKSEEIQGL--CIQCGNCTQVCPGKLDIPEMILEIRRRLVLEK 387 >gi|322418811|ref|YP_004198034.1| hypothetical protein GM18_1289 [Geobacter sp. M18] gi|320125198|gb|ADW12758.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 706 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP+Y P +Q + + + L Sbjct: 283 WKDIFDADACTGCKRCQDRCPAYGTQK-----PLSPMQVVQQIGEISCTNPQANLIETVS 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C + CP + I +++ L+ Sbjct: 338 QDAIWSCTTCRACQEICPAQVEHVNKIIEMRRNLV 372 >gi|163847371|ref|YP_001635415.1| hypothetical protein Caur_1809 [Chloroflexus aurantiacus J-10-fl] gi|222525217|ref|YP_002569688.1| hypothetical protein Chy400_1957 [Chloroflexus sp. Y-400-fl] gi|163668660|gb|ABY35026.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449096|gb|ACM53362.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus sp. Y-400-fl] Length = 719 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 18/112 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAY-----------RWLID- 205 ++ L C+ C C + CP++ S +YL + R L + Sbjct: 304 WKRRMDLDACMRCGRCQSVCPAHASGALLSPKYLITKMADLQRGDPIHFKDGTVRTLAEL 363 Query: 206 SRDEFQGERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 S + E L + + L+ C T C CP + I ++ L Sbjct: 364 SENGTTAETLPLVGTIIEAEELWACTTCNACVHECPAMIEHVDDIVDMRRYL 415 >gi|167772913|ref|ZP_02444966.1| hypothetical protein ANACOL_04301 [Anaerotruncus colihominis DSM 17241] gi|167664846|gb|EDS08976.1| hypothetical protein ANACOL_04301 [Anaerotruncus colihominis DSM 17241] Length = 101 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 6/103 (5%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCG-PMVLDGLLYIKNKIDPTLT-LRRS-CREGIC 85 ++ RW+P+ P + Y V L G V+D L YI K+D TL+ R S C +GIC Sbjct: 2 NVQVTRWDPETDSRPHLQLYQVPLPADGSHTVMDVLDYIYEKLDGTLSYYRHSVCNQGIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD 128 G C + ++G LAC + + ++ + P + +V+KDLVV Sbjct: 62 GRCAVRVNGKTRLACTC--RVWEESLELGP-KNENVVKDLVVR 101 >gi|260905160|ref|ZP_05913482.1| glycolate oxidase iron-sulfur subunit [Brevibacterium linens BL2] Length = 490 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 8/128 (6%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + + ++P + + +CV C C +CP+Y + Sbjct: 24 TPLEATMATAGQATMEMAPPTMDHSAFDVFNPPDPGLIADCVHCGFCLPACPTYQLWGNE 83 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 P + ++ E C M C +CP G+ K I Sbjct: 84 EDSPRGRIYLM-------EKGLEEGPMTASMVEHFDACLGCMACVSACPSGVQYDKLIEA 136 Query: 250 IKMMLLDR 257 + ++R Sbjct: 137 TRGQ-VER 143 >gi|296535017|ref|ZP_06897294.1| glycolate oxidase [Roseomonas cervicalis ATCC 49957] gi|296264656|gb|EFH11004.1| glycolate oxidase [Roseomonas cervicalis ATCC 49957] Length = 136 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L+ + L CV C C+ +CP++ D P + + +++S Sbjct: 2 QTHFTAAQLEDADLSASNTILRTCVHCGFCTATCPTFVLLGDELDSPRGRIYLIKEMLES 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + ++C +CP G++ + + + + Sbjct: 62 GQPATESVVKHVD------RCLSCLSCMTTCPSGVHYMHLVDHARRYIEE 105 >gi|262204164|ref|YP_003275372.1| hypothetical protein Gbro_4337 [Gordonia bronchialis DSM 43247] gi|262087511|gb|ACY23479.1| protein of unknown function DUF224 cysteine-rich region domain protein [Gordonia bronchialis DSM 43247] Length = 1215 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 17/43 (39%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E L + D L+ C T C + CP + I ++ + Sbjct: 406 EALGAVIDTETLWSCTTCGACVEQCPVDIEHVDHILDMRRYQV 448 >gi|134100796|ref|YP_001106457.1| glycolate oxidase, iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|291009032|ref|ZP_06567005.1| glycolate oxidase, iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] gi|133913419|emb|CAM03532.1| glycolate oxidase, iron-sulfur subunit [Saccharopolyspora erythraea NRRL 2338] Length = 359 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +CP+Y D P + R L R E L + Sbjct: 15 LDRCISCGFCLPACPTYALTGDEASSPRGRITLMRALETGR---LDEDDPTLAEESSF-- 69 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C +C CP G+ + + + Sbjct: 70 CLGCRSCETVCPAGVEYGALLEQWR 94 >gi|186681257|ref|YP_001864453.1| hypothetical protein Npun_F0763 [Nostoc punctiforme PCC 73102] gi|186463709|gb|ACC79510.1| protein of unknown function DUF224, cysteine-rich region domain protein [Nostoc punctiforme PCC 73102] Length = 451 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + +++ Sbjct: 26 PDPKLIDSCVHCGFCLSTCPSYRVLGKEMDSPRGRIYLMDAINEGEIALNTATVEH---- 81 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 82 --FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 114 >gi|170078192|ref|YP_001734830.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. PCC 7002] gi|169885861|gb|ACA99574.1| glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. PCC 7002] Length = 441 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + CV C C +CPSY P + + E + + Sbjct: 22 IDSCVHCGFCLDTCPSYRVLGSEMDSPRGRIYLMDAIAKGEAEINSATVQH------FDS 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CT +CP G+ + +A ++ + Sbjct: 76 CLGCLACTSACPSGVRYDELLASMRAQI 103 >gi|78190747|gb|ABB29695.1| succinate dehydrogenase iron-sulfur protein [Aphrocallistes vastus] Length = 96 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 3/96 (3%) Query: 87 SCGMNIDGTNTLACVKDMKDIKGAI-AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNIDG NTLAC+ + + +YPLPHM V+KDLV DM++FY Q++ IEP+LK Sbjct: 1 SCAMNIDGVNTLACLCRINTDSSKVSKIYPLPHMYVVKDLVPDMTNFYEQYKQIEPYLKR 60 Query: 146 VSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K+L+QS ++R K+DGLYEC++CACCSTS Sbjct: 61 KDERRIGKKQLIQSIDERAKMDGLYECILCACCSTS 96 >gi|301165614|emb|CBW25185.1| putative iron-sulphur-binding reductase [Bacteriovorax marinus SJ] Length = 671 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDN-L 218 L CV C C+ CP+ + L P ++ R + ++++ E + +N L Sbjct: 288 NRIDLLTCVECGRCTNVCPALNA--GKNLNPKTIITKARDFVFEVEAKGEKDADIWENPL 345 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C T C + CP + I + K Sbjct: 346 YASNELDACTTCGACMEECPANIEHVNIIMEAKRY 380 >gi|138894046|ref|YP_001124499.1| glycolate oxidase, iron-sulfur subunit [Geobacillus thermodenitrificans NG80-2] gi|134265559|gb|ABO65754.1| Glycolate oxidase, iron-sulfur subunit [Geobacillus thermodenitrificans NG80-2] Length = 454 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWL 203 + + ++ ++R D L C+ C C SCP+Y + P + + + Sbjct: 1 MTTKTEQAHIQKAFQERMDEDELMNCMRCGFCLPSCPTYIESGQQETQSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D E E L C C Q CP G+ + + + ++ K Sbjct: 61 VDGLIEPDEEV------ERSLSLCLGCRACEQVCPSGVRYGHLLEEARDIIAQHK 109 >gi|207110318|ref|ZP_03244480.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori HPKX_438_CA4C1] Length = 87 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query: 22 TGEKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC 80 + + R+ +++P + P Y + + + L I+ DP L+ C Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVC 60 Query: 81 REGICGSCGMNIDGTNTLACVKDMKDI 107 R GICGSC M ++G LAC Sbjct: 61 RAGICGSCAMMVNGRPRLACKTLTSSF 87 >gi|148253195|ref|YP_001237780.1| glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. BTAi1] gi|146405368|gb|ABQ33874.1| Glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. BTAi1] Length = 441 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + L CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTEFTLAQLADPDIAVADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + ++C +CP G++ + + ++ + Sbjct: 62 DQAPTADVVKHID------RCLSCLSCMTTCPSGVHYMHLVDQARVRIEK 105 >gi|17228119|ref|NP_484667.1| glycolate oxidase subunit (Fe-S) protein [Nostoc sp. PCC 7120] gi|17129969|dbj|BAB72581.1| glycolate oxidase subunit (Fe-S) protein [Nostoc sp. PCC 7120] Length = 450 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + +++ Sbjct: 26 PDPKLIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMDAINEGEIALNTATVEH---- 81 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 82 --FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 114 >gi|75910752|ref|YP_325048.1| hypothetical protein Ava_4555 [Anabaena variabilis ATCC 29413] gi|75704477|gb|ABA24153.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 450 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + +++ Sbjct: 26 PDPKLIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMDAINEGEIALNTATVEH---- 81 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 82 --FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 114 >gi|166367172|ref|YP_001659445.1| glycolate oxidase Fe-S subunit [Microcystis aeruginosa NIES-843] gi|166089545|dbj|BAG04253.1| glycolate oxidase Fe-S subunit [Microcystis aeruginosa NIES-843] Length = 451 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + CV C C ++CPSY P + + L Sbjct: 21 FDPKNPPAQELIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMNAIN-----KGEAVL 75 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C + C +CP G+ + IA ++ Sbjct: 76 DETTSQH-FDTCLGCLACVSTCPSGVQYDQLIAAVR 110 >gi|237508068|ref|ZP_04520783.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] gi|235000273|gb|EEP49697.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 7/51 (13%) Query: 207 RDEFQGERLDNL--EDPFRLYRCHTIMNCTQSCP---KG--LNPAKAIAKI 250 RDE+ +L C C +CP G LNP K I + Sbjct: 232 RDEYGVAKLAEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDL 282 >gi|167722684|ref|ZP_02405920.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei DM98] gi|217425558|ref|ZP_03457051.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] gi|254299812|ref|ZP_04967260.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 406e] gi|157809788|gb|EDO86958.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 406e] gi|217391521|gb|EEC31550.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|126456494|ref|YP_001074780.1| ptuative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106a] gi|167848710|ref|ZP_02474218.1| ptuative iron-sulfur cluster-binding protein [Burkholderia pseudomallei B7210] gi|242311282|ref|ZP_04810299.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106b] gi|126230262|gb|ABN93675.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106a] gi|242134521|gb|EES20924.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106b] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASSQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|53717122|ref|YP_105247.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 23344] gi|53721587|ref|YP_110572.1| hypothetical protein BPSS0551 [Burkholderia pseudomallei K96243] gi|67640446|ref|ZP_00439252.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|76818087|ref|YP_337262.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] gi|121597867|ref|YP_990311.1| iron-sulfur cluster binding protein [Burkholderia mallei SAVP1] gi|124382558|ref|YP_001024810.1| iron-sulfur cluster binding protein [Burkholderia mallei NCTC 10229] gi|126445395|ref|YP_001061831.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 668] gi|126447501|ref|YP_001079151.1| iron-sulfur cluster binding protein [Burkholderia mallei NCTC 10247] gi|134284170|ref|ZP_01770863.1| ptuative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 305] gi|167002651|ref|ZP_02268441.1| iron-sulfur cluster binding protein [Burkholderia mallei PRL-20] gi|167741652|ref|ZP_02414426.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 14] gi|167818844|ref|ZP_02450524.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 91] gi|167827219|ref|ZP_02458690.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 9] gi|167897304|ref|ZP_02484706.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 7894] gi|167905665|ref|ZP_02492870.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei NCTC 13177] gi|167913970|ref|ZP_02501061.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 112] gi|167921883|ref|ZP_02508974.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei BCC215] gi|226195216|ref|ZP_03790807.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pakistan 9] gi|254175842|ref|ZP_04882501.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 10399] gi|254182308|ref|ZP_04888903.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1655] gi|254187371|ref|ZP_04893884.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254198716|ref|ZP_04905136.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei S13] gi|254262863|ref|ZP_04953728.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710a] gi|254355817|ref|ZP_04972096.1| iron-sulfur cluster binding protein [Burkholderia mallei 2002721280] gi|52212001|emb|CAH38008.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|52423092|gb|AAU46662.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 23344] gi|76582560|gb|ABA52034.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] gi|121225665|gb|ABM49196.1| iron-sulfur cluster binding protein [Burkholderia mallei SAVP1] gi|126224886|gb|ABN88391.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 668] gi|126240355|gb|ABO03467.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|134244488|gb|EBA44593.1| ptuative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 305] gi|148024788|gb|EDK82971.1| iron-sulfur cluster binding protein [Burkholderia mallei 2002721280] gi|157935052|gb|EDO90722.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160696885|gb|EDP86855.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 10399] gi|169655455|gb|EDS88148.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei S13] gi|184212844|gb|EDU09887.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1655] gi|225933021|gb|EEH29017.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pakistan 9] gi|238521162|gb|EEP84616.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|243061696|gb|EES43882.1| iron-sulfur cluster binding protein [Burkholderia mallei PRL-20] gi|254213865|gb|EET03250.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710a] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|313902313|ref|ZP_07835718.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467464|gb|EFR62973.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter subterraneus DSM 13965] Length = 467 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 6/82 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C ++CP+Y + P + + ++ G + RC Sbjct: 24 CVHCGFCLSACPTYLVLGEEMDSPRGRIYLMKEALEGHLPLAGSV------SEHVDRCLG 77 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 + C +CP G+ + + + Sbjct: 78 CLACVSACPSGVQYGQLLTPFR 99 >gi|134103642|ref|YP_001109303.1| iron-sulphur-binding reductase [Saccharopolyspora erythraea NRRL 2338] gi|133916265|emb|CAM06378.1| iron-sulphur-binding reductase [Saccharopolyspora erythraea NRRL 2338] Length = 740 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 44/156 (28%), Gaps = 45/156 (28%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + P ED C C C + CP+ WN+ + L P +L+ + Sbjct: 270 FEEADPDTDVFGAGKVEDFSWKGWLDFTTCTECGRCQSQCPA--WNTAKPLSPKLLITSL 327 Query: 201 RWLID----------SRDEFQGER----------LDNLE--------------------- 219 R S+D E L ++ Sbjct: 328 RDHAYAKAPYLLAGGSKDMAGDEVGITGDGAEDKLAKIDALALAEAERPLVGGPDEMGVI 387 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 DP L+ C + C + CP + I ++ + Sbjct: 388 DPEVLWACTSCGACVEQCPVDIEHVDHIVDMRRYQV 423 >gi|326383405|ref|ZP_08205092.1| hypothetical protein SCNU_10731 [Gordonia neofelifaecis NRRL B-59395] gi|326197811|gb|EGD54998.1| hypothetical protein SCNU_10731 [Gordonia neofelifaecis NRRL B-59395] Length = 807 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 50/161 (31%) Query: 143 LKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 ++T P ED C C C + CP+ WN+ + L P +++ + Sbjct: 266 METADPDVDAFGAGKIEDFSWKGWLDFTTCTECGRCQSQCPA--WNTGKPLSPKLMIMSL 323 Query: 201 R-----------------------WLIDSRDEFQGERLD--------------------- 216 R ++D+ RL+ Sbjct: 324 RDHGQAKAPYLFAGGRKDMGGDEVGIVDAEGNVDEARLNKVPEAARAEAERKLVGESEGT 383 Query: 217 --NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D L+ C T C + CP + ++ + Sbjct: 384 TGAVIDAEALWSCTTCGACVEQCPVDIEHVDHFIDMRRYQV 424 >gi|297565856|ref|YP_003684828.1| hypothetical protein Mesil_1427 [Meiothermus silvanus DSM 9946] gi|296850305|gb|ADH63320.1| protein of unknown function DUF224 cysteine-rich region domain protein [Meiothermus silvanus DSM 9946] Length = 420 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y + P + + +++ E L L+ Sbjct: 17 MAHAIEACVHCGFCLPACPTYAVLGEEMDSPRGRIFLMKEVLEG-SLPLEETLPYLD--- 72 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RC + C +CP G+ + I + Sbjct: 73 ---RCLGCLGCVTACPSGVPYGELITTFR 98 >gi|159028575|emb|CAO90577.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 451 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + CV C C ++CPSY P + + L Sbjct: 21 FDPKNPPAQELIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMNAIN-----KGEAVL 75 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C + C +CP G+ + IA ++ Sbjct: 76 DETTSQH-FDTCLGCLACVSTCPSGVQYDQLIAAVR 110 >gi|158421704|ref|YP_001522996.1| glycolate oxidase [Azorhizobium caulinodans ORS 571] gi|158328593|dbj|BAF86078.1| glycolate oxidase [Azorhizobium caulinodans ORS 571] Length = 441 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 6/88 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y D P + + ++++ E + +++ R Sbjct: 22 LRTCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKDMLENGRPATEEEVKHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + ++C +CP G++ + + + Sbjct: 76 CLSCLSCMTTCPSGVHYMHLVDHARAHI 103 >gi|328951059|ref|YP_004368394.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451383|gb|AEB12284.1| protein of unknown function DUF224 cysteine-rich region domain protein [Marinithermus hydrothermalis DSM 14884] Length = 425 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 6/82 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV C C + CP+Y P + Y + + L+ Sbjct: 11 RDAEACVRCGLCLSVCPTYRETGLEIQSPRGRVMLYAAYAQGQVNDRAAVLEAA------ 64 Query: 225 YRCHTIMNCTQSCPKGLNPAKA 246 Y C C CP G+ P +A Sbjct: 65 YDCLDCRACQSVCPMGVRPGEA 86 >gi|238024032|ref|YP_002908264.1| Fe-S oxidoreductase [Burkholderia glumae BGR1] gi|237878697|gb|ACR31029.1| Fe-S oxidoreductase [Burkholderia glumae BGR1] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVTGMAGGTDAGYAGSPTPGIAV 304 Query: 206 SRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + + + L + L+ C T C + CP + AI ++ Sbjct: 305 GRHGGRPDGPIVSGLIEADTLWSCTTCRACVEECPMLIEHVDAIVDMRR 353 >gi|86604862|ref|YP_473625.1| glycolate oxidase, iron-sulfur subunit [Synechococcus sp. JA-3-3Ab] gi|86553404|gb|ABC98362.1| putative glycolate oxidase, iron-sulfur subunit [Synechococcus sp. JA-3-3Ab] Length = 441 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 6/92 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + CV C C T+CPSY P + L + + + Sbjct: 13 DPPDPKLIDACVHCGFCLTTCPSYRVLGKETDSPRGRIYQMDALNQGQISLSAAVVSH-- 70 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ + IA + Sbjct: 71 ----FDTCLGCLACVTACPSGVRYDRLIAATR 98 >gi|256391679|ref|YP_003113243.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357905|gb|ACU71402.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Catenulispora acidiphila DSM 44928] Length = 384 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 5/107 (4%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + D L C+ C C +CP+Y P + R L+ Sbjct: 2 SEDTSRREMPESEPAGIFSKDLLDACISCGFCLPACPTYALTGQEQSSPRGRITLMR-LL 60 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ D + L + L C C CP G+ + + + Sbjct: 61 ETGDLAADD--PTLAEEASL--CLGCRACETVCPAGVQYGHLLEEWR 103 >gi|126433041|ref|YP_001068732.1| hypothetical protein Mjls_0429 [Mycobacterium sp. JLS] gi|126232841|gb|ABN96241.1| protein of unknown function DUF224, cysteine-rich region domain protein [Mycobacterium sp. JLS] Length = 1042 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 50/207 (24%), Gaps = 60/207 (28%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P K L + + EP + A ED Sbjct: 233 HSKHLHIGLAPINVTFKRLPNGLGPLLPMEYNGEPIDFEDPAEDAVLGRGKIEDFTWKGY 292 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-------------------- 204 C C C + CP+ WN+ + L P +++ R + Sbjct: 293 LDFTTCTECGRCQSQCPA--WNTGKPLSPKLVIMNLRDHMFAKAPYILGDKESPLENTPE 350 Query: 205 ---------------DSRDEFQGERLDNLE---------------------DPFRLYRCH 228 S D + + DP L+ C Sbjct: 351 GGLGEELRGEKESEKHSHDHVPESGFERIMGSGPEQATRPLVGTLEQGGVIDPDVLWSCT 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C + CP + I ++ + Sbjct: 411 TCGACVEQCPVDIEHIDHIVDMRRYQV 437 >gi|108797422|ref|YP_637619.1| protein of unknown function DUF224, cysteine-rich region [Mycobacterium sp. MCS] gi|119866506|ref|YP_936458.1| hypothetical protein Mkms_0452 [Mycobacterium sp. KMS] gi|108767841|gb|ABG06563.1| protein of unknown function DUF224, cysteine-rich region [Mycobacterium sp. MCS] gi|119692595|gb|ABL89668.1| protein of unknown function DUF224, cysteine-rich region domain protein [Mycobacterium sp. KMS] Length = 1046 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 50/207 (24%), Gaps = 60/207 (28%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P K L + + EP + A ED Sbjct: 233 HSKHLHIGLAPINVTFKRLPNGLGPLLPMEYNGEPIDFEDPAEDAVLGRGKIEDFTWKGY 292 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-------------------- 204 C C C + CP+ WN+ + L P +++ R + Sbjct: 293 LDFTTCTECGRCQSQCPA--WNTGKPLSPKLVIMNLRDHMFAKAPYILGDKESPLENTPE 350 Query: 205 ---------------DSRDEFQGERLDNLE---------------------DPFRLYRCH 228 S D + + DP L+ C Sbjct: 351 GGLGEELRGEKESEKHSHDHVPESGFERIMGSGPEQATRPLVGTLEQGGVIDPDVLWSCT 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C + CP + I ++ + Sbjct: 411 TCGACVEQCPVDIEHIDHIVDMRRYQV 437 >gi|167578618|ref|ZP_02371492.1| iron-sulfur cluster binding protein [Burkholderia thailandensis TXDOH] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIDV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GKHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|83717662|ref|YP_440058.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] gi|167616759|ref|ZP_02385390.1| iron-sulfur cluster binding protein [Burkholderia thailandensis Bt4] gi|257143246|ref|ZP_05591508.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] gi|83651487|gb|ABC35551.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] Length = 641 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D +G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIDV 304 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +R + +L + L+ C T C Q CP + AI ++ Sbjct: 305 GKHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|292490970|ref|YP_003526409.1| hypothetical protein Nhal_0846 [Nitrosococcus halophilus Nc4] gi|291579565|gb|ADE14022.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitrosococcus halophilus Nc4] Length = 432 Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 6/107 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + ++ + G CVMC C CP+Y D P + L + Sbjct: 5 KQDSCSPHKAQKMAFLEQGSDRCVMCGLCLPHCPTYRLTGDESESPRGRIALMGALAKDQ 64 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +L+ RC T C CP + + I + + Sbjct: 65 LIPTPRLLGHLD------RCLTCRACEAVCPSLVPYGRLIDTARAQV 105 >gi|239827292|ref|YP_002949916.1| hypothetical protein GWCH70_1915 [Geobacillus sp. WCH70] gi|239807585|gb|ACS24650.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. WCH70] Length = 452 Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +CV C C SCP+Y P + + + + + E + +D Sbjct: 26 DPPDPSKWADCVHCGMCLESCPTYEQTGQEQHSPRGRVHLIKSVAEGKLEITEDLIDP-- 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ + Sbjct: 84 ----IFMCLDCRACTTACPADVDVGGLIEEVRGQI 114 >gi|239833525|ref|ZP_04681853.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239821588|gb|EEQ93157.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 435 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + ++C +CP G+N + + + Sbjct: 76 CLSCLSCMTTCPSGVNYMHLVDHARAHIEK 105 >gi|282901684|ref|ZP_06309600.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] gi|281193447|gb|EFA68428.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] Length = 452 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + + + Sbjct: 23 PDPKLIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMDAINEGEIALNTATVQH---- 78 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 79 --FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 111 >gi|144901338|emb|CAM78202.1| Oxidoreductase/iron-sulfur cluster-binding protein [Magnetospirillum gryphiswaldense MSR-1] Length = 951 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 7/90 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFR 223 + C+ C C CPS+ L P + +R + ++ D + + + L D Sbjct: 574 IDTCIECGFCERMCPSHGLT----LSPRQRIVGWREMARAQAAGDVVRKDEIGTLYDYHG 629 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C C +CP G+ I ++ Sbjct: 630 LDTCAACGLCATACPVGIETGTLIKALRGR 659 >gi|119511524|ref|ZP_01630633.1| glycolate oxidase subunit (Fe-S) protein [Nodularia spumigena CCY9414] gi|119463835|gb|EAW44763.1| glycolate oxidase subunit (Fe-S) protein [Nodularia spumigena CCY9414] Length = 451 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 7/120 (5%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + + K + CV C C +CPSY P + Sbjct: 2 QVSDSSVNDTAKIKNLKGFDVSQPPDPKLIDSCVHCGFCLATCPSYRVIGKEMDSPRGRI 61 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + + + C + C +CP G+ K I+ + ++R Sbjct: 62 YLMDAINNGEIALNTATVQH------FDSCLGCLACVSTCPSGVQYDKLISATRHQ-VER 114 >gi|78044095|ref|YP_359297.1| iron-sulfur cluster binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996210|gb|ABB15109.1| iron-sulfur cluster binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 706 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 17/111 (15%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLID 205 +D L++C+ CA C CP Y Y GP L + Sbjct: 279 MDNGRIELKDDPVFAELFQCIRCAGCLNVCPVYQQVGGHVFGHVYTGPIGTLLTAFF--H 336 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D + DP L C + + C CP G+N + + K++ +++ Sbjct: 337 GLDAAK--------DPQAL--CGSCLRCATVCPAGINLPELLLKLRQRVVE 377 >gi|310825492|ref|YP_003957850.1| iron-sulfur cluster binding protein [Stigmatella aurantiaca DW4/3-1] gi|309398564|gb|ADO76023.1| iron-sulfur cluster binding protein [Stigmatella aurantiaca DW4/3-1] Length = 719 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 29/203 (14%) Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV-------YPL-PHMSVIKDLVVDM 129 + G + T+A V + + + PL H +I L Sbjct: 188 WEPATSVVGMAMKGLP--PTVAHVLGVAGYWTHVTIILVFLNFLPLGKHFHIITGLPNVF 245 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F + + + + ++ LY C C C T CP+Y + Sbjct: 246 --FQRTTPNGKLGTPNLEKEEFGTATVKDMTWKQGLDLYSCTECGRCQTHCPTYIT--GK 301 Query: 190 YLGPAILLQAY--------RWLIDSRD-----EFQGERLDNLEDPFRLYRCHTIMNCTQS 236 L + Q RW+ + E E + + ++ C + C + Sbjct: 302 PLTHKAVNQDLKHWLWENERWIEEGYGPTGVKEPLPEIIGSALKAETVWACTSCGWCETA 361 Query: 237 CPKGL-NPAKAIAKIKMMLLDRK 258 CP + N + I ++ + K Sbjct: 362 CPVFIENIPRLI-DMRRYQVQVK 383 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 5/129 (3%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 C + I PL H +V +DL + P P Sbjct: 284 CTECGRCQTHCPTYITGKPLTHKAVNQDLKHWLWENERWIEEGYGPTGVKEPLPEIIGSA 343 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C C C T+CP + N R + + + E ++ Sbjct: 344 LKAETVWA-----CTSCGWCETACPVFIENIPRLIDMRRYQVQVKAEFPPEIQRVFEGIE 398 Query: 217 NLEDPFRLY 225 +P+ L Sbjct: 399 RQGNPWGLG 407 >gi|260575975|ref|ZP_05843970.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodobacter sp. SW2] gi|259021901|gb|EEW25202.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodobacter sp. SW2] Length = 433 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L CV C C+ +CP+Y D P + + ++++ + +++ Sbjct: 16 ARANQILRACVHCGFCTATCPTYQLLGDEADSPRGRIYLIKDMLETGRPADARTVKHID- 74 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RC + + C +CP G++ + + Sbjct: 75 -----RCLSCLACMTTCPSGVHYMHLVDHAR 100 >gi|319949487|ref|ZP_08023543.1| iron-sulfur binding oxidoreductase [Dietzia cinnamea P4] gi|319436858|gb|EFV91922.1| iron-sulfur binding oxidoreductase [Dietzia cinnamea P4] Length = 808 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 45/173 (26%), Gaps = 55/173 (31%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGP 193 IE + K + ED C C C CP+ WN+ + L P Sbjct: 268 MEKIEELTEEDEDFEPKLGAGAIEDFSWKGWLDFSTCTECGRCQEQCPA--WNTGKPLSP 325 Query: 194 AILLQAYR---------WLIDSRDEFQGE----------------------RLDN----- 217 +++ + R L + E RL+ Sbjct: 326 KLMIMSLRDHGAAKAPYLLAGGQTTMGEETGLVDAEGNPDEAKLAKIPEAARLEAQRPLV 385 Query: 218 ---------------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C T C + CP + ++ + Sbjct: 386 GHTTADLSDDPMAAGIIDPEALWSCTTCGACVEQCPVDIEHVDHFIDMRRYQV 438 >gi|300864920|ref|ZP_07109764.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337091|emb|CBN54914.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 474 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + CV C C ++CPSY P + + + D E Sbjct: 47 IDTCVHCGFCLSTCPSYRVLGKEMDSPRGRIYLMDAINEG-DAPLNE-----ATAQHFDT 100 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 101 CLGCLACVTTCPSGVKYDKLISATRHQ-VER 130 >gi|240140567|ref|YP_002965047.1| Iron-sulfur cluster-binding protein [Methylobacterium extorquens AM1] gi|240010544|gb|ACS41770.1| Iron-sulfur cluster-binding protein [Methylobacterium extorquens AM1] Length = 632 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C T+CP++ D G + AY Sbjct: 235 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAA 294 Query: 212 G------ERL---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 RL D P L+ C T C + CP + A+ ++ L+R Sbjct: 295 EGARGALARLIGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERG 351 >gi|218531952|ref|YP_002422768.1| hypothetical protein Mchl_4040 [Methylobacterium chloromethanicum CM4] gi|218524255|gb|ACK84840.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium chloromethanicum CM4] Length = 633 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C T+CP++ D G + AY Sbjct: 236 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAA 295 Query: 212 G------ERL---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 RL D P L+ C T C + CP + A+ ++ L+R Sbjct: 296 EGARGALARLVGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERG 352 >gi|163853147|ref|YP_001641190.1| hypothetical protein Mext_3745 [Methylobacterium extorquens PA1] gi|163664752|gb|ABY32119.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium extorquens PA1] Length = 633 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C T+CP++ D G + AY Sbjct: 236 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAA 295 Query: 212 G------ERL---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 RL D P L+ C T C + CP + A+ ++ L+R Sbjct: 296 EGARGALARLVGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERG 352 >gi|254476969|ref|ZP_05090355.1| glycolate oxidase, iron-sulfur subunit [Ruegeria sp. R11] gi|214031212|gb|EEB72047.1| glycolate oxidase, iron-sulfur subunit [Ruegeria sp. R11] Length = 442 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +E LQ ++ + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTEEQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + +++ RC + + C +CP G++ + + + Sbjct: 62 QRTPDAKTVKHID------RCLSCLACMTTCPSGVHYMHLVDHARAYIEK 105 >gi|153010335|ref|YP_001371549.1| hypothetical protein Oant_3012 [Ochrobactrum anthropi ATCC 49188] gi|151562223|gb|ABS15720.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ochrobactrum anthropi ATCC 49188] Length = 435 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C+ +CP+Y + P + + ++++ E + +++ R Sbjct: 22 LRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVD------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + ++C +CP G+N + + + Sbjct: 76 CLSCLSCMTTCPSGVNYMHLVDHARAHIEK 105 >gi|110632722|ref|YP_672930.1| protein of unknown function DUF224, cysteine-rich region [Mesorhizobium sp. BNC1] gi|110283706|gb|ABG61765.1| protein of unknown function DUF224, cysteine-rich region [Chelativorans sp. BNC1] Length = 443 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPEQLADPHTAESETILRKCVHCGFCTATCPTYVELGNELDSPRGRIYLIKEMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +++ RC + ++C +CP G+N + + + Sbjct: 62 GRPADRETVTHID------RCLSCLSCMTTCPSGVNYMHLVDHARTYIEK 105 >gi|295400052|ref|ZP_06810032.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977831|gb|EFG53429.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 452 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +CV C C SCP+Y P + + + + + E + +D Sbjct: 26 DPPDPSKWADCVHCGMCLESCPTYEQTGQEQHSPRGRVHLMKSVGEGKLEITEDLIDP-- 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ + Sbjct: 84 ----IFMCLDCRACTTACPADVDVGGLIEEVRGQI 114 >gi|146342941|ref|YP_001207989.1| glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. ORS278] gi|146195747|emb|CAL79774.1| Glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. ORS278] Length = 439 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + L CV C C+ +CP+Y D P + + +++ Sbjct: 2 KTEFTLAQLADPDIAVADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLEK 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + +++ RC + ++C +CP G++ + + ++ + + Sbjct: 62 DQAPTSDVVKHID------RCLSCLSCMTTCPSGVHYMHLVDQARVRIEE 105 >gi|16329737|ref|NP_440465.1| glycolate oxidase subunit (Fe-S) protein [Synechocystis sp. PCC 6803] gi|1652221|dbj|BAA17145.1| glycolate oxidase subunit (Fe-S) protein [Synechocystis sp. PCC 6803] Length = 460 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ L CV C C +CPSY P + + + + Sbjct: 28 FDSQNPPPQAVLDSCVHCGFCLNTCPSYRVIGKETDSPRGRIYLMNGINQGQASLDATTI 87 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C + C +CP G+ + I+ + Sbjct: 88 QH------FDSCLGCLACVSACPSGVQYDQLISATR 117 >gi|271963787|ref|YP_003337983.1| hypothetical protein Sros_2258 [Streptosporangium roseum DSM 43021] gi|270506962|gb|ACZ85240.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 412 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 8/96 (8%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + +CV C C +CP+Y + P + + ++ Sbjct: 1 MDPELINDCVHCGFCLPTCPTYVLWGEEMDSPRGRIHLMKQHVEGTPLTPEM-------A 53 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C M C +CP G+ + I + + ++R Sbjct: 54 GHFDACLGCMACVTACPSGVRYDRLIEQTRAE-VER 88 >gi|11498117|ref|NP_069342.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] gi|2650120|gb|AAB90732.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] Length = 366 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C C C T+CP+Y + P +Q +D + + + + Sbjct: 1 MNIREIAAKCSKCGYC-TTCPTYRIEGWETVSPRGKIQLALKYVDGEIDVDQKIVKD--- 56 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +++C C + CP L +++ L+ + + Sbjct: 57 ---IFKCSVCGLCQEVCPVELPLIDFWEELRRTLVQKGL 92 >gi|94984981|ref|YP_604345.1| protein of unknown function DUF224, cysteine-rich region [Deinococcus geothermalis DSM 11300] gi|94555262|gb|ABF45176.1| Fe-S oxidoreductase subunit (Cysteine-rich domain enzyme) [Deinococcus geothermalis DSM 11300] Length = 989 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 20/137 (14%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + +E ++ PK E L+ E ++ Y C+ C C CP+ + L PA Sbjct: 265 MKGLEEAMEAEEPKLGVERLEDLE-WPRLLDAYACIQCNRCQDVCPANAT--GKALSPAA 321 Query: 196 LLQAYRWLID-----------------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L R ++ + L+ + ++ C T C CP Sbjct: 322 LEINKRMELNVIGAHPSPFTLRPAPFETGASTAQPLLEYAINEESVWACTTCGACMHVCP 381 Query: 239 KGLNPAKAIAKIKMMLL 255 I I+ + Sbjct: 382 VQDEQMLDIIDIRRHQV 398 >gi|312110698|ref|YP_003989014.1| hypothetical protein GY4MC1_1626 [Geobacillus sp. Y4.1MC1] gi|311215799|gb|ADP74403.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y4.1MC1] Length = 452 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +CV C C SCP+Y P + + + + + E + +D Sbjct: 26 DPPDPSKWADCVHCGMCLESCPTYEQTGQEQHSPRGRVHLMKSVGEGKLEITEDLIDP-- 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ + Sbjct: 84 ----IFMCLDCRACTTACPADVDVGGLIEEVRGQI 114 >gi|254416675|ref|ZP_05030426.1| Cysteine-rich domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176641|gb|EDX71654.1| Cysteine-rich domain protein [Microcoleus chthonoplastes PCC 7420] Length = 467 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 7/121 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 S P+ ++ ++ K D + CV C C +CPSY P Sbjct: 15 ESAATAPLETEPEESQVPGFDPKNPPKQDLIDTCVHCGFCLATCPSYRVIGKEMDSPRGR 74 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + C + C +CP G+ K I+ + ++ Sbjct: 75 IYLMDAINKGEAPLAE------GTTQHFDSCLGCLACVTTCPSGVQYDKLISATRHQ-VE 127 Query: 257 R 257 R Sbjct: 128 R 128 >gi|330819877|ref|YP_004348739.1| Fe-S oxidoreductase [Burkholderia gladioli BSR3] gi|327371872|gb|AEA63227.1| Fe-S oxidoreductase [Burkholderia gladioli BSR3] Length = 641 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRW------LID 205 ++ CV C C +CP++ D G A A + Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVTGMAGGTDAAYAGSPTPGIAV 304 Query: 206 SR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R E G + L + L+ C T C Q CP + AI ++ Sbjct: 305 GRHGGEPNGPIVSGLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|289644151|ref|ZP_06476244.1| CoB--CoM heterodisulfide reductase [Frankia symbiont of Datisca glomerata] gi|289506042|gb|EFD27048.1| CoB--CoM heterodisulfide reductase [Frankia symbiont of Datisca glomerata] Length = 731 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 33/147 (22%), Gaps = 52/147 (35%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS------------DRYLGPAILLQAYRWLIDSRD 208 + + C C C + CP++ D A L A D D Sbjct: 278 WKAMLDFSTCTECGRCQSQCPAWNTGKPLSPKLLIMDLRDHLFAKAPYLLAANGAADGED 337 Query: 209 EFQG----------------------------------------ERLDNLEDPFRLYRCH 228 + E + DP L+ C Sbjct: 338 ASKAVTGVSEDASGGHAVHHVPESGFGRVPEPGQAQVDRPLVGTEDEGGVIDPDVLWSCT 397 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 398 NCGACVEQCPVDIEHVDHIVDMRRYQV 424 >gi|253699665|ref|YP_003020854.1| hypothetical protein GM21_1035 [Geobacter sp. M21] gi|251774515|gb|ACT17096.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 661 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C +C C CP+ WN+++ L P ++ + + + R Sbjct: 284 WKDLYDPDACTVCKRCQDRCPA--WNTEKPLSPMHVVLQIGEVAAATPQADLCR---TVT 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + I +++ L Sbjct: 339 EEVLWDCTTCRACQEICPAEIEHVNKILEMRRNLA 373 >gi|218295217|ref|ZP_03496053.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermus aquaticus Y51MC23] gi|218244420|gb|EED10945.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermus aquaticus Y51MC23] Length = 418 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y + P + + +++ E L L+ Sbjct: 17 MAHAVEACVHCGFCLPTCPTYVVLQEEMDSPRGRIFLMKEVLEG-SLPLEEALPFLD--- 72 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RC C +CP G+ + IA + Sbjct: 73 ---RCLACQACVTACPSGVPYGELIATFR 98 >gi|115379687|ref|ZP_01466766.1| iron-sulphur-binding reductase [Stigmatella aurantiaca DW4/3-1] gi|115363301|gb|EAU62457.1| iron-sulphur-binding reductase [Stigmatella aurantiaca DW4/3-1] Length = 643 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 29/203 (14%) Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV-------YPL-PHMSVIKDLVVDM 129 + G + T+A V + + + PL H +I L Sbjct: 112 WEPATSVVGMAMKGLP--PTVAHVLGVAGYWTHVTIILVFLNFLPLGKHFHIITGLPNVF 169 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F + + + + ++ LY C C C T CP+Y + Sbjct: 170 --FQRTTPNGKLGTPNLEKEEFGTATVKDMTWKQGLDLYSCTECGRCQTHCPTYIT--GK 225 Query: 190 YLGPAILLQAY--------RWLIDSRD-----EFQGERLDNLEDPFRLYRCHTIMNCTQS 236 L + Q RW+ + E E + + ++ C + C + Sbjct: 226 PLTHKAVNQDLKHWLWENERWIEEGYGPTGVKEPLPEIIGSALKAETVWACTSCGWCETA 285 Query: 237 CPKGL-NPAKAIAKIKMMLLDRK 258 CP + N + I ++ + K Sbjct: 286 CPVFIENIPRLI-DMRRYQVQVK 307 Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 5/129 (3%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 C + I PL H +V +DL + P P Sbjct: 208 CTECGRCQTHCPTYITGKPLTHKAVNQDLKHWLWENERWIEEGYGPTGVKEPLPEIIGSA 267 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C C C T+CP + N R + + + E ++ Sbjct: 268 LKAETVWA-----CTSCGWCETACPVFIENIPRLIDMRRYQVQVKAEFPPEIQRVFEGIE 322 Query: 217 NLEDPFRLY 225 +P+ L Sbjct: 323 RQGNPWGLG 331 >gi|284050108|ref|ZP_06380318.1| hypothetical protein AplaP_01405 [Arthrospira platensis str. Paraca] gi|291571944|dbj|BAI94216.1| glycolate oxidase Fe-S subunit [Arthrospira platensis NIES-39] Length = 468 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 7/98 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 D + CV C C +CPSY P + +L+D+ ++ + Sbjct: 44 PPPDLINTCVHCGFCLATCPSYRVIGKEMDSPRGRI----YLMDAINKGEAPLAKA--TS 97 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C +CP G+ + IA + ++R + Sbjct: 98 EHFDSCLGCLACVTTCPSGVQYDRLIAATRPQ-VERNV 134 >gi|260578557|ref|ZP_05846468.1| ferredoxin, 4Fe-4S [Corynebacterium jeikeium ATCC 43734] gi|258603341|gb|EEW16607.1| ferredoxin, 4Fe-4S [Corynebacterium jeikeium ATCC 43734] Length = 1064 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 41/155 (26%), Gaps = 42/155 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNS------------D 188 ++ P+ + +D C C C CP++ D Sbjct: 284 MENADPEEDAIGVGKIDDFTWKGWMDFTSCTECGRCQEQCPAWNTAKPLSPKLLITNLRD 343 Query: 189 RYLGPAILLQAYR-------------------WLIDSRDEFQGER--LDNL-------ED 220 + A L+A R L D + + L + D Sbjct: 344 HAIESAPYLKAARKDAAHAGGMFSGEGATDTAVLDDPSVDAHADMPLLQLVAAGEMGVID 403 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 P L+ C C + CP + I ++ + Sbjct: 404 PDVLWSCTNCGACVEQCPVDIEHIDHIVDMRRYQV 438 >gi|68535242|ref|YP_249947.1| putative Fe-S oxidoreductase [Corynebacterium jeikeium K411] gi|68262841|emb|CAI36329.1| putative Fe-S oxidoreductase [Corynebacterium jeikeium K411] Length = 1181 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 41/155 (26%), Gaps = 42/155 (27%) Query: 143 LKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNS------------D 188 ++ P+ + +D C C C CP++ D Sbjct: 284 MENADPEEDAIGVGKIDDFTWKGWMDFTSCTECGRCQEQCPAWNTAKPLSPKLLITNLRD 343 Query: 189 RYLGPAILLQAYR-------------------WLIDSRDEFQGER--LDNL-------ED 220 + A L+A R L D + + L + D Sbjct: 344 HAIESAPYLKAARKDAAHAGGMFSGEGATDTAVLDDPSVDAHADMPLLQLVAAGEMGVID 403 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 P L+ C C + CP + I ++ + Sbjct: 404 PDVLWSCTNCGACVEQCPVDIEHIDHIVDMRRYQV 438 >gi|260892462|ref|YP_003238559.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] gi|260864603|gb|ACX51709.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] Length = 423 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 6/90 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C + CP Y ++ L+ + E R C Sbjct: 16 RCMKCGNCQSVCPIYKELRLESSVARGKIRLAEALL------KEEVAATSALKERFDLCL 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T + C CP G+ + I + L +K Sbjct: 70 TCLACESVCPSGVKVSSIILAARKELARKK 99 Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Query: 221 PFRLYRCHTIMNCTQSCP--KGLNPAKAIAKIKMMLLDR 257 + RC NC CP K L ++A+ K+ L + Sbjct: 11 EEEIIRCMKCGNCQSVCPIYKELRLESSVARGKIRLAEA 49 >gi|78190639|gb|ABB29641.1| succinate dehydrogenase iron-sulfur protein [Suberites fuscus] Length = 96 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 3/96 (3%) Query: 87 SCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 SC MNI G NTLAC + ++ + +YPLPH+ V+KDLV D+S+ Y Q+++IEPWL+ Sbjct: 1 SCSMNIGGENTLACICRIDTNLSKPVKIYPLPHLYVVKDLVPDLSNIYDQYQTIEPWLQR 60 Query: 146 VSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 KE QS EDR+K+DGLYEC++C CCSTS Sbjct: 61 KEEKDPATKEYYQSVEDRKKLDGLYECILCFCCSTS 96 >gi|189218909|ref|YP_001939550.1| glycolate dehydrogenase, iron-sulfur subunit GlcF [Methylacidiphilum infernorum V4] gi|189185767|gb|ACD82952.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Methylacidiphilum infernorum V4] Length = 416 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 15/96 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C+ SCP+Y D GP + + ++ RL + L RC Sbjct: 25 CVHCGYCNASCPTYQLLGDELDGPRGRIYLMKSFLEG-------RLSAEKVKMHLDRCLL 77 Query: 230 IMNCTQSCPKGLNPAKA------IAK--IKMMLLDR 257 C +CP + K I + +K L+R Sbjct: 78 CQGCETACPSSVEYGKLAILGKEIIEQSLKRSFLER 113 >gi|282895974|ref|ZP_06304005.1| conserved hypothetical protein [Raphidiopsis brookii D9] gi|281199084|gb|EFA73954.1| conserved hypothetical protein [Raphidiopsis brookii D9] Length = 446 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + + + +++ Sbjct: 23 PDPKLIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMDAINEGEIALNTATVEH---- 78 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ K I+ + ++R Sbjct: 79 --FDSCLGCLACVSTCPSGVQYDKLISVTRHQ-VER 111 >gi|159040856|ref|YP_001540108.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157919691|gb|ABW01118.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldivirga maquilingensis IC-167] Length = 102 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 7/97 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C C C + CP+Y R GP + +L E Sbjct: 12 NEYALTRCARCNFCESVCPTYIAFRRRVYGPRGRIWIIMFLSQGVKLSNDE-------ST 64 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C C CP G+ A+AI K++L+ + Sbjct: 65 GLLTCLGCRACDLVCPAGIRIAEAIHDAKVLLVKAAL 101 >gi|294495593|ref|YP_003542086.1| hypothetical protein Mmah_0921 [Methanohalophilus mahii DSM 5219] gi|292666592|gb|ADE36441.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methanohalophilus mahii DSM 5219] Length = 358 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 7/96 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C CP + P + + + ++ + E Sbjct: 4 YQELADSCIECNKCLDVCPVTKVTGNDSFTPRAKISLLNRIEEGKELTEDEM-------N 56 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C CP + I + + +L ++ Sbjct: 57 NVYLSTRCGACDDVCPVDIPITDIIQRERQLLAEQG 92 >gi|258512493|ref|YP_003185927.1| hypothetical protein Aaci_2533 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479219|gb|ACV59538.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 442 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 6/99 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + CV C C CP+Y D P + + + +D Sbjct: 19 DAPEEEKYSVCVHCGFCLEVCPTYQAWGDENHSPRGRVYLIKACAEGELPLDESVIDP-- 76 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C C CP G+ + + + + + Sbjct: 77 ----VFTCLDCRACETVCPSGVQVGALVEEARGQVFYAR 111 >gi|197119597|ref|YP_002140024.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] gi|197088957|gb|ACH40228.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] Length = 661 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C +C C CP+ WN+++ L P ++ + + + R Sbjct: 284 WKDLYDPDACTLCKRCQDRCPA--WNTEKPLSPMKVVLQIGEVAAATPQADLCR---TVT 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + I +++ L Sbjct: 339 EDVLWDCTTCRACQEICPAEIEHVNKILEMRRNLA 373 >gi|298292977|ref|YP_003694916.1| hypothetical protein Snov_3022 [Starkeya novella DSM 506] gi|296929488|gb|ADH90297.1| protein of unknown function DUF224 cysteine-rich region domain protein [Starkeya novella DSM 506] Length = 640 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 25/148 (16%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 F Q + L +P+ ++ G C+ C C +CP++ Sbjct: 200 PRPGRFEGQLATALAPLDLDTPRLGAATPSDFA-FNRLIGFDACIQCGRCEVACPAFAA- 257 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGER----------------------LDNLEDPFRL 224 + L P L+Q + + P L Sbjct: 258 -GQPLNPKRLIQDLAASLQPNATNASYAGSPYPNARPVAGIGGPAKPIVGAGAMIHPDTL 316 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + C T C + CP + AI +++ Sbjct: 317 WSCTTCRACVEECPMMIEHVDAIVELRR 344 >gi|258655361|ref|YP_003204517.1| hypothetical protein Namu_5262 [Nakamurella multipartita DSM 44233] gi|258558586|gb|ACV81528.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nakamurella multipartita DSM 44233] Length = 737 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 38/158 (24%), Gaps = 46/158 (29%) Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWW---------------- 185 + P+ + ED C C C + CP++ Sbjct: 271 EEADPEVDTFGVGKVEDFSWKGWLDFATCTECGRCQSQCPAWNTAKPLSPKLLVLSLRDH 330 Query: 186 ---------------------NSDRYLGPAILLQAYRWLIDSRD-------EFQGERLDN 217 + L L R + G ++ Sbjct: 331 SFAKAPYLAAGGGTAPDGAEKMGEAELAAFAHADPLAMLEAGRPLVGGPDVDADGNQIGG 390 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C + C + CP + I ++ + Sbjct: 391 VIDPGILWDCTSCGACVEQCPVDIEHVDHIVDMRRYQV 428 >gi|325969327|ref|YP_004245519.1| hypothetical protein VMUT_1816 [Vulcanisaeta moutnovskia 768-28] gi|323708530|gb|ADY02017.1| hypothetical protein VMUT_1816 [Vulcanisaeta moutnovskia 768-28] Length = 388 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 15/182 (8%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIA-----VYPLPHMSVIKDLVVDMSHFYSQH 136 + + + DG + I+ I +YP ++++ + Sbjct: 212 TSVVPTVHIVYDGVEKIVPTLYHAMIETLIQAAYAGLYPPTYVNLTAGPSSTADVEMYRV 271 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL-GPAI 195 + + ++ +D + + C+ C CS CP+YW R+ P Sbjct: 272 SPAQGPKEFHMVLIDNGRRKAAKD-PILWEILLCIRCGRCSMHCPTYWAVGPRFGKPPYT 330 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 W +R + L C NC + CP G++ K I +K L Sbjct: 331 GPMGIPWTAVTRGIMEAGPAAML--------CTHSGNCKEVCPMGIDLPKLILHVKEEYL 382 Query: 256 DR 257 + Sbjct: 383 KQ 384 >gi|209524003|ref|ZP_03272555.1| protein of unknown function DUF224 cysteine-rich region domain protein [Arthrospira maxima CS-328] gi|209495675|gb|EDZ95978.1| protein of unknown function DUF224 cysteine-rich region domain protein [Arthrospira maxima CS-328] Length = 468 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 7/98 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 D + CV C C +CPSY P + +L+D+ ++ + Sbjct: 44 PPPDLINTCVHCGFCLATCPSYRVIGKEMDSPRGRI----YLMDAINKGEAPLAKA--TS 97 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C +CP G+ + IA + ++R + Sbjct: 98 EHFDSCLGCLACVTTCPSGVQYDRLIAATRPQ-VERNV 134 >gi|225023236|ref|ZP_03712428.1| hypothetical protein EIKCOROL_00088 [Eikenella corrodens ATCC 23834] gi|224944060|gb|EEG25269.1| hypothetical protein EIKCOROL_00088 [Eikenella corrodens ATCC 23834] Length = 484 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 21/96 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 318 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEILSPHLLGLEPTRDLPTA--------- 368 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP + + + +++ Sbjct: 369 -----CTMCGACVEVCPVKIPITEQMQRLREEAQRA 399 >gi|162146569|ref|YP_001601028.1| glycolate oxidase iron-sulfur subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209543434|ref|YP_002275663.1| hypothetical protein Gdia_1266 [Gluconacetobacter diazotrophicus PAl 5] gi|161785144|emb|CAP54689.1| putative glycolate oxidase iron-sulfur subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209531111|gb|ACI51048.1| protein of unknown function DUF224 cysteine-rich region domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 437 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 6/101 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + D + CV C C + CP+Y + P + + + + Sbjct: 10 RRDSDIALAADIIDACVHCGICLSHCPTYQVRHEENDSPRGRIFLMKDMYEKGGAPDART 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +L+ RC T + C CP G+ +K I + + Sbjct: 70 VLHLD------RCLTCLACEAICPSGVEYSKLIGPGRAYVA 104 >gi|110636548|ref|YP_676755.1| oxidoreductase [Cytophaga hutchinsonii ATCC 33406] gi|110279229|gb|ABG57415.1| possible oxidoreductase, Fe-S subunit [Cytophaga hutchinsonii ATCC 33406] Length = 440 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 25/114 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + Y C C C+ CP+ + L P + ++D+RD Sbjct: 298 WKNLLDAYSCTECGRCTQQCPANIT--GKKLSPR------KIMMDTRDRLEEVGKNIKQH 349 Query: 209 ----EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDR 257 + L + L C T C ++CP ++P I +++ L++ Sbjct: 350 GADYDDGKALLGDYISQEELLACTTCNACVEACPVTIDPVSIIMQLRRFKLMEE 403 >gi|309790445|ref|ZP_07685006.1| hypothetical protein OSCT_0957 [Oscillochloris trichoides DG6] gi|308227493|gb|EFO81160.1| hypothetical protein OSCT_0957 [Oscillochloris trichoides DG6] Length = 717 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 33/117 (28%), Gaps = 25/117 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------------- 206 ++ C+ C C + CP++ S L P ++ L S Sbjct: 304 WKRRMDFDACMRCGRCQSVCPAH--TSGAPLSPKYIISKLADLQRSEPIHFKDGSVKLVA 361 Query: 207 ---------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D NL L+ C T C CP + I ++ L Sbjct: 362 DLEPAEEAKLDIETLPLYGNLFSEHELWACTTCYACVHECPAMIEHVDDIVDMRRNL 418 >gi|206602791|gb|EDZ39272.1| D-lactate dehydrogenase (Cytochrome) [Leptospirillum sp. Group II '5-way CG'] Length = 945 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 18/134 (13%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + Q +++ ++P + + + C C C+T CPS+ + Sbjct: 501 MFEQTKALFDPHGLLNPGVKISRVSFLDHIDVPRVVQPCATCGKCNTVCPSFDVLRQESM 560 Query: 192 GPAILLQAYRWLIDS--RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 G Y+ L D RD E LD C +C CP G++ + I + Sbjct: 561 GARGW---YQILTDPAFRDNPPEEVLD---------SCLNCKSCRTVCPAGVDVSSVILE 608 Query: 250 IKMML----LDRKI 259 + L RKI Sbjct: 609 ARARFRADSLTRKI 622 >gi|220923317|ref|YP_002498619.1| hypothetical protein Mnod_3399 [Methylobacterium nodulans ORS 2060] gi|219947924|gb|ACL58316.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium nodulans ORS 2060] Length = 629 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 20/112 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C T+CP++ D G + AY + Sbjct: 230 WNRLLSFDACVQCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPADPAYAGSPYPGVDEG 289 Query: 212 G--------ERL---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RL D P L+ C T C + CP + AI ++ Sbjct: 290 PCPGSGGPLVRLVGSDAQIHPDTLWSCTTCRACVEECPMMIEHVDAIVSLRR 341 >gi|145590737|ref|YP_001152739.1| hypothetical protein Pars_0492 [Pyrobaculum arsenaticum DSM 13514] gi|145282505|gb|ABP50087.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 387 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D LY CV C C ++CP+Y P L R +I+ R +G+ L+ L+ Sbjct: 1 MTAFDELYRCVHCGFCLSTCPTYLATGLEGSSPRGRLYLMRAVIEGRARAEGKLLEYLD- 59 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKA 246 C + C +CP G+ + Sbjct: 60 -----ACVYCLRCETACPSGVKYGEV 80 >gi|39997888|ref|NP_953839.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] gi|39984833|gb|AAR36189.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] Length = 661 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 13/98 (13%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGER--LDNLED----- 220 C C C CP+ + L P ++ + L + +G L + D Sbjct: 275 CTKCGRCQQVCPANIT--GKPLNPRQVVNDIKVNLLANGPLLKRGGVPTLPLIGDGGPGS 332 Query: 221 --PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ C + C ++CP + I ++ L++ Sbjct: 333 VSEESIWACTSCGACMEACPVFIEHLPKIVGMRRHLVE 370 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGL-----NPAKAIAKIKMMLL 255 ++D F + C C Q CP + NP + + IK+ LL Sbjct: 266 VKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVVNDIKVNLL 308 >gi|331698550|ref|YP_004334789.1| hypothetical protein Psed_4790 [Pseudonocardia dioxanivorans CB1190] gi|326953239|gb|AEA26936.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudonocardia dioxanivorans CB1190] Length = 429 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 13/101 (12%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNL 218 + + L +CV C C +CP+Y P + DE GE +D Sbjct: 11 PQREVLDDCVHCGFCLPTCPTYAVTGTETESPRGRIYLMDLAAQGTIGVDEAFGEHID-- 68 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C +CP G+ + I ++ ++R + Sbjct: 69 -------SCLGCLACVTACPSGVQYDRLIESVRPQ-VERNV 101 >gi|262275706|ref|ZP_06053515.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Grimontia hollisae CIP 101886] gi|262219514|gb|EEY70830.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Grimontia hollisae CIP 101886] Length = 944 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE---DPFRL 224 C+ C C CPS + L P + YR L E +R L+ D + Sbjct: 544 DRCIECGFCEAVCPSRALS----LSPRQRIVIYRELSRLEREGIDDRYHELKKAFDYLGV 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N I +I+ Sbjct: 600 DTCAATGLCAERCPVGINTGDLIKQIR 626 >gi|41033587|emb|CAF18460.1| putative fumarate reductase Fe-S protein subunit B, succinate dehydrogenase/fumarate reductase Fe-S [Thermoproteus tenax] Length = 100 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN 91 + R+ G Y VD D +LD L+ +++ +D +L R +CR GICG+C + Sbjct: 7 VKRYR---DGAQYEQKYTVDAD-SNTTILDLLIKVRDDLDGSLAFRYACRMGICGACMVK 62 Query: 92 IDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDM 129 I+GT LAC + D A+ V PL V+KDL+ ++ Sbjct: 63 INGTPRLACATKISDLGTNAVYVEPLTD-KVVKDLIAEL 100 >gi|319942240|ref|ZP_08016555.1| hypothetical protein HMPREF9464_01774 [Sutterella wadsworthensis 3_1_45B] gi|319804113|gb|EFW01013.1| hypothetical protein HMPREF9464_01774 [Sutterella wadsworthensis 3_1_45B] Length = 680 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 7/100 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-----WLIDSRDEFQGERL 215 L CV C C+ CP+ + L P ++ R + D + Sbjct: 284 WTDRAQLDACVECGRCNDVCPAVRAGTP--LKPRTVVLKLRDRVRAAAAGADDANADDLA 341 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L+ C T C CP + I ++ L Sbjct: 342 GGVVTKDELFSCTTCGACAAVCPADIQTPDFIVGLRRHLA 381 >gi|78223468|ref|YP_385215.1| hypothetical protein Gmet_2264 [Geobacter metallireducens GS-15] gi|78194723|gb|ABB32490.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 661 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 9/143 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLYECV 171 +P+ + L ++ F++ + + E + + + I C Sbjct: 234 IPYSKLRHILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACT 293 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C CP+Y P ++ + + + + L + L+ C T Sbjct: 294 SCKRCQERCPAYATGK-----PLSPMKVIQQVGEVAENDAAASLCDTVGQDVLWSCTTCR 348 Query: 232 NCTQSCPKGLNPAKAIAKIKMML 254 C CP I +++ L Sbjct: 349 ACQDICPANNEHVNKILEMRRNL 371 >gi|298506821|gb|ADI85544.1| iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 661 Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 13/98 (13%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGER--LDNLED----- 220 C C C CP+ + L P ++ + L + +G L + D Sbjct: 275 CTKCGRCQQVCPANIT--GKPLNPRQVVNDIKVNLLANGPLLKRGGVPTLPLIGDGGPGS 332 Query: 221 --PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ C + C ++CP + I ++ L++ Sbjct: 333 VSEESIWACTSCGACMEACPVFIEHLPKIVGMRRHLVE 370 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGL-----NPAKAIAKIKMMLL 255 ++D F + C C Q CP + NP + + IK+ LL Sbjct: 266 VKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVVNDIKVNLL 308 >gi|30249634|ref|NP_841704.1| glycolate oxidase iron-sulfur subunit [Nitrosomonas europaea ATCC 19718] gi|30138997|emb|CAD85581.1| glycolate oxidase iron-sulfur subunit [Nitrosomonas europaea ATCC 19718] Length = 424 Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 6/89 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y P + + R + +++ Sbjct: 17 EANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVASGRIPLNERFIQHMD------ 70 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC T C Q CP + + I ++M+ Sbjct: 71 RCLTCRACEQVCPNNVAYGQLIDGARVMI 99 >gi|317122238|ref|YP_004102241.1| hypothetical protein Tmar_1401 [Thermaerobacter marianensis DSM 12885] gi|315592218|gb|ADU51514.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermaerobacter marianensis DSM 12885] Length = 485 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C ++CP+Y + P + + ++ G + RC Sbjct: 24 CVHCGFCLSACPTYLVLGEEMDSPRGRIYLLKEALEGGIPLAGSV------AEHVDRCLG 77 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CP G+ + + + + +R Sbjct: 78 CLACVSACPSGVRYGELLTPFRALREERA 106 >gi|226356129|ref|YP_002785869.1| cysteine-rich domain-containing Fe-S oxidoreductase [Deinococcus deserti VCD115] gi|226318119|gb|ACO46115.1| putative Cysteine-rich domain-containing Fe-S oxidoreductase; putative membrane protein [Deinococcus deserti VCD115] Length = 1054 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 20/137 (14%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + +E ++ P+ E L+ E ++ Y C+ C C CP+ + L PA Sbjct: 270 MKGLEEAMEQEEPRLGVEKLEDLE-WPRLLDAYACIQCNRCQDVCPANAT--GKALSPAA 326 Query: 196 LLQAYRWLID-----------------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L R ++ + L+ ++ C T C + CP Sbjct: 327 LEINKRMELNVIAAHPSPFTLKPAAFETGASTAHPLLEYAISEEAVWACTTCGACMEVCP 386 Query: 239 KGLNPAKAIAKIKMMLL 255 I I+ + Sbjct: 387 VQDEQMLDIIDIRRHQV 403 >gi|148244455|ref|YP_001219149.1| glycolate oxidase iron-sulfur subunit GlcF [Candidatus Vesicomyosocius okutanii HA] gi|146326282|dbj|BAF61425.1| glycolate oxidase iron-sulfur subunit GlcF [Candidatus Vesicomyosocius okutanii HA] Length = 374 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 8/99 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + + +CV C C +CP+Y + P + + ++++ + + Sbjct: 8 NMEANNIIRKCVHCGFCLATCPTYQLLGNELDSPRGRIYLIKSVLENHHFSKKSIV---- 63 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L RC T +C +CP G+ + + I L+++K Sbjct: 64 ---HLDRCLTCRSCETTCPSGVEYVQLV-NIGRKLVEQK 98 >gi|16082498|ref|NP_393676.1| Fe-S oxidoreductase [Thermoplasma acidophilum DSM 1728] Length = 670 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C +CP+Y + L P ++Q + + + + + + Sbjct: 291 YMTAAMACTDCGRCERACPAYASGTG--LDPRAVVQNLKKTV----GTETDLVPVILTEN 344 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C T M C + CP + P + + + L+ Sbjct: 345 AAWSCTTCMACVEECPVLIRPYNFVTETRRNLVME 379 >gi|51246904|ref|YP_066788.1| iron-sulfur binding reductase [Desulfotalea psychrophila LSv54] gi|50877941|emb|CAG37781.1| related to iron-sulfur binding reductase [Desulfotalea psychrophila LSv54] Length = 649 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 45/151 (29%), Gaps = 10/151 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMC 173 LP + + + + + + + +Q D D + C C Sbjct: 214 LPFGKHMHIITAIPNCLFGAIDKVNTVPREEFAENNSYGVQEANDFTWKDIIDSFTCTEC 273 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--SRDEFQGERLDNLED------PFRLY 225 C CP+ + + I Y + + + + + D ++ Sbjct: 274 GRCQKVCPATLTDKELVPRTLIEQIKYNLIANQAELKAGKPVSYNLIGDGEKSISKEAIW 333 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C T C Q CP + I K++ L+ Sbjct: 334 SCLTCGACMQQCPVLIEHVPKIIKMRRHLVQ 364 >gi|218782887|ref|YP_002434205.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764271|gb|ACL06737.1| Putative heterodisulfide reductase, hybrid of subunits C and E [Desulfatibacillum alkenivorans AK-01] Length = 587 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 6/112 (5%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN---SDRYLGPAILLQAYRWLIDS 206 + L + ++ L CV C CS +C + + ++ + P+ +Q+ + L + Sbjct: 317 MDENSLPENIATRQAMELDACVHCCTCSNTCSAMMASVTSGNKLVLPSEKMQSLKKLANG 376 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + L+ + + +Y C CT CP G+ I+ L+ ++ Sbjct: 377 -GELNADELEAV--SYGVYMCTNCNRCTAVCPSGIILKDLWMSIRESLIQKQ 425 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 21/189 (11%) Query: 82 EGICGSCGMNIDGTNTLACVK-------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 C C L + K + + PL + + + Sbjct: 394 CTNCNRCTAVCPSGIILKDLWMSIRESLIQKQKAQPMVLTPLSFFRGYNRARIAPETYGA 453 Query: 135 QHRSIEPWLKTVSP----KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW--WNSD 188 + + + K A + + C C C+T CP N + Sbjct: 454 PAQKAQDAVAGKFEQLAAKDASIDITQASSAEANPMFAYCFGCQTCTTVCPVVGSFENPE 513 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 LG + Q L +E ++ C T C + CP+ + A + Sbjct: 514 EELG-LVPHQIMCSLAMGLEE-------MASGSKMIWDCLTCYQCQEHCPQKVPVADILY 565 Query: 249 KIKMMLLDR 257 +K M R Sbjct: 566 DLKNMAAAR 574 >gi|325266549|ref|ZP_08133226.1| iron-sulfur cluster binding protein [Kingella denitrificans ATCC 33394] gi|324981992|gb|EGC17627.1| iron-sulfur cluster binding protein [Kingella denitrificans ATCC 33394] Length = 484 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 21/96 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 318 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEILSPHLLGLEPTRDLPTA--------- 368 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP + + + +++ Sbjct: 369 -----CTMCGACVEVCPVKIPITEQMQRLREEAQRA 399 >gi|291297126|ref|YP_003508524.1| hypothetical protein Mrub_2756 [Meiothermus ruber DSM 1279] gi|290472085|gb|ADD29504.1| protein of unknown function DUF224 cysteine-rich region domain protein [Meiothermus ruber DSM 1279] Length = 425 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C C +CP+Y + P + + +++ L E Sbjct: 17 MAHAIEACVHCGFCLPACPTYQVLGEEMDSPRGRIFLMKEVLEGN-------LSMEEAQP 69 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L +C C +CP G+ + I Sbjct: 70 YLDKCLGCQGCVTACPSGVPYGELI 94 >gi|315442162|ref|YP_004075041.1| Fe-S oxidoreductase [Mycobacterium sp. Spyr1] gi|315260465|gb|ADT97206.1| Fe-S oxidoreductase [Mycobacterium sp. Spyr1] Length = 1044 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 52/207 (25%), Gaps = 60/207 (28%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P K L + E + A ED Sbjct: 233 HSKHLHIGLAPINVTFKRLPNGLGPLLPVESKGELVDFEDPAEDAVLGRGKIEDFTWKGY 292 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSR--------- 207 C C C + CP+ WN+ + L P +++ R + +D + Sbjct: 293 LDFTTCTECGRCQSQCPA--WNTGKPLSPKLVIMNLRDHMFAKAPYFLDGKKSPLENTPE 350 Query: 208 ---------------------DEFQGERLDN------------------LEDPFRLYRCH 228 E ER+ + DP L+ C Sbjct: 351 GGLGEELRGEKHSEKHSHEHVPESGFERIPADSPLQATRPLVGTLEEGGVIDPDVLWSCT 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C + CP + I ++ + Sbjct: 411 TCGACVEQCPVDIEHIDHIVDMRRYQV 437 >gi|145220882|ref|YP_001131560.1| hypothetical protein Mflv_0278 [Mycobacterium gilvum PYR-GCK] gi|145213368|gb|ABP42772.1| protein of unknown function DUF224, cysteine-rich region domain protein [Mycobacterium gilvum PYR-GCK] Length = 1044 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 52/207 (25%), Gaps = 60/207 (28%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P K L + E + A ED Sbjct: 233 HSKHLHIGLAPINVTFKRLPNGLGPLLPVESKGELVDFEDPAEDAVLGRGKIEDFTWKGY 292 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSR--------- 207 C C C + CP+ WN+ + L P +++ R + +D + Sbjct: 293 LDFTTCTECGRCQSQCPA--WNTGKPLSPKLVIMNLRDHMFAKAPYFLDGKESPLENTPE 350 Query: 208 ---------------------DEFQGERLDN------------------LEDPFRLYRCH 228 E ER+ + DP L+ C Sbjct: 351 GGLGEELRGEKHSEKHSHEHVPESGFERIPADSPLQATRPLVGTLEEGGVIDPDVLWSCT 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C + CP + I ++ + Sbjct: 411 TCGACVEQCPVDIEHIDHIVDMRRYQV 437 >gi|307151328|ref|YP_003886712.1| hypothetical protein Cyan7822_1441 [Cyanothece sp. PCC 7822] gi|306981556|gb|ADN13437.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cyanothece sp. PCC 7822] Length = 460 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 37/131 (28%), Gaps = 20/131 (15%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 V L +F Q ++ + PK + CV C C ++C Sbjct: 8 VNNSLESSSFNFQKQLEEVKGFDPKNPPKQE--------------LIDSCVHCGFCLSTC 53 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSY P + + + C + C +CP G Sbjct: 54 PSYRVIGKEMDSPRGRIYLMNGINKGQAALDE------TTTQHFDTCLGCLACVSTCPSG 107 Query: 241 LNPAKAIAKIK 251 + + IA + Sbjct: 108 VKYDQLIATTR 118 >gi|163758389|ref|ZP_02165477.1| glycolate oxidase iron-sulfur subunit [Hoeflea phototrophica DFL-43] gi|162284678|gb|EDQ34961.1| glycolate oxidase iron-sulfur subunit [Hoeflea phototrophica DFL-43] Length = 446 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L +CV C C+ +CP+Y + P + + ++++ + + +++ Sbjct: 16 AESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENDRPADKQVVTHID- 74 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC + + C +CP G+N + + + Sbjct: 75 -----RCLSCLACMTTCPSGVNYMHLVDHARAHIEK 105 >gi|10639342|emb|CAC11344.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 637 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C +CP+Y + L P ++Q + + + + + + Sbjct: 258 YMTAAMACTDCGRCERACPAYASGTG--LDPRAVVQNLKKTV----GTETDLVPVILTEN 311 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C T M C + CP + P + + + L+ Sbjct: 312 AAWSCTTCMACVEECPVLIRPYNFVTETRRNLVME 346 >gi|332971139|gb|EGK10104.1| iron-sulfur cluster binding protein [Kingella kingae ATCC 23330] Length = 483 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 21/96 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEILSPHLLGLETTRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVKIPITEQMQRLREEAQRA 398 >gi|119387102|ref|YP_918157.1| hypothetical protein Pden_4397 [Paracoccus denitrificans PD1222] gi|119377697|gb|ABL72461.1| protein of unknown function DUF224, cysteine-rich region domain protein [Paracoccus denitrificans PD1222] Length = 431 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + L CV C C+ +CP+Y D P + + D Sbjct: 2 QTNFTPQQLADPGTARANEILRSCVHCGFCTATCPTYKVLGDELDSPRGRIY---LIKDM 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + + RC + ++C +CP G++ + + + Sbjct: 59 LENGKVPDAKTVG---HIDRCLSCLSCMTTCPSGVHYMHLVDHAREYIEK 105 >gi|331698545|ref|YP_004334784.1| hypothetical protein Psed_4785 [Pseudonocardia dioxanivorans CB1190] gi|326953234|gb|AEA26931.1| protein of unknown function DUF224 cysteine-rich region domain protein [Pseudonocardia dioxanivorans CB1190] Length = 459 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + L +CV C C +CP+Y + P + +L+D ++ LE Sbjct: 27 PQRELLDDCVHCGFCLPTCPTYQLWGEEMDSPRGRI----YLMDLAEKGD----IALEGS 78 Query: 222 F--RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 F + RC M C +CP G+ + + ++ ++R + Sbjct: 79 FATHIDRCLGCMACVTACPSGVQYDRLLESVRPQ-VERNV 117 >gi|269928810|ref|YP_003321131.1| hypothetical protein Sthe_2901 [Sphaerobacter thermophilus DSM 20745] gi|269788167|gb|ACZ40309.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sphaerobacter thermophilus DSM 20745] Length = 718 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%) Query: 133 YSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDR 189 + + + + + + ED L C+ C C CP++ + Sbjct: 249 FRRLKPVGALDPIENIEEAEVFGAGKLEDFTWAQLLNVDACMHCGRCLEYCPTFNT--GK 306 Query: 190 YLGPA-ILLQAYRWLIDS-----------------RDEFQGER--LDNLEDPFRLYRCHT 229 L P ++L+ ++ D R +R + ++ P L+ C T Sbjct: 307 PLRPRDVVLELAGYMADRGGIFSGELGQGENSARYRWGAGPDRALIPDVVSPAELWDCTT 366 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLL 255 C CP + I ++ L+ Sbjct: 367 CGACMAQCPVYIEHVPLIVGMRRHLV 392 >gi|118602349|ref|YP_903564.1| hypothetical protein Rmag_0315 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567288|gb|ABL02093.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 374 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +CV C C +CP+Y D P + + +++ + + R Sbjct: 12 NDIIRKCVHCGFCLATCPTYQLLGDELDSPRGRIYLIKSALENHHFSKQSII-------R 64 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L RC T +C +CP G+ + + I +++K Sbjct: 65 LDRCLTCRSCETTCPSGVEYGQLV-NIGREFVEQK 98 >gi|186472159|ref|YP_001859501.1| hypothetical protein Bphy_3299 [Burkholderia phymatum STM815] gi|184194491|gb|ACC72455.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phymatum STM815] Length = 639 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRW--------L 203 ++ CV C C +CP++ D G A + Sbjct: 243 WNQLLSFDACVQCGKCEAACPAFAAGQPLNPKKLIQDLVTGMVGGNDAAYAGSPTPGIKV 302 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 E Q + +L + ++ C T C CP + AI ++ Sbjct: 303 GQHGGEPQRPIISSLIEADTVWSCTTCRACVHECPMLIEHVDAIVDMRR 351 >gi|269928854|ref|YP_003321175.1| hypothetical protein Sthe_2949 [Sphaerobacter thermophilus DSM 20745] gi|269788211|gb|ACZ40353.1| protein of unknown function DUF162 [Sphaerobacter thermophilus DSM 20745] Length = 735 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 8/102 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L + ED + +D LY C+ C CS CP Y G L Sbjct: 304 LAAREDPELVDTLY-CIRCGACSNVCPPYQVVGGHLFGHIYTGPIGLPL-----TALHHG 357 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 LD DP L C + C CP G+ + I +++ + + Sbjct: 358 LDAAADPQSL--CVSCNACELVCPAGIPIPRLILEVRSRVTE 397 >gi|328545091|ref|YP_004305200.1| glycolate oxidase iron-sulfur subunit [polymorphum gilvum SL003B-26A1] gi|326414833|gb|ADZ71896.1| Glycolate oxidase iron-sulfur subunit [Polymorphum gilvum SL003B-26A1] Length = 449 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ + L +CV C C+ +CP++ D P + + ++++ Sbjct: 2 QTNFTPEQLRDAHVAESEKILRKCVHCGFCTATCPTFALLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D R+ + RC + ++C +CP G++ + + Sbjct: 62 -DRPADARIVK-----HIDRCLSCLSCMTTCPSGVHYMHLVDHAR 100 >gi|83588912|ref|YP_428921.1| hypothetical protein Moth_0039 [Moorella thermoacetica ATCC 39073] gi|83571826|gb|ABC18378.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 431 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 RQ+ + + C C C CP+Y + + + R ++ + + E + Sbjct: 6 RQREEDIVRCNRCGFCEEVCPTYKATGEEFSLARGRNRLMRQSMEGKLDLTKE--PEINQ 63 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C C +CP + I + + K Sbjct: 64 --HIYSCLLCGACVAACPSSVITDTLIKTARAEITRAK 99 >gi|158335885|ref|YP_001517059.1| glycolate oxidase subunit [Acaryochloris marina MBIC11017] gi|158306126|gb|ABW27743.1| glycolate oxidase subunit [Acaryochloris marina MBIC11017] Length = 467 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + CV C C ++CPSY P + L + + Sbjct: 35 IDSCVHCGFCLSTCPSYRVIGKETDSPRGRVYLMNGLNQGDFTLTDAAVGH------FDT 88 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + C +CP G+ + I + + Sbjct: 89 CLGCLACVSTCPSGVEYDQLITSTRAQI 116 >gi|76801351|ref|YP_326359.1| iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] gi|76557216|emb|CAI48791.1| iron-sulfur protein (probable glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] Length = 739 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 10/106 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL-- 215 +++ C C CS+ CP+ S R L P ++ + YR +++ D+ + + Sbjct: 301 WKEMLDQDACTKCGRCSSVCPAKA--SGRPLDPRDVILDLKEYRRSLETDDDAETMDIVA 358 Query: 216 ---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +++ D + C + M C +CP + K+ ++ L D+ Sbjct: 359 DGGESVIDAETMESCMSCMACMDACPVEIEHLKSFTRMNRQLADQG 404 >gi|332559491|ref|ZP_08413813.1| glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides WS8N] gi|332277203|gb|EGJ22518.1| glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides WS8N] Length = 433 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTDEQLQDPGVARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEA 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-------KAIAKI-KMMLLDR 257 + +++ RC + C +CP G++ I K + L +R Sbjct: 62 GRPADARTVKHID------RCLGCLACMTTCPSGVHYMHLVDHARDHIEKTYRRPLFER 114 >gi|297181918|gb|ADI18095.1| Fe-S oxidoreductase [uncultured Acidobacteriales bacterium HF0200_23L05] Length = 445 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C +CP+Y P + + ++ + + E + Sbjct: 19 LADCVHCGFCLPACPTYALWQRETDSPRGRIHLMKVALEGKADITVEFARH------FDT 72 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C M C +CP G+ K + + L +R+I Sbjct: 73 CLGCMACVTACPSGVQYDKLVEATRPQL-ERQI 104 >gi|77464598|ref|YP_354102.1| glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides 2.4.1] gi|77389016|gb|ABA80201.1| Glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides 2.4.1] Length = 433 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTDEQLQDPGVARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEA 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-------KAIAKI-KMMLLDR 257 + +++ RC + C +CP G++ I K + L +R Sbjct: 62 GRPADARTVKHID------RCLGCLACMTTCPSGVHYMHLVDHARDHIEKTYRRPLFER 114 >gi|126463438|ref|YP_001044552.1| hypothetical protein Rsph17029_2678 [Rhodobacter sphaeroides ATCC 17029] gi|126105102|gb|ABN77780.1| protein of unknown function DUF224, cysteine-rich region domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 433 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTDEQLQDPGVARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEA 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-------KAIAKI-KMMLLDR 257 + +++ RC + C +CP G++ I K + L +R Sbjct: 62 GRPADARTVKHID------RCLGCLACMTTCPSGVHYMHLVDHARDHIEKTYRRPLFER 114 >gi|126459834|ref|YP_001056112.1| hypothetical protein Pcal_1221 [Pyrobaculum calidifontis JCM 11548] gi|126249555|gb|ABO08646.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum calidifontis JCM 11548] Length = 385 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D +Y+CV C C +CP+Y + P L R +++ R + L+ L+ Sbjct: 5 YDEVYKCVHCGFCLPTCPTYLATGVEGMSPRGRLYLIRAVLEGRARPTKDLLEYLD---- 60 Query: 224 LYRCHTIMNCTQSCPKGLNPA 244 C + C +CP G+ Sbjct: 61 --ACVYCLRCETACPSGVKYG 79 >gi|221640510|ref|YP_002526772.1| glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides KD131] gi|221161291|gb|ACM02271.1| Glycolate oxidase iron-sulfur subunit [Rhodobacter sphaeroides KD131] Length = 433 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E LQ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTTFTDEQLQDPGVARSNEILRACVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEA 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-------KAIAKI-KMMLLDR 257 + +++ RC + C +CP G++ I K + L +R Sbjct: 62 GRPADARTVKHID------RCLGCLACMTTCPSGVHYMHLVDHARDHIEKTYRRPLFER 114 >gi|288961707|ref|YP_003452017.1| hypothetical protein AZL_c01800 [Azospirillum sp. B510] gi|288913987|dbj|BAI75473.1| hypothetical protein AZL_c01800 [Azospirillum sp. B510] Length = 645 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 37/128 (28%), Gaps = 24/128 (18%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-------- 198 P ++ G CV C C T+CP+Y L P L+Q Sbjct: 232 GPGALGVERPIDFAWNRLLGFDACVQCGRCETACPAYAAGLP--LNPKKLVQDLVAAMDS 289 Query: 199 -----AYRWLIDSRDEFQGER---------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 AY D + P L+ C T C Q CP + Sbjct: 290 QASDAAYAGNPHPGRGVGEAHGGAALPLIGPDAMIHPDTLWSCTTCRACVQECPMMIEHV 349 Query: 245 KAIAKIKM 252 A+ ++ Sbjct: 350 DAVVDLRR 357 >gi|269468673|gb|EEZ80309.1| glycolate oxidase iron-sulfur subunit GlcF [uncultured SUP05 cluster bacterium] Length = 374 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 8/106 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 ++ + + + +CV C C +CP+Y D P + + S ++ Sbjct: 1 MQTDHIQNFKANEIIRKCVHCGFCLATCPTYQLLGDELDSPRGRIY---LIKSSLEDNHF 57 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L L RC T C +CP G+ + I ++ K Sbjct: 58 SDQSILH----LDRCLTCRACETTCPSGVEYGNLV-DIGREFIESK 98 >gi|172038621|ref|YP_001805122.1| glycolate oxidase subunit (Fe-S) protein [Cyanothece sp. ATCC 51142] gi|171700075|gb|ACB53056.1| glycolate oxidase subunit (Fe-S) protein [Cyanothece sp. ATCC 51142] Length = 455 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ K + + CV C C ++CPSY P + + + + Sbjct: 24 FDSKNPPKQELIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRIYLMDAINNGQAALDE--- 80 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ I+ + Sbjct: 81 ---TTTQHFDSCLGCLACVSTCPSGVQYDNLISATR 113 >gi|197123353|ref|YP_002135304.1| hypothetical protein AnaeK_2951 [Anaeromyxobacter sp. K] gi|196173202|gb|ACG74175.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter sp. K] Length = 438 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ECV C C CP++ + P + +R L + + Sbjct: 20 RTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAH------ 73 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC M C +CP G+ I + + Sbjct: 74 FDRCLGCMACLGACPSGVRYDHVIDAARARVERE 107 >gi|220918142|ref|YP_002493446.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955996|gb|ACL66380.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 438 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ECV C C CP++ + P + +R L + + Sbjct: 20 RTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAH------ 73 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC M C +CP G+ I + + Sbjct: 74 FDRCLGCMACLGACPSGVRYDHVIDAARARVERE 107 >gi|86159287|ref|YP_466072.1| hypothetical protein Adeh_2865 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775798|gb|ABC82635.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 438 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 6/92 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 ECV C C CP++ + P + +R L + + Sbjct: 22 PADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAH------FD 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC M C +CP G+ I + + Sbjct: 76 RCLGCMACLGACPSGVRYDHVIDAARARVERE 107 >gi|319944519|ref|ZP_08018790.1| glycolate oxidase, iron-sulfur subunit [Lautropia mirabilis ATCC 51599] gi|319742232|gb|EFV94648.1| glycolate oxidase, iron-sulfur subunit [Lautropia mirabilis ATCC 51599] Length = 457 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A+ L + + L CV C C+ +CP+Y D P + + +++ Sbjct: 2 ETHLAERFLNTPDGEVAERILRACVHCGFCTATCPTYQILGDEQDSPRGRIYLMKQVLEG 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L RC T NC +CP G++ ++ + I ++ ++ Sbjct: 62 -------ATPTLSTLRHLDRCLTCRNCESTCPSGVHYSRLL-DIGRRVVASEV 106 >gi|296156300|ref|ZP_06839139.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] gi|295893806|gb|EFG73585.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. Ch1-1] Length = 637 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 ++ CV C C +CP++ + L P L+Q + + Sbjct: 241 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAEYAGSPTPGI 298 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + + NL + L+ C T C Q CP + AI ++ Sbjct: 299 PVGKHGGAPRKPLISNLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 349 >gi|298674015|ref|YP_003725765.1| CoB--CoM heterodisulfide reductase [Methanohalobium evestigatum Z-7303] gi|298287003|gb|ADI72969.1| CoB--CoM heterodisulfide reductase [Methanohalobium evestigatum Z-7303] Length = 360 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C + CP + G + L D + L++L C Sbjct: 17 KCVRCGTCRSVCPVFDELGWESSGARGRILVAHALSQGMD-VDSDVLNSLNT------CT 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 T C Q+CP G P I + L+ Sbjct: 70 TCGLCEQNCPSGAKPPDVIEDTRRQLV 96 >gi|33152273|ref|NP_873626.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus ducreyi 35000HP] gi|33148496|gb|AAP96015.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Haemophilus ducreyi 35000HP] Length = 424 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E + C+ C C+ CP N Y GP S Sbjct: 8 ENAQRNTHSVVEHQHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSG 56 Query: 208 DEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + RL + + L C C +CP + I + + ++R+ Sbjct: 57 PDGERLRLKSADFYDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRYVERQ 108 >gi|219667755|ref|YP_002458190.1| CoB--CoM heterodisulfide reductase [Desulfitobacterium hafniense DCB-2] gi|219538015|gb|ACL19754.1| CoB--CoM heterodisulfide reductase [Desulfitobacterium hafniense DCB-2] Length = 641 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 27/122 (22%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---------DEFQ 211 +++ + C C C+ SCP+Y + L P + R ++ R D+ + Sbjct: 234 WKQLFDAFSCAKCGRCNGSCPAYQCGEE--LKPKRMNGRLRKYMEKRSAVFQVSKQDKEK 291 Query: 212 GERLDN----------------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + + + L+ C T C + CP I I+ + Sbjct: 292 QSKKGHKKGQNKAKGQGRIAGGIIEEGYLWSCTTCGACMEVCPVSCEHLTKIIDIRRFFV 351 Query: 256 DR 257 R Sbjct: 352 SR 353 >gi|188583212|ref|YP_001926657.1| hypothetical protein Mpop_4000 [Methylobacterium populi BJ001] gi|179346710|gb|ACB82122.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium populi BJ001] Length = 632 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSD-----------RYLGPAILLQAYRWLIDSRDE 209 ++ CV C C T+CP++ L PA A R Sbjct: 235 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKKLVQDLVAGLSPAEPRYAGNPYPGGR-A 293 Query: 210 FQGER--LDNLEDPFR------LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 QGER L L P L+ C T C + CP + A+ ++ Sbjct: 294 GQGERGALARLIGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRR 344 >gi|302348234|ref|YP_003815872.1| predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15] gi|302328646|gb|ADL18841.1| predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15] Length = 107 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 6/89 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +CV C C + CP+ + R GP + R L++ R E L Y Sbjct: 10 EANKCVYCGFCESVCPTQPFGPHRGYGPRGRVTLLRELLEGRASLSDEVLS------SFY 63 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C+ CP + + + ML Sbjct: 64 SCLLCNACSTVCPARIRVGDLMRMARAML 92 >gi|261856630|ref|YP_003263913.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothiobacillus neapolitanus c2] gi|261837099|gb|ACX96866.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothiobacillus neapolitanus c2] Length = 414 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 7/109 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + R K L CVMC C CP++ + + GP + L Sbjct: 2 DTPTHSTNRSPVKMRIKHHALD-CVMCGICVPHCPTFALSQNEADGPRGRISLALGLAGG 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +L+ C T C CP + I +++ L Sbjct: 61 TLALDAGVVAHLD------GCLTCRACESVCPSLVRYGGLIDEVRDALA 103 >gi|256829218|ref|YP_003157946.1| Heterodisulfide reductase subunit C-like protein [Desulfomicrobium baculatum DSM 4028] gi|256578394|gb|ACU89530.1| Heterodisulfide reductase subunit C-like protein [Desulfomicrobium baculatum DSM 4028] Length = 533 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 17/105 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRY----LGPAILLQAYRWLIDSRDEFQGERLD 216 + + + CV C C+ CP + D L P ++ R + + + L Sbjct: 435 ADRAESFWGCVQCTTCTGVCPVVAVSEDPSRDLDLAPQQIMNLLRMGL------KAQTLG 488 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM---MLLDRK 258 ++ C T C + CP+G+ A + +++ +L +K Sbjct: 489 ARM----VWSCTTCYKCQEHCPQGVPVADILYELRQLGAEILRKK 529 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 7/95 (7%) Query: 167 LYECVMCACCSTSC---PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C C CS C P + + + P L R + R R +L + Sbjct: 309 LDACTRCGQCSLHCSVAPIHRVMGNADILPMDKLSDLRRYLGGR--LSPARTASLTEGSH 366 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CT+ C G++ K L + Sbjct: 367 I--CTECLRCTEVCSAGIDLQDLWMASKKALTEAG 399 >gi|119487234|ref|ZP_01620985.1| hypothetical protein L8106_20957 [Lyngbya sp. PCC 8106] gi|119455789|gb|EAW36924.1| hypothetical protein L8106_20957 [Lyngbya sp. PCC 8106] Length = 469 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + CV C C +CPSY P + + +S Sbjct: 38 FDSKNPPDPNLINTCVHCGFCLATCPSYRVIGKEMDSPRGRIYLMDAINNSEAPLSE--- 94 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C +CP G+ + I+ + ++R I Sbjct: 95 ---TSAQHFDTCLGCLACVSTCPSGVQYDQLISATRPQ-VERNI 134 >gi|238022534|ref|ZP_04602960.1| hypothetical protein GCWU000324_02442 [Kingella oralis ATCC 51147] gi|237867148|gb|EEP68190.1| hypothetical protein GCWU000324_02442 [Kingella oralis ATCC 51147] Length = 482 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQA-YRWLID-SRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + + + +D +RD Sbjct: 317 QCIRCGACMNHCPVYTRVGGAAYGTTYPGPIGEIISPHLMGLDKTRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVKIPITEQMQRLRQEA 395 >gi|326332369|ref|ZP_08198648.1| putative glycolate oxidase, iron-sulfur subunit [Nocardioidaceae bacterium Broad-1] gi|325949858|gb|EGD41919.1| putative glycolate oxidase, iron-sulfur subunit [Nocardioidaceae bacterium Broad-1] Length = 442 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 8/102 (7%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 E L +CV C C +CP+Y + P L + ++ Sbjct: 12 FDEEHPPDQHLLDDCVHCGFCLPTCPTYLLWGEEMDSPRGRLYLMKEGLEGEPMSDSMV- 70 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C M+C +CP G+ I + + ++R Sbjct: 71 ------QHWDNCLGCMSCVTACPSGVRYDTLIEQTRAQ-VER 105 >gi|297585459|ref|YP_003701239.1| hypothetical protein Bsel_3192 [Bacillus selenitireducens MLS10] gi|297143916|gb|ADI00674.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus selenitireducens MLS10] Length = 707 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 53/170 (31%), Gaps = 43/170 (25%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + V +H Q SI + + + D++++ LY CV C C+ CP+ Sbjct: 233 VYVGPTHKRGQLESIN--FEVEDAEKFGKNKIEDFDQKQLLDLYACVECGRCTNMCPASG 290 Query: 185 WNSDRYLGPAILLQAYR---------------WLI-----DSRD------EFQGERLDNL 218 + L P L+ R W+ ++R E L L Sbjct: 291 T--GKMLSPMDLILKMRDHLTDTGAAVTSRSSWMPAFAFSNTRGNQLAAAGGDAEALGKL 348 Query: 219 E-------------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L+ C T NC CP I ++ L+ Sbjct: 349 DFNPYDVNLIGDVITEEELWACTTCRNCEDQCPVMNEHVDKIIDMRRYLV 398 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLD 256 LY C CT CP K L+P I K++ L D Sbjct: 273 LYACVECGRCTNMCPASGTGKMLSPMDLILKMRDHLTD 310 >gi|254563057|ref|YP_003070152.1| iron-sulfur cluster-binding protein [Methylobacterium extorquens DM4] gi|254270335|emb|CAX26331.1| Iron-sulfur cluster-binding protein [Methylobacterium extorquens DM4] Length = 633 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRD--- 208 ++ CV C C T+CP++ D G + AY Sbjct: 236 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGWAA 295 Query: 209 EFQGERLDNLEDPFR------LYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 E L L P L+ C T C + CP + A+ ++ L+R Sbjct: 296 EGARGALARLIGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERG 352 Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 15/144 (10%) Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 LD + +++ T R C SC G AC PL Sbjct: 221 LDAP-RLGSEMPADFTWNRLLSYDACVSC-----GRCETACPAFAAGQ-------PLNPK 267 Query: 120 SVIKDLVVDMSHFYSQHR--SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +I+DLV +S + + A L + R D L+ C C C Sbjct: 268 KLIQDLVAGLSPAEPAYAGNPYPGGWAAEGARGALARLIGPDARIHPDTLWSCTTCRACV 327 Query: 178 TSCPSYWWNSDRYLGPAILLQAYR 201 CP + D + R Sbjct: 328 EECPMMIEHVDAVVSLRRHETLER 351 >gi|296331582|ref|ZP_06874051.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675459|ref|YP_003867131.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296151177|gb|EFG92057.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413703|gb|ADM38822.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. spizizenii str. W23] Length = 444 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ ++R L C+ C C SCP+Y + P + R + Sbjct: 1 MTTNKEMKQIQDEFKERMDEGELLNCMRCGFCLPSCPTYIESGFQETHSPRGRIALMRAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+ + + + + Sbjct: 61 ADGMIEPDEDV------ERSLSLCLGCRACEPVCPSGVKYGQLLEEAR 102 >gi|158422801|ref|YP_001524093.1| putative ferredoxin [Azorhizobium caulinodans ORS 571] gi|158329690|dbj|BAF87175.1| putative ferredoxin [Azorhizobium caulinodans ORS 571] Length = 644 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 23/113 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-------GE 213 ++ G CV C C T+CP++ + L P L+Q ++ D Sbjct: 231 WNRLLGFDACVQCGRCETACPAFAA--GQPLNPKRLVQDLVAAMEGSDSAAYSGSPYPNA 288 Query: 214 R--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + P L+ C T C + CP + A+ ++ Sbjct: 289 RPVARQGGALSPIVGAGAMIHPDTLWSCTTCRACVEECPMMIEHVDAVIDLRR 341 >gi|253573720|ref|ZP_04851063.1| iron-sulphur-binding reductase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847248|gb|EES75253.1| iron-sulphur-binding reductase [Paenibacillus sp. oral taxon 786 str. D14] Length = 728 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 22/57 (38%) Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 A++ + E + ++ ++ C T NC CP G I ++ L+ Sbjct: 366 AWQPAAQGKAATDLELIGDVMTEEEIWACTTCRNCEDQCPVGNEHVDKIVDLRRHLV 422 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L ++ Sbjct: 274 FYACVECGRCTSVCPAASTGKTLSPMHLITKLRDHLTEKG 313 >gi|116754941|ref|YP_844059.1| hypothetical protein Mthe_1652 [Methanosaeta thermophila PT] gi|116666392|gb|ABK15419.1| protein of unknown function DUF224, cysteine-rich region domain protein [Methanosaeta thermophila PT] Length = 355 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 8/99 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +D + CV C C CPS+ + ++D D Sbjct: 1 MVDVDQIRRCVRCGACRAVCPSFEVLGWESFNTRGRMILIGKILDDSDGSWAL------- 53 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C T C+Q CP G+ P+K + + +L R I Sbjct: 54 -ESLGTCTTCALCSQMCPAGVTPSKVVEDARRVLASRNI 91 >gi|124028310|ref|YP_001013630.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] gi|123979004|gb|ABM81285.1| predicted Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] Length = 100 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 7/94 (7%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C C C +CP+ S R GP + R L + + E E + LY Sbjct: 10 EAGRCAYCGFCEQACPTLPLGSHRGYGPRGRVLLARLLAEDKIEPTRELVA------SLY 63 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP G++ + ++ ML K+ Sbjct: 64 TCTLCGACLIYCPAGIDVVNVV-RLARMLAAEKL 96 >gi|299537947|ref|ZP_07051233.1| hypothetical protein BFZC1_18105 [Lysinibacillus fusiformis ZC1] gi|298726529|gb|EFI67118.1| hypothetical protein BFZC1_18105 [Lysinibacillus fusiformis ZC1] Length = 739 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 45/179 (25%), Gaps = 36/179 (20%) Query: 110 AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 + V PL D ++ ++E ++++ LY Sbjct: 226 HLIVSPLNVYMNRLDRAGTLTPID--FEALENAESEEDMPSIGVGRIQDFTQKQMLDLYS 283 Query: 170 CVMCACCSTSCPSY-------------------------------WWNSDRYLGPAILLQ 198 CV C C+ CP+ W + Sbjct: 284 CVECGRCTNMCPATGTGKMLSPMDLIVKLRDHLTFTGAVVTKQKPWVPYQFFANTKGNQL 343 Query: 199 AYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 A + D + + ++ ++ C T NC CP I ++ L Sbjct: 344 AMAAGAEGAVIEDIYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYL 402 >gi|108805618|ref|YP_645555.1| hypothetical protein Rxyl_2831 [Rubrobacter xylanophilus DSM 9941] gi|108766861|gb|ABG05743.1| protein of unknown function DUF224, cysteine-rich region [Rubrobacter xylanophilus DSM 9941] Length = 474 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF--RL 224 + +CV C C +CP+Y + P + +G + + D Sbjct: 55 IDDCVHCGFCLPTCPTYVLFGEEMDSPRGRIYLM---------NKGLAEEPMNDQMVRHF 105 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C M C +CP G+ K I + + R Sbjct: 106 DLCLGCMACVTACPSGVQYDKLIEATRAQVERR 138 >gi|323138815|ref|ZP_08073879.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylocystis sp. ATCC 49242] gi|322395963|gb|EFX98500.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylocystis sp. ATCC 49242] Length = 429 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + Q L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTHFSLSALADPDMAQSEKILRACVHCGFCTATCPTYLLTGDELDSPRGRIYLIKEMLE- 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ER + + RC + ++C +CP ++ + + + Sbjct: 61 -----HERPADARTARHIDRCLSCLSCMTTCPSSVHYMHLVDHARAHIEK 105 >gi|258511560|ref|YP_003184994.1| hypothetical protein Aaci_1593 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478286|gb|ACV58605.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 722 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 56/212 (26%), Gaps = 74/212 (34%) Query: 118 HMSVIKDLVVDM---SHFYSQHRSIEPWLKTVSPKPAKELLQSHED-------------- 160 H+ V+ +V + HF+ I WL L ++ Sbjct: 203 HLIVLLTFLVYVPQSKHFHLMVAPINIWLHRKGAPGRLRPLNLEDENAESFGVGKVEDFE 262 Query: 161 RQKIDGLYECVMCACCSTSCPS-----------------------------YWWNSDRYL 191 R+++ + CV C C+ SCP+ +L Sbjct: 263 RKQMIDFFACVECGRCTNSCPASNTGKPLSPMHLIVKMRDHLIEKGMAQTGLKAFEPSFL 322 Query: 192 GPAILLQAYRWLIDSRD-------------------------EFQGERLDNLED---PFR 223 P A++ + D E L + D Sbjct: 323 LPKREGMAHKMVSGGEDVSFPEGVVTDIEPTFHWQQEEWRLTEADPTELSLIGDVITEEE 382 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP G I ++ L+ Sbjct: 383 IWACTTCRNCEDQCPVGNEHVDKIIDLRRYLV 414 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRKI 259 ER ++ + C CT SCP K L+P I K++ L+++ + Sbjct: 262 ERKQMID----FFACVECGRCTNSCPASNTGKPLSPMHLIVKMRDHLIEKGM 309 >gi|296269119|ref|YP_003651751.1| hypothetical protein Tbis_1136 [Thermobispora bispora DSM 43833] gi|296091906|gb|ADG87858.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobispora bispora DSM 43833] Length = 416 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + +CV C C +CP+Y ++ P + ++ L D Sbjct: 1 MDPRLIRDCVHCGFCLPTCPTYVLWAEEMDSPRGRIHLMGQYLEGTP---------LTDE 51 Query: 222 F--RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ + I + + +++R Sbjct: 52 MAGHFDACLGCLACVTACPSGVRYDRLIERTR-AVVER 88 >gi|148241247|ref|YP_001226404.1| glycolate oxidase iron-sulfur subunit [Synechococcus sp. RCC307] gi|147849557|emb|CAK27051.1| Glycolate oxidase iron-sulfur subunit [Synechococcus sp. RCC307] Length = 454 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 6/95 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV C C +C SY P + + + E P Sbjct: 37 PASDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIAAGELELDAAV------PPHF 90 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP G+ + I +++ L ++ Sbjct: 91 DSCLGCFACVSACPAGVRYDQLIEQVRPQLNKAEL 125 >gi|218291011|ref|ZP_03495052.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239029|gb|EED06234.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 442 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 6/99 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + CV C C CP+Y D P + + + +D Sbjct: 19 DAPEEEKYSVCVHCGFCLEVCPTYQAWGDENHSPRGRVYLIKACAEGELPLDESVIDP-- 76 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C C +CP G+ + + + + + Sbjct: 77 ----VFTCLDCRACETACPSGVQVGALVEEARGQVFYAR 111 >gi|149197970|ref|ZP_01875018.1| glycolate oxidase iron-sulfur subunit [Lentisphaera araneosa HTCC2155] gi|149138882|gb|EDM27287.1| glycolate oxidase iron-sulfur subunit [Lentisphaera araneosa HTCC2155] Length = 397 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C SCP+Y + P L +R + R Q E++++ C Sbjct: 20 NCIHCGLCLDSCPTYKLTGNENNSPRGRLAMWRAEDEGR-TQQAEKINHYTSE-----CL 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CP + + + + ++ +++ Sbjct: 74 GCLACETACPANVPYGEILMEQRIKQVEQG 103 >gi|328765984|gb|EGF76065.1| hypothetical protein BATDEDRAFT_93075 [Batrachochytrium dendrobatidis JAM81] Length = 865 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D D +CV C C +CP+Y + P + + + + + + Sbjct: 442 DLPDPDKWADCVHCGMCLEACPTYQETGEEQHSPRGRVYLIKAVAEGKIDINEAFSKP-- 499 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C C +CP + I + + + Sbjct: 500 ----VFDCLDCRACETACPADVQVGGLIEEARGQI 530 >gi|172056314|ref|YP_001812774.1| hypothetical protein Exig_0271 [Exiguobacterium sibiricum 255-15] gi|171988835|gb|ACB59757.1| protein of unknown function DUF224 cysteine-rich region domain protein [Exiguobacterium sibiricum 255-15] Length = 710 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 32/121 (26%), Gaps = 31/121 (25%) Query: 166 GLYECVMCACCSTSCPSY-------------------------------WWNSDRYLGPA 194 LY CV C C+ CP+ W + + G Sbjct: 282 DLYACVECGRCTNMCPASGTGKMLSPMDLIVKLRDHLNMKTAAITQKSPWAPAFAFEGSQ 341 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 A D + N+ ++ C T NC CP I ++ L Sbjct: 342 GNQIASLAAAGQMDVVPDSLIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRHL 401 Query: 255 L 255 + Sbjct: 402 V 402 >gi|292654395|ref|YP_003534292.1| iron-sulfur protein [Haloferax volcanii DS2] gi|291370547|gb|ADE02774.1| iron-sulfur protein (4Fe-4S) [Haloferax volcanii DS2] Length = 704 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 10/120 (8%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILL---QA 199 P + S +D L C C C+ +CP+ + L P ++ +A Sbjct: 275 PADTPPDEIGYVSEDDFSWKAMLDMDACTKCGRCTDACPAKASGRN--LDPRDVILDLKA 332 Query: 200 YRWLIDSRDEFQGERLD---NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 YR +D+ + D ++ D + C M C +CP + ++ L + Sbjct: 333 YRESVDAGGDSIDIVADGGTSVVDAESMESCMACMACMDACPVDIEHLTHFTEMNRRLTE 392 >gi|317050318|ref|YP_004111434.1| hypothetical protein Selin_0119 [Desulfurispirillum indicum S5] gi|316945402|gb|ADU64878.1| protein of unknown function DUF162 [Desulfurispirillum indicum S5] Length = 704 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 17/144 (11%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + LP + + + ++ Q + K + +++ Q ++ C+ Sbjct: 249 IRMLPKSATGQTISTYVTWIQGQEVTPAGEAKQMHYVFLDNGRLKYKNDQDVNQALGCIR 308 Query: 173 CACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C+ CP Y D Y+G L+ + D L L C Sbjct: 309 CGSCANVCPVYELLGGHVFGDVYIGAIGLIYTSMF----GDAKLANALQKL--------C 356 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 + M C+ +CP G++ IA ++ Sbjct: 357 SSCMACSANCPAGIDLHAIIAHLR 380 >gi|291280209|ref|YP_003497044.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] gi|290754911|dbj|BAI81288.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] Length = 662 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 43/141 (30%), Gaps = 6/141 (4%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCA 174 + + + + Q SI+ + + + +E + I C C Sbjct: 238 IKFRHIFTTSANYFFNDFRQKGSIDTIDLENEEAESFGVSKVNEFTWKDIFDSDACTKCK 297 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C CP+Y P ++ + ++ + ++ C T C Sbjct: 298 RCQDRCPAYNTGK-----PLSPMKLILDIGEAAVNGAETNVIEKISTDVIWSCTTCRACQ 352 Query: 235 QSCPKGLNPAKAIAKIKMMLL 255 + CP I +++ L+ Sbjct: 353 EICPANNEHVNKIIEMRRNLV 373 >gi|212640558|ref|YP_002317078.1| Fe-S oxidoreductase [Anoxybacillus flavithermus WK1] gi|212562038|gb|ACJ35093.1| Fe-S oxidoreductase [Anoxybacillus flavithermus WK1] Length = 692 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 37/150 (24%), Gaps = 34/150 (22%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD----------- 188 + + + + + ++ LY CV C C+ CP+ Sbjct: 243 KINFEDETQESFGVGKIEDFKQTQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLR 302 Query: 189 ------------------RYLGPAILLQAYRWLIDSRDEFQG-----ERLDNLEDPFRLY 225 + ++ E + ++ ++ Sbjct: 303 DHLTEKGAAITSKAPWVPTFAFANTKGNQLAFMAQGMQEQAATIEMPNLIGDVITEEEIW 362 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C T NC CP I ++ L+ Sbjct: 363 ACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 392 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 270 LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTEKG 309 >gi|297627013|ref|YP_003688776.1| iron-sulfur protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922778|emb|CBL57356.1| iron-sulfur protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 512 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 19/96 (19%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAIL--LQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP + R L D D Sbjct: 340 RCIRCASCINVCPVYERAGGHAYGSVYPGPIGISLTPQLRGLDDPVDRGMP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C++ CP ++ I ++ + Sbjct: 391 ---YACSLCNACSEVCPVKISFVDVIIHLRNQVAQA 423 >gi|111225969|ref|YP_716763.1| hypothetical protein FRAAL6636 [Frankia alni ACN14a] gi|111153501|emb|CAJ65259.1| conserved hypothetical protein; putative membrane protein [Frankia alni ACN14a] Length = 733 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 53/146 (36%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLIDSRDEFQG 212 + + C C C + CP+ WN+ + L P +L+ R +L+ ++ E +G Sbjct: 278 WKAMLDFATCTECGRCQSQCPA--WNTGKPLSPKLLIMDLRDHLFAKAPYLLSTKGEAEG 335 Query: 213 E-------------------------RLDN------------------LEDPFRLYRCHT 229 E R+ + DP L+ C Sbjct: 336 EEAPKAVTGVEEDAHAHHGVPESGFGRVPEPGQPQVDRPLVGTAEEGGVIDPDVLWSCTN 395 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 396 CGACVEQCPVDIEHVDHIVDMRRYQV 421 >gi|309812995|ref|ZP_07706723.1| cysteine-rich domain protein [Dermacoccus sp. Ellin185] gi|308433067|gb|EFP56971.1| cysteine-rich domain protein [Dermacoccus sp. Ellin185] Length = 781 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 16/45 (35%) Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ + D L+ C T C + CP + I ++ Sbjct: 404 TANGDAAGAIIDEDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRY 448 >gi|312115937|ref|YP_004013533.1| hypothetical protein Rvan_3239 [Rhodomicrobium vannielii ATCC 17100] gi|311221066|gb|ADP72434.1| protein of unknown function DUF224 cysteine-rich region domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 452 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 7/77 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C +CP+Y D P + + +++ + + R + R Sbjct: 22 LRKCVHCGFCIATCPTYLMLGDERDSPRGRIYLIKTMLEGKATPKQIR-------PHIDR 74 Query: 227 CHTIMNCTQSCPKGLNP 243 C + +C +CP G++ Sbjct: 75 CLSCYSCMTTCPSGVDY 91 >gi|193211775|ref|YP_001997728.1| hypothetical protein Cpar_0100 [Chlorobaculum parvum NCIB 8327] gi|193085252|gb|ACF10528.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chlorobaculum parvum NCIB 8327] Length = 662 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C CP++ P ++ + + G+ L Sbjct: 283 WKDLFDTDACMQCGRCQQRCPAHLTGK-----PLSPMKVITDIGELAGNENGKGLVEKVS 337 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C Q CP + I +++ L Sbjct: 338 RDALWSCTTCRACEQICPASIEHIGKIIEMRRSLA 372 >gi|295697792|ref|YP_003591030.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] gi|295413394|gb|ADG07886.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] Length = 673 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 26/112 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEF-QGERL---------- 215 Y C C C +CP+ S + L P L+ R L+ D +R+ Sbjct: 272 YACTECGRCHVNCPA--TLSGKPLSPKYLILKMRDHLVQVGDTLLAQQRMAAAGAGAGDA 329 Query: 216 ------------DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ ++ C T C ++CP I ++ L+ Sbjct: 330 GAAVATEIPSLIGDVYTEDEIWACTTCRACEEACPVFNEHVDKIIDLRRYLV 381 >gi|297559657|ref|YP_003678631.1| hypothetical protein Ndas_0680 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844105|gb|ADH66125.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 440 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 7/98 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 DR D L +CV C C +CP++ P + + D + + Sbjct: 11 DRLFSDLLNDCVHCGFCLPTCPTHVLWGQEMDSPRGRIHLMAQ-THTEDVLTETAVGH-- 67 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + C +CP G+ I + + Sbjct: 68 ----FDNCLGCLACVSACPSGVAYDALIDTTRHRVERE 101 >gi|33864699|ref|NP_896258.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. WH 8102] gi|33632222|emb|CAE06678.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. WH 8102] Length = 452 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 CV C C +C SY + P + A R + E LD Sbjct: 15 ADPCVHCGFCLPTCASYRVLASEMDSPRGRIHALRAI-----EAGELELDATVASH-FDT 68 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ + I + Sbjct: 69 CLGCYACVSACPSGVRYDQLIEATR 93 >gi|18312529|ref|NP_559196.1| hypothetical protein PAE1289 [Pyrobaculum aerophilum str. IM2] gi|18159993|gb|AAL63378.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 379 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 51/185 (27%), Gaps = 19/185 (10%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIA-----VYPLPHMSVIKDLVVDMSHFYSQH 136 + + DG + + + +YP +M++ ++ Sbjct: 206 TTVIPPVHVVYDGVEKIVPTLIHAQLVADLQSAYAGLYPPTYMNISAGPSSTADIEMTRV 265 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP--- 193 + + + D + C+ C C CP Y + P Sbjct: 266 SPAQGPREYHMILVDNGRRNAARD-PVLWEALLCIRCGRCHLHCPVYLAVGKEFGKPPYT 324 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + + +E L C +C CP ++ + I +I+ Sbjct: 325 GPMGVMWTAITRGVEEAGRHALK----------CVHAGSCKSVCPMNIDIPRIIHEIRAR 374 Query: 254 LLDRK 258 L +K Sbjct: 375 FLRKK 379 >gi|323530114|ref|YP_004232266.1| hypothetical protein BC1001_5841 [Burkholderia sp. CCGE1001] gi|323387116|gb|ADX59206.1| Protein of unknown function DUF3483 [Burkholderia sp. CCGE1001] Length = 637 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 ++ CV C C +CP++ + L P L+Q + + Sbjct: 241 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAEYAGSPTPGI 298 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 Q + +L + L+ C T C Q CP + AI ++ Sbjct: 299 PVGKHGGAPQKPLISSLIEAETLWSCTTCRACVQECPMLIEHVDAIVDMRR 349 >gi|170695646|ref|ZP_02886789.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia graminis C4D1M] gi|170139445|gb|EDT07630.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia graminis C4D1M] Length = 623 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 ++ CV C C +CP++ + L P L+Q + + Sbjct: 227 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAEYAGSPTPGI 284 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 Q + +L + L+ C T C Q CP + AI ++ Sbjct: 285 PVGKHGGAPQKPLISSLIEAETLWSCTTCRACVQECPMLIEHVDAIVDMRR 335 >gi|126657367|ref|ZP_01728526.1| hypothetical protein CY0110_00370 [Cyanothece sp. CCY0110] gi|126621354|gb|EAZ92066.1| hypothetical protein CY0110_00370 [Cyanothece sp. CCY0110] Length = 455 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ K + + CV C C ++CPSY P + +L+D+ + Q + L Sbjct: 24 FDSKNPPKQELIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRI----YLMDAIKKGQAD-L 78 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C + C +CP G+ IA + Sbjct: 79 DETTTQH-FDSCLGCLACVSTCPSGVQYDSLIAATR 113 >gi|146276266|ref|YP_001166425.1| hypothetical protein Rsph17025_0210 [Rhodobacter sphaeroides ATCC 17025] gi|145554507|gb|ABP69120.1| protein of unknown function DUF224, cysteine-rich region domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 433 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ + + L CV C C+ +CP+Y D P + + ++++ Sbjct: 2 QTNFTDEQLKDPGVARANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLEA 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + +++ RC + C +CP G++ + + Sbjct: 62 GRPADEKTVKHID------RCLGCLACMTTCPSGVHYMHLVDHAR 100 >gi|315105058|gb|EFT77034.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL050PA2] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ +++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVE 422 >gi|307727869|ref|YP_003911082.1| hypothetical protein BC1003_5880 [Burkholderia sp. CCGE1003] gi|307588394|gb|ADN61791.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1003] Length = 637 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI---------------- 204 ++ CV C C +CP++ + L P L+Q + Sbjct: 241 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAQYAGSPTPGI 298 Query: 205 ---DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 Q + +L + L+ C T C Q CP + AI ++ Sbjct: 299 PVGQHAGAPQKPLISSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 349 >gi|313124855|ref|YP_004035119.1| fe-s oxidoreductase [Halogeometricum borinquense DSM 11551] gi|312291220|gb|ADQ65680.1| Fe-S oxidoreductase [Halogeometricum borinquense DSM 11551] Length = 705 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 9/145 (6%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 +I ++ + + + SP ++I C C CS+ Sbjct: 250 FHMISSFANVVTADEKAGKRLPGVPEDESPDEIGYTSIEDLSWKQILDTDACTKCGRCSS 309 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-------EDPFRLYRCHTIM 231 CP+ S R L P ++ + + D + E +D + D + C M Sbjct: 310 VCPAKE--SGRPLDPRDVILDLKQYREDLDAGRTEEIDIVADGGTSVIDSSTMESCMACM 367 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLD 256 C +CP + ++ L + Sbjct: 368 ACMDACPVDIEHLSHFTEMNRRLTE 392 >gi|149907850|ref|ZP_01896518.1| oxidoreductase/iron-sulfur cluster-binding protein [Moritella sp. PE36] gi|149808856|gb|EDM68787.1| oxidoreductase/iron-sulfur cluster-binding protein [Moritella sp. PE36] Length = 950 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 13/135 (9%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ ++ + + + P + K + + +C+ C C CPS Sbjct: 506 LMQEIKRIFDKTGILNPGVILNDNKNSHITDLKIMPAA-DPLIDKCIECGFCEPVCPSRE 564 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPF---RLYRCHTIMNCTQSCP 238 + L P YR + SR + E RL LE F + C C + CP Sbjct: 565 LS----LTPRQRNTVYREI--SRLQRSQEDPARLAELEKSFKYLGIDTCAATGLCAERCP 618 Query: 239 KGLNPAKAIAKIKMM 253 +N I K++ Sbjct: 619 VDINTGDLIRKLRQQ 633 >gi|314922507|gb|EFS86338.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL001PA1] gi|314965582|gb|EFT09681.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL082PA2] gi|315094334|gb|EFT66310.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL060PA1] gi|327329126|gb|EGE70886.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL103PA1] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ +++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVE 422 >gi|67921007|ref|ZP_00514526.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 [Crocosphaera watsonii WH 8501] gi|67857124|gb|EAM52364.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 [Crocosphaera watsonii WH 8501] Length = 455 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ K + + CV C C ++CPSY P + +L+D+ ++ + LD Sbjct: 27 KNPPKQELIDSCVHCGFCLSTCPSYRVIGKEMDSPRGRI----YLMDAINKGKAT-LDEA 81 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ I+ + Sbjct: 82 TTQH-FDSCLGCLACVSTCPSGVQYDSLISATR 113 >gi|119872841|ref|YP_930848.1| hypothetical protein Pisl_1342 [Pyrobaculum islandicum DSM 4184] gi|119674249|gb|ABL88505.1| protein of unknown function DUF162 [Pyrobaculum islandicum DSM 4184] Length = 380 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 17/98 (17%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C CP Y + Y GP ++ + +E L Sbjct: 293 WEALLCIRCGRCHFHCPIYRVLDGKFGVPPYTGPMGVMWTA--ITRGIEEAGPHALK--- 347 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP ++ K I +IKM L + Sbjct: 348 -------CAHAGNCKEVCPMEIDIPKIIQEIKMRYLKK 378 >gi|113475709|ref|YP_721770.1| hypothetical protein Tery_2056 [Trichodesmium erythraeum IMS101] gi|110166757|gb|ABG51297.1| protein of unknown function DUF224, cysteine-rich region [Trichodesmium erythraeum IMS101] Length = 471 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 7/90 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C ++CPSY P + + + E N C Sbjct: 51 CVHCGFCLSTCPSYRVIGKEMDSPRGRIYVMDAINNG------EASLNQTSSQHFDTCLG 104 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C +CP G+ K IA + ++R I Sbjct: 105 CLACVTTCPSGVRYDKLIAATRPQ-VERNI 133 >gi|282853217|ref|ZP_06262554.1| iron-sulfur cluster-binding protein [Propionibacterium acnes J139] gi|282582670|gb|EFB88050.1| iron-sulfur cluster-binding protein [Propionibacterium acnes J139] gi|314982746|gb|EFT26838.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL110PA3] gi|315091399|gb|EFT63375.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL110PA4] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ +++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVE 422 >gi|194016458|ref|ZP_03055072.1| YwjF [Bacillus pumilus ATCC 7061] gi|194011931|gb|EDW21499.1| YwjF [Bacillus pumilus ATCC 7061] Length = 703 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------------------ 201 LY CV C C+ CP+ + + L P L+ R Sbjct: 273 DLYACVECGRCTNMCPA--TGTGKMLSPMDLILRLRDHLTNKGAAITSKTPWVPQLAFRQ 330 Query: 202 -----WLIDSRDEFQGER----------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + +R E + + ++ C T NC CP Sbjct: 331 TTGNQLALQARGAGAEESAASSMYHPSLIGEVITEEEIWACTTCRNCEDQCPVMNEHVDK 390 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 391 IIDMRRYLV 399 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTNKG 313 >gi|157694124|ref|YP_001488586.1| Fe-S dehydrogenase [Bacillus pumilus SAFR-032] gi|157682882|gb|ABV64026.1| Fe-S dehydrogenase [Bacillus pumilus SAFR-032] Length = 703 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------------------ 201 LY CV C C+ CP+ + + L P L+ R Sbjct: 273 DLYACVECGRCTNMCPA--TGTGKMLSPMDLILRLRDHLTNKGAAITSKTPWVPQLAFRQ 330 Query: 202 -----WLIDSRDEFQGER----------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + +R E + + ++ C T NC CP Sbjct: 331 TTGNQLALQARGAGAEESAASSMYHPSLIGEVITEEEIWACTTCRNCEDQCPVMNEHVDK 390 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 391 IIDMRRYLV 399 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTNKG 313 >gi|222053357|ref|YP_002535719.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221562646|gb|ACM18618.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 662 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP++ D+ L P ++ + + E L Sbjct: 284 WKDIFDTDACTKCKRCQDRCPAHNT--DKPLSPMKVINQLGEVACTNPEAN---LIETVS 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + + ++ ++ Sbjct: 339 KDALWSCTTCRACQEICPAAIEHVGKVVDMRRNMV 373 >gi|307729206|ref|YP_003906430.1| hypothetical protein BC1003_1161 [Burkholderia sp. CCGE1003] gi|307583741|gb|ADN57139.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1003] Length = 471 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D+ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDKA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|323526621|ref|YP_004228774.1| hypothetical protein BC1001_2297 [Burkholderia sp. CCGE1001] gi|323383623|gb|ADX55714.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1001] Length = 471 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D+ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDKA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|170694732|ref|ZP_02885883.1| protein of unknown function DUF162 [Burkholderia graminis C4D1M] gi|170140363|gb|EDT08540.1| protein of unknown function DUF162 [Burkholderia graminis C4D1M] Length = 471 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D+ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDKA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|114707350|ref|ZP_01440247.1| hypothetical protein FP2506_03990 [Fulvimarina pelagi HTCC2506] gi|114537231|gb|EAU40358.1| hypothetical protein FP2506_03990 [Fulvimarina pelagi HTCC2506] Length = 650 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 19/112 (16%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNS------------DRYLGPAILLQAYRWLIDSR 207 ++ CV C C +CP++ G A ++R Sbjct: 235 AWNRLLSFDACVQCGRCEAACPAFAAGQPLSPKHLIADLAAAGGGGYGSPYAGNPYPNAR 294 Query: 208 DEFQGERLDN-------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L + + P ++ C T C + CP + +I ++ Sbjct: 295 PTGSEIGLHHAVIGDGGIVHPDTIWSCTTCRACVEECPMMIEHVDSIIDLRR 346 >gi|314928224|gb|EFS92055.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL044PA1] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ +++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVE 422 >gi|313835273|gb|EFS72987.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL037PA2] gi|314970053|gb|EFT14151.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL037PA3] gi|328905964|gb|EGG25740.1| iron-sulfur cluster-binding protein [Propionibacterium sp. P08] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ +++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVE 422 >gi|300855458|ref|YP_003780442.1| hypothetical protein CLJU_c22820 [Clostridium ljungdahlii DSM 13528] gi|300435573|gb|ADK15340.1| hypothetical protein CLJU_c22820 [Clostridium ljungdahlii DSM 13528] Length = 108 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCG-PMVLDGLLYIKNKIDPTLTL--RRSCREGIC 85 + ++YR+ P + D + V + V++ L YI+ D +L+ +C GIC Sbjct: 2 KVKVYRFEPTVEEGEHYDCFDVPVIFEEKWTVMNVLDYIQEHCDSSLSYYKHSACGHGIC 61 Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV 127 G C + +DGT +LAC + + I + PL +KDLV Sbjct: 62 GRCTLMVDGTPSLAC-THVIEKGDEIVLEPLKGRKKVKDLVT 102 >gi|322418742|ref|YP_004197965.1| hypothetical protein GM18_1216 [Geobacter sp. M18] gi|320125129|gb|ADW12689.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 658 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 14/153 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP+ + L + F+ + + + + S + D C C Sbjct: 217 LPYSKHMHILAAIPNCFFKELETPNTQPREEFVEGNVFGAGSIDRFTWKDLFDSFSCTEC 276 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRD--EFQGERLDNLEDPFR------ 223 C +CP+ N+ + L P +++ + L + + + D Sbjct: 277 GRCEKACPA--ANTGKPLNPRLVMHDIKVNLLANGGVVQRGGEPTVPVIGDGEGCIKPDA 334 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ C + C +CP + I K++ L+ Sbjct: 335 LWSCTSCGACLSACPVFIEQMPKITKMRRHLVQ 367 >gi|328758579|gb|EGF72195.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL025PA2] Length = 513 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ ++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVK 422 >gi|332969639|gb|EGK08655.1| glycolate oxidase iron-sulfur subunit [Desmospora sp. 8437] Length = 210 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 7/100 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +CV C C +CP+Y + P + + + + + E + +D Sbjct: 24 DVPDETKWADCVHCGLCLEACPTYLETGYEHQSPRGRVHLIQAVAEGKVELNAQFMDP-- 81 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C C +CP + I + + + R + Sbjct: 82 ----VFTCLDCRACETACPANVQVGGLIEEARGQ-VRRAL 116 >gi|227494453|ref|ZP_03924769.1| Fe-S dehydrogenase [Actinomyces coleocanis DSM 15436] gi|226832187|gb|EEH64570.1| Fe-S dehydrogenase [Actinomyces coleocanis DSM 15436] Length = 786 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 35/137 (25%), Gaps = 44/137 (32%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------------- 201 + C C C CP+ WN+ + L P +L+ + R Sbjct: 344 WKARLDFSTCTECGRCQELCPA--WNTGKPLSPKLLVLSLRDHVAAVEVTKALPSPEGNE 401 Query: 202 ------WLIDSRDEFQGER-----------------LDNLEDPFRLYRCHTIMNCTQSCP 238 S D R + + L+ C T C CP Sbjct: 402 VDPNWPQSAHSVDVLAALRASGNTGDSGVSLVSASLVGEVVSEDALWDCTTCGACVDQCP 461 Query: 239 KGLNPAKAIAKIKMMLL 255 + I ++ + Sbjct: 462 VDIEHVDHIINLRRHQV 478 >gi|124485066|ref|YP_001029682.1| hypothetical protein Mlab_0239 [Methanocorpusculum labreanum Z] gi|124362607|gb|ABN06415.1| Heterodisulfide reductase subunit C-like protein [Methanocorpusculum labreanum Z] Length = 194 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 13/94 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C C C+ SCPS G + ++ R G R L DP L+ Sbjct: 42 EAHICYQCGTCTGSCPS---------GARSTYRIRNFM---RRVNLGMRDVCLNDPD-LW 88 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C+ CP+ L P I ++ + + I Sbjct: 89 LCTTCYTCSDRCPRNLIPTDVIMAMRNIAARQGI 122 >gi|313764830|gb|EFS36194.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL013PA1] gi|313815607|gb|EFS53321.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL059PA1] gi|313828948|gb|EFS66662.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL063PA2] gi|314916404|gb|EFS80235.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL005PA4] gi|314917245|gb|EFS81076.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL050PA1] gi|314921620|gb|EFS85451.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL050PA3] gi|314930733|gb|EFS94564.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL067PA1] gi|314955149|gb|EFS99554.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL027PA1] gi|314959344|gb|EFT03446.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL002PA1] gi|314969201|gb|EFT13299.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL037PA1] gi|315099583|gb|EFT71559.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL059PA2] gi|315102186|gb|EFT74162.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL046PA1] gi|315109941|gb|EFT81917.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL030PA2] gi|327334741|gb|EGE76452.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL097PA1] gi|327454438|gb|EGF01093.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL087PA3] gi|327456503|gb|EGF03158.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL083PA2] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ ++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVK 422 >gi|295699483|ref|YP_003607376.1| hypothetical protein BC1002_3853 [Burkholderia sp. CCGE1002] gi|295438696|gb|ADG17865.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. CCGE1002] Length = 641 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ CV C C +CP++ + L P L+Q + + Q Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAQYAGSPTPGI 302 Query: 212 ----------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + L+ C T C Q CP + AI ++ Sbjct: 303 PVGKHAGAPGKPLISTLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|322381519|ref|ZP_08055498.1| iron-sulfur-binding reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154526|gb|EFX46823.1| iron-sulfur-binding reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 734 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%) Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + Q + W + ++ E L ++ ++ C T NC CP G I + Sbjct: 364 IAHTMNTQKHSWTVSDKNAEDVELLGDVMTDDEIWSCTTCRNCEDQCPVGNEHVDKIIDL 423 Query: 251 KMMLL 255 + L+ Sbjct: 424 RRHLV 428 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L+D+ Sbjct: 282 FYSCVECGRCTNVCPASNTGKLLSPMHLIVKLRDHLIDKG 321 >gi|328756199|gb|EGF69815.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL087PA1] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ ++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVK 422 >gi|294789751|ref|ZP_06754982.1| iron-sulfur cluster-binding protein [Simonsiella muelleri ATCC 29453] gi|294482317|gb|EFG30013.1| iron-sulfur cluster-binding protein [Simonsiella muelleri ATCC 29453] Length = 480 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 58/213 (27%), Gaps = 34/213 (15%) Query: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGT------NTLACVKDMKDIKGAI 111 M L + + + + +C +G + ++ + + Sbjct: 193 MALRDIYRTADVGLSGVNFAVAETGTLCLVEN-EGNGRLTTSVPPVHIAITGIEKVVAKL 251 Query: 112 A-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKID 165 V PL + +++ +++ + P+ +++ Sbjct: 252 TDVVPLYSQLPRTAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRTQAYVEEQMR 311 Query: 166 GLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNL 218 +C+ C C CP Y Y GP + L +RD Sbjct: 312 QTLQCIRCGACMNHCPVYSRVGGAAYGTTYPGPIGEILSPHLLGLDKTRDLPTA------ 365 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 366 --------CSMCGACVEVCPVKIPITEQMQRLR 390 >gi|288918772|ref|ZP_06413118.1| protein of unknown function DUF224 cysteine-rich region domain protein [Frankia sp. EUN1f] gi|288349857|gb|EFC84088.1| protein of unknown function DUF224 cysteine-rich region domain protein [Frankia sp. EUN1f] Length = 737 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R E + DP L+ C C + CP + I ++ + Sbjct: 376 RPLVGTEEEGGVIDPDVLWSCTNCGACVEQCPVDIEHVDHIVDMRRYQV 424 >gi|119872847|ref|YP_930854.1| hypothetical protein Pisl_1348 [Pyrobaculum islandicum DSM 4184] gi|119674255|gb|ABL88511.1| protein of unknown function DUF162 [Pyrobaculum islandicum DSM 4184] Length = 386 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 52/177 (29%), Gaps = 19/177 (10%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIA-----VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 + DG + + + +YP +++ + + + Sbjct: 213 HIVYDGVEKILPTMIHAFMAINVQAAYAGLYPPTFVNITAGPSSTADIEFYRVSPAQGPR 272 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAY 200 + ++ D + C+ C C CP Y ++ P + + Sbjct: 273 EFHVVLVDNGRRRAARD-PVLWEALLCIRCGRCHFHCPIYRVLDGKFGVPPYTGPMGVMW 331 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + +E L C NC + CP ++ K I +IKM + + Sbjct: 332 TAITRGIEEAGPHALK----------CAHAGNCKEVCPMEIDIPKIIQEIKMRYMKQ 378 >gi|86743025|ref|YP_483425.1| hypothetical protein Francci3_4350 [Frankia sp. CcI3] gi|86569887|gb|ABD13696.1| protein of unknown function DUF224, cysteine-rich region [Frankia sp. CcI3] Length = 743 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R E + DP L+ C C + CP + I ++ + Sbjct: 380 RPLVGTEEEGGVIDPDVLWSCTNCGACVEQCPVDIEHVDHIVDMRRYQV 428 >gi|120401635|ref|YP_951464.1| hypothetical protein Mvan_0619 [Mycobacterium vanbaalenii PYR-1] gi|119954453|gb|ABM11458.1| protein of unknown function DUF224, cysteine-rich region domain protein [Mycobacterium vanbaalenii PYR-1] Length = 1027 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C T C + CP + I ++ + Sbjct: 400 VIDPDVLWSCTTCGACVEQCPVDIEHIDHIVDMRRYQV 437 >gi|126459160|ref|YP_001055438.1| hypothetical protein Pcal_0545 [Pyrobaculum calidifontis JCM 11548] gi|126248881|gb|ABO07972.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum calidifontis JCM 11548] Length = 588 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 7/145 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V P ++ V D + + + + D+ + C Sbjct: 166 VKPAANLMVNYDRELSHFRIPFRLEDVIEGKIKPEEVKFGYEKIADVDKDVVLSCQSCGE 225 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C CP+ R L P ++++ E ++ + + C T Sbjct: 226 IGACDAGCPAVAA--GRLLSPRVVVRTVALN-----SNNPEFELAVKLEQQAWACTTCGY 278 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDR 257 C +CP +N I ++ L+ + Sbjct: 279 CVYACPVRVNHLDVIFGVRRALVAQ 303 >gi|288957340|ref|YP_003447681.1| glycolate oxidase iron-sulfur subunit [Azospirillum sp. B510] gi|288909648|dbj|BAI71137.1| glycolate oxidase iron-sulfur subunit [Azospirillum sp. B510] Length = 441 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R L +CV C C+ +CP+Y D P + + +++ + +++ Sbjct: 16 RDSERILRKCVHCGFCTATCPTYTILGDELDSPRGRIYQIKDMLEKGGPPPETTVKHID- 74 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC + ++C +CP G++ + + + Sbjct: 75 -----RCLSCLSCMTTCPSGVHYMHLVDHARAHI 103 >gi|50841656|ref|YP_054883.1| putative iron-sulfur protein [Propionibacterium acnes KPA171202] gi|289424743|ref|ZP_06426526.1| iron-sulfur cluster-binding protein [Propionibacterium acnes SK187] gi|289428914|ref|ZP_06430594.1| iron-sulfur cluster-binding protein [Propionibacterium acnes J165] gi|295129733|ref|YP_003580396.1| iron-sulfur cluster-binding protein [Propionibacterium acnes SK137] gi|50839258|gb|AAT81925.1| putative iron-sulfur protein [Propionibacterium acnes KPA171202] gi|289155440|gb|EFD04122.1| iron-sulfur cluster-binding protein [Propionibacterium acnes SK187] gi|289157915|gb|EFD06138.1| iron-sulfur cluster-binding protein [Propionibacterium acnes J165] gi|291375434|gb|ADD99288.1| iron-sulfur cluster-binding protein [Propionibacterium acnes SK137] gi|313772699|gb|EFS38665.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL074PA1] gi|313792718|gb|EFS40799.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL110PA1] gi|313803382|gb|EFS44564.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL110PA2] gi|313807040|gb|EFS45538.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL087PA2] gi|313811180|gb|EFS48894.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL083PA1] gi|313817826|gb|EFS55540.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL046PA2] gi|313821349|gb|EFS59063.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL036PA1] gi|313824710|gb|EFS62424.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL036PA2] gi|313826374|gb|EFS64088.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL063PA1] gi|313832181|gb|EFS69895.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL007PA1] gi|313834327|gb|EFS72041.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL056PA1] gi|313839453|gb|EFS77167.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL086PA1] gi|314926385|gb|EFS90216.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL036PA3] gi|314961517|gb|EFT05618.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL002PA2] gi|314964091|gb|EFT08191.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL082PA1] gi|314974424|gb|EFT18519.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL053PA1] gi|314977387|gb|EFT21482.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL045PA1] gi|314980069|gb|EFT24163.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL072PA2] gi|314985420|gb|EFT29512.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL005PA1] gi|314986924|gb|EFT31016.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL005PA2] gi|314990583|gb|EFT34674.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL005PA3] gi|315078801|gb|EFT50823.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL053PA2] gi|315081723|gb|EFT53699.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL078PA1] gi|315082858|gb|EFT54834.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL027PA2] gi|315086481|gb|EFT58457.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL002PA3] gi|315088195|gb|EFT60171.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL072PA1] gi|315097255|gb|EFT69231.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL038PA1] gi|315107538|gb|EFT79514.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL030PA1] gi|327331230|gb|EGE72969.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL096PA2] gi|327333857|gb|EGE75574.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL096PA3] gi|327444675|gb|EGE91329.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL013PA2] gi|327447395|gb|EGE94049.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL043PA1] gi|327450419|gb|EGE97073.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL043PA2] gi|327457227|gb|EGF03882.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL092PA1] gi|328758180|gb|EGF71796.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL020PA1] gi|328759545|gb|EGF73151.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL099PA1] gi|332674569|gb|AEE71385.1| electron transport protein YkgF [Propionibacterium acnes 266] Length = 511 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ ++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVK 422 >gi|312194112|ref|YP_004014173.1| hypothetical protein FraEuI1c_0215 [Frankia sp. EuI1c] gi|311225448|gb|ADP78303.1| protein of unknown function DUF224 cysteine-rich region domain protein [Frankia sp. EuI1c] Length = 756 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 15/38 (39%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C C + CP + I ++ + Sbjct: 402 VIDPDVLWSCTNCGACVEQCPVDIEHVDHIVDMRRYQV 439 >gi|262196949|ref|YP_003268158.1| hypothetical protein Hoch_3765 [Haliangium ochraceum DSM 14365] gi|262080296|gb|ACY16265.1| protein of unknown function DUF224 cysteine-rich region domain protein [Haliangium ochraceum DSM 14365] Length = 712 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 46/160 (28%), Gaps = 47/160 (29%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 K + + E L Y C CA C+ +CP+Y + L P L+ Sbjct: 251 DMPKLDLEDENQWGVGRIEQFSWKSLLDNYACTECARCTNNCPAYAT--GKNLSPMQLVH 308 Query: 199 AYRWLIDSRDEFQGER------------------------------------LDNLED-- 220 R+ + RD +R L+ + + Sbjct: 309 DLRYEMIDRDALLAQRDGLDREIEAFEHKEEDGHKHPDFEHLEQQRAEVEEQLEAMPELV 368 Query: 221 -----PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + I +++ L+ Sbjct: 369 GGRIADETLWACTTCGACQAVCPVFIEHPLKILQMRQNLV 408 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 225 YRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDR 257 Y C CT +CP K L+P + + ++ ++DR Sbjct: 280 YACTECARCTNNCPAYATGKNLSPMQLVHDLRYEMIDR 317 Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 40/142 (28%), Gaps = 19/142 (13%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD-LVVDMS 130 + + C C + A K++ ++ L + + +D L+ Sbjct: 269 EQFSWKSLLDNYACTECARCTNNCPAYATGKNLSPMQLVHD---LRYEMIDRDALLAQRD 325 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHED---------------RQKIDGLYECVMCAC 175 + + E + P E L+ R + L+ C C Sbjct: 326 GLDREIEAFEHKEEDGHKHPDFEHLEQQRAEVEEQLEAMPELVGGRIADETLWACTTCGA 385 Query: 176 CSTSCPSYWWNSDRYLGPAILL 197 C CP + + + L L Sbjct: 386 CQAVCPVFIEHPLKILQMRQNL 407 >gi|158312103|ref|YP_001504611.1| hypothetical protein Franean1_0238 [Frankia sp. EAN1pec] gi|158107508|gb|ABW09705.1| protein of unknown function DUF224 cysteine-rich region domain protein [Frankia sp. EAN1pec] Length = 739 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 15/38 (39%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C C + CP + I ++ + Sbjct: 390 VIDPDVLWSCTNCGACVEQCPVDIEHVDHIVDMRRYQV 427 >gi|118590648|ref|ZP_01548049.1| glycolate oxidase iron-sulfur subunit [Stappia aggregata IAM 12614] gi|118436624|gb|EAV43264.1| glycolate oxidase iron-sulfur subunit [Stappia aggregata IAM 12614] Length = 445 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 E L+ L +CV C C+ +CP++ D P + + ++++ Sbjct: 2 QTNFTAEQLKDSHVAASEKILRKCVHCGFCTATCPTFTLLGDELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + + C +CP G++ + + + Sbjct: 62 DRPADKTIVKHID------RCLSCLACMTTCPSGVHYMHLVDHARTHIEK 105 >gi|474041|emb|CAA53465.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 51 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 32/50 (64%), Positives = 42/50 (84%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CS+SCPSYWWN+D+YLGPA+L+QAYRW+IDSRD++ ERL + D F + Sbjct: 1 CSSSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDYPKERLARMHDAFSAF 50 >gi|313814041|gb|EFS51755.1| iron-sulfur cluster-binding protein [Propionibacterium acnes HL025PA1] Length = 511 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ CA C CP Y Y GP A+L R + D Sbjct: 340 RCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLP--------- 390 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C C + CP + + K++ ++ Sbjct: 391 ---YACSLCGACNEVCPVKIPFTDILLKLRNKVVK 422 >gi|196935974|gb|ACG80609.1| iron-sulfur-binding reductase [Burkholderia andropogonis] Length = 293 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 W + R + E + ++ ++ C T NC CP G I ++ L+ Sbjct: 12 WAVQERKAEELELIGDVMTEDEIWSCTTCRNCEDQCPVGNEHVDKIIDLRRQLV 65 >gi|225164567|ref|ZP_03726816.1| Fe-S oxidoreductase-like protein [Opitutaceae bacterium TAV2] gi|224800826|gb|EEG19173.1| Fe-S oxidoreductase-like protein [Opitutaceae bacterium TAV2] Length = 529 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%) Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +CP+Y P + R + D + E D + Y C Sbjct: 1 MHCGMCLPTCPTYDATKLERHSPRGRIALMRAIADGKIEATKAFGDEM------YFCLGC 54 Query: 231 MNCTQSCPKGLNPAKAIAKIKMML 254 + C +CP G+N A+ + + Sbjct: 55 LACETACPAGVNYAQLFETARAEV 78 >gi|311069360|ref|YP_003974283.1| glycolate oxidase iron-sulfur subunit [Bacillus atrophaeus 1942] gi|310869877|gb|ADP33352.1| glycolate oxidase iron-sulfur subunit [Bacillus atrophaeus 1942] Length = 451 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K +++ ++R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTAKEMEQIQTEFKERMDEGELLNCMRCGFCLPSCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + E + L C C CP G+N + + + + ++ K Sbjct: 61 VDGKIEPDEDV------ERSLALCLGCRACEPVCPSGVNYGQLLEEARDIINQNK 109 >gi|299132389|ref|ZP_07025584.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] gi|298592526|gb|EFI52726.1| protein of unknown function DUF224 cysteine-rich region domain protein [Afipia sp. 1NLS2] Length = 433 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L+ + + L CV C C+ +CP+Y D P + + Sbjct: 2 QTNFSDAQLRDPATARSNEILRSCVHCGFCTATCPTYKVLGDELDSPRGRIYLIK----- 56 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + ++ + + RC + ++C +CP G++ + + + Sbjct: 57 -DMLENNKVPDATTVLHIDRCLSCLSCMTTCPSGVHYMHLVDHAREYI 103 >gi|303247134|ref|ZP_07333409.1| putative heterodisulfide reductase, C subunit [Desulfovibrio fructosovorans JJ] gi|302491560|gb|EFL51445.1| putative heterodisulfide reductase, C subunit [Desulfovibrio fructosovorans JJ] Length = 182 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 15/98 (15%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLD 216 E D + C+ C C+ SCP+ + +R L DE R Sbjct: 10 PELEAVRDMVRSCLQCGTCTASCPNAAAMD------VSPRRLWRLLTTGHADEALASR-- 61 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C + CT CP+GL A+A ++ + Sbjct: 62 ------SFWLCSSCYACTLRCPRGLPLTDAMAALRRLA 93 >gi|254481583|ref|ZP_05094827.1| Cysteine-rich domain protein [marine gamma proteobacterium HTCC2148] gi|214038211|gb|EEB78874.1| Cysteine-rich domain protein [marine gamma proteobacterium HTCC2148] Length = 408 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E ++ + + CV C C +CP+Y D P + + L++ + Sbjct: 4 ELHPRYSDNTEAKRAGELISACVHCGLCLATCPTYLDTGDERDSPRGRIYLLKQLLEEGE 63 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R L RC + +C +CP G+ K A I +L Sbjct: 64 AGAVTR-------THLDRCLSCRSCETACPSGMQYGKL-ADIGRGML 102 >gi|15614698|ref|NP_243001.1| glycolate oxidase iron-sulfur subunit [Bacillus halodurans C-125] gi|10174754|dbj|BAB05854.1| glycolate oxidase iron-sulfur subunit [Bacillus halodurans C-125] Length = 451 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + +CV C C +CP+Y P + + + E + E + Sbjct: 21 DHPDPNKWADCVHCGMCLEACPTYELTGHEQQSPRGRVHLIKSVA----EGKLEVNEAFA 76 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 DP ++ C C +CP + I + + + Sbjct: 77 DP--VFTCLDCRACETACPADVEVGGLIEEARGQI 109 >gi|171912069|ref|ZP_02927539.1| hypothetical protein VspiD_12855 [Verrucomicrobium spinosum DSM 4136] Length = 455 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 6/91 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C +CP+Y P + R + D D + Y C Sbjct: 25 QCMHCGMCLPTCPTYVETKRERNSPRGRIALMRAMADGEVPVTRSFADEM------YYCL 78 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C +CP G+N + + + + Sbjct: 79 GCLACQTACPAGVNYVELFETSRAEVERSGV 109 >gi|56963941|ref|YP_175672.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] gi|56910184|dbj|BAD64711.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] Length = 444 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + +CV C C SCP+Y P + + + + + E +D Sbjct: 19 DAPDENKWADCVHCGMCLESCPTYEITGQEQHSPRGRVHLIKSVAEGKLEVNEPFIDP-- 76 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +Y+C CT +CP ++ I + + + Sbjct: 77 ----VYQCLDCRACTTACPADVDVGGLIEEARGQI 107 >gi|56965650|ref|YP_177384.1| Fe-S oxidoreductase [Bacillus clausii KSM-K16] gi|56911896|dbj|BAD66423.1| Fe-S oxidoreductase [Bacillus clausii KSM-K16] Length = 693 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 31/160 (19%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY--- 183 V + + R + + + +++++ LY CV C C+ CP+ Sbjct: 238 VFLGRTHKVGRLAKIDFEQEDAEEFGVGKIEDFNQKQLLDLYACVECGRCTNMCPATGTG 297 Query: 184 ----------------------------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 W + + A ++ + + Sbjct: 298 KMLSPMDLLLRMRDHLTEKGAAITSRTPWMPAYAFANTRANTLATESAQEAAAGYDVRLI 357 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ ++ C T NC CP I ++ L+ Sbjct: 358 GDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 397 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P + +++ L ++ Sbjct: 278 LYACVECGRCTNMCPATGTGKMLSPMDLLLRMRDHLTEKG 317 >gi|116748617|ref|YP_845304.1| hypothetical protein Sfum_1176 [Syntrophobacter fumaroxidans MPOB] gi|116697681|gb|ABK16869.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 375 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 12/103 (11%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + E+ K + C+ C C+ SCP + P I+++ L+D DE +R Sbjct: 1 MNVEEAIKTYRTFYCLDCGVCTGSCPVSRVHPS--FSPRIIVEKA--LLDLGDELLKDR- 55 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP ++ + + ++ R Sbjct: 56 -------ELWSCLTCGRCFERCPTNIDFPEFMRALREEAARRG 91 >gi|317484364|ref|ZP_07943283.1| iron-sulfur cluster-binding protein [Bilophila wadsworthia 3_1_6] gi|316924372|gb|EFV45539.1| iron-sulfur cluster-binding protein [Bilophila wadsworthia 3_1_6] Length = 718 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 13/95 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 CV C C+ CP Y Y+ + +L +D + Sbjct: 310 QALRCVRCGACANVCPVYRLVGGHRMGYIYIGAIGLILTYLFHGKDRAKAL--------- 360 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C C G++ I +I+M +++ Sbjct: 361 -VQNCVNCQACKSVCAAGIDLPGLIEEIRMRYIEQ 394 >gi|167462609|ref|ZP_02327698.1| Iron-sulphur-binding reductase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 775 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%) Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + Q + W + ++ E L ++ ++ C T NC CP G I + Sbjct: 405 IAHTMNTQKHSWTVSDKNAEDVELLGDVMTDDEIWSCTTCRNCEDQCPVGNEHVDKIIDL 464 Query: 251 KMMLL 255 + L+ Sbjct: 465 RRHLV 469 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L+D+ Sbjct: 323 FYSCVECGRCTNVCPASNTGKLLSPMHLIVKLRDHLIDKG 362 >gi|224824679|ref|ZP_03697786.1| FAD linked oxidase domain protein [Lutiella nitroferrum 2002] gi|224603172|gb|EEG09348.1| FAD linked oxidase domain protein [Lutiella nitroferrum 2002] Length = 944 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 8/89 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG----ERLDNLEDPFR 223 +C+ C C CPS L P + A R + R L+ L Sbjct: 542 DKCIECGFCEVMCPSRAIT----LTPRQRIVANREMAALRSAGDAPDRLAELEALYQYAG 597 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 C T C +CP G+N K +I+ Sbjct: 598 DDTCTTCGLCETACPVGINTGKLTTQIRQ 626 >gi|312131232|ref|YP_003998572.1| hypothetical protein Lbys_2557 [Leadbetterella byssophila DSM 17132] gi|311907778|gb|ADQ18219.1| protein of unknown function DUF224 cysteine-rich region domain protein [Leadbetterella byssophila DSM 17132] Length = 437 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 12/102 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL--------QAYRWLIDSRDEFQG 212 + + Y C C C++SCP+ + L P ++ + R EF+ Sbjct: 299 WKSLMDAYTCTECGRCTSSCPANIT--GKALSPRKIMTDTRDRLEEIQRGWAQHGPEFKD 356 Query: 213 ER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 E+ L + + C + C Q CP ++P I +++ Sbjct: 357 EKSLLGDYITDEEILACTSCNACVQECPVMISPLNIILELRR 398 >gi|182678868|ref|YP_001833014.1| hypothetical protein Bind_1901 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634751|gb|ACB95525.1| protein of unknown function DUF224 cysteine-rich region domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 445 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L++ + L CV C C+ +CP++ ++ P + + +++ + E Sbjct: 10 LENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLEHGRQADAET 69 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +++ RC + ++C +CP G++ + + + + Sbjct: 70 VKHID------RCLSCLSCMTTCPSGVHYMHLVDHARAHIEE 105 >gi|209520368|ref|ZP_03269132.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] gi|209499200|gb|EDZ99291.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia sp. H160] Length = 641 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ CV C C +CP++ + L P L+Q + + Q Sbjct: 245 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAQYAGSPTPGI 302 Query: 212 ----------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L + L+ C T C Q CP + AI ++ Sbjct: 303 PVGKHGGGPGKPLISTLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 353 >gi|327311865|ref|YP_004338762.1| iron-sulfur binding reductase [Thermoproteus uzoniensis 768-20] gi|326948344|gb|AEA13450.1| iron-sulfur binding reductase, putative [Thermoproteus uzoniensis 768-20] Length = 645 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 7/98 (7%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C C C CP+ R L P +L+ S + + Sbjct: 266 DMEPLHRIMVDACTRCNRCEDVCPATRA--GRPLSPRVLINKI-----SGADIDKSFFEL 318 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C SCP + I I+ L+ Sbjct: 319 GLQEDEVWACTTCGACMLSCPVYIRHIDYIIDIRRGLV 356 >gi|169236879|ref|YP_001690079.1| iron-sulfur protein (4Fe-4S) [Halobacterium salinarum R1] gi|167727945|emb|CAP14733.1| iron-sulfur protein (4Fe-4S) [Halobacterium salinarum R1] Length = 711 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 11/121 (9%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P + ED L C C CS+ CP+ R L P ++ + Sbjct: 280 PADASPEEIGPSEIEDFSWKQLLDHDACTKCGRCSSVCPAKAA--GRPLDPRDVILDLKS 337 Query: 203 LIDSRDEFQGERLDN-------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + E +D + D + C + M C +CP + ++ L Sbjct: 338 YREGVASGDREEVDIVADGGTSVIDASTMESCMSCMACMDACPVDIEHVTQFTEMNRRLT 397 Query: 256 D 256 + Sbjct: 398 E 398 >gi|15791124|ref|NP_280948.1| heterodisulfide reductase [Halobacterium sp. NRC-1] gi|10581732|gb|AAG20428.1| heterodisulfide reductase [Halobacterium sp. NRC-1] Length = 677 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 11/121 (9%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P + ED L C C CS+ CP+ R L P ++ + Sbjct: 246 PADASPEEIGPSEIEDFSWKQLLDHDACTKCGRCSSVCPAKAA--GRPLDPRDVILDLKS 303 Query: 203 LIDSRDEFQGERLDN-------LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + E +D + D + C + M C +CP + ++ L Sbjct: 304 YREGVASGDREEVDIVADGGTSVIDASTMESCMSCMACMDACPVDIEHVTQFTEMNRRLT 363 Query: 256 D 256 + Sbjct: 364 E 364 >gi|256371676|ref|YP_003109500.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008260|gb|ACU53827.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 386 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 14/102 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA--ILLQAYRWLIDSRDEFQG 212 + S ++D C+ C C CP + + GP R++ G Sbjct: 1 MVSTATALRLDNADACIKCGLCQLVCPVLEVDP-AFSGPKVLGPDWHRRFVA-------G 52 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ER+ RC C CP G+ A IA+ K L Sbjct: 53 ERV----TDDTAARCTFCQLCESVCPVGVPIAHLIAEHKSHL 90 >gi|187919770|ref|YP_001888801.1| hypothetical protein Bphyt_5067 [Burkholderia phytofirmans PsJN] gi|187718208|gb|ACD19431.1| protein of unknown function DUF224 cysteine-rich region domain protein [Burkholderia phytofirmans PsJN] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--------- 211 ++ CV C C +CP++ + L P L+Q + + Q Sbjct: 241 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAQYAGSPTPGI 298 Query: 212 ----------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + + + L+ C T C Q CP + AI ++ Sbjct: 299 PVGKHAGAPDKPLISTMIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 349 >gi|219849493|ref|YP_002463926.1| hypothetical protein Cagg_2621 [Chloroflexus aggregans DSM 9485] gi|219543752|gb|ACL25490.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aggregans DSM 9485] Length = 713 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 26/165 (15%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRS------IEPWLKTVSPKPAKELLQSHED--RQKIDGL 167 LP L ++ F+ + I + + + + + D ++ L Sbjct: 251 LPFSKFRHILYTPLNTFFRDLQPKGALDPIPNLEAEIEKEEPRLGVATLADLTWKQRMDL 310 Query: 168 YECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDE------------FQG 212 C+ C C + CP++ S +Y+ + I +D Sbjct: 311 DACMRCGRCQSVCPAHASGALLSPKYIITKLADLQRGDPIHFKDGTIKTLAELNGNGATV 370 Query: 213 ERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E L + + L+ C T C CP + I ++ L Sbjct: 371 ETLPLVGTVIEAEELWACTTCNACVHECPAMIEHVDDIVNMRRHL 415 >gi|311107884|ref|YP_003980737.1| cysteine-rich domain-containing protein [Achromobacter xylosoxidans A8] gi|310762573|gb|ADP18022.1| cysteine-rich domain protein [Achromobacter xylosoxidans A8] Length = 455 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C+ CP+Y + + P + R ++DS + + +L+ RC + Sbjct: 20 CVHFGFCTAVCPTYVLDGEELDSPRGRIALAREMLDSGNAPSPAAVRHLD------RCLS 73 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++C +C G++ I + + K Sbjct: 74 CLSCETTCAAGVSYHAIIDGAREHIEQSK 102 >gi|169826554|ref|YP_001696712.1| hypothetical protein Bsph_0970 [Lysinibacillus sphaericus C3-41] gi|168991042|gb|ACA38582.1| Hypothetical ywjF protein [Lysinibacillus sphaericus C3-41] Length = 620 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 34/152 (22%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY------------- 183 ++E ++++ LY CV C C+ CP+ Sbjct: 132 EALENAESEEDMPSIGVGRIQDFTQKQMLDLYSCVECGRCTNMCPATGTGKMLSPMDLIV 191 Query: 184 ------------------WWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDNLEDPF 222 W + A + D + + ++ Sbjct: 192 KLRDHLTFTGAVVTKQKPWVPYQFFANTKGNQLAMAAGAEGAVIEDIYSPALIGDVITEE 251 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C T NC CP I ++ L Sbjct: 252 EIWACTTCRNCEDQCPVMNEHVDKIIDLRRYL 283 >gi|91778525|ref|YP_553733.1| hypothetical protein Bxe_B1581 [Burkholderia xenovorans LB400] gi|91691185|gb|ABE34383.1| putative membrane protein [Burkholderia xenovorans LB400] Length = 637 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 21/111 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEF--------- 210 ++ CV C C +CP++ + L P L+Q ++ D Sbjct: 241 WNQLLSFDACVQCGKCEAACPAFAA--GQPLNPKKLIQDLVTGMVGGTDAGYAGSPTPGI 298 Query: 211 ---------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +L + L+ C T C Q CP + AI ++ Sbjct: 299 PVGKHGGAPGKPLISSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRR 349 >gi|118471642|ref|YP_885098.1| iron-sulfur cluster-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118172929|gb|ABK73825.1| iron-sulfur cluster-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 1042 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R E + DP L+ C C + CP + I ++ + Sbjct: 392 RPLVGTEEQGGVIDPDVLWSCTNCGACVEQCPVDIEHIDHIVDMRRYQV 440 >gi|296158340|ref|ZP_06841171.1| protein of unknown function DUF162 [Burkholderia sp. Ch1-1] gi|295891284|gb|EFG71071.1| protein of unknown function DUF162 [Burkholderia sp. Ch1-1] Length = 471 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ + LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDKALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|187924561|ref|YP_001896203.1| hypothetical protein Bphyt_2584 [Burkholderia phytofirmans PsJN] gi|187715755|gb|ACD16979.1| protein of unknown function DUF162 [Burkholderia phytofirmans PsJN] Length = 471 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ + LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDKALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|91784253|ref|YP_559459.1| putative iron-sulfur binding protein [Burkholderia xenovorans LB400] gi|91688207|gb|ABE31407.1| Putative iron-sulfur binding protein [Burkholderia xenovorans LB400] Length = 471 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ + LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDKALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ ++R++ Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQVERRL 392 >gi|320352521|ref|YP_004193860.1| hypothetical protein Despr_0387 [Desulfobulbus propionicus DSM 2032] gi|320121023|gb|ADW16569.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobulbus propionicus DSM 2032] Length = 451 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + L +C+ C C CP Y + + ++D + E LD Sbjct: 18 HDDLAIVREELDKCMKCGNCMAVCPVYGADKLETSVTRSKIAVAEAVLDGQLE-----LD 72 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + L+ C +C +CP +N + I ++ L+ + Sbjct: 73 DPQVYEMLFNCLVCKSCMTNCPTKVNFGRIILALRAALVRK 113 >gi|167903441|ref|ZP_02490646.1| putative iron-sulfur binding protein [Burkholderia pseudomallei NCTC 13177] Length = 638 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYIGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|167619404|ref|ZP_02388035.1| iron-sulfur cluster binding protein [Burkholderia thailandensis Bt4] gi|257138603|ref|ZP_05586865.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] Length = 479 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ R L Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLGR---------AL 354 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + P C CP G+ + + K++ ++R++ Sbjct: 355 DLPQAA---TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|167581322|ref|ZP_02374196.1| iron-sulfur cluster binding protein [Burkholderia thailandensis TXDOH] Length = 479 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ R L Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLGR---------AL 354 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + P C CP G+ + + K++ ++R++ Sbjct: 355 DLPQAA---TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|83721088|ref|YP_442401.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] gi|83654913|gb|ABC38976.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] Length = 522 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ R L Sbjct: 347 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLGR---------AL 397 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + P C CP G+ + + K++ ++R++ Sbjct: 398 DLPQAA---TLCGECDSVCPVGIPISGLLRKLREKQVERRL 435 >gi|54633796|gb|AAV36008.1| hydrogenosomal succinate dehydrogenase beta subunit [Nyctotherus ovalis] Length = 99 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 51/99 (51%), Positives = 67/99 (67%), Gaps = 3/99 (3%) Query: 84 ICGSCGMNIDGTNTLACVK-DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 ICGSC MNIDG + LAC+ K+ + PL M+V++DLVVDMS+FY+Q++ I+P Sbjct: 1 ICGSCSMNIDGRHNLACIAAIPKNNLEKSFIAPLTSMNVLRDLVVDMSNFYNQYKVIQPH 60 Query: 143 LKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 LK + KE QS E+R KIDGLYECV+C CS+S Sbjct: 61 LKRKTLKQPNEKEYHQSIEERAKIDGLYECVLCLSCSSS 99 >gi|18312524|ref|NP_559191.1| glycolate oxidase subunit glcF [Pyrobaculum aerophilum str. IM2] gi|18159988|gb|AAL63373.1| glycolate oxidase subunit glcF [Pyrobaculum aerophilum str. IM2] Length = 386 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D LY CV C C +CP+Y P L R +++ R +G+ L+ L+ Sbjct: 1 MSAFDELYRCVHCGFCLPTCPTYLATGLEGNSPRGRLHLMRAVVEGRARAEGKLLEYLD- 59 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 C + C +CP G+ + Sbjct: 60 -----SCVYCLRCETACPSGVKYGTVFEE 83 >gi|197117747|ref|YP_002138174.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] gi|197087107|gb|ACH38378.1| iron-sulfur cluster-binding oxidoreductase lipoprotein [Geobacter bemidjiensis Bem] Length = 658 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE----RLD 216 + + + C C C +CP+ + L P +++ + + + + Sbjct: 264 WKDLFDSFSCTECGRCENACPAAAT--GKPLNPRLVMHDIKVNLLANGAQLQRGGVATVP 321 Query: 217 NLEDPFR------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + L+ C T C +CP + I K++ L+ Sbjct: 322 VIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINKMRRHLVQ 367 >gi|325001778|ref|ZP_08122890.1| Fe-S oxidoreductase [Pseudonocardia sp. P1] Length = 464 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + L +CV C C +CP+Y + P + L+D E LD Sbjct: 33 PQRELLDDCVHCGFCLPTCPTYVLWGEEMDSPRGRI----LLMD-LAEKGDIALDGPFTE 87 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C M C +CP G+ K + ++ Sbjct: 88 H-IDNCLGCMACVTACPSGVQYDKLLESVR 116 >gi|126459838|ref|YP_001056116.1| hypothetical protein Pcal_1225 [Pyrobaculum calidifontis JCM 11548] gi|126249559|gb|ABO08650.1| protein of unknown function DUF162 [Pyrobaculum calidifontis JCM 11548] Length = 379 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 50/178 (28%), Gaps = 19/178 (10%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIA-----VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 + DG + + + +YP ++++ + + Sbjct: 213 HIVYDGVEKVVPTLHHAFMSAMVQSAYAGLYPPTYVNLSAGPSSTADVEMRRVSPAQGPR 272 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAY 200 + ++ +D + C+ C C CP Y + P + + Sbjct: 273 EFHVVLVDNGRRKAAKD-PDLWEALLCIRCGRCHLHCPVYLTLGREFGRPPYTGPMGVMW 331 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +E L C NC + CP ++ K I I+ L + Sbjct: 332 TAVTRGIEEAGPHALK----------CVHAGNCREVCPMSIDIPKVIHAIRARYLRAR 379 >gi|474047|emb|CAA53458.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 96 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 51/95 (53%), Positives = 74/95 (77%), Gaps = 2/95 (2%) Query: 133 YSQHRSIEPWLKTVSPKP--AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + Q+RSI+PWL+ +P K++ QS + R+++D LYEC++C CCS+SCPSYWWN+D+Y Sbjct: 1 FEQYRSIQPWLQKKAPLKLGDKQMFQSEKARERLDMLYECILCRCCSSSCPSYWWNADKY 60 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 LGPA+L+QAYRW+IDSRD++ ERL + D F + Sbjct: 61 LGPAVLMQAYRWIIDSRDDYPKERLARMHDAFSAF 95 >gi|240949318|ref|ZP_04753661.1| putative electron transport protein [Actinobacillus minor NM305] gi|240296269|gb|EER46918.1| putative electron transport protein [Actinobacillus minor NM305] Length = 469 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + ++++ + Sbjct: 365 LCNACNSVCPVKIPLAQLILKHREKMVEQGL 395 >gi|126652590|ref|ZP_01724754.1| iron-sulfur oxidoreductase [Bacillus sp. B14905] gi|126590581|gb|EAZ84698.1| iron-sulfur oxidoreductase [Bacillus sp. B14905] Length = 739 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 36/179 (20%) Query: 110 AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 + V PL D ++ ++E ++++ LY Sbjct: 226 HLIVSPLNVYMNRLDRTGTLTPID--FEALENAESEDDMPSIGVGRIQDFTQKQMLDLYS 283 Query: 170 CVMCACCSTSCPSYWWNSD--------------RYLGPAILLQA----YRWLIDSR---- 207 CV C C+ CP+ + G + Q Y++ +++ Sbjct: 284 CVECGRCTNMCPATGTGKMLSPMDLIVKLRDHLTFTGAVVTKQKPWVPYQFFANTKGNQL 343 Query: 208 ------------DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + + ++ ++ C T NC CP I ++ L Sbjct: 344 ALAAGAEGAVIEDIYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYL 402 >gi|295704754|ref|YP_003597829.1| 4Fe-4S binding domain-containing protein [Bacillus megaterium DSM 319] gi|294802413|gb|ADF39479.1| 4Fe-4S binding domain protein [Bacillus megaterium DSM 319] Length = 439 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 Q+ ++R D L C+ C C SCP+Y N P + + ++D E Sbjct: 9 QAFKERLDYDELMNCMRCGFCLPSCPTYGQTNQYEAASPRGRIALMKGVVDGLIEPDESV 68 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+ + + + ++ +K Sbjct: 69 EKQLN------LCLGCRACEPVCPSGVKYGHLLEEARDIIQQKK 106 >gi|294499403|ref|YP_003563103.1| 4Fe-4S binding domain-containing protein [Bacillus megaterium QM B1551] gi|294349340|gb|ADE69669.1| 4Fe-4S binding domain protein [Bacillus megaterium QM B1551] Length = 439 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 Q+ ++R D L C+ C C SCP+Y N P + + ++D E Sbjct: 9 QAFKERLDYDELMNCMRCGFCLPSCPTYGQTNQYEAASPRGRIALMKGVVDGLIEPDESV 68 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+ + + + ++ +K Sbjct: 69 EKQLN------LCLGCRACEPVCPSGVKYGHLLEEARDIIQQKK 106 >gi|297623798|ref|YP_003705232.1| hypothetical protein Trad_1570 [Truepera radiovictrix DSM 17093] gi|297164978|gb|ADI14689.1| protein of unknown function DUF224 cysteine-rich region domain protein [Truepera radiovictrix DSM 17093] Length = 419 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 7/90 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C +CPSY + P + + ++ L E Sbjct: 16 PMAAAVEACVHCGFCLPTCPSYVVTGEEMHSPRGRILLMKETLEGT-------LPLAEAT 68 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C + C +CP G+ + I + Sbjct: 69 PYLDTCLGCLACVTACPSGVKYGELITPFR 98 >gi|325290623|ref|YP_004266804.1| protein of unknown function DUF224 cysteine-rich region domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324966024|gb|ADY56803.1| protein of unknown function DUF224 cysteine-rich region domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 411 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L C C C +C +Y + +L +Q + L D + E + D + Sbjct: 5 AEVYEKLNTCGKCGFCHGACKTYKNDGAEFLVARGRVQLIKALADGKVEADDDYEDAVN- 63 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ + + + L Sbjct: 64 -----SCLLCGECAVACPSGVRGHELVLAARRDL 92 >gi|320334593|ref|YP_004171304.1| hypothetical protein Deima_1994 [Deinococcus maricopensis DSM 21211] gi|319755882|gb|ADV67639.1| protein of unknown function DUF224 cysteine-rich region domain protein [Deinococcus maricopensis DSM 21211] Length = 1006 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 21/134 (15%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 E +++ PK + L+ E ++ Y C+ C C CP + + L PA L Sbjct: 268 EAAMESEEPKLGAQHLEDLE-WPRLLDAYACIQCNRCQDVCP--GSATGKALSPAALEIN 324 Query: 200 YRWLID------------------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 R ++ L+ ++ C T C Q CP Sbjct: 325 KRMELNVIGAHPSPFRLTQTAAFEGGASTARPLLEFAISDEAVWACTTCGACMQVCPVQD 384 Query: 242 NPAKAIAKIKMMLL 255 I I+ + Sbjct: 385 EQMLDIIDIRRRQV 398 >gi|332968716|gb|EGK07768.1| (S)-2-hydroxy-acid oxidase subunit F [Desmospora sp. 8437] Length = 458 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 6/89 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C +CP+Y P + + + D +D + Sbjct: 32 ELTHCMRCGFCLPACPTYRETGREAASPRGRIALMKAVNDGLMAPDEAFVDQMN------ 85 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP + + + + + + Sbjct: 86 YCLGCRACESACPADVKFGRLLEQSRAAI 114 >gi|318042818|ref|ZP_07974774.1| Fe-S oxidoreductase [Synechococcus sp. CB0101] Length = 451 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 6/84 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C +C SY P + A + + E C Sbjct: 12 DPCVHCGFCLPTCASYRVLGTEMDSPRGRIHALKAIAAGELELDAT------TASHFDSC 65 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C +CP G+ + I + Sbjct: 66 LGCFACVSACPSGVRYDELIEATR 89 >gi|108760444|ref|YP_628566.1| putative iron-sulfur cluster binding protein [Myxococcus xanthus DK 1622] gi|108464324|gb|ABF89509.1| putative iron-sulfur cluster binding protein [Myxococcus xanthus DK 1622] Length = 735 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 17/155 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 H +I L F H + + + + ++ LY C C C Sbjct: 248 KHFHIITGLPTVF--FQRTHSTGKLPTPDLEKEEFGTATVKDLTWKQGLDLYSCTECGRC 305 Query: 177 STSCPSYWWNSDRYLGPAILLQAYR-------------WLIDSRDEFQGERLDNLEDPFR 223 T CP+Y + L + Q + + + E E + + Sbjct: 306 QTHCPTYIT--GKPLTHKGVNQDLKHWIWGNEQWVEEGYGPNGIKEPLPEIVGSALSAET 363 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C Q+CP + + ++ + K Sbjct: 364 VWACTSCGWCEQACPVFIENVPRLIDMRRYQVQVK 398 Score = 39.0 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 33/129 (25%), Gaps = 5/129 (3%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 C + I PL H V +DL + P P Sbjct: 299 CTECGRCQTHCPTYITGKPLTHKGVNQDLKHWIWGNEQWVEEGYGPNGIKEPLPEIVGSA 358 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C C C +CP + N R + + + E ++ Sbjct: 359 LSAETVWA-----CTSCGWCEQACPVFIENVPRLIDMRRYQVQVKAEFPPEIQRVFEGIE 413 Query: 217 NLEDPFRLY 225 +P+ L Sbjct: 414 RQGNPWGLG 422 >gi|186476221|ref|YP_001857691.1| hypothetical protein Bphy_1463 [Burkholderia phymatum STM815] gi|184192680|gb|ACC70645.1| protein of unknown function DUF162 [Burkholderia phymatum STM815] Length = 470 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 53/195 (27%), Gaps = 35/195 (17%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + + + + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATAMRLLPRSATGQDVSNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQ--------------KIDGLYECVMCACCSTSCPSY-----W 184 ++ E + C+ C C CP Y Sbjct: 270 SVLTGPRGVHDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHCPVYQKVGGH 329 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y GP + ++ + LD + C CP G+ + Sbjct: 330 TYGWVYPGPMGSVLTPSYV------GIEKALDLPQAA------TLCGECNSVCPVGIPLS 377 Query: 245 KAIAKIKMMLLDRKI 259 + K++ ++R + Sbjct: 378 DLLRKLRERQVERHL 392 >gi|154687004|ref|YP_001422165.1| YsfD [Bacillus amyloliquefaciens FZB42] gi|154352855|gb|ABS74934.1| YsfD [Bacillus amyloliquefaciens FZB42] Length = 442 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K + ++R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTAKEQKHIQTEFKNRMDEGELLNCMRCGFCLPSCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+N + + + + Sbjct: 61 TDGLIEPDEDV------ERSLSLCLGCRACEPVCPAGVNYGQLLEEAR 102 >gi|217421204|ref|ZP_03452709.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] gi|217396616|gb|EEC36633.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|167895054|ref|ZP_02482456.1| putative iron-sulfur binding protein [Burkholderia pseudomallei 7894] Length = 638 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|167739349|ref|ZP_02412123.1| putative iron-sulfur binding protein [Burkholderia pseudomallei 14] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|134277987|ref|ZP_01764702.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 305] gi|134251637|gb|EBA51716.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 305] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|124385092|ref|YP_001029040.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] gi|124293112|gb|ABN02381.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] Length = 536 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 357 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 413 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 414 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 445 >gi|53719903|ref|YP_108889.1| putative iron-sulfur binding protein [Burkholderia pseudomallei K96243] gi|167816564|ref|ZP_02448244.1| putative iron-sulfur binding protein [Burkholderia pseudomallei 91] gi|167919690|ref|ZP_02506781.1| putative iron-sulfur binding protein [Burkholderia pseudomallei BCC215] gi|52210317|emb|CAH36296.1| putative iron-sulfur binding protein [Burkholderia pseudomallei K96243] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|87123179|ref|ZP_01079030.1| Fe-S oxidoreductase [Synechococcus sp. RS9917] gi|86168899|gb|EAQ70155.1| Fe-S oxidoreductase [Synechococcus sp. RS9917] Length = 452 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 6/99 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D C+ C C +C SY P + + + E LD Sbjct: 1 MAIADPTDPCIHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAI-----EAGELSLDATVA 55 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP G+ + I + L ++ Sbjct: 56 SH-FDSCLGCFACVSACPSGVRYDQLIEATRPKLNKAEL 93 >gi|126453135|ref|YP_001066912.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1106a] gi|167846477|ref|ZP_02471985.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei B7210] gi|242314454|ref|ZP_04813470.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1106b] gi|126226777|gb|ABN90317.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1106a] gi|242137693|gb|EES24095.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1106b] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|76812041|ref|YP_334123.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] gi|254261629|ref|ZP_04952683.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710a] gi|76581494|gb|ABA50969.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] gi|254220318|gb|EET09702.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710a] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|167911690|ref|ZP_02498781.1| putative iron-sulfur binding protein [Burkholderia pseudomallei 112] gi|254184362|ref|ZP_04890952.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1655] gi|184214893|gb|EDU11936.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1655] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|53723807|ref|YP_103332.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 23344] gi|67643004|ref|ZP_00441754.1| iron-sulfur cluster binding protein [Burkholderia mallei GB8 horse 4] gi|121600529|ref|YP_993533.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei SAVP1] gi|126438568|ref|YP_001059629.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 668] gi|126450552|ref|YP_001081040.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|167000645|ref|ZP_02266456.1| iron-sulfur cluster binding protein [Burkholderia mallei PRL-20] gi|167720357|ref|ZP_02403593.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei DM98] gi|167824959|ref|ZP_02456430.1| putative iron-sulfur cluster-binding protein [Burkholderia pseudomallei 9] gi|226195496|ref|ZP_03791084.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei Pakistan 9] gi|254177527|ref|ZP_04884182.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|254191396|ref|ZP_04897900.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254200290|ref|ZP_04906656.1| iron-sulfur cluster binding protein [Burkholderia mallei FMH] gi|254209366|ref|ZP_04915712.1| iron-sulfur cluster binding protein [Burkholderia mallei JHU] gi|254297026|ref|ZP_04964479.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 406e] gi|254357963|ref|ZP_04974236.1| iron-sulfur cluster binding protein [Burkholderia mallei 2002721280] gi|52427230|gb|AAU47823.1| iron-sulfur cluster-binding protein, putative [Burkholderia mallei ATCC 23344] gi|121229339|gb|ABM51857.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei SAVP1] gi|126218061|gb|ABN81567.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 668] gi|126243422|gb|ABO06515.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|147749886|gb|EDK56960.1| iron-sulfur cluster binding protein [Burkholderia mallei FMH] gi|147750139|gb|EDK57210.1| iron-sulfur cluster binding protein [Burkholderia mallei JHU] gi|148027090|gb|EDK85111.1| iron-sulfur cluster binding protein [Burkholderia mallei 2002721280] gi|157807228|gb|EDO84398.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 406e] gi|157939068|gb|EDO94738.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160698566|gb|EDP88536.1| putative iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|225932456|gb|EEH28455.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei Pakistan 9] gi|238524241|gb|EEP87675.1| iron-sulfur cluster binding protein [Burkholderia mallei GB8 horse 4] gi|243063453|gb|EES45639.1| iron-sulfur cluster binding protein [Burkholderia mallei PRL-20] Length = 483 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|312963509|ref|ZP_07777991.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] gi|311282315|gb|EFQ60914.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] Length = 646 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 17/115 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAY--------RWL 203 ++ G CV C C +CP++ D +G A A + + Sbjct: 236 WNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPI 295 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ L D L+ C C + CP + AI ++ L K Sbjct: 296 GEHGGNPHQPIVNGLVDAETLWSCPPCRACVEECPMMIEHVDAIVDMRRHLTLEK 350 >gi|297538483|ref|YP_003674252.1| hypothetical protein M301_1292 [Methylotenera sp. 301] gi|297257830|gb|ADI29675.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylotenera sp. 301] Length = 635 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 28/151 (18%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + I T+ + S ++ G CV C C +CP++ Sbjct: 201 RGELSTALKPIALEAITLENQEFGISKPSDFKWNQLLGFDACVQCGKCEAACPAFAA--G 258 Query: 189 RYLGPAILLQAYRWLIDSRDEF-------------------------QGERLDNLEDPFR 223 + L P L+Q + S DE + +L + Sbjct: 259 QPLNPKKLIQDL-VVGFSHDEKSNGSDAKFAGSPYPGMPIGDHFGSIHAPIVPSLIEAET 317 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ C T C Q CP + AI ++ L Sbjct: 318 LWSCTTCRACVQECPMLIEHVDAIVGLRRNL 348 >gi|118431073|ref|NP_147267.2| hypothetical protein APE_0481.1 [Aeropyrum pernix K1] gi|116062399|dbj|BAA79446.2| hypothetical protein [Aeropyrum pernix K1] Length = 98 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C CP+ + R GP + + R + D E D LY C Sbjct: 13 SKCIYCGFCEPVCPTLPFGRHRGYGPRGRVFSARLVA--LDGKATE-----GDLESLYSC 65 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP ++ + + + ++ Sbjct: 66 LLCGACMEVCPARIDIVSVVREARALI 92 >gi|218289136|ref|ZP_03493372.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240719|gb|EED07898.1| protein of unknown function DUF224 cysteine-rich region domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 722 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 55/212 (25%), Gaps = 74/212 (34%) Query: 118 HMSVIKDLVVDM---SHFYSQHRSIEPWLKTVSPKPAKELLQSHED-------------- 160 H+ V+ +V + HF+ I WL L ++ Sbjct: 203 HLIVLLTFLVYVPQSKHFHLMVAPINIWLHRKGAPGRLRPLNLEDENAESFGVGKVEDFE 262 Query: 161 RQKIDGLYECVMCACCSTSCPS-----------------------------YWWNSDRYL 191 R+++ + CV C C+ SCP+ +L Sbjct: 263 RKQMIDFFACVECGRCTNSCPASNTGKPLSPMHLIVKMRDHLIEKGMAQTGLKAFEPSFL 322 Query: 192 GPAILLQAYRWLIDSRD-------------------------EFQGERLDNLED---PFR 223 P A++ D E L + D Sbjct: 323 LPKREGMAHKMASGGEDIAFPEGVVTDIEPTLHWQQEEWRLTEADPTELSLIGDVITEEE 382 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP G I ++ L+ Sbjct: 383 IWACTTCRNCEDQCPVGNEHVDKIIDLRRYLV 414 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRKI 259 ER ++ + C CT SCP K L+P I K++ L+++ + Sbjct: 262 ERKQMID----FFACVECGRCTNSCPASNTGKPLSPMHLIVKMRDHLIEKGM 309 >gi|16079921|ref|NP_390747.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221310811|ref|ZP_03592658.1| hypothetical protein Bsubs1_15661 [Bacillus subtilis subsp. subtilis str. 168] gi|221315136|ref|ZP_03596941.1| hypothetical protein BsubsN3_15567 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320054|ref|ZP_03601348.1| hypothetical protein BsubsJ_15473 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324336|ref|ZP_03605630.1| hypothetical protein BsubsS_15632 [Bacillus subtilis subsp. subtilis str. SMY] gi|81671645|sp|P94534|GLCF_BACSU RecName: Full=Probable glycolate oxidase iron-sulfur subunit gi|1770025|emb|CAA99598.1| hypothetical protein [Bacillus subtilis] gi|2635334|emb|CAB14829.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 444 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ ++R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTEKEMKQIQNEFKERMDEGELLNCMRCGFCLPSCPTYIESGFQETHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+ + + + + Sbjct: 61 ADGMIEPDEDV------ERSLSLCLGCRACEPVCPSGVKYGQLLEEAR 102 >gi|83591126|ref|YP_431135.1| hypothetical protein Moth_2305 [Moorella thermoacetica ATCC 39073] gi|83574040|gb|ABC20592.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 730 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +C+ CA C+ CP + S + G Y I S Sbjct: 296 RTRMAADPVFKEALQCIRCASCTNVCPVFQLVSGQVYG-----YIYNGGIGSVLTAFFNS 350 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L++ DP L C C + CP +N + K++ ++ ++ Sbjct: 351 LEDAVDPQSL--CIGCRRCAEVCPAKINIPDLVLKLRERVVTKQ 392 >gi|260774227|ref|ZP_05883142.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio metschnikovii CIP 69.14] gi|260611188|gb|EEX36392.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio metschnikovii CIP 69.14] Length = 944 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-ID 205 + P L + C+ C C CPS L P + YR L Sbjct: 521 NTDPHAHLKNLKPMPAADPLVDRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRR 576 Query: 206 SR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 SR +E L ++ + C C + CP G+N I +++ Sbjct: 577 SRAGEEAAASELADVFQYQGIDTCAATGLCAERCPVGINTGDLIKQLRQA 626 >gi|291485301|dbj|BAI86376.1| hypothetical protein BSNT_04189 [Bacillus subtilis subsp. natto BEST195] Length = 444 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ ++R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTEKEMKQIQDKFKERMDEGELLNCMRCGFCLPSCPTYIESGFHETHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+ + + + + Sbjct: 61 ADGMIEPDEDV------ERSLSLCLGCRACEPVCPSGVKYGQLLEEAR 102 >gi|254777252|ref|ZP_05218768.1| hypothetical protein MaviaA2_21644 [Mycobacterium avium subsp. avium ATCC 25291] Length = 958 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R E + DP L+ C T C + CP + I ++ + Sbjct: 378 TRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQV 427 >gi|118462585|ref|YP_883942.1| ferredoxin, 4Fe-4S [Mycobacterium avium 104] gi|118163872|gb|ABK64769.1| ferredoxin, 4Fe-4S [Mycobacterium avium 104] Length = 975 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R E + DP L+ C T C + CP + I ++ + Sbjct: 382 TRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQV 431 >gi|41409929|ref|NP_962765.1| hypothetical protein MAP3831c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398762|gb|AAS06381.1| hypothetical protein MAP_3831c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 959 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R E + DP L+ C T C + CP + I ++ + Sbjct: 382 TRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQV 431 >gi|114566239|ref|YP_753393.1| iron-sulfur-binding reductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337174|gb|ABI68022.1| putative iron-sulfur-binding reductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 714 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 36/193 (18%) Query: 97 TLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 L + + AI + +P + +++ + + + Sbjct: 224 MLMWHRLLWWFHMAIAFLFIALVPFTKLWHIFASMLNYTFRDLEPSANRMVYNIEEAETF 283 Query: 154 LLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAIL-LQAYRWLIDSR--- 207 +++ ED D L C+ C C +CP+Y ++L P I +Q + +D++ Sbjct: 284 GVENIEDFGWKDLLDLDSCIRCGRCQENCPAYNT--GKHLNPKITLIQNMKAHLDAKAPY 341 Query: 208 -------------------------DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + L ++ ++ C C + CP + Sbjct: 342 LLAAKASGAEVEEMAMTEEAAAEEVNPMEQSLLYDVVGSETIWDCTNCRACMEHCPMFIE 401 Query: 243 PAKAIAKIKMMLL 255 I +++ L+ Sbjct: 402 HIPKIVEMRRNLV 414 >gi|325968718|ref|YP_004244910.1| glycolate oxidase subunit F [Vulcanisaeta moutnovskia 768-28] gi|323707921|gb|ADY01408.1| glycolate oxidase subunit F [Vulcanisaeta moutnovskia 768-28] Length = 422 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + Y+CV C C +CP+Y + P + + L+ + + L +L+ Sbjct: 16 NETYKCVHCGFCLPTCPTYRATWNEADSPRGRIYLVKALLTGKLQPTETLLKHLD----- 70 Query: 225 YRCHTIMNCTQSCPKGLNPAKAI 247 C C +CP G+ +K I Sbjct: 71 -ACVICRRCETACPSGVQYSKVI 92 >gi|253577804|ref|ZP_04855076.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850122|gb|EES78080.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 129 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C CS +CPS+ + Q ++++ E ++ L + L++C Sbjct: 21 KCMKCGKCSATCPSFNEMDIK------PHQFVSYVVN-------EDIEALVNSKSLWKCL 67 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP+ + P K I + +++ K Sbjct: 68 SCFACVERCPRDVKPGKIIDAARQLVVREK 97 >gi|269104163|ref|ZP_06156859.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Photobacterium damselae subsp. damselae CIP 102761] gi|268160803|gb|EEZ39300.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Photobacterium damselae subsp. damselae CIP 102761] Length = 941 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 8/107 (7%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + + + + C+ C C +CPS + L P YR + R Sbjct: 525 HQSHIRHLKQMPAADELIDRCIECGFCEPACPSRNLS----LTPRQRNVVYREICRLRKT 580 Query: 210 -FQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ERL +E + L C C CP G+N + K++ Sbjct: 581 NESPERLHQMEQAYQYLGLDTCAATGLCADRCPVGINTGDLVRKLRQ 627 >gi|226941761|ref|YP_002796835.1| ferredoxin [Laribacter hongkongensis HLHK9] gi|226716688|gb|ACO75826.1| Probable ferredoxin [Laribacter hongkongensis HLHK9] Length = 813 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPF---R 223 C+ C C +CPS + L P + +R + D R ERL E + Sbjct: 542 DRCIECGFCEPACPSNGLS----LTPRQRIVLWRAMQDLRRRGTEAERLAAFEAEYPYLG 597 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C CP G+N + ++K Sbjct: 598 IDTCAATGMCATRCPVGINTGTLMKQLK 625 >gi|253701523|ref|YP_003022712.1| hypothetical protein GM21_2925 [Geobacter sp. M21] gi|251776373|gb|ACT18954.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 658 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE----RLD 216 + + + C C C +CP+ + L P +++ + + + + Sbjct: 264 WKDLFDSFSCTECGRCEKACPAAAT--GKPLNPRLVMHDIKVNLLANGTQLQRGGVATVP 321 Query: 217 NLEDPFR------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + L+ C T C +CP + I K++ L+ Sbjct: 322 VIGEGEGSVEADALWSCTTCGACLNACPVFIEQMPKINKMRRHLVQ 367 >gi|297622430|ref|YP_003703864.1| hypothetical protein Trad_0180 [Truepera radiovictrix DSM 17093] gi|297163610|gb|ADI13321.1| protein of unknown function DUF224 cysteine-rich region domain protein [Truepera radiovictrix DSM 17093] Length = 864 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 33/111 (29%), Gaps = 17/111 (15%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-------- 211 ++ Y C+ C C CP+ + L PA L R +++ Sbjct: 288 AWPRLLDAYACIQCNRCQDVCPASAT--GKALSPAALEINKRMELNALAGSPLILKEAPF 345 Query: 212 -------GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L P L+ C T C Q CP I I+ + Sbjct: 346 EAGAPSPRPLLSFALSPEALWACTTCGACMQVCPVEDEQMLDIIDIRRHQV 396 >gi|237813023|ref|YP_002897474.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei MSHR346] gi|237503165|gb|ACQ95483.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei MSHR346] Length = 483 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLGCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|117618001|ref|YP_857066.1| iron-sulfur cluster-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559408|gb|ABK36356.1| iron-sulfur cluster-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 930 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-SRDEFQGERLDNLEDPFRLYR 226 C+ C C CPS + L P + YR L +R + +L L D + Sbjct: 534 DPCIECGFCEAVCPSRTLS----LSPRQRIVLYRELARRNRADEPSNQLARLFDYQGIDT 589 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C CP G+N I K++ R Sbjct: 590 CAATGLCADRCPVGINTGALIKKLRTDKYRR 620 >gi|23100287|ref|NP_693754.1| glycolate oxidase iron-sulfur subunit [Oceanobacillus iheyensis HTE831] gi|22778519|dbj|BAC14788.1| glycolate oxidase iron-sulfur subunit [Oceanobacillus iheyensis HTE831] Length = 443 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + ++R D L C+ C C CP+Y D P + + ++D Sbjct: 2 DTLVKERIQEDFQNRMDRDELENCMRCGFCLPVCPTYIQSGYDETQSPRGRIALMKGIVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + L + C C +CP G+N + + + + Sbjct: 62 GEIEPDEDIEQTLNE------CLGCRACEPACPAGVNYGQLLEEAR 101 >gi|319652877|ref|ZP_08006983.1| hypothetical protein HMPREF1013_03598 [Bacillus sp. 2_A_57_CT2] gi|317395454|gb|EFV76186.1| hypothetical protein HMPREF1013_03598 [Bacillus sp. 2_A_57_CT2] Length = 444 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C CP+ GP + R LI+ E D L+ RC Sbjct: 13 CVRCGACRNVCPTLDITGREADGPRGRVLMARSLIEGNIPVNQEIKDQLD------RCLL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +CP + + K + Sbjct: 67 CSACVDACPIDVQVPDIVMLAKERIAAAA 95 >gi|218782667|ref|YP_002433985.1| heterodisulfide reductase subunit C-like protein [Desulfatibacillum alkenivorans AK-01] gi|218764051|gb|ACL06517.1| Putative heterodisulfide reductase, hybrid of subunits C and E [Desulfatibacillum alkenivorans AK-01] Length = 605 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 10/91 (10%) Query: 167 LYECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+ +CP N LG + R+D L Sbjct: 491 AARCMGCEMCTNACPVPGLCDNPAETLGLMPSQIIRAIGL--------GRVDMALGAGML 542 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C + C CP G+ A A+ +++ + L Sbjct: 543 WSCLSCYRCQDVCPAGVQVADALIELRNIAL 573 Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 8/96 (8%) Query: 166 GLYECVMCACCS---TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L CV C+ C+ + + + + P+ ++ + + E + Sbjct: 328 ELDACVHCSACNLNESMAVLHSLTGNDCILPSEKIRMLKGGLHKLTEQEKCTFGT----- 382 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C+ CP G+ + + +L +K Sbjct: 383 GLTLCTCCDKCSNVCPAGIQLKQIWKSTRGLLFQQK 418 >gi|124024267|ref|YP_001018574.1| Fe-S oxidoreductase [Prochlorococcus marinus str. MIT 9303] gi|123964553|gb|ABM79309.1| Fe-S oxidoreductase [Prochlorococcus marinus str. MIT 9303] Length = 507 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 6/99 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R D CV C C +C SY P + + + + E Sbjct: 43 RLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIDNGELELDATV------ 96 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP G+ + I + +L ++ Sbjct: 97 ASHFDSCLGCFACVSACPSGVRYDQLIEATRPLLNQAEL 135 >gi|282164248|ref|YP_003356633.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] gi|282156562|dbj|BAI61650.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] Length = 181 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 13/101 (12%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + C C C+ CP L +++ + Sbjct: 19 THEVEKGGGENISVCYQCGTCTAGCP---MGRRTALRTRKIMRMTALGL----------K 65 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D L ++ C T CT CP+ + P I ++ M Sbjct: 66 DELMKSDEIWYCSTCYTCTDRCPRHVKPTDVILALRNMATK 106 >gi|321312403|ref|YP_004204690.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis BSn5] gi|320018677|gb|ADV93663.1| glycolate oxidase iron-sulfur subunit [Bacillus subtilis BSn5] Length = 444 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ ++R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTEKEMKQIQVEFKERMDEGELLNCMRCGFCLPSCPTYIESGFQETHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+ + + + + Sbjct: 61 ADGMIEPDEDV------ERSLSLCLGCRACEPVCPSGVKYGQLLEEAR 102 >gi|116619591|ref|YP_821747.1| hypothetical protein Acid_0452 [Candidatus Solibacter usitatus Ellin6076] gi|116222753|gb|ABJ81462.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 433 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 7/93 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L +CV C C +CP+Y P + + R Sbjct: 15 PRQFDLDKCVHCGLCLNACPTYRELGLEMDSPRGRVYQMVQVAAGAPITSSYR------- 67 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C +CP G+ + + + + Sbjct: 68 EHIDLCLACRGCESACPSGVPYGRMVEHARAEI 100 >gi|239906849|ref|YP_002953590.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239796715|dbj|BAH75704.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 482 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L EDR + + C+ C C++ CP P A R + R+ Sbjct: 50 LPEPEDRLRALDVRSCLGCGACASGCPIPGTPGMEGFDPRT---AIRLVAMGRE------ 100 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + C T C+ CP G++ A ++ Sbjct: 101 -AEVIASAFPWVCTTCGRCSHVCPMGIDLPAVFALLR 136 >gi|224826250|ref|ZP_03699352.1| protein of unknown function DUF162 [Lutiella nitroferrum 2002] gi|224601351|gb|EEG07532.1| protein of unknown function DUF162 [Lutiella nitroferrum 2002] Length = 460 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 8/90 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y +S I L SRD + + + C Sbjct: 305 RCIRCGACMNTCPVYRRSSGHSYSYVIPGPIGSTLGPSRDIKKHGSMA--------FACT 356 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T +C+ CP +N + + + D Sbjct: 357 TCGSCSNVCPVKINLHEQLILQRKRAFDAG 386 >gi|284988871|ref|YP_003407425.1| hypothetical protein Gobs_0251 [Geodermatophilus obscurus DSM 43160] gi|284062116|gb|ADB73054.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geodermatophilus obscurus DSM 43160] Length = 434 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP+Y + D P + R L E L + Sbjct: 23 FPPELLDRCISCGFCLPACPTYALSKDEKSSPRGRITLMRALETGVLEDDD---PTLREE 79 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+ + + + + Sbjct: 80 SSF--CLGCRACEPVCPAGVQYGELLERWR 107 >gi|254431433|ref|ZP_05045136.1| Fe-S oxidoreductase [Cyanobium sp. PCC 7001] gi|197625886|gb|EDY38445.1| Fe-S oxidoreductase [Cyanobium sp. PCC 7001] Length = 456 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 6/84 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C SC SY P + A + + E + C Sbjct: 23 DPCVHCGFCLPSCASYRVLGTEMDSPRGRIHALKAIEAGELELDATVARH------FDSC 76 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 + C +CP G+ + I + Sbjct: 77 LGCLACVTACPSGVRYDQLIEATR 100 >gi|145590732|ref|YP_001152734.1| hypothetical protein Pars_0485 [Pyrobaculum arsenaticum DSM 13514] gi|145282500|gb|ABP50082.1| protein of unknown function DUF162 [Pyrobaculum arsenaticum DSM 13514] Length = 382 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 17/96 (17%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C CP Y Y GP ++ + +E L Sbjct: 293 WEALLCIRCGRCHLHCPVYRALGREFGVPPYTGPMGVMWTA--VTRGIEEAGPHALK--- 347 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C NC + CP G++ I ++K L Sbjct: 348 -------CVHAGNCKEVCPMGIDIPGVIHEVKKRYL 376 >gi|270289685|ref|ZP_06195987.1| succinate dehydrogenase iron-sulfur subunit [Chlamydia muridarum Weiss] Length = 145 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCG------PMVLDGLLYIKNKIDPTLTLRRSCREG 83 IYR P G +++ ++L + + + + + ++C E Sbjct: 7 LNIYRGVP---GKQYWESFELELHPGENVISALMEIEKNPINTQGERVDPVVWEQACLEE 63 Query: 84 ICGSCGMNIDGTNTLACVKDMKDI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 +CGSC M ++G AC + + K I + PL +++DL+VD S + + Sbjct: 64 VCGSCAMLVNGVPRQACTVLIHEHMDAKREIKLAPLSKFPLVRDLIVDRSVMFKNLKR 121 >gi|294499615|ref|YP_003563315.1| glycolate oxidase iron-sulfur subunit [Bacillus megaterium QM B1551] gi|294349552|gb|ADE69881.1| glycolate oxidase iron-sulfur subunit [Bacillus megaterium QM B1551] Length = 453 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D +CV C C SCP+Y P + + + + + + D Sbjct: 22 KDAPDEKKWADCVHCGMCLESCPTYEITGQEQHSPRGRVHLIKSVAEGKISVNEQFTDP- 80 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I + + + Sbjct: 81 -----VFSCLDCRACTTACPANVDVGGLIEEARGQI 111 >gi|289192770|ref|YP_003458711.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus sp. FS406-22] gi|288939220|gb|ADC69975.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus sp. FS406-22] Length = 186 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ SCPS + R + R ++ D+ + D ++ C T Sbjct: 36 CYQCGTCTGSCPSGRRTAYR------TRKVLRKVLLGLDD--------VLDSDDIWYCTT 81 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+ + + I ++ M + Sbjct: 82 CYTCYERCPRDVKITEIIKTLRNMAAKKG 110 >gi|294501898|ref|YP_003565598.1| ferredoxin, 4Fe-4S [Bacillus megaterium QM B1551] gi|294351835|gb|ADE72164.1| ferredoxin, 4Fe-4S [Bacillus megaterium QM B1551] Length = 703 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 66/243 (27%), Gaps = 55/243 (22%) Query: 61 DGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL---- 116 + + I + +P L E I S + G N +A + I + L Sbjct: 164 NAMSIIWHNHEPAL------TEPIASSIAILFKGINDVAAISIFYVSWW-IHLAVLLTFL 216 Query: 117 ---PHMSVIKDLVVDMSHFYSQH----RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 P L + F+++ + + + + + + ++ LY Sbjct: 217 VYVPQSKHAHLLAGPANVFFNRVSKPGKLEKIDFEDETQETFGVGKIEEFTQHQLIDLYA 276 Query: 170 CVMCACCSTSCPSY-------------------------------WWNSDRYLGPAILLQ 198 CV C C+ CP+ W + + Sbjct: 277 CVECGRCTNMCPATGTGKILSPMDLILKMRDHLTEKGAVVTSKAPWVPTYAFSKTKGNQL 336 Query: 199 AYRWLIDSRDEFQG------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A +E + ++ ++ C T NC CP I ++ Sbjct: 337 AMMAASQGGEEAAATAEYNPALIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRR 396 Query: 253 MLL 255 L+ Sbjct: 397 FLV 399 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKILSPMDLILKMRDHLTEKG 313 >gi|289672495|ref|ZP_06493385.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. syringae FF5] Length = 282 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 27 VNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 70 >gi|288554428|ref|YP_003426363.1| 4Fe-4S reductase protein subunit [Bacillus pseudofirmus OF4] gi|288545588|gb|ADC49471.1| 4Fe-4S reductase protein subunit [Bacillus pseudofirmus OF4] Length = 700 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 43/162 (26%), Gaps = 33/162 (20%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----- 181 V M + R + S + + +++ LY CV C C+ CP Sbjct: 234 VFMGRTHKVGRLSSINFEDESQEQFGNNKIEDFNHKQLLDLYACVECGRCTNMCPATGTG 293 Query: 182 --------------------------SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER- 214 S W + A + + + Sbjct: 294 KMLSPMDLIVKMRDHLTEKGAAVTSKSAWLPEFAFSNTKANQLAMQGAGGAEAAAGYDVS 353 Query: 215 -LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ++ ++ C T NC CP I ++ L+ Sbjct: 354 LIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDMRRYLV 395 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLIVKMRDHLTEKG 313 >gi|170748897|ref|YP_001755157.1| hypothetical protein Mrad2831_2479 [Methylobacterium radiotolerans JCM 2831] gi|170655419|gb|ACB24474.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacterium radiotolerans JCM 2831] Length = 631 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW---------NSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C T+CP++ D G + AY Sbjct: 234 WNRLLSYDACVSCGRCETACPAFAAGQPLNPKRLIQDLVAGLSPAEPAYAGAPYPGGREA 293 Query: 212 G------ERL---DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 RL D P L+ C T C + CP + A+ ++ L+R Sbjct: 294 AGGRGPLARLIGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVALRRHETLERG 350 Score = 35.1 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 40/154 (25%), Gaps = 14/154 (9%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 T R C SC G AC PL +I+DLV +S Sbjct: 230 ADFTWNRLLSYDACVSC-----GRCETACPAFAAGQ-------PLNPKRLIQDLVAGLSP 277 Query: 132 FYSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + L + R D L+ C C C CP + D Sbjct: 278 AEPAYAGAPYPGGREAAGGRGPLARLIGPDARIHPDTLWSCTTCRACVEECPMMIEHVDA 337 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + R + + L DP Sbjct: 338 VVALRRHETLERGALPEKAIAPVTELRQAGDPGG 371 >gi|325108549|ref|YP_004269617.1| lactate utilization protein B/C [Planctomyces brasiliensis DSM 5305] gi|324968817|gb|ADY59595.1| Lactate utilization protein B/C [Planctomyces brasiliensis DSM 5305] Length = 457 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C +CP Y + + L SRD + L + C Sbjct: 303 KCIRCGACMNTCPVYRRSGGHSYHSTVPGPIGSILAPSRDPKKYSSLPHA--------CS 354 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +CT+ CP ++ + + L + + Sbjct: 355 LCGSCTEVCPVKIDLHHQLYTWRNKLALKGL 385 >gi|323488535|ref|ZP_08093779.1| glycolate oxidase iron-sulfur subunit [Planococcus donghaensis MPA1U2] gi|323397752|gb|EGA90554.1| glycolate oxidase iron-sulfur subunit [Planococcus donghaensis MPA1U2] Length = 440 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW-NSDRYLGPAILLQAYRWLIDS 206 + + + QS ++ + L +C+ C C +CP+Y N D P + + + D Sbjct: 4 TELQQRMQQSFKENVDEEYLMDCMRCGFCLPACPTYLVTNKDETHSPRGRIALMKGMRDG 63 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C +CP G+ I + + Sbjct: 64 DVVWDSSV------EESFDMCLGCRACEPACPAGVQYGVLIEETR 102 >gi|52078782|ref|YP_077573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacillus licheniformis ATCC 14580] gi|52784152|ref|YP_089981.1| YsfD [Bacillus licheniformis ATCC 14580] gi|319648925|ref|ZP_08003134.1| YsfD protein [Bacillus sp. BT1B_CT2] gi|52001993|gb|AAU21935.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Bacillus licheniformis ATCC 14580] gi|52346654|gb|AAU39288.1| YsfD [Bacillus licheniformis ATCC 14580] gi|317388919|gb|EFV69737.1| YsfD protein [Bacillus sp. BT1B_CT2] Length = 440 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGER 214 Q + R + L C+ C C SCP+Y + P + + ++D E + Sbjct: 12 QQFKQRMDEEELLNCMRCGFCLPSCPTYIESGFQESHSPRGRIALMKAVVDGTIEPDEDV 71 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+N + + + + ++ K Sbjct: 72 ------ERSLELCLGCRACEPVCPSGVNYGRLLEEARDIIQQNK 109 >gi|218780823|ref|YP_002432141.1| hypothetical protein Dalk_2983 [Desulfatibacillum alkenivorans AK-01] gi|218762207|gb|ACL04673.1| Putative lactate dehydrogenase, LdhB [Desulfatibacillum alkenivorans AK-01] Length = 409 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S + + + +C CA C +CP + + P + + + ++ + +RL Sbjct: 1 MSFDLHDFEEMMAKCSHCAFCQATCPVFLQDLLETHMPRARMTLAKACLMDQEVPRTKRL 60 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + D RC NC ++CP G+ + + L K Sbjct: 61 EKIMD-----RCLLCGNCERTCPAGVKVNDVVVAARKDLYKGK 98 >gi|296167792|ref|ZP_06849979.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897048|gb|EFG76667.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 790 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + DP L+ C T C + CP + I ++ + Sbjct: 394 VIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQV 431 Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 10/119 (8%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P + K L + +P P A+ ED Sbjct: 230 HSKHLHIFTAPINVIFKRLPDGLGPLLPIEADGKPIDFENPPDDAEFGRGKIEDFSWKAM 289 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C C C + CP+ WN+ + L P ++ ++D RD + + L D Sbjct: 290 LDFATCTECGRCQSQCPA--WNTGKPLSPKLV------IMDLRDHWMAKAPYILGDKES 340 >gi|319649846|ref|ZP_08003997.1| glycolate oxidase [Bacillus sp. 2_A_57_CT2] gi|317398426|gb|EFV79113.1| glycolate oxidase [Bacillus sp. 2_A_57_CT2] Length = 443 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K + + ++R D L C+ C C SCP+Y + P + + + Sbjct: 1 MTTLKEQIIIQEEFKNRMNEDELLNCMRCGFCLPSCPTYVESGFKETHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D E + L C C CP G+ + + + ++ K Sbjct: 61 ADGLIEPDEDV------ERSLDLCLGCRACEPVCPSGVKYGHLLEEARDIINQNK 109 >gi|282165440|ref|YP_003357825.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] gi|282157754|dbj|BAI62842.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] Length = 182 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 13/101 (12%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ + + C C C+ CP L +++ + Sbjct: 18 THEVEKGGGENISVCYQCGTCTAGCP---MGRRNALRTRKIMRMTALGL----------K 64 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D L ++ C T CT CP+ + P I ++ M Sbjct: 65 DELMKSDEIWYCSTCYTCTDRCPRHVKPTDVILALRNMATK 105 >gi|257482959|ref|ZP_05637000.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 376 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 35 VNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 78 >gi|215402084|ref|ZP_03414265.1| ferredoxin, 4Fe-4S [Mycobacterium tuberculosis 02_1987] gi|289744033|ref|ZP_06503411.1| hypothetical protein TBBG_03379 [Mycobacterium tuberculosis 02_1987] gi|289684561|gb|EFD52049.1| hypothetical protein TBBG_03379 [Mycobacterium tuberculosis 02_1987] Length = 395 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R E + DP L+ C T C + CP + I ++ + Sbjct: 44 TRPLVGTEEQGGVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQV 93 >gi|86144910|ref|ZP_01063242.1| Fe-S oxidoreductase [Vibrio sp. MED222] gi|85837809|gb|EAQ55921.1| Fe-S oxidoreductase [Vibrio sp. MED222] Length = 951 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R +E + L+ + + Sbjct: 550 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGEEMEASELEKTFEYQGI 605 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N I K++ Sbjct: 606 DTCAATGLCAERCPVGINTGDLIKKLR 632 >gi|20093409|ref|NP_619484.1| iron-sulfur binding reductase [Methanosarcina acetivorans C2A] gi|19918780|gb|AAM07964.1| iron-sulfur binding reductase [Methanosarcina acetivorans C2A] Length = 386 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y+CV C C + CP + + + L++ R + L +L C Sbjct: 41 YKCVQCGTCRSVCPVFDVVGWESANTRGRMLIIKSLLEGRP-PSEDVLPSLA------SC 93 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 T C CP G NP + + + L+ Sbjct: 94 TTCGICAAKCPAGANPPEVVEAARAQLVK 122 >gi|313673672|ref|YP_004051783.1| hypothetical protein Calni_1714 [Calditerrivibrio nitroreducens DSM 19672] gi|312940428|gb|ADR19620.1| protein of unknown function DUF162 [Calditerrivibrio nitroreducens DSM 19672] Length = 706 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYEC 170 + LP + + + ++ Q+ S + D + +C Sbjct: 248 IKLLPKAATGQTISTYLTWIKGQNSSHKNPQGIKETHFLFLDNGRLDFFDHPILKEALKC 307 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPFRLYRCHT 229 + C C+ CP+Y G + L DE L L C Sbjct: 308 IRCGSCANICPAYEMVGGHTFGHIYIGAIGSILTRMYHDEKTAHELLKL--------CIG 359 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 C++ CP G++ I+++ Sbjct: 360 CKACSKFCPAGIDLQSIISELN 381 >gi|91787085|ref|YP_548037.1| hypothetical protein Bpro_1188 [Polaromonas sp. JS666] gi|91696310|gb|ABE43139.1| protein of unknown function DUF224, cysteine-rich region [Polaromonas sp. JS666] Length = 457 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 13/112 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF--------- 210 DR L CV C CS +C Y D P L R + +R+ Sbjct: 44 DRGLALDLEACVNCGYCSEACHFYQSTQDPKYTPTRKLDLLRRV-HARESSAFAPIVRWF 102 Query: 211 -QGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L++L++ L C C+ CP G+N A+ + ++ L + + Sbjct: 103 TRDISLEDLQEWQELVYDSCAECGRCSMVCPMGINIARGVNVMREALSEAGL 154 >gi|51892130|ref|YP_074821.1| glycolate oxidase subunit [Symbiobacterium thermophilum IAM 14863] gi|51855819|dbj|BAD39977.1| glycolate oxidase subunit [Symbiobacterium thermophilum IAM 14863] Length = 428 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 7/86 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y + P + R +++ + LD L+ L C Sbjct: 12 NCMRCGFCLPACPTYRYKQVESASPRGRIALMRAVMEGK-------LDVLDIAGPLDTCL 64 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C +CP G+ + + + L Sbjct: 65 GCRACEPACPAGVTYGAILEQGRAQL 90 >gi|283851025|ref|ZP_06368310.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. FW1012B] gi|283573671|gb|EFC21646.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. FW1012B] Length = 395 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 EC++C C ++CP + L P R + + R + + D L C Sbjct: 19 ECILCGRCLSACPLFAATGREELSPRAKFFLARAVAEGRADLSKKAADLLATV-----CL 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 + C +CP GL +A+++ Sbjct: 74 SCGKCENACPLGLCGPDLVAELR 96 >gi|238028024|ref|YP_002912255.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] gi|237877218|gb|ACR29551.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] Length = 473 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L S D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYTGLEGSLDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + +++ ++R++ Sbjct: 361 -----------TLCGECDSVCPVGIPLSGLLRRLREKQVERRL 392 >gi|257386996|ref|YP_003176769.1| hypothetical protein Hmuk_0933 [Halomicrobium mukohataei DSM 12286] gi|257169303|gb|ACV47062.1| protein of unknown function DUF224 cysteine-rich region domain protein [Halomicrobium mukohataei DSM 12286] Length = 695 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 8/144 (5%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 ++ ++ + + + SP+ +++ C C CS+ Sbjct: 253 FHMLSSFANVVTRDEKAGKRLPGVPEDASPEEIGPSEIDDFSWKQLLDQDACTKCGRCSS 312 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL------YRCHTIMN 232 +CP+ S R L P ++ + + RD + + C M Sbjct: 313 ACPAKE--SGRPLDPRDVILDLKQYREERDAGGEAVDIVADGGTSVVDSATMESCMACMA 370 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C +CP + ++ L + Sbjct: 371 CMDACPVEIEHLTHFTEMNRRLTE 394 >gi|307595093|ref|YP_003901410.1| hypothetical protein Vdis_0969 [Vulcanisaeta distributa DSM 14429] gi|307550294|gb|ADN50359.1| protein of unknown function DUF162 [Vulcanisaeta distributa DSM 14429] Length = 388 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 9/104 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL-GPAILLQAYRWLIDSRDEFQGE 213 + + + CV C CS CP+YW R+ P W +R + Sbjct: 289 RRKAAKDPVLWEILLCVRCGRCSMHCPTYWAAGPRFGKPPYTGPMGIPWTAVTRGIMEAG 348 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C NC + CP G++ K I +K L + Sbjct: 349 PAAML--------CTHSGNCREVCPMGIDLPKLILHVKNEYLKQ 384 >gi|254672439|emb|CBA05819.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis alpha275] Length = 438 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 210 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 269 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 270 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 321 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 322 ------CTMCGACVEVCPVRIPITEQMQRLR 346 >gi|224367962|ref|YP_002602125.1| GlcF1 [Desulfobacterium autotrophicum HRM2] gi|223690678|gb|ACN13961.1| GlcF1 [Desulfobacterium autotrophicum HRM2] Length = 443 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 CV C C +CP Y + P LQ D+ L L C Sbjct: 10 NCVKCGLCLATCPVYRVLKEEQASPRARLQLINAFEDNTLGASP-LLKELISK-----CL 63 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +C +CP G+N + ++ ++ Sbjct: 64 MCGSCAVTCPSGINHYEKFMDMRQKMV 90 >gi|148657407|ref|YP_001277612.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Roseiflexus sp. RS-1] gi|148569517|gb|ABQ91662.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Roseiflexus sp. RS-1] Length = 415 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 12/109 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDSRDE 209 + H + L C+ C C+ +CP D + GP + QA R+ D + Sbjct: 1 MTIIPVDHIEHSLEQSLDHCIKCNICTAACPVSAVT-DLFPGPKYVGPQAQRFRHDRQPS 59 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + CP G+ A+ A+ + L+ + Sbjct: 60 P----------DESVDYCSGCRVCNEVCPTGVRIAELNARARARLVAER 98 >gi|254820179|ref|ZP_05225180.1| ferredoxin, 4Fe-4S [Mycobacterium intracellulare ATCC 13950] Length = 991 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R E + DP L+ C + C + CP + I ++ + Sbjct: 378 TRPLVGTEEQGGVIDPDVLWSCVSCGACVEQCPVDIEHVDHIIDMRRYQV 427 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 10/119 (8%) Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + ++ P + K L + +P P A ED Sbjct: 226 HSKHMHIFTAPINVIFKRLPDGLGPLLPLEHDGKPIDFENPPDDATFGRGKVEDFSWKAM 285 Query: 167 --LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C C C + CP+ WN+ + L P ++ ++D RD + + L D Sbjct: 286 LDFATCTECGRCQSQCPA--WNTGKPLSPKLV------IMDLRDHWMAKAPYILGDKES 336 >gi|323494869|ref|ZP_08099961.1| Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546] gi|323310833|gb|EGA64005.1| Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546] Length = 949 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R +E L+ + + + Sbjct: 548 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQQRRALGEETAATELEQIFEYQGI 603 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+N + +++ Sbjct: 604 DTCAATGLCADRCPVGINTGDLVKQLR 630 >gi|84489813|ref|YP_448045.1| HdrC1 [Methanosphaera stadtmanae DSM 3091] gi|37359613|emb|CAE47757.1| heterodisulfide reductase subunit C [Methanosphaera stadtmanae DSM 3091] gi|84373132|gb|ABC57402.1| HdrC1 [Methanosphaera stadtmanae DSM 3091] Length = 186 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 13/98 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L C C CS +CPS Y+ ++ +A L D + Sbjct: 26 ANGSESLAICYQCGTCSGACPSGRRTP--YMIRRLVRKALAGLKD-----------QVIS 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C T C + CP+ + + + I+ + Sbjct: 73 DDAIWMCTTCYECQERCPRDIKIVEIVKAIRNVAAHEG 110 >gi|296447295|ref|ZP_06889223.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylosinus trichosporium OB3b] gi|296255160|gb|EFH02259.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylosinus trichosporium OB3b] Length = 429 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + LL + Q L CV C C+ +CP+Y D P + + +++ Sbjct: 2 QTHFSPRLLADSDMSQSETILRACVHCGFCTATCPTYLLTGDELDSPRGRIYLIKEMLE- 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +R + + RC + ++C +CP ++ + + + Sbjct: 61 -----NDRPADARTVRHVDRCLSCLSCMTTCPSSVHYMHLVDHARAHIEK 105 >gi|294670132|ref|ZP_06735057.1| iron-sulfur cluster-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308059|gb|EFE49302.1| iron-sulfur cluster-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 480 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP + + +++ Sbjct: 368 -----CTMCGACDEVCPVKIPITAQMRRLREEA 395 >gi|120603198|ref|YP_967598.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio vulgaris DP4] gi|120563427|gb|ABM29171.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfovibrio vulgaris DP4] Length = 440 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C++C C CP + L P R + + + L D RC Sbjct: 11 QCLLCGQCLAVCPVFLATGREELSPKAKQHLLRHFRERPEALAEAPVRVLAD-----RCL 65 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 + C +CP L+ A+A+++ Sbjct: 66 SCGRCAVACPHHLSVPDALARLRSR 90 >gi|302037947|ref|YP_003798269.1| FAD/fMN-containing dehydrogenase subunit GlcDF [Candidatus Nitrospira defluvii] gi|300606011|emb|CBK42344.1| FAD/FMN-containing dehydrogenase, putative glycolate oxidase, fused subunits GlcD and GlcF [Candidatus Nitrospira defluvii] Length = 946 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 26/234 (11%), Positives = 61/234 (26%), Gaps = 23/234 (9%) Query: 33 YRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNI 92 YR++P K +D V ++ + + + P + +++ Sbjct: 385 YRFDPRKKPINFVDDVVVPATRISELIRYLETFFEGQHVPVAIFGHIGNGNAHITPLLDV 444 Query: 93 DGTNTLACVKDMKDIKGAIAVYPL-------------PHMSVIKDLVVDMSHFYSQHRSI 139 + + + V K ++ + Q + Sbjct: 445 NDRRDFDKMVQAYHEIHGAVLSRFEGSICGEHGDGRVRAEYVRKMFGDELYQLFVQVKQT 504 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 ++P E C CA C++ CP Y + + Sbjct: 505 LDPANVMNPGIKISETPFTEHIDYQRLSKSCATCAKCNSVCPVYDVFQSEDMSSRGWFEI 564 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L+ + C +C CP G++ ++ I + + Sbjct: 565 ----------VTAKDYSYLDSKRVVEACLNCKSCRTICPAGVDVSELILQRRAE 608 >gi|253701394|ref|YP_003022583.1| hypothetical protein GM21_2791 [Geobacter sp. M21] gi|251776244|gb|ACT18825.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 662 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP++ D+ L P ++ + R + + ++ L Sbjct: 284 WKDIFDTDACTKCKRCQDRCPAHGT--DKPLSPMKVIDQVGEIA--RGKAEDNLVETL-G 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C + CP + + ++ L+ Sbjct: 339 KDAVWSCTTCRACQEICPAAVEHVNKVVDVRRNLV 373 >gi|257054307|ref|YP_003132139.1| Fe-S oxidoreductase [Saccharomonospora viridis DSM 43017] gi|256584179|gb|ACU95312.1| Fe-S oxidoreductase [Saccharomonospora viridis DSM 43017] Length = 428 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 7/93 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C +CP+Y + P + +L+D E L+ + Sbjct: 21 LDDCVHCGFCLPTCPTYQLWGEEMDSPRGRI----YLMD-LAERGEIGLEGAFFQH-IDA 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C M C +CP G+ + + + L +R + Sbjct: 75 CLGCMACVTACPSGVQYDRLLEATRPQL-ERNV 106 >gi|21227392|ref|NP_633314.1| Fe-S oxidoreductase [Methanosarcina mazei Go1] gi|20905754|gb|AAM30986.1| Fe-S oxidoreductase [Methanosarcina mazei Go1] Length = 387 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y+CV C C + CP + + + LI+ R + L +L C Sbjct: 42 YKCVQCGTCRSVCPVFDVVGWESANTRGRMLIIKSLIEGRP-PSEDVLSSLA------SC 94 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 T C CP G NP + + + L+ Sbjct: 95 TTCGICAAKCPAGANPPEVVEAARAQLVK 123 >gi|124514323|gb|EAY55837.1| D-lactate dehydrogenase (Cytochrome) [Leptospirillum rubarum] Length = 945 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 14/124 (11%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + +++ ++P + + + C C C+T CPS+ + Sbjct: 501 MFERTKALFDPGGLLNPGVKISRVSFLDHIDVPRVVQPCATCGKCNTVCPSFDVLRQESM 560 Query: 192 GPAILLQAYRWLIDS--RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 G Y+ L D RD GE LD C +C CP G++ + I + Sbjct: 561 GARGW---YQILTDPVFRDNPPGEVLD---------SCLNCKSCRTVCPAGVDVSSVILE 608 Query: 250 IKMM 253 + Sbjct: 609 ARAR 612 >gi|121635126|ref|YP_975371.1| iron-sulphur protein [Neisseria meningitidis FAM18] gi|120866832|emb|CAM10590.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis FAM18] gi|325132382|gb|EGC55075.1| iron-sulfur cluster binding protein [Neisseria meningitidis M6190] gi|325138437|gb|EGC61003.1| iron-sulfur cluster binding protein [Neisseria meningitidis ES14902] gi|325198571|gb|ADY94027.1| iron-sulfur cluster binding protein [Neisseria meningitidis G2136] Length = 484 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|291545696|emb|CBL18804.1| hypothetical protein CK1_05050 [Ruminococcus sp. SR1/5] Length = 129 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C CS +CPS+ + Q ++I+ E ++ L + L++C Sbjct: 21 KCMKCGKCSATCPSFDEMDIK------PHQFVSYVIN-------ENIEALVNSASLWKCL 67 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP+ + P K I + +++ K Sbjct: 68 SCFACVERCPRDVKPGKIIDGARQLVVREK 97 >gi|88705801|ref|ZP_01103510.1| iron-sulfur cluster binding protein [Congregibacter litoralis KT71] gi|88699872|gb|EAQ96982.1| iron-sulfur cluster binding protein [Congregibacter litoralis KT71] Length = 473 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 11/101 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLE 219 + +C+ C C CP Y + AY W+ L +LE Sbjct: 306 ASDYAEMLQCIRCGACLNHCPVY---------MSAGGHAYGWVYPGPMGSVLTPLLTSLE 356 Query: 220 DPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D L C C + CP + + ++ + + Sbjct: 357 DGGLLPDACTACGRCEEVCPAAIPIPDLLRDLREEKFTQGV 397 >gi|197117850|ref|YP_002138277.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197087210|gb|ACH38481.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 662 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + I C C C CP++ D+ L P ++ + R + + ++ L Sbjct: 284 WKDIFDTDACTKCKRCQDRCPAHGT--DKPLSPMKIIDQVGEIA--RGQAEDNLVETL-G 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C + CP + + ++ L+ Sbjct: 339 KDAVWSCTTCRACQEICPAAVEHVNKVVDVRRNLV 373 >gi|89099296|ref|ZP_01172173.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus sp. NRRL B-14911] gi|89085905|gb|EAR65029.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus sp. NRRL B-14911] Length = 450 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R D + C+ C C SCP+Y + P + + + D E + Sbjct: 17 RMDEDEMLNCMRCGFCLPSCPTYITSGFKEEHSPRGRIALMKAVADGLIEPDSDV----- 71 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+N + + + ++ K Sbjct: 72 -ERSLDLCLGCRACEPVCPSGVNYGHLLEEARDIISQNK 109 >gi|330943167|gb|EGH45583.1| 4Fe-4S ferredoxin [Pseudomonas syringae pv. pisi str. 1704B] Length = 343 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ L D L+ C T C + CP + AI ++ L K Sbjct: 2 VNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEK 45 >gi|218887958|ref|YP_002437279.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758912|gb|ACL09811.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 468 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C++C C+ CP++ L P + L RDE RL RC + Sbjct: 26 CLLCGQCTAVCPAFLTTGQEELSPRAKHLVFAAL---RDEPG--RLGLKPARELADRCLS 80 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMM 253 C CP+GL+ +A+A ++ Sbjct: 81 CGRCAAICPQGLSVPQALAALRAR 104 >gi|327541832|gb|EGF28344.1| iron-sulfur cluster binding protein [Rhodopirellula baltica WH47] Length = 483 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 32/117 (27%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY------------LGPAILLQAYRW 202 D + C+ C C +CP Y + LGPA +A++ Sbjct: 304 RSKIRDSKTFRQSLHCIRCGACMNTCPVYRRSGGHSYRATVPGPIGSVLGPAKNAKAHKS 363 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L + C +CT CP + + + +L+ +++ Sbjct: 364 LP--------------------FACSLCGSCTDVCPVKIPLHHQLLAWRKVLVGKRL 400 >gi|32474928|ref|NP_867922.1| electron transport protein ykgF- 4Fe-4S containing oxidoreductase [Rhodopirellula baltica SH 1] gi|32445468|emb|CAD75469.1| putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase [Rhodopirellula baltica SH 1] Length = 483 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 32/117 (27%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY------------LGPAILLQAYRW 202 D + C+ C C +CP Y + LGPA +A++ Sbjct: 304 RSKIRDSKTFRQSLHCIRCGACMNTCPVYRRSGGHSYRATVPGPIGSVLGPAKNAKAHKS 363 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L + C +CT CP + + + +L+ +++ Sbjct: 364 LP--------------------FACSLCGSCTDVCPVKIPLHHQLLAWRKVLVGKRL 400 >gi|134299631|ref|YP_001113127.1| hypothetical protein Dred_1777 [Desulfotomaculum reducens MI-1] gi|134052331|gb|ABO50302.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfotomaculum reducens MI-1] Length = 678 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 39/200 (19%) Query: 92 IDGTNTLACVKDMKDIKGAIAVYPLPHMSVI-------KDLVVDMSHFYSQHRSIEPWLK 144 +G + V+ L V + ++ F+ + ++ Sbjct: 193 FNGLPKGDLEIGFEVFFWVHVVF-LSGFMVFFRYSPHVHPVFAPLNIFFRTLKPRGGMIE 251 Query: 145 T---VSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + ED Y C C C +CP+Y S ++L P L+ Sbjct: 252 PINFEDESIEQYGVAKLEDFNWKQIMDAYACAECGRCQANCPAY--LSGKHLSPKHLIHK 309 Query: 200 YRWLIDSRDE-------------------FQGERLDN-----LEDPFRLYRCHTIMNCTQ 235 R +D + + E L+ + ++ C +C + Sbjct: 310 LRLHVDEKAKMLGSALGNHSSGLAAEETAASSEALEQNLVPDIFSAEEIWDCTNCASCME 369 Query: 236 SCPKGLNPAKAIAKIKMMLL 255 CP I +++ L+ Sbjct: 370 QCPVLNEHVPKINQMRQNLV 389 >gi|221632189|ref|YP_002521410.1| metabolism heterodisulfide reductase C [Thermomicrobium roseum DSM 5159] gi|221157150|gb|ACM06277.1| metabolism heterodisulfide reductase C [Thermomicrobium roseum DSM 5159] Length = 234 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 12/127 (9%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S +S + + + + + D + D LY C C C ++CPS + Sbjct: 6 WSPTKSGQRYADVPEERKRELFEEVKSDPRYPDFLYGCYECGICVSACPSARFYD---FS 62 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P ++ QA E + L + ++ C +C + CP+G NP + ++ Sbjct: 63 PRVIAQALAR------EDVERFYEILMED--IWNCAQCFSCVR-CPRGNNPGGLVTLMRE 113 Query: 253 MLLDRKI 259 + + + Sbjct: 114 VAVRHGL 120 >gi|188995133|ref|YP_001929385.1| putative electron transport protein [Porphyromonas gingivalis ATCC 33277] gi|188594813|dbj|BAG33788.1| putative electron transport protein [Porphyromonas gingivalis ATCC 33277] Length = 455 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 14/103 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQ 211 + ++ C+ C C +CP Y + Y P + L D R Sbjct: 288 RTDIIENEEHVKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDPR---- 343 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + C ++C+ CP ++ + I + + L Sbjct: 344 --RY-----SDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|75760004|ref|ZP_00740071.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492523|gb|EAO55672.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 442 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAIVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|309812535|ref|ZP_07706283.1| iron-sulfur cluster-binding protein [Dermacoccus sp. Ellin185] gi|308433513|gb|EFP57397.1| iron-sulfur cluster-binding protein [Dermacoccus sp. Ellin185] Length = 546 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 54/176 (30%), Gaps = 16/176 (9%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + ++V+ +L+ S + W + Sbjct: 249 NGRMCLTLPETLISVVGIEKVLPTWDDLAVMLELLPRSSTGERMNPYTSMWTGSSEADGP 308 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRW 202 +++ D + L C+ C+ C CP Y Y Sbjct: 309 QDVHVVLVDNGRTRVLSDTVGREALRCIRCSACLNVCPVYERVGGHAYTSVYPGPIGAIL 368 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R +R L L C++ CP ++ K + +++ ++++K Sbjct: 369 TPQMR-GLDSDRDKALPFASSL-----CGACSEVCPVKIDFPKILVELRTQVVEKK 418 >gi|225871701|ref|YP_002753155.1| iron-sulfur cluster binding protein [Acidobacterium capsulatum ATCC 51196] gi|225793504|gb|ACO33594.1| iron-sulfur cluster binding protein [Acidobacterium capsulatum ATCC 51196] Length = 476 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 63/242 (26%), Gaps = 30/242 (12%) Query: 31 RIYR---WNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 I+R PD +P DL L + G+C Sbjct: 171 EIFRDKMQRPDLGASPQ------DLTEAARQYLREKFLRVKTAIGGANFLIAETGGVCIV 224 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 +G L + + + G V P + V L+ + + W Sbjct: 225 ES-EGNGRMCLTLPETLILMVGVEKVIPRFQDLEVFLQLLPRSATGERMNPYNSIWTGVH 283 Query: 147 SPKPAKELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-WWNSDRYLGPAILL 197 K D + L +C+ C C +CP Y Y Sbjct: 284 DGDGPKNFHVVLIDNGRTGILADEEARQTLQCIRCGACLNACPVYRQTGGHAYGSTYGGP 343 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L N+E L Y C + CP +N + + ++ ++ Sbjct: 344 IGAILTPQ---------LQNMEHAQSLPYASSLCGACYEVCPVKINIPEVLIHLRGRVVR 394 Query: 257 RK 258 + Sbjct: 395 EQ 396 >gi|261400861|ref|ZP_05986986.1| iron-sulfur cluster-binding protein [Neisseria lactamica ATCC 23970] gi|313668550|ref|YP_004048834.1| iron-sulphur protein [Neisseria lactamica ST-640] gi|269209334|gb|EEZ75789.1| iron-sulfur cluster-binding protein [Neisseria lactamica ATCC 23970] gi|313006012|emb|CBN87471.1| conserved hypothetical iron-sulphur protein [Neisseria lactamica 020-06] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|78211711|ref|YP_380490.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. CC9605] gi|78196170|gb|ABB33935.1| putative glycolate oxidase subunit (Fe-S) protein [Synechococcus sp. CC9605] Length = 458 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 CV C C +C SY + P + A R + +F Sbjct: 21 ADPCVHCGFCLPTCASYRVLASEMDSPRGRIHALRAIEAGELDFGATV------ASHFDT 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ + I + Sbjct: 75 CLGCYACVSACPSGVRYDQLIEATR 99 >gi|297531597|ref|YP_003672872.1| hypothetical protein GC56T3_3382 [Geobacillus sp. C56-T3] gi|297254849|gb|ADI28295.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. C56-T3] Length = 698 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 36/153 (23%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + S + ++++ LY CV C C++ CP+ + + L P L Sbjct: 243 KLAPIHFEDESQESFGVGKIEDFTQKQLIDLYACVECGRCTSMCPA--TGTGKMLSPMDL 300 Query: 197 LQAYRWLIDSRDEFQGER----------------------------------LDNLEDPF 222 + R + + R + ++ Sbjct: 301 ILKLRDHLTEKGAVVTSRAPWVPAFAFKHTRGNQLAFAAASEQAATIEMPSLIGDVITEE 360 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP I ++ L+ Sbjct: 361 EIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 393 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|261420802|ref|YP_003254484.1| hypothetical protein GYMC61_3454 [Geobacillus sp. Y412MC61] gi|319768472|ref|YP_004133973.1| hypothetical protein GYMC52_3486 [Geobacillus sp. Y412MC52] gi|261377259|gb|ACX80002.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y412MC61] gi|317113338|gb|ADU95830.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y412MC52] Length = 698 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 36/153 (23%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + S + ++++ LY CV C C++ CP+ + + L P L Sbjct: 243 KLAPIHFEDESQESFGVGKIEDFTQKQLIDLYACVECGRCTSMCPA--TGTGKMLSPMDL 300 Query: 197 LQAYRWLIDSRDEFQGER----------------------------------LDNLEDPF 222 + R + + R + ++ Sbjct: 301 ILKLRDHLTEKGAVVTSRAPWVPAFAFKHTRGNQLAFAAASEQAATIEMPSLIGDVITEE 360 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP I ++ L+ Sbjct: 361 EIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 393 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|15677296|ref|NP_274450.1| hypothetical protein NMB1438 [Neisseria meningitidis MC58] gi|7226679|gb|AAF41799.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|261392301|emb|CAX49827.1| putative ferredoxin-like protein [Neisseria meningitidis 8013] gi|308389542|gb|ADO31862.1| conserved hypothetical iron-sulfur protein [Neisseria meningitidis alpha710] gi|316984564|gb|EFV63529.1| iron-sulfur cluster binding protein [Neisseria meningitidis H44/76] gi|325128504|gb|EGC51382.1| iron-sulfur cluster binding protein [Neisseria meningitidis N1568] gi|325134582|gb|EGC57226.1| iron-sulfur cluster binding protein [Neisseria meningitidis M13399] gi|325140618|gb|EGC63138.1| iron-sulfur cluster binding protein [Neisseria meningitidis CU385] gi|325142637|gb|EGC65028.1| iron-sulfur cluster binding protein [Neisseria meningitidis 961-5945] gi|325144743|gb|EGC67038.1| iron-sulfur cluster binding protein [Neisseria meningitidis M01-240013] gi|325199947|gb|ADY95402.1| iron-sulfur cluster binding protein [Neisseria meningitidis H44/76] gi|325205809|gb|ADZ01262.1| iron-sulfur cluster binding protein [Neisseria meningitidis M04-240196] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|56421933|ref|YP_149251.1| iron-sulfur oxidoreductase [Geobacillus kaustophilus HTA426] gi|56381775|dbj|BAD77683.1| iron-sulfur oxidoreductase [Geobacillus kaustophilus HTA426] Length = 700 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 36/153 (23%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + S + ++++ LY CV C C++ CP+ + + L P L Sbjct: 243 KLAPIHFEDESQESFGVGKIEDFTQKQLIDLYACVECGRCTSMCPA--TGTGKMLSPMDL 300 Query: 197 LQAYRWLIDSRDEFQGER----------------------------------LDNLEDPF 222 + R + + R + ++ Sbjct: 301 ILKLRDHLTEKGAVVTSRTPWVPAFAFKHTRGNQLAFAAASEQAATIEMPSLIGDVITEE 360 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP I ++ L+ Sbjct: 361 EIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 393 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|218768441|ref|YP_002342953.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis Z2491] gi|121052449|emb|CAM08785.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis Z2491] gi|319410685|emb|CBY91064.1| putative ferredoxin-like protein [Neisseria meningitidis WUE 2594] gi|325130521|gb|EGC53276.1| iron-sulfur cluster binding protein [Neisseria meningitidis OX99.30304] gi|325201865|gb|ADY97319.1| iron-sulfur cluster binding protein [Neisseria meningitidis M01-240149] gi|325208383|gb|ADZ03835.1| iron-sulfur cluster binding protein [Neisseria meningitidis NZ-05/33] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|87302016|ref|ZP_01084850.1| Fe-S oxidoreductase [Synechococcus sp. WH 5701] gi|87283584|gb|EAQ75539.1| Fe-S oxidoreductase [Synechococcus sp. WH 5701] Length = 458 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 6/84 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SC SY P + + + +GE + C Sbjct: 20 DPCIHCGFCLPSCASYRVLGSEMDSPRGRIHMLKAI------DRGELSLDATVAGHFDSC 73 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 + C +CP G+ + IA + Sbjct: 74 LGCLACVSACPSGVRYDELIAATR 97 >gi|304387178|ref|ZP_07369421.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] gi|304338745|gb|EFM04856.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|325204424|gb|ADY99877.1| iron-sulfur cluster binding protein [Neisseria meningitidis M01-240355] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|261879243|ref|ZP_06005670.1| iron-sulfur cluster-binding protein [Prevotella bergensis DSM 17361] gi|270334072|gb|EFA44858.1| iron-sulfur cluster-binding protein [Prevotella bergensis DSM 17361] Length = 457 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + ++L + + +C+ C C +CP Y Sbjct: 264 TTTFTSHFRQARPGGKMHVVLLDNGRSDILANEQ----HWQTLKCIRCGACMNTCPVYRR 319 Query: 186 ---NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 S Y P + L D ++ + C ++C + CP L Sbjct: 320 STGPSYTYFIPGPIGINLGMLADP-----------VKYSDNVSACTLCLSCDKVCPVELE 368 Query: 243 PAKAIAKIKMML 254 P I + L Sbjct: 369 PGSQIYYWRQEL 380 >gi|161870306|ref|YP_001599476.1| iron-sulphur protein [Neisseria meningitidis 053442] gi|161595859|gb|ABX73519.1| iron-sulphur protein [Neisseria meningitidis 053442] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|254805218|ref|YP_003083439.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis alpha14] gi|254668760|emb|CBA06642.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis alpha14] gi|254670258|emb|CBA05509.1| conserved hypothetical iron-sulphur protein [Neisseria meningitidis alpha153] gi|325136519|gb|EGC59123.1| iron-sulfur cluster binding protein [Neisseria meningitidis M0579] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|309379694|emb|CBX21683.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|261377740|ref|ZP_05982313.1| iron-sulfur cluster-binding protein [Neisseria cinerea ATCC 14685] gi|269146023|gb|EEZ72441.1| iron-sulfur cluster-binding protein [Neisseria cinerea ATCC 14685] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|30019447|ref|NP_831078.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus cereus ATCC 14579] gi|29894991|gb|AAP08279.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus cereus ATCC 14579] Length = 442 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLCEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEETRDIINQNK 108 >gi|332667336|ref|YP_004450124.1| hypothetical protein Halhy_5426 [Haliscomenobacter hydrossis DSM 1100] gi|332336150|gb|AEE53251.1| protein of unknown function DUF224 cysteine-rich region domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 441 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 24/115 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-------IDSRDEF--- 210 + + Y C C C++ CP+ + L P ++ R +D++D Sbjct: 290 WKNVLDAYSCTECGRCTSVCPANLT--GKKLSPRKIVMDIRDRAEEIGKKLDTKDTQYAK 347 Query: 211 -QGERLDNLEDPFR-----------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + L ++ C T C ++CP +NP + I K++ Sbjct: 348 DKAQPLSAANFEDGKSLFDYISREEIHACTTCNACVEACPVLINPLEPILKLRRY 402 >gi|328554489|gb|AEB24981.1| glycolate oxidase iron-sulfur subunit [Bacillus amyloliquefaciens TA208] gi|328912894|gb|AEB64490.1| glycolate oxidase iron-sulfur subunit [Bacillus amyloliquefaciens LL3] Length = 442 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ + + R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTAKEQKQIQKEFKSRMDEGELLNCMRCGFCLPSCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+N + + + + Sbjct: 61 TDGLIEPDEDV------ERSLSLCLGCRACEPVCPAGVNYGQLLEEAR 102 >gi|296315293|ref|ZP_06865234.1| iron-sulfur cluster-binding protein [Neisseria polysaccharea ATCC 43768] gi|296837792|gb|EFH21730.1| iron-sulfur cluster-binding protein [Neisseria polysaccharea ATCC 43768] Length = 484 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|171184803|ref|YP_001793722.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934015|gb|ACB39276.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 91 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 9/99 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C CP+Y R+ GP L + +S GE ++ Sbjct: 1 MEPRAEATRCVHCGFCEMVCPTYRLYRMRHYGPRGRLHI---IANSDGLLSGEAYRSVMT 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP G+ A+ I K L+ R + Sbjct: 58 ------CLACGACDTQCPAGIKIAEVIRGFKAELVKRAL 90 >gi|220908763|ref|YP_002484074.1| hypothetical protein Cyan7425_3389 [Cyanothece sp. PCC 7425] gi|219865374|gb|ACL45713.1| protein of unknown function DUF224 cysteine-rich region domain protein [Cyanothece sp. PCC 7425] Length = 445 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C ++CPSY P + L + + Sbjct: 19 PDPKLIDACVHCGFCLSTCPSYRVIGQETDSPRGRIYLMDALNSGDIPLSPTTVSH---- 74 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C +CP G+ K IA + Sbjct: 75 --FDSCLGCLACVTTCPSGVEYDKLIAATR 102 >gi|218896327|ref|YP_002444738.1| glycolate oxidase iron-sulfur subunit [Bacillus cereus G9842] gi|218544236|gb|ACK96630.1| glycolate oxidase iron-sulfur subunit [Bacillus cereus G9842] Length = 442 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAIVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|147918953|ref|YP_685327.1| heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] gi|147920866|ref|YP_687321.1| heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] gi|110620723|emb|CAJ36001.1| heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] gi|110622717|emb|CAJ37995.1| heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] Length = 180 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 13/102 (12%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++Q + + C C C+ SCP L +++ + Sbjct: 19 THEVEKQGGENIGVCYQCGTCTGSCPQGR---RNALRTRKIMRMVALGM----------K 65 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D L ++ C T CT CP+ + P I ++ M Sbjct: 66 DQLLRDDSIWYCSTCYTCTDRCPRHVKPTDVIIALRNMATRE 107 >gi|239828627|ref|YP_002951251.1| hypothetical protein GWCH70_3345 [Geobacillus sp. WCH70] gi|239808920|gb|ACS25985.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. WCH70] Length = 699 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 30/124 (24%), Gaps = 34/124 (27%) Query: 166 GLYECVMCACCSTSCPSYWWNSD-----------------------------RYLGPAIL 196 LY CV C C++ CP+ + Sbjct: 272 DLYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKGAAVTSRAPWVPTFAFKNTR 331 Query: 197 LQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + E + ++ ++ C T NC CP I ++ Sbjct: 332 GNQLAFAAQGVQEQAAALEMPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLR 391 Query: 252 MMLL 255 L+ Sbjct: 392 RYLV 395 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|212639854|ref|YP_002316374.1| glycolate oxidase, iron-sulfur subunit FlcF [Anoxybacillus flavithermus WK1] gi|212561334|gb|ACJ34389.1| Glycolate oxidase, iron-sulfur subunit GlcF [Anoxybacillus flavithermus WK1] Length = 447 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGER 214 + + R D L C+ C C +CP+Y + P + + ++D E + Sbjct: 8 KQFQARMNEDELLNCMRCGFCLPTCPTYIESGFQESHSPRGRIALMKAVVDGLIELDEDV 67 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+ + + + ++ K Sbjct: 68 ------ERSLQLCLGCRACEPVCPSGVRYGHLLEEARDIIAQHK 105 >gi|146303337|ref|YP_001190653.1| hypothetical protein Msed_0554 [Metallosphaera sedula DSM 5348] gi|145701587|gb|ABP94729.1| protein of unknown function DUF224, cysteine-rich region domain protein [Metallosphaera sedula DSM 5348] Length = 339 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 15/89 (16%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C +CP+Y P + + R I + C Sbjct: 7 CVHCGFCLEACPTYVVTRSEIHSPRGRITSVRLGI---------------SSEGIETCMF 51 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +CP G+ K I ++ +K Sbjct: 52 CRRCELACPSGVEYGKLIHNVRQENAAKK 80 >gi|73668487|ref|YP_304502.1| iron-sulfur binding reductase [Methanosarcina barkeri str. Fusaro] gi|72395649|gb|AAZ69922.1| iron-sulfur binding reductase [Methanosarcina barkeri str. Fusaro] Length = 388 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y CV C C + CP + + + L++ R + L +L C Sbjct: 43 YRCVQCGTCRSVCPVFDVVGWESANTRGRMLIIKSLLEGRP-PSEDMLPSLA------SC 95 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 T C CP G+ P K + + L+ Sbjct: 96 TTCGICAVKCPAGVKPPKVVEAARAQLVK 124 >gi|254425188|ref|ZP_05038906.1| Cysteine-rich domain protein [Synechococcus sp. PCC 7335] gi|196192677|gb|EDX87641.1| Cysteine-rich domain protein [Synechococcus sp. PCC 7335] Length = 461 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + CV C C +CPSY P + + + + Sbjct: 42 IDACVHCGFCLPTCPSYRVIGKENDSPRGRIYLMDAINKGEAPLSPASVQH------FDT 95 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C + CT +CP G+ K I+ ++ Sbjct: 96 CLGCLACTTACPSGVQYDKLISSVR 120 >gi|325958731|ref|YP_004290197.1| Lactate utilization protein B/C [Methanobacterium sp. AL-21] gi|325330163|gb|ADZ09225.1| Lactate utilization protein B/C [Methanobacterium sp. AL-21] Length = 400 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 18/92 (19%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF------R 223 C+ C C +CP Y + + YR + R G L + D Sbjct: 298 CIGCGSCIVTCPIYNVVGNDF--------GYRRHLGGR----GVVLSSFIDDEKTCKDSG 345 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 LY C CT CP G+ ++ I K++ + Sbjct: 346 LYLCTMCGQCTYECPVGVKTSELIKKLRNDAV 377 >gi|295705008|ref|YP_003598083.1| glycolate oxidase iron-sulfur subunit [Bacillus megaterium DSM 319] gi|294802667|gb|ADF39733.1| glycolate oxidase iron-sulfur subunit [Bacillus megaterium DSM 319] Length = 453 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D +CV C C SCP+Y P + + + + + + D Sbjct: 22 KDAPDEKKWADCVHCGMCLESCPTYEITGQEQHSPRGRVHLIKSVAEGKISVNEQFTDP- 80 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I + + + Sbjct: 81 -----VFACLDCRACTTACPANVDVGGLIEEARGQI 111 >gi|225075334|ref|ZP_03718533.1| hypothetical protein NEIFLAOT_00337 [Neisseria flavescens NRL30031/H210] gi|224953509|gb|EEG34718.1| hypothetical protein NEIFLAOT_00337 [Neisseria flavescens NRL30031/H210] Length = 483 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 21/104 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSR 207 ++ +C+ C C CP Y Y GP + L +R Sbjct: 303 RSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATR 362 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C C + CP + + + +++ Sbjct: 363 DLPTA--------------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|218677140|ref|YP_002395959.1| Fe-S oxidoreductase [Vibrio splendidus LGP32] gi|218325408|emb|CAV27521.1| Fe-S oxidoreductase [Vibrio splendidus LGP32] Length = 951 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R +E + L+ + + Sbjct: 550 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGEEIEASELEKTFEYQGI 605 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N I K++ Sbjct: 606 DTCAATGLCAERCPVGINTGDLIKKLR 632 >gi|222478936|ref|YP_002565173.1| protein of unknown function DUF224 cysteine-rich region domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222451838|gb|ACM56103.1| protein of unknown function DUF224 cysteine-rich region domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 724 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 30/161 (18%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPS 182 ++ ++ ++ + L V +S +D + + C C C+ +CP+ Sbjct: 251 MISSFANVVARDENAGARLPNVPADLDHTNAESLDDFTWKELMDGDACTKCGRCTDACPA 310 Query: 183 YWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDN---------------------- 217 + L P ++ +AYR + S D G R + Sbjct: 311 DTVGRN--LDPRDVILDLKAYRESV-SDDPVAGRRDEMATDGGVASAGGGTVPIVADEGG 367 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D + C + M C +CP + + K+ L+D Sbjct: 368 VIDSESMESCMSCMACMDACPVDIEHLTSFTKMNRQLVDEG 408 >gi|84386755|ref|ZP_00989780.1| Fe-S oxidoreductase [Vibrio splendidus 12B01] gi|84378283|gb|EAP95141.1| Fe-S oxidoreductase [Vibrio splendidus 12B01] Length = 951 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R +E + L+ + + Sbjct: 550 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGEEIEASELEKTFEYQGI 605 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N I K++ Sbjct: 606 DTCAATGLCAERCPVGINTGDLIKKLR 632 >gi|163939202|ref|YP_001644086.1| hypothetical protein BcerKBAB4_1211 [Bacillus weihenstephanensis KBAB4] gi|163861399|gb|ABY42458.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus weihenstephanensis KBAB4] Length = 442 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + D L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVEDTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|228951775|ref|ZP_04113874.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807897|gb|EEM54417.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 439 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++R D L C+ C C +CP+Y P + + ++D E + Sbjct: 8 KEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDV 67 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D L C C CP G+N + + + ++ K Sbjct: 68 EDTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 105 >gi|308174566|ref|YP_003921271.1| glycolate oxidase iron-sulfur subunit [Bacillus amyloliquefaciens DSM 7] gi|307607430|emb|CBI43801.1| glycolate oxidase iron-sulfur subunit [Bacillus amyloliquefaciens DSM 7] Length = 442 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K K++ + + R L C+ C C SCP+Y + P + + + Sbjct: 1 MTTAKEQKQIQKEFKSRMDEGELLNCMRCGFCLPSCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E + L C C CP G+N + + + + Sbjct: 61 TDGLIEPDEDV------ERSLSLCLGCRACEPVCPAGVNYGQLLEEAR 102 >gi|152977889|ref|YP_001343518.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus succinogenes 130Z] gi|150839612|gb|ABR73583.1| protein of unknown function DUF224 cysteine-rich region domain protein [Actinobacillus succinogenes 130Z] Length = 425 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + + +C+ C C+ CP N Y GP S + + RL Sbjct: 17 PVMQHTHTDESFEQCLKCTACTAVCPVTKVNP-FYPGPK----------QSGPDGERLRL 65 Query: 216 DNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + L C C +CP + I + + LDR+ Sbjct: 66 KSADFYDEALKYCLNCKRCEVACPSDVKIGDIIVRARNKYLDRQ 109 >gi|299135545|ref|ZP_07028729.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidobacterium sp. MP5ACTX8] gi|298601669|gb|EFI57823.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidobacterium sp. MP5ACTX8] Length = 646 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 50/174 (28%), Gaps = 18/174 (10%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A A+ ++ LP + K L + +S + E L + Sbjct: 195 AVQLLWWTHTLALLIF-LPLIPHTKHLHLVLSPLTVFLKRGEFSQIPKLEGDEDFGLVAG 253 Query: 159 ED--RQKIDGLYECVMCACCSTSCPSYWWNS-----------DRYLGPAILLQAYRWLID 205 +D + Y CV C C+ CP+ YL L + Sbjct: 254 KDLTQIISLQAYSCVECGRCTEHCPASTTGKVLNPKEIVLGVRSYLNTFGPASETPLLNE 313 Query: 206 SRDEFQGER----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R+E + N + C T C CP G+ + ++ + Sbjct: 314 MREESANTSPDNPVANYLSMEAAFECTTCGACEYQCPVGVEHLPIMVGLRRGAV 367 >gi|260777704|ref|ZP_05886597.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio coralliilyticus ATCC BAA-450] gi|260605717|gb|EEX32002.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio coralliilyticus ATCC BAA-450] Length = 409 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + ++ C+ C C+ CP N Y GP S + + R+ Sbjct: 5 FADHAPQVTSFDHCIKCTVCTVYCPVAKANP-LYPGPK----------QSGPDGERLRIK 53 Query: 217 NLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 N + L C C +CP G+N IA + + + Sbjct: 54 NADYYDEALKLCTNCKRCETACPSGVNIGDIIAVARGKYAKKTL 97 >gi|34540894|ref|NP_905373.1| iron-sulfur cluster binding protein [Porphyromonas gingivalis W83] gi|34397209|gb|AAQ66272.1| iron-sulfur cluster binding protein, putative [Porphyromonas gingivalis W83] Length = 428 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 14/103 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQ 211 + ++ C+ C C +CP Y + Y P + L D R Sbjct: 261 RTDIIENEEHVKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDPR---- 316 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + C ++C+ CP ++ + I + + L Sbjct: 317 --RY-----SDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDL 352 >gi|255065631|ref|ZP_05317486.1| iron-sulfur cluster-binding protein [Neisseria sicca ATCC 29256] gi|255049949|gb|EET45413.1| iron-sulfur cluster-binding protein [Neisseria sicca ATCC 29256] Length = 484 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 26/151 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + PL + + +++ +++ + P+ ++ Sbjct: 256 IPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRT 315 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP Y Y GP + L +RD Sbjct: 316 LQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA-------- 367 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 ------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|33864202|ref|NP_895762.1| Fe-S oxidoreductase [Prochlorococcus marinus str. MIT 9313] gi|33635786|emb|CAE22111.1| Fe-S oxidoreductase [Prochlorococcus marinus str. MIT 9313] Length = 481 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 6/92 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C +C SY P + + + + E C Sbjct: 24 DPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIDNGELELDATV------ASHFDSC 77 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G+ + I + +L ++ Sbjct: 78 LGCFACVSACPSGVRYDQLIEATRPLLNQAEL 109 >gi|46579239|ref|YP_010047.1| glycolate oxidase, iron-sulfur subunit [Desulfovibrio vulgaris str. Hildenborough] gi|46448653|gb|AAS95306.1| glycolate oxidase, iron-sulfur subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311233068|gb|ADP85922.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio vulgaris RCH1] Length = 440 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C++C C CP + L P R + + + L D RC Sbjct: 11 QCLLCGQCLAVCPVFLATGREELSPKAKQHLLRHFRERPEALAEAPVRVLAD-----RCL 65 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 + C +CP L+ A+A+++ Sbjct: 66 SCGRCAVACPHHLSVPDALARLR 88 >gi|315605730|ref|ZP_07880762.1| possible Fe-S dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312428|gb|EFU60513.1| possible Fe-S dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] Length = 821 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 39/145 (26%), Gaps = 52/145 (35%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------RDEFQGE 213 + LY C C C CP+ WN+ + L P +L+ R ++S E G+ Sbjct: 346 WKARLDLYACTECGRCQELCPA--WNTGKPLSPKLLVMGLRDHMESASSIEIVEREEAGQ 403 Query: 214 RLDN-------------------------------------------LEDPFRLYRCHTI 230 LD + L+ C Sbjct: 404 HLDEGEVLLDKGVPASPHSFDLVSALSLSGATGAEGVSPVTAPLVPGVVSEEVLWDCTNC 463 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLL 255 C CP + I ++ + Sbjct: 464 GACVDQCPVDIEHIDHILDLRRHQV 488 >gi|304406437|ref|ZP_07388093.1| protein of unknown function DUF224 cysteine-rich region domain protein [Paenibacillus curdlanolyticus YK9] gi|304344495|gb|EFM10333.1| protein of unknown function DUF224 cysteine-rich region domain protein [Paenibacillus curdlanolyticus YK9] Length = 758 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 15/38 (39%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L+ C T NC CP G I ++ L+ Sbjct: 420 VMTEAELWSCTTCRNCEDQCPVGNEHVDKIIDMRRHLV 457 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R L D LY C CT CP K L+P I K++ L ++ Sbjct: 294 RRKQLLD---LYACVECGRCTNVCPASNTGKLLSPMHLIVKLRDHLTEKG 340 >gi|295400650|ref|ZP_06810627.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977231|gb|EFG52832.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 699 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 29/124 (23%), Gaps = 34/124 (27%) Query: 166 GLYECVMCACCSTSCPSYWWNSD-----------------------------RYLGPAIL 196 LY CV C C++ CP+ + Sbjct: 272 DLYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKGAAITSRAPWVPAFAFKHTR 331 Query: 197 LQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + ++ ++ C T NC CP I ++ Sbjct: 332 GNQLALAAQGVQEQAAALEMPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLR 391 Query: 252 MMLL 255 L+ Sbjct: 392 RYLV 395 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|283781153|ref|YP_003371908.1| hypothetical protein Psta_3384 [Pirellula staleyi DSM 6068] gi|283439606|gb|ADB18048.1| protein of unknown function DUF162 [Pirellula staleyi DSM 6068] Length = 464 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 8/95 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y + + L +RD + + L Sbjct: 295 HRRSLNCIRCGACMNTCPVYRRSGGFSYESTVPGPIGSILSPARDPKEHKSLP------- 347 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP ++ + ++ + + Sbjct: 348 -FACTLCGSCTDVCPVKIDLHHQLLTLRSEIAHKG 381 >gi|312112660|ref|YP_003990976.1| hypothetical protein GY4MC1_3740 [Geobacillus sp. Y4.1MC1] gi|311217761|gb|ADP76365.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y4.1MC1] Length = 699 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 29/124 (23%), Gaps = 34/124 (27%) Query: 166 GLYECVMCACCSTSCPSYWWNSD-----------------------------RYLGPAIL 196 LY CV C C++ CP+ + Sbjct: 272 DLYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKGAAITSRAPWVPAFAFKHTR 331 Query: 197 LQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + ++ ++ C T NC CP I ++ Sbjct: 332 GNQLALAAQGVQEQAAALEMPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLR 391 Query: 252 MMLL 255 L+ Sbjct: 392 RYLV 395 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|296137386|ref|YP_003644628.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295797508|gb|ADG32298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 450 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 15/118 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------- 201 + DR L CV C C+ +C N D L P L R Sbjct: 39 MLEKMDRNLAVDLESCVRCGYCADACQFSVQNDDPDLIPTHKLDLLRRVWRREVAPLSWL 98 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W +RD + + C C+ CP G+N A+ + ++ L + Sbjct: 99 WKPFTRDVNVDDLREW--QALCFDSCTECGRCSMVCPMGINIARGVNVMREALAAAGL 154 >gi|254481866|ref|ZP_05095109.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] gi|214037995|gb|EEB78659.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] Length = 472 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 29/100 (29%), Gaps = 9/100 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C+ C C CP + G L L +LE Sbjct: 303 ASDYKEMLQCIRCGTCLNHCPVFAATGGHSYGWVYSGPMGSIL--------TPLLTSLET 354 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C + C + CP + + ++ +K+ Sbjct: 355 SEALPNACTSCGRCGEVCPADIPLPDLLRDLRHEQYQQKM 394 >gi|77920356|ref|YP_358171.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380] gi|77546439|gb|ABA90001.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380] Length = 423 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 6/105 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + E L ECV C C CP + + + + L+D + + Sbjct: 1 MSKHQEIEAYRQQLRECVKCGTCRAHCPVFKEVQSEAVVARGKISLAQALLDGKIDLDRH 60 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L ++ C C + CP + + I ++ + K Sbjct: 61 LLSDISQ------CLACGRCVKDCPNQVPTDEIILALRRRIGREK 99 >gi|329120042|ref|ZP_08248712.1| iron-sulfur cluster binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327463573|gb|EGF09891.1| iron-sulfur cluster binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 481 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 27/175 (15%) Query: 96 NTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-- 152 + ++ + + + PL + + +++ +++ + P+ Sbjct: 238 PVHIAITGIEKVVAKLTDIPPLYSLLPRSAIGQNITTYFNMITGPRRSGELDGPQEMHLV 297 Query: 153 ---ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRW 202 Q++ +C+ C C CP Y Y GP + Sbjct: 298 LLDNGRSQAYAEQQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIVSPHLLG 357 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L +RD C C + CP + + +++ Sbjct: 358 LDATRDLPTA--------------CTMCGACDEVCPVRIPITAQMRRLREEAQRA 398 >gi|253573777|ref|ZP_04851120.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251847305|gb|EES75310.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 121 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 5/113 (4%) Query: 19 NAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 G + R + ++ + ++ Y V + G +LD + +I+ +DP+ ++R Sbjct: 13 KGEKGTMATVTLNVVRGDAESGAS--LEKYEVPFRD-GMSLLDAIFWIREHVDPSFSVRY 69 Query: 79 SCRE-GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 SCR C C +DG C + + PL IKDL + Sbjct: 70 SCRSANACKECSAFVDGKPGYLCSIR-AVPGSEVKIEPLTGRPWIKDLATALE 121 >gi|294341680|emb|CAZ90099.1| putative Fe-S oxidoreductase [Thiomonas sp. 3As] Length = 450 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 15/118 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------- 201 + DR L CV C C+ +C N D L P L R Sbjct: 39 MLEKMDRNLAVDLESCVRCGYCADACQFSVQNDDPDLIPTHKLDLLRRVWRREVAPLSWL 98 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W +RD + + C C+ CP G+N A+ + ++ L + Sbjct: 99 WKPFTRDVNVDDLREW--QALCFDSCTECGRCSMVCPMGINIARGVNVMREALAAAGL 154 >gi|241758780|ref|ZP_04756893.1| iron-sulfur cluster-binding protein [Neisseria flavescens SK114] gi|241320988|gb|EER57201.1| iron-sulfur cluster-binding protein [Neisseria flavescens SK114] Length = 483 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 21/104 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSR 207 ++ +C+ C C CP Y Y GP + L +R Sbjct: 303 RSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATR 362 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C C + CP + + + +++ Sbjct: 363 DLPTA--------------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|224369921|ref|YP_002604085.1| HdrD3 [Desulfobacterium autotrophicum HRM2] gi|223692638|gb|ACN15921.1| HdrD3 [Desulfobacterium autotrophicum HRM2] Length = 716 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C+ CP Y +G + + RD+ + + Sbjct: 313 RCVRCGACANVCPVYRMVGGHQMGHIYIGAIGLIMTYFFHGRDKAKNL----------VQ 362 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ I ++ +LD Sbjct: 363 NCINCGACKSVCAAGIDLPGLIKEVHARILDE 394 >gi|302342217|ref|YP_003806746.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638830|gb|ADK84152.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 557 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 +S F +++ + + K + D +C C C+ SCP +++ Sbjct: 426 VSTFVVARQAVSGLGRPGKGQAVKLARPEKSLVFQADKFRKCFECQTCTNSCPVVAAHAE 485 Query: 189 --RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + L + + D G R++ Y C T C + CP+G+ Sbjct: 486 PIKSLDLVPHQIMHALAMGMVDLAMGARMN--------YDCLTCYRCQEQCPQGVPITDI 537 Query: 247 IAKIKMMLLDR 257 + ++K M R Sbjct: 538 LYELKNMGYQR 548 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 6/97 (6%) Query: 166 GLYECVMCACCSTSCP---SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C C C+ C S+ + + P+ L A+R L+ D +L L D Sbjct: 332 DLDACTHCGTCTLHCSVLASFQTMGNDGILPSEKLAAFRSLVAG-DRLTDAQLFALRDAN 390 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CT CP G+N + L R + Sbjct: 391 DI--CTRCHRCTDLCPVGINLQGLWTALSQELEHRGV 425 >gi|15616364|ref|NP_244669.1| iron-sulphur-binding reductase [Bacillus halodurans C-125] gi|10176427|dbj|BAB07521.1| iron-sulphur-binding reductase [Bacillus halodurans C-125] Length = 700 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 38/145 (26%), Gaps = 35/145 (24%) Query: 146 VSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCP---------------------- 181 + + ED + LY CV C C+ CP Sbjct: 251 EDEEQEVFGVNKIEDFNQKQLLDLYACVECGRCTNMCPATGTGKMLSPMDLIVKMRDHLT 310 Query: 182 ---------SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTI 230 S W S + A + + + + ++ ++ C T Sbjct: 311 EKGAAVTSKSAWLPSYAFSNTKANQLAMQGAGGAEAAASYDVSLIGDVITEEEIWACTTC 370 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLL 255 NC CP I ++ L+ Sbjct: 371 RNCEDQCPVMNEHVDKIIDMRRYLV 395 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLIVKMRDHLTEKG 313 >gi|319638299|ref|ZP_07993062.1| iron-sulfur protein [Neisseria mucosa C102] gi|317400572|gb|EFV81230.1| iron-sulfur protein [Neisseria mucosa C102] Length = 484 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 21/104 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSR 207 ++ +C+ C C CP Y Y GP + L +R Sbjct: 303 RSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATR 362 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D C C + CP + + + +++ Sbjct: 363 DLPTA--------------CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|298368912|ref|ZP_06980230.1| iron-sulfur cluster-binding protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282915|gb|EFI24402.1| iron-sulfur cluster-binding protein [Neisseria sp. oral taxon 014 str. F0314] Length = 481 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 21/90 (23%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLEATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|323490858|ref|ZP_08096056.1| Fe-S oxidoreductase [Planococcus donghaensis MPA1U2] gi|323395466|gb|EGA88314.1| Fe-S oxidoreductase [Planococcus donghaensis MPA1U2] Length = 713 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 34/129 (26%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ Y CV C C+ CP+ W + Sbjct: 277 QSQMIDFYACVECGRCTNMCPATGTGKMLSPMDLITKLRDNLTNTGAVMTQKKPWVPAMA 336 Query: 190 YLGPAILLQAYRWLIDSR--DEFQGERL-DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + A + DE L ++ ++ C T NC CP Sbjct: 337 FNNTQGNQLAMAAGAEGITIDELYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDK 396 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 397 IIDLRRYLV 405 >gi|89895964|ref|YP_519451.1| hypothetical protein DSY3218 [Desulfitobacterium hafniense Y51] gi|219670390|ref|YP_002460825.1| hypothetical protein Dhaf_4384 [Desulfitobacterium hafniense DCB-2] gi|89335412|dbj|BAE85007.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540650|gb|ACL22389.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 414 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + L C C C T+C +Y + + +Q + + D E + Sbjct: 5 AEVYEMLNTCNRCGFCHTACKTYKVDGAETMVSRGRVQLIKAVADGVIEADADY------ 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C +CP G++ + + + L Sbjct: 59 EDSINSCLLCGECAVACPSGVSAKELVMAARRDL 92 >gi|304393158|ref|ZP_07375086.1| glycolate oxidase, iron-sulfur subunit [Ahrensia sp. R2A130] gi|303294165|gb|EFL88537.1| glycolate oxidase, iron-sulfur subunit [Ahrensia sp. R2A130] Length = 442 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L CV C C+ +CP+Y + P + + ++++ + + +++ R Sbjct: 22 LRSCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENDRPADEQVVTHID------R 75 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C + ++C +CP G++ + + Sbjct: 76 CLSCLSCMTTCPSGVHYMHLVDHAR 100 >gi|91773721|ref|YP_566413.1| hypothetical protein Mbur_1774 [Methanococcoides burtonii DSM 6242] gi|91712736|gb|ABE52663.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanococcoides burtonii DSM 6242] Length = 356 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 K + +CV C C + CP + + + + + D +++ Sbjct: 1 MQEDKQRSILKCVRCGACRSICPVFEEFGWESFSTRGRMLLAKGISNGMD-----VDESM 55 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + C T C Q CP G P+ +++ L+ Sbjct: 56 ID--SINTCTTCGLCEQMCPAGAKPSDVFEELRRDLV 90 >gi|269839285|ref|YP_003323977.1| hypothetical protein Tter_2256 [Thermobaculum terrenum ATCC BAA-798] gi|269791015|gb|ACZ43155.1| protein of unknown function DUF162 [Thermobaculum terrenum ATCC BAA-798] Length = 767 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C+ CP Y G L+ L C Sbjct: 343 RCIRCAACANVCPPYAVVGGHVFGHIYSGAIGLVN-----TPYHHGLEADAGSQSL--CV 395 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C CP G+ + I +++ ++ R Sbjct: 396 SCNACATVCPVGIPLPQQILEVRTEVVRR 424 >gi|167570532|ref|ZP_02363406.1| iron-sulfur cluster binding protein [Burkholderia oklahomensis C6786] Length = 479 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L + D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDQALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R + Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERHL 392 >gi|167563362|ref|ZP_02356278.1| iron-sulfur cluster binding protein [Burkholderia oklahomensis EO147] Length = 479 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L + D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDQALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R + Sbjct: 361 -----------TLCGECDSVCPVGIPISGLLRKLREKQVERHL 392 >gi|303249274|ref|ZP_07335507.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] gi|302489313|gb|EFL49269.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] Length = 395 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 5/83 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 EC++C C +CP + L P R + + R E + + L C Sbjct: 19 ECILCGRCLPACPLFTATGREELSPRSKFFLARAVAEGRAELSKKAAEILATV-----CL 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 + C +CP GL +A+++ Sbjct: 74 SCGKCENACPLGLCGPDLVAELR 96 >gi|255281010|ref|ZP_05345565.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C 1 [Bryantella formatexigens DSM 14469] gi|255268458|gb|EET61663.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit C 1 [Bryantella formatexigens DSM 14469] Length = 130 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C CS +CPSY + +Q E ++ L L++C Sbjct: 22 KCMKCGKCSATCPSYDEMDIKPHQFVSYVQH-------------ENIEALVQSKTLWKCL 68 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP+ + P K I + +++ + Sbjct: 69 SCFACVERCPRDVKPGKLIDAARQIVVRER 98 >gi|206967564|ref|ZP_03228520.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH1134] gi|206736484|gb|EDZ53631.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH1134] Length = 442 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|89095575|ref|ZP_01168469.1| hypothetical protein B14911_02559 [Bacillus sp. NRRL B-14911] gi|89089321|gb|EAR68428.1| hypothetical protein B14911_02559 [Bacillus sp. NRRL B-14911] Length = 703 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 41/168 (24%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V + + + + S + ++ ++ Y CV C C+ CP+ Sbjct: 234 VYFDRTENAGKLKKIDFEDESQESFGVGKIEDFNQLQMIDFYACVECGRCTNMCPA--TG 291 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGER-------------------------------- 214 + + L P L+ R + + R Sbjct: 292 TGKMLSPMDLILKLRDHLTNHGAAVTSRQPWVPTFAFSNTKGNQLALAAAGKGAEEAAAG 351 Query: 215 -------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ++ ++ C T NC CP I ++ L+ Sbjct: 352 LAYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 399 >gi|319652062|ref|ZP_08006182.1| glycolate oxidase iron-sulfur subunit [Bacillus sp. 2_A_57_CT2] gi|317396210|gb|EFV76928.1| glycolate oxidase iron-sulfur subunit [Bacillus sp. 2_A_57_CT2] Length = 452 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +CV C C SCP+Y P + + + + + + + +D Sbjct: 25 DPPDEKKWADCVHCGMCLESCPTYEQTGQEQHSPRGRVHLIKSVAEGKLQVNEQFMDP-- 82 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +++C CT +CP ++ I + + + Sbjct: 83 ----VFQCLDCRACTTACPADVDVGGLIEEARGQI 113 >gi|261380945|ref|ZP_05985518.1| iron-sulfur cluster-binding protein [Neisseria subflava NJ9703] gi|284796202|gb|EFC51549.1| iron-sulfur cluster-binding protein [Neisseria subflava NJ9703] Length = 484 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 21/90 (23%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|293191799|ref|ZP_06609296.1| putative iron-sulfur-binding reductase [Actinomyces odontolyticus F0309] gi|292820447|gb|EFF79431.1| putative iron-sulfur-binding reductase [Actinomyces odontolyticus F0309] Length = 592 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 38/145 (26%), Gaps = 52/145 (35%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------------- 206 + LY C C C CP+ WN+ + L P +L+ R ++S Sbjct: 194 WKARLDLYSCTECGRCQELCPA--WNTQKPLSPKLLIMGLRDHMESASNVQIVEQEEGHQ 251 Query: 207 --------RDEF----------------------------QGERLDNLEDPFRLYRCHTI 230 D+ + + L+ C Sbjct: 252 KLEDGEVLLDKGVPASPHSFDLVSALSLSGATGPEGVSAVTAPLVPEVVSEEVLWDCTNC 311 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 312 GACVEQCPVDIEHIDHILDLRRHQV 336 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 26/91 (28%) Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL----------EDPFR------LYRCH 228 + + LGPA + LID + + D+L D F LY C Sbjct: 150 ADGTKSLGPADHM-----LIDGKPVTSEDDFDDLPEDTVLGVGTIDDFSWKARLDLYSCT 204 Query: 229 TIMNCTQSCP-----KGLNPAKAIAKIKMML 254 C + CP K L+P I ++ + Sbjct: 205 ECGRCQELCPAWNTQKPLSPKLLIMGLRDHM 235 >gi|154508045|ref|ZP_02043687.1| hypothetical protein ACTODO_00535 [Actinomyces odontolyticus ATCC 17982] gi|153797679|gb|EDN80099.1| hypothetical protein ACTODO_00535 [Actinomyces odontolyticus ATCC 17982] Length = 826 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 38/145 (26%), Gaps = 52/145 (35%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------------- 206 + LY C C C CP+ WN+ + L P +L+ R ++S Sbjct: 338 WKARLDLYSCTECGRCQELCPA--WNTQKPLSPKLLIMGLRDHMESASNVQIVEQEEGHQ 395 Query: 207 --------RDEF----------------------------QGERLDNLEDPFRLYRCHTI 230 D+ + + L+ C Sbjct: 396 KLEDGEVLLDKGVPASPHSFDLVSALSLSGATGPEGVSAVTAPLVPEVVSEEVLWDCTNC 455 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLL 255 C + CP + I ++ + Sbjct: 456 GACVEQCPVDIEHIDHILDLRRHQV 480 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 26/91 (28%) Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL----------EDPFR------LYRCH 228 + + LGPA + LID + + D+L D F LY C Sbjct: 294 ADGTKSLGPADHM-----LIDGKPVTSEDDFDDLPEDTVLGVGTIDDFSWKARLDLYSCT 348 Query: 229 TIMNCTQSCP-----KGLNPAKAIAKIKMML 254 C + CP K L+P I ++ + Sbjct: 349 ECGRCQELCPAWNTQKPLSPKLLIMGLRDHM 379 >gi|320451110|ref|YP_004203206.1| iron-sulfur cluster-binding protein [Thermus scotoductus SA-01] gi|320151279|gb|ADW22657.1| iron-sulfur cluster-binding protein [Thermus scotoductus SA-01] Length = 460 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 9/136 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L +S + E + V + + + C+ C C +CP Y Sbjct: 265 LSTYVSLIQGPAKEGEEGPREVHVVLVDHGRTTLLHDPEAWEVLRCLRCGACLNACPVYR 324 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNP 243 G ++D L LED + L Y C ++CP + Sbjct: 325 QTGGHPYGYVYSGPIGA-VLDPG-------LLGLEDTYPLPYASTLCGACYEACPVKIPI 376 Query: 244 AKAIAKIKMMLLDRKI 259 K + + ++R + Sbjct: 377 PKLLLTWRQRAVERGL 392 >gi|296501976|ref|YP_003663676.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus thuringiensis BMB171] gi|296323028|gb|ADH05956.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus thuringiensis BMB171] Length = 442 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDV------EHTLNVCLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|18312857|ref|NP_559524.1| iron-sulfur binding reductase [Pyrobaculum aerophilum str. IM2] gi|18160346|gb|AAL63706.1| iron-sulfur binding reductase, probable [Pyrobaculum aerophilum str. IM2] Length = 534 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVI--KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 LA + A V P ++ V +++ + F + + Sbjct: 99 LAIGTVRNALLAAFYVKPAANLIVNYKREITHFKTPF--RLEDVIEGRLKPEEVKFGYEK 156 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + D++ + C C +CP+ R L P ++++ ++ + +L Sbjct: 157 IADVDKEVVLSCQSCGEIGACDANCPAVAA--GRLLSPRVVVRTVALNSNNPNYELALKL 214 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ++ C T C SCP +N I ++ L+ + Sbjct: 215 EPQ-----VWACTTCGMCVYSCPVKVNHLDVIYGVRRALVAQ 251 >gi|194098461|ref|YP_002001521.1| Iron-sulphur protein [Neisseria gonorrhoeae NCCP11945] gi|240125630|ref|ZP_04738516.1| Iron-sulphur protein [Neisseria gonorrhoeae SK-92-679] gi|240128086|ref|ZP_04740747.1| Iron-sulphur protein [Neisseria gonorrhoeae SK-93-1035] gi|268684219|ref|ZP_06151081.1| iron-sulfur protein [Neisseria gonorrhoeae SK-92-679] gi|268686475|ref|ZP_06153337.1| iron-sulfur protein [Neisseria gonorrhoeae SK-93-1035] gi|193933751|gb|ACF29575.1| Iron-sulphur protein [Neisseria gonorrhoeae NCCP11945] gi|268624503|gb|EEZ56903.1| iron-sulfur protein [Neisseria gonorrhoeae SK-92-679] gi|268626759|gb|EEZ59159.1| iron-sulfur protein [Neisseria gonorrhoeae SK-93-1035] Length = 484 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 21/90 (23%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|59801304|ref|YP_208016.1| hypothetical protein NGO0906 [Neisseria gonorrhoeae FA 1090] gi|239998855|ref|ZP_04718779.1| hypothetical protein Ngon3_05146 [Neisseria gonorrhoeae 35/02] gi|240014230|ref|ZP_04721143.1| hypothetical protein NgonD_06232 [Neisseria gonorrhoeae DGI18] gi|240016666|ref|ZP_04723206.1| hypothetical protein NgonFA_05798 [Neisseria gonorrhoeae FA6140] gi|240080855|ref|ZP_04725398.1| hypothetical protein NgonF_06031 [Neisseria gonorrhoeae FA19] gi|240112781|ref|ZP_04727271.1| hypothetical protein NgonM_04217 [Neisseria gonorrhoeae MS11] gi|240115532|ref|ZP_04729594.1| hypothetical protein NgonPID1_04665 [Neisseria gonorrhoeae PID18] gi|240117827|ref|ZP_04731889.1| hypothetical protein NgonPID_05072 [Neisseria gonorrhoeae PID1] gi|240121793|ref|ZP_04734755.1| hypothetical protein NgonPI_08537 [Neisseria gonorrhoeae PID24-1] gi|240123383|ref|ZP_04736339.1| hypothetical protein NgonP_05480 [Neisseria gonorrhoeae PID332] gi|254493641|ref|ZP_05106812.1| iron-sulphur protein [Neisseria gonorrhoeae 1291] gi|260440656|ref|ZP_05794472.1| hypothetical protein NgonDG_06155 [Neisseria gonorrhoeae DGI2] gi|268594698|ref|ZP_06128865.1| iron-sulfur protein [Neisseria gonorrhoeae 35/02] gi|268596972|ref|ZP_06131139.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268598849|ref|ZP_06133016.1| iron-sulfur protein [Neisseria gonorrhoeae MS11] gi|268601207|ref|ZP_06135374.1| iron-sulfur protein [Neisseria gonorrhoeae PID18] gi|268603527|ref|ZP_06137694.1| iron-sulfur protein [Neisseria gonorrhoeae PID1] gi|268682008|ref|ZP_06148870.1| iron-sulfur protein [Neisseria gonorrhoeae PID332] gi|291043963|ref|ZP_06569679.1| iron-sulfur protein [Neisseria gonorrhoeae DGI2] gi|293399163|ref|ZP_06643328.1| iron-sulfur cluster-binding protein [Neisseria gonorrhoeae F62] gi|59718199|gb|AAW89604.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226512681|gb|EEH62026.1| iron-sulphur protein [Neisseria gonorrhoeae 1291] gi|268548087|gb|EEZ43505.1| iron-sulfur protein [Neisseria gonorrhoeae 35/02] gi|268550760|gb|EEZ45779.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268582980|gb|EEZ47656.1| iron-sulfur protein [Neisseria gonorrhoeae MS11] gi|268585338|gb|EEZ50014.1| iron-sulfur protein [Neisseria gonorrhoeae PID18] gi|268587658|gb|EEZ52334.1| iron-sulfur protein [Neisseria gonorrhoeae PID1] gi|268622292|gb|EEZ54692.1| iron-sulfur protein [Neisseria gonorrhoeae PID332] gi|291012426|gb|EFE04415.1| iron-sulfur protein [Neisseria gonorrhoeae DGI2] gi|291610577|gb|EFF39687.1| iron-sulfur cluster-binding protein [Neisseria gonorrhoeae F62] gi|317164144|gb|ADV07685.1| hypothetical protein NGTW08_0714 [Neisseria gonorrhoeae TCDC-NG08107] Length = 484 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 21/90 (23%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|109898597|ref|YP_661852.1| FAD linked oxidase-like [Pseudoalteromonas atlantica T6c] gi|109700878|gb|ABG40798.1| FAD linked oxidase-like protein [Pseudoalteromonas atlantica T6c] Length = 949 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 14/95 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR------DEFQGERLDNLEDP 221 +C+ C C CPS + P + +R + R D E L LE Sbjct: 539 DKCIECGFCEAVCPSQALSYT----PRQRIAIWRRIQQLREAEIVTDSETQE-LQQLETD 593 Query: 222 F---RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 F + C C Q CP G+N I +++ Sbjct: 594 FQYMGIDTCAATGLCAQRCPVGINTGDLIRQLRSE 628 >gi|326798089|ref|YP_004315908.1| lactate utilization protein B/C [Sphingobacterium sp. 21] gi|326548853|gb|ADZ77238.1| Lactate utilization protein B/C [Sphingobacterium sp. 21] Length = 457 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R +C+ C C +CP Y + AI L + D + L Sbjct: 297 RPDFKNSLKCIRCGACMNTCPVYRRSGGHSYHHAISGPIGSILAPNLDMEKFADLP---- 352 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +C+ CP ++ + K + L+ Sbjct: 353 ----FASTLCGSCSNVCPVKIDIHNQLYKWRQELVKAG 386 >gi|261365016|ref|ZP_05977899.1| iron-sulfur cluster-binding protein [Neisseria mucosa ATCC 25996] gi|288566603|gb|EFC88163.1| iron-sulfur cluster-binding protein [Neisseria mucosa ATCC 25996] Length = 484 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 21/90 (23%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L +RD Sbjct: 317 QCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDATRDLPTA--------- 367 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + +++ Sbjct: 368 -----CTMCGACVEVCPVRIPITEQMQRLR 392 >gi|51244861|ref|YP_064745.1| Fe-S oxidoreductase [Desulfotalea psychrophila LSv54] gi|50875898|emb|CAG35738.2| probable Fe-S oxidoreductase [Desulfotalea psychrophila LSv54] Length = 495 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 13/85 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+ +CP + L P +++ +D + L + ++ Sbjct: 100 ASSCLTCGTCAAACPIAGVDG---LDPRKIVRMAVLGMD----------EELINSTWPWK 146 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +SCP + I KI+ Sbjct: 147 CTMCGKCEESCPADIQITALIRKIR 171 >gi|254195752|ref|ZP_04902178.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei S13] gi|169652497|gb|EDS85190.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei S13] Length = 483 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 7/96 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C CP Y G Q L S + L+ P Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGQMGSVLTPSYVGLA----NALDLPQA 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + K++ ++R++ Sbjct: 360 A---TLCGECDSVCPVGIPISGLLRKLREKQVERRL 392 >gi|291613292|ref|YP_003523449.1| iron-sulfur cluster binding protein [Sideroxydans lithotrophicus ES-1] gi|291583404|gb|ADE11062.1| iron-sulfur cluster binding protein [Sideroxydans lithotrophicus ES-1] Length = 477 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 53/225 (23%), Gaps = 21/225 (9%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 Y D+D + L + D + + +C T Sbjct: 180 DYTEDVDELIRIGRKVLRRKFAEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTVPKVH 239 Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVD------MSHFYSQHRSIEPWLKTVSPKPAK----- 152 + V L H+ + L+ ++ +++ + P Sbjct: 240 IAVTGIEKVVEKLEHVLPLYSLLTRSATGQTITTYFNMISHPRQPGEKDGPGEVHLILID 299 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 +++ +C+ C C CP Y G + Sbjct: 300 NGRSQAYADEQLRATLQCIRCGACMNHCPVYARIGGHAYGTTYPGPIGAIV-------SP 352 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L + C + CP + + +++ R Sbjct: 353 HMLGLAATYPLAFASTLCGACVEVCPVKIPITDILVRLRNEAQAR 397 >gi|319648129|ref|ZP_08002346.1| YwjF protein [Bacillus sp. BT1B_CT2] gi|317389764|gb|EFV70574.1| YwjF protein [Bacillus sp. BT1B_CT2] Length = 704 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLIDS---- 206 LY CV C C+ CP+ + + L P L+ R W+ Sbjct: 273 DLYACVECGRCTNMCPA--TGTGKMLSPMDLILRLRDHLTEKGAAVTSRTPWVPAPLFQH 330 Query: 207 ---------------RDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ E + ++ ++ C T NC CP Sbjct: 331 TKGNQLAMAAGGEGSREAAASELYNPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDK 390 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 391 IIDLRRYLV 399 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|307596508|ref|YP_003902825.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551709|gb|ADN51774.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 458 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 4/99 (4%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E+R + L C+ C C CP+Y + P + R L+ R + ++ Sbjct: 47 RENRNLVLSLSLCMGCGACLMVCPAYLTTRNIKNSPLGRIALARSLM--RGPVNEDLINE 104 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++C T C +CP G++ A I+ +L + Sbjct: 105 AYTY--FWQCLTCRRCAWTCPFGVDVADISRTIRSLLYE 141 >gi|52082255|ref|YP_081046.1| 4Fe-4S ferredoxin protein [Bacillus licheniformis ATCC 14580] gi|52787647|ref|YP_093476.1| YwjF [Bacillus licheniformis ATCC 14580] gi|52005466|gb|AAU25408.1| 4Fe-4S ferredoxin protein [Bacillus licheniformis ATCC 14580] gi|52350149|gb|AAU42783.1| YwjF [Bacillus licheniformis ATCC 14580] Length = 704 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLIDS---- 206 LY CV C C+ CP+ + + L P L+ R W+ Sbjct: 273 DLYACVECGRCTNMCPA--TGTGKMLSPMDLILRLRDHLTEKGAAVTSRTPWVPAPLFQH 330 Query: 207 ---------------RDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ E + ++ ++ C T NC CP Sbjct: 331 TKGNQLAMAAGGEGSREAAASELYNPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDK 390 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 391 IIDLRRYLV 399 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|114566543|ref|YP_753697.1| glycolate oxidase iron-sulfur subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337478|gb|ABI68326.1| glycolate oxidase iron-sulfur subunit, putative [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 430 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ HE + + +CV C C + CP + + P + + L D + E + Sbjct: 1 MEFHELPPVKEQIMKCVRCGKCRSVCPVFAEIRNETAAPRGHVFMVQMLRDGKVEPNNDV 60 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RL C NC+ +CP G++ + A + + D+ Sbjct: 61 ------SERLSNCLMCENCSVNCPSGIDIHELNAAARSYIYDK 97 >gi|296123856|ref|YP_003631634.1| hypothetical protein Plim_3623 [Planctomyces limnophilus DSM 3776] gi|296016196|gb|ADG69435.1| protein of unknown function DUF162 [Planctomyces limnophilus DSM 3776] Length = 465 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y + + L SRD Q L + C Sbjct: 305 HCIRCGACMNTCPVYRRSGGHSYETTVPGPIGSILAPSRDPAQHSTLP--------FACS 356 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +C+ CP ++ + + + Sbjct: 357 LCGSCSDVCPVKIDLHLQLLTWRKQIA 383 >gi|113953410|ref|YP_729449.1| Fe-S oxidoreductase [Synechococcus sp. CC9311] gi|113880761|gb|ABI45719.1| Fe-S oxidoreductase [Synechococcus sp. CC9311] Length = 459 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 6/91 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +D CV C C +C SY P + + + E LD Sbjct: 24 MAFVDPSDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAI-----EAGELELDATVA 78 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ + I + Sbjct: 79 SH-FDSCLGCFACVSACPSGVRYDQLIEATR 108 >gi|301054755|ref|YP_003792966.1| Iron-sulfur cluster-binding protein [Bacillus anthracis CI] gi|300376924|gb|ADK05828.1| Iron-sulfur cluster-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|300118405|ref|ZP_07056151.1| iron-sulfur cluster-binding protein [Bacillus cereus SJ1] gi|298724190|gb|EFI64886.1| iron-sulfur cluster-binding protein [Bacillus cereus SJ1] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|254723205|ref|ZP_05184993.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A1055] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|228934501|ref|ZP_04097336.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825138|gb|EEM70935.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 468 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 308 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 361 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 390 >gi|228946860|ref|ZP_04109162.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228812847|gb|EEM59166.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 468 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 308 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 361 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 390 >gi|229030930|ref|ZP_04186949.1| Iron-sulfur cluster binding protein [Bacillus cereus AH1271] gi|228730424|gb|EEL81385.1| Iron-sulfur cluster binding protein [Bacillus cereus AH1271] Length = 468 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 308 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 361 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 390 >gi|228915837|ref|ZP_04079413.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928295|ref|ZP_04091336.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229122773|ref|ZP_04251982.1| Iron-sulfur cluster binding protein [Bacillus cereus 95/8201] gi|228660637|gb|EEL16268.1| Iron-sulfur cluster binding protein [Bacillus cereus 95/8201] gi|228831342|gb|EEM76938.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843818|gb|EEM88891.1| Iron-sulfur cluster binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 468 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 308 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 361 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 390 >gi|229197368|ref|ZP_04324095.1| Iron-sulfur cluster binding protein [Bacillus cereus m1293] gi|228585992|gb|EEK44083.1| Iron-sulfur cluster binding protein [Bacillus cereus m1293] Length = 468 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 308 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 361 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 390 >gi|225865188|ref|YP_002750566.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB102] gi|225790169|gb|ACO30386.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB102] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|206974720|ref|ZP_03235636.1| iron-sulfur cluster-binding protein [Bacillus cereus H3081.97] gi|222096726|ref|YP_002530783.1| iron-sulfur cluster-binding protein [Bacillus cereus Q1] gi|206747363|gb|EDZ58754.1| iron-sulfur cluster-binding protein [Bacillus cereus H3081.97] gi|221240784|gb|ACM13494.1| iron-sulfur cluster-binding protein [Bacillus cereus Q1] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|196032614|ref|ZP_03100028.1| iron-sulfur cluster-binding protein [Bacillus cereus W] gi|195995365|gb|EDX59319.1| iron-sulfur cluster-binding protein [Bacillus cereus W] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|218904378|ref|YP_002452212.1| iron-sulfur cluster-binding protein [Bacillus cereus AH820] gi|218539661|gb|ACK92059.1| iron-sulfur cluster-binding protein [Bacillus cereus AH820] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|52142285|ref|YP_084544.1| iron-sulfur cluster-binding protein [Bacillus cereus E33L] gi|51975754|gb|AAU17304.1| iron-sulfur cluster-binding protein [Bacillus cereus E33L] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|152974821|ref|YP_001374338.1| hypothetical protein Bcer98_1017 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023573|gb|ABS21343.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus cytotoxicus NVH 391-98] Length = 442 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + +++ + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKEQIQKEFKERLNEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|30263190|ref|NP_845567.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Ames] gi|47528557|ref|YP_019906.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186041|ref|YP_029293.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Sterne] gi|65320518|ref|ZP_00393477.1| COG1139: Uncharacterized conserved protein containing a ferredoxin-like domain [Bacillus anthracis str. A2012] gi|165868294|ref|ZP_02212954.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0488] gi|167631928|ref|ZP_02390255.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0442] gi|167637276|ref|ZP_02395556.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0193] gi|170684992|ref|ZP_02876217.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0465] gi|170705111|ref|ZP_02895576.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0389] gi|177649986|ref|ZP_02932987.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0174] gi|190564708|ref|ZP_03017629.1| iron-sulfur cluster-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227813943|ref|YP_002813952.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CDC 684] gi|229604528|ref|YP_002867454.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0248] gi|254685799|ref|ZP_05149658.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254738269|ref|ZP_05195972.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254742563|ref|ZP_05200248.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Kruger B] gi|254752584|ref|ZP_05204620.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Vollum] gi|254761100|ref|ZP_05213124.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Australia 94] gi|30257824|gb|AAP27053.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Ames] gi|47503705|gb|AAT32381.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179968|gb|AAT55344.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Sterne] gi|164715020|gb|EDR20537.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0488] gi|167514783|gb|EDR90149.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0193] gi|167532226|gb|EDR94862.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0442] gi|170129966|gb|EDS98828.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0389] gi|170671252|gb|EDT21990.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0465] gi|172083938|gb|EDT68997.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0174] gi|190564025|gb|EDV17989.1| iron-sulfur cluster-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227002815|gb|ACP12558.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CDC 684] gi|229268936|gb|ACQ50573.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0248] Length = 470 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 310 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + ++++ Sbjct: 363 L-----CGACTDVCPVKIPLHDLLIEHRKDVVEQG 392 >gi|328555425|gb|AEB25917.1| iron-sulfur-binding reductase [Bacillus amyloliquefaciens TA208] gi|328913795|gb|AEB65391.1| putative iron-sulfur-binding reductase [Bacillus amyloliquefaciens LL3] Length = 702 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 41/134 (30%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLID 205 R ++ LY CV C C+ CP+ + L P L+ R W+ Sbjct: 268 RSQLVDLYACVECGRCTNMCPASGT--GKMLSPMDLILKLRDHLTEKGAAVTSKSPWVPA 325 Query: 206 S-------------------RDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGL 241 R+ + + ++ C T NC CP Sbjct: 326 PVFQHTKANQLAAASSGGGSREAAAAIDYNPSLIGEVITEEEIWACTTCRNCEDQCPVMN 385 Query: 242 NPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 EHVDKIIDLRRYLV 399 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R L D LY C CT CP K L+P I K++ L ++ Sbjct: 267 RRSQLVD---LYACVECGRCTNMCPASGTGKMLSPMDLILKLRDHLTEKG 313 >gi|326939018|gb|AEA14914.1| (S)-2-hydroxy-acid oxidase subunit GlcF [Bacillus thuringiensis serovar chinensis CT-43] Length = 442 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|308175445|ref|YP_003922150.1| iron-sulfur-binding reductase [Bacillus amyloliquefaciens DSM 7] gi|307608309|emb|CBI44680.1| putative iron-sulphur-binding reductase [Bacillus amyloliquefaciens DSM 7] Length = 702 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 41/134 (30%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLID 205 R ++ LY CV C C+ CP+ + L P L+ R W+ Sbjct: 268 RSQLVDLYACVECGRCTNMCPASGT--GKMLSPMDLILKLRDHLTEKGAAVTSKSPWVPA 325 Query: 206 S-------------------RDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGL 241 R+ + + ++ C T NC CP Sbjct: 326 PVFQHTKANQLAAASSGGGSREAAAAIDYNPSLIGEVITEEEIWACTTCRNCEDQCPVMN 385 Query: 242 NPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 EHVDKIIDLRRYLV 399 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R L D LY C CT CP K L+P I K++ L ++ Sbjct: 267 RRSQLVD---LYACVECGRCTNMCPASGTGKMLSPMDLILKLRDHLTEKG 313 >gi|167629187|ref|YP_001679686.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] gi|167591927|gb|ABZ83675.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] Length = 685 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 39/152 (25%), Gaps = 44/152 (28%) Query: 146 VSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 ED Y CV C C+ CP+Y + L P L R Sbjct: 248 EDESVESYGAVKMEDFTWKELFDAYTCVQCGRCTDQCPAYQT--GKPLNPKALHVTLRSH 305 Query: 204 IDSR----DEFQGERLDN------------------------------------LEDPFR 223 ID + D+ +R + Sbjct: 306 IDEKGPLLDKIHKQRSAAKGVGQGRAGAEEVAAAAEGVLTEGEQAIMEKKVTGEIFSEDF 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C T C ++CP + +++ ++ Sbjct: 366 FWSCTTCRGCMEACPVSNEHIPKLVEMRRYMV 397 >gi|42780483|ref|NP_977730.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus cereus ATCC 10987] gi|42736402|gb|AAS40338.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus cereus ATCC 10987] Length = 442 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|313680287|ref|YP_004058026.1| hypothetical protein Ocepr_1397 [Oceanithermus profundus DSM 14977] gi|313153002|gb|ADR36853.1| protein of unknown function DUF224 cysteine-rich region domain protein [Oceanithermus profundus DSM 14977] Length = 426 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 25/82 (30%), Gaps = 6/82 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV C C + CP+Y P + Y + + L+ Sbjct: 11 QDAEACVRCGLCLSVCPTYRETQLEIQSPRGRVMLYADHAQGLVDDPLKVLEAA------ 64 Query: 225 YRCHTIMNCTQSCPKGLNPAKA 246 Y C C CP + P +A Sbjct: 65 YDCLDCRACQTVCPNDVKPGEA 86 >gi|11499580|ref|NP_070822.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] gi|2648542|gb|AAB89258.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] Length = 354 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 17/93 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ CA CS+SC + I R++ D + E Sbjct: 1 MVSLTACMQCAVCSSSCSMRYA-------MNIRKLIARYISSGDDFWSEE---------- 43 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ C T C CP+G+ I + + +++ Sbjct: 44 LWNCTTCHVCQDRCPRGIPITDLIVEARSRVIE 76 >gi|307594660|ref|YP_003900977.1| hypothetical protein Vdis_0528 [Vulcanisaeta distributa DSM 14429] gi|307549861|gb|ADN49926.1| protein of unknown function DUF224 cysteine-rich region domain protein [Vulcanisaeta distributa DSM 14429] Length = 427 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + Y+CV C C +CP+Y + P + + L+ + + L++L+ Sbjct: 16 NEAYKCVHCGFCLPTCPTYRATWNEADSPRGRIYLVKALLTGKLQPTETLLEHLD----- 70 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIA 248 C C +CP G+ +K + Sbjct: 71 -ACVICRRCETACPSGVQYSKVLE 93 >gi|261251030|ref|ZP_05943604.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio orientalis CIP 102891] gi|260937903|gb|EEX93891.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio orientalis CIP 102891] Length = 945 Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER---LDNLEDPFRL 224 C+ C C CPS L P + YR L RD + L + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRDAGEQTEATELAQIFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+N + +++ Sbjct: 600 DTCAATGLCADRCPVGINTGDLVKQLR 626 >gi|196035330|ref|ZP_03102735.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus W] gi|218902502|ref|YP_002450336.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH820] gi|301052933|ref|YP_003791144.1| (S)-2-hydroxy-acid oxidase [Bacillus anthracis CI] gi|195992007|gb|EDX55970.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus W] gi|218536707|gb|ACK89105.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH820] gi|300375102|gb|ADK04006.1| (S)-2-hydroxy-acid oxidase [Bacillus cereus biovar anthracis str. CI] Length = 442 Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|52144040|ref|YP_082788.1| (S)-2-hydroxy-acid oxidase [Bacillus cereus E33L] gi|51977509|gb|AAU19059.1| (S)-2-hydroxy-acid oxidase [Bacillus cereus E33L] Length = 442 Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R + L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSENELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|118476869|ref|YP_894020.1| (S)-2-hydroxy-acid oxidase [Bacillus thuringiensis str. Al Hakam] gi|118416094|gb|ABK84513.1| (S)-2-hydroxy-acid oxidase [Bacillus thuringiensis str. Al Hakam] Length = 442 Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|49480034|ref|YP_035522.1| (S)-2-hydroxy-acid oxidase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331590|gb|AAT62236.1| (S)-2-hydroxy-acid oxidase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|88808126|ref|ZP_01123637.1| Fe-S oxidoreductase [Synechococcus sp. WH 7805] gi|88788165|gb|EAR19321.1| Fe-S oxidoreductase [Synechococcus sp. WH 7805] Length = 437 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 6/84 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C +C SY P + + + + E LD C Sbjct: 23 DPCVHCGFCLPTCASYRVLGTEMDSPRGRIHSLKAI-----EAGELELDATVASH-FDSC 76 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C +CP G+ + I + Sbjct: 77 LGCFACVSACPSGVRYDQLIEATR 100 >gi|225863257|ref|YP_002748635.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus 03BB102] gi|225790331|gb|ACO30548.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus 03BB102] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|196046528|ref|ZP_03113753.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus 03BB108] gi|196022712|gb|EDX61394.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus 03BB108] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|157692563|ref|YP_001487025.1| (S)-2-hydroxy-acid oxidase subunit F [Bacillus pumilus SAFR-032] gi|157681321|gb|ABV62465.1| (S)-2-hydroxy-acid oxidase subunit F [Bacillus pumilus SAFR-032] Length = 447 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 7/106 (6%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQG 212 + Q+ + + L C+ C C SCP+Y + P + + + D E Sbjct: 9 MQQTFQQQMDEKELLNCMRCGFCLPSCPTYIESGQQEAHSPRGRIALMKAVRDGVIEPDK 68 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C CP G+ + + + ++ K Sbjct: 69 DV------EHSLNLCLGCRACEPVCPSGVKYGRLLEDARDIIQQHK 108 >gi|317478250|ref|ZP_07937415.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_1_36] gi|316905557|gb|EFV27346.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Bacteroides sp. 4_1_36] Length = 173 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 15/166 (9%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGI 84 +++R K +TY + L+ L + ++ + CREGI Sbjct: 8 TLKVWRQK-GPKAKGAFETYQMKDIPGDTSFLEMLDILNEQLISEGKEPVVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFYS 134 CG C + I+G C M+ + P VIKDL+VD + + Sbjct: 67 CGMCSLYINGHPHGPATGATTCQIYMRRFNDGDTITVEPWRSAGFPVIKDLMVDRTAYDK 126 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++ + + + C C Sbjct: 127 IMQAGGYVSVRTGAPQDANAILIPKPIADEAYGCCQLYRLWCLCGC 172 >gi|239905384|ref|YP_002952123.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239795248|dbj|BAH74237.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 395 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C++C C CP + L P + L + R E + + L C + Sbjct: 20 CILCGRCLPVCPLFTATGREELSPRAKFFLAKALGEGRAELSAKAAEMLTT-----ACLS 74 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 C +CP GL +A+I+ Sbjct: 75 CGRCEDACPLGLCGPDLVAEIR 96 >gi|229177802|ref|ZP_04305175.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus 172560W] gi|228605593|gb|EEK63041.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus 172560W] Length = 439 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++R D L C+ C C +CP+Y P + + ++D E + Sbjct: 8 KEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDV 67 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C CP G+N + + + ++ K Sbjct: 68 ENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 105 >gi|89094201|ref|ZP_01167143.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Oceanospirillum sp. MED92] gi|89081456|gb|EAR60686.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Oceanospirillum sp. MED92] Length = 945 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 5/117 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P + D + +C+ C C CPS L P Sbjct: 509 HGILNPDVMITRDPKLHISNLKPMAAVSDIVDQCIECGFCERMCPSRNLT----LSPRQR 564 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R L D + + D + C C+ CP G+N + +++ Sbjct: 565 IIGKRELA-LLDGENQQTFADEYDYMAIDTCAGCGLCSTVCPVGINTGDLVRQLRHD 620 >gi|218235653|ref|YP_002366078.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus B4264] gi|218163610|gb|ACK63602.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus B4264] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEETRDIINQNK 108 >gi|321313268|ref|YP_004205555.1| putative iron-sulfur-binding reductase [Bacillus subtilis BSn5] gi|320019542|gb|ADV94528.1| putative iron-sulfur-binding reductase [Bacillus subtilis BSn5] Length = 705 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 45/167 (26%) Query: 132 FYSQHRSIEPWLKTV--SPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYWWNS 187 F+++ S K ED R ++ LY CV C C+ CP+ + Sbjct: 235 FFNRMESAGKLEKIDFTDETKESYGAGKIEDFRRSQLLDLYACVECGRCTNMCPA--TGT 292 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGER--------------------------------- 214 + L P L+ R + + R Sbjct: 293 GKMLSPMDLILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAASSAGSGSQEAAAAL 352 Query: 215 ------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ++ ++ C T NC CP I ++ L+ Sbjct: 353 DYNPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 399 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R L D LY C CT CP K L+P I +++ L ++ Sbjct: 267 RRSQLLD---LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|196040663|ref|ZP_03107962.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus NVH0597-99] gi|196028453|gb|EDX67061.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus NVH0597-99] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|217958870|ref|YP_002337418.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH187] gi|222095029|ref|YP_002529089.1| (s)-2-hydroxy-acid oxidase [Bacillus cereus Q1] gi|217064528|gb|ACJ78778.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH187] gi|221239087|gb|ACM11797.1| (S)-2-hydroxy-acid oxidase [Bacillus cereus Q1] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|258593763|emb|CBE70104.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 438 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 6/97 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + +CV C C +CP+Y + P L R + + + +++ Sbjct: 18 DPPDPELFLDCVHCGFCLPTCPTYLVLGNEMDSPRGRLHLIRTVSEGKIGISDSFARHMD 77 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C +CP G+ + + + Sbjct: 78 ------LCLLCRACETACPSGVKFGLLMEATRGQIAR 108 >gi|241766632|ref|ZP_04764481.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax delafieldii 2AN] gi|241363084|gb|EER58710.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidovorax delafieldii 2AN] Length = 444 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 22/155 (14%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKE---------LLQSHEDRQKIDGLYECVMCACC 176 +++M F+ +I + P + ++++ DR L CV C C Sbjct: 1 MINMDVFHGFLEAIRHLPEMAQPTAMTDAERVAKAKSVMRAKTDRSLALDLEACVNCGYC 60 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---FQGERL---DNLEDPFRLY----- 225 S SC + D P+ L R + +R+ +RL D + + + Sbjct: 61 SESCHFFQSTQDAKYSPSRKLDLLRRV-HARETSAFAPIKRLFVSDITVNDLKEWQELVY 119 Query: 226 -RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C+ CP G+N A+ + ++ L + + Sbjct: 120 DSCTECGRCSMICPMGINTARGVNVMREALYEAGL 154 >gi|206977556|ref|ZP_03238450.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus H3081.97] gi|206744274|gb|EDZ55687.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus cereus H3081.97] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|153872669|ref|ZP_02001494.1| Electron transport complex protein rnfC [Beggiatoa sp. PS] gi|152070866|gb|EDN68507.1| Electron transport complex protein rnfC [Beggiatoa sp. PS] Length = 446 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ Y C+ C C +CP +L P+ + R + R Sbjct: 361 LAFTDEETGKPKEYSCIHCGRCVEACP-------HFLNPS---RLARL-------SKKRR 403 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D + L C CT SCP G+ + I K + K Sbjct: 404 YTEMTD-YNLMDCVECGACTFSCPSGIPIVQLIKVAKTEIRRAK 446 >gi|78044931|ref|YP_360426.1| putative iron-sulfur-binding reductase [Carboxydothermus hydrogenoformans Z-2901] gi|77997046|gb|ABB15945.1| putative iron-sulfur-binding reductase [Carboxydothermus hydrogenoformans Z-2901] Length = 681 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 25/115 (21%) Query: 166 GLYECVMCACCSTSCPSYWWNS-----------DRYLGPAILLQAYRWLID------SRD 208 L C C C +CP+Y L + R + + Sbjct: 277 DLDSCTRCGRCQDNCPAYLTKKPLSPKKMTQDLKEALNERAPVIIARAKAELAKKGLGEE 336 Query: 209 EFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 GE + + + ++ C T C + CP + +++ L+ Sbjct: 337 AATGEVEGAVTRALIGEVIEEDTIWSCTTCRACQEVCPVYVEHIPKTVELRRNLV 391 >gi|56965011|ref|YP_176742.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] gi|56911254|dbj|BAD65781.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] Length = 440 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 29/108 (26%), Gaps = 7/108 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + + R L C+ C C CP+Y P + + + Sbjct: 1 MEMTAREQAIQADFAKRMDETELLNCMQCGFCLPHCPTYLETGYQEAHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D E L C C CP G+N + + + Sbjct: 61 HDGLIAPDEEVKR------SLDLCLGCRACEPVCPAGVNYGHMLEEAR 102 >gi|30261397|ref|NP_843774.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus anthracis str. Ames] gi|47526573|ref|YP_017922.1| glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49184227|ref|YP_027479.1| glycolate oxidase iron-sulfur subunit [Bacillus anthracis str. Sterne] gi|65318662|ref|ZP_00391621.1| COG0247: Fe-S oxidoreductase [Bacillus anthracis str. A2012] gi|165870313|ref|ZP_02214968.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0488] gi|167634387|ref|ZP_02392708.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0442] gi|167639275|ref|ZP_02397547.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0193] gi|170686820|ref|ZP_02878040.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0465] gi|170706218|ref|ZP_02896679.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0389] gi|177651596|ref|ZP_02934385.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0174] gi|190568773|ref|ZP_03021677.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis Tsiankovskii-I] gi|227815864|ref|YP_002815873.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. CDC 684] gi|229604200|ref|YP_002865813.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0248] gi|254682545|ref|ZP_05146406.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. CNEVA-9066] gi|254726207|ref|ZP_05187989.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A1055] gi|254733963|ref|ZP_05191677.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. Western North America USA6153] gi|254740349|ref|ZP_05198040.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. Kruger B] gi|254753737|ref|ZP_05205772.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. Vollum] gi|254758833|ref|ZP_05210860.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. Australia 94] gi|30255251|gb|AAP25260.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. Ames] gi|47501721|gb|AAT30397.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49178154|gb|AAT53530.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus anthracis str. Sterne] gi|164713808|gb|EDR19330.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0488] gi|167512714|gb|EDR88088.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0193] gi|167530275|gb|EDR93001.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0442] gi|170128752|gb|EDS97618.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0389] gi|170669343|gb|EDT20086.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0465] gi|172082874|gb|EDT67937.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0174] gi|190560189|gb|EDV14170.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis Tsiankovskii-I] gi|227003966|gb|ACP13709.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. CDC 684] gi|229268608|gb|ACQ50245.1| putative glycolate oxidase, iron-sulfur subunit [Bacillus anthracis str. A0248] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|324325412|gb|ADY20672.1| (S)-2-hydroxy-acid oxidase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 442 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|148264460|ref|YP_001231166.1| hypothetical protein Gura_2414 [Geobacter uraniireducens Rf4] gi|146397960|gb|ABQ26593.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 652 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 14/153 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMC 173 LP+ + L + F+ + + + S + D C C Sbjct: 214 LPYSKHMHILTAIPNCFFKSLEKPNTQPREEFTEGNSYGVGSVDSFNWKDLFDSFSCTEC 273 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLI---DSRDEFQGERLDNLEDP-------FR 223 C +CP+ + + L P ++ + + + +G + L Sbjct: 274 GRCQQACPA--AVTGKPLNPRQVIHDIKENLLANGPLLQRKGAPVLPLIGEGDGSVARES 331 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ C T +C +CP + + K++ L+ Sbjct: 332 IWSCTTCGSCLSACPVFIEQMPKLVKMRRHLVQ 364 >gi|229189476|ref|ZP_04316493.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus ATCC 10876] gi|228594067|gb|EEK51869.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus ATCC 10876] Length = 439 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++R D L C+ C C +CP+Y P + + ++D E + Sbjct: 8 KEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDV 67 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C CP G+N + + + ++ K Sbjct: 68 ENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 105 >gi|194014949|ref|ZP_03053566.1| glycolate oxidase, iron-sulfur subunit [Bacillus pumilus ATCC 7061] gi|194013975|gb|EDW23540.1| glycolate oxidase, iron-sulfur subunit [Bacillus pumilus ATCC 7061] Length = 447 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQGER 214 Q+ + + L C+ C C SCP+Y + P + + + D E + Sbjct: 11 QTFQQQMDEKELLNCMRCGFCLPSCPTYIESGQQETHSPRGRIALMKAVRDGVIEPDEDV 70 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+ + + + ++ K Sbjct: 71 ------EHSLNLCLGCRACEPVCPSGVKYGRLLEDARDIIQQHK 108 >gi|91772513|ref|YP_565205.1| hypothetical protein Mbur_0470 [Methanococcoides burtonii DSM 6242] gi|91711528|gb|ABE51455.1| protein with two cysteine-rich domains [Methanococcoides burtonii DSM 6242] Length = 361 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 8/91 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C C ++Y + ++ + + E D ++D +Y Sbjct: 9 SYCIDCGKCYDVCHIAKVTDNKYTPRSKIMLLQKLI-----EGDELDQDEVDD---VYLS 60 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +CP + I + + +L ++ Sbjct: 61 TRCGACDDACPMNIPITDIIQRERTILAEQG 91 >gi|70607400|ref|YP_256270.1| 4Fe-4S binding domain-containing protein [Sulfolobus acidocaldarius DSM 639] gi|68568048|gb|AAY80977.1| conserved Archaeal 4Fe-4S binding domain protein [Sulfolobus acidocaldarius DSM 639] Length = 388 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 20/87 (22%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + +Y D++ Sbjct: 301 CIRCGRCHMHCPVYRVEGVDWGDPPYTGPMGAMWSYAVYRDTKPAM-------------- 346 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C NC + CP +N + + +IK Sbjct: 347 -YCMHSGNCKEVCPMKINIPRVLERIK 372 >gi|228907025|ref|ZP_04070890.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis IBL 200] gi|228852616|gb|EEM97405.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis IBL 200] Length = 439 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++R D L C+ C C +CP+Y P + + ++D E + Sbjct: 8 KEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDV 67 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C CP G+N + + + ++ K Sbjct: 68 ENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 105 >gi|121534550|ref|ZP_01666372.1| ferredoxin [Thermosinus carboxydivorans Nor1] gi|121306802|gb|EAX47722.1| ferredoxin [Thermosinus carboxydivorans Nor1] Length = 123 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNC-GPMVLDGLLYIKNKIDPTLTLRRS-CREGICGS 87 + +R+NP ++ Y V+ M L ++ +DPT R S C +G CGS Sbjct: 10 VKAFRFNPATDAAGRLEEYTVESSEPLSVMALLAKIH---DLDPTFACRTSTCFKGKCGS 66 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 C + ++G + L C ++ + V P +++D+ VD + Sbjct: 67 CLVRVNGQDVLGCTTLVRP-GETVVVEPHSRFKLLRDVAVDFTQ 109 >gi|298528933|ref|ZP_07016336.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfonatronospira thiodismutans ASO3-1] gi|298510369|gb|EFI34272.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfonatronospira thiodismutans ASO3-1] Length = 380 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 13/112 (11%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + L +C CA CS CP + + P + +W + Sbjct: 1 MSTRIDPDVQFIREMQAAGGESLKKCYQCATCSVICP---LSPEETPFPRKEMVWAQWGM 57 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D L + ++ CH C+ CP+G P +A ++ Sbjct: 58 ----------KDKLVNDIDIWLCHNCGECSDYCPRGAKPGDLLAALRNTAYK 99 >gi|152977531|ref|YP_001377048.1| hypothetical protein Bcer98_3866 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026283|gb|ABS24053.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus cytotoxicus NVH 391-98] Length = 703 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 33/128 (25%), Gaps = 38/128 (29%) Query: 166 GLYECVMCACCSTSCPSY-------------------------------WWNSDRYLGPA 194 LY CV C C+ CP+ W + + Sbjct: 273 DLYACVECGRCTNMCPATGTGKMLSPMDLIVKLRDHLTDKGAAVTSKVPWVPAVAFHNTK 332 Query: 195 ILLQAYRWLIDSRDEFQGER-------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 A R + E + ++ ++ C T NC CP I Sbjct: 333 GNQLALRAASKGQQESAATAPLYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKI 392 Query: 248 AKIKMMLL 255 ++ L+ Sbjct: 393 IDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L D+ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLIVKLRDHLTDKG 313 >gi|138896972|ref|YP_001127425.1| Iron-sulfur-binding reductase [Geobacillus thermodenitrificans NG80-2] gi|196249792|ref|ZP_03148488.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] gi|134268485|gb|ABO68680.1| Iron-sulphur-binding reductase [Geobacillus thermodenitrificans NG80-2] gi|196210668|gb|EDY05431.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. G11MC16] Length = 698 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 36/124 (29%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----------- 214 LY CV C C++ CP+ + + L P L+ R + + R Sbjct: 272 DLYACVECGRCTSMCPA--TGTGKMLSPMDLILKLRDHLTEKGAVVTSRAPWVPTFAFKN 329 Query: 215 -----------------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ++ ++ C T NC CP I ++ Sbjct: 330 TKGNQLAFAAASEQAATIEMPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLR 389 Query: 252 MMLL 255 L+ Sbjct: 390 RYLV 393 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTSMCPATGTGKMLSPMDLILKLRDHLTEKG 312 >gi|78044753|ref|YP_360161.1| putative iron-sulfur-binding reductase [Carboxydothermus hydrogenoformans Z-2901] gi|77996868|gb|ABB15767.1| putative iron-sulfur-binding reductase [Carboxydothermus hydrogenoformans Z-2901] Length = 682 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 32/115 (27%), Gaps = 25/115 (21%) Query: 166 GLYECVMCACCSTSCPSYWWNS-----------DRYLGPAILLQAYRWLID------SRD 208 L C C C +CP+Y L + R + + Sbjct: 277 DLDSCTRCGRCQDNCPAYLTKKPLSPKKMTQDLKEALNERAPVIIARAKAELVKKGLGEE 336 Query: 209 EFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E + + + ++ C T C + CP + +++ L+ Sbjct: 337 AATSEVEGAVTRALIGEVIEEDTIWSCTTCRACQEVCPVYVEHIPKTIELRRNLV 391 >gi|295400566|ref|ZP_06810544.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977469|gb|EFG53069.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 454 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K + + R D L C+ C C +CP+Y + P + + + Sbjct: 1 MTTEKERAIMQTEFQKRMDEDELMNCMRCGFCLPTCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + + L C C CP G+ + + + ++ K Sbjct: 61 VDGLIDPDEDV------ERSLNMCLGCRACEPVCPSGVRYGHLLEEARDIIQQNK 109 >gi|85860487|ref|YP_462689.1| iron-sulphur-binding reductase [Syntrophus aciditrophicus SB] gi|85723578|gb|ABC78521.1| iron-sulphur-binding reductase [Syntrophus aciditrophicus SB] Length = 706 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 27/182 (14%) Query: 99 ACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQHRS---IEPWLKTVSPKPAK 152 A K + I + +P ++ + +HF++ + IEP + + Sbjct: 224 AAHKFFWWLHTFIALGFIAYIPFSRLLHIVTTSANHFFTDLKPTGTIEPIRDFENAETFG 283 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR----- 207 +++ L C C C CP+Y + L P L+Q + + R Sbjct: 284 VGQLEEFTWKQLFDLDACTRCGRCQDGCPAYLT--GKPLSPKKLVQDLKTYWEQRAPAFV 341 Query: 208 --------------DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 E + + + D L+ C M C ++C + I ++ Sbjct: 342 EAQKAAAAGSELQVPEAEKAMVGEVIDLHELWACTNCMYCMENCSAAIEHVPKIVNMRQY 401 Query: 254 LL 255 + Sbjct: 402 KV 403 >gi|297619334|ref|YP_003707439.1| CoB/CoM heterodisulfide reductase subunit C [Methanococcus voltae A3] gi|297378311|gb|ADI36466.1| CoB/CoM heterodisulfide reductase, subunit C [Methanococcus voltae A3] Length = 193 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 14/94 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C C C+ +CPS + ++ QA + L L Sbjct: 30 NSFKRCYQCGTCTGACPSGRLTG--FRTRKVIRQALLGS------------EELLSSDDL 75 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C T C + CP+ + I I+ + ++ Sbjct: 76 WMCTTCYECYEKCPRDVKITDLIKVIRNLASEKG 109 >gi|23100469|ref|NP_693936.1| iron-sulphur-binding reductase [Oceanobacillus iheyensis HTE831] gi|22778702|dbj|BAC14970.1| iron-sulphur-binding reductase [Oceanobacillus iheyensis HTE831] Length = 702 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 34/128 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL---------------------- 197 ++ ++ Y CV C C+ CP+ + L P ++ Sbjct: 273 EQHQMIDFYACVECGRCTDVCPASGT--GKMLSPMDIMIKVRDHLTEKGAAITGKSSWVP 330 Query: 198 -QAYRWLIDSRDEFQGERLDNLED---------PFRLYRCHTIMNCTQSCPKGLNPAKAI 247 A+ ++ E ++ L C T NC +CP I Sbjct: 331 SYAFSGSAGNQASADKEVAATIQSSSLIGDVITEEELAGCTTCRNCEDACPVNNEHVGTI 390 Query: 248 AKIKMMLL 255 ++ L+ Sbjct: 391 IDMRRYLV 398 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P + K++ L ++ Sbjct: 280 FYACVECGRCTDVCPASGTGKMLSPMDIMIKVRDHLTEKG 319 >gi|271502363|ref|YP_003335389.1| glycerol-3-phosphate dehydrogenase anaerobic subunit C [Dickeya dadantii Ech586] gi|270345918|gb|ACZ78683.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Dickeya dadantii Ech586] Length = 400 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 10/85 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+T+CP N Y GP D + R D L Sbjct: 9 FENCIKCTVCTTACPVARVNP-FYPGPKQA---------GPDGERLRRKDPALFDEALKY 58 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP + I + K Sbjct: 59 CTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|78356132|ref|YP_387581.1| glycolate oxidase, iron-sulfur subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218537|gb|ABB37886.1| glycolate oxidase, iron-sulfur subunit, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 408 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C++C C CP + + L P Q L + L+ L Sbjct: 1 MSHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAAL-----RSNPQLLEALPA 55 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +C + C ++CP+GL+ A+ ++ Sbjct: 56 RLLADKCVSCGRCEKACPQGLSVPAALGALRAE 88 >gi|119775576|ref|YP_928316.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] gi|119768076|gb|ABM00647.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 466 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 10/90 (11%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C +CP Y + G I + DE + + C Sbjct: 305 KCIRCGGCLNTCPVYRRSGGYSYGHTIPGPI--GIAVGADED--------DTHSSPWACT 354 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP + K I + + +RK Sbjct: 355 LCGSCSFVCPTKVPLDKIIFHRRRLYAERK 384 >gi|327441466|dbj|BAK17831.1| Fe-S oxidoreductase [Solibacillus silvestris StLB046] Length = 762 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 34/128 (26%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 ++++ LY CV C C+ CP+ W Sbjct: 275 QKQMLDLYACVECGRCTNMCPATGTGKMLSPMDLIVKLRDHLTFTGAVELKKKPWVPFSF 334 Query: 190 YLGPAILLQAYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + A + D + + ++ ++ C T NC CP Sbjct: 335 FNNTQGNQLAMAAGAEGAVIEDIYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDK 394 Query: 247 IAKIKMML 254 I ++ L Sbjct: 395 IIDLRRYL 402 >gi|297561544|ref|YP_003680518.1| hypothetical protein Ndas_2594 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845992|gb|ADH68012.1| protein of unknown function DUF162 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 475 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 28/181 (15%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V L+ S + W Sbjct: 233 NGRMCLTLPRTLISVVGIEKIVPTWSDLEVFLQLLPRSSTGERMNPYTSTWTGVTPGDGP 292 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGP--AIL 196 +E D + D L C+ C+ C +CP Y Y GP AIL Sbjct: 293 QEFHLVLLDNGRTDVLADTVGRQALRCIRCSACLNTCPVYERTGGHSYGSVYPGPIGAIL 352 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R + DE Y C + CP ++ + + ++ +++ Sbjct: 353 TPQLRGMSSPVDEALP------------YASSLCGACYEVCPVAIDIPEVLVHLREEVVE 400 Query: 257 R 257 R Sbjct: 401 R 401 >gi|47566181|ref|ZP_00237209.1| cysteine-rich domain family [Bacillus cereus G9241] gi|47556734|gb|EAL15065.1| cysteine-rich domain family [Bacillus cereus G9241] Length = 442 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + + + + ++R D L C+ C C +CP+Y P + + ++D Sbjct: 2 TTLNKENIQKEFKERLSEDELLNCMRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVD 61 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + L C C CP G+N + + + ++ K Sbjct: 62 GLIEPDEDVENTLNV------CLGCRACEPVCPSGVNYGHLLEEARDIINQNK 108 >gi|302344403|ref|YP_003808932.1| hypothetical protein Deba_2985 [Desulfarculus baarsii DSM 2075] gi|301641016|gb|ADK86338.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfarculus baarsii DSM 2075] Length = 399 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 12/108 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------- 210 R ++ + C C C CP+ + D L L R L R Sbjct: 8 RGQMLQIDACTGCGLCVEVCPAVAASGDGALSALARLAGLRRLNQGRAGLLARLLARRRP 67 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L ++ C C + CP GL ++ ++ + Sbjct: 68 TAQALAGFGRE--VFACTLCGRCQEVCPAGLGLKDLWISLRQDMVGQG 113 >gi|291486304|dbj|BAI87379.1| hypothetical protein BSNT_05681 [Bacillus subtilis subsp. natto BEST195] Length = 705 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 42/165 (25%), Gaps = 41/165 (24%) Query: 132 FYSQHRSIEPWLKTV--SPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPS----- 182 F+++ S K ED ++ LY CV C C+ CP+ Sbjct: 235 FFNRMESAGKLEKIDFTDETKESYGAGKIEDFRQSQLLDLYACVECGRCTNMCPATGTGK 294 Query: 183 -------------------YWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDNLE- 219 S PA + R S E L+ Sbjct: 295 MLSPMDLILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAAASAGSGSQEAAAALDY 354 Query: 220 ---------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP I ++ L+ Sbjct: 355 NPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 399 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|16080771|ref|NP_391599.1| iron-sulphur-binding reductase [Bacillus subtilis subsp. subtilis str. 168] gi|221311680|ref|ZP_03593527.1| hypothetical protein Bsubs1_20096 [Bacillus subtilis subsp. subtilis str. 168] gi|221316007|ref|ZP_03597812.1| hypothetical protein BsubsN3_20012 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320918|ref|ZP_03602212.1| hypothetical protein BsubsJ_19955 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325202|ref|ZP_03606496.1| hypothetical protein BsubsS_20116 [Bacillus subtilis subsp. subtilis str. SMY] gi|1176956|sp|P45866|FADF_BACSU RecName: Full=Uncharacterized protein fadF gi|853759|emb|CAA89867.1| ywjF [Bacillus subtilis subsp. subtilis str. 168] gi|2636255|emb|CAB15746.1| putative iron-sulphur-binding reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 705 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 42/165 (25%), Gaps = 41/165 (24%) Query: 132 FYSQHRSIEPWLKTV--SPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPS----- 182 F+++ S K ED ++ LY CV C C+ CP+ Sbjct: 235 FFNRMESAGKLEKIDFTDETKESYGAGKIEDFRQSQLLDLYACVECGRCTNMCPATGTGK 294 Query: 183 -------------------YWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDNLE- 219 S PA + R S E L+ Sbjct: 295 MLSPMDLILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAAASAGSGSQEAAAALDY 354 Query: 220 ---------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T NC CP I ++ L+ Sbjct: 355 NPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 399 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|315300299|gb|EFU59535.1| iron-sulfur cluster-binding protein [Escherichia coli MS 16-3] Length = 475 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 56/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + + ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRAMAEKGI 394 >gi|304384013|ref|ZP_07366469.1| iron-sulfur cluster binding protein [Prevotella marshii DSM 16973] gi|304334905|gb|EFM01179.1| iron-sulfur cluster binding protein [Prevotella marshii DSM 16973] Length = 457 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + ++ + E +C+ C C +CP Y Sbjct: 264 TTTYTSHFRQARPGAEMHVVLVDNGRSNIIANDE----HFETIKCIRCGACMNTCPVYRR 319 Query: 186 ---NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 S Y P + L D R + + C ++C+ CP ++ Sbjct: 320 STGYSYTYFIPGPIGVNLGMLKDPR-----------KYADNVSACSLCLSCSNVCPAKID 368 Query: 243 PAKAIAKIKMML 254 + I + + L Sbjct: 369 LGEQIYRWRQQL 380 >gi|71907393|ref|YP_284980.1| 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Dechloromonas aromatica RCB] gi|71847014|gb|AAZ46510.1| 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Dechloromonas aromatica RCB] Length = 923 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 10/135 (7%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL+ + + + P + A D + C+ C C CPS+ Sbjct: 492 DLMRRIKALFDPENRLNPGVILNDNPHAHLENLKPMPAA-EDIVDRCIECGFCEPLCPSH 550 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKG 240 L P + + R L SR GE ++ + L C C+ +CP G Sbjct: 551 RLT----LSPRQRITSVREL--SRRAAAGEPAGSVGEDYAYMGLDTCAGCGLCSTACPVG 604 Query: 241 LNPAKAIAKIKMMLL 255 ++ +++ L Sbjct: 605 IDTGDLTRRLRGRQL 619 >gi|312112343|ref|YP_003990659.1| hypothetical protein GY4MC1_3385 [Geobacillus sp. Y4.1MC1] gi|311217444|gb|ADP76048.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y4.1MC1] Length = 454 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 + K + + R D L C+ C C +CP+Y + P + + + Sbjct: 1 MTTEKERAIMQTEFQKRMDEDELMNCMRCGFCLPTCPTYIESGFQESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + + L C C CP G+ + + + ++ K Sbjct: 61 VDGLIDPDEDV------ERSLNMCLGCRACEPVCPSGVRYGHLLEEARDIIQQNK 109 >gi|156744034|ref|YP_001434163.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Roseiflexus castenholzii DSM 13941] gi|156235362|gb|ABU60145.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 416 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 10/107 (9%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + H ++ L C+ C C+ +CP D + GP + + +R Sbjct: 1 MIIPEDHIEQSLEASLDHCIKCNICTAACPVSAVT-DLFPGPKYVGPQAQRFRHARQPSP 59 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + C C + CP G+ A+ A+ + L+ + Sbjct: 60 DE---------SVDYCSGCRVCNEVCPTGVRIAELNARARARLVAER 97 >gi|319790376|ref|YP_004152009.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermovibrio ammonificans HB-1] gi|317114878|gb|ADU97368.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermovibrio ammonificans HB-1] Length = 409 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C CP + + + +L D ++ + E F L C Sbjct: 15 ERCVRCGSCRQVCPVFNVTHEEPSVARGKI----FLADMINKGKAELDKEAAHFFNL--C 68 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T + C + CP ++ K I + +++ Sbjct: 69 TTCLRCAEICPVMVDYEKIIISARAKAVEK 98 >gi|148238552|ref|YP_001223939.1| glycolate oxidase iron-sulfur subunit [Synechococcus sp. WH 7803] gi|147847091|emb|CAK22642.1| Glycolate oxidase iron-sulfur subunit [Synechococcus sp. WH 7803] Length = 446 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 6/92 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C +C SY P + + + E LD C Sbjct: 24 DPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAI-----EAGELALDATVASH-FDSC 77 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G+ + I + L ++ Sbjct: 78 LGCFACVSACPSGVRYDQLIEATRPKLNSAEL 109 >gi|149182455|ref|ZP_01860930.1| ferredoxin, 4Fe-4S [Bacillus sp. SG-1] gi|148849848|gb|EDL64023.1| ferredoxin, 4Fe-4S [Bacillus sp. SG-1] Length = 705 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 41/132 (31%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-------- 214 ++ Y CV C C+ CP+ + + L P L+ R + + R Sbjct: 270 QMIDFYACVECGRCTNMCPA--TGTGKMLSPMDLIVKLRDHLTNHGAAVTSRKPWVPTMA 327 Query: 215 -------------------------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + ++ ++ C T NC CP Sbjct: 328 FNHTKGNQLAMAAAGQGAEEAAASMAYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNEH 387 Query: 244 AKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 VDKIIDLRRYLV 399 >gi|15603305|ref|NP_246379.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Pasteurella multocida subsp. multocida str. Pm70] gi|12721818|gb|AAK03524.1| GlpC [Pasteurella multocida subsp. multocida str. Pm70] Length = 426 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 21 HHIDESFESCIKCTACTAVCPVSRQNP-VYPGPK----------QSGPDGERLRLKSAEL 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + L+R+ Sbjct: 70 YDEALKYCTNCKRCEVACPSDVKIGDLIVRARNNNLERQ 108 >gi|253576515|ref|ZP_04853844.1| glycolate oxidase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844152|gb|EES72171.1| glycolate oxidase [Paenibacillus sp. oral taxon 786 str. D14] Length = 454 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 6/129 (4%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + P + P + +D + C+ C C +CP+Y Sbjct: 4 EKHMVRKEFTSPVCGGTATLPLPHSDGNRLQPFDLDEIMNCMHCGFCLPTCPTYQQTGLE 63 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 P + + + + E ++ C C +CP G+ + Sbjct: 64 TYSPRGRIALMKGVATGQLPVNEEFEQHMN------ACLGCRACETACPAGVPYGSLLET 117 Query: 250 IKMMLLDRK 258 + ++ + K Sbjct: 118 ARQVVQETK 126 >gi|117622584|ref|YP_851497.1| hypothetical protein APECO1_1687 [Escherichia coli APEC O1] gi|115511708|gb|ABI99782.1| conserved hypothetical protein [Escherichia coli APEC O1] Length = 433 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 137 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 196 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 197 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 256 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 257 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 315 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 316 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 352 >gi|332702534|ref|ZP_08422622.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552683|gb|EGJ49727.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 439 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 10/105 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++R L C C CS+ CP +A R + Sbjct: 9 PDAIKERLAKFDLNACFTCGTCSSGCPITGTPGMEGWDTR---KALRMIAYGM------- 58 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D + D + C C +CP+G++ +K + K+ Sbjct: 59 IDEVVDSDWPWVCTGCGRCAYACPQGIDIVPIFGYMKHLRERSKV 103 >gi|307326695|ref|ZP_07605888.1| iron-sulfur cluster binding protein [Streptomyces violaceusniger Tu 4113] gi|306887679|gb|EFN18672.1| iron-sulfur cluster binding protein [Streptomyces violaceusniger Tu 4113] Length = 500 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 14/173 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W T Sbjct: 236 NGRMCLTLPETLISVVGIEKVIPTFQDLEVFLQLLPRSSTAERMNPYTSTWTGTTDADGP 295 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + D L C+ C+ C CP Y G A L Sbjct: 296 RTFHLVLLDNGRTDTLADTVGRQALRCIRCSACLNVCPVYERAGGHAYGSAYPGPIGAIL 355 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q E +L L C + CP ++ + + ++ +++ Sbjct: 356 TPQLRGTQSELDASLPYASSL-----CGACYEVCPVAIDIPEILVHLRERVVE 403 >gi|149280499|ref|ZP_01886617.1| hypothetical protein PBAL39_19404 [Pedobacter sp. BAL39] gi|149228743|gb|EDM34144.1| hypothetical protein PBAL39_19404 [Pedobacter sp. BAL39] Length = 465 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ C C +CP Y + AI L + D + L Sbjct: 297 REDFRNSLKCIRCGACMNTCPVYRRSGGHSYHTAIAGPIGSILAPNLDMKKYADLP---- 352 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +CT CP +N + + K + +++ Sbjct: 353 ----FASTLCGSCTNVCPVKINIHEQLYKWRQVIVKEG 386 >gi|313829539|gb|EFS67253.1| succinate dehydrogenase/fumarate reductase iron-sulfur subunit domain protein [Propionibacterium acnes HL063PA2] Length = 259 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 20/133 (15%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREG 83 RI+R ++K + Y +D + L+ L + + + + CREG Sbjct: 3 INLRIWRQR-NSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCREG 61 Query: 84 ICGSCGMNIDGTNT-----------LACVKDMKDIKGAIAVYPLPH----MSVIKDLVVD 128 ICG CG+ I+G C M+ + P +++DL+VD Sbjct: 62 ICGQCGVVINGVPHGGMGAAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIVD 121 Query: 129 MSHFYSQHRSIEP 141 S ++ Sbjct: 122 RSALDRVIQAGGY 134 >gi|332295907|ref|YP_004437830.1| Lactate utilization protein B/C [Thermodesulfobium narugense DSM 14796] gi|332179010|gb|AEE14699.1| Lactate utilization protein B/C [Thermodesulfobium narugense DSM 14796] Length = 722 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 9/107 (8%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLGPAILLQAYRWLIDSRDEFQ 211 LY+C+ CA C+ CP Y Y + Sbjct: 298 HGRLEMAKDPVFKELYQCIRCAACTNVCPVYALLGGHVYGHVYSGGIGALLNSFIGSKNT 357 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +++ L C T CT+ C +N + I +++ + + Sbjct: 358 ADQIQEL--------CLTCGRCTEVCAGKINIPELIVEMRKRSVKKA 396 >gi|307132948|ref|YP_003884964.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Dickeya dadantii 3937] gi|306530477|gb|ADN00408.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Dickeya dadantii 3937] Length = 400 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 28/90 (31%), Gaps = 10/90 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C+T+CP N Y GP D + R D Sbjct: 3 RPDTSFENCIKCTVCTTACPVARVNP-LYPGPKQA---------GPDGERLRRKDPALFD 52 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 53 EALKYCTNCKRCEVACPSDVKIGDIIQRAK 82 >gi|229543780|ref|ZP_04432840.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus coagulans 36D1] gi|229328200|gb|EEN93875.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus coagulans 36D1] Length = 446 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 DR D L C+ C C SCP+Y + P + + ++D E + Sbjct: 16 DRMDEDQLLNCMRCGFCLPSCPTYIESGFKESHSPRGRIALMKAVVDGVIEPDEDV---- 71 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C CP G+ + + + Sbjct: 72 --ERSLDLCLGCRACEAVCPPGVQYGHLLEEAR 102 >gi|315634458|ref|ZP_07889744.1| iron-sulfur cluster binding protein [Aggregatibacter segnis ATCC 33393] gi|315476816|gb|EFU67562.1| iron-sulfur cluster binding protein [Aggregatibacter segnis ATCC 33393] Length = 470 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 53/179 (29%), Gaps = 17/179 (9%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + G LA + + + L +V L + + E Sbjct: 229 TTLPKTHIAVMGMERLAPT----FQEVDVLITMLARSAVGARLTGYNTWLTGPRLAGETD 284 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQA 199 + +S + + C+ C C +CP+Y G P + Sbjct: 285 GPEEFHLVIVDNGRSDILASEFQEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAV 344 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ DEF+ Y C C CP + A+ I K + ++++ Sbjct: 345 ISPLLGGYDEFKEL----------PYACSLCNACNSVCPVRIPLAQLILKHREKMVEQG 393 >gi|284167079|ref|YP_003405357.1| hypothetical protein Htur_3824 [Haloterrigena turkmenica DSM 5511] gi|284016734|gb|ADB62684.1| protein of unknown function DUF224 cysteine-rich region domain protein [Haloterrigena turkmenica DSM 5511] Length = 728 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 +++ C C CS+ CP+ SDR L P ++ + + + E+ + Sbjct: 303 WKELLDQDACTKCGRCSSVCPAKA--SDRPLDPRDVILDLKSYREGLESGSEEQPIIADG 360 Query: 220 -----DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + C M C +CP + K+ ++ L D+ Sbjct: 361 GTSVIDAETMESCMACMACMDACPVEIEHLKSFTRLNRQLTDQG 404 >gi|317130795|ref|YP_004097077.1| hypothetical protein Bcell_4118 [Bacillus cellulosilyticus DSM 2522] gi|315475743|gb|ADU32346.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus cellulosilyticus DSM 2522] Length = 696 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 43/137 (31%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----- 214 D++++ LY CV C C+ CP+ ++ + L P L+ R + + R Sbjct: 266 DQKQLIDLYACVECGRCTNVCPA--TSTGKVLSPMDLIVKMRDHLTEKGAAITSRKPWLP 323 Query: 215 ------------------------------------LDNLEDPFRLYRCHTIMNCTQSCP 238 + + L+ C T NC CP Sbjct: 324 AYAFNHTKGNQLAAAAPAGEAGKEAAATAEAYDVNLIGEVITEEELWACTTCRNCEDQCP 383 Query: 239 KGLNPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 384 VMNEHVDKIIDMRRYLV 400 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 273 LYACVECGRCTNVCPATSTGKVLSPMDLIVKMRDHLTEKG 312 >gi|303245355|ref|ZP_07331639.1| protein of unknown function DUF162 [Desulfovibrio fructosovorans JJ] gi|302493204|gb|EFL53066.1| protein of unknown function DUF162 [Desulfovibrio fructosovorans JJ] Length = 719 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP Y G + + RD+ + + Sbjct: 312 RCIRCGACANVCPIYRLVGGHKYGHVYIGAIGLVATYFFHGRDKAK----------NLVQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ I +I + D Sbjct: 362 NCLNCGACKAVCAAGIDLPTLIKEIHARIQDE 393 >gi|297537619|ref|YP_003673388.1| hypothetical protein M301_0427 [Methylotenera sp. 301] gi|297256966|gb|ADI28811.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylotenera sp. 301] Length = 393 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y P +Q R + + Sbjct: 11 EADRCVACGLCLPHCPTYRKTGSEADSPRGRIQLMRAVAQEILPNNARF------NEHID 64 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + +C +CP +N + + + + +K Sbjct: 65 LCLSCRSCESACPNNVNYGALVDTTRALYIPKK 97 >gi|229542453|ref|ZP_04431513.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus coagulans 36D1] gi|229326873|gb|EEN92548.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus coagulans 36D1] Length = 714 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 29/127 (22%), Gaps = 37/127 (29%) Query: 166 GLYECVMCACCSTSCPSYWW---------------------------NSDRYLGPAILLQ 198 LY CV C C+ CP+ Sbjct: 282 DLYACVECGRCTNMCPATGTGKMLSPMDLIIKLRDHLTNYGAAVTSKAPWVPAFAFANTT 341 Query: 199 AYRWLIDSRDEFQGERLDNLE----------DPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 R +S E L+ ++ C T NC CP I Sbjct: 342 GNRLARESATRGAEEAAAALDYNPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKII 401 Query: 249 KIKMMLL 255 ++ L+ Sbjct: 402 DLRRYLV 408 >gi|229526468|ref|ZP_04415872.1| hypothetical protein VCA_000596 [Vibrio cholerae bv. albensis VL426] gi|229336626|gb|EEO01644.1| hypothetical protein VCA_000596 [Vibrio cholerae bv. albensis VL426] Length = 968 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R E L+ + + L Sbjct: 553 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRTEGENVASSELEQVFEYQGL 608 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 609 DTCAATGLCAERCPVGINTGDLVKKLR 635 >gi|94310152|ref|YP_583362.1| Iron-sulfur cluster binding protein [Cupriavidus metallidurans CH34] gi|93354004|gb|ABF08093.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cupriavidus metallidurans CH34] Length = 470 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVAVVTNEGNEGMCTIMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGEQDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLANALDLPQAA--------------TLCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + K++ ++R++ Sbjct: 376 LSDLLRKLREKQMERRL 392 >gi|325103849|ref|YP_004273503.1| protein of unknown function DUF162 [Pedobacter saltans DSM 12145] gi|324972697|gb|ADY51681.1| protein of unknown function DUF162 [Pedobacter saltans DSM 12145] Length = 456 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ CA C +CP Y + A+ L + D L Sbjct: 296 RKDFRNSLKCIRCAACFNTCPVYRRSGGHSYHTAVAGPIGSILNPNLDMKANADLP---- 351 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +C+ CP ++ + K + ++ Sbjct: 352 ----FASTLCGSCSNVCPVKIDIHDQLWKWRQEIVKEG 385 >gi|261350596|ref|ZP_05976013.1| putative 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2374] gi|288861379|gb|EFC93677.1| putative 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2374] Length = 397 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 10/86 (11%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--PFRLYR 226 C+ C C +CP Y + + + R + ++N E LY+ Sbjct: 297 WCIGCGNCIVNCPVYNAVGNEFGF--------NNYLGGRGVAMSKFIENDEKCFESGLYK 348 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C CT +CP + I K++ Sbjct: 349 CTLCGLCTINCPVSIPTNDIIEKMRK 374 >gi|148643686|ref|YP_001274199.1| fumarate reductase [Methanobrevibacter smithii ATCC 35061] gi|148552703|gb|ABQ87831.1| predicted fumarate reductase [Methanobrevibacter smithii ATCC 35061] Length = 397 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 10/86 (11%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--PFRLYR 226 C+ C C +CP Y + + + R + ++N E LY+ Sbjct: 297 WCIGCGNCIVNCPVYNAVGNEFGF--------NNYLGGRGVAMSKFIENDEKCFESGLYK 348 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C CT +CP + I K++ Sbjct: 349 CTLCGLCTINCPVSIPTNDIIEKMRK 374 >gi|298241053|ref|ZP_06964860.1| protein of unknown function DUF162 [Ktedonobacter racemifer DSM 44963] gi|297554107|gb|EFH87971.1| protein of unknown function DUF162 [Ktedonobacter racemifer DSM 44963] Length = 784 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 7/104 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 C+ CA C+ CP Y G + Sbjct: 335 RSEMRADPHFKDALRCIRCAACANICPPYQQVGGHAFGHIYSGAIGLVV-----TPFHHG 389 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ P L C + C CP + I ++ + ++K Sbjct: 390 LEAGAGPQSL--CVSCNACETVCPVEIPLPSLILDVRHRVAEKK 431 >gi|296331358|ref|ZP_06873830.1| putative iron-sulfur-binding reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676345|ref|YP_003868017.1| putative iron-sulfur-binding reductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151473|gb|EFG92350.1| putative iron-sulfur-binding reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414589|gb|ADM39708.1| putative iron-sulfur-binding reductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 705 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 46/167 (27%), Gaps = 45/167 (26%) Query: 132 FYSQHRSIEPWLKTV--SPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNS 187 F+++ S K ED ++ LY CV C C+ CP+ + Sbjct: 235 FFNRMESAGKLEKIDFTDETKESYGAGKIEDFRQSQLLDLYACVECGRCTNMCPA--TGT 292 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGER--------------------------------- 214 + L P L+ R + + R Sbjct: 293 GKMLSPMDLILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAASSAGSGSQEAAAAL 352 Query: 215 ------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ++ ++ C T NC CP I ++ L+ Sbjct: 353 DYNPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV 399 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKG 313 >gi|474049|emb|CAA53459.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 97 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 53/96 (55%), Positives = 71/96 (73%), Gaps = 2/96 (2%) Query: 102 KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--PKPAKELLQSHE 159 K D+ +YPLPHM VIKDLV D+S F+ Q+RSI+PWL+ K++ QS + Sbjct: 1 KIDTDLSKTTKIYPLPHMYVIKDLVPDLSLFFEQYRSIQPWLQKNEKLTLGEKQMFQSAD 60 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +R +IDG YEC++CACCS+SCPSYWWN+D+YLGPA+ Sbjct: 61 ERARIDGPYECILCACCSSSCPSYWWNADKYLGPAV 96 >gi|332296156|ref|YP_004438079.1| heterodisulfide reductase subunit C-like protein [Thermodesulfobium narugense DSM 14796] gi|332179259|gb|AEE14948.1| heterodisulfide reductase subunit C-like protein [Thermodesulfobium narugense DSM 14796] Length = 188 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C+ +CP + + + +I S Q E L D ++ C Sbjct: 31 DCIQCAKCAAACPMVLAGFEFF---------NKRIIQSILIGQKE---ILLDDSSIWACQ 78 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT+ CP+ + P + ++ + Sbjct: 79 ACNRCTEVCPRKVEPFGVVMAMRRSAIRE 107 >gi|116074446|ref|ZP_01471708.1| Fe-S oxidoreductase [Synechococcus sp. RS9916] gi|116069751|gb|EAU75503.1| Fe-S oxidoreductase [Synechococcus sp. RS9916] Length = 434 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D CV C C +C SY P + + + GE + Sbjct: 1 MASPDPSDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAI------DTGELSLDATV 54 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ + I + L Sbjct: 55 AGHFDSCLGCFACVSACPSGVRYDQLIEATRPRL 88 >gi|320094858|ref|ZP_08026596.1| iron-sulfur-binding reductase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978187|gb|EFW09792.1| iron-sulfur-binding reductase [Actinomyces sp. oral taxon 178 str. F0338] Length = 857 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 13/38 (34%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L+ C C + CP + I ++ + Sbjct: 474 VVSEEVLWDCTNCGACVEQCPVDIEHIDHILDLRRHQV 511 >gi|242237708|ref|YP_002985889.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Dickeya dadantii Ech703] gi|242129765|gb|ACS84067.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Dickeya dadantii Ech703] Length = 400 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 10/90 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q + +C+ C C+T+CP N D Y GP D + R D Sbjct: 3 QTDNSFEQCIKCTVCTTACPVARVNPD-YPGPKQA---------GPDGERLRRKDPSLFD 52 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 53 EALKFCTNCKRCEVACPSDVKIGDIIQRAK 82 >gi|238918345|ref|YP_002931859.1| iron-sulfur cluster-binding protein, [Edwardsiella ictaluri 93-146] gi|238867913|gb|ACR67624.1| iron-sulfur cluster-binding protein, putative [Edwardsiella ictaluri 93-146] Length = 473 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + D Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYANFKDLP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + +K I + + +++ + Sbjct: 364 LCTACDSVCPVNIPLSKLILRHRRAMVEAGL 394 >gi|110640580|ref|YP_668308.1| putative electron transport protein YkgF [Escherichia coli 536] gi|191173561|ref|ZP_03035087.1| iron-sulfur cluster binding protein [Escherichia coli F11] gi|300977273|ref|ZP_07173802.1| iron-sulfur cluster-binding protein [Escherichia coli MS 200-1] gi|110342172|gb|ABG68409.1| putative electron transport protein YkgF [Escherichia coli 536] gi|190906156|gb|EDV65769.1| iron-sulfur cluster binding protein [Escherichia coli F11] gi|300308355|gb|EFJ62875.1| iron-sulfur cluster-binding protein [Escherichia coli MS 200-1] gi|324010917|gb|EGB80136.1| iron-sulfur cluster-binding protein [Escherichia coli MS 60-1] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEISITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|159901073|ref|YP_001547320.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Herpetosiphon aurantiacus ATCC 23779] gi|159894112|gb|ABX07192.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 453 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 11/95 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C+T+CP D++ GP + QA R+ D + Sbjct: 10 EQSLDFCIKCNICTTACPVAAVT-DQFPGPKYVGPQAGRFRHDQAEHSP---------DH 59 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C + CP G+ A+ A+ + ++ Sbjct: 60 SVDYCSGCRVCNEVCPTGVPIAELNARARAQMVRE 94 >gi|46205898|ref|ZP_00047959.2| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Magnetospirillum magnetotacticum MS-1] Length = 90 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 28 KEYRIYRWNPDN--KGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 R+ R++P++ D + V VLD L IK + D +LT RRSC G+C Sbjct: 22 VTLRVRRYSPESEHGEEAYWDEFTVQAHGTD-RVLDALHKIKWEHDGSLTFRRSCAHGVC 80 Query: 86 GSCGM 90 GS Sbjct: 81 GSTRC 85 >gi|297618228|ref|YP_003703387.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297146065|gb|ADI02822.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 189 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 13/112 (11%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P PAK+ +R+ + C C C+ CP + P +++ + Sbjct: 8 PNPAKKEFIRRIERESGTEVSLCYQCGKCAAGCPVAFAMDYT---PRQVIRLLQL----- 59 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E +D ++ C T CT CP+G++ A + ++ L + + Sbjct: 60 -----ELVDEALKAESIWICATCETCTARCPRGVDIASLMDAMRREALAQGV 106 >gi|150402235|ref|YP_001329529.1| CoB--CoM heterodisulfide reductase [Methanococcus maripaludis C7] gi|150033265|gb|ABR65378.1| CoB--CoM heterodisulfide reductase [Methanococcus maripaludis C7] Length = 184 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 14/92 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS +++ IDS + D +++ Sbjct: 31 LKSCYQCGTCTGSCPSGR---RTAYRTRKVIRQALLGIDS-----------VLDSDDIWK 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + I I+ + + Sbjct: 77 CTTCYTCYERCPRDVKVTEIIKTIRNLAAKKG 108 >gi|46579263|ref|YP_010071.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120603176|ref|YP_967576.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio vulgaris DP4] gi|46448677|gb|AAS95330.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563405|gb|ABM29149.1| putative adenylylsulfate reductase-associated electron transfer protein QmoC [Desulfovibrio vulgaris DP4] gi|311233090|gb|ADP85944.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio vulgaris RCH1] Length = 384 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + L +C CA CS +CP ++ P + W + +RL L Sbjct: 18 QAVGGESLKKCYQCATCSVACPISPASN---PYPRKEMVWASWGL-------KDRL--LN 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DP ++ CH C+ CP+G P +A ++ M R Sbjct: 66 DPD-IWLCHNCGTCSDLCPRGAKPGDLLAALRNMAYQR 102 >gi|322434259|ref|YP_004216471.1| iron-sulfur cluster binding protein [Acidobacterium sp. MP5ACTX9] gi|321161986|gb|ADW67691.1| iron-sulfur cluster binding protein [Acidobacterium sp. MP5ACTX9] Length = 492 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 11/91 (12%) Query: 169 ECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YR 226 C+ C C +CP Y Y L ++E L Y Sbjct: 314 NCIRCGACQNACPVYRQTGGHAYGSVYAGPIGAILTPQ---------LQHMEHAQSLPYA 364 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP +N + + ++ ++ + Sbjct: 365 SSLCGACYEVCPVKINIPEVLIHLRNKVVKQ 395 >gi|134045582|ref|YP_001097068.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcus maripaludis C5] gi|159905986|ref|YP_001549648.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcus maripaludis C6] gi|132663207|gb|ABO34853.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcus maripaludis C5] gi|159887479|gb|ABX02416.1| CoB--CoM heterodisulfide reductase, subunit C [Methanococcus maripaludis C6] Length = 184 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 14/92 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS +++ IDS + D +++ Sbjct: 31 LKSCYQCGTCTGSCPSGR---RTAYRTRKVIRQALLGIDS-----------VLDSDDIWK 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + I I+ + + Sbjct: 77 CTTCYTCYERCPRDVKVTEIIKTIRNLAAKKG 108 >gi|291281207|ref|YP_003498025.1| Iron-sulfur cluster binding protein [Escherichia coli O55:H7 str. CB9615] gi|209745020|gb|ACI70817.1| hypothetical protein ECs0345 [Escherichia coli] gi|290761080|gb|ADD55041.1| Iron-sulfur cluster binding protein [Escherichia coli O55:H7 str. CB9615] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|167586737|ref|ZP_02379125.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia ubonensis Bu] Length = 470 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GLDRTLDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R++ Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERRL 392 >gi|284163337|ref|YP_003401616.1| hypothetical protein Htur_0042 [Haloterrigena turkmenica DSM 5511] gi|284012992|gb|ADB58943.1| protein of unknown function DUF224 cysteine-rich region domain protein [Haloterrigena turkmenica DSM 5511] Length = 738 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 10/154 (6%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--C 170 + +PH ++ ++ ++ L V +S +D + L + C Sbjct: 263 IAWIPHAGKPFHMLSSFANVVTRDEKAGRRLPNVPSDLDATNAESIDDFTWKEILDQDAC 322 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL------ 224 C CS+ CP+ S+R L P ++ R + + E+ + + Sbjct: 323 TKCGRCSSVCPAKA--SNRPLDPRDVILDLRKYREELEAGGEEKPIIADGGTSVINTETM 380 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C M C +CP + ++ ++ + D+ Sbjct: 381 ESCMACMACMDACPVEIEHLQSFTRLNRQMTDQG 414 >gi|168761960|ref|ZP_02786967.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4501] gi|217324305|ref|ZP_03440389.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. TW14588] gi|189367694|gb|EDU86110.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4501] gi|217320526|gb|EEC28950.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. TW14588] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|154508982|ref|ZP_02044624.1| hypothetical protein ACTODO_01498 [Actinomyces odontolyticus ATCC 17982] gi|153798616|gb|EDN81036.1| hypothetical protein ACTODO_01498 [Actinomyces odontolyticus ATCC 17982] Length = 427 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 14/100 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL-LQAYRWLIDSRDEFQGERLDNL 218 D L CV C C T CP D + GP QA R+ R D Sbjct: 24 DAALRASLDSCVKCTICETQCPVMRVT-DLFAGPKYSGPQAERF-----------RKDGQ 71 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + C+ CP+G+ + I + + Sbjct: 72 MVDKSIDYCSSCGTCSLVCPQGVKVTEIIHH-RRTAMKEA 110 >gi|323976213|gb|EGB71306.1| iron-sulfur cluster-binding protein [Escherichia coli TW10509] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYEDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|15800021|ref|NP_286033.1| hypothetical protein Z0385 [Escherichia coli O157:H7 EDL933] gi|15829599|ref|NP_308372.1| hypothetical protein ECs0345 [Escherichia coli O157:H7 str. Sakai] gi|168749166|ref|ZP_02774188.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4113] gi|168755869|ref|ZP_02780876.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4401] gi|168769670|ref|ZP_02794677.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4486] gi|168775384|ref|ZP_02800391.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4196] gi|168782667|ref|ZP_02807674.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4076] gi|168788587|ref|ZP_02813594.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC869] gi|168799764|ref|ZP_02824771.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC508] gi|195937797|ref|ZP_03083179.1| hypothetical protein EscherichcoliO157_15339 [Escherichia coli O157:H7 str. EC4024] gi|208807074|ref|ZP_03249411.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4206] gi|208815834|ref|ZP_03257013.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4045] gi|208823068|ref|ZP_03263386.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4042] gi|209398208|ref|YP_002268936.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4115] gi|254791476|ref|YP_003076313.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. TW14359] gi|261223778|ref|ZP_05938059.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. FRIK2000] gi|261255987|ref|ZP_05948520.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. FRIK966] gi|12513108|gb|AAG54641.1|AE005208_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13359802|dbj|BAB33768.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769039|gb|EDU32883.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4196] gi|188016500|gb|EDU54622.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4113] gi|188999843|gb|EDU68829.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4076] gi|189356878|gb|EDU75297.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4401] gi|189361318|gb|EDU79737.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4486] gi|189371660|gb|EDU90076.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC869] gi|189377872|gb|EDU96288.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC508] gi|208726875|gb|EDZ76476.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732482|gb|EDZ81170.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737261|gb|EDZ84945.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4042] gi|209159608|gb|ACI37041.1| iron-sulfur cluster binding protein [Escherichia coli O157:H7 str. EC4115] gi|209745014|gb|ACI70814.1| hypothetical protein ECs0345 [Escherichia coli] gi|209745016|gb|ACI70815.1| hypothetical protein ECs0345 [Escherichia coli] gi|209745018|gb|ACI70816.1| hypothetical protein ECs0345 [Escherichia coli] gi|209745022|gb|ACI70818.1| hypothetical protein ECs0345 [Escherichia coli] gi|254590876|gb|ACT70237.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. TW14359] gi|320192363|gb|EFW67007.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli O157:H7 str. EC1212] gi|320638586|gb|EFX08294.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. G5101] gi|320644046|gb|EFX13126.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H- str. 493-89] gi|320649328|gb|EFX17879.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H- str. H 2687] gi|320656892|gb|EFX24752.1| amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662469|gb|EFX29858.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O55:H7 str. USDA 5905] gi|320665285|gb|EFX32375.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O157:H7 str. LSU-61] gi|326343417|gb|EGD67181.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli O157:H7 str. 1044] gi|326347238|gb|EGD70964.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli O157:H7 str. 1125] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|146301947|ref|YP_001196538.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Flavobacterium johnsoniae UW101] gi|146156365|gb|ABQ07219.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Flavobacterium johnsoniae UW101] Length = 467 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 8/96 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ C C +CP Y + A+ L + D + L Sbjct: 298 REDFRNSLKCIRCGACMNTCPVYRRSGGHSYHNAVAGPIGSILAPNLDMSKNADLP---- 353 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +CT CP ++ + K + +L+ Sbjct: 354 ----FASTLCGSCTNVCPVKIDIHDQLYKWRQVLVK 385 >gi|320197235|gb|EFW71851.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli WV_060327] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|300824496|ref|ZP_07104607.1| iron-sulfur cluster-binding protein [Escherichia coli MS 119-7] gi|331666606|ref|ZP_08367480.1| iron-sulfur cluster-binding protein [Escherichia coli TA271] gi|331675954|ref|ZP_08376671.1| iron-sulfur cluster-binding protein [Escherichia coli H591] gi|300522970|gb|EFK44039.1| iron-sulfur cluster-binding protein [Escherichia coli MS 119-7] gi|331065830|gb|EGI37714.1| iron-sulfur cluster-binding protein [Escherichia coli TA271] gi|331076514|gb|EGI47791.1| iron-sulfur cluster-binding protein [Escherichia coli H591] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|293192391|ref|ZP_06609502.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Actinomyces odontolyticus F0309] gi|292820306|gb|EFF79300.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Actinomyces odontolyticus F0309] Length = 427 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 14/100 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL-LQAYRWLIDSRDEFQGERLDNL 218 D L CV C C T CP D + GP QA R+ R D Sbjct: 24 DAALRASLDSCVKCTICETQCPVMRVT-DLFAGPKYSGPQAERF-----------RKDGQ 71 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + C+ CP+G+ + I + + Sbjct: 72 MVDKSIDYCSSCGTCSLVCPQGVKVTEIIHH-RRTAMKEA 110 >gi|303247143|ref|ZP_07333418.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio fructosovorans JJ] gi|302491569|gb|EFL51454.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio fructosovorans JJ] Length = 100 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 EC C C+ CP + R + + + A L L++ L+RC Sbjct: 21 AECFNCGTCAAICPLVSEHFPRKMIRYVQIGAEDLL--------------LQNAQELWRC 66 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CTQ+CP+G NP + I +K ++ + Sbjct: 67 LHCGLCTQTCPRGANPGEVILTLKRHVVAK 96 >gi|257057651|ref|YP_003135483.1| (4Fe-4S) cluster-containing protein [Saccharomonospora viridis DSM 43017] gi|256587523|gb|ACU98656.1| (4Fe-4S) cluster-containing protein [Saccharomonospora viridis DSM 43017] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 47/180 (26%), Gaps = 23/180 (12%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 229 NGRMCLTLPETLITVMGIEKLVPTWRDLEVFLQLLPRSSTAERMNPYTSVWSGVTPGDGP 288 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 E D + L C+ C+ C CP Y Y GP + Sbjct: 289 DEFHLVLLDNGRTAALADEVGRQALRCIRCSACLNVCPVYERTGGQAYGSVYPGPIGAIL 348 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + D DE Y C + CP ++ + + ++ + + Sbjct: 349 TPQLVGDMGDEQAASLP---------YASSLCGACYEVCPVRIDIPEVLTHLRAQAVRAR 399 >gi|189423640|ref|YP_001950817.1| hypothetical protein Glov_0570 [Geobacter lovleyi SZ] gi|189419899|gb|ACD94297.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter lovleyi SZ] Length = 655 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 12/113 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WLID 205 +++ + C C C +CP+ + L P ++ + L Sbjct: 257 NRVDGYTWKELLDAFSCTECGRCQMACPADQT--GKPLNPRRVIAQLKHNLMANGPLLKQ 314 Query: 206 SRDEFQG--ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + D ++ C T C QSCP + + ++ L++ Sbjct: 315 GQPAGTPLIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIPLRRHLVE 367 >gi|220915131|ref|YP_002490435.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219952985|gb|ACL63369.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 711 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 16/112 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW--------------NSDRYLGPAILLQAYRWLIDS 206 ++ +Y C C C T CP+Y + + PA+ A Sbjct: 287 WKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEVNRSIRHHLAEVAPALTALARAKDPAV 346 Query: 207 RDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R+ G + + P + C T C +CP + + ++ + Sbjct: 347 REAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQ 398 >gi|197120429|ref|YP_002132380.1| hypothetical protein AnaeK_0008 [Anaeromyxobacter sp. K] gi|196170278|gb|ACG71251.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter sp. K] Length = 711 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 16/112 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW--------------NSDRYLGPAILLQAYRWLIDS 206 ++ +Y C C C T CP+Y + + PA+ A Sbjct: 287 WKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEVNRSIRHHLAEVAPALTALARAKDPAV 346 Query: 207 RDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R+ G + + P + C T C +CP + + ++ + Sbjct: 347 REAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQ 398 >gi|86156438|ref|YP_463223.1| hypothetical protein Adeh_0008 [Anaeromyxobacter dehalogenans 2CP-C] gi|85772949|gb|ABC79786.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 711 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 16/112 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW--------------NSDRYLGPAILLQAYRWLIDS 206 ++ +Y C C C T CP+Y + + PA+ A Sbjct: 287 WKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEVNRSIRHHLAEVAPALTALARAKDPAV 346 Query: 207 RDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R+ G + + P + C T C +CP + + ++ + Sbjct: 347 REAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQ 398 >gi|205375421|ref|ZP_03228210.1| iron-sulfur oxidoreductase [Bacillus coahuilensis m4-4] Length = 706 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 38/135 (28%), Gaps = 41/135 (30%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGE---- 213 D+ ++ Y CV C C+ CP+ + + L P L+ R + + Sbjct: 268 DQLQMIDFYACVECGRCTNMCPA--TGTGKMLSPMDLITKLRDHLTMHGAAVTSKQPWVP 325 Query: 214 ---------------------------------RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++ ++ C T NC CP Sbjct: 326 TFAFSGTKGNQIALASAGAGANEAAAAIEYAPSLIGDVITEEEIWACTTCRNCEDQCPVM 385 Query: 241 LNPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 NEHVDKIIDLRRYLV 400 >gi|170681838|ref|YP_001742443.1| iron-sulfur cluster binding protein [Escherichia coli SMS-3-5] gi|300934892|ref|ZP_07149946.1| iron-sulfur cluster-binding protein [Escherichia coli MS 21-1] gi|301020056|ref|ZP_07184186.1| iron-sulfur cluster-binding protein [Escherichia coli MS 69-1] gi|170519556|gb|ACB17734.1| iron-sulfur cluster binding protein [Escherichia coli SMS-3-5] gi|300398933|gb|EFJ82471.1| iron-sulfur cluster-binding protein [Escherichia coli MS 69-1] gi|300459798|gb|EFK23291.1| iron-sulfur cluster-binding protein [Escherichia coli MS 21-1] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|222444831|ref|ZP_03607346.1| hypothetical protein METSMIALI_00444 [Methanobrevibacter smithii DSM 2375] gi|222434396|gb|EEE41561.1| hypothetical protein METSMIALI_00444 [Methanobrevibacter smithii DSM 2375] Length = 279 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 10/86 (11%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--PFRLYR 226 C+ C C +CP Y + + + R + ++N E LY+ Sbjct: 179 WCIGCGNCIVNCPVYNAVGNEFGF--------NNYLGGRGVAMSKFIENDEKCFESGLYK 230 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C CT +CP + I K++ Sbjct: 231 CTLCGLCTINCPVSIPTNDIIEKMRK 256 >gi|89899017|ref|YP_521488.1| Iron-sulfur cluster-binding protein [Rhodoferax ferrireducens T118] gi|89343754|gb|ABD67957.1| Iron-sulfur cluster binding protein [Rhodoferax ferrireducens T118] Length = 477 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 26/94 (27%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D + Sbjct: 316 KCIRCGACMNHCPVYARIGGHAYGTTYPGPIGAIISPHML--GLDATYPLAFAS------ 367 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ R Sbjct: 368 ----TLCGACVEVCPVKIPITDILVRLRNEAQAR 397 >gi|320175588|gb|EFW50682.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Shigella dysenteriae CDC 74-1112] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|320106689|ref|YP_004182279.1| iron-sulfur cluster-binding protein [Terriglobus saanensis SP1PR4] gi|319925210|gb|ADV82285.1| iron-sulfur cluster binding protein [Terriglobus saanensis SP1PR4] Length = 488 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ CA C +CP Y Y + L Y Sbjct: 314 QCIRCAACLNACPVYRQTGGHAYGSVYAGPIGAILTPQMMGMEHAQSLP--------YAS 365 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP +N + + ++ +++R Sbjct: 366 SLCGACYEVCPVKINIPEVLIHLRHKVVER 395 >gi|297617585|ref|YP_003702744.1| hypothetical protein Slip_1416 [Syntrophothermus lipocalidus DSM 12680] gi|297145422|gb|ADI02179.1| protein of unknown function DUF224 cysteine-rich region domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 709 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 31/176 (17%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLY 168 + + +P + V +++F + + ++ ED D L Sbjct: 240 LFIALVPFTKLWHIFVSMVNYFTRDMGPSACRMVYNIEEAESFGVEKIEDFTWKDIIDLD 299 Query: 169 ECVMCACCSTSCPSY-------------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 C+ C C +CP+Y + A L A + DE + Sbjct: 300 ACIRCGRCQENCPAYLTGKHLNPKLTLIQAMKQHWDAKAPYLIAAKDAGHHADEAAEMAM 359 Query: 216 DNLEDP----------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D ++ C C + CP + I +++ L+ Sbjct: 360 TAEADEVKPVMEQNLIYDVVTTDVIWDCTNCRACMEHCPMFIEHIPKIIEMRRNLV 415 >gi|251771060|gb|EES51644.1| D-lactate dehydrogenase (Cytochrome) [Leptospirillum ferrodiazotrophum] Length = 941 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 14/129 (10%) Query: 126 VVDMSHFYSQHRSIEPWLKTVS---PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 V Y R ++ P + E+ C C C+T CPS Sbjct: 488 QVYGEEIYEIFREVKRLFDPRGLLAPGVKISEVSFLENLDLDRVARPCATCGKCNTVCPS 547 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + G Y+ L D L + D L C +C +CP G++ Sbjct: 548 FDVLRTESQGARGW---YQILADP-------ALAAVSDTI-LDGCLNCKSCRATCPAGVD 596 Query: 243 PAKAIAKIK 251 ++AI + Sbjct: 597 VSRAILDAR 605 >gi|229514393|ref|ZP_04403854.1| hypothetical protein VCB_002043 [Vibrio cholerae TMA 21] gi|229348373|gb|EEO13331.1| hypothetical protein VCB_002043 [Vibrio cholerae TMA 21] Length = 968 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 7/108 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + + + C+ C C CPS L P + YR L Sbjct: 532 NEDKHSHIRNLKPMPAADNLVDRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRR 587 Query: 207 RDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R L+ + + L C C + CP G+N + K++ Sbjct: 588 RTAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGINTGDLVKKLR 635 >gi|159900971|ref|YP_001547218.1| hypothetical protein Haur_4458 [Herpetosiphon aurantiacus ATCC 23779] gi|159894010|gb|ABX07090.1| protein of unknown function DUF224 cysteine-rich region domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 752 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 47/183 (25%), Gaps = 43/183 (23%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 I PL + +D + + +E S ++ Sbjct: 276 FRHIFYTPLNTLFRDRDPKGALDRIPNMEEELE-----KDEPKLGITTLSDFSWKRRMDF 330 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-----RD-------------- 208 C+ C C +CP++ S+ L P L+ L+ RD Sbjct: 331 DACMRCGRCQDNCPAFASGSE--LSPKWLITKMSDLMHGGPVMKRDGTVVMVQPAGATAT 388 Query: 209 -------------EFQGERLDN----LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E E L + L+ C T C CP + I + Sbjct: 389 APTTSNGVKIELLEGTPETLPLYEHGIVTENELWACTTCRACMTECPATIEHVDDIIDFR 448 Query: 252 MML 254 L Sbjct: 449 RNL 451 >gi|33152320|ref|NP_873673.1| putative iron-sulfur electron transport protein [Haemophilus ducreyi 35000HP] gi|33148543|gb|AAP96062.1| putative iron-sulfur electron transport protein [Haemophilus ducreyi 35000HP] Length = 469 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP+Y G P + L+ DEF+ Y Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAVISPLLGGYDEFKDL----------PY 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP + A+ I K + L++ Sbjct: 362 ACSLCTACNSVCPVKIPLAQLILKHREKLVEEG 394 >gi|24111702|ref|NP_706212.1| hypothetical protein SF0259 [Shigella flexneri 2a str. 301] gi|30061828|ref|NP_835999.1| hypothetical protein S0280 [Shigella flexneri 2a str. 2457T] gi|24050480|gb|AAN41919.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040070|gb|AAP15804.1| hypothetical protein S0280 [Shigella flexneri 2a str. 2457T] gi|281599622|gb|ADA72606.1| putative electron transport protein ykgF [Shigella flexneri 2002017] gi|313646660|gb|EFS11119.1| iron-sulfur cluster binding protein [Shigella flexneri 2a str. 2457T] gi|332761732|gb|EGJ92011.1| iron-sulfur cluster binding protein [Shigella flexneri 2747-71] gi|332764423|gb|EGJ94656.1| iron-sulfur cluster binding protein [Shigella flexneri K-671] gi|332768556|gb|EGJ98738.1| iron-sulfur cluster binding protein [Shigella flexneri 2930-71] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|293413554|ref|ZP_06656203.1| iron-sulfur cluster-binding protein [Escherichia coli B185] gi|291433612|gb|EFF06585.1| iron-sulfur cluster-binding protein [Escherichia coli B185] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|16128292|ref|NP_414841.1| predicted electron transport protein with ferridoxin-like domai [Escherichia coli str. K-12 substr. MG1655] gi|89107181|ref|AP_000961.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli str. K-12 substr. W3110] gi|170079931|ref|YP_001729251.1| amino acid dehydrogenase [Escherichia coli str. K-12 substr. DH10B] gi|194438226|ref|ZP_03070318.1| iron-sulfur cluster binding protein [Escherichia coli 101-1] gi|253774704|ref|YP_003037535.1| iron-sulfur cluster binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160382|ref|YP_003043490.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli B str. REL606] gi|256024067|ref|ZP_05437932.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia sp. 4_1_40B] gi|300927630|ref|ZP_07143200.1| iron-sulfur cluster-binding protein [Escherichia coli MS 187-1] gi|300946434|ref|ZP_07160709.1| iron-sulfur cluster-binding protein [Escherichia coli MS 116-1] gi|300955487|ref|ZP_07167855.1| iron-sulfur cluster-binding protein [Escherichia coli MS 175-1] gi|301018074|ref|ZP_07182628.1| iron-sulfur cluster-binding protein [Escherichia coli MS 196-1] gi|307136956|ref|ZP_07496312.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli H736] gi|331640825|ref|ZP_08341960.1| iron-sulfur cluster-binding protein [Escherichia coli H736] gi|2494447|sp|P77536|YKGF_ECOLI RecName: Full=Uncharacterized electron transport protein ykgF gi|1657506|gb|AAB18034.1| hypothetical protein [Escherichia coli str. K-12 substr. MG1655] gi|1786498|gb|AAC73410.1| predicted electron transport protein with ferridoxin-like domai [Escherichia coli str. K-12 substr. MG1655] gi|85674451|dbj|BAE76091.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli str. K12 substr. W3110] gi|169887766|gb|ACB01473.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli str. K-12 substr. DH10B] gi|194422890|gb|EDX38885.1| iron-sulfur cluster binding protein [Escherichia coli 101-1] gi|242376098|emb|CAQ30784.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli BL21(DE3)] gi|253325748|gb|ACT30350.1| iron-sulfur cluster binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972283|gb|ACT37954.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli B str. REL606] gi|253976492|gb|ACT42162.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli BL21(DE3)] gi|260450500|gb|ACX40922.1| iron-sulfur cluster binding protein [Escherichia coli DH1] gi|299882600|gb|EFI90811.1| iron-sulfur cluster-binding protein [Escherichia coli MS 196-1] gi|300317626|gb|EFJ67410.1| iron-sulfur cluster-binding protein [Escherichia coli MS 175-1] gi|300453895|gb|EFK17515.1| iron-sulfur cluster-binding protein [Escherichia coli MS 116-1] gi|300464302|gb|EFK27795.1| iron-sulfur cluster-binding protein [Escherichia coli MS 187-1] gi|309700573|emb|CBI99869.1| putative electron transport protein [Escherichia coli ETEC H10407] gi|315134993|dbj|BAJ42152.1| predicted electron transport protein with ferridoxin-like domai [Escherichia coli DH1] gi|315616765|gb|EFU97382.1| iron-sulfur cluster binding protein [Escherichia coli 3431] gi|323938714|gb|EGB34962.1| iron-sulfur cluster-binding protein [Escherichia coli E1520] gi|323943388|gb|EGB39541.1| iron-sulfur cluster-binding protein [Escherichia coli E482] gi|323963511|gb|EGB59071.1| iron-sulfur cluster-binding protein [Escherichia coli H489] gi|323972484|gb|EGB67691.1| iron-sulfur cluster-binding protein [Escherichia coli TA007] gi|331037623|gb|EGI09843.1| iron-sulfur cluster-binding protein [Escherichia coli H736] gi|332341669|gb|AEE55003.1| iron-sulfur cluster-binding protein YkgF [Escherichia coli UMNK88] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|300903433|ref|ZP_07121360.1| iron-sulfur cluster-binding protein [Escherichia coli MS 84-1] gi|301301451|ref|ZP_07207586.1| iron-sulfur cluster-binding protein [Escherichia coli MS 124-1] gi|300404575|gb|EFJ88113.1| iron-sulfur cluster-binding protein [Escherichia coli MS 84-1] gi|300842948|gb|EFK70708.1| iron-sulfur cluster-binding protein [Escherichia coli MS 124-1] gi|315256127|gb|EFU36095.1| iron-sulfur cluster-binding protein [Escherichia coli MS 85-1] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|293408453|ref|ZP_06652292.1| iron-sulfur cluster-binding protein [Escherichia coli B354] gi|291471631|gb|EFF14114.1| iron-sulfur cluster-binding protein [Escherichia coli B354] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|289581379|ref|YP_003479845.1| hypothetical protein Nmag_1707 [Natrialba magadii ATCC 43099] gi|289530932|gb|ADD05283.1| protein of unknown function DUF224 cysteine-rich region domain protein [Natrialba magadii ATCC 43099] Length = 737 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++I C C CS+ CP+ SDR L P ++ + + D+ E+ + Sbjct: 312 WKEILDQDACTKCGRCSSVCPAKA--SDRPLDPRNVILDLKKYREELDDGGDEKPIIADG 369 Query: 221 PFRL------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C M C +CP + ++ ++ + D+ Sbjct: 370 GTSVINTETMESCMACMACMDACPVEIEHLQSFTRLNRQMTDQG 413 >gi|219871477|ref|YP_002475852.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parasuis SH0165] gi|219691681|gb|ACL32904.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parasuis SH0165] Length = 425 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 14/113 (12%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + + + C+ C C+ CP N Y GP S Sbjct: 9 EQAQQNTHSAVVHHGFDESFESCIKCTACTAVCPVSRNNPM-YPGPK----------QSG 57 Query: 208 DEFQGERLD--NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + RL L D L C C +CP + I + + LDR+ Sbjct: 58 PDGERLRLKSPELYDE-ALKYCTNCKRCEVACPSDVKIGDIIVRARNRHLDRQ 109 >gi|167855914|ref|ZP_02478663.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parasuis 29755] gi|167852951|gb|EDS24216.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parasuis 29755] Length = 425 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 12/112 (10%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + + + C+ C C+ CP N Y GP S Sbjct: 9 EQAQQNTHSAVVHHGFDESFESCIKCTACTAVCPVSRNNPM-YPGPK----------QSG 57 Query: 208 DEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + RL + E L C C +CP + I + + LDR+ Sbjct: 58 PDGERLRLKSSELYDEALKYCTNCKRCEVACPSDVKIGDIIVRARNRHLDRQ 109 >gi|225022826|ref|ZP_03712018.1| hypothetical protein CORMATOL_02871 [Corynebacterium matruchotii ATCC 33806] gi|224944433|gb|EEG25642.1| hypothetical protein CORMATOL_02871 [Corynebacterium matruchotii ATCC 33806] Length = 520 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 45/176 (25%), Gaps = 16/176 (9%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + V L+ S + W Sbjct: 240 NGRMCLTLPETLISVMGIEKILPTFRDYEVFLQLLPRSSTGERMNPYTSLWSGVTENDGP 299 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D + + + C+ C+ C CP Y G L Sbjct: 300 KNFHIVLVDNGRTAAMSDEIGREALKCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAIL 359 Query: 204 IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Q +++ DP Y C + CP + A+ +++ + Sbjct: 360 -----TPQLTGINDAHDPNGYLPYASSLCGRCNEVCPVKIPITDALLELRHKKVKE 410 >gi|331681695|ref|ZP_08382328.1| iron-sulfur cluster-binding protein [Escherichia coli H299] gi|281177491|dbj|BAI53821.1| conserved hypothetical protein [Escherichia coli SE15] gi|331080897|gb|EGI52062.1| iron-sulfur cluster-binding protein [Escherichia coli H299] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|305682161|ref|ZP_07404965.1| iron-sulfur cluster-binding protein [Corynebacterium matruchotii ATCC 14266] gi|305658634|gb|EFM48137.1| iron-sulfur cluster-binding protein [Corynebacterium matruchotii ATCC 14266] Length = 524 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 45/176 (25%), Gaps = 16/176 (9%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + V L+ S + W Sbjct: 244 NGRMCLTLPETLISVMGIEKILPTFRDYEVFLQLLPRSSTGERMNPYTSLWSGVTENDGP 303 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D + + + C+ C+ C CP Y G L Sbjct: 304 KNFHIVLVDNGRTAAMSDEIGREALKCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAIL 363 Query: 204 IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Q +++ DP Y C + CP + A+ +++ + Sbjct: 364 -----TPQLTGINDAHDPNGYLPYASSLCGRCNEVCPVKIPITDALLELRHKKVKE 414 >gi|218557227|ref|YP_002390140.1| oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli S88] gi|218688188|ref|YP_002396400.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli ED1a] gi|237707701|ref|ZP_04538182.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|331656372|ref|ZP_08357334.1| iron-sulfur cluster-binding protein [Escherichia coli TA206] gi|218363996|emb|CAR01661.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli S88] gi|218425752|emb|CAR06556.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli ED1a] gi|226898911|gb|EEH85170.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294489451|gb|ADE88207.1| iron-sulfur cluster binding protein [Escherichia coli IHE3034] gi|307628212|gb|ADN72516.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli UM146] gi|315287735|gb|EFU47138.1| iron-sulfur cluster-binding protein [Escherichia coli MS 110-3] gi|323953069|gb|EGB48937.1| iron-sulfur cluster-binding protein [Escherichia coli H252] gi|323958733|gb|EGB54434.1| iron-sulfur cluster-binding protein [Escherichia coli H263] gi|331054620|gb|EGI26629.1| iron-sulfur cluster-binding protein [Escherichia coli TA206] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|218552869|ref|YP_002385782.1| putative oxidoreductase subunit [Escherichia coli IAI1] gi|218693766|ref|YP_002401433.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli 55989] gi|218350498|emb|CAU96186.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli 55989] gi|218359637|emb|CAQ97178.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli IAI1] gi|320201109|gb|EFW75692.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli EC4100B] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|91209376|ref|YP_539362.1| putative electron transport protein YkgF [Escherichia coli UTI89] gi|91070950|gb|ABE05831.1| putative electron transport protein YkgF [Escherichia coli UTI89] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|193064308|ref|ZP_03045390.1| iron-sulfur cluster binding protein [Escherichia coli E22] gi|194427579|ref|ZP_03060127.1| iron-sulfur cluster binding protein [Escherichia coli B171] gi|260842512|ref|YP_003220290.1| putative amino acid dehydrogenase [Escherichia coli O103:H2 str. 12009] gi|192928970|gb|EDV82582.1| iron-sulfur cluster binding protein [Escherichia coli E22] gi|194414349|gb|EDX30623.1| iron-sulfur cluster binding protein [Escherichia coli B171] gi|257757659|dbj|BAI29156.1| predicted amino acid dehydrogenase [Escherichia coli O103:H2 str. 12009] gi|323160339|gb|EFZ46291.1| iron-sulfur cluster binding protein [Escherichia coli E128010] Length = 475 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|256811065|ref|YP_003128434.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus fervens AG86] gi|256794265|gb|ACV24934.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus fervens AG86] Length = 186 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ SCPS + R + R ++ D+ + D ++ C T Sbjct: 36 CYQCGTCTGSCPSGRRTAYR------TRKVLRKVLLGLDD--------VLDSDDIWYCTT 81 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+ + + I ++ + + Sbjct: 82 CYTCYERCPRDVKITEIIKTLRNIAAQKG 110 >gi|148658534|ref|YP_001278739.1| hypothetical protein RoseRS_4457 [Roseiflexus sp. RS-1] gi|148570644|gb|ABQ92789.1| protein of unknown function DUF224, cysteine-rich region domain protein [Roseiflexus sp. RS-1] Length = 730 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 56/213 (26%), Gaps = 51/213 (23%) Query: 93 DGTNTLACVKDMKDIKGAI----AVYPLPHMSVIKDLVVDMSHFYSQHRS------IEPW 142 DG+ + + + +P + + ++ F+ I Sbjct: 220 DGSPVGLGLHLFFWFSHTLASFAFIASIPFSKLQHIIYTPLNTFFRDLEPKGALTPIPNL 279 Query: 143 LKTVSPKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYW---------------- 184 + + + + D C+ C C + CP+Y Sbjct: 280 EAEIEKDEPRLGVATLADFTWKQRLDFDACMQCGRCQSKCPAYASGSQLSPKFLITKMAN 339 Query: 185 -------WNSDRYLGPAILL------------QAYRWLIDSRDEFQGERLDNLE----DP 221 D LG A + A R + + E E L +E Sbjct: 340 LQRGEPVLLHDGSLGRAHTVLSTDQYNEAPKPIAERTPVYATIEGDRETLPLVEHGIYTE 399 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C T C + CP + I ++ L Sbjct: 400 NEIWSCTTCRACMEECPAMIEHVDLIVDVRRNL 432 >gi|193068637|ref|ZP_03049598.1| iron-sulfur cluster binding protein [Escherichia coli E110019] gi|209917515|ref|YP_002291599.1| hypothetical protein ECSE_0324 [Escherichia coli SE11] gi|293418379|ref|ZP_06660814.1| iron-sulfur cluster-binding protein [Escherichia coli B088] gi|192958000|gb|EDV88442.1| iron-sulfur cluster binding protein [Escherichia coli E110019] gi|209910774|dbj|BAG75848.1| conserved hypothetical protein [Escherichia coli SE11] gi|291324907|gb|EFE64322.1| iron-sulfur cluster-binding protein [Escherichia coli B088] gi|323945486|gb|EGB41540.1| iron-sulfur cluster-binding protein [Escherichia coli H120] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLIAMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|187732922|ref|YP_001879052.1| iron-sulfur cluster binding protein [Shigella boydii CDC 3083-94] gi|187429914|gb|ACD09188.1| iron-sulfur cluster binding protein [Shigella boydii CDC 3083-94] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHIDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|218438671|ref|YP_002377000.1| hypothetical protein PCC7424_1697 [Cyanothece sp. PCC 7424] gi|218171399|gb|ACK70132.1| conserved hypothetical protein [Cyanothece sp. PCC 7424] Length = 246 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 10/121 (8%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 I K + +D G+ C+ C C+ CP+ +N Sbjct: 1 MTRIMAKTAIKEVNMGKLFDELEKDILYQHGMNACLNCGVCTAVCPAAEFND-------- 52 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R ++++ E ++ L +++ C +C CP+G + A I ++ + + Sbjct: 53 --YSPREVMNTVQSEDDELIEELLKSDKIWYCGQCFSCKTRCPRGNSTASVILALRRLSI 110 Query: 256 D 256 Sbjct: 111 R 111 >gi|26246321|ref|NP_752360.1| putative electron transport protein ykgF [Escherichia coli CFT073] gi|110804377|ref|YP_687897.1| hypothetical protein SFV_0318 [Shigella flexneri 5 str. 8401] gi|218703591|ref|YP_002411110.1| putative oxidoreductase [Escherichia coli UMN026] gi|227884680|ref|ZP_04002485.1| electron transport protein ykgF [Escherichia coli 83972] gi|260853536|ref|YP_003227427.1| putative amino acid dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|293403428|ref|ZP_06647519.1| hypothetical protein ECGG_04141 [Escherichia coli FVEC1412] gi|298379039|ref|ZP_06988920.1| electron transporter ykgF [Escherichia coli FVEC1302] gi|300896286|ref|ZP_07114830.1| iron-sulfur cluster-binding protein [Escherichia coli MS 198-1] gi|300977325|ref|ZP_07173816.1| iron-sulfur cluster-binding protein [Escherichia coli MS 45-1] gi|301045924|ref|ZP_07193110.1| iron-sulfur cluster-binding protein [Escherichia coli MS 185-1] gi|306813210|ref|ZP_07447403.1| putative amino acid dehydrogenase [Escherichia coli NC101] gi|312964657|ref|ZP_07778908.1| iron-sulfur cluster binding protein [Escherichia coli 2362-75] gi|331651218|ref|ZP_08352243.1| iron-sulfur cluster-binding protein [Escherichia coli M718] gi|331661679|ref|ZP_08362602.1| iron-sulfur cluster-binding protein [Escherichia coli TA143] gi|26106719|gb|AAN78904.1|AE016756_87 Putative electron transport protein ykgF [Escherichia coli CFT073] gi|110613925|gb|ABF02592.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|218430688|emb|CAR11560.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli UMN026] gi|227838281|gb|EEJ48747.1| electron transport protein ykgF [Escherichia coli 83972] gi|257752185|dbj|BAI23687.1| predicted amino acid dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|291429281|gb|EFF02301.1| hypothetical protein ECGG_04141 [Escherichia coli FVEC1412] gi|298280152|gb|EFI21656.1| electron transporter ykgF [Escherichia coli FVEC1302] gi|300302100|gb|EFJ58485.1| iron-sulfur cluster-binding protein [Escherichia coli MS 185-1] gi|300359827|gb|EFJ75697.1| iron-sulfur cluster-binding protein [Escherichia coli MS 198-1] gi|300409850|gb|EFJ93388.1| iron-sulfur cluster-binding protein [Escherichia coli MS 45-1] gi|305853973|gb|EFM54412.1| putative amino acid dehydrogenase [Escherichia coli NC101] gi|307552226|gb|ADN45001.1| putative electron transport protein YkgF [Escherichia coli ABU 83972] gi|312290678|gb|EFR18556.1| iron-sulfur cluster binding protein [Escherichia coli 2362-75] gi|315295117|gb|EFU54452.1| iron-sulfur cluster-binding protein [Escherichia coli MS 153-1] gi|323158142|gb|EFZ44240.1| iron-sulfur cluster binding protein [Escherichia coli EPECa14] gi|323191427|gb|EFZ76689.1| iron-sulfur cluster binding protein [Escherichia coli RN587/1] gi|323965253|gb|EGB60711.1| iron-sulfur cluster-binding protein [Escherichia coli M863] gi|324010247|gb|EGB79466.1| iron-sulfur cluster-binding protein [Escherichia coli MS 57-2] gi|327254617|gb|EGE66233.1| iron-sulfur cluster binding protein [Escherichia coli STEC_7v] gi|331050959|gb|EGI23011.1| iron-sulfur cluster-binding protein [Escherichia coli M718] gi|331060101|gb|EGI32065.1| iron-sulfur cluster-binding protein [Escherichia coli TA143] gi|333008543|gb|EGK28011.1| iron-sulfur cluster binding protein [Shigella flexneri VA-6] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|150399131|ref|YP_001322898.1| CoB--CoM heterodisulfide reductase [Methanococcus vannielii SB] gi|150011834|gb|ABR54286.1| CoB--CoM heterodisulfide reductase [Methanococcus vannielii SB] Length = 184 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 14/92 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS +++ +DS + D +++ Sbjct: 31 LKACYQCGTCTGSCPSGR---RTAYRTRKVIRQALLGMDS-----------VLDSDDIWK 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + I I+ + + Sbjct: 77 CTTCYTCYERCPRDVKVTEIIKTIRNLAAQKG 108 >gi|170021310|ref|YP_001726264.1| iron-sulfur cluster binding protein [Escherichia coli ATCC 8739] gi|169756238|gb|ACA78937.1| iron-sulfur cluster binding protein [Escherichia coli ATCC 8739] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|113867406|ref|YP_725895.1| ferredoxin-like domain-containing protein [Ralstonia eutropha H16] gi|113526182|emb|CAJ92527.1| uncharacterized conserved protein containing a ferredoxin-like domain [Ralstonia eutropha H16] Length = 470 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVAVVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGERDGPEHMYFVLVDGGRTGLIGGDFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLANAIDLPQAA--------------TMCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + K++ ++R + Sbjct: 376 LSDLLRKLREKQMERGL 392 >gi|315644590|ref|ZP_07897722.1| hypothetical protein PVOR_03505 [Paenibacillus vortex V453] gi|315280097|gb|EFU43394.1| hypothetical protein PVOR_03505 [Paenibacillus vortex V453] Length = 589 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 191 LGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +GP + +Q W ++ D + + + ++ C T NC CP I Sbjct: 351 IGPTMDVQKSSWHQVEGVDPKDVQLIGGVMTEEEIWACTTCRNCEDQCPVANEHVDKIVD 410 Query: 250 IKMMLL 255 ++ L+ Sbjct: 411 LRRHLV 416 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L ++ Sbjct: 271 FYACVECGRCTNVCPASNTGKLLSPMHMIVKLRDHLTEKG 310 >gi|74310911|ref|YP_309330.1| hypothetical protein SSON_0317 [Shigella sonnei Ss046] gi|157159192|ref|YP_001461475.1| iron-sulfur cluster binding protein [Escherichia coli E24377A] gi|157159813|ref|YP_001457131.1| iron-sulfur cluster binding protein [Escherichia coli HS] gi|191165728|ref|ZP_03027567.1| iron-sulfur cluster binding protein [Escherichia coli B7A] gi|256020282|ref|ZP_05434147.1| hypothetical protein ShiD9_15295 [Shigella sp. D9] gi|300923801|ref|ZP_07139823.1| iron-sulfur cluster-binding protein [Escherichia coli MS 182-1] gi|301328122|ref|ZP_07221261.1| iron-sulfur cluster-binding protein [Escherichia coli MS 78-1] gi|307315296|ref|ZP_07594871.1| iron-sulfur cluster binding protein [Escherichia coli W] gi|309796678|ref|ZP_07691083.1| iron-sulfur cluster-binding protein [Escherichia coli MS 145-7] gi|312970397|ref|ZP_07784578.1| iron-sulfur cluster binding protein [Escherichia coli 1827-70] gi|332281445|ref|ZP_08393858.1| iron-sulfur cluster binding protein [Shigella sp. D9] gi|73854388|gb|AAZ87095.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|157065493|gb|ABV04748.1| iron-sulfur cluster binding protein [Escherichia coli HS] gi|157081222|gb|ABV20930.1| iron-sulfur cluster binding protein [Escherichia coli E24377A] gi|190904235|gb|EDV63945.1| iron-sulfur cluster binding protein [Escherichia coli B7A] gi|300419957|gb|EFK03268.1| iron-sulfur cluster-binding protein [Escherichia coli MS 182-1] gi|300845377|gb|EFK73137.1| iron-sulfur cluster-binding protein [Escherichia coli MS 78-1] gi|306905320|gb|EFN35861.1| iron-sulfur cluster binding protein [Escherichia coli W] gi|308119690|gb|EFO56952.1| iron-sulfur cluster-binding protein [Escherichia coli MS 145-7] gi|310337046|gb|EFQ02184.1| iron-sulfur cluster binding protein [Escherichia coli 1827-70] gi|315059591|gb|ADT73918.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli W] gi|323164102|gb|EFZ49909.1| iron-sulfur cluster binding protein [Shigella sonnei 53G] gi|323379845|gb|ADX52113.1| iron-sulfur cluster binding protein [Escherichia coli KO11] gi|332103797|gb|EGJ07143.1| iron-sulfur cluster binding protein [Shigella sp. D9] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|333022121|gb|EGK41364.1| iron-sulfur cluster binding protein [Shigella flexneri K-304] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERITPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|320184593|gb|EFW59391.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Shigella flexneri CDC 796-83] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|315604368|ref|ZP_07879434.1| sn-glycerol-3-phosphate dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314074|gb|EFU62125.1| sn-glycerol-3-phosphate dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] Length = 427 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 14/120 (11%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL-LQ 198 E + ++L D L CV C C T CP D + GP Q Sbjct: 4 EMSTLMGTSVHEGDVLSLTGDAALRASLDACVKCTICETQCPVMRVT-DLFGGPKYSGPQ 62 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R+ R D + C + CT CP+G+ + I + + Sbjct: 63 AERF-----------RKDGQMVDKSIDYCSSCGTCTLVCPQGVKVTELIHH-RRTAMKEA 110 >gi|331645487|ref|ZP_08346591.1| iron-sulfur cluster-binding protein [Escherichia coli M605] gi|330910112|gb|EGH38622.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Escherichia coli AA86] gi|331045649|gb|EGI17775.1| iron-sulfur cluster-binding protein [Escherichia coli M605] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPRFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|15669055|ref|NP_247859.1| heterodisulfide reductase subunit HdrC2 [Methanocaldococcus jannaschii DSM 2661] gi|41017092|sp|Q58274|HDRC2_METJA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit C 2 gi|1499692|gb|AAB98869.1| heterodisulfide reductase, subunit C2 (hdrC2) [Methanocaldococcus jannaschii DSM 2661] Length = 186 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ SCPS + R + R ++ D+ + D ++ C T Sbjct: 36 CYQCGTCTGSCPSGRRTAYR------TRKVLRKVLLGLDD--------VLDSDDIWYCTT 81 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+ + + I ++ + + Sbjct: 82 CYTCYERCPRDVKITEIIKTLRNIAAQKG 110 >gi|254448496|ref|ZP_05061956.1| eleCtron transport complex, rnfabcdge type, c subunit [gamma proteobacterium HTCC5015] gi|198261879|gb|EDY86164.1| eleCtron transport complex, rnfabcdge type, c subunit [gamma proteobacterium HTCC5015] Length = 792 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 21/103 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ +CP+ Y W SR+ + + Sbjct: 350 EIADPGHADPCIRCGACADACPADLLPQQLY-----------WYSKSRE------FERAQ 392 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDRK 258 D + L+ C C+ CP + + A +I+ ++++ Sbjct: 393 DEYNLFDCIECGCCSYVCPSHIPLVQYYRFAKTEIRNAEVEKR 435 >gi|330817665|ref|YP_004361370.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] gi|327370058|gb|AEA61414.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] Length = 473 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L S D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLERSLDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + ++ ++R + Sbjct: 361 -----------TLCGECDSVCPVGIPLSGLLRTLREKQVERGL 392 >gi|45358617|ref|NP_988174.1| heterodisulfide reductase subunit C2 [Methanococcus maripaludis S2] gi|45047483|emb|CAF30610.1| heterodisulfide reductase; subunit C2 [Methanococcus maripaludis S2] Length = 184 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 14/92 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS +++ IDS + D +++ Sbjct: 31 LKSCYQCGTCTGSCPSGR---RTAYRTRKVIRQALLGIDS-----------VLDSDDIWK 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + I I+ + + Sbjct: 77 CTTCYTCYERCPRDVKVTEIIKTIRNLAAQKG 108 >gi|325579257|ref|ZP_08149213.1| iron-sulfur cluster binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325159492|gb|EGC71626.1| iron-sulfur cluster binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 470 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 52/177 (29%), Gaps = 17/177 (9%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + G LA + + + L +V L + + E Sbjct: 229 TTLPKTHIAVMGMERLAPT----FQEVDVLITMLARSAVGAKLTGYNTWLTGPRLAGETD 284 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQA 199 + +S + + C+ C C +CP+Y G P + Sbjct: 285 GPEEFHLVIVDNGRSDILASEFQEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAV 344 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ DEF+ Y C C CP + A+ I K + +++ Sbjct: 345 ISPLLGGYDEFKEL----------PYACSLCNACNSVCPVRIPLAQLILKHREKMVE 391 >gi|227496425|ref|ZP_03926711.1| possible Fe-S dehydrogenase [Actinomyces urogenitalis DSM 15434] gi|226834044|gb|EEH66427.1| possible Fe-S dehydrogenase [Actinomyces urogenitalis DSM 15434] Length = 820 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + L+ C T C CP + I ++ + Sbjct: 464 VGEVIPADVLWSCTTCGACVDQCPVDIEHVDHIIDLRRQQV 504 >gi|323184634|gb|EFZ70006.1| iron-sulfur cluster binding protein [Escherichia coli 1357] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLIAMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|226315086|ref|YP_002774982.1| hypothetical protein BBR47_55010 [Brevibacillus brevis NBRC 100599] gi|226098036|dbj|BAH46478.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 691 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 36/129 (27%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLI------ 204 LY CV C C+ CP+ + L P L+ R W+ Sbjct: 273 DLYACVECGRCTNMCPASGT--GKMLSPMDLITKMRDHLTEKGASVTSRTPWMPSFAFSQ 330 Query: 205 ---------DSRDEFQGE---------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S E + ++ L+ C T NC CP Sbjct: 331 TTANQIAFQASEVAATAEGATAVYEKSLIGDVITEQELWACTTCRNCEDQCPVMNEHVDK 390 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 391 IIDMRRYLV 399 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 274 LYACVECGRCTNMCPASGTGKMLSPMDLITKMRDHLTEKG 313 >gi|159905900|ref|YP_001549562.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcus maripaludis C6] gi|159887393|gb|ABX02330.1| CoB--CoM heterodisulfide reductase, subunit C [Methanococcus maripaludis C6] Length = 192 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C C+ +CPS L L+++ IDS + L+ C Sbjct: 33 KCYQCGTCTGACPSGRITP---LRTRKLIRSALGGIDS-----------ILSSDDLWMCT 78 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + I ++ + +R Sbjct: 79 TCYECYEKCPREVKITDIIKIVRNIAAERG 108 >gi|322381599|ref|ZP_08055572.1| glycolate oxidase iron-sulfur subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154435|gb|EFX46738.1| glycolate oxidase iron-sulfur subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 446 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C +CP++ P + + + D E + + Sbjct: 15 EDQLTNCMRCGFCLPACPTFRETGVEAESPRGRIALMKAVADGIMEPDQLFQEQMN---- 70 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP ++ + + + + + Sbjct: 71 --HCLGCRACEPACPADVHYGSLLEQARNSIEQHGV 104 >gi|218698788|ref|YP_002406417.1| putative oxidoreductase [Escherichia coli IAI39] gi|218368774|emb|CAR16518.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli IAI39] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|215485419|ref|YP_002327850.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O127:H6 str. E2348/69] gi|215263491|emb|CAS07817.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O127:H6 str. E2348/69] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSVEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|229917683|ref|YP_002886329.1| iron-sulfur cluster binding protein [Exiguobacterium sp. AT1b] gi|259495063|sp|C4L0S1|LUTB_EXISA RecName: Full=Lactate utilization protein B gi|229469112|gb|ACQ70884.1| iron-sulfur cluster binding protein [Exiguobacterium sp. AT1b] Length = 468 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + A L+D E L Sbjct: 311 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAVLAP--LLDGY-----ENYKELPYASS 363 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT++CP + + + + + ++++ K Sbjct: 364 L-----CGACTEACPVKIPLHELLIEHRRVIVEEK 393 >gi|73541005|ref|YP_295525.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72118418|gb|AAZ60681.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 470 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVAVVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGERDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLANAVDLPQAA--------------TMCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + K++ ++R + Sbjct: 376 LSDLLRKLREKQMERGL 392 >gi|222032122|emb|CAP74861.1| Uncharacterized electron transport protein ykgF [Escherichia coli LF82] gi|312944899|gb|ADR25726.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli O83:H1 str. NRG 857C] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|284920116|emb|CBG33175.1| putative electron transport protein [Escherichia coli 042] Length = 475 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|116751376|ref|YP_848063.1| DNA binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700440|gb|ABK19628.1| DNA binding domain, excisionase family [Syntrophobacter fumaroxidans MPOB] Length = 314 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 13/99 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R C+ C C+++CP + L P ++ R ++ R + D Sbjct: 99 RADPQWADVCLTCGSCASACPISGVDG---LDPRKIV---RMVVLGRT-------KEVVD 145 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++C C ++CP + K +I+ + K+ Sbjct: 146 SNWTWKCTLCGKCEEACPMNVELVKLFRRIRGLREREKV 184 >gi|261886403|ref|ZP_06010442.1| iron-sulfur cluster binding protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 474 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 17/106 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSR 207 + ++ C+ C C CP Y Y GP + + + Sbjct: 291 NNRTNMLAHEEYSEALRCIRCGACMNFCPVYDKIGGHSYRAVYPGPIGEVISPQIFG--- 347 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +DN D L C C++ CP + A I K++ Sbjct: 348 -------MDNYGDIVSL--CSLCGRCSEVCPVEIPLADLIRKLRRD 384 >gi|261402406|ref|YP_003246630.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus vulcanius M7] gi|261369399|gb|ACX72148.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus vulcanius M7] Length = 186 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ SCPS + R + R ++ D+ + D ++ C T Sbjct: 36 CYQCGTCTGSCPSGRRTAYR------TRKVLRKVLLGLDD--------VLDTDDIWYCTT 81 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+ + + I ++ + + Sbjct: 82 CYTCYERCPRDVKITEIIKTLRNVAAKKG 110 >gi|154687832|ref|YP_001422993.1| YwjF [Bacillus amyloliquefaciens FZB42] gi|154353683|gb|ABS75762.1| YwjF [Bacillus amyloliquefaciens FZB42] Length = 702 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 41/134 (30%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLID 205 R ++ LY CV C C+ CP+ + L P L+ R W+ Sbjct: 268 RSQLVDLYACVECGRCTNMCPASGT--GKMLSPMDLILKLRDHLTEKGAAVTSKSPWVPA 325 Query: 206 S-------------------RDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGL 241 R+ + ++ ++ C T NC CP Sbjct: 326 PVFQHTKANQLAAASSGGGSREAAAAIDYNPSLIGDVITAEEIWACTTCRNCEDQCPVMN 385 Query: 242 NPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 EHVDKIIDLRRYLV 399 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R L D LY C CT CP K L+P I K++ L ++ Sbjct: 267 RRSQLVD---LYACVECGRCTNMCPASGTGKMLSPMDLILKLRDHLTEKG 313 >gi|300709463|ref|YP_003735277.1| hypothetical protein HacjB3_00460 [Halalkalicoccus jeotgali B3] gi|299123146|gb|ADJ13485.1| hypothetical protein HacjB3_00460 [Halalkalicoccus jeotgali B3] Length = 713 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 10/142 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPS 182 ++ ++ ++ L + +S +D + L + C C CS+ CP+ Sbjct: 254 MLSSFANVVTRDEQAGRVLPNIPADLDATNAESIDDFTWKELLDQDACTKCGRCSSVCPA 313 Query: 183 YWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLD---NLEDPFRLYRCHTIMNCTQS 236 S R L P ++ ++YR +D+ E D ++ D + C M C + Sbjct: 314 KA--SGRPLDPRDVILDLKSYREEVDAGAEDTPIIADGGSSVIDAETMESCMACMACMDA 371 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP + + ++ L D+ Sbjct: 372 CPVEIEHLNSFTRMNRQLTDQG 393 >gi|256372135|ref|YP_003109959.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008719|gb|ACU54286.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 419 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + CV C C ++CP+Y P + +R+ Sbjct: 10 ARIAELAATCVHCGFCLSACPTYAVTRAEADSPRGRIWLLAEEATRSGPVVADRVRL--- 66 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + RC C +CP G+ I + L++ Sbjct: 67 --HIDRCIGCEACVPACPSGVRY-DEIIHLARGLVE 99 >gi|193213857|ref|YP_001995056.1| hypothetical protein Ctha_0138 [Chloroherpeton thalassium ATCC 35110] gi|193087334|gb|ACF12609.1| conserved hypothetical protein [Chloroherpeton thalassium ATCC 35110] Length = 245 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 12/119 (10%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + + D + LY C C C+ SCPS + + Sbjct: 8 KYADVAPAEKLRLFNEVKADFRWHHVLYGCYECGICTASCPSARFYD--FSPRVFAQIMA 65 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R IDS + L D + C +CT+ CP+ +P I ++ + ++ + Sbjct: 66 REDIDS-------FYELLNDVM--WSCSQCFSCTR-CPRHNSPGGIITIMREVAVNNGL 114 >gi|167753171|ref|ZP_02425298.1| hypothetical protein ALIPUT_01442 [Alistipes putredinis DSM 17216] gi|167659485|gb|EDS03615.1| hypothetical protein ALIPUT_01442 [Alistipes putredinis DSM 17216] Length = 462 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 14/99 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C+ C C +CP Y + Y P L L ER Sbjct: 296 HRNMLKCLRCGACMNTCPVYRRSGGYSYSYFIPGPLGINLGML------RSPERYG---- 345 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C +C+ CP ++ + I + + ++ + Sbjct: 346 -GNVSGCSLCYSCSDVCPAKIDLGEQIYAWRQEMGEKNL 383 >gi|118474315|ref|YP_892058.1| iron-sulfur cluster binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118413541|gb|ABK81961.1| iron-sulfur cluster binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 474 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 17/106 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSR 207 + ++ C+ C C CP Y Y GP + + + Sbjct: 291 NNRTNMLAHEEYSEALRCIRCGACMNFCPVYDKIGGHSYRAVYPGPIGEVISPQIFG--- 347 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +DN D L C C++ CP + A I K++ Sbjct: 348 -------MDNYGDIVSL--CSLCGRCSEVCPVEIPLADLIRKLRRD 384 >gi|119871762|ref|YP_929769.1| ferredoxin [Pyrobaculum islandicum DSM 4184] gi|119673170|gb|ABL87426.1| ferredoxin [Pyrobaculum islandicum DSM 4184] Length = 100 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 + + R G +Y V++ + +LD LL I+ K+D TL++R +CR G+CG+ Sbjct: 3 VKVHVKRGR---NGAQYYQSYIVEI-SENITILDLLLLIREKLDGTLSMRYACRMGVCGA 58 Query: 88 CGMNIDGTNTLACV-KDMKDIKGAIAVYPLPHMSVIKDLVVD 128 C M I+G LAC K I + PL VIKDLV + Sbjct: 59 CAMVINGVPRLACTVKISDLKTDEIFIEPLKGKKVIKDLVTE 100 >gi|297155689|gb|ADI05401.1| iron-sulfur protein [Streptomyces bingchenggensis BCW-1] Length = 500 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 14/173 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKVVPTWQDLEVFLQLLPRSSTAERMNPYTSTWTGTTDGDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + D L C+ C+ C CP Y G A L Sbjct: 292 RAFHLVLLDNGRTDTLADTVGRQALRCIRCSACLNVCPVYERAGGHAYGSAYPGPIGAIL 351 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q E +L L C + CP ++ + + ++ +++ Sbjct: 352 TPQLRGTQSELDASLPYASSL-----CGACYEVCPVAIDIPEILVHLRERVVE 399 >gi|295697064|ref|YP_003590302.1| hypothetical protein Btus_2498 [Bacillus tusciae DSM 2912] gi|295412666|gb|ADG07158.1| conserved hypothetical protein [Bacillus tusciae DSM 2912] Length = 230 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + + + D + D LY C C C +CPS + Sbjct: 7 SYTEIPLEEKERLFAEVKADPRFHDYLYGCYECGICVAACPSARFYDFSP---------- 56 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R + + E + ++ C +CT+ CP+ NP I ++ + + + Sbjct: 57 RKIAQTLAREDVETFYVQLNED-VWNCSQCFSCTR-CPRKNNPGGLITIMREVAVKNGL 113 >gi|325576626|ref|ZP_08147344.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parainfluenzae ATCC 33392] gi|325161189|gb|EGC73304.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus parainfluenzae ATCC 33392] Length = 425 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 12/103 (11%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C+ C C+ CP N + Y GP S + + RL Sbjct: 17 PQHHHAFDESFESCIKCTACTAVCPVSRQNPN-YPGPK----------QSGPDGERLRLK 65 Query: 217 NLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E L C C +CP + I + + L ++ Sbjct: 66 SAELYDEALKYCTNCKRCEIACPSDVKIGDIIVRARNKYLAQQ 108 >gi|150402328|ref|YP_001329622.1| CoB--CoM heterodisulfide reductase [Methanococcus maripaludis C7] gi|150033358|gb|ABR65471.1| CoB--CoM heterodisulfide reductase [Methanococcus maripaludis C7] Length = 192 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C C+ +CPS L L+++ IDS + L+ C Sbjct: 33 KCYQCGTCTGACPSGRITP---LRTRKLIRSALAGIDS-----------ILSGDDLWMCT 78 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + I I+ + ++ Sbjct: 79 TCYECYEKCPREVKITDIIKIIRNIAAEKG 108 >gi|299138258|ref|ZP_07031437.1| iron-sulfur cluster binding protein [Acidobacterium sp. MP5ACTX8] gi|298599504|gb|EFI55663.1| iron-sulfur cluster binding protein [Acidobacterium sp. MP5ACTX8] Length = 503 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCH 228 C+ C C +CP Y G L +L +LE L + Sbjct: 319 CIRCGACLNACPVYRETGGHAYGSIYSGPIGAIL--------SPQLQSLEHSRSLPFAST 370 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP +N + + ++ ++ Sbjct: 371 LCGACYEVCPVKINIPEVLIHLRGRVVRE 399 >gi|301155406|emb|CBW14872.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus parainfluenzae T3T1] Length = 425 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 12/103 (11%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C+ C C+ CP N + Y GP S + + RL Sbjct: 17 PQHHHAFDESFESCIKCTACTAVCPVSRQNPN-YPGPK----------QSGPDGERLRLK 65 Query: 217 NLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E L C C +CP + I + + L ++ Sbjct: 66 SAELYDEALKYCTNCKRCEIACPSDVKIGDIIVRARNKYLAQQ 108 >gi|322514336|ref|ZP_08067388.1| iron-sulfur cluster binding protein [Actinobacillus ureae ATCC 25976] gi|322119771|gb|EFX91807.1| iron-sulfur cluster binding protein [Actinobacillus ureae ATCC 25976] Length = 469 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 13/94 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP+Y G P + L+ DEF+ Y Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAVISPLLGGYDEFKEL----------PY 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP + A+ I K + + D + Sbjct: 362 ACSLCTACNSVCPVKIPLAQLILKHREKIADAGL 395 >gi|83313231|ref|YP_423495.1| FAD/FMN-containing dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82948072|dbj|BAE52936.1| FAD/FMN-containing dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 936 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 10/91 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPFRL 224 C+ C C CPS+ L P + ++R + SR E L L D + Sbjct: 542 DTCIECGFCERMCPSHGLT----LSPRQRITSWREI--SRRTAANENSDELRRLYDYQGI 595 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK-MML 254 C C +CP G+ + ++ L Sbjct: 596 DTCAACGLCATACPVGIETGRLTKSLRGRRL 626 >gi|194289427|ref|YP_002005334.1| oxido reductase, 4fe-4S ferredoxin iron-sulfur binding [Cupriavidus taiwanensis LMG 19424] gi|193223262|emb|CAQ69267.1| putative oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding [Cupriavidus taiwanensis LMG 19424] Length = 470 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVAVVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGERDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLANAVDLPQAA--------------TMCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + K++ ++R + Sbjct: 376 LSDLLRKLREKQMERGL 392 >gi|311070237|ref|YP_003975160.1| putative iron-sulfur-binding reductase [Bacillus atrophaeus 1942] gi|310870754|gb|ADP34229.1| putative iron-sulfur-binding reductase [Bacillus atrophaeus 1942] Length = 741 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 41/129 (31%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----------- 214 LY CV C C+ CP+ + L P L+ R + + R Sbjct: 305 DLYACVECGRCTNMCPASGT--GKMLSPMDLILRLRDHLTEKGAAVTSRSPWVPALAFQH 362 Query: 215 ----------------------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + ++ ++ C T NC CP Sbjct: 363 TKGNQLAAASAASGSKEAAAAAEYSPDLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDK 422 Query: 247 IAKIKMMLL 255 I ++ L+ Sbjct: 423 IIDLRRYLV 431 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I +++ L ++ Sbjct: 306 LYACVECGRCTNMCPASGTGKMLSPMDLILRLRDHLTEKG 345 >gi|268324160|emb|CBH37748.1| heterodisulfide reductase, subunit C [uncultured archaeon] Length = 185 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 13/96 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 ++ L ECV C C+ CPS + L L+Q L+D R+E + + Sbjct: 20 HLETLRECVQCGKCTGGCPSGR---NTALRTRKLMQMA--LVDMREE--------IFNAP 66 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CPKG+ I I+ + Sbjct: 67 ELWFCSTCYTCYERCPKGVKVTDIIRTIRNLAAKEG 102 >gi|83590296|ref|YP_430305.1| hypothetical protein Moth_1452 [Moorella thermoacetica ATCC 39073] gi|83573210|gb|ABC19762.1| Protein of unknown function DUF224, cysteine-rich region [Moorella thermoacetica ATCC 39073] Length = 412 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 12/111 (10%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P + L + L C+ C CS CP+ + + P +++ W ++ Sbjct: 13 PPLYQNLHEKITGALGEATLRSCLTCGVCSGGCPTG--DIGAPVDPRKIVRLLLWGME-- 68 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + ++ C CT CP G+N + ++ L + Sbjct: 69 --------DKVLASDMIWLCTMCGRCTVYCPVGVNMGDLVRALRSHLAEEG 111 >gi|332797367|ref|YP_004458867.1| heterodisulfide reductase subunit C [Acidianus hospitalis W1] gi|332695102|gb|AEE94569.1| heterodisulfide reductase subunit C (HdrC-2) [Acidianus hospitalis W1] Length = 230 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C + D GP + R + + L L+D L+R Sbjct: 60 ISACWQCGTCTSGCTMREY--DPNFGPRKFIDLAR-------KGDKQALAELQD--SLWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I L + Sbjct: 109 CVSCQKCTHRCPKGVMVEEVVHAIHNYALKHGL 141 >gi|257791603|ref|YP_003182209.1| hypothetical protein Elen_1856 [Eggerthella lenta DSM 2243] gi|317487981|ref|ZP_07946564.1| cysteine-rich domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|257475500|gb|ACV55820.1| protein of unknown function DUF224 cysteine-rich region domain protein [Eggerthella lenta DSM 2243] gi|316912930|gb|EFV34456.1| cysteine-rich domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 686 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 26/119 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------------ 208 + + CV C C T CP++ S + L P L+QA + R Sbjct: 276 WKDLLDAEACVRCGRCETVCPAHG--SGKPLSPKDLMQALDAHLGERGPLVRAERRAEAA 333 Query: 209 ----EFQGERLDNLED--------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E E+ L+ P L+ C T C ++CP L + ++ + Sbjct: 334 GEAFEPTEEQRAVLDKALVGDVVAPEALWSCTTCGACMEACPALLEHVPKVVGMRTYQV 392 Score = 35.1 bits (79), Expect = 10.0, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 29/92 (31%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + + + A D + L+ C C C +CP+ + + +G Sbjct: 328 RRAEAAGEAFEPTEEQRAVLDKALVGDVVAPEALWSCTTCGACMEACPALLEHVPKVVGM 387 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + S + L+ +P+ L Sbjct: 388 RTYQVSMESAFPSEAKAAFRNLETNGNPWGLG 419 >gi|150399226|ref|YP_001322993.1| CoB--CoM heterodisulfide reductase [Methanococcus vannielii SB] gi|150011929|gb|ABR54381.1| CoB--CoM heterodisulfide reductase [Methanococcus vannielii SB] Length = 193 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 14/98 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C C C+ +CPS + L L+++ +D NL Sbjct: 26 ANNASSFQKCYQCGTCTGACPSGRITA---LRTRKLIRSALSGMD-----------NLLK 71 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+ + I I+ + + Sbjct: 72 SDDLWMCTTCYECYEKCPREVKITDIIKTIRNIAAEEG 109 >gi|260575860|ref|ZP_05843856.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259022013|gb|EEW25313.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 414 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 9/109 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-------QAYRWLIDSRDEFQG 212 + + L C+ C C+ +C Y + D PA L +A +W + Sbjct: 17 EVHMVSYLEACLHCGQCADACLFYRTSGDPRHTPAYKLFPIAKALKAQKWPLKWLGLAPK 76 Query: 213 ERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L + L C CT+ CP ++ A + + + + + Sbjct: 77 LTEKDLTEWEELIFDTCTMCGRCTEVCPMSIDIASIVGQARKAFVAAGL 125 >gi|254251963|ref|ZP_04945281.1| hypothetical protein BDAG_01169 [Burkholderia dolosa AUO158] gi|124894572|gb|EAY68452.1| hypothetical protein BDAG_01169 [Burkholderia dolosa AUO158] Length = 470 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ ++ + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSQLLRTLREKQVERHL 392 >gi|325958457|ref|YP_004289923.1| cob/CoM heterodisulfide reductase subunit C [Methanobacterium sp. AL-21] gi|325329889|gb|ADZ08951.1| CoB/CoM heterodisulfide reductase, subunit C [Methanobacterium sp. AL-21] Length = 331 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 13/91 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ +CPS G + + S + E + ++ C Sbjct: 179 ALCFQCGTCTGACPS---------GRRTPYKIRNVVRKSVMGLKEEVIA----DDTIWMC 225 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+G+ + ++ Sbjct: 226 TTCYECQERCPRGIKIVDVVKTVRNFAAQAG 256 >gi|229528120|ref|ZP_04417511.1| hypothetical protein VCG_001200 [Vibrio cholerae 12129(1)] gi|229334482|gb|EEN99967.1| hypothetical protein VCG_001200 [Vibrio cholerae 12129(1)] Length = 968 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+++ + L Sbjct: 553 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEHVFEYQGL 608 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 609 DTCAATGLCAERCPVGINTGDLVKKLR 635 >gi|257388560|ref|YP_003178333.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Halomicrobium mukohataei DSM 12286] gi|257170867|gb|ACV48626.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Halomicrobium mukohataei DSM 12286] Length = 461 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 7/117 (5%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 T ++ E G C C+ C T+CP D + GP Sbjct: 18 PNTGEEFEPVQVFPDEETMDLRPGADSCTKCSTCDTNCPVAEV-DDEFPGPKFQGPEQWR 76 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L + D D + C M C +CP G+ ++ + + +D ++ Sbjct: 77 LKQTDDG------DEFAIDDSIMDCSNCMRCDDACPSGVPLSQMHNEARGEYVDEQM 127 >gi|153827808|ref|ZP_01980475.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 623-39] gi|148876653|gb|EDL74788.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 623-39] Length = 959 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+++ + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEHVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|153801826|ref|ZP_01956412.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MZO-3] gi|153824715|ref|ZP_01977382.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] gi|124122660|gb|EAY41403.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MZO-3] gi|149741671|gb|EDM55700.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] Length = 959 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+++ + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEHVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|251787853|ref|YP_003002574.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Dickeya zeae Ech1591] gi|247536474|gb|ACT05095.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Dickeya zeae Ech1591] Length = 400 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 10/85 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+T+CP N Y GP D + R D L Sbjct: 9 FENCIKCTVCTTACPVARVNP-LYPGPKQA---------GPDGERLRRKDPSLFDEALKY 58 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP + I + K Sbjct: 59 CTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|291287759|ref|YP_003504575.1| FAD linked oxidase domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884919|gb|ADD68619.1| FAD linked oxidase domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 944 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 3/128 (2%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQ-SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 R + + + + E+ +K G +C + CP Y D Sbjct: 512 QMMKYLRFGKDYRSSDMKDKRLVWAEGFTEEAEKCHGCSKCTTVTPATRMCPVYKVTRDE 571 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 P R L+ + + +L+ + C T +C CP +N K + Sbjct: 572 LSAPKAKANILRALMSGAIDNKAIYEKSLQ--EVISHCVTCGSCHVECPSNVNIPKLSME 629 Query: 250 IKMMLLDR 257 K + + Sbjct: 630 AKAQYVKK 637 >gi|295676946|ref|YP_003605470.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1002] gi|295436789|gb|ADG15959.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1002] Length = 471 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ + LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDKALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ +R + Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQTERHL 392 >gi|209522108|ref|ZP_03270757.1| protein of unknown function DUF162 [Burkholderia sp. H160] gi|209497462|gb|EDZ97668.1| protein of unknown function DUF162 [Burkholderia sp. H160] Length = 471 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ + LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDKALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + K++ +R + Sbjct: 358 QAA------TLCGECNSVCPVGIPLSDLLRKLREKQTERHL 392 >gi|322368041|ref|ZP_08042610.1| iron-sulfur protein (4Fe-4S) [Haladaptatus paucihalophilus DX253] gi|320552057|gb|EFW93702.1| iron-sulfur protein (4Fe-4S) [Haladaptatus paucihalophilus DX253] Length = 708 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLD- 216 +++ C C CS+ CP+ S R L P ++ + YR +D + + D Sbjct: 305 WKQLLDQDACTKCGRCSSVCPAKA--SGRPLDPRDVILDLKQYRENLDMGGDEKPIIADG 362 Query: 217 --NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ D + C M C +CP + + ++ L + Sbjct: 363 GSSVIDSSTMESCMACMACMDACPVEIEHLSSFTEMNRRLTE 404 >gi|307256498|ref|ZP_07538279.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864908|gb|EFM96810.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 469 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|307254232|ref|ZP_07536073.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258695|ref|ZP_07540427.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306862779|gb|EFM94732.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867046|gb|EFM98902.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 469 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|307249675|ref|ZP_07531657.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858284|gb|EFM90358.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 469 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|303251128|ref|ZP_07337313.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252001|ref|ZP_07533901.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650018|gb|EFL80189.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860470|gb|EFM92483.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 469 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|32035743|ref|ZP_00135615.1| COG1139: Uncharacterized conserved protein containing a ferredoxin-like domain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207929|ref|YP_001053154.1| putative electron transport protein [Actinobacillus pleuropneumoniae L20] gi|165975904|ref|YP_001651497.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149791|ref|YP_001968316.1| electron transporter [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245283|ref|ZP_07527371.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307260926|ref|ZP_07542610.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263110|ref|ZP_07544731.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096721|gb|ABN73549.1| putative electron transport protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876005|gb|ABY69053.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914922|gb|ACE61174.1| putative electron transport protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853624|gb|EFM85841.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306869365|gb|EFN01158.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871472|gb|EFN03195.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 469 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|319650931|ref|ZP_08005066.1| hypothetical protein HMPREF1013_01673 [Bacillus sp. 2_A_57_CT2] gi|317397287|gb|EFV77990.1| hypothetical protein HMPREF1013_01673 [Bacillus sp. 2_A_57_CT2] Length = 703 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 41/134 (30%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE----------- 209 + ++ Y CV C C+ CP+ + + L P L+ R + + Sbjct: 268 QHQMIDFYACVECGRCTNMCPA--TGTGKMLSPMDLILKLRDHLTNHGAVVTSKQPWVPT 325 Query: 210 ----------------------------FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + + + ++ C T NC CP Sbjct: 326 FAFSNTKGNQLALAAAGQGAEEAAAGLAYSPSLIGEVITEEEIWACTTCRNCEDQCPVMN 385 Query: 242 NPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 EHVDKIIDLRRYLV 399 >gi|229505880|ref|ZP_04395389.1| hypothetical protein VCF_001090 [Vibrio cholerae BX 330286] gi|229510266|ref|ZP_04399746.1| hypothetical protein VCE_001672 [Vibrio cholerae B33] gi|229517603|ref|ZP_04407048.1| hypothetical protein VCC_001626 [Vibrio cholerae RC9] gi|229605413|ref|YP_002876117.1| hypothetical protein VCD_000353 [Vibrio cholerae MJ-1236] gi|229345639|gb|EEO10612.1| hypothetical protein VCC_001626 [Vibrio cholerae RC9] gi|229352711|gb|EEO17651.1| hypothetical protein VCE_001672 [Vibrio cholerae B33] gi|229356231|gb|EEO21149.1| hypothetical protein VCF_001090 [Vibrio cholerae BX 330286] gi|229371899|gb|ACQ62321.1| hypothetical protein VCD_000353 [Vibrio cholerae MJ-1236] Length = 968 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ + + +R + P + K + + + C+ C C CPS Sbjct: 511 LMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA-DNLVDRCIECGFCEPVCPSRT 569 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L P + YR L R L+ + + L C C + CP G+ Sbjct: 570 LT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 625 Query: 242 NPAKAIAKIK 251 N + K++ Sbjct: 626 NTGDLVKKLR 635 >gi|153818163|ref|ZP_01970830.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae NCTC 8457] gi|126511269|gb|EAZ73863.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae NCTC 8457] Length = 736 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ + + +R + P + K + + + C+ C C CPS Sbjct: 502 LMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA-DNLVDRCIECGFCEPVCPSRT 560 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L P + YR L R L+ + + L C C + CP G+ Sbjct: 561 LT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 616 Query: 242 NPAKAIAKIK 251 N + K++ Sbjct: 617 NTGDLVKKLR 626 >gi|147672346|ref|YP_001215094.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae O395] gi|262169241|ref|ZP_06036934.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholerae RC27] gi|146314729|gb|ABQ19269.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae O395] gi|227015630|gb|ACP11839.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae O395] gi|262022522|gb|EEY41230.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholerae RC27] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ + + +R + P + K + + + C+ C C CPS Sbjct: 502 LMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA-DNLVDRCIECGFCEPVCPSRT 560 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L P + YR L R L+ + + L C C + CP G+ Sbjct: 561 LT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 616 Query: 242 NPAKAIAKIK 251 N + K++ Sbjct: 617 NTGDLVKKLR 626 >gi|121726411|ref|ZP_01679685.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae V52] gi|121631159|gb|EAX63534.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae V52] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ + + +R + P + K + + + C+ C C CPS Sbjct: 502 LMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA-DNLVDRCIECGFCEPVCPSRT 560 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L P + YR L R L+ + + L C C + CP G+ Sbjct: 561 LT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 616 Query: 242 NPAKAIAKIK 251 N + K++ Sbjct: 617 NTGDLVKKLR 626 >gi|15601738|ref|NP_233369.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|153821097|ref|ZP_01973764.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|227812550|ref|YP_002812560.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae M66-2] gi|254850148|ref|ZP_05239498.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MO10] gi|255746279|ref|ZP_05420226.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholera CIRS 101] gi|262158161|ref|ZP_06029279.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholerae INDRE 91/1] gi|298499756|ref|ZP_07009562.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MAK 757] gi|9658426|gb|AAF96881.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126521471|gb|EAZ78694.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|227011692|gb|ACP07903.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae M66-2] gi|254845853|gb|EET24267.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MO10] gi|255736033|gb|EET91431.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholera CIRS 101] gi|262030039|gb|EEY48685.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio cholerae INDRE 91/1] gi|297541737|gb|EFH77788.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae MAK 757] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ + + +R + P + K + + + C+ C C CPS Sbjct: 502 LMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA-DNLVDRCIECGFCEPVCPSRT 560 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L P + YR L R L+ + + L C C + CP G+ Sbjct: 561 LT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 616 Query: 242 NPAKAIAKIK 251 N + K++ Sbjct: 617 NTGDLVKKLR 626 >gi|315638317|ref|ZP_07893498.1| iron-sulfur cluster binding protein [Campylobacter upsaliensis JV21] gi|315481664|gb|EFU72287.1| iron-sulfur cluster binding protein [Campylobacter upsaliensis JV21] Length = 473 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 30/105 (28%), Gaps = 19/105 (18%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQA-YRWLIDS 206 + C+ C C CP Y Y GP + + + +D Sbjct: 291 HHRSDMLAHKDYYEALRCIRCGACMNFCPVYDKIGGHSYQTIYPGPIGEVISPNLFGMD- 349 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L C C++ CP + A I K++ Sbjct: 350 ------------QTGDILNFCSLCGRCSEVCPVKIPLADLIRKLR 382 >gi|300117860|ref|ZP_07055627.1| ferredoxin, 4Fe-4S [Bacillus cereus SJ1] gi|298724724|gb|EFI65399.1| ferredoxin, 4Fe-4S [Bacillus cereus SJ1] Length = 703 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMATGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|302556446|ref|ZP_07308788.1| iron-sulfur cluster-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302474064|gb|EFL37157.1| iron-sulfur cluster-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 481 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 44/175 (25%), Gaps = 14/175 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + V + V L+ S + W T + Sbjct: 233 NGRMCLTLPETLISVAGIEKVVPTWQDLEVFLQLLPRSSTGERMNPYTSTWTGTTADDGP 292 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + D L C+ C+ C CP Y G L Sbjct: 293 RAFHLVLVDAGRTDALADPVGRQALNCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAVL 352 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L L C + CP +N + + ++ + + Sbjct: 353 SPQLRGTTSDVDRALPYASSL-----CGACYEVCPVKINIPEVLLHLRARIAEEG 402 >gi|229020566|ref|ZP_04177308.1| hypothetical protein bcere0030_50450 [Bacillus cereus AH1273] gi|229026784|ref|ZP_04183116.1| hypothetical protein bcere0029_50510 [Bacillus cereus AH1272] gi|228734507|gb|EEL85169.1| hypothetical protein bcere0029_50510 [Bacillus cereus AH1272] gi|228740730|gb|EEL90986.1| hypothetical protein bcere0030_50450 [Bacillus cereus AH1273] Length = 703 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|229064995|ref|ZP_04200293.1| hypothetical protein bcere0026_50520 [Bacillus cereus AH603] gi|228716296|gb|EEL68008.1| hypothetical protein bcere0026_50520 [Bacillus cereus AH603] Length = 673 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229136164|ref|ZP_04264917.1| hypothetical protein bcere0014_50370 [Bacillus cereus BDRD-ST196] gi|228647323|gb|EEL03405.1| hypothetical protein bcere0014_50370 [Bacillus cereus BDRD-ST196] Length = 673 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229170054|ref|ZP_04297745.1| hypothetical protein bcere0007_49900 [Bacillus cereus AH621] gi|228613401|gb|EEK70535.1| hypothetical protein bcere0007_49900 [Bacillus cereus AH621] Length = 703 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|255039477|ref|YP_003090098.1| hypothetical protein Dfer_5745 [Dyadobacter fermentans DSM 18053] gi|254952233|gb|ACT96933.1| protein of unknown function DUF162 [Dyadobacter fermentans DSM 18053] Length = 458 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ C C +CP Y + A+ L + D + L Sbjct: 297 RKDFRNSLKCIRCGACMNTCPVYRRSGGHSYHNAVAGPIGSILAPNLDMTKNADLP---- 352 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +C+ CP ++ + K + +L Sbjct: 353 ----FASTLCGSCSNVCPVKIDIHDQLYKWRQVLAKEG 386 >gi|121534333|ref|ZP_01666157.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] gi|121307103|gb|EAX48021.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] Length = 407 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C T CP + R L+ E + L+ + C Sbjct: 18 SQCDRCGTCLTVCPLFGVKDIEASSARGKNNIARALVQGGFEPTPDVLEAMN------FC 71 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP + +A+ I+ D+ Sbjct: 72 LLCRTCVENCPSKVKTDEAMMAIRQYFADK 101 >gi|163943033|ref|YP_001647917.1| hypothetical protein BcerKBAB4_5143 [Bacillus weihenstephanensis KBAB4] gi|229014514|ref|ZP_04171632.1| hypothetical protein bmyco0001_49170 [Bacillus mycoides DSM 2048] gi|163865230|gb|ABY46289.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus weihenstephanensis KBAB4] gi|228746864|gb|EEL96749.1| hypothetical protein bmyco0001_49170 [Bacillus mycoides DSM 2048] Length = 703 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYSCVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|320159017|ref|YP_004191395.1| putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Vibrio vulnificus MO6-24/O] gi|319934329|gb|ADV89192.1| predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Vibrio vulnificus MO6-24/O] Length = 945 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 13/127 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + F Q + +P E L+ + C+ C C CPS Sbjct: 508 TIFDPQGLLNPGVIINDNPHSHIENLKPMPAA--DPLVDRCIECGFCEPVCPSRTLT--- 562 Query: 190 YLGPAILLQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 L P + YR L R E GE+ L+ + + + C C+ CP G+N Sbjct: 563 -LSPRQRIVLYRELQ--RRERAGEKTQASELEKVFEYQGIDTCAATGLCSDRCPVGINTG 619 Query: 245 KAIAKIK 251 + K++ Sbjct: 620 DLVKKLR 626 >gi|311696982|gb|ADP99855.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [marine bacterium HP15] Length = 938 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLY 225 +C+ C C CPS L P + +R + R E E L+ L Sbjct: 538 DKCIECGFCEPVCPSEGLT----LSPRQRIVIWRDIQARRRVGEDTAE-LEKAYQYHGLD 592 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + K++ Sbjct: 593 TCAATGLCAQRCPVGINTGDLVRKLRSE 620 >gi|261404132|ref|YP_003240373.1| hypothetical protein GYMC10_0259 [Paenibacillus sp. Y412MC10] gi|261280595|gb|ACX62566.1| protein of unknown function DUF224 cysteine-rich region domain protein [Paenibacillus sp. Y412MC10] Length = 726 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 191 LGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +GP + +Q W ++ D + + + ++ C T NC CP I Sbjct: 351 IGPTMDVQKRSWHQVEGVDPKDIQLIGGVMTEEEIWACTTCRNCEDQCPVANEHVDKIVD 410 Query: 250 IKMMLL 255 ++ L+ Sbjct: 411 LRRHLV 416 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L ++ Sbjct: 271 FYACVECGRCTNVCPASNTGKLLSPMHMIVKLRDHLTEKG 310 >gi|171320028|ref|ZP_02909099.1| protein of unknown function DUF162 [Burkholderia ambifaria MEX-5] gi|171094721|gb|EDT39764.1| protein of unknown function DUF162 [Burkholderia ambifaria MEX-5] Length = 470 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|172061085|ref|YP_001808737.1| hypothetical protein BamMC406_2040 [Burkholderia ambifaria MC40-6] gi|171993602|gb|ACB64521.1| protein of unknown function DUF162 [Burkholderia ambifaria MC40-6] Length = 470 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|262403060|ref|ZP_06079620.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio sp. RC586] gi|262350559|gb|EEY99692.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio sp. RC586] Length = 949 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|262164513|ref|ZP_06032251.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio mimicus VM223] gi|262026893|gb|EEY45560.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio mimicus VM223] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|262173312|ref|ZP_06040989.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio mimicus MB-451] gi|261890670|gb|EEY36657.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio mimicus MB-451] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|258625179|ref|ZP_05720095.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio mimicus VM603] gi|258582554|gb|EEW07387.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio mimicus VM603] Length = 709 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 294 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEQVFEYQGL 349 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 350 DTCAATGLCAERCPVGINTGDLVKKLR 376 >gi|229522506|ref|ZP_04411922.1| hypothetical protein VIF_003066 [Vibrio cholerae TM 11079-80] gi|229340491|gb|EEO05497.1| hypothetical protein VIF_003066 [Vibrio cholerae TM 11079-80] Length = 968 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 553 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGL 608 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 609 DTCAATGLCAERCPVGINTGDLVKKLR 635 >gi|153212189|ref|ZP_01947984.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 1587] gi|124116741|gb|EAY35561.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 1587] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGESVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|29349864|ref|NP_813367.1| putative electron transport protein [Bacteroides thetaiotaomicron VPI-5482] gi|253569767|ref|ZP_04847176.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341775|gb|AAO79561.1| putative electron transport protein [Bacteroides thetaiotaomicron VPI-5482] gi|251840148|gb|EES68230.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 461 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + +L + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSTILSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + D + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMAHDP-----EKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|297579974|ref|ZP_06941901.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae RC385] gi|297535620|gb|EFH74454.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae RC385] Length = 959 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|196231028|ref|ZP_03129888.1| protein of unknown function DUF162 [Chthoniobacter flavus Ellin428] gi|196224858|gb|EDY19368.1| protein of unknown function DUF162 [Chthoniobacter flavus Ellin428] Length = 471 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 21/102 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 C+ C C CP + Y GP + YR L D Sbjct: 308 QRDALHCIRCGACLNVCPIFKNIGGHAYGTTYQGPIGSVITPHYRGLQD---------WK 358 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L L CT++CP ++ + + + + K Sbjct: 359 HLSGASSL-----CGACTEACPVKIDIHHHLLQNRRNAVAEK 395 >gi|78044464|ref|YP_360656.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Carboxydothermus hydrogenoformans Z-2901] gi|77996579|gb|ABB15478.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 405 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C+ C+ +CP N D + GP + + L S + ++ P + Sbjct: 10 LNHCAKCSTCTANCPVAKVNPD-FPGPKAVGPDWLRL--SLNAETK-----VDYPEGIEY 61 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC +CP G+ A + L +K Sbjct: 62 CSNCKNCEIACPSGVPVASLNQLTRAEKLKKK 93 >gi|87119335|ref|ZP_01075233.1| Fe-S oxidoreductase [Marinomonas sp. MED121] gi|86165726|gb|EAQ66993.1| Fe-S oxidoreductase [Marinomonas sp. MED121] Length = 943 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 12/96 (12%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLED 220 + C+ C C ++CPS D L P + R L SR ERL LE Sbjct: 535 NPLIDACIECGFCESNCPS----KDLTLSPRQRIVISREL--SRLANAPEEKERLTALEK 588 Query: 221 PF---RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + C C+ +CP G+N ++ Sbjct: 589 DYQYQAIDTCAGCGLCSMACPVGINTGDLTRHLRQE 624 >gi|329923273|ref|ZP_08278758.1| cysteine-rich domain protein [Paenibacillus sp. HGF5] gi|328941508|gb|EGG37799.1| cysteine-rich domain protein [Paenibacillus sp. HGF5] Length = 726 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 191 LGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 +GP + +Q W ++ D + + + ++ C T NC CP I Sbjct: 351 IGPTMDVQKRSWHQVEGVDPKDIQLIGGVMTEEEIWACTTCRNCEDQCPVANEHVDKIVD 410 Query: 250 IKMMLL 255 ++ L+ Sbjct: 411 LRRHLV 416 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I K++ L ++ Sbjct: 271 FYACVECGRCTNVCPASNTGKLLSPMHMIVKLRDHLTEKG 310 >gi|148975240|ref|ZP_01812164.1| Fe-S oxidoreductase [Vibrionales bacterium SWAT-3] gi|145965164|gb|EDK30414.1| Fe-S oxidoreductase [Vibrionales bacterium SWAT-3] Length = 951 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 9/88 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE----RLDNLEDPFR 223 C+ C C CPS L P + YR + R E E L+ + Sbjct: 550 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYR-ELQRRREAGEEIEASELEKTFEYQG 604 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C + CP G+N + K++ Sbjct: 605 IDTCAATGLCAERCPVGINTGDLVKKLR 632 >gi|332703181|ref|ZP_08423269.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332553330|gb|EGJ50374.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 430 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 13/87 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L +C C C++ CP+ P L+ + ++ LE+P+ ++ Sbjct: 27 HLTQCFTCGACASGCPATGLEGMD---PRKFLRMLAFGLE---------KQALENPW-IW 73 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 C C +CP G++ + I + Sbjct: 74 MCTMCRRCVHACPMGVDIPQMIYYARQ 100 >gi|269137687|ref|YP_003294387.1| putative electron transport protein YkgF [Edwardsiella tarda EIB202] gi|267983347|gb|ACY83176.1| putative electron transport protein YkgF [Edwardsiella tarda EIB202] gi|304557743|gb|ADM40407.1| Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Edwardsiella tarda FL6-60] Length = 473 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + D Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYANFKDLP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + +K I + + +++ + Sbjct: 364 LCTACDSVCPVNIPLSKLILRHRQAMVEAGL 394 >gi|229187571|ref|ZP_04314711.1| hypothetical protein bcere0004_51040 [Bacillus cereus BGSC 6E1] gi|228595938|gb|EEK53618.1| hypothetical protein bcere0004_51040 [Bacillus cereus BGSC 6E1] Length = 673 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 38/134 (28%) Query: 160 DRQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSD 188 + ++ LY CV C C+ CP+ W Sbjct: 237 KQNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVV 296 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGL 241 + A + E L ++ ++ C T NC CP Sbjct: 297 AFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMN 356 Query: 242 NPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 357 EHVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L D+ Sbjct: 244 LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|167950511|ref|ZP_02537585.1| glycolate oxidase iron-sulfur subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 239 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y + P + + L D +LE Sbjct: 9 EADRCVKCGLCLPHCPTYRLLRNEADSPRGRIALIQALADGSLPADPTLSRHLE------ 62 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP G+ I + +L R+ Sbjct: 63 GCLHCRRCDSACPSGVAYGAMIDGARQLLNSRR 95 >gi|301056813|ref|YP_003795024.1| ferredoxin, 4Fe-4S [Bacillus anthracis CI] gi|300378982|gb|ADK07886.1| ferredoxin, 4Fe-4S [Bacillus cereus biovar anthracis str. CI] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|228917954|ref|ZP_04081490.1| hypothetical protein bthur0012_51550 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930354|ref|ZP_04093358.1| hypothetical protein bthur0010_50330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936630|ref|ZP_04099424.1| hypothetical protein bthur0009_50650 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949066|ref|ZP_04111338.1| hypothetical protein bthur0007_51870 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094459|ref|ZP_04225530.1| hypothetical protein bcere0021_51630 [Bacillus cereus Rock3-42] gi|229124849|ref|ZP_04254027.1| hypothetical protein bcere0016_51290 [Bacillus cereus 95/8201] gi|228658640|gb|EEL14302.1| hypothetical protein bcere0016_51290 [Bacillus cereus 95/8201] gi|228688941|gb|EEL42769.1| hypothetical protein bcere0021_51630 [Bacillus cereus Rock3-42] gi|228810639|gb|EEM56988.1| hypothetical protein bthur0007_51870 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823065|gb|EEM68903.1| hypothetical protein bthur0009_50650 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829340|gb|EEM74973.1| hypothetical protein bthur0010_50330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841751|gb|EEM86862.1| hypothetical protein bthur0012_51550 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 673 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229199470|ref|ZP_04326133.1| hypothetical protein bcere0001_49690 [Bacillus cereus m1293] gi|228584046|gb|EEK42201.1| hypothetical protein bcere0001_49690 [Bacillus cereus m1293] Length = 697 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 262 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 321 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 322 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 381 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 382 HVDKIIDLRRYLV 394 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 261 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 307 >gi|221198435|ref|ZP_03571481.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2M] gi|221208888|ref|ZP_03581885.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2] gi|221171171|gb|EEE03621.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2] gi|221182367|gb|EEE14768.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD2M] Length = 470 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|221214781|ref|ZP_03587750.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD1] gi|221165320|gb|EED97797.1| iron-sulfur cluster-binding protein [Burkholderia multivorans CGD1] Length = 465 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 299 FQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 352 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 353 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 387 >gi|170708084|ref|ZP_02898532.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0389] gi|177651919|ref|ZP_02934502.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0174] gi|170127057|gb|EDS95936.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0389] gi|172082623|gb|EDT67687.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0174] Length = 673 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|196040972|ref|ZP_03108269.1| ferredoxin, 4Fe-4S [Bacillus cereus NVH0597-99] gi|196028140|gb|EDX66750.1| ferredoxin, 4Fe-4S [Bacillus cereus NVH0597-99] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|165871327|ref|ZP_02215976.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0488] gi|227818108|ref|YP_002818117.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. CDC 684] gi|254755815|ref|ZP_05207847.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Vollum] gi|164712994|gb|EDR18522.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0488] gi|227007572|gb|ACP17315.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. CDC 684] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|52140216|ref|YP_086614.1| ferredoxin, 4Fe-4S [Bacillus cereus E33L] gi|118480379|ref|YP_897530.1| ferredoxin, 4Fe-4S [Bacillus thuringiensis str. Al Hakam] gi|196036532|ref|ZP_03103927.1| ferredoxin, 4Fe-4S [Bacillus cereus W] gi|196045446|ref|ZP_03112677.1| ferredoxin, 4Fe-4S [Bacillus cereus 03BB108] gi|218906524|ref|YP_002454358.1| ferredoxin, 4Fe-4S [Bacillus cereus AH820] gi|225867327|ref|YP_002752705.1| ferredoxin, 4Fe-4S [Bacillus cereus 03BB102] gi|254724700|ref|ZP_05186483.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A1055] gi|51973685|gb|AAU15235.1| ferredoxin, 4Fe-4S [Bacillus cereus E33L] gi|118419604|gb|ABK88023.1| ferredoxin, 4Fe-4S [Bacillus thuringiensis str. Al Hakam] gi|195990865|gb|EDX54838.1| ferredoxin, 4Fe-4S [Bacillus cereus W] gi|196023653|gb|EDX62329.1| ferredoxin, 4Fe-4S [Bacillus cereus 03BB108] gi|218536776|gb|ACK89174.1| ferredoxin, 4Fe-4S [Bacillus cereus AH820] gi|225785770|gb|ACO25987.1| ferredoxin, 4Fe-4S [Bacillus cereus 03BB102] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|30265369|ref|NP_847746.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Ames] gi|47530912|ref|YP_022261.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. 'Ames Ancestor'] gi|49188180|ref|YP_031433.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Sterne] gi|65317323|ref|ZP_00390282.1| COG0247: Fe-S oxidoreductase [Bacillus anthracis str. A2012] gi|167635715|ref|ZP_02394025.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0442] gi|167640390|ref|ZP_02398654.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0193] gi|170688208|ref|ZP_02879419.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0465] gi|190569105|ref|ZP_03022004.1| ferredoxin, 4Fe-4S [Bacillus anthracis Tsiankovskii-I] gi|229603880|ref|YP_002869560.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0248] gi|254687213|ref|ZP_05151071.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. CNEVA-9066] gi|254733610|ref|ZP_05191328.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Western North America USA6153] gi|254742270|ref|ZP_05199957.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Kruger B] gi|254744479|ref|ZP_05202159.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Kruger B] gi|254762155|ref|ZP_05214001.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Australia 94] gi|30260047|gb|AAP29232.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Ames] gi|47506060|gb|AAT34736.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. 'Ames Ancestor'] gi|49182107|gb|AAT57483.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. Sterne] gi|167511610|gb|EDR86992.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0193] gi|167528824|gb|EDR91581.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0442] gi|170667901|gb|EDT18653.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0465] gi|190559773|gb|EDV13759.1| ferredoxin, 4Fe-4S [Bacillus anthracis Tsiankovskii-I] gi|229268288|gb|ACQ49925.1| ferredoxin, 4Fe-4S [Bacillus anthracis str. A0248] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|258406132|ref|YP_003198874.1| hypothetical protein Dret_2012 [Desulfohalobium retbaense DSM 5692] gi|257798359|gb|ACV69296.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfohalobium retbaense DSM 5692] Length = 384 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 10/96 (10%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD--EFQGERL 215 E ECVMC C CP + + L P + + D E RL Sbjct: 1 MERFASDIHRGECVMCGKCLEVCPLFQATDNEELSPRAKADLLQAMAGGGDLSEAAVRRL 60 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C CP+ ++ + + +K Sbjct: 61 AGI--------CLGCQRCRDVCPQNVDVPRQLQALK 88 >gi|291515636|emb|CBK64846.1| hypothetical protein AL1_26650 [Alistipes shahii WAL 8301] Length = 232 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 K ED + +GL+ C+ C C+ CP+ + + P ++ ++ +RD+ Sbjct: 1 MGKYFDMLMEDVRMKEGLHSCMNCGVCTGVCPAAEFYN---YDPRQIVS----IVQTRDD 53 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ERL ++ C M+C CP+G P I ++ Sbjct: 54 EAIERLLK---SDTIWYCGECMSCRPRCPRGNTPGYVIQALR 92 >gi|270264275|ref|ZP_06192542.1| hypothetical protein SOD_g02120 [Serratia odorifera 4Rx13] gi|270041924|gb|EFA15021.1| hypothetical protein SOD_g02120 [Serratia odorifera 4Rx13] Length = 399 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 QK + C+ C C+T CP N Y GP D + D Sbjct: 4 QKDNSFENCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYD 53 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + K Sbjct: 54 EALKYCTNCKRCEVACPSDVKIGDIIQRARADYAQNK 90 >gi|229076559|ref|ZP_04209519.1| hypothetical protein bcere0024_49980 [Bacillus cereus Rock4-18] gi|228706592|gb|EEL58805.1| hypothetical protein bcere0024_49980 [Bacillus cereus Rock4-18] Length = 629 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|229105937|ref|ZP_04236561.1| hypothetical protein bcere0019_50610 [Bacillus cereus Rock3-28] gi|228677511|gb|EEL31764.1| hypothetical protein bcere0019_50610 [Bacillus cereus Rock3-28] Length = 697 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 262 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 321 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 322 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 381 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 382 HVDKIIDLRRYLV 394 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 261 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 307 >gi|229099778|ref|ZP_04230703.1| hypothetical protein bcere0020_49960 [Bacillus cereus Rock3-29] gi|229118840|ref|ZP_04248189.1| hypothetical protein bcere0017_51050 [Bacillus cereus Rock1-3] gi|228664641|gb|EEL20134.1| hypothetical protein bcere0017_51050 [Bacillus cereus Rock1-3] gi|228683667|gb|EEL37620.1| hypothetical protein bcere0020_49960 [Bacillus cereus Rock3-29] Length = 673 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|170701995|ref|ZP_02892915.1| protein of unknown function DUF162 [Burkholderia ambifaria IOP40-10] gi|170133085|gb|EDT01493.1| protein of unknown function DUF162 [Burkholderia ambifaria IOP40-10] Length = 470 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDRALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|167465687|ref|ZP_02330776.1| YsfD [Paenibacillus larvae subsp. larvae BRL-230010] Length = 198 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C +CP++ P + + + D E + + Sbjct: 15 EDQLTNCMRCGFCLPACPTFRETGVEAESPRGRIALMKAVADGIMEPDQLFQEQMN---- 70 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP ++ + + + + + Sbjct: 71 --HCLGCRACEPACPADVHYGSLLEQARNSIEQHGV 104 >gi|115352218|ref|YP_774057.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria AMMD] gi|115282206|gb|ABI87723.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ambifaria AMMD] Length = 470 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDRALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|325001574|ref|ZP_08122686.1| FAD linked oxidase domain-containing protein [Pseudonocardia sp. P1] Length = 700 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 16/136 (11%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y R I+ +L D + C C C C Sbjct: 505 DELYDVMREIKRLFDPHGVLNPGVVLSDDPDMHLKHIKLSPVVDAEVDRCTSCGFCEPVC 564 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PS D L P + A R + ++ D RL++ +D + C C +C Sbjct: 565 PSR----DLTLTPRQRIAARRAIREAELAGDTALAGRLESEQDYESVQTCAVDGMCQTAC 620 Query: 238 PKGLNPAKAIAKIKMM 253 P +N + K++ Sbjct: 621 PVLINTGDLVKKLRRD 636 >gi|308271658|emb|CBX28266.1| hypothetical protein N47_G35900 [uncultured Desulfobacterium sp.] Length = 440 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 13/121 (10%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + + L + L C+ C C++ CP+ + P L Sbjct: 1 MMGEAAIKIGKDKKTTFLDKVKHLVPTSNLSLCLTCGACASGCPA---TGLENMDPRKFL 57 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + +D D + + ++ C CT +CP ++ A I + + + Sbjct: 58 RMVTLGLD----------DEITEHPWVWMCTMCYRCTYACPMKIDIAAMIFEARKLWPRE 107 Query: 258 K 258 K Sbjct: 108 K 108 >gi|303249743|ref|ZP_07335947.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252624|ref|ZP_07338787.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247382|ref|ZP_07529429.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251930|ref|ZP_07533831.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260855|ref|ZP_07542541.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302648592|gb|EFL78785.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651310|gb|EFL81462.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856079|gb|EFM88235.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860622|gb|EFM92634.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869422|gb|EFN01213.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 424 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGERLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + ++R+ Sbjct: 70 YDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRHVERQ 108 >gi|298384122|ref|ZP_06993683.1| iron-sulfur cluster binding protein [Bacteroides sp. 1_1_14] gi|298263726|gb|EFI06589.1| iron-sulfur cluster binding protein [Bacteroides sp. 1_1_14] Length = 461 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + +L + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSTILSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + D + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMAHDP-----EKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|261213020|ref|ZP_05927304.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio sp. RC341] gi|260838085|gb|EEX64762.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio sp. RC341] Length = 948 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRTAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|258622449|ref|ZP_05717471.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585149|gb|EEW09876.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 959 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRTAGESVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|254284608|ref|ZP_04959575.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] gi|150425393|gb|EDN17169.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] Length = 959 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRTAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|121587018|ref|ZP_01676796.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 2740-80] gi|121548753|gb|EAX58800.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio cholerae 2740-80] Length = 959 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRTAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINTGDLVKKLR 626 >gi|114773249|ref|ZP_01450484.1| oxidoreductase, FAD-binding protein [alpha proteobacterium HTCC2255] gi|114546368|gb|EAU49277.1| oxidoreductase, FAD-binding protein [alpha proteobacterium HTCC2255] Length = 943 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 12/94 (12%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-----EFQGERLDNLEDPF 222 +C+ C C CPS P + +R + + + Q + L L+ + Sbjct: 539 DKCIECGFCEPVCPSKELT----FTPRQRIAIWRRIQQLEELGYLIDAQRQELAQLKHDY 594 Query: 223 ---RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C + CP G+N I +++ Sbjct: 595 QYYGIDTCAATGLCAERCPVGINTGDLIRELRAE 628 >gi|27367210|ref|NP_762737.1| putative D-lactate dehydrogenase, Fe-S protein [Vibrio vulnificus CMCP6] gi|27358778|gb|AAO07727.1| Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Vibrio vulnificus CMCP6] Length = 946 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 13/127 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + F Q + +P E L+ + C+ C C CPS Sbjct: 509 TIFDPQGLLNPGVIINDNPHSHIENLKPMPAA--DPLVDRCIECGFCEPVCPSRTLT--- 563 Query: 190 YLGPAILLQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 L P + YR L R E GE+ L+ + + + C C + CP G+N Sbjct: 564 -LSPRQRIVLYRELQ--RRERAGEKIQASELEKVFEYQGIDTCAATGLCAERCPVGINTG 620 Query: 245 KAIAKIK 251 + K++ Sbjct: 621 DLVKKLR 627 >gi|57241957|ref|ZP_00369897.1| iron-sulfur cluster binding protein [Campylobacter upsaliensis RM3195] gi|57017149|gb|EAL53930.1| iron-sulfur cluster binding protein [Campylobacter upsaliensis RM3195] Length = 473 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 19/105 (18%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQA-YRWLIDS 206 + C+ C C CP Y Y GP + + + +D Sbjct: 291 HHRSDMLAHKDYYEALRCIRCGACMNFCPVYDKIGGHSYQTVYPGPIGEVISPNLFGMD- 349 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 G+ L+ C C++ CP + A I K++ Sbjct: 350 ---KTGDILNF---------CSLCGRCSEVCPVKIPLADLIRKLR 382 >gi|46143614|ref|ZP_00204530.1| COG0247: Fe-S oxidoreductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207865|ref|YP_001053090.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae L20] gi|307245210|ref|ZP_07527301.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249601|ref|ZP_07531588.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307254156|ref|ZP_07536001.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258619|ref|ZP_07540354.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126096657|gb|ABN73485.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306853854|gb|EFM86068.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858456|gb|EFM90525.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306862856|gb|EFM94805.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867276|gb|EFM99129.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 424 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGERLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + ++R+ Sbjct: 70 YDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRHVERQ 108 >gi|269925685|ref|YP_003322308.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789345|gb|ACZ41486.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 433 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D D + CV C C + CP+Y P + + + + + + + LD+ Sbjct: 15 DPPAYDIINACVQCGLCLSVCPTYLLTFKETSSPRGRIHLLKAVWEGKLDARDPILDHQM 74 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C CP G+ + + L +RK Sbjct: 75 -----YECLDCRACEAICPSGVRYGVLVESARAQL-ERK 107 >gi|228998172|ref|ZP_04157770.1| Iron-sulfur cluster binding protein [Bacillus mycoides Rock3-17] gi|228761564|gb|EEM10512.1| Iron-sulfur cluster binding protein [Bacillus mycoides Rock3-17] Length = 467 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 307 KCIRCGACVNVCPVYRNIGGHAYGSTYSGPIGAVLA------PLLEGYEE-LKELPFASS 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + +++ Sbjct: 360 L-----CGACTDVCPVKIPLHDLLIEHRKDEVEQG 389 >gi|229005668|ref|ZP_04163372.1| Iron-sulfur cluster binding protein [Bacillus mycoides Rock1-4] gi|228755602|gb|EEM04943.1| Iron-sulfur cluster binding protein [Bacillus mycoides Rock1-4] Length = 467 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 307 KCIRCGACVNVCPVYRNIGGHAYGSTYSGPIGAVLA------PLLEGYEE-LKELPFASS 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + +++ Sbjct: 360 L-----CGACTDVCPVKIPLHDLLIEHRKDEVEQG 389 >gi|45358717|ref|NP_988274.1| heterosulfide reductase subunit C1 [Methanococcus maripaludis S2] gi|45047583|emb|CAF30710.1| heterosulfide reductase, subunit C1 [Methanococcus maripaludis S2] Length = 192 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 14/97 (14%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C C C+ +CPS + L L+++ IDS + Sbjct: 26 DHASSFQKCYQCGTCTGACPSGRITA---LRTRKLIRSALAGIDS-----------ILSG 71 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+ + I I+ + ++ Sbjct: 72 DDLWMCTTCYECYEKCPREVKITDIIKIIRNIAAEKG 108 >gi|90411786|ref|ZP_01219795.1| putative ferredoxin [Photobacterium profundum 3TCK] gi|90327348|gb|EAS43712.1| putative ferredoxin [Photobacterium profundum 3TCK] Length = 937 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 42/120 (35%), Gaps = 11/120 (9%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I ++ P + + D + C+ C C CPS L P Sbjct: 508 RGILNPGVIINDDPQSHIKNLKPMPKADDLIDRCIECGFCEPVCPSRTLT----LSPRQR 563 Query: 197 LQAYRWLIDSRDEFQGE-----RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR + R E GE L ++ + L C C CP G+N + K++ Sbjct: 564 IVLYREIQ--RREAAGETANSAALRDVFEYQGLDTCAATGLCADRCPVGINTGDLVKKLR 621 >gi|54308600|ref|YP_129620.1| putative ferredoxin [Photobacterium profundum SS9] gi|46913029|emb|CAG19818.1| putative ferredoxin [Photobacterium profundum SS9] Length = 943 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 42/120 (35%), Gaps = 11/120 (9%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I ++ P + + D + C+ C C CPS L P Sbjct: 514 RGILNPGVIINDDPQSHIKNLKPMPKADDLIDRCIECGFCEPVCPSRTLT----LSPRQR 569 Query: 197 LQAYRWLIDSRDEFQGE-----RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + YR + R E GE L ++ + L C C CP G+N + K++ Sbjct: 570 IVLYREIQ--RREAAGETAKSAALRDVFEYQGLDTCAATGLCADRCPVGINTGDLVKKLR 627 >gi|260866475|ref|YP_003232877.1| putative amino acid dehydrogenase [Escherichia coli O111:H- str. 11128] gi|257762831|dbj|BAI34326.1| predicted amino acid dehydrogenase [Escherichia coli O111:H- str. 11128] gi|323178435|gb|EFZ64013.1| iron-sulfur cluster binding protein [Escherichia coli 1180] Length = 475 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + ++ Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYK----- 353 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 354 --NFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGI 394 >gi|190149674|ref|YP_001968199.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262981|ref|ZP_07544603.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914805|gb|ACE61057.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871607|gb|EFN03329.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 424 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGERLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + ++R+ Sbjct: 70 YDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRHVERQ 108 >gi|165975840|ref|YP_001651433.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875941|gb|ABY68989.1| anaerobic glycerol-3-phosphate dehydrogenase,subunit C [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 424 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGERLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + ++R+ Sbjct: 70 YDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRHVERQ 108 >gi|307256425|ref|ZP_07538207.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865055|gb|EFM96956.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 424 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGERLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + ++R+ Sbjct: 70 YDEALKYCTNCKRCEIACPSDVKIGDIIVRARNRHVERQ 108 >gi|324329295|gb|ADY24555.1| ferredoxin, 4Fe-4S [Bacillus thuringiensis serovar finitimus YBT-020] Length = 703 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDIITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|324117031|gb|EGC10943.1| iron-sulfur cluster-binding protein [Escherichia coli E1167] Length = 475 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 56/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLIAMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILSHRRVMAEKGI 394 >gi|320354063|ref|YP_004195402.1| hypothetical protein Despr_1963 [Desulfobulbus propionicus DSM 2032] gi|320122565|gb|ADW18111.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobulbus propionicus DSM 2032] Length = 419 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 8/94 (8%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + +CV C C CP Y + +++ + ERL Sbjct: 9 HYREAIAQCVRCGACQAHCPVYRETGREGSVARGKIVLAAAVLNG-EVGLDERLR----- 62 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAI-AKIKMML 254 + C +C CP + P AI ++ + Sbjct: 63 EEIGLCLLCGSCVVKCPNRV-PTDAIVGALRRQI 95 >gi|254362018|ref|ZP_04978147.1| possible electron transport proton [Mannheimia haemolytica PHL213] gi|261491676|ref|ZP_05988258.1| putative iron-sulfur binding reductase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494205|ref|ZP_05990705.1| putative iron-sulfur binding reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|110735269|gb|ABG89205.1| putative iron-sulfur binding reductase [Mannheimia haemolytica] gi|153093569|gb|EDN74543.1| possible electron transport proton [Mannheimia haemolytica PHL213] gi|261310108|gb|EEY11311.1| putative iron-sulfur binding reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312691|gb|EEY13812.1| putative iron-sulfur binding reductase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 469 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E + Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEFKELP------YACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + D + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIADAGL 395 >gi|78066905|ref|YP_369674.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia sp. 383] gi|77967650|gb|ABB09030.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia sp. 383] Length = 470 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L S D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP G+ + + ++ ++R + Sbjct: 361 -----------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|255532835|ref|YP_003093207.1| hypothetical protein Phep_2947 [Pedobacter heparinus DSM 2366] gi|255345819|gb|ACU05145.1| protein of unknown function DUF162 [Pedobacter heparinus DSM 2366] Length = 458 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 12/133 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + S + + R + + L R +C+ CA C +CP Y Sbjct: 266 ITTYSSHFKKPRPGQEMHIVLVDNGRTTQLS----RPDFRNSLKCIRCAACMNTCPVYRR 321 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + A+ L + D + L + +C+ CP +N + Sbjct: 322 SGGHSYHTAVAGPIGSILAPNLDMREYADLP--------FASTLCGSCSNVCPVKINIHE 373 Query: 246 AIAKIKMMLLDRK 258 + K + +++ Sbjct: 374 QLYKWRQVIVKEG 386 >gi|162448638|ref|YP_001611005.1| putative iron-sulfur protein, transmembrane protein [Sorangium cellulosum 'So ce 56'] gi|161159220|emb|CAN90525.1| Putative iron-sulfur protein, transmembrane protein [Sorangium cellulosum 'So ce 56'] Length = 793 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + N+ P L+ C T C + CP ++ I ++ L+ Sbjct: 433 DLVANVVHPDVLWACTTCRACEEQCPVMISYVDKIVSMRRHLV 475 >gi|53803916|ref|YP_114187.1| iron-sulfur cluster binding protein [Methylococcus capsulatus str. Bath] gi|53757677|gb|AAU91968.1| iron-sulfur cluster binding protein [Methylococcus capsulatus str. Bath] Length = 399 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C CS CP+Y +D P + + R L+D Sbjct: 11 DADLCVKCGLCSPHCPTYRQTADENESPRGRIALIQGWATGRLSLTAALRGPLDD----- 65 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC CP + ++ + + + R+ Sbjct: 66 -CLLCRNCEAVCPAKVPYSRLVDRFRAETGQRR 97 >gi|293393915|ref|ZP_06638222.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Serratia odorifera DSM 4582] gi|291423742|gb|EFE96964.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Serratia odorifera DSM 4582] Length = 399 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 29/95 (30%), Gaps = 10/95 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C+T CP N Y GP D + D Sbjct: 6 DNSFENCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDEA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP +N I + + L K Sbjct: 56 LKYCTNCKRCEVACPSEVNIGDIIQRARASLSQSK 90 >gi|261823371|ref|YP_003261477.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Pectobacterium wasabiae WPP163] gi|261607384|gb|ACX89870.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Pectobacterium wasabiae WPP163] Length = 403 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + R D Sbjct: 6 DNSFEDCIKCTVCTTYCPVSRVNP-LYPGPKQA---------GPDGERLRRKDPALYDDA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|226946334|ref|YP_002801407.1| Fe-S/FAD domain-containing protein [Azotobacter vinelandii DJ] gi|226721261|gb|ACO80432.1| Fe-S/FAD domain protein [Azotobacter vinelandii DJ] Length = 938 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + RD L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVMWRDIQARRRDNAGSTALEKAYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP G+N + K++ Sbjct: 594 CAATGLCAQRCPVGINTGDLVRKLR 618 >gi|313679086|ref|YP_004056825.1| hypothetical protein Ocepr_0189 [Oceanithermus profundus DSM 14977] gi|313151801|gb|ADR35652.1| protein of unknown function DUF162 [Oceanithermus profundus DSM 14977] Length = 461 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 32/98 (32%), Gaps = 18/98 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 DR+ + L C+ C C +CP Y Y GP ++ L D R Sbjct: 299 ADREMHEALA-CIRCGACLNACPVYRQTGGHAYGQVYSGPIGIV-LTPGLKDPR------ 350 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L + Y C C CP + K I + Sbjct: 351 ----LAEDLG-YACSLCTACADVCPVKIPLPKQILAWR 383 >gi|300817170|ref|ZP_07097388.1| iron-sulfur cluster-binding protein [Escherichia coli MS 107-1] gi|300530146|gb|EFK51208.1| iron-sulfur cluster-binding protein [Escherichia coli MS 107-1] gi|324020397|gb|EGB89616.1| iron-sulfur cluster-binding protein [Escherichia coli MS 117-3] Length = 475 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 56/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + ++ ++ I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILSHRRVMAEKGI 394 >gi|119873208|ref|YP_931215.1| hypothetical protein Pisl_1721 [Pyrobaculum islandicum DSM 4184] gi|119674616|gb|ABL88872.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum islandicum DSM 4184] Length = 549 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 12/105 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 DR+ + C C CP+ R L P +++ ++ +L Sbjct: 157 DREVLLSCQSCGEIGACDEGCPAVAA--GRLLSPRFVVRTVSLNSNNPGFELAIKL---- 210 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-----LDRKI 259 + + C T C SCP +N I ++ L +DRKI Sbjct: 211 -EHQAWACTTCGMCVYSCPVRVNHLDVIYGVRRALVAQGRVDRKI 254 >gi|50123083|ref|YP_052250.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Pectobacterium atrosepticum SCRI1043] gi|49613609|emb|CAG77060.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Pectobacterium atrosepticum SCRI1043] Length = 403 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + R D Sbjct: 6 DNSFEDCIKCTVCTTYCPVSRVNP-LYPGPKQA---------GPDGERLRRKDPALYDDA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|116620494|ref|YP_822650.1| hypothetical protein Acid_1372 [Candidatus Solibacter usitatus Ellin6076] gi|116223656|gb|ABJ82365.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 623 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 3/91 (3%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRL 224 + CV C CS CP+ + L P ++ R +L + + L Sbjct: 244 QTFSCVECGRCSEFCPAVAT--GKVLNPKEIVLGMRSYLNEFGAAGEVPLLGKHISEVAA 301 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++C T C CP G+ I ++ + Sbjct: 302 FQCTTCGGCEFQCPVGIQHLPMIVGLRRGAV 332 >gi|328952367|ref|YP_004369701.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452691|gb|AEB08520.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] Length = 418 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 25/91 (27%), Gaps = 6/91 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C CP Y L + + G L+ LE Sbjct: 12 ATACIRCGACMEVCPLYQKTGREAAVARGKLSLLQAFLGGTLSPSGRLLEILE------Y 65 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + C + + + + DR Sbjct: 66 CLLCGACVERCTAKIPIPDLVKAGRAEIYDR 96 >gi|326943143|gb|AEA19039.1| Iron-sulfur-binding reductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 703 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|228911185|ref|ZP_04074990.1| hypothetical protein bthur0013_53240 [Bacillus thuringiensis IBL 200] gi|228848361|gb|EEM93210.1| hypothetical protein bthur0013_53240 [Bacillus thuringiensis IBL 200] Length = 629 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|228968475|ref|ZP_04129463.1| hypothetical protein bthur0004_52500 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791181|gb|EEM38795.1| hypothetical protein bthur0004_52500 [Bacillus thuringiensis serovar sotto str. T04001] Length = 629 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|228975425|ref|ZP_04135980.1| hypothetical protein bthur0003_51700 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228784219|gb|EEM32243.1| hypothetical protein bthur0003_51700 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 629 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|228942492|ref|ZP_04105028.1| hypothetical protein bthur0008_51220 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228982059|ref|ZP_04142351.1| hypothetical protein bthur0002_52160 [Bacillus thuringiensis Bt407] gi|228777597|gb|EEM25872.1| hypothetical protein bthur0002_52160 [Bacillus thuringiensis Bt407] gi|228817175|gb|EEM63264.1| hypothetical protein bthur0008_51220 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 673 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229033978|ref|ZP_04188931.1| hypothetical protein bcere0028_50070 [Bacillus cereus AH1271] gi|228728353|gb|EEL79376.1| hypothetical protein bcere0028_50070 [Bacillus cereus AH1271] Length = 697 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 262 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 321 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 322 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 381 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 382 HVDKIIDLRRYLV 394 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 261 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 307 >gi|228988572|ref|ZP_04148659.1| hypothetical protein bthur0001_52270 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158906|ref|ZP_04286963.1| hypothetical protein bcere0010_50780 [Bacillus cereus ATCC 4342] gi|228624517|gb|EEK81287.1| hypothetical protein bcere0010_50780 [Bacillus cereus ATCC 4342] gi|228771189|gb|EEM19668.1| hypothetical protein bthur0001_52270 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 673 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229164294|ref|ZP_04292226.1| hypothetical protein bcere0009_50540 [Bacillus cereus R309803] gi|228619177|gb|EEK76071.1| hypothetical protein bcere0009_50540 [Bacillus cereus R309803] Length = 673 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229176021|ref|ZP_04303516.1| hypothetical protein bcere0006_50900 [Bacillus cereus MM3] gi|228607453|gb|EEK64780.1| hypothetical protein bcere0006_50900 [Bacillus cereus MM3] Length = 673 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|218900471|ref|YP_002448882.1| ferredoxin, 4Fe-4S [Bacillus cereus G9842] gi|228905099|ref|ZP_04069131.1| hypothetical protein bthur0014_62110 [Bacillus thuringiensis IBL 4222] gi|218541535|gb|ACK93929.1| ferredoxin, 4Fe-4S [Bacillus cereus G9842] gi|228854542|gb|EEM99168.1| hypothetical protein bthur0014_62110 [Bacillus thuringiensis IBL 4222] Length = 629 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|42784521|ref|NP_981768.1| ferredoxin, 4Fe-4S [Bacillus cereus ATCC 10987] gi|42740453|gb|AAS44376.1| ferredoxin, 4Fe-4S [Bacillus cereus ATCC 10987] Length = 703 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|47569770|ref|ZP_00240442.1| ferredoxin, 4Fe-4S [Bacillus cereus G9241] gi|47553566|gb|EAL11945.1| ferredoxin, 4Fe-4S [Bacillus cereus G9241] Length = 703 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|307247451|ref|ZP_07529496.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855954|gb|EFM88112.1| Lactate utilization protein B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 469 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEF------EELPYACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|303253380|ref|ZP_07339527.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647767|gb|EFL77976.1| iron-sulfur electron transport protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 469 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E Y C Sbjct: 312 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PLLGGYEEF------EELPYACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + A+ I K + + + + Sbjct: 365 LCTACNSVCPVKIPLAQLILKHREKIAEAGL 395 >gi|311695778|gb|ADP98651.1| iron-sulfur cluster binding protein [marine bacterium HP15] Length = 479 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y Y GP + + DE + +L Sbjct: 318 RCIRCGACMNHCPVYTRVGGHAYGTTYPGPIGKILMPHLI--GLDEGR-----HLPSASS 370 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C + CP + + +++ +D Sbjct: 371 L-----CGACGEVCPVKIPIPDLLVRLRQESVD 398 >gi|253690316|ref|YP_003019506.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756894|gb|ACT14970.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 403 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + R D Sbjct: 6 DNSFEDCIKCTVCTTYCPVSRVNP-LYPGPKQA---------GPDGERLRRKDPALYDDA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|121534420|ref|ZP_01666243.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] gi|121306913|gb|EAX47832.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] Length = 722 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 9/104 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ +Y+CV CA C CP Y G L Sbjct: 302 RLQLAKDERFKEVYQCVRCASCLNVCPVYTLVGGHVYGHIYAGGIGAIL--------TAF 353 Query: 215 LDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+++ D ++ C CT CP +N I +++ + Sbjct: 354 LNSMGDFEKINELCIGCRKCTTICPGKINIPDLIEELRARAVKE 397 >gi|182415486|ref|YP_001820552.1| putative heterodisulfide reductase, C subunit [Opitutus terrae PB90-1] gi|177842700|gb|ACB76952.1| putative heterodisulfide reductase, C subunit [Opitutus terrae PB90-1] Length = 195 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS +CP + P ++ R + + + ++ C + Sbjct: 34 CIQCGTCSGTCPLSVYMDHS---PRQIMALVR----------SDFKNEVLTSNSIWLCAS 80 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CP+ + + +K + ++ Sbjct: 81 CYACTVECPREIRITDIMYALKQRAIQERV 110 >gi|15899866|ref|NP_344471.1| glycolate oxidase iron-sulfur subunit. (glcF) [Sulfolobus solfataricus P2] gi|284174101|ref|ZP_06388070.1| glycolate oxidase iron-sulfur subunit. (glcF) [Sulfolobus solfataricus 98/2] gi|13816590|gb|AAK43261.1| Glycolate oxidase iron-sulfur subunit. (glcF) [Sulfolobus solfataricus P2] gi|261601543|gb|ACX91146.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 344 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 15/92 (16%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C +CP+Y + P ++A R I+S C Sbjct: 9 EMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRIGINS---------------TGFETC 53 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G+ A+ I ++ L + + Sbjct: 54 MYCRLCETACPAGVKYAQIITPVRKSSLKKTV 85 >gi|284038790|ref|YP_003388720.1| hypothetical protein Slin_3931 [Spirosoma linguale DSM 74] gi|283818083|gb|ADB39921.1| protein of unknown function DUF162 [Spirosoma linguale DSM 74] Length = 459 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 12/133 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + S + + R + + L R +C+ CA C +CP Y Sbjct: 267 ITTFSSHFHRPRPGQEMHIVIVDNGRSRQLG----RPDFRNSLKCIRCAACLNTCPVYRR 322 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + A+ L + D + L + +C+ CP ++ Sbjct: 323 SGGFSYHSAVAGPIGSILAPNLDMKKNADLP--------FASTLCGSCSNVCPVKIDIHD 374 Query: 246 AIAKIKMMLLDRK 258 + K + +L+ Sbjct: 375 QLYKWRQVLMQEG 387 >gi|229086067|ref|ZP_04218288.1| Iron-sulfur cluster binding protein [Bacillus cereus Rock3-44] gi|228697277|gb|EEL50041.1| Iron-sulfur cluster binding protein [Bacillus cereus Rock3-44] Length = 461 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + A E E L L Sbjct: 301 KCIRCGACVNVCPVYRNIGGHAYGSVYSGPIGAVLA------PLLEGYEE-LKELPFASS 353 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L CT CP + + + + +++ Sbjct: 354 L-----CGACTDVCPVKIPLHDLLIEHRKDEVEQG 383 >gi|302540981|ref|ZP_07293323.1| iron-sulfur cluster-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302458599|gb|EFL21692.1| iron-sulfur cluster-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 404 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 14/173 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W T Sbjct: 236 NGRMCLTLPETLISVVGIEKVVPTFQDLEVFLQLLPRSSTAERMNPYTSTWTGTTDGDGP 295 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + D L C+ C+ C CP Y G A L Sbjct: 296 RAFHLVLLDNGRTDTLADTVGRQALRCIRCSACLNVCPVYERAGGHAYGSAYPGPIGAIL 355 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q E +L L C + CP ++ + + ++ +++ Sbjct: 356 TPQLRGTQSELDASLPYASSL-----CGACYEVCPVAIDIPEILVHLRERVVE 403 >gi|161524315|ref|YP_001579327.1| hypothetical protein Bmul_1140 [Burkholderia multivorans ATCC 17616] gi|189350929|ref|YP_001946557.1| hypothetical protein BMULJ_02114 [Burkholderia multivorans ATCC 17616] gi|160341744|gb|ABX14830.1| protein of unknown function DUF162 [Burkholderia multivorans ATCC 17616] gi|189334951|dbj|BAG44021.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 470 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYV------GLDRTLDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPVGIPLSHLLRTLREKQVERHL 392 >gi|217970131|ref|YP_002355365.1| iron-sulfur cluster binding protein [Thauera sp. MZ1T] gi|217507458|gb|ACK54469.1| iron-sulfur cluster binding protein [Thauera sp. MZ1T] Length = 479 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 21/96 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C CP Y Y GP + L +RD + Sbjct: 316 NCIRCGACMNHCPVYTRIGGHAYGTVYPGPIGKIVTPHMLGLETTRDLPTASSM------ 369 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 370 --------CGACGEVCPVKIPIPSLLRRLREEAVRA 397 >gi|134045477|ref|YP_001096963.1| CoB--CoM heterodisulfide reductase [Methanococcus maripaludis C5] gi|132663102|gb|ABO34748.1| CoB--CoM heterodisulfide reductase subunit C [Methanococcus maripaludis C5] Length = 192 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C C+ +CPS L L+++ IDS + L+ C Sbjct: 33 KCYQCGTCTGACPSGRITP---LRTRKLIRSALAGIDS-----------ILSSDDLWMCT 78 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + I ++ + ++ Sbjct: 79 TCYECYEKCPREVKITDIIKIVRNVAAEKG 108 >gi|240103079|ref|YP_002959388.1| Iron-sulfur binding reductase [Thermococcus gammatolerans EJ3] gi|239910633|gb|ACS33524.1| Iron-sulfur binding reductase [Thermococcus gammatolerans EJ3] Length = 378 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 7/95 (7%) Query: 166 GLYECVMC-ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L +C +C C +CP PA + + + R E NL++ L Sbjct: 36 DLTKCALCPNMCRHACPVSIVEGRETTSPAGKARIALMIREGRLEL------NLDNLEPL 89 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C CT CP + A I +K + R + Sbjct: 90 YTCLGCDLCTLYCPFEFSVADLIRPVKEEAVSRGV 124 >gi|229142088|ref|ZP_04270613.1| hypothetical protein bcere0013_51740 [Bacillus cereus BDRD-ST26] gi|228641377|gb|EEK97683.1| hypothetical protein bcere0013_51740 [Bacillus cereus BDRD-ST26] Length = 673 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDIITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|206975815|ref|ZP_03236726.1| ferredoxin, 4Fe-4S [Bacillus cereus H3081.97] gi|217962834|ref|YP_002341412.1| ferredoxin, 4Fe-4S [Bacillus cereus AH187] gi|222098817|ref|YP_002532875.1| ferredoxin, 4fe-4S [Bacillus cereus Q1] gi|206745909|gb|EDZ57305.1| ferredoxin, 4Fe-4S [Bacillus cereus H3081.97] gi|217067567|gb|ACJ81817.1| ferredoxin, 4Fe-4S [Bacillus cereus AH187] gi|221242876|gb|ACM15586.1| ferredoxin, 4Fe-4S [Bacillus cereus Q1] Length = 703 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDIITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|154492497|ref|ZP_02032123.1| hypothetical protein PARMER_02131 [Parabacteroides merdae ATCC 43184] gi|154087722|gb|EDN86767.1| hypothetical protein PARMER_02131 [Parabacteroides merdae ATCC 43184] Length = 455 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + Y P + L D ++ + Sbjct: 302 NCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDP-----------VKYSDNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++C+ CP ++ + I + + L Sbjct: 351 ACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|224438240|ref|ZP_03659173.1| hypothetical protein HcinC1_09676 [Helicobacter cinaedi CCUG 18818] gi|313144683|ref|ZP_07806876.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129714|gb|EFR47331.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 477 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 17/101 (16%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C C CP Y Y GP + + Sbjct: 303 HFYKSLSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVI------------SPQLFGM 350 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C++ CP + A+ I ++ + + Sbjct: 351 KNYGHMVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQG 391 >gi|297204214|ref|ZP_06921611.1| iron-sulfur cluster-binding protein [Streptomyces sviceus ATCC 29083] gi|197714095|gb|EDY58129.1| iron-sulfur cluster-binding protein [Streptomyces sviceus ATCC 29083] Length = 492 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKIVPSWQDLEVFLQTLPRSSTAERMNPYTSTWTGTTDEDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 QNFHLVLLDNGRSDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ +++ Sbjct: 351 ---LSPQLRGTASE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERIVE 399 >gi|152994114|ref|YP_001338949.1| D-lactate dehydrogenase (cytochrome) [Marinomonas sp. MWYL1] gi|150835038|gb|ABR69014.1| D-lactate dehydrogenase (cytochrome) [Marinomonas sp. MWYL1] Length = 959 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----SRDEFQGERLDNLE 219 D + C+ C C +SCPS L P + +R + D + L Sbjct: 547 NDKVDTCIECGFCESSCPS----KSITLTPRQRIVIWREIQRLTAMGTDPLRLAELKKDY 602 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D + C C+ CP G+N +++ Sbjct: 603 DYQGVDTCAGCGLCSMQCPVGINTGDLTRELRHD 636 >gi|197285788|ref|YP_002151660.1| iron-sulphur protein protein [Proteus mirabilis HI4320] gi|227356315|ref|ZP_03840703.1| iron-sulfur electron transport protein [Proteus mirabilis ATCC 29906] gi|194683275|emb|CAR43982.1| putative iron-sulphur protein protein [Proteus mirabilis HI4320] gi|227163425|gb|EEI48346.1| iron-sulfur electron transport protein [Proteus mirabilis ATCC 29906] Length = 473 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 19/97 (19%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP+Y Y GP + + L +D Sbjct: 311 RCIRCGACLNTCPAYRNIGGHAYGSIYPGPIGAVISPL-------------LGGYKDFHD 357 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C C CP + A+ I K + ++ + + Sbjct: 358 LPYACSLCNACNVVCPVKIPLAQLILKHRRVMAESGL 394 >gi|257075625|ref|ZP_05569986.1| oxidoreductase [Ferroplasma acidarmanus fer1] Length = 401 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C + CP+ + + A D E + LE Y C Sbjct: 12 DKCISCGFCESVCPTLEPDGYNSVFGARGRVILA------DFALKESSEGLELGNSFYSC 65 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C CP G+N A ++++ L+ Sbjct: 66 LDCYACVNVCPAGVN-AGVVSELMRELV 92 >gi|325523663|gb|EGD01935.1| iron-sulfur cluster binding protein [Burkholderia sp. TJI49] Length = 470 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ ++ + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSQLLRTLREKQVERHL 392 >gi|330835410|ref|YP_004410138.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567549|gb|AEB95654.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 582 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 16/118 (13%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + + SI+ + +P L+ + D + C++C C CP D+ Sbjct: 215 MFIRKDSIKFVALSNTPLSFPYSLEPYSDSNSKELFSGCILCGKCVYVCPHVEQRDDKNY 274 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 P + + D CH C CP LN + + Sbjct: 275 SPLGFFISLALNNQT-DYA---------------NCHFCGKCENVCPVSLNIVDNLKQ 316 >gi|218261641|ref|ZP_03476376.1| hypothetical protein PRABACTJOHN_02044 [Parabacteroides johnsonii DSM 18315] gi|218223893|gb|EEC96543.1| hypothetical protein PRABACTJOHN_02044 [Parabacteroides johnsonii DSM 18315] Length = 182 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 14/98 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLD 216 R C+ C C +CP Y + Y P + L D Sbjct: 20 ARPDHIRTLNCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDP---------- 69 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ + C ++C+ CP ++ + I + + L Sbjct: 70 -VKYSDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDL 106 >gi|52424806|ref|YP_087943.1| hypothetical protein MS0751 [Mannheimia succiniciproducens MBEL55E] gi|52306858|gb|AAU37358.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 470 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 58/223 (26%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKN---KIDPTLTLRRSCREGICGSCGMNIDGTNTLA---CVKDMKD 106 + M L I+ + D ++ C + +G LA + Sbjct: 179 ETPEDMTLFVRKKIRQDFLEADIGISGCNFAVAETGSVCLVTNEGNLRLATTLPKTHIAV 238 Query: 107 IKGA----------IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + + L +V L + E + + Sbjct: 239 MGMERLAPTFQEVDVLITMLARSAVGAKLTGYNTWLTGPRLEGETDGPEDFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + E D Sbjct: 299 SDILASEFKEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYEEFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + A+ I K + ++ + + Sbjct: 358 LP------YACSLCTACNSVCPVRIPLAQLINKHREKMVAQNL 394 >gi|294634430|ref|ZP_06712966.1| iron-sulfur cluster-binding protein [Edwardsiella tarda ATCC 23685] gi|291092140|gb|EFE24701.1| iron-sulfur cluster-binding protein [Edwardsiella tarda ATCC 23685] Length = 473 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + D Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYAAFKDLP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + ++ I + + +++ + Sbjct: 364 LCTACDSVCPVKIPLSQLILRHRRTMVEAGL 394 >gi|298529027|ref|ZP_07016430.1| heterodisulfide reductase subunit C [Desulfonatronospira thiodismutans ASO3-1] gi|298510463|gb|EFI34366.1| heterodisulfide reductase subunit C [Desulfonatronospira thiodismutans ASO3-1] Length = 171 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 GL CV C CS CP + P + + ++D + L+ + + Sbjct: 25 HGLLRCVQCGACSAVCP-----GVKAGFPVLCRMLIKKILDGQ-------LEEIIEDSSS 72 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C CT+ CP+G+ P + + + Sbjct: 73 WGCQACNRCTEVCPQGVRPQEVVFAFRRY 101 >gi|108805779|ref|YP_645716.1| Iron-sulfur cluster binding protein [Rubrobacter xylanophilus DSM 9941] gi|108767022|gb|ABG05904.1| Iron-sulfur cluster binding protein [Rubrobacter xylanophilus DSM 9941] Length = 489 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 43/161 (26%), Gaps = 17/161 (10%) Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + + V L + L V S + E + +S + Sbjct: 266 PRFEDLEVFVQLLARNGTGQKLTVYTSFITGPRQEGELDGPEEFHLILMDNGRSKLLGTE 325 Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + E D Sbjct: 326 FEEALYCIRCGSCLNVCPVYRQTGGHAYGSTYSGPIGAVIT------PLLKGDREAKDLP 379 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C ++CP G+ + K++ ++ + Sbjct: 380 HAS------SLCGACWETCPVGIPLHDLLLKLRNRQVEEGL 414 >gi|307566133|ref|ZP_07628591.1| putative iron-sulfur cluster-binding protein [Prevotella amnii CRIS 21A-A] gi|307345321|gb|EFN90700.1| putative iron-sulfur cluster-binding protein [Prevotella amnii CRIS 21A-A] Length = 466 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 31/188 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVY-PLPHMS---VIKDLVVD---------M 129 G C + + N K A+ + +P+ V L+ Sbjct: 208 AATGDCVVCTNEGNADMSTSLPKLHIVAMGIEKIIPNYDALAVFHRLLARSGTGQPSTAF 267 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW---N 186 + + + R + +L+ E +C+ C C +CP Y Sbjct: 268 TSHFRKARPDGEMHVILVDNGRSNMLRDKE----HWNSLKCIRCGACMNTCPVYRRSTGY 323 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 S Y P + L D + + C ++C CP ++P Sbjct: 324 SYSYFIPGPIGVNLGMLHDPH-----------KYSGNVSACSLCLSCDHVCPAKVDPGSQ 372 Query: 247 IAKIKMML 254 I + L Sbjct: 373 IYDWRQRL 380 >gi|83592746|ref|YP_426498.1| 4Fe-4S ferredoxin [Rhodospirillum rubrum ATCC 11170] gi|83575660|gb|ABC22211.1| 4Fe-4S ferredoxin [Rhodospirillum rubrum ATCC 11170] Length = 960 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 14/94 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE-----FQGERLDNLEDP 221 + +C+ C C CPS + L P + A+R + R E L +L D Sbjct: 544 IDKCIECGFCEPLCPSLFLT----LSPRQRITAWREIA--RLESAGASADKAALRDLYDY 597 Query: 222 FRLYRCHTIMNCTQSCPKGLN---PAKAIAKIKM 252 + C C CP G+N I + Sbjct: 598 QGVDTCAACGLCGTVCPVGINTGALTTQIRGTRR 631 >gi|134299637|ref|YP_001113133.1| hypothetical protein Dred_1783 [Desulfotomaculum reducens MI-1] gi|134052337|gb|ABO50308.1| tungsten-dependent benzoyl-CoA reductase-related protein bamD [Desulfotomaculum reducens MI-1] Length = 386 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 11/82 (13%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP L + + R L+ E LY C T Sbjct: 26 CMQCGTCAGTCP------WGRLEEKSPFNIRKMIYQGRMG-----LEGYETDDILYACTT 74 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 +C CP+G+ + ++ Sbjct: 75 CGHCVTRCPRGVKITDVVRAMR 96 >gi|126348175|emb|CAJ89896.1| putative iron-sulfur protein [Streptomyces ambofaciens ATCC 23877] Length = 474 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 46/180 (25%), Gaps = 24/180 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKVIPTWRDLEVFLQLLPRSSTAERMNPYTTMWTGTTDGDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 RAFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R D Y C CP ++ + + ++ + D+ Sbjct: 351 ---LSPQLRGTASA------IDASLPYASSLCGACYDVCPVAIDIPEVLVHLREKVADQG 401 >gi|119945154|ref|YP_942834.1| FAD linked oxidase domain-containing protein [Psychromonas ingrahamii 37] gi|119863758|gb|ABM03235.1| FAD linked oxidase domain protein [Psychromonas ingrahamii 37] Length = 943 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 9/117 (7%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I ++ P L + D + C+ C C CPS + L P + Sbjct: 514 ILNPGVIINDDPHSHLKNLKPMPKADDLIDRCIECGFCEPVCPSRTLS----LSPRQRIV 569 Query: 199 AYRWLIDSRDEFQG----ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 YR + R+ E + + + C C + CP G+N + K++ Sbjct: 570 LYR-ELQRREAAGETDNLEEFRKVFEYQGVDTCAATGLCAERCPVGINTGDLVKKLR 625 >gi|225387474|ref|ZP_03757238.1| hypothetical protein CLOSTASPAR_01227 [Clostridium asparagiforme DSM 15981] gi|225046404|gb|EEG56650.1| hypothetical protein CLOSTASPAR_01227 [Clostridium asparagiforme DSM 15981] Length = 130 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C CS SCPSY + P + Q ++ L +++C Sbjct: 22 KCMKCGRCSASCPSYDAMD---IRPHQFVSY----------VQNGDVEPLLHSKSIWKCL 68 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP+ + PAK I +++M++ ++ Sbjct: 69 SCFACVERCPRDVKPAKLIEAVRLMVIRQQ 98 >gi|228994064|ref|ZP_04153965.1| hypothetical protein bpmyx0001_47870 [Bacillus pseudomycoides DSM 12442] gi|228765712|gb|EEM14365.1| hypothetical protein bpmyx0001_47870 [Bacillus pseudomycoides DSM 12442] Length = 673 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 38/128 (29%) Query: 166 GLYECVMCACCSTSCPSY-------------------------------WWNSDRYLGPA 194 LY CV C C+ CP+ W + + Sbjct: 243 DLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSRAPWVPAVAFNNTQ 302 Query: 195 ILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 A + E L ++ ++ C T NC CP + Sbjct: 303 GNQLAMMAAGQGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKV 362 Query: 248 AKIKMMLL 255 ++ L+ Sbjct: 363 IDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L D+ Sbjct: 244 LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229000133|ref|ZP_04159703.1| hypothetical protein bmyco0003_46860 [Bacillus mycoides Rock3-17] gi|229007654|ref|ZP_04165247.1| hypothetical protein bmyco0002_45330 [Bacillus mycoides Rock1-4] gi|228753605|gb|EEM03050.1| hypothetical protein bmyco0002_45330 [Bacillus mycoides Rock1-4] gi|228759670|gb|EEM08646.1| hypothetical protein bmyco0003_46860 [Bacillus mycoides Rock3-17] Length = 673 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 38/128 (29%) Query: 166 GLYECVMCACCSTSCPSY-------------------------------WWNSDRYLGPA 194 LY CV C C+ CP+ W + + Sbjct: 243 DLYACVECGRCTNMCPATGTGKILSPMDLILKLRDHLTDKGAAVTSRAPWVPAVAFNNTQ 302 Query: 195 ILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 A + E L ++ ++ C T NC CP + Sbjct: 303 GNQLAMMAAGQGQQESAATALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKV 362 Query: 248 AKIKMMLL 255 ++ L+ Sbjct: 363 IDLRRYLV 370 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L D+ Sbjct: 244 LYACVECGRCTNMCPATGTGKILSPMDLILKLRDHLTDKG 283 >gi|169836631|ref|ZP_02869819.1| fumarate reductase iron-sulfur subunit [candidate division TM7 single-cell isolate TM7a] Length = 71 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRC 227 C+ C C +C + D ++G L + R+ ID+ D+ E + + D ++ C Sbjct: 1 RCIECGICVAACGTAIMRPD-FIGAVGLNRVARFKIDALDKRTDEDFYELIGDDDGVFGC 59 Query: 228 HTIMNCTQSCP 238 ++M C +CP Sbjct: 60 MSLMGCEDNCP 70 >gi|288962981|ref|YP_003453275.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288915247|dbj|BAI76731.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 474 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 9/89 (10%) Query: 169 ECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP Y Y P + + + + C Sbjct: 311 RCIRCGACMNHCPVYTKVGGHAYEAPYPGPIGKILVPQIEGLAKRGAMPHA--------C 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + + + ++++ + Sbjct: 363 TMCNACVEICPVKIPIVEIMGRLRVEAVR 391 >gi|317494202|ref|ZP_07952618.1| glycerol-3-phosphate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917975|gb|EFV39318.1| glycerol-3-phosphate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 399 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C+T CP N + Y GP D + D L Sbjct: 4 HADNSFENCIKCTVCTTYCPVAKVNPN-YPGPKQA---------GPDGERLRLKDPLLYD 53 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + K K Sbjct: 54 DALKYCTNCKRCEVACPSDVKIGDIIQRAKANYSQHK 90 >gi|254247780|ref|ZP_04941101.1| hypothetical protein BCPG_02588 [Burkholderia cenocepacia PC184] gi|124872556|gb|EAY64272.1| hypothetical protein BCPG_02588 [Burkholderia cenocepacia PC184] Length = 470 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ D LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV--GLDRA----LDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|21957095|gb|AAM83995.1|AE013641_4 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Yersinia pestis KIM 10] Length = 456 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 11/137 (8%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECVMCA 174 + + V + + I L P ++ + + R + + C+ C Sbjct: 2 WRGCFIDQCCVCRRTDYQRDGGDIMTGLPKHDASPEQDGMMVGDSRLTRDNSFESCIKCT 61 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C+T CP N Y GP D + D L C C Sbjct: 62 VCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDDALKYCTNCKRCE 111 Query: 235 QSCPKGLNPAKAIAKIK 251 +CP + I + K Sbjct: 112 VACPSDVKIGDIIQRAK 128 >gi|303287729|ref|XP_003063153.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454985|gb|EEH52289.1| predicted protein [Micromonas pusilla CCMP1545] Length = 935 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 12/130 (9%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + +S + C+ C C ++CPS D L P Sbjct: 488 EYVLNPGVILSRDKDMHQKFLKPKPVADPIVDMCMECGFCESNCPSR----DLSLTPRQR 543 Query: 197 LQAYRWL-----IDSRDEFQGERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKAIA 248 + YR + + +RD Q RLD D F T C CP G+N + + Sbjct: 544 ITVYREISRLQDMPTRDNAQQARLDEFLDKFTYEGDATCAADGMCQVKCPVGINTGELVK 603 Query: 249 KIKMMLLDRK 258 I+ L ++ Sbjct: 604 SIRERDLKKQ 613 >gi|126664349|ref|ZP_01735333.1| D-lactate dehydrogenase, putative [Marinobacter sp. ELB17] gi|126630675|gb|EBA01289.1| D-lactate dehydrogenase, putative [Marinobacter sp. ELB17] Length = 938 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I +S P L + + +C+ C C CPS + L P Sbjct: 507 QGILNPDVVLSEDPDIHLKNLKPMPAANEIIDKCIECGFCEPVCPSNGLS----LSPRQR 562 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R + + R L+ + C C Q CP G+N + +++ Sbjct: 563 IVIWRDIQAKKRAGVDTRELEEAYQYQGIDTCAATGLCAQRCPVGINTGDLVRELR 618 >gi|157368451|ref|YP_001476440.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Serratia proteamaculans 568] gi|157320215|gb|ABV39312.1| protein of unknown function DUF224 cysteine-rich region domain protein [Serratia proteamaculans 568] Length = 399 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 28/97 (28%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 K + C+ C C+T CP N Y GP D + D Sbjct: 4 HKDNSFENCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYD 53 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + K Sbjct: 54 EALKYCTNCKRCEVACPSDVKIGDIIQRARADFAQSK 90 >gi|45268995|gb|AAS55910.1| succinate dehydrogenase iron-protein subunit [Sus scrofa] Length = 43 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 26/37 (70%), Positives = 30/37 (81%) Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 F LYRCHTIMNCT +CPKGL+P KAIA+IK M+ K Sbjct: 1 FSLYRCHTIMNCTGTCPKGLDPGKAIAEIKKMMATYK 37 >gi|77917879|ref|YP_355694.1| NADH:ubiquinone oxidoreductase subunit RnfC [Pelobacter carbinolicus DSM 2380] gi|77543962|gb|ABA87524.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Pelobacter carbinolicus DSM 2380] Length = 437 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C +CP + P + R RDE L + F C Sbjct: 364 CVRCGRCVAACPMHLM-------PTFIADYAR-----RDEL------ALAERFAARNCIE 405 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP G+ ++I K +L R+ Sbjct: 406 CGSCSFVCPAGIPLVQSIRYAKGAILARR 434 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 10/26 (38%), Gaps = 1/26 (3%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 + C C +CP L P IA Sbjct: 361 IGSCVRCGRCVAACPMHLMPT-FIAD 385 >gi|309791882|ref|ZP_07686365.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Oscillochloris trichoides DG6] gi|308226054|gb|EFO79799.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Oscillochloris trichoides DG6] Length = 401 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 D L +C+ C C T+CP + + QA R+ D Sbjct: 3 HLEDSLDQCIKCNVCMTACPVAAVSPHFPGPKVVGPQAQRF----------RHADQPVPD 52 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + CP G+ A+ A+ + L+ + Sbjct: 53 ASVDYCSGCRVCNEVCPAGVRIAELNARARAQLVAAQ 89 >gi|296136728|ref|YP_003643970.1| protein of unknown function DUF162 [Thiomonas intermedia K12] gi|295796850|gb|ADG31640.1| protein of unknown function DUF162 [Thiomonas intermedia K12] Length = 473 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 21/101 (20%) Query: 166 GLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + +Y+ L ++D Q Sbjct: 307 EMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYQGLESTQDLPQAA----- 361 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + K++ +R++ Sbjct: 362 ---------TLCGQCEVVCPMKIPLPDLLRKMREQQFEREM 393 >gi|258406083|ref|YP_003198825.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfohalobium retbaense DSM 5692] gi|257798310|gb|ACV69247.1| quinone-interacting membrane-bound oxidoreductase, subunit C [Desulfohalobium retbaense DSM 5692] Length = 407 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP D+ ++ A L D L D ++ Sbjct: 25 LKKCYQCATCSVVCPL--SPIDKPYPRKEMVWAQWGLRD----------KLLNDID-IWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH C+ CP+G P +A ++ M + Sbjct: 72 CHNCGQCSDLCPRGAKPGDLLAGLRNMAYRK 102 >gi|163782138|ref|ZP_02177137.1| heterodisulfide reductase subunit C [Hydrogenivirga sp. 128-5-R1-1] gi|159882670|gb|EDP76175.1| heterodisulfide reductase subunit C [Hydrogenivirga sp. 128-5-R1-1] Length = 253 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C+ C+ SCP + + +RY + A LID +R D + +RC Sbjct: 62 QCYQCSYCTASCPVHNYWDERYNPRHFIHLARLGLIDEL----QKRADVM------WRCV 111 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + CT CPKG+ + + I ++ + + Sbjct: 112 SCHKCTHRCPKGVLVEEVLKAILRVMAKKGV 142 >gi|49480424|ref|YP_039338.1| ferredoxin, 4Fe-4S [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331980|gb|AAT62626.1| ferredoxin, 4Fe-4S [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 703 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 38/135 (28%), Gaps = 42/135 (31%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------------- 201 + ++ LY CV C C+ CP+ + + L P L+ R Sbjct: 268 QNQLIDLYACVECGRCTNMCPA--TGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPV 325 Query: 202 ------------WLIDSRDEFQGERLDNLED---------PFRLYRCHTIMNCTQSCPKG 240 + + + + D ++ C T NC CP Sbjct: 326 VAFNNTQGNQLAMMAAGKGQQESAAATIAYDPSLIGDVITEEEIWACTTCRNCEDQCPVM 385 Query: 241 LNPAKAIAKIKMMLL 255 I ++ L+ Sbjct: 386 NEHVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|51245660|ref|YP_065544.1| glycolate oxidase, iron-sulfur subunit [Desulfotalea psychrophila LSv54] gi|50876697|emb|CAG36537.1| related to glycolate oxidase, iron-sulfur subunit [Desulfotalea psychrophila LSv54] Length = 427 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 8/86 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 EC C C+ CP Y + + + Q + + D + D +C Sbjct: 13 ECARCGACTVVCPVYRASGGKEFYSSRGRQHLQKI--GEDASGADVKDI------FSKCL 64 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C+Q CP+G++ + +++ + Sbjct: 65 LCGACSQVCPRGIDTLAHVRQVRSEI 90 >gi|297619322|ref|YP_003707427.1| CoB/CoM heterodisulfide reductase subunit C [Methanococcus voltae A3] gi|297378299|gb|ADI36454.1| CoB/CoM heterodisulfide reductase, subunit C [Methanococcus voltae A3] Length = 185 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 14/92 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ SCPS Y ++ QA + D + D +++ Sbjct: 32 FKACYQCGTCTGSCPSGR--RTAYRTRKVIRQALLGIED------------VLDSDDIWK 77 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + I ++ + + Sbjct: 78 CVTCYTCFERCPRDVKVTEVIKALRNLAAQKG 109 >gi|134296311|ref|YP_001120046.1| hypothetical protein Bcep1808_2209 [Burkholderia vietnamiensis G4] gi|134139468|gb|ABO55211.1| protein of unknown function DUF162 [Burkholderia vietnamiensis G4] Length = 470 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GIDRALDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|307131352|ref|YP_003883368.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Dickeya dadantii 3937] gi|306528881|gb|ADM98811.1| Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Dickeya dadantii 3937] Length = 473 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 61/226 (26%), Gaps = 29/226 (12%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIRQDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFEEVDVLITMLARSAVGARLTGYNTWLTGPRETGNVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGE 213 S + + C+ C C +CP+Y G P + L+ D+F+ Sbjct: 299 STVLGSQFQEILRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYDDFKDL 358 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I K + ++ + + Sbjct: 359 ----------PYACSLCTACDSVCPVKIPLSKLILKHRRVMAEGGL 394 >gi|262275853|ref|ZP_06053662.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Grimontia hollisae CIP 101886] gi|262219661|gb|EEY70977.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Grimontia hollisae CIP 101886] Length = 405 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 10/98 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + Q+ +C+ C C+ CP N Y GP D + Sbjct: 1 MNTAQHSQRETRFEQCLKCTVCTVYCPVAKANP-LYPGPKQC---------GPDGERLRL 50 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D L C C +CP G+N IA + Sbjct: 51 KDATFYDDALKMCTNCKRCETACPSGVNIGDIIALARK 88 >gi|183598046|ref|ZP_02959539.1| hypothetical protein PROSTU_01402 [Providencia stuartii ATCC 25827] gi|188022825|gb|EDU60865.1| hypothetical protein PROSTU_01402 [Providencia stuartii ATCC 25827] Length = 397 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 10/92 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+T CP N Y GP D + D + L Sbjct: 8 FESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPMLYDEALKY 57 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + IA+ + +K Sbjct: 58 CTNCKRCEVACPSDVKIGDIIARARNTYSQQK 89 >gi|332296251|ref|YP_004438174.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179354|gb|AEE15043.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 435 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + C+ C C ++CP Y+ +S L L+ + E +++ + + Sbjct: 15 YYEEQIIRCMKCGMCQSTCPVYYEDSLETGCARGKLALSEALLHGKLEP-NHKIEMIFNK 73 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C Q+CP GL+P K A + ++ R Sbjct: 74 -----CLLCHACAQACPVGLSPDKVFAAARAEMVKR 104 >gi|32477294|ref|NP_870288.1| glycolate oxidase, iron-sulfur subunit [Rhodopirellula baltica SH 1] gi|32447845|emb|CAD77363.1| glycolate oxidase, iron-sulfur subunit [Rhodopirellula baltica SH 1] Length = 444 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 7/95 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + C+ C C ++CP+Y P + + +++ Sbjct: 20 MAEAVSTCIRCGFCLSACPTYDVLQRESDSPRGRIILMKEVLEGAMPADKA-------AP 72 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C +CP G++ ++ + ++ +R Sbjct: 73 HLDACLGCLACEPACPSGVSYRHLLSPYRSLVRER 107 >gi|116750949|ref|YP_847636.1| DNA binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700013|gb|ABK19201.1| DNA binding domain, excisionase family [Syntrophobacter fumaroxidans MPOB] Length = 308 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 25/93 (26%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+++CP ID D + R+ L L Sbjct: 97 HYGDACLTCGSCASACPISG-------------------IDGFDPRKAVRMAVLGLEEEL 137 Query: 225 ------YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++C C ++CP + I +++ Sbjct: 138 IASQWPWKCTLCGKCEEACPMNVEIVGLIQRVR 170 >gi|311029141|ref|ZP_07707231.1| (S)-2-hydroxy-acid oxidase [Bacillus sp. m3-13] Length = 446 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 7/115 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL 203 S K + + + R D L C+ C C SCP+Y + P + + + Sbjct: 1 MTSVKEKQAIQDEFKTRMDEDELLNCMRCGFCLPSCPTYVESGFKESHSPRGRIALMKAV 60 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D E + L C C CP G+ + + + ++ K Sbjct: 61 VDGVIEPDEDV------ERTLDLCLGCRACEPVCPSGVKYGHLLEEARDIINQNK 109 >gi|70606173|ref|YP_255043.1| metabolism heterodisulfide reductase C [Sulfolobus acidocaldarius DSM 639] gi|68566821|gb|AAY79750.1| metabolism heterodisulfide reductase C [Sulfolobus acidocaldarius DSM 639] Length = 280 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRS--IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP D+ ++ ++ + + D + + L C+ Sbjct: 9 PLPDDPRYLDMSYEVQGAVAEEERNLMSNLKPDEREAAIRFWEAVKSDFRFNEYLRGCLN 68 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + DS D+ +++ C Sbjct: 69 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDSVDKIWE------FTNKKVWACVQCYT 117 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 118 CSMRCPFNNEIAGLIMLLREYAVK 141 >gi|332289454|ref|YP_004420306.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Gallibacterium anatis UMN179] gi|330432350|gb|AEC17409.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Gallibacterium anatis UMN179] Length = 420 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 10/96 (10%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 Q+H+ + C+ C C+ CP N Y GP D + Sbjct: 12 QTHQQPYQDSSFESCIKCTACTAVCPVSRNNP-FYPGPKQA---------GPDGERLRLK 61 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L L C C +CP G+ I + + Sbjct: 62 NPLLYDEALKYCTNCKRCEIACPSGVKIGDIIVRAR 97 >gi|312891897|ref|ZP_07751401.1| protein of unknown function DUF162 [Mucilaginibacter paludis DSM 18603] gi|311295630|gb|EFQ72795.1| protein of unknown function DUF162 [Mucilaginibacter paludis DSM 18603] Length = 468 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 12/133 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + S +++ R + + L E R + +C+ C C +CP Y Sbjct: 275 ITTYSSHFAKPREGQEMHIIIVDNGRTVQLGREEFRNSL----KCIRCGACMNTCPVYRR 330 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + AI L + D + L + +C+ CP ++ Sbjct: 331 SGGHSYHNAISGPIGAILAPNLDMKEYADLP--------FASTLCGSCSNVCPVKIDIHD 382 Query: 246 AIAKIKMMLLDRK 258 + K + +++ Sbjct: 383 QLYKWRQVIVKNG 395 >gi|255690915|ref|ZP_05414590.1| iron-sulfur cluster binding protein [Bacteroides finegoldii DSM 17565] gi|260623557|gb|EEX46428.1| iron-sulfur cluster binding protein [Bacteroides finegoldii DSM 17565] Length = 461 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSALLSKTD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + D + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMAHDP-----EKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|327541190|gb|EGF27734.1| protein of unknown function cysteine-rich region domain protein [Rhodopirellula baltica WH47] Length = 444 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 7/95 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + C+ C C ++CP+Y P + + +++ Sbjct: 20 MAEAVSTCIRCGFCLSACPTYDVLQRESDSPRGRIILMKEVLEGAMPADKA-------AP 72 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C +CP G++ ++ + ++ +R Sbjct: 73 HLDACLGCLACEPACPSGVSYRHLLSPYRSLVRER 107 >gi|331681148|ref|ZP_08381785.1| iron-sulfur cluster-binding protein [Escherichia coli H299] gi|331081369|gb|EGI52530.1| iron-sulfur cluster-binding protein [Escherichia coli H299] Length = 471 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 55/223 (24%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIREKIREDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTIPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + Sbjct: 239 MGMERIAPTFQEVDVLITMLARSAVGARLTGYNTWLTGPREEGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLGSEFSEVLRCIRCGACINTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYEDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + AK I K + + + +I Sbjct: 358 LP------YACSLCTACNSVCPVKIPLAKLIQKHRQAMAESEI 394 >gi|295401446|ref|ZP_06811416.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976496|gb|EFG52104.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 433 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 7/88 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 Y+CV C C +CP+Y P + R + LD L P L Sbjct: 16 AYDCVQCGYCLPACPTYLTMKTETQSPRGRIHLVRMAAEGCIT-----LDELSGP--LDL 68 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C Q CP + K + K + Sbjct: 69 CLGCRACEQVCPSNVQYGKMLELAKTAI 96 >gi|260913569|ref|ZP_05920046.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Pasteurella dagmatis ATCC 43325] gi|260632345|gb|EEX50519.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Pasteurella dagmatis ATCC 43325] Length = 423 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 12/112 (10%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + + C+ C C+ CP N Y GP + Sbjct: 8 ESAKQNMAAPMTHHHVDESFESCIKCTACTAVCPVSRQNP-FYPGPK----------QAG 56 Query: 208 DEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + RL + E L C C +CP + I + + ++R+ Sbjct: 57 PDGERLRLKSAELYDEALKYCTNCKRCEVACPSDVKIGDLIVRARNNHIERQ 108 >gi|228924081|ref|ZP_04087357.1| hypothetical protein bthur0011_50540 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835571|gb|EEM80936.1| hypothetical protein bthur0011_50540 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|228955593|ref|ZP_04117594.1| hypothetical protein bthur0006_49460 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804096|gb|EEM50714.1| hypothetical protein bthur0006_49460 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|228961609|ref|ZP_04123218.1| hypothetical protein bthur0005_50510 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798091|gb|EEM45095.1| hypothetical protein bthur0005_50510 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229087838|ref|ZP_04219952.1| hypothetical protein bcere0022_43940 [Bacillus cereus Rock3-44] gi|228695474|gb|EEL48345.1| hypothetical protein bcere0022_43940 [Bacillus cereus Rock3-44] Length = 671 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 34/131 (25%), Gaps = 36/131 (27%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W + Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKILSPMDLIVKLRDHLTDKGAAVTSKVPWVPAVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-----NLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + A + D ++ ++ C T NC CP Sbjct: 298 FNNTKGNQLALASGQGQHESAAALAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHV 357 Query: 245 KAIAKIKMMLL 255 I ++ L+ Sbjct: 358 DKIIDLRRYLV 368 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKILSPMDLIVKLRDHLTDKG 283 >gi|229130594|ref|ZP_04259550.1| hypothetical protein bcere0015_50270 [Bacillus cereus BDRD-Cer4] gi|228652933|gb|EEL08815.1| hypothetical protein bcere0015_50270 [Bacillus cereus BDRD-Cer4] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKLLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKLLSPMDLILKLRDHLTDKG 283 >gi|229147885|ref|ZP_04276226.1| hypothetical protein bcere0012_50080 [Bacillus cereus BDRD-ST24] gi|228635535|gb|EEK92024.1| hypothetical protein bcere0012_50080 [Bacillus cereus BDRD-ST24] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229051016|ref|ZP_04194564.1| hypothetical protein bcere0027_49690 [Bacillus cereus AH676] gi|229112759|ref|ZP_04242291.1| hypothetical protein bcere0018_49970 [Bacillus cereus Rock1-15] gi|229153508|ref|ZP_04281686.1| hypothetical protein bcere0011_50380 [Bacillus cereus m1550] gi|229181594|ref|ZP_04308919.1| hypothetical protein bcere0005_49330 [Bacillus cereus 172560W] gi|228601790|gb|EEK59286.1| hypothetical protein bcere0005_49330 [Bacillus cereus 172560W] gi|228630112|gb|EEK86763.1| hypothetical protein bcere0011_50380 [Bacillus cereus m1550] gi|228670593|gb|EEL25905.1| hypothetical protein bcere0018_49970 [Bacillus cereus Rock1-15] gi|228722325|gb|EEL73722.1| hypothetical protein bcere0027_49690 [Bacillus cereus AH676] Length = 673 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 238 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 297 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 298 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 357 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 358 HVDKIIDLRRYLV 370 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 237 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 283 >gi|229193598|ref|ZP_04320542.1| hypothetical protein bcere0002_52420 [Bacillus cereus ATCC 10876] gi|228589903|gb|EEK47778.1| hypothetical protein bcere0002_52420 [Bacillus cereus ATCC 10876] Length = 629 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 314 HVDKIIDLRRYLV 326 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|206970011|ref|ZP_03230964.1| ferredoxin, 4Fe-4S [Bacillus cereus AH1134] gi|218230821|ref|YP_002370122.1| ferredoxin, 4Fe-4S [Bacillus cereus B4264] gi|229072812|ref|ZP_04206011.1| hypothetical protein bcere0025_49720 [Bacillus cereus F65185] gi|229082559|ref|ZP_04215022.1| hypothetical protein bcere0023_51760 [Bacillus cereus Rock4-2] gi|296505769|ref|YP_003667469.1| iron-sulfur-binding reductase [Bacillus thuringiensis BMB171] gi|206734588|gb|EDZ51757.1| ferredoxin, 4Fe-4S [Bacillus cereus AH1134] gi|218158778|gb|ACK58770.1| ferredoxin, 4Fe-4S [Bacillus cereus B4264] gi|228700991|gb|EEL53514.1| hypothetical protein bcere0023_51760 [Bacillus cereus Rock4-2] gi|228710303|gb|EEL62278.1| hypothetical protein bcere0025_49720 [Bacillus cereus F65185] gi|296326821|gb|ADH09749.1| Iron-sulfur-binding reductase [Bacillus thuringiensis BMB171] Length = 703 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 313 >gi|30023376|ref|NP_835007.1| Iron-sulphur-binding reductase [Bacillus cereus ATCC 14579] gi|29898937|gb|AAP12208.1| Iron-sulphur-binding reductase [Bacillus cereus ATCC 14579] Length = 703 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 268 QNQLIDLYACVECGRCTNMCPATGTGKLLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 327 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 328 FNNTQGNQLAMMAAGKGQQESASTTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 387 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 HVDKIIDLRRYLV 400 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 267 RQNQLID---LYACVECGRCTNMCPATGTGKLLSPMDLILKLRDHLTDKG 313 >gi|312193417|ref|YP_003991083.1| hypothetical protein GY4MC1_3852 [Geobacillus sp. Y4.1MC1] gi|311217869|gb|ADP76472.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacillus sp. Y4.1MC1] Length = 433 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 7/88 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 Y+CV C C +CP+Y P + R + LD L P L Sbjct: 16 AYDCVQCGYCLPACPTYLTMKTETQSPRGRIHLVRMAAEGCIT-----LDELSGP--LDL 68 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C Q CP + K + K + Sbjct: 69 CLGCRACEQVCPSNVQYGKMLELAKTAI 96 >gi|268590811|ref|ZP_06125032.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Providencia rettgeri DSM 1131] gi|291313591|gb|EFE54044.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Providencia rettgeri DSM 1131] Length = 397 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 10/92 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+T CP N Y GP D + D + L Sbjct: 8 FESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPMLYDEALKY 57 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + IA+ + +K Sbjct: 58 CTNCKRCEVACPSDVKIGDIIARARNTYSQQK 89 >gi|288941751|ref|YP_003443991.1| hypothetical protein Alvin_2037 [Allochromatium vinosum DSM 180] gi|68272121|gb|AAY89333.1| Isp2 [Allochromatium vinosum] gi|288897123|gb|ADC62959.1| protein of unknown function DUF224 cysteine-rich region domain protein [Allochromatium vinosum DSM 180] Length = 421 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 13/115 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID------SRD 208 L++ D CV C C+ +CP Y D P + L+ R + + R Sbjct: 13 LRAEIDAPTAAFFSSCVHCGLCAQACPFYLETGDPKYTPILKLEPLRRVWENEFTLWGRI 72 Query: 209 EF-----QGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + L + L C C+ CP G + I K + ++ Sbjct: 73 KGLLGLQKKVTDEMLAEWEELVYDSCSLCGRCSVVCPVGNDLYAMIRKTREGMVQ 127 >gi|297183168|gb|ADI19309.1| uncharacterized conserved protein containing a ferredoxin-like domain-protein [uncultured delta proteobacterium HF0500_03A04] Length = 477 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 28/110 (25%), Gaps = 17/110 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDE 209 + + C+ C C CP Y Y GP + A + Sbjct: 298 RSQMYEDDLLQDTLMCIRCGACLNHCPVYARIGGHAYRSVYPGPIGKILA----PQMKGL 353 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q L + C + CP + + K++ + Sbjct: 354 QQAGHLASASS--------LCGACVEVCPVKIPITNILLKLREQKAAAGL 395 >gi|327485955|gb|AEA80361.1| Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Vibrio cholerae LMA3894-4] Length = 959 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRL 224 C+ C C CPS L P + YR L R L+ + + L Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGL 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G+N + K++ Sbjct: 600 DTCAATGLCAERCPVGINAGDLVKKLR 626 >gi|255011035|ref|ZP_05283161.1| hypothetical protein Bfra3_17982 [Bacteroides fragilis 3_1_12] gi|313148840|ref|ZP_07811033.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137607|gb|EFR54967.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 461 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 14/98 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLD 216 C+ C C +CP Y + Y P + D + D Sbjct: 293 AHPDHIKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMAHDP-----EKYYD 347 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 NL C M+C+ CP ++ A+ I K + L Sbjct: 348 NLS------ACSLCMSCSDVCPAKVDLAEQIYKWRQDL 379 >gi|71278510|ref|YP_271330.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] gi|71144250|gb|AAZ24723.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] Length = 944 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 12/95 (12%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLED 220 D + +C+ C C CPS + L P + YR + SR G+ L LE Sbjct: 536 HDIVDKCIECGFCEPVCPSKGLS----LTPRQRITTYREI--SRLTASGDNPQLLSELEK 589 Query: 221 PF---RLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 F + C C CP G+N I ++ Sbjct: 590 DFNYLGIDTCAATGLCADRCPVGINTGDLIRDLRN 624 >gi|281423519|ref|ZP_06254432.1| iron-sulfur cluster-binding protein [Prevotella oris F0302] gi|281402339|gb|EFB33170.1| iron-sulfur cluster-binding protein [Prevotella oris F0302] Length = 457 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + ++L + E +C+ C C +CP Y Sbjct: 264 TTTYTSHFRQARPGGEMHVVLVDNGRSKILGNPE----HWETLKCIRCGACMNTCPVYRR 319 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D+R + C ++C CP + Sbjct: 320 SGGYSYSYFIPGPIGVNLGMLHDARKHAGN-----------VSACSLCLSCDNVCPAEVA 368 Query: 243 PAKAIAKIKMML 254 P I + ML Sbjct: 369 PGSQIYVWRQML 380 >gi|13541423|ref|NP_111111.1| hypothetical protein TVN0592 [Thermoplasma volcanium GSS1] gi|14324807|dbj|BAB59734.1| iron-sulfur protein [Thermoplasma volcanium GSS1] Length = 381 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 26/89 (29%), Gaps = 22/89 (24%) Query: 170 CVMCACCSTSCPSYWWNSDR-------YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C SCP Y Y GP ++ Y D Sbjct: 299 CIKCGRCYFSCPIYRTLGKEWISTKSPYNGPTGVMWNYITNKDPWPAS------------ 346 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP +N + I IK Sbjct: 347 ---YCVHSGGCKEVCPMKINIPEVIKYIK 372 >gi|242398758|ref|YP_002994182.1| hypothetical protein TSIB_0772 [Thermococcus sibiricus MM 739] gi|242265151|gb|ACS89833.1| hypothetical protein TSIB_0772 [Thermococcus sibiricus MM 739] Length = 384 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 12/133 (9%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC-ACCSTSCPSYWWN 186 + + IE + D L +C +C C +CP + Sbjct: 4 KWDWLRDEIKGIELLRSA-----PLIFRFISGKFKGPDDLIKCALCPNMCRHACPISIVD 58 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 P + ++ + + E NLE+ LY C + C++ CP + A Sbjct: 59 GKETTSPTGKTRTAFFIREGKLEL------NLENLEPLYMCLSCNACSEWCPFNFSVADL 112 Query: 247 IAKIKMMLLDRKI 259 I IK + + + Sbjct: 113 IRPIKEEAIQKGV 125 >gi|315182116|gb|ADT89029.1| oxidoreductase/iron-sulfur cluster-binding protein [Vibrio furnissii NCTC 11218] Length = 947 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CPS + + R + + E L+ + + L C Sbjct: 546 RCIECGFCEPVCPSRTLTLSPRQRIVLFRELQRRIAAGENVQASE-LEQVFEYQGLDTCA 604 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 C + CP G+N + K++ Sbjct: 605 ATGLCAERCPVGINTGDLVKKLR 627 >gi|260769891|ref|ZP_05878824.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio furnissii CIP 102972] gi|260615229|gb|EEX40415.1| predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing [Vibrio furnissii CIP 102972] Length = 952 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CPS + + R + + E L+ + + L C Sbjct: 551 RCIECGFCEPVCPSRTLTLSPRQRIVLFRELQRRIAAGENVQASE-LEQVFEYQGLDTCA 609 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 C + CP G+N + K++ Sbjct: 610 ATGLCAERCPVGINTGDLVKKLR 632 >gi|253995813|ref|YP_003047877.1| hypothetical protein Mmol_0440 [Methylotenera mobilis JLW8] gi|253982492|gb|ACT47350.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylotenera mobilis JLW8] Length = 391 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 6/92 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y P +Q R + S+D +N + Sbjct: 11 EADRCVACGLCLPHCPTYRKTGSEADSPRGRIQLIRAV--SQDILP----NNARFKEHID 64 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + +C +CP ++ + + + + + Sbjct: 65 LCLSCRSCESACPNSVSYGALVDTTRALYIKK 96 >gi|206560564|ref|YP_002231329.1| putative iron-sulfur binding protein [Burkholderia cenocepacia J2315] gi|198036606|emb|CAR52503.1| putative iron-sulfur binding protein [Burkholderia cenocepacia J2315] Length = 470 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GLDRTLDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|170733483|ref|YP_001765430.1| hypothetical protein Bcenmc03_2147 [Burkholderia cenocepacia MC0-3] gi|169816725|gb|ACA91308.1| protein of unknown function DUF162 [Burkholderia cenocepacia MC0-3] Length = 470 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GLDRTLDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|107028690|ref|YP_625785.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia AU 1054] gi|116690151|ref|YP_835774.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897854|gb|ABF80812.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia cenocepacia AU 1054] gi|116648240|gb|ABK08881.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia cenocepacia HI2424] Length = 470 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + ++ LD Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYV------GLDRTLDLP 357 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP G+ + + ++ ++R + Sbjct: 358 QAA------TLCGECDSVCPAGIPLSHLLRTLREKQVERHL 392 >gi|222824446|ref|YP_002576020.1| iron-sulfur cluster binding protein [Campylobacter lari RM2100] gi|222539667|gb|ACM64768.1| putative iron-sulfur cluster binding protein [Campylobacter lari RM2100] Length = 471 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + + C+ C C CP Y Y GP + + Sbjct: 292 HNRSKMLNDEDYYEALRCIRCGACMNFCPVYDKIGGHTYQSVYPGPIGEVISPNL----- 346 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E+ L C C++ CP + A I K++ Sbjct: 347 -------FGMQENGDILTFCSLCGRCSEVCPVRIPLADLIRKLR 383 >gi|146304231|ref|YP_001191547.1| hypothetical protein Msed_1466 [Metallosphaera sedula DSM 5348] gi|145702481|gb|ABP95623.1| protein of unknown function DUF162 [Metallosphaera sedula DSM 5348] Length = 375 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 20/90 (22%) Query: 170 CVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y + Y GP + +Y D + Sbjct: 299 CIRCGRCHLHCPVYRAMDGKWGVPPYSGPMGSMWSYVVFGDPKPSLL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP +N + + KIK Sbjct: 346 --CTHSGGCKEVCPMKINIPRVLEKIKARA 373 >gi|302343545|ref|YP_003808074.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301640158|gb|ADK85480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 557 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 22/136 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 ++D V + Q + + + C C C+T Sbjct: 427 FKALRDRAVSAAQPSRQQKVVRLGQRQFGAGLDLSGRAQS--------FAGCFRCKTCTT 478 Query: 179 SCPSYW----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP ++ L P ++ A + R+E G R+ ++ C + C Sbjct: 479 VCPVVQECADVKAEIDLAPHQIMHALGLGL--REEALGARM--------IWNCLSCYRCQ 528 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+G+ + ++ Sbjct: 529 EACPQGVRVTDIMFEL 544 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 29/99 (29%), Gaps = 10/99 (10%) Query: 165 DGLYECVMCACCSTSCPSYWWNS---DRYLGPAILLQAYRWLIDSR--DEFQGERLDNLE 219 L C CA CS C + + + P+ L A + + D+ R+ Sbjct: 329 MELDACTHCAACSVRCSVAAAMAQVANPAILPSEKLHALARMAHGKGLDQHDLRRIRQ-- 386 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP +N K L Sbjct: 387 ---GADICTDCHRCTDLCPVRINLQDLWQAQKQDLERAG 422 >gi|50120849|ref|YP_050016.1| putative electron transport protein [Pectobacterium atrosepticum SCRI1043] gi|49611375|emb|CAG74822.1| putative electron transport protein [Pectobacterium atrosepticum SCRI1043] Length = 473 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 56/224 (25%), Gaps = 25/224 (11%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRKKIREDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFEEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPQEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + C+ C C +CP+Y G + L Sbjct: 299 SQILGSAFRDILRCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVI--------SPLLG 350 Query: 217 NLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D L Y C C CP + + I K + ++ + I Sbjct: 351 GYQDFKELPYACSLCTACDTVCPVHIPLSSLILKHRRVMAESGI 394 >gi|15921958|ref|NP_377627.1| hypothetical protein ST1655 [Sulfolobus tokodaii str. 7] gi|15622746|dbj|BAB66736.1| 383aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 383 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 20/89 (22%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + +Y D + Sbjct: 302 CIRCGRCHLHCPIYRILDGNWGDAPYSGPMGAMWSYIIYNDYKPAL-------------- 347 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C NC + CP +N + + IK M Sbjct: 348 -YCTHSGNCKEVCPMKINIPRVLEYIKYM 375 >gi|262043295|ref|ZP_06016424.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039319|gb|EEW40461.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 392 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTTCPVSRVNPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAQYGQQK 87 >gi|152971187|ref|YP_001336296.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895776|ref|YP_002920512.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Klebsiella pneumoniae NTUH-K2044] gi|330003656|ref|ZP_08304701.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Klebsiella sp. MS 92-3] gi|150956036|gb|ABR78066.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548094|dbj|BAH64445.1| sn-glycerol-3-phosphate dehydrogenase K-small subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328536880|gb|EGF63181.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Klebsiella sp. MS 92-3] Length = 392 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTTCPVSRVNPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAQYGQQK 87 >gi|52548898|gb|AAU82747.1| heterodisulfide reductase subunit C [uncultured archaeon GZfos19C8] Length = 185 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 13/96 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 ++ L ECV C C+ CPS + L+Q L+D R+E + + Sbjct: 20 HLETLRECVQCGKCTGGCPSGR---NTAFRTRKLMQMA--LVDMREE--------IFNAP 66 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CPKG+ I I+ + Sbjct: 67 ELWFCSTCYTCYERCPKGVKVTDVIRTIRNLAAKEG 102 >gi|53714878|ref|YP_100870.1| putative electron transport protein [Bacteroides fragilis YCH46] gi|60682859|ref|YP_213003.1| hypothetical protein BF3397 [Bacteroides fragilis NCTC 9343] gi|253565982|ref|ZP_04843436.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265766734|ref|ZP_06094563.1| iron-sulfur cluster-binding protein [Bacteroides sp. 2_1_16] gi|52217743|dbj|BAD50336.1| putative electron transport protein [Bacteroides fragilis YCH46] gi|60494293|emb|CAH09088.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251945086|gb|EES85524.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263253111|gb|EEZ24587.1| iron-sulfur cluster-binding protein [Bacteroides sp. 2_1_16] gi|301164328|emb|CBW23886.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 461 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 14/98 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLD 216 C+ C C +CP Y + Y P + D + D Sbjct: 293 AHPDHIKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMAHDP-----EKYYD 347 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 NL C M+C+ CP ++ A+ I K + L Sbjct: 348 NLS------ACSLCMSCSDVCPAKVDLAEQIYKWRQDL 379 >gi|261344975|ref|ZP_05972619.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Providencia rustigianii DSM 4541] gi|282567120|gb|EFB72655.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Providencia rustigianii DSM 4541] Length = 398 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 10/96 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C+T CP N Y GP D + D + Sbjct: 4 HDASFESCIKCTVCTTYCPVAKANP-LYPGPKQA---------GPDGERLRLKDPMMYDD 53 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + IA+ + +K Sbjct: 54 ALKFCTNCKRCEVACPSDVKIGDIIARARSTYSQQK 89 >gi|169831413|ref|YP_001717395.1| heterodisulfide reductase subunit C-like protein [Candidatus Desulforudis audaxviator MP104C] gi|169638257|gb|ACA59763.1| Heterodisulfide reductase subunit C-like protein [Candidatus Desulforudis audaxviator MP104C] Length = 160 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + S + + + + C+ C CS C + P +++ Sbjct: 24 AQYYRTRGSREMTRVEMTLQVKEISGQNPFLCMQCGLCSAGCTGRGIMD---MLPRQVMR 80 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ + D ++ C T + CT CP+G++ A+ + ++ + L R Sbjct: 81 LIQFGN-----------AQVLDNRSIWMCTTCLTCTARCPRGIDIARVMEALRTINLRRG 129 >gi|311745949|ref|ZP_07719734.1| putative iron-sulfur cluster binding protein [Algoriphagus sp. PR1] gi|126576158|gb|EAZ80436.1| putative iron-sulfur cluster binding protein [Algoriphagus sp. PR1] Length = 452 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 8/127 (6%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Y+ H K + + R K +C+ C C +CP Y + Sbjct: 263 NYNSHFRSPAPGKELHLILVDNGRTNQLARDKFKNSLKCIRCGACMNTCPIYRRSGGYSY 322 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 G + L D + L + +C+ CP +N + + + + Sbjct: 323 GSTVPGPIGSILSPGIDVKKYSTLP--------FASTLCGSCSDVCPVKINIHEQLYEWR 374 Query: 252 MMLLDRK 258 + + Sbjct: 375 QEITKAQ 381 >gi|32266150|ref|NP_860182.1| hypothetical protein HH0651 [Helicobacter hepaticus ATCC 51449] gi|32262200|gb|AAP77248.1| conserved hypothetical protein containing a ferredoxin-like domain [Helicobacter hepaticus ATCC 51449] Length = 479 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 17/101 (16%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C C CP Y Y GP + + Sbjct: 303 HFYRSLSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVI------------SPQLFGM 350 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C++ CP + A+ I ++ + + Sbjct: 351 KNFGHMVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQG 391 >gi|160887246|ref|ZP_02068249.1| hypothetical protein BACOVA_05263 [Bacteroides ovatus ATCC 8483] gi|260171436|ref|ZP_05757848.1| putative electron transport protein [Bacteroides sp. D2] gi|315919751|ref|ZP_07915991.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156107657|gb|EDO09402.1| hypothetical protein BACOVA_05263 [Bacteroides ovatus ATCC 8483] gi|313693626|gb|EFS30461.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 461 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSTLLSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + D + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMAHDP-----EKYYDNLS------ACSLCMSCSDVCPVQVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|20089573|ref|NP_615648.1| heterodisulfide reductase, subunit D [Methanosarcina acetivorans C2A] gi|41017215|sp|Q8TSV7|HDRD_METAC RecName: Full=CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D gi|19914489|gb|AAM04128.1| heterodisulfide reductase, subunit D [Methanosarcina acetivorans C2A] Length = 409 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 13/110 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLID----------SRDE 209 ++ L C C C CP+Y + + L P + +R ++ E Sbjct: 15 AVQLMELDSCTRCGECVKWCPTYAASGQKPGLAPRDKILRWRQYMNKSYGLKAKLFGPTE 74 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ +D ++ C T C C G+N + ++ L+ + I Sbjct: 75 IPQSELEEFKDD--VHGCTTCGICATVCESGINTVELWESLRTNLVKKGI 122 >gi|171184818|ref|YP_001793737.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934030|gb|ACB39291.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 471 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + ++R + CV C C +CP+Y D P + R ++ + L Sbjct: 50 EYRKNRNIKIAVDTCVHCGACIDACPTYLTTKDVKNSPVGRAELIRRVL-KKGSVTDADL 108 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + + ++C T C CP G++ A ++ +L + Sbjct: 109 EEIYTYY--WQCLTCRRCGYVCPFGIDQADITRFVRGVLYE 147 >gi|124028219|ref|YP_001013539.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] gi|123978913|gb|ABM81194.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] Length = 486 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 15/104 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D K+ L CV C C+ +CP Y+ D P I + R++ + F G L L Sbjct: 42 DVVKLHFLEACVGCGVCAPACPYYYV--DERNAPMIKAEKARYIYRKKLTFAGRILGWLV 99 Query: 220 DP-------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + +YRC +C +CP G++ I ++ Sbjct: 100 NAKLPKSEKDLDEIVEAVYRCTNCGHCYLTCPFGIDSGSVIQEL 143 >gi|15668925|ref|NP_247729.1| heterodisulfide reductase subunit HdrC [Methanocaldococcus jannaschii DSM 2661] gi|41017090|sp|Q58154|HDRC1_METJA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit C 1 gi|1591457|gb|AAB98738.1| heterodisulfide reductase, subunit C (hdrC) [Methanocaldococcus jannaschii DSM 2661] Length = 194 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 13/96 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C+ SCPS + L++ ++ + S + D Sbjct: 28 HVSSFKACYQCGTCTGSCPSGRITA---FRTRKLIRYAQFGMKS----------AIIDSE 74 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+ + I ++ + Sbjct: 75 DLWMCTTCYECYERCPRTVKITDIIKVLRNIAAREG 110 >gi|305431992|ref|ZP_07401159.1| iron-sulfur cluster-binding domain protein [Campylobacter coli JV20] gi|304445076|gb|EFM37722.1| iron-sulfur cluster-binding domain protein [Campylobacter coli JV20] Length = 436 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 CV C C C + N D P +D ++ E+ Sbjct: 10 RFDGMVMNFSQISDACVKCGKCIPVCTIHEVNRDETTSPRGF-------LDLLAAYKEEK 62 Query: 215 LDNLEDPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ ++ +++ C NC + CP L AI +++ + + Sbjct: 63 LELDKEAKKIFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 106 >gi|226328195|ref|ZP_03803713.1| hypothetical protein PROPEN_02087 [Proteus penneri ATCC 35198] gi|225202928|gb|EEG85282.1| hypothetical protein PROPEN_02087 [Proteus penneri ATCC 35198] Length = 359 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 19/97 (19%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP+Y Y GP + + L +D Sbjct: 197 RCIRCGACLNTCPAYRNIGGHAYGSIYPGPIGAVISPL-------------LGGYKDFHD 243 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C C CP + A+ I K + ++ + + Sbjct: 244 LPYACSLCNACNVVCPVKIPLAQLILKHRRVMAETGL 280 >gi|242309652|ref|ZP_04808807.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523653|gb|EEQ63519.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 479 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C C CP Y Y GP + + + + Sbjct: 305 HYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVIS------PQIFGLNKFSPM 358 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C C++ CP + A+ I ++ + + Sbjct: 359 LD------LCSLCGRCSEVCPVKIPLAELIRDLRSERVGQG 393 >gi|195953452|ref|YP_002121742.1| heterodisulfide reductase subunit C [Hydrogenobaculum sp. Y04AAS1] gi|195933064|gb|ACG57764.1| heterodisulfide reductase subunit C [Hydrogenobaculum sp. Y04AAS1] Length = 253 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + +C C+ C+ SCP + + ++Y P + R + DE Q Sbjct: 53 NHPQGKTINQCYQCSYCTASCPVHNYWDEKY-NPRHFIYLARLGM--LDELQKR------ 103 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++RC + CT CPKG+ + + I + R + Sbjct: 104 -ADVIWRCVSCHKCTHRCPKGVLVEEVLKVIVNQMSKRGL 142 >gi|258404332|ref|YP_003197074.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|258406433|ref|YP_003199175.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796559|gb|ACV67496.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] gi|257798660|gb|ACV69597.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 318 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 24/94 (25%), Gaps = 4/94 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L C+ C C +CP W+ + + Sbjct: 196 QYWTAQLDRCIRCYACRNACPMCVCRDHCIAQTRDPQ----WISQETGVAEKWLFQIIHA 251 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP + K+ + Sbjct: 252 QHLAGRCTECGECERACPMDIPILTLKRKMNREI 285 >gi|269468125|gb|EEZ79835.1| FAD/FMN-containing dehydrogenase [uncultured SUP05 cluster bacterium] Length = 1230 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 9/96 (9%) Query: 170 CVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C ++ + D+ +G ++ +A+ + +R + D D Sbjct: 771 CLRCGKCKDVCTTHVPEANLLYSPRDKIIGTNLISEAFLYEEQTRRGVSVDHFDEFNDI- 829 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ K+K +L+ +K Sbjct: 830 -ADHCTICHRCEAPCPVNIDFGDVSIKMKNILVKQK 864 >gi|322417568|ref|YP_004196791.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|322420732|ref|YP_004199955.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320123955|gb|ADW11515.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] gi|320127119|gb|ADW14679.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 337 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 37/125 (29%), Gaps = 21/125 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAYRWL 203 K K L ED CV C C+ CP+ G Sbjct: 209 KIKKWLEGHFEDPLWEKIADICVGCGACAFICPACHCFDINDEGSTDDGVRRKHWDACGF 268 Query: 204 I---------DSRDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKGLNPAKAI 247 + RD + + F+ Y C C ++CP G++ A+ + Sbjct: 269 AKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCIRACPVGIDIAEIL 328 Query: 248 AKIKM 252 A+I Sbjct: 329 AQINE 333 >gi|303249221|ref|ZP_07335458.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfovibrio fructosovorans JJ] gi|302489396|gb|EFL49347.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfovibrio fructosovorans JJ] Length = 323 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP + D + + + Sbjct: 201 AFWRYHMERCIRCYACRNACPMCVCRDHCIAQSREPHWLTQ-----EDTATEKLMFQVVH 255 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC C ++CP + + + Sbjct: 256 AMHLAGRCTECGECQRACPMDIPILALKKHLNRTI 290 >gi|301057978|ref|ZP_07199035.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300447945|gb|EFK11653.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 400 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-----------AYRWLIDSRDEFQGER 214 + C C C+ CP+ +++ L ++ +R L + Q E Sbjct: 15 EMGACTNCQACADVCPAVSSSANGELSAVYRMKGLQTLLKQRTGLFRRLFGKKPPAQEEL 74 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++RC NC ++CP G++ ++ ++ K Sbjct: 75 KHF---SNTVFRCTLCGNCQEACPVGIHLKDLWLSLRHDMVQSK 115 >gi|145590738|ref|YP_001152740.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282506|gb|ABP50088.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 97 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C C C +CP+Y R GP + + D + + R + Sbjct: 14 EASKCQFCGFCEFACPTYRALRMRQFGPRGRINIIK-NFDGKISEEAYR--------GVM 64 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + C CP G+ + I K L+ Sbjct: 65 TCLSCGACDPQCPAGIKITETIKAFKAYLIR 95 >gi|260769204|ref|ZP_05878137.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio furnissii CIP 102972] gi|260614542|gb|EEX39728.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio furnissii CIP 102972] Length = 408 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 29/99 (29%), Gaps = 10/99 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N D Y GP L E+ Sbjct: 1 MNAPFSKAAPLNTSFDQCIKCTVCTVYCPVAKANPD-YPGPKQCGPDGERLRIKNPEYYD 59 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E L C C +CP G+ IA + Sbjct: 60 EALK---------YCTNCKRCETACPSGVKIGDIIAVAR 89 >gi|114319975|ref|YP_741658.1| electron transport complex protein RnfC [Alkalilimnicola ehrlichii MLHE-1] gi|114226369|gb|ABI56168.1| electron transport complex, RnfABCDGE type, C subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 515 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 18/98 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ +CP Y RD Sbjct: 368 ELPPAEPPMPCIRCGACAEACPERLAPQQIYWHTRA-----------RDYEHA------- 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + ++ C C CP + + K + + Sbjct: 410 DDWGVFDCIECGACAWVCPSHIPLVQYFRHAKGAIAQK 447 >gi|78356160|ref|YP_387609.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218565|gb|ABB37914.1| putative adenylylsulfate reductase-associated electron transfer protein QmoC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 384 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + L +C CA CS +CP ++ P + W + R L Sbjct: 18 QAVGGESLKKCYQCATCSVACPISPASN---PYPRKEMVWASWGM---------RDKLLN 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ++ CH C+ CP+G P +A ++ M R Sbjct: 66 NVD-IWLCHNCGTCSDLCPRGAKPGDLLAALRNMAYQR 102 >gi|21227946|ref|NP_633868.1| heterodisulfide reductase subunit [Methanosarcina mazei Go1] gi|20906369|gb|AAM31540.1| Heterodisulfide reductase, subunit [Methanosarcina mazei Go1] Length = 420 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 13/135 (9%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPA 194 +S++ + K + + ++ L C C C CP+Y + + L P Sbjct: 1 MQSLQIREENKMAKKTPSIDTKNLTAVQLMELDSCTRCGECVKWCPTYAASGQKPGLAPR 60 Query: 195 ILLQAYRWLID----------SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + +R ++ E L+ +D ++ C T C C G+N Sbjct: 61 DKILRWRQFMNKSYGIKAKLFGPTEIPQSELEEFKDD--VHGCTTCGICATVCESGINTV 118 Query: 245 KAIAKIKMMLLDRKI 259 + ++ L+ + I Sbjct: 119 ELWEALRTNLVKKGI 133 >gi|317180449|dbj|BAJ58235.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Helicobacter pylori F32] Length = 429 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C SC Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPSCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|268611226|ref|ZP_06144953.1| putative heterodisulfide reductase, C subunit [Ruminococcus flavefaciens FD-1] Length = 127 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 13/108 (12%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + LQ R + +C+ C CS +CPSY Y + R I+ Sbjct: 1 MNKNLQEQIIRSSGVNVLKCMRCGKCSGTCPSYGE--MEYHPHQFVYMVERGEIEP---- 54 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L LY+C T C + CP+ + PAK + +++ + ++ Sbjct: 55 -------LLKSESLYKCLTCFACVERCPRNVEPAKVVEAVRLAAVRQQ 95 >gi|257076733|ref|ZP_05571094.1| iron-sulfur cluster-binding protein [Ferroplasma acidarmanus fer1] Length = 378 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 20/92 (21%) Query: 170 CVMCACCSTSCPSYWWNS-----DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C SCPSY Y GP ++ S + L Sbjct: 301 CIRCGRCYFSCPSYKLYGKDFGDSPYTGPTGIMW-------SAITMKKYDKSML------ 347 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP +N + I KIK ++ Sbjct: 348 --CMHSGGCHEVCPMDINIPQVIEKIKFRYME 377 >gi|206577147|ref|YP_002237354.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella pneumoniae 342] gi|288934283|ref|YP_003438342.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella variicola At-22] gi|290508486|ref|ZP_06547857.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella sp. 1_1_55] gi|206566205|gb|ACI07981.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella pneumoniae 342] gi|288889012|gb|ADC57330.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella variicola At-22] gi|289777880|gb|EFD85877.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Klebsiella sp. 1_1_55] Length = 392 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTTCPVSRVNPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAQYGQQK 87 >gi|39998386|ref|NP_954337.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] gi|39985332|gb|AAR36687.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] gi|298507327|gb|ADI86050.1| D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative [Geobacter sulfurreducens KN400] Length = 421 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L +CV C C CP++ + + ++ E + + Sbjct: 8 ENELKKCVKCGACRAHCPAFAAWQREPAVARGKVAIAQHILKGDIELDEQTYAVMS---- 63 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C + CP + + + + L R+ Sbjct: 64 --KCLLCGSCVEKCPNDVPTDEIVVTARESLARRR 96 >gi|311032046|ref|ZP_07710136.1| ferredoxin, 4Fe-4S [Bacillus sp. m3-13] Length = 708 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 35/133 (26%), Gaps = 38/133 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ +Y CV C C+ CP+ W + Sbjct: 272 QYQLIDMYACVECGRCTNMCPATGTGKMLSPMDLIIKIRDHLTDKGAAITSKSPWVPTYA 331 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + ++ ++ ++ C T NC CP Sbjct: 332 FNNTHGNQLAMMSAAGKGAQESAATIEYSPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 391 Query: 243 PAKAIAKIKMMLL 255 I ++ L+ Sbjct: 392 HVDKIIDLRRYLV 404 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 225 YRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I KI+ L D+ Sbjct: 279 YACVECGRCTNMCPATGTGKMLSPMDLIIKIRDHLTDKG 317 >gi|257095915|ref|YP_003169556.1| RnfABCDGE type electron transport complex subunit C [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048439|gb|ACV37627.1| electron transport complex, RnfABCDGE type, C subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 508 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 37/123 (30%), Gaps = 18/123 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + P + K A +L + C+ C C+ +CP +G Sbjct: 338 MMGIVLPHARVPIVKGASGILAFDAAEARTPAAGPCIRCGSCTRACP---------MGLL 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L A R +D D G F L C C CP + + + K L Sbjct: 389 PLEMASRIGVDDLDGATG---------FGLSDCIGCGCCAYVCPSHIPLVQYFSYAKGEL 439 Query: 255 LDR 257 R Sbjct: 440 SAR 442 >gi|147921463|ref|YP_684722.1| putative heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] gi|110620118|emb|CAJ35396.1| putative heterodisulfide reductase, subunit C [uncultured methanogenic archaeon RC-I] Length = 201 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 14/93 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R G +C+ C C+ SCP+ + D Y+ +++ + + DS E Sbjct: 27 RLSGSGYEKCMQCGRCTASCPAAYTFDD-YIPRSVMSRLALGMGDSLAEA---------- 75 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++RC +C CP+ + +A+ ++ Sbjct: 76 ---VWRCGQCYSCRARCPRNNSVGEAVLALRER 105 >gi|308274235|emb|CBX30834.1| hypothetical protein N47_E43460 [uncultured Desulfobacterium sp.] Length = 587 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 10/101 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYW--WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C C CST CP N + LG ++ S D D Sbjct: 492 QSYQANNYSCCFSCENCSTVCPVVRNYENPEEVLGMLPHQ-----IMRSLDLGLK---DL 543 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+G+ + ++K M L Sbjct: 544 ALGSKMLWDCVTCYQCQEHCPQGVKVTEVFYELKNMALKEA 584 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 4/95 (4%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--SRDEFQGERLDNLEDPFR 223 L C C CS C + + +L + + + + L ++ Sbjct: 334 ELDACTHCGTCSRRCSVRVAYFKNGNITVLPSEKMAFLKNYVANKKLSDDSLKTIQ--EG 391 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C CT +CP G+N + +K +L + Sbjct: 392 VYMCTNCDRCTVACPVGINLRELWQNVKEEMLQKG 426 >gi|229592662|ref|YP_002874781.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens SBW25] gi|229364528|emb|CAY52387.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens SBW25] Length = 936 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVIWRDIQAKKRAGVDTTELEAAYHYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C Q CP G+N + K++ DR Sbjct: 594 CAATGLCAQRCPVGINTGDLVKKLRSRDADR 624 >gi|212711006|ref|ZP_03319134.1| hypothetical protein PROVALCAL_02075 [Providencia alcalifaciens DSM 30120] gi|212686174|gb|EEB45702.1| hypothetical protein PROVALCAL_02075 [Providencia alcalifaciens DSM 30120] Length = 398 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 10/92 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+T CP N Y GP D + D + L Sbjct: 8 FESCIKCTVCTTYCPVAKANP-LYPGPKQA---------GPDGERLRLKDPMMYDDALKF 57 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP + IA+ + +K Sbjct: 58 CTNCKRCEVACPSDVKIGDIIARARNTYSQQK 89 >gi|119492291|ref|ZP_01623638.1| Putative electron transport protein [Lyngbya sp. PCC 8106] gi|119453176|gb|EAW34343.1| Putative electron transport protein [Lyngbya sp. PCC 8106] Length = 462 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 13/157 (8%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K A+ + L ++ + SHF + E L V Sbjct: 243 IPKVEHLAVFIRLLSRSALGSPITQYTSHFTQPKKGGEIHLVIVDNG-----RSERLGMA 297 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C +CP Y + G A+ +ID D + Sbjct: 298 DFWSSLKCIRCGACLNTCPVYRRSGGLSYG-AVYSGPLGMIIDPT-------FDLQKYSN 349 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y +C CP ++ K I K + ++ ++ + Sbjct: 350 LPYASTLCGSCGDVCPVKIDLPKQIYKWRRVMAEKHL 386 >gi|37676925|ref|NP_937321.1| Fe-S oxidoreductase [Vibrio vulnificus YJ016] gi|37201469|dbj|BAC97291.1| Fe-S oxidoreductase [Vibrio vulnificus YJ016] Length = 946 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 13/127 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + F Q + +P E L+ + C+ C C CPS Sbjct: 509 TIFDPQGLLNPGVIINDNPHSHIENLKPMPAA--DPLVDRCIECGFCEPVCPSRTLT--- 563 Query: 190 YLGPAILLQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 L P + YR L R E GE+ L+ + + + C C CP G+N Sbjct: 564 -LSPRQRIVLYRELQ--RRERAGEKIQASELEKVFEYQGIDTCAVTGLCADRCPVGINTG 620 Query: 245 KAIAKIK 251 + K++ Sbjct: 621 DLVKKLR 627 >gi|332667905|ref|YP_004450693.1| Lactate utilization protein B/C [Haliscomenobacter hydrossis DSM 1100] gi|332336719|gb|AEE53820.1| Lactate utilization protein B/C [Haliscomenobacter hydrossis DSM 1100] Length = 459 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ C C +CP Y + A+ L + D + L Sbjct: 297 REAFRNSLKCIRCGACMNTCPVYRRSGGHSYHNAVAGPIGAILAPNLDMSKYSDLP---- 352 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +C+ CP +N + + + + L + Sbjct: 353 ----FASTLCGSCSNVCPVKINIHEQLYEWRQELTRQG 386 >gi|325279152|ref|YP_004251694.1| hypothetical protein Odosp_0423 [Odoribacter splanchnicus DSM 20712] gi|324310961|gb|ADY31514.1| hypothetical protein Odosp_0423 [Odoribacter splanchnicus DSM 20712] Length = 230 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +D I+ L C+ C C+ CPS + + R + D+ E ++ Sbjct: 8 KKDIHYIESLNSCMNCGVCTAICPSAEFYNYDP----------RIIADTVQRQDEESIEG 57 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L ++ C M+C CP+ P I ++ + ++ Sbjct: 58 LLKSDTIWYCGECMSCKTRCPRCNTPGGIIMALRRLSQEKG 98 >gi|302555947|ref|ZP_07308289.1| iron-sulfur cluster-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302473565|gb|EFL36658.1| iron-sulfur cluster-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 492 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKIVPTWRDLEVFLQTLPRSSTAERMNPYTSTWTGTTDQDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 D + D L C+ C+ C CP Y Y GP + Sbjct: 292 GTFHLVLLDNGRSDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ +++ Sbjct: 351 ---LSPQLRGTGSE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVE 399 >gi|170290600|ref|YP_001737416.1| hypothetical protein Kcr_0987 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174680|gb|ACB07733.1| protein of unknown function DUF162 [Candidatus Korarchaeum cryptofilum OPF8] Length = 390 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 15/89 (16%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP +W W + + + + ++ S++E Sbjct: 305 CLRCGACQYLCPVFWIVGGYWGGLKSVYSGGIGVIWEYITGSKEEATKHS---------- 354 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C ++CP ++ K + +I+ Sbjct: 355 FACLLCGRCKEACPMRIDQQKILREIRRR 383 >gi|315586654|gb|ADU41035.1| iron-sulfur cluster-binding domain protein [Helicobacter pylori 35A] Length = 429 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV CA C C Y + D P L R ++ + LE C Sbjct: 11 DTCVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDANLKHLLET------C 64 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 65 FLCTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|254507941|ref|ZP_05120070.1| FAD linked oxidase, C-terminal domain protein [Vibrio parahaemolyticus 16] gi|219549177|gb|EED26173.1| FAD linked oxidase, C-terminal domain protein [Vibrio parahaemolyticus 16] Length = 945 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 9/88 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----LDNLEDPFR 223 C+ C C CPS L P + YR + R L+ + + Sbjct: 544 DRCIECGFCEPVCPSRTLT----LSPRQRIVLYR-ELQRRKAAGETVTVSELEKVFEYQG 598 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C CP G+N + +++ Sbjct: 599 LDTCAATGLCADRCPVGINTGDLVKQLR 626 >gi|170717342|ref|YP_001784451.1| iron-sulfur cluster binding protein [Haemophilus somnus 2336] gi|168825471|gb|ACA30842.1| iron-sulfur cluster binding protein [Haemophilus somnus 2336] Length = 470 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 46/177 (25%), Gaps = 11/177 (6%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + G LA + + + L +V L + E Sbjct: 229 TTVPKTHIAVMGMERLAPT----FQEVDVLITMLARSAVGAKLTAYNTWLTGPRLEGETD 284 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +S + + C+ C C +CP+Y G Sbjct: 285 GPEDFHLVIVDNGRSSILESEFKEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSV 344 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + E + Y C C CP + A+ I+K + + + Sbjct: 345 IS-PLLGGYEEFKELP------YACSLCTACNSVCPVKIPLAQLISKHREHIAQAGM 394 >gi|113460855|ref|YP_718922.1| hypothetical protein HS_0710 [Haemophilus somnus 129PT] gi|112822898|gb|ABI24987.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 470 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 46/177 (25%), Gaps = 11/177 (6%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + G LA + + + L +V L + E Sbjct: 229 TTVPKTHIAVMGMERLAPT----FQEVDVLITMLARSAVGAKLTAYNTWLTGPRLEGETD 284 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +S + + C+ C C +CP+Y G Sbjct: 285 GPEDFHLVIVDNGRSSILESEFKEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSV 344 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + E + Y C C CP + A+ I+K + + + Sbjct: 345 IS-PLLGGYEEFKELP------YACSLCTACNSVCPVKIPLAQLISKHREHIAQAGM 394 >gi|295098101|emb|CBK87191.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 396 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T CP + Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTVCPVSGVDPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARARYSTQK 87 >gi|218779414|ref|YP_002430732.1| heterodisulfide reductase [Desulfatibacillum alkenivorans AK-01] gi|218760798|gb|ACL03264.1| Quinone-interacting membrane-bound oxidoreductase, QmoC [Desulfatibacillum alkenivorans AK-01] Length = 413 Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP + D P + A W + +RL N D ++ Sbjct: 24 LKKCFQCATCSVACPI---SPDNKPFPRKEMIAASWGL-------KDRLVNNVD---IWL 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C+ CP+G P + ++ + ++ Sbjct: 71 CHQCGDCSVMCPRGARPGDVLGAVRNVAIEE 101 >gi|300712817|ref|YP_003738629.1| hypothetical protein HacjB3_17478 [Halalkalicoccus jeotgali B3] gi|299126501|gb|ADJ16838.1| hypothetical protein HacjB3_17478 [Halalkalicoccus jeotgali B3] Length = 706 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 10/142 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPS 182 ++ ++ ++ L V +S +D + L + C C CS CP+ Sbjct: 253 MLSSFANVAARDEKAGRVLPNVPADLDATNAESIDDFTWKELLDQDACTKCGRCSAVCPA 312 Query: 183 YWWNSDRYLGPAILL---QAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQS 236 S R L P ++ + YR +D+ + + ++ D + C M C + Sbjct: 313 KA--SGRPLDPRDVILDLKGYRAEVDAGAGNKPIIADGGASVIDSETMESCMACMACMDA 370 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP + + ++ L D+ Sbjct: 371 CPVEIEHLSSFTRMNRQLTDQG 392 >gi|261402560|ref|YP_003246784.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus vulcanius M7] gi|261369553|gb|ACX72302.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus vulcanius M7] Length = 194 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 13/96 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C+ SCPS + L++ ++ + S + D Sbjct: 28 HVSSFKACYQCGTCTGSCPSGRITA---FRTRKLIRYAQFGMKS----------AIIDSE 74 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+ + I ++ + Sbjct: 75 DLWMCTTCYECYERCPRTVKITDIIKVLRNIAAREG 110 >gi|149378307|ref|ZP_01896016.1| iron-sulfur cluster binding protein [Marinobacter algicola DG893] gi|149357414|gb|EDM45927.1| iron-sulfur cluster binding protein [Marinobacter algicola DG893] Length = 483 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y G + L+ R +L L Sbjct: 322 RCIRCGACMNHCPVYTRVGGHTYGTTYPGPIGKILMPHMVGLDEGR--HLPTASSL---- 375 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + + +++ +D Sbjct: 376 -CGACGEVCPVKIPIPDLLVRLRQESVD 402 >gi|134298502|ref|YP_001111998.1| putative heterodisulfide reductase subunit C [Desulfotomaculum reducens MI-1] gi|134051202|gb|ABO49173.1| putative heterodisulfide reductase, C subunit [Desulfotomaculum reducens MI-1] Length = 200 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C T+C L P ++Q R R D + ++ C Sbjct: 33 MCMQCGICPTTCALKEKMD---LSPRRIIQLIR----------AGRKDEVLQANTMWLCT 79 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP+G+ + ++ + ++ I Sbjct: 80 SCYACACRCPRGVPMMDVMHDLRHLAVENGI 110 >gi|189461597|ref|ZP_03010382.1| hypothetical protein BACCOP_02256 [Bacteroides coprocola DSM 17136] gi|189431707|gb|EDV00692.1| hypothetical protein BACCOP_02256 [Bacteroides coprocola DSM 17136] Length = 455 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 34/129 (26%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + R + +L E C+ C C +CP Y Sbjct: 263 ITTYTSHYRKPRKGGELHIIIVDNGRSRILADQE----HVKALNCLRCGACMNTCPVYR- 317 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ G L + C +C CP ++ A Sbjct: 318 -------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACSLCYSCQNVCPAKVDLAD 370 Query: 246 AIAKIKMML 254 I + L Sbjct: 371 QIYHWRQQL 379 >gi|323967685|gb|EGB63097.1| glycerol-3-phosphate dehydrogenase [Escherichia coli M863] gi|327252514|gb|EGE64173.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli STEC_7v] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|313159450|gb|EFR58813.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 232 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 AK ED + +GL C+ C C+ CP+ + + P ++ ++ +RD Sbjct: 1 MAKYFDMLMEDVRMKEGLQSCMNCGVCTGVCPAAEFYN---YDPRQIVN----IVQTRD- 52 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ++ L ++ C M+C CP+G P I ++ Sbjct: 53 --DDAIEELLKSDTIWYCGECMSCRPRCPRGNTPGYVIQALR 92 >gi|218548304|ref|YP_002382095.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia fergusonii ATCC 35469] gi|218355845|emb|CAQ88458.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia fergusonii ATCC 35469] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|198275683|ref|ZP_03208214.1| hypothetical protein BACPLE_01855 [Bacteroides plebeius DSM 17135] gi|198271312|gb|EDY95582.1| hypothetical protein BACPLE_01855 [Bacteroides plebeius DSM 17135] Length = 455 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 35/129 (27%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + R + +L E C+ C C +CP Y Sbjct: 263 ITTYTSHYRKPRKGGELHIIIVDNGRSNILADQE----HVKTLNCLRCGACMNTCPVYR- 317 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ G L + C +C CP ++ A Sbjct: 318 -------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACSLCYSCQNVCPAKVDLAD 370 Query: 246 AIAKIKMML 254 I + + L Sbjct: 371 QIYRWRQKL 379 >gi|157148422|ref|YP_001455741.1| hypothetical protein CKO_04246 [Citrobacter koseri ATCC BAA-895] gi|157085627|gb|ABV15305.1| hypothetical protein CKO_04246 [Citrobacter koseri ATCC BAA-895] Length = 475 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 56/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFADVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SQVLGSEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ + I Sbjct: 358 LP------YACSLCTACDSVCPVRIPLSKLILRHRRVMAEEGI 394 >gi|113460659|ref|YP_718725.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus somnus 129PT] gi|170718037|ref|YP_001785077.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus somnus 2336] gi|112822702|gb|ABI24791.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Haemophilus somnus 129PT] gi|168826166|gb|ACA31537.1| protein of unknown function DUF224 cysteine-rich region domain protein [Haemophilus somnus 2336] Length = 423 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 28/99 (28%), Gaps = 10/99 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ CP N Y GP D + Sbjct: 20 QHHTDESFESCIKCTACTVVCPVSRQNP-FYPGPKQA---------GPDGERLRLKSAAL 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + LD++ Sbjct: 70 YDEALKYCINCKRCEVACPSDVKIGDIIIRARNKYLDQQ 108 >gi|317014087|gb|ADU81523.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori Gambia94/24] Length = 433 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDANLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|299141419|ref|ZP_07034556.1| iron-sulfur cluster binding protein [Prevotella oris C735] gi|298577379|gb|EFI49248.1| iron-sulfur cluster binding protein [Prevotella oris C735] Length = 457 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + ++L + E +C+ C C +CP Y Sbjct: 264 TTTYTSHFRQARPGGEMHVVLVDNGRSKILGNSE----HWETLKCIRCGACMNTCPVYRR 319 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D+R + C ++C CP + Sbjct: 320 SGGYSYSYFIPGPIGVNLGMLHDARKHAGN-----------VSACSLCLSCDNVCPAEVA 368 Query: 243 PAKAIAKIKMML 254 P I + ML Sbjct: 369 PGSQIYVWRQML 380 >gi|332525143|ref|ZP_08401320.1| electron transport complex, RnfABCDGE type, C subunit [Rubrivivax benzoatilyticus JA2] gi|332108429|gb|EGJ09653.1| electron transport complex, RnfABCDGE type, C subunit [Rubrivivax benzoatilyticus JA2] Length = 462 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 34/131 (25%), Gaps = 17/131 (12%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V Q + T + + Y C+ C C SCP Sbjct: 336 VLGGPMMGQSVAALDTPVTKGVSGVLVFRREDMAERDDRRTYPCIKCGQCVESCPM---- 391 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 L P+ L D + + L C CT CP + + Sbjct: 392 ---GLNPSALGML----------AAKREYDEMGAHYHLGECFECGCCTYVCPSNIPLVQQ 438 Query: 247 IAKIKMMLLDR 257 K +L +R Sbjct: 439 FRVAKQVLRER 449 >gi|325496718|gb|EGC94577.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia fergusonii ECD227] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|302562285|ref|ZP_07314627.1| iron-sulfur cluster-binding protein [Streptomyces griseoflavus Tu4000] gi|302479903|gb|EFL42996.1| iron-sulfur cluster-binding protein [Streptomyces griseoflavus Tu4000] Length = 492 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKVVPAWQDLEVFLQTLPRSSTAERMNPYTSMWTGTTDEDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 RTFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ +++ Sbjct: 351 ---LSPQLRGTGSE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVE 399 >gi|156740815|ref|YP_001430944.1| hypothetical protein Rcas_0809 [Roseiflexus castenholzii DSM 13941] gi|156232143|gb|ABU56926.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 727 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 48/213 (22%), Gaps = 51/213 (23%) Query: 93 DGTNTLACVKDMKDIKGAIA----VYPLPHMSVIKDLVVDMSHFYSQHRS------IEPW 142 DG+ + + + +P + ++ F+ I Sbjct: 220 DGSPVGLGLHLFFWFSHTLVTAAFLASIPFSKLQHIFYTPLNTFFRDLEPKGALTPIPNL 279 Query: 143 LKTVSPKPAKELLQSHEDRQKIDG--LYECVMCACCSTSCPSYWW--------------- 185 + + + + D C+ C C + CP+Y Sbjct: 280 EAEIEKDEPRLGVATLADFTWKQRLDFDACMQCGRCQSKCPAYASGSQLSPKFLITKMAN 339 Query: 186 ------------------------NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + P Q ID E + Sbjct: 340 LQRGEPVLLHDGSLGRAHTVLTTDQYNEAPKPVAERQPVYAKIDGDRETLPLIEHEIYTE 399 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C T C + CP + I ++ L Sbjct: 400 NEIWSCTTCRACMEECPAMIEHVDLIVDVRRNL 432 >gi|146179|gb|AAA83866.1| glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|332702747|ref|ZP_08422835.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552896|gb|EGJ49940.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 397 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 11/94 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SR 207 ++ +C++C C CP L P D Sbjct: 3 HQQQKDYLCLHDGTHLAPKCILCGKCLEVCPLVAATGREELSPRAKFHLAERAADAGNGL 62 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 DE + RL + C C ++CP GL Sbjct: 63 DEKKAARLAAM--------CLACGRCEKACPHGL 88 >gi|324112779|gb|EGC06755.1| glycerol-3-phosphate dehydrogenase [Escherichia fergusonii B253] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|291435499|ref|ZP_06574889.1| iron-sulfur protein [Streptomyces ghanaensis ATCC 14672] gi|291338394|gb|EFE65350.1| iron-sulfur protein [Streptomyces ghanaensis ATCC 14672] Length = 418 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 45/178 (25%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V + S + W T Sbjct: 240 NGRMCLTLPETLISVVGIEKTVPTWRDLEVFLQTLPRSSTAERMNPYTSTWTGTTDGDGP 299 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 300 RVFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 358 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ ++ Sbjct: 359 ---LSPQLRGTGSE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVQ 407 >gi|317152501|ref|YP_004120549.1| hypothetical protein Daes_0786 [Desulfovibrio aespoeensis Aspo-2] gi|316942752|gb|ADU61803.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 439 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 10/92 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C++C CS CP +++ + + +D + Sbjct: 15 DFLNRFDFSACMICGTCSNGCPVTGTPGMGGWDTRKVMRMLAYGM----------VDEVV 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + C C SCP G++ + +K Sbjct: 65 DSKFPWLCTGCGRCAYSCPMGIDIPAVMGHMK 96 >gi|239927152|ref|ZP_04684105.1| iron-sulfur protein [Streptomyces ghanaensis ATCC 14672] Length = 411 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 45/178 (25%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V + S + W T Sbjct: 233 NGRMCLTLPETLISVVGIEKTVPTWRDLEVFLQTLPRSSTAERMNPYTSTWTGTTDGDGP 292 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 293 RVFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 351 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ ++ Sbjct: 352 ---LSPQLRGTGSE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVQ 400 >gi|255089048|ref|XP_002506446.1| glycolate dehydrogenase [Micromonas sp. RCC299] gi|226521718|gb|ACO67704.1| glycolate dehydrogenase [Micromonas sp. RCC299] Length = 959 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 13/143 (9%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL+ ++ + + ++ P + C+ C C ++CPS Sbjct: 499 DLMWELKELFDP-NYVLNPGVILNRDPDTHQKFLKPKPVADPIVDMCMECGFCESNCPSR 557 Query: 184 WWNSDRYLGPAILLQAYRWL-----IDSRDEFQGERLDNLEDPFRLYRCHTI---MNCTQ 235 D L P + YR + I SR + + +RLD D F T C Sbjct: 558 ----DLSLTPRQRITVYREISRLQAIPSRTQAEQKRLDEFLDNFTYEGNSTCAADGMCQV 613 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 CP G+N + I I+ L + Sbjct: 614 KCPVGINTGELIKSIRERELKNQ 636 >gi|56477735|ref|YP_159324.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] gi|56313778|emb|CAI08423.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] Length = 480 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 21/98 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C CP Y Y GP + Y + ++ D Sbjct: 315 RCIRCGACMNHCPVYQSVGGHAYGWVYPGPMGSVLTPLYTGIENALDLPHAS-------- 366 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K++ ++RK+ Sbjct: 367 ------TLCNQCGVVCPVKIPLPELLRKLREKQVERKL 398 >gi|323977557|gb|EGB72643.1| glycerol-3-phosphate dehydrogenase [Escherichia coli TW10509] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|331671866|ref|ZP_08372662.1| iron-sulfur cluster-binding protein [Escherichia coli TA280] gi|331070855|gb|EGI42214.1| iron-sulfur cluster-binding protein [Escherichia coli TA280] Length = 475 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFSVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 358 LP------YACSLCTACDNMCPVRIPLSKLILRHRRVMAEKGI 394 >gi|37676181|ref|NP_936577.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio vulnificus YJ016] gi|37200722|dbj|BAC96547.1| Fe-S oxidoreductase [Vibrio vulnificus YJ016] Length = 410 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 12/111 (10%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + + +C+ C C+ CP N +Y GP S + Sbjct: 1 MRTMMNAFAKHAPTNTTFDQCIKCTVCTVYCPVAKANP-QYPGPK----------QSGPD 49 Query: 210 FQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + RL N E L C C +CP G+ IA + + + Sbjct: 50 GERLRLKNPEYYDDLLKLCTNCKRCETACPSGVKIGDIIAVARGKYGKKTL 100 >gi|110667691|ref|YP_657502.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haloquadratum walsbyi DSM 16790] gi|109625438|emb|CAJ51864.1| glycerol-3-phosphate dehydrogenase chain C [Haloquadratum walsbyi DSM 16790] Length = 459 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 9/124 (7%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + T S ++ D G C C+ C TSCP + D + GP Sbjct: 11 YEFEPTSPNTGSEFEPVDIFPDSTDFDLRPGADSCYKCSMCDTSCPVAEVDDD-FPGPKF 69 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L S DE E + C M C +CP G+ ++ + + Sbjct: 70 QGPEQWRLKRSDDEH--------EIDDSIMSCSNCMRCDDACPSGVPLSQMHNTARGEYV 121 Query: 256 DRKI 259 ++++ Sbjct: 122 EKQM 125 >gi|94264472|ref|ZP_01288260.1| Protein of unknown function DUF224, cysteine-rich region [delta proteobacterium MLMS-1] gi|93455103|gb|EAT05327.1| Protein of unknown function DUF224, cysteine-rich region [delta proteobacterium MLMS-1] Length = 412 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 30/89 (33%), Gaps = 8/89 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C CST CP Y + Y L SR E L C Sbjct: 12 CAKCGACSTVCPVYRVSGREYHTGRGKLHLL-----SRLEPATASATMA---EILSHCLL 63 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ +C +G+ A+ +A + L + Sbjct: 64 CGACSATCSRGIPVAEQLAAARAELTRQA 92 >gi|325300702|ref|YP_004260619.1| Lactate utilization protein B/C [Bacteroides salanitronis DSM 18170] gi|324320255|gb|ADY38146.1| Lactate utilization protein B/C [Bacteroides salanitronis DSM 18170] Length = 454 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 36/129 (27%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + R + ++L E C+ C C +CP Y Sbjct: 263 ITSYTSHYRKPRKGGELHIIIVDNGRSQILADQE----HVKTLNCLRCGACMNTCPVYR- 317 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ G L + C +C CP ++ A Sbjct: 318 -------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACSLCYSCQNVCPAKVDLAD 370 Query: 246 AIAKIKMML 254 I + + + Sbjct: 371 QIYRWRQRM 379 >gi|301059920|ref|ZP_07200804.1| conserved domain protein [delta proteobacterium NaphS2] gi|300445975|gb|EFK09856.1| conserved domain protein [delta proteobacterium NaphS2] Length = 249 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAY 200 + + P + L+ + + L C C C+ +C Y + D + PA ++ Sbjct: 1 MSEEIKPHEIVDFLKPRLNARFRTWLKICARCGLCADTCHYYRAHGNDPKMIPAYKVRFL 60 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R L+ + + L + D +Y C+ CT CP G++ A I+ ++ ML Sbjct: 61 RELLRKKGRVDRDYLQKIYDT--IYHECNMCRRCTLFCPFGIDIALMISLLRAMLF 114 >gi|183599241|ref|ZP_02960734.1| hypothetical protein PROSTU_02700 [Providencia stuartii ATCC 25827] gi|188021471|gb|EDU59511.1| hypothetical protein PROSTU_02700 [Providencia stuartii ATCC 25827] Length = 969 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 28/120 (23%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L+ S E+ + C+ C C +CP+ A+L Q W ++ Sbjct: 358 CNCLLVPSVEEVGQKPIEEACIRCGLCVEACPA-----------ALLPQQLYWFSKGKEH 406 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRKI 259 + + L+ C C CP + + I +IK + K+ Sbjct: 407 EKAQ-------KHNLFDCIECGACAYVCPSNIPLVQYYRQEKAEIREIKQEERRAAEAKL 459 >gi|294340884|emb|CAZ89279.1| putative ferredoxin [Thiomonas sp. 3As] Length = 473 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 21/101 (20%) Query: 166 GLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + +Y+ L ++D Q Sbjct: 307 EMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYQGLESTQDLPQAA----- 361 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + K++ +R++ Sbjct: 362 ---------TLCGQCQVVCPMKIPLPDLLRKMREQQFEREM 393 >gi|271500291|ref|YP_003333316.1| iron-sulfur cluster-binding protein [Dickeya dadantii Ech586] gi|270343846|gb|ACZ76611.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech586] Length = 473 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 61/226 (26%), Gaps = 29/226 (12%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIRQDFLSAEIGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFEEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGE 213 S + + C+ C C +CP+Y G P + L+ D+F+ Sbjct: 299 STVLGSQFKDILRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYDDFKDL 358 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I K + ++ + + Sbjct: 359 ----------PYACSLCTACDSVCPVQIPLSKLILKHRRVMAEGGL 394 >gi|256789624|ref|ZP_05528055.1| iron-sulfur protein [Streptomyces lividans TK24] gi|289773513|ref|ZP_06532891.1| iron-sulfur cluster-binding protein [Streptomyces lividans TK24] gi|289703712|gb|EFD71141.1| iron-sulfur cluster-binding protein [Streptomyces lividans TK24] Length = 428 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKIVPRWQDLEVFLQTLPRSSTAERMNPYTSMWTGTTDEDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 RTFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ ++ Sbjct: 351 ---LSPQLRGTASE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVQ 399 >gi|21219337|ref|NP_625116.1| iron-sulfur protein [Streptomyces coelicolor A3(2)] gi|5459220|emb|CAB48893.1| putative iron-sulfur protein [Streptomyces coelicolor A3(2)] Length = 492 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKIVPRWQDLEVFLQTLPRSSTAERMNPYTSMWTGTTDEDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 RTFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ ++ Sbjct: 351 ---LSPQLRGTASE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVVQ 399 >gi|333029986|ref|ZP_08458047.1| Lactate utilization protein B/C [Bacteroides coprosuis DSM 18011] gi|332740583|gb|EGJ71065.1| Lactate utilization protein B/C [Bacteroides coprosuis DSM 18011] Length = 460 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + R + + ++L + L C+ CA C +CP Y Sbjct: 263 ITSYTSHYRKPREGGEYHIIIVDNGRSKMLADKD----HVDLLNCLRCAACMNTCPVYR- 317 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ D+ + + C ++C+ CP ++ + Sbjct: 318 -------RSGGYSYTYFIPGPIGVNLSMAKDSAKYYDNVSACSLCLSCSNVCPAKIDLGE 370 Query: 246 AIAKIKMML 254 I K + L Sbjct: 371 QIYKWRQTL 379 >gi|295707246|ref|YP_003600321.1| ferredoxin, 4Fe-4S [Bacillus megaterium DSM 319] gi|294804905|gb|ADF41971.1| ferredoxin, 4Fe-4S [Bacillus megaterium DSM 319] Length = 703 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 37/132 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W + Sbjct: 268 QHQLIDLYACVECGRCTNMCPATGTGKILSPMDLILKMRDHLTEKGAVVTSKAPWVPTYA 327 Query: 190 YLGPAILLQAY------RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + A + E+ + ++ ++ C T NC CP Sbjct: 328 FSKTKGNQLAMMAAGQGGAEAAATAEYNPALIGDVITEEEIWACTTCRNCEDQCPVMNEH 387 Query: 244 AKAIAKIKMMLL 255 I ++ L+ Sbjct: 388 VDKIIDLRRFLV 399 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 224 LYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 LY C CT CP K L+P I K++ L ++ Sbjct: 274 LYACVECGRCTNMCPATGTGKILSPMDLILKMRDHLTEKG 313 >gi|56758028|gb|AAW27154.1| SJCHGC06828 protein [Schistosoma japonicum] Length = 126 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 4/79 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKE----LLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 M++FY+Q+R IEP+LK + QS EDR K+DGLYEC++CACC TSCP YW Sbjct: 1 MNNFYAQYRFIEPYLKKKNVTEEDFGKKTYYQSVEDRAKLDGLYECLLCACCFTSCPFYW 60 Query: 185 WNSDRYLGPAILLQAYRWL 203 N D+YLGPA+LL YR L Sbjct: 61 GNGDKYLGPAVLLPGYRRL 79 >gi|41017207|sp|Q8PVW3|HDRD_METMA RecName: Full=CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D Length = 409 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 13/110 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLID----------SRDE 209 ++ L C C C CP+Y + + L P + +R ++ E Sbjct: 15 AVQLMELDSCTRCGECVKWCPTYAASGQKPGLAPRDKILRWRQFMNKSYGIKAKLFGPTE 74 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ +D ++ C T C C G+N + ++ L+ + I Sbjct: 75 IPQSELEEFKDD--VHGCTTCGICATVCESGINTVELWEALRTNLVKKGI 122 >gi|83591128|ref|YP_431137.1| hypothetical protein Moth_2307 [Moorella thermoacetica ATCC 39073] gi|83574042|gb|ABC20594.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 423 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 8/94 (8%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-AYRWLIDSRDEFQGERLDNLEDPFRL 224 + +C+ C C CP Y +Q AY +L R E + Sbjct: 13 EMAKCMKCGNCQAVCPLYKEILREAAVARGKVQLAYAYL---RGEIPATH----SLAEKF 65 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T M C +CP G+ K + + ++ K Sbjct: 66 LFCLTCMACVANCPSGVRVDKVVLAARAAMVREK 99 >gi|238798611|ref|ZP_04642087.1| hypothetical protein ymoll0001_37620 [Yersinia mollaretii ATCC 43969] gi|238717567|gb|EEQ09407.1| hypothetical protein ymoll0001_37620 [Yersinia mollaretii ATCC 43969] Length = 422 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 31/110 (28%), Gaps = 10/110 (9%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + L + + + C+ C C+T CP N Y GP Sbjct: 1 MPQNKESGTFSQDLPQDKHLARDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA----- 54 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 55 ----GPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 100 >gi|119871692|ref|YP_929699.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673100|gb|ABL87356.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 471 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Query: 136 HRSIEPWLKTVSPKPAKELLQ--SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H I + K + L+ ++R + CV C C +CP+Y D P Sbjct: 28 HERIGLKIPEDKYKYFLDRLREEYKKNRNIKIAVDTCVHCGACIDACPTYLTTKDLKNSP 87 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R ++ + L+ + + ++C T C CP G++ A ++ + Sbjct: 88 VGRAELIRRVL-KKGSVTDAELEEIYTYY--WQCLTCRRCGYVCPFGIDQADITRFVRGV 144 Query: 254 LLD 256 L + Sbjct: 145 LYE 147 >gi|317486315|ref|ZP_07945146.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922426|gb|EFV43681.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 432 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C + CP + L L E + L Sbjct: 15 DDKLAACMKCGMCQSVCPVFGETMMEADVTRGKLTLLEKLAHRLIEDPDAVNEKLN---- 70 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RC +C +CP G++ + + + ++ K Sbjct: 71 --RCLLCGSCQANCPSGVSILEIFMEARAIVAAYK 103 >gi|296103872|ref|YP_003614018.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058331|gb|ADF63069.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTVCPVSGVNPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 DALKYCINCKRCEVACPSDVKIGDIIQRARARYSTQK 87 >gi|27366475|ref|NP_762002.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio vulnificus CMCP6] gi|27358041|gb|AAO06992.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Vibrio vulnificus CMCP6] Length = 407 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 12/108 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + +C+ C C+ CP N +Y GP S + + Sbjct: 1 MMNAFAKHAPTNTTFDQCIKCTVCTVYCPVAKANP-QYPGPK----------QSGPDGER 49 Query: 213 ERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RL N E L C C +CP G+ IA + + + Sbjct: 50 LRLKNPEYYDDLLKLCTNCKRCETACPSGVKIGDIIAVARGKYGKKTL 97 >gi|320158313|ref|YP_004190691.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio vulnificus MO6-24/O] gi|319933625|gb|ADV88488.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio vulnificus MO6-24/O] Length = 407 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 12/108 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + +C+ C C+ CP N +Y GP S + + Sbjct: 1 MMNAFAKHAPTNTTFDQCIKCTVCTVYCPVAKANP-QYPGPK----------QSGPDGER 49 Query: 213 ERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RL N E L C C +CP G+ IA + + + Sbjct: 50 LRLKNPEYYDDLLKLCTNCKRCETACPSGVKIGDIIAVARGKYGKKTL 97 >gi|15678168|ref|NP_275283.1| hypothetical protein MTH140 [Methanothermobacter thermautotrophicus str. Delta H] gi|2621181|gb|AAB84646.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 396 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 12/99 (12%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ---AYRWLIDSRDEFQGERLDNLED 220 C+ C C SCP Y +R+ L ID R+ Sbjct: 288 YPEALLCIGCGSCIVSCPVYNTVGNRFGYRGYLGGRGVVMSSFIDGREAAA--------- 338 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 LY C CT+ CP A+ + +++ + I Sbjct: 339 ESGLYMCTLCGLCTEKCPVRPPAAEMMDRLRRNCVAAGI 377 >gi|327310422|ref|YP_004337319.1| 4Fe-4S ferredoxin [Thermoproteus uzoniensis 768-20] gi|326946901|gb|AEA12007.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoproteus uzoniensis 768-20] Length = 98 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C C C +CP+Y + GP + R D + Sbjct: 9 EASKCQFCGFCEFACPTYRSIRMMHFGPRGRVNLIR-NFDGELSEAA--------YTGIM 59 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C NC CP G+ A+ I + K +++ KI Sbjct: 60 TCLGCRNCDIQCPAGIKIAEIIHEFKAYIINEKI 93 >gi|193213852|ref|YP_001995051.1| hypothetical protein Ctha_0133 [Chloroherpeton thalassium ATCC 35110] gi|193087329|gb|ACF12604.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroherpeton thalassium ATCC 35110] Length = 428 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 ++ + L+ + L C CA C CP +G + Sbjct: 28 RMYVPREITDYDTQYLEEITALTGGESLGYCYQCAKCVGVCPV------DNVGSYAPRKI 81 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R + L+ +ED L+ C T MNC + CPK +N + + + + Sbjct: 82 FRKVQAG--------LNLIEDKD-LWMCTTCMNCLRVCPKEVNMLEIMPSAREKAV 128 >gi|292492763|ref|YP_003528202.1| electron transport complex, RnfABCDGE type, C subunit [Nitrosococcus halophilus Nc4] gi|291581358|gb|ADE15815.1| electron transport complex, RnfABCDGE type, C subunit [Nitrosococcus halophilus Nc4] Length = 515 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 37/143 (25%), Gaps = 27/143 (18%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA---------KELLQSHEDRQ 162 + L + L + R I LL ++R Sbjct: 302 NLEVLLGTPIRHLLTQCDTDIDRIDRLIMGGPMMGFTLHHDAAPVIKTTNCLLAGLQERV 361 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + C+ C C CP L P L R + LD L+D Sbjct: 362 RQPPVMPCIRCGACGEVCPVQ-------LLPQQLYWHAR----------AKELDKLQDYH 404 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + Sbjct: 405 -LFDCIECGCCDYVCPSHIPLVH 426 >gi|238784427|ref|ZP_04628437.1| hypothetical protein yberc0001_6870 [Yersinia bercovieri ATCC 43970] gi|238714719|gb|EEQ06721.1| hypothetical protein yberc0001_6870 [Yersinia bercovieri ATCC 43970] Length = 422 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 31/110 (28%), Gaps = 10/110 (9%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + + L + + + C+ C C+T CP N Y GP Sbjct: 1 MPQNKESGTFSQDLPQDKHLARDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA----- 54 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 55 ----GPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 100 >gi|227484615|ref|ZP_03914931.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Anaerococcus lactolyticus ATCC 51172] gi|227237335|gb|EEI87350.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Anaerococcus lactolyticus ATCC 51172] Length = 451 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 33/111 (29%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K +L I+ C+ C C + CP +L P + + +D R Sbjct: 358 EKATNCILVFDSKDAFIEDPTPCIRCGRCVSVCPV-------FLLPNYIHKHA---LDGR 407 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E D C +C+ CP +AI K + Sbjct: 408 FEKA--------DEEGALDCIECGSCSFVCPARRPLVEAIKFAKRQIRQAG 450 >gi|325271538|ref|ZP_08138051.1| FAD linked oxidase-like protein [Pseudomonas sp. TJI-51] gi|324103313|gb|EGC00647.1| FAD linked oxidase-like protein [Pseudomonas sp. TJI-51] Length = 951 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 5/93 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLY 225 + +C+ C C CPS L P + +R + + R L+ + + Sbjct: 537 IDKCIECGFCEPVCPSKGLT----LSPRQRIVIWRDIQAKKRAGVDTRELEAAYEYQGID 592 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ K Sbjct: 593 TCAATGLCAQRCPVGINTGELVKKLRGQHATHK 625 >gi|149928521|ref|ZP_01916752.1| Iron-sulfur cluster binding protein [Limnobacter sp. MED105] gi|149822760|gb|EDM82016.1| Iron-sulfur cluster binding protein [Limnobacter sp. MED105] Length = 468 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C+ C C CP Y Y GP + + + LD Sbjct: 305 FEEMLRCIKCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSY------TGIEKALDLP 358 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP + + K++ R + Sbjct: 359 QAA------TLCGECHVVCPVKIPLPDLLRKLREQQFSRGL 393 >gi|29833953|ref|NP_828587.1| iron-sulfur protein [Streptomyces avermitilis MA-4680] gi|29611078|dbj|BAC75122.1| putative iron-sulfur protein [Streptomyces avermitilis MA-4680] Length = 491 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V + S + W T Sbjct: 232 NGRMCLTLPETLISVVGIEKIVPTWQDLEVFLQTLPRSSTAERMNPYTSTWTGTTDGDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + D L C+ C+ C CP Y Y GP + Sbjct: 292 RTFHLVLLDNGRTDTLADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 350 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R D Y C + CP ++ + + ++ +++ Sbjct: 351 ---LSPQLRGTASE------IDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERIVE 399 >gi|48477474|ref|YP_023180.1| iron-sulfur cluster-binding protein [Picrophilus torridus DSM 9790] gi|48430122|gb|AAT42987.1| iron-sulfur cluster-binding protein [Picrophilus torridus DSM 9790] Length = 374 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C SCP+Y ++ P + ++D + C Sbjct: 298 CIRCGRCYFSCPAYRLYGRKFGNP----------PYTGPTGIMWSAITMQDYSKSQLCMH 347 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 C + CP ++ K I KIK Sbjct: 348 SGGCREVCPMNIDIPKIIEKIK 369 >gi|89072411|ref|ZP_01158990.1| Fe-S oxidoreductase [Photobacterium sp. SKA34] gi|89051943|gb|EAR57395.1| Fe-S oxidoreductase [Photobacterium sp. SKA34] Length = 941 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 10/144 (6%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + + + F + + + + L+ + + + +CV Sbjct: 490 IELEWGADGYQLMQNIKRIFDKRGILNPGVIINEDKESHIKNLKGMPEA--DELIDKCVE 547 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP----FRLYRCH 228 C C CPS + L P +R + R + R + + L C Sbjct: 548 CGFCEPVCPSRNLS----LTPRQRNTVFREISRLRKTNEDPRRLAQMEKTYRYYGLDTCA 603 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKM 252 C CP G+N + K++ Sbjct: 604 ATGLCADRCPVGINTGDLVRKLRQ 627 >gi|224419250|ref|ZP_03657256.1| hypothetical protein HcanM9_08258 [Helicobacter canadensis MIT 98-5491] gi|253826966|ref|ZP_04869851.1| putative iron-sulfur protein [Helicobacter canadensis MIT 98-5491] gi|313142753|ref|ZP_07804946.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510372|gb|EES89031.1| putative iron-sulfur protein [Helicobacter canadensis MIT 98-5491] gi|313131784|gb|EFR49401.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 480 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C C CP Y Y GP + + + + Sbjct: 306 HYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVIS------PQLFGLNKFSPM 359 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C C++ CP + A+ I ++ + + Sbjct: 360 LD------LCSLCGRCSEVCPVKIPLAELIRDLRSERVGQG 394 >gi|219847025|ref|YP_002461458.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Chloroflexus aggregans DSM 9485] gi|219541284|gb|ACL23022.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Chloroflexus aggregans DSM 9485] Length = 409 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 12/104 (11%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDSRDEFQGER 214 H + L C+ C C+++CP D + GP + QA R+ Sbjct: 1 MDHIELSLTQSLDHCIKCNICTSACPVAAVT-DAFPGPKYVGPQAQRF----------RH 49 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C Q CP G+ A+ A+ + ++ + Sbjct: 50 KAQPVPDASVDYCSGCRVCNQVCPTGVRIAELNARARAQMVAER 93 >gi|108563076|ref|YP_627392.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori HPAG1] gi|107836849|gb|ABF84718.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori HPAG1] Length = 433 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDANLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|332093854|gb|EGI98908.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella boydii 5216-82] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|194433306|ref|ZP_03065586.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella dysenteriae 1012] gi|194418400|gb|EDX34489.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella dysenteriae 1012] gi|332096123|gb|EGJ01126.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella dysenteriae 155-74] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|170683880|ref|YP_001744440.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli SMS-3-5] gi|170521598|gb|ACB19776.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli SMS-3-5] gi|323188030|gb|EFZ73325.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli RN587/1] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|82777653|ref|YP_404002.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella dysenteriae Sd197] gi|309785062|ref|ZP_07679695.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella dysenteriae 1617] gi|81241801|gb|ABB62511.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella dysenteriae Sd197] gi|308927432|gb|EFP72906.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella dysenteriae 1617] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|46580875|ref|YP_011683.1| oxidoreductase, selenocysteine-containing [Desulfovibrio vulgaris str. Hildenborough] gi|120601820|ref|YP_966220.1| oxidoreductase, selenocysteine-containing [Desulfovibrio vulgaris DP4] gi|46450295|gb|AAS96943.1| oxidoreductase, selenocysteine-containing [Desulfovibrio vulgaris str. Hildenborough] gi|120562049|gb|ABM27793.1| oxidoreductase, selenocysteine-containing [Desulfovibrio vulgaris DP4] gi|311234569|gb|ADP87423.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio vulgaris RCH1] Length = 432 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 13/108 (12%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K + E L C+ C CS CP+ + P L+ Sbjct: 7 KPHQEPGRTFKDRVMEVLPDGGNLNLCLTCGACSAGCPA---TGLEDMDPRKFLRMAALG 63 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D + + ++ C M C CP +N + + + Sbjct: 64 MD----------EEVTTTPWVWMCTMCMRCMYVCPMQINIPQLVYHAR 101 >gi|57168857|ref|ZP_00367987.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Campylobacter coli RM2228] gi|57019693|gb|EAL56379.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Campylobacter coli RM2228] Length = 421 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C C + N D P +D ++ E+L+ ++ Sbjct: 1 MNFSQISDACVKCGKCIPVCTIHEVNRDETTSPRGF-------LDLLAAYKEEKLELDKE 53 Query: 221 PFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +++ C NC + CP L AI +++ + + Sbjct: 54 AKKIFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|320174996|gb|EFW50111.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Shigella dysenteriae CDC 74-1112] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|320178785|gb|EFW53748.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Shigella boydii ATCC 9905] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|330912073|gb|EGH40583.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli AA86] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|302342064|ref|YP_003806593.1| hypothetical protein Deba_0627 [Desulfarculus baarsii DSM 2075] gi|301638677|gb|ADK83999.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfarculus baarsii DSM 2075] Length = 448 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 10/105 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 DR K L C+ C CS CP +L+ + + Sbjct: 11 PPEVADRLKAFNLNYCLTCGTCSGGCPITGTPGMEGWDTRKVLRMLVYGM---------- 60 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ D + C C +CP ++ + +K + ++ Sbjct: 61 VQDVVDSKFPWLCTGCGRCAAACPMDIDIPYIMGYMKHLRARDQV 105 >gi|295697060|ref|YP_003590298.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] gi|295412662|gb|ADG07154.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus tusciae DSM 2912] Length = 430 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V + + + L++ + + L C C C+ CP Sbjct: 14 VVVDGMRLTGSFNRMFEPRPITEYDLSALETVTSIEGAESLGYCYQCGKCTGVCPIDTVG 73 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 Q L+DS D L+ C T NC + CPK +N K Sbjct: 74 DYSPRKVFRRTQLGASLLDSPD---------------LWLCTTCRNCLRVCPKEVNMIKI 118 Query: 247 IAKIKMMLL 255 + ++ + Sbjct: 119 MPAVREKAV 127 >gi|253574753|ref|ZP_04852093.1| iron-sulfur cluster-binding protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845799|gb|EES73807.1| iron-sulfur cluster-binding protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 503 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 7/157 (4%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA-KELLQSHEDR 161 + LP + + L V MS R+ + Sbjct: 239 IPSWSDLEVMATLLPRSATGQKLTVYMSGITGPRRAADGDGPEEMHIIILDNGRSEQLGD 298 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP Y G L + ++ E D++ Sbjct: 299 PEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALNKNVAE-WDDIASA 357 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C ++CP + + ++ +++ Sbjct: 358 SSL-----CGACYEACPVKIPLHDMLVYLRRRKVEQG 389 >gi|218705775|ref|YP_002413294.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli UMN026] gi|300897686|ref|ZP_07116084.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 198-1] gi|218432872|emb|CAR13766.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli UMN026] gi|284922235|emb|CBG35318.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 042] gi|300358564|gb|EFJ74434.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 198-1] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|73669110|ref|YP_305125.1| CoB-CoM heterodisulfide reductase subunit D [Methanosarcina barkeri str. Fusaro] gi|85682778|sp|P96797|HDRD_METBF RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit D gi|72396272|gb|AAZ70545.1| CoB-CoM heterodisulfide reductase, subunit D [Methanosarcina barkeri str. Fusaro] Length = 409 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 13/110 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLID----------SRDE 209 ++ L CV C C CP+Y + + L P + +R ++ E Sbjct: 15 AVQLMELDACVRCGECVKWCPTYAASGGKPGLAPRDKILRWRQYMNKSYGLKAKLFGPQE 74 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ +D ++ C T C C G+N + I+ L+ + I Sbjct: 75 VSPSELEEFKDD--VHGCTTCGVCATVCEAGINTVEIWEAIRTNLVKKGI 122 >gi|15802792|ref|NP_288819.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 EDL933] gi|15832382|ref|NP_311155.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. Sakai] gi|16130178|ref|NP_416746.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109060|ref|AP_002840.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K-12 substr. W3110] gi|168749649|ref|ZP_02774671.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4113] gi|168754992|ref|ZP_02779999.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4401] gi|168761322|ref|ZP_02786329.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4501] gi|168767866|ref|ZP_02792873.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4486] gi|168773035|ref|ZP_02798042.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4196] gi|168780095|ref|ZP_02805102.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4076] gi|168787151|ref|ZP_02812158.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC869] gi|168798410|ref|ZP_02823417.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC508] gi|170019444|ref|YP_001724398.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli ATCC 8739] gi|170081861|ref|YP_001731181.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K-12 substr. DH10B] gi|188492101|ref|ZP_02999371.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli 53638] gi|195935619|ref|ZP_03081001.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. EC4024] gi|208809644|ref|ZP_03251981.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4206] gi|208813968|ref|ZP_03255297.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4045] gi|208819130|ref|ZP_03259450.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4042] gi|209397793|ref|YP_002271652.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4115] gi|238901416|ref|YP_002927212.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli BW2952] gi|254794136|ref|YP_003078973.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. TW14359] gi|256022075|ref|ZP_05435940.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia sp. 4_1_40B] gi|261223301|ref|ZP_05937582.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259149|ref|ZP_05951682.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli O157:H7 str. FRIK966] gi|300948942|ref|ZP_07163003.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 116-1] gi|300958930|ref|ZP_07171033.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 175-1] gi|301026873|ref|ZP_07190272.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 196-1] gi|301647666|ref|ZP_07247460.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 146-1] gi|307138905|ref|ZP_07498261.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli H736] gi|71159381|sp|P0A997|GLPC_ECO57 RecName: Full=Anaerobic glycerol-3-phosphate dehydrogenase subunit C; Short=G-3-P dehydrogenase gi|71159382|sp|P0A996|GLPC_ECOLI RecName: Full=Anaerobic glycerol-3-phosphate dehydrogenase subunit C; Short=G-3-P dehydrogenase gi|12516583|gb|AAG57374.1|AE005456_11 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EDL933] gi|1788576|gb|AAC75303.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K-12 substr. MG1655] gi|1799590|dbj|BAA16062.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K12 substr. W3110] gi|13362598|dbj|BAB36551.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli O157:H7 str. Sakai] gi|169754372|gb|ACA77071.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli ATCC 8739] gi|169889696|gb|ACB03403.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli str. K-12 substr. DH10B] gi|187771061|gb|EDU34905.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4196] gi|188016084|gb|EDU54206.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4113] gi|188487300|gb|EDU62403.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli 53638] gi|189002028|gb|EDU71014.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4076] gi|189357681|gb|EDU76100.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4401] gi|189362795|gb|EDU81214.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4486] gi|189368256|gb|EDU86672.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4501] gi|189372869|gb|EDU91285.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC869] gi|189378945|gb|EDU97361.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC508] gi|208729445|gb|EDZ79046.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4206] gi|208735245|gb|EDZ83932.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4045] gi|208739253|gb|EDZ86935.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4042] gi|209159193|gb|ACI36626.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli O157:H7 str. EC4115] gi|209765458|gb|ACI81041.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli] gi|209765460|gb|ACI81042.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli] gi|209765462|gb|ACI81043.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli] gi|209765466|gb|ACI81045.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli] gi|238863562|gb|ACR65560.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli BW2952] gi|254593536|gb|ACT72897.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli O157:H7 str. TW14359] gi|260448665|gb|ACX39087.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli DH1] gi|299879533|gb|EFI87744.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 196-1] gi|300314433|gb|EFJ64217.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 175-1] gi|300451596|gb|EFK15216.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 116-1] gi|301074196|gb|EFK89002.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 146-1] gi|309702553|emb|CBJ01880.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli ETEC H10407] gi|315136875|dbj|BAJ44034.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli DH1] gi|315615504|gb|EFU96136.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 3431] gi|320192134|gb|EFW66779.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. EC1212] gi|320641071|gb|EFX10550.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. G5101] gi|320646460|gb|EFX15379.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H- str. 493-89] gi|320651557|gb|EFX19937.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H- str. H 2687] gi|320667828|gb|EFX34736.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. LSU-61] gi|323936640|gb|EGB32926.1| glycerol-3-phosphate dehydrogenase [Escherichia coli E1520] gi|323941062|gb|EGB37249.1| glycerol-3-phosphate dehydrogenase [Escherichia coli E482] gi|326339592|gb|EGD63403.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. 1125] gi|326344054|gb|EGD67815.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O157:H7 str. 1044] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|254786926|ref|YP_003074355.1| electron transport complex protein RnfC [Teredinibacter turnerae T7901] gi|237686186|gb|ACR13450.1| electron transport complex, RnfABCDGE type, C subunit [Teredinibacter turnerae T7901] Length = 747 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 18/90 (20%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 SHE+ C+ C C+ +CP+ ++L Q W S D + + Sbjct: 358 PSHEEMPAQPPAQACIRCGMCAQACPA-----------SLLPQQMFWYAQSEDFDKLK-- 404 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C+ CP + + Sbjct: 405 -----EHNLFDCIECGACSYVCPSSIPLVQ 429 >gi|212704339|ref|ZP_03312467.1| hypothetical protein DESPIG_02394 [Desulfovibrio piger ATCC 29098] gi|212672301|gb|EEB32784.1| hypothetical protein DESPIG_02394 [Desulfovibrio piger ATCC 29098] Length = 430 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 16/90 (17%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP + L A+ + D + + D L Sbjct: 21 CMKCGMCQAVCPMFGATMMEADVARGKLALVDNLAHEMIADP---------EAVADK--L 69 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC +C +CP G+ + + ++ Sbjct: 70 GRCLLCGSCEANCPSGVKIMDIFMEAREIV 99 >gi|90577237|ref|ZP_01233048.1| Fe-S oxidoreductase [Vibrio angustum S14] gi|90440323|gb|EAS65503.1| Fe-S oxidoreductase [Vibrio angustum S14] Length = 941 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 14/146 (9%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + + + F + + + + L+ + + + +CV Sbjct: 490 IELEWGADGYQLMQNIKRIFDKRGILNPGVIINEDKESHIKNLKGMPEA--DELIDKCVE 547 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPF---RLYR 226 C C CPS + L P +R + SR E RL +E + L Sbjct: 548 CGFCEPVCPSRNLS----LTPRQRNTVFREI--SRLRKTNEDPSRLAQMEKTYRYYGLDT 601 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C C CP G+N + K++ Sbjct: 602 CAATGLCADRCPVGINTGDLVRKLRQ 627 >gi|15605900|ref|NP_213277.1| heterodisulfide reductase subunit C [Aquifex aeolicus VF5] gi|2983066|gb|AAC06673.1| heterodisulfide reductase subunit C [Aquifex aeolicus VF5] Length = 253 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 61/155 (39%), Gaps = 26/155 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED-----------RQKIDGL 167 M++ + +V+ + R + + L ++ ED + + + Sbjct: 1 MAIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTI 60 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C+ C+ SCP + + +RY P + R + +R D + +RC Sbjct: 61 LQCYQCSYCTASCPVHNYWDERY-NPRHFIYLARL---GLVDELQKRADVM------WRC 110 Query: 228 HTIMNCTQSCPKGL---NPAKAIAKI--KMMLLDR 257 + CT CPKG+ KAI K+ K L++ Sbjct: 111 VSCHKCTHRCPKGVLVEEVLKAILKVLSKRGLIEE 145 >gi|110642450|ref|YP_670180.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 536] gi|117624436|ref|YP_853349.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli APEC O1] gi|161486173|ref|NP_754670.2| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli CFT073] gi|162138403|ref|YP_541521.2| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli UTI89] gi|191169957|ref|ZP_03031511.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli F11] gi|215487459|ref|YP_002329890.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O127:H6 str. E2348/69] gi|218559159|ref|YP_002392072.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli S88] gi|218690405|ref|YP_002398617.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli ED1a] gi|218700715|ref|YP_002408344.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli IAI39] gi|227887301|ref|ZP_04005106.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 83972] gi|300981208|ref|ZP_07175417.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 200-1] gi|300983304|ref|ZP_07176518.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 45-1] gi|301024019|ref|ZP_07187735.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 69-1] gi|301048996|ref|ZP_07195983.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 185-1] gi|306814645|ref|ZP_07448807.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli NC101] gi|312967543|ref|ZP_07781758.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 2362-75] gi|331658323|ref|ZP_08359285.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA206] gi|331663754|ref|ZP_08364664.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA143] gi|331683918|ref|ZP_08384514.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H299] gi|110344042|gb|ABG70279.1| glycerol-3-phosphate dehydrogenase [Escherichia coli 536] gi|115513560|gb|ABJ01635.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli APEC O1] gi|190909473|gb|EDV69058.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli F11] gi|215265531|emb|CAS09934.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli O127:H6 str. E2348/69] gi|218365928|emb|CAR03670.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli S88] gi|218370701|emb|CAR18512.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli IAI39] gi|218427969|emb|CAR08740.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli ED1a] gi|222034003|emb|CAP76744.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli LF82] gi|227835651|gb|EEJ46117.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 83972] gi|294493417|gb|ADE92173.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli IHE3034] gi|300299188|gb|EFJ55573.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 185-1] gi|300307658|gb|EFJ62178.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 200-1] gi|300396751|gb|EFJ80289.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 69-1] gi|300408562|gb|EFJ92100.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 45-1] gi|305852039|gb|EFM52491.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli NC101] gi|307554308|gb|ADN47083.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli ABU 83972] gi|307626220|gb|ADN70524.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli UM146] gi|312287740|gb|EFR15645.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 2362-75] gi|312946863|gb|ADR27690.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O83:H1 str. NRG 857C] gi|315285892|gb|EFU45330.1| glycerol-3-phosphate dehydrogenase [NAD(P)+] C subunit [Escherichia coli MS 110-3] gi|315292220|gb|EFU51572.1| glycerol-3-phosphate dehydrogenase [NAD(P)+] C subunit [Escherichia coli MS 153-1] gi|315298100|gb|EFU57369.1| glycerol-3-phosphate dehydrogenase [NAD(P)+] C subunit [Escherichia coli MS 16-3] gi|320196111|gb|EFW70735.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli WV_060327] gi|323952037|gb|EGB47911.1| glycerol-3-phosphate dehydrogenase [Escherichia coli H252] gi|323956011|gb|EGB51764.1| glycerol-3-phosphate dehydrogenase [Escherichia coli H263] gi|324006649|gb|EGB75868.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 57-2] gi|324013159|gb|EGB82378.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 60-1] gi|331056571|gb|EGI28580.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA206] gi|331059553|gb|EGI31530.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA143] gi|331078870|gb|EGI50072.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H299] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|254195369|ref|ZP_04901797.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei S13] gi|169652116|gb|EDS84809.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei S13] Length = 477 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|333016753|gb|EGK36081.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri K-227] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|310641859|ref|YP_003946617.1| iron-sulfur cluster binding protein [Paenibacillus polymyxa SC2] gi|309246809|gb|ADO56376.1| Iron-sulfur cluster binding protein [Paenibacillus polymyxa SC2] Length = 506 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 16/100 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 L C+ C C +CP Y Y GP + + E +++ Sbjct: 310 FQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAV------LTPALHGNIEEWNDI 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C ++CP + + ++ ++ Sbjct: 364 ASASSL-----CGACYEACPVKIPLHDMLVYLRRRKVEAG 398 >gi|308068925|ref|YP_003870530.1| electron transport protein ykgF [Paenibacillus polymyxa E681] gi|305858204|gb|ADM69992.1| Putative electron transport protein ykgF [Paenibacillus polymyxa E681] Length = 506 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 16/100 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 L C+ C C +CP Y Y GP + + E +++ Sbjct: 310 FQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAV------LTPALHGNIEEWNDI 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C ++CP + + ++ ++ Sbjct: 364 ASASSL-----CGACYEACPVKIPLHDMLVYLRRRKVEAG 398 >gi|237721525|ref|ZP_04552006.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449321|gb|EEO55112.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 461 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 18/133 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSALLSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + + + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIG-----INLGMAHAPEKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMMLL 255 A+ I K + L Sbjct: 368 LAEQIYKWRQDLA 380 >gi|110806212|ref|YP_689732.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella flexneri 5 str. 8401] gi|110615760|gb|ABF04427.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella flexneri 5 str. 8401] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|30063677|ref|NP_837848.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella flexneri 2a str. 2457T] gi|30041932|gb|AAP17658.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella flexneri 2a str. 2457T] gi|281601688|gb|ADA74672.1| Sn-glycerol-3-phosphate dehydrogenase (Anaerobic), K-small subunit [Shigella flexneri 2002017] gi|313651068|gb|EFS15467.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri 2a str. 2457T] gi|332754893|gb|EGJ85258.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri 4343-70] gi|332755294|gb|EGJ85658.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri K-671] gi|332756246|gb|EGJ86597.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri 2747-71] gi|332766065|gb|EGJ96275.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri 2930-71] gi|333001391|gb|EGK20959.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri VA-6] gi|333002101|gb|EGK21667.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri K-218] gi|333016440|gb|EGK35771.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri K-304] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|291283488|ref|YP_003500306.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O55:H7 str. CB9615] gi|209765464|gb|ACI81044.1| anaerobic sn-glycerol-3-phosphate dehydrogenase K-small subunit [Escherichia coli] gi|290763361|gb|ADD57322.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O55:H7 str. CB9615] gi|320663010|gb|EFX30327.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O55:H7 str. USDA 5905] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|82544513|ref|YP_408460.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella boydii Sb227] gi|157161727|ref|YP_001459045.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli HS] gi|187732352|ref|YP_001881074.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella boydii CDC 3083-94] gi|194436139|ref|ZP_03068241.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli 101-1] gi|253772834|ref|YP_003035665.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162254|ref|YP_003045362.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli B str. REL606] gi|297519319|ref|ZP_06937705.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli OP50] gi|300931408|ref|ZP_07146737.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 187-1] gi|312973501|ref|ZP_07787673.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 1827-70] gi|81245924|gb|ABB66632.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella boydii Sb227] gi|157067407|gb|ABV06662.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli HS] gi|187429344|gb|ACD08618.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella boydii CDC 3083-94] gi|194424867|gb|EDX40852.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli 101-1] gi|242377877|emb|CAQ32645.1| glycerol-3-phosphate dehydrogenase (anaerobic), small subunit, subunit of glycerol-3-phosphate-dehydrogenase, anaerobic [Escherichia coli BL21(DE3)] gi|253323878|gb|ACT28480.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974155|gb|ACT39826.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli B str. REL606] gi|253978322|gb|ACT43992.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli BL21(DE3)] gi|300460778|gb|EFK24271.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 187-1] gi|310332096|gb|EFP99331.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 1827-70] gi|320184875|gb|EFW59663.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Shigella flexneri CDC 796-83] gi|323961549|gb|EGB57157.1| glycerol-3-phosphate dehydrogenase [Escherichia coli H489] gi|323973053|gb|EGB68247.1| glycerol-3-phosphate dehydrogenase [Escherichia coli TA007] gi|332094124|gb|EGI99176.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella boydii 3594-74] gi|332344024|gb|AEE57358.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit GlpC [Escherichia coli UMNK88] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|89896102|ref|YP_519589.1| hypothetical protein DSY3356 [Desulfitobacterium hafniense Y51] gi|219670519|ref|YP_002460954.1| hypothetical protein Dhaf_4517 [Desulfitobacterium hafniense DCB-2] gi|89335550|dbj|BAE85145.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540779|gb|ACL22518.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 434 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L +C+ C C CP Y N + + ++ E R Sbjct: 11 QDELNKCMKCGNCQEVCPIYKENRREVSVARGKISLVQMVMKGEVEMTE------GIADR 64 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C T M C + CP G+ K I + + +K Sbjct: 65 LSLCTTCMACNKICPCGVRFDKIILAARAEAVRKK 99 >gi|288560467|ref|YP_003423953.1| 4Fe-4S binding domain-containing protein [Methanobrevibacter ruminantium M1] gi|288543177|gb|ADC47061.1| 4Fe-4S binding domain-containing protein [Methanobrevibacter ruminantium M1] Length = 409 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 16/88 (18%) Query: 169 ECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C SCP Y ++ YLG + R+L D + + Sbjct: 306 WCIGCGNCIVSCPVYNIIGNKFGYSSYLGGRGIA-LSRYLKD----------NEVSVDSG 354 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 LY C CT++CP + I ++ Sbjct: 355 LYMCTLCGMCTENCPVLTPTYEIIENLR 382 >gi|119897457|ref|YP_932670.1| iron-sulfur bindinding oxidase [Azoarcus sp. BH72] gi|119669870|emb|CAL93783.1| conserved hypothetical iron-sulfur bindinding oxidase [Azoarcus sp. BH72] Length = 925 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 36/111 (32%), Gaps = 9/111 (8%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + K L Q + C+ C C CPS+ L P + +R L Sbjct: 514 NDDAEAHLKHLKPMPAAGQLYAAVDRCIECGFCEPQCPSHGLT----LSPRQRIVGWREL 569 Query: 204 IDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 SR E GE L + L C C +CP G+ ++ Sbjct: 570 --SRREAAGEAPGQLGEDYLYMGLDTCAACGLCATACPVGIETGALTRAVR 618 >gi|330447803|ref|ZP_08311451.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491994|dbj|GAA05948.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 941 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 9/132 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+ ++ + + R I ++ + + + +CV C C CPS Sbjct: 501 LMQNIKRIFDK-RGILNPGVIINEDKESHIKNLKGMPAADELIDKCVECGFCEPVCPSRN 559 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNLEDPF---RLYRCHTIMNCTQSCPKG 240 + L P +R + R+ + RL +E + L C C CP G Sbjct: 560 LS----LTPRQRNTVFREISRLRETNEDPARLAQMEKNYRYYGLDTCAATGLCADRCPVG 615 Query: 241 LNPAKAIAKIKM 252 +N + K++ Sbjct: 616 INTGDLVRKLRQ 627 >gi|325968273|ref|YP_004244465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] gi|323707476|gb|ADY00963.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 447 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R + L CV C C T CP+Y + P + + LI S + + + Sbjct: 44 NRNLVISLGLCVGCGACLTVCPAYLATRNIKNSPIGRITLAKLLIRSYFDSK-----LIN 98 Query: 220 DPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + ++C T C CP G++ A I+ +L + Sbjct: 99 EAYTYFWQCLTCRRCAWVCPFGVDIADISRTIRSLLYE 136 >gi|157144807|ref|YP_001452126.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Citrobacter koseri ATCC BAA-895] gi|157082012|gb|ABV11690.1| hypothetical protein CKO_00534 [Citrobacter koseri ATCC BAA-895] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTSFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 DALKYCINCKRCEVACPSDVKIGDIIQRARARY 83 >gi|189423934|ref|YP_001951111.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189420193|gb|ACD94591.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 334 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 42/149 (28%), Gaps = 21/149 (14%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 KD + Q + K L + ED CV C C+ CP+ Sbjct: 183 KDRFAERDGTQPQELATPATQPFDLKKIKAWLDKHFEDAAWDSIATRCVGCGACAFVCPA 242 Query: 183 YWWNSDRYLGPAILLQAYRWL--------------IDSRDEFQGERLDNLEDPFRLYR-- 226 G + ++ + RD + + F+ Y Sbjct: 243 CHCFDIVDEGSEKAGKRRKFWDACGFSKFTNHASGHNPRDLQPKRYRNRIMHKFKYYDDK 302 Query: 227 -----CHTIMNCTQSCPKGLNPAKAIAKI 250 C C + CP G++ A + +I Sbjct: 303 FGQTLCTGCGRCIRICPVGIDIAGVLEEI 331 >gi|320657309|gb|EFX25111.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|308050428|ref|YP_003913994.1| hypothetical protein Fbal_2718 [Ferrimonas balearica DSM 9799] gi|307632618|gb|ADN76920.1| protein of unknown function DUF162 [Ferrimonas balearica DSM 9799] Length = 463 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 10/91 (10%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 Y+C+ C C +CP Y +S I + DE + Sbjct: 306 EAYKCIRCGGCLNTCPVYRRSSGYSYNALIPGPIGIAVSAGNDETHS----------MAW 355 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C +CT+ CP + + I + + Sbjct: 356 ACTLCGSCTKVCPTKVPLDQIIHHWRKIQAK 386 >gi|300936802|ref|ZP_07151694.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 21-1] gi|300458087|gb|EFK21580.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 21-1] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|74312765|ref|YP_311184.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella sonnei Ss046] gi|73856242|gb|AAZ88949.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella sonnei Ss046] gi|323168592|gb|EFZ54272.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella sonnei 53G] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|157156419|ref|YP_001463593.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli E24377A] gi|191166485|ref|ZP_03028315.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli B7A] gi|193062293|ref|ZP_03043388.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli E22] gi|193068235|ref|ZP_03049199.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli E110019] gi|194427104|ref|ZP_03059655.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli B171] gi|209919696|ref|YP_002293780.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli SE11] gi|218695849|ref|YP_002403516.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli 55989] gi|256017595|ref|ZP_05431460.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella sp. D9] gi|260844839|ref|YP_003222617.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O103:H2 str. 12009] gi|260856293|ref|YP_003230184.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O26:H11 str. 11368] gi|260868973|ref|YP_003235375.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O111:H- str. 11128] gi|300818155|ref|ZP_07098367.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 107-1] gi|300822118|ref|ZP_07102260.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 119-7] gi|300903629|ref|ZP_07121547.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 84-1] gi|300918594|ref|ZP_07135182.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 115-1] gi|300926349|ref|ZP_07142149.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 182-1] gi|301303295|ref|ZP_07209420.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 124-1] gi|301328734|ref|ZP_07221787.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 78-1] gi|307311191|ref|ZP_07590835.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli W] gi|309793124|ref|ZP_07687552.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 145-7] gi|331668947|ref|ZP_08369795.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA271] gi|157078449|gb|ABV18157.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli E24377A] gi|190903445|gb|EDV63164.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli B7A] gi|192931959|gb|EDV84558.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli E22] gi|192958514|gb|EDV88953.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli E110019] gi|194414725|gb|EDX30996.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Escherichia coli B171] gi|209912955|dbj|BAG78029.1| glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli SE11] gi|218352581|emb|CAU98361.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli 55989] gi|257754942|dbj|BAI26444.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O26:H11 str. 11368] gi|257759986|dbj|BAI31483.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O103:H2 str. 12009] gi|257765329|dbj|BAI36824.1| sn-glycerol-3-phosphate dehydrogenase, anaerobic, small subunit [Escherichia coli O111:H- str. 11128] gi|300404365|gb|EFJ87903.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 84-1] gi|300414246|gb|EFJ97556.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 115-1] gi|300417626|gb|EFK00937.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 182-1] gi|300525248|gb|EFK46317.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 119-7] gi|300529299|gb|EFK50361.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 107-1] gi|300841469|gb|EFK69229.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 124-1] gi|300844882|gb|EFK72642.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 78-1] gi|306908697|gb|EFN39194.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli W] gi|308123410|gb|EFO60672.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 145-7] gi|315061542|gb|ADT75869.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Escherichia coli W] gi|315255180|gb|EFU35148.1| glycerol-3-phosphate dehydrogenase [NAD(P)+], anaerobic, C subunit [Escherichia coli MS 85-1] gi|320199837|gb|EFW74426.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli EC4100B] gi|323156521|gb|EFZ42675.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli EPECa14] gi|323161655|gb|EFZ47539.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli E128010] gi|323171923|gb|EFZ57567.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli LT-68] gi|323176829|gb|EFZ62419.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 1180] gi|323184137|gb|EFZ69514.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli 1357] gi|323377877|gb|ADX50145.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli KO11] gi|323944760|gb|EGB40826.1| glycerol-3-phosphate dehydrogenase [Escherichia coli H120] gi|324020916|gb|EGB90135.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Escherichia coli MS 117-3] gi|324117873|gb|EGC11772.1| glycerol-3-phosphate dehydrogenase [Escherichia coli E1167] gi|331064141|gb|EGI36052.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA271] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|157736308|ref|YP_001488991.1| iron-sulfur cluster binding protein, putative [Arcobacter butzleri RM4018] gi|157698162|gb|ABV66322.1| iron-sulfur cluster binding protein, putative [Arcobacter butzleri RM4018] Length = 459 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 21/139 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + SHF+ + + V K ++ L C+ C C +CP Y Sbjct: 265 ITSYTSHFHGSVEGGKMHVIIVDNKRSQFLSSQK-----NKKALNCIRCGACMNTCPVYR 319 Query: 185 WNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKG 240 + Y+ P + E L + C +CT CP Sbjct: 320 RSGGHSYEYVIPGPIGSILGSARHP------------EAHNSLPFACTLCGSCTNVCPVK 367 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + ++ L + + Sbjct: 368 IDLDSQLYSLRQDLGEADL 386 >gi|292655690|ref|YP_003535587.1| glycerol-3-phosphate dehydrogenase subunit C [Haloferax volcanii DS2] gi|291372813|gb|ADE05040.1| glycerol-3-phosphate dehydrogenase subunit C [Haloferax volcanii DS2] Length = 436 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 10/100 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D G C C C SCP D + GP ++++ +R ++ Sbjct: 32 DMDLRPGADNCYKCTACDVSCPVAEV-DDEFPGPK---------FQGPEQWRLKRKEDEA 81 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C +CP G+ ++ + +D ++ Sbjct: 82 VDDSIMSCSNCMRCDDACPSGVPLSQMHNTARGEYVDEQM 121 >gi|332701499|ref|ZP_08421587.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio africanus str. Walvis Bay] gi|332551648|gb|EGJ48692.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio africanus str. Walvis Bay] Length = 417 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP P + +W + D L + ++ Sbjct: 23 LKKCYQCATCSVACPLAPA---ENPYPRKEMVWAQWGL----------KDRLVNDIDIWL 69 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH C+ CP+G P +A ++ M Sbjct: 70 CHNCGTCSDLCPRGAKPGDLMAAMRNMAYR 99 >gi|325290143|ref|YP_004266324.1| Lactate utilization protein B/C [Syntrophobotulus glycolicus DSM 8271] gi|324965544|gb|ADY56323.1| Lactate utilization protein B/C [Syntrophobotulus glycolicus DSM 8271] Length = 399 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 11/89 (12%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP + + Y + + + +D + L Y C Sbjct: 319 CLRCGGCMYECPVFQVTAGHYGRTYLSGIGSIWTAFVDGGPDVAAPML---------YTC 369 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP ++ K + +++ +++ Sbjct: 370 LRCGRCVEQCPMKIDVPKMVGELRSKVVE 398 >gi|281179333|dbj|BAI55663.1| glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli SE15] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|256830964|ref|YP_003159692.1| heterodisulfide reductase, transmembrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256580140|gb|ACU91276.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfomicrobium baculatum DSM 4028] Length = 408 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L +C CA CS +CP +D ++ A L D L + ++ Sbjct: 24 DLKKCYQCATCSVACPM--SPADNPYPRKEMVWAQWGLKD-----------KLVNDIDIW 70 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH C++ CP+G P +A ++ M + Sbjct: 71 LCHNCGTCSELCPRGAKPGDLLAALRNMTYRK 102 >gi|332703000|ref|ZP_08423088.1| putative heterodisulfide reductase, C subunit [Desulfovibrio africanus str. Walvis Bay] gi|332553149|gb|EGJ50193.1| putative heterodisulfide reductase, C subunit [Desulfovibrio africanus str. Walvis Bay] Length = 184 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 13/103 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ + + + C+ C C SCP+ + Q +R L+ ++ Sbjct: 11 REAPALAEVREMVMGCMQCGTCGASCPNAFAMD------YTPRQLWRLLLLGQE------ 58 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + +Y C + CT CP+GL +A+ +K + +R Sbjct: 59 -QEVLGSKTIYLCSSCYTCTVRCPRGLPLTEAMHALKRLAWER 100 >gi|218554806|ref|YP_002387719.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli IAI1] gi|218361574|emb|CAQ99165.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit [Escherichia coli IAI1] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|145591146|ref|YP_001153148.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282914|gb|ABP50496.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 472 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 4/140 (2%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTS 179 K L S H+ I L + + L++ R K + CV CA C + Sbjct: 16 FKPLKATDSLVTKLHKKIGMELPSDKYYYIETRLRNEYLRNKNIRIAVETCVHCAACIDA 75 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+Y D P + R +I + + ++ L + ++C T C CP Sbjct: 76 CPTYLTTKDIRNSPVGRAEMLRNIIKRKQKVDDSTIELLYTYY--WQCLTCRRCGYICPF 133 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 G++ A ++ +L + I Sbjct: 134 GIDQADITRVVRGVLYEAGI 153 >gi|71907394|ref|YP_284981.1| Iron-sulfur cluster binding protein [Dechloromonas aromatica RCB] gi|71847015|gb|AAZ46511.1| Iron-sulfur cluster binding protein [Dechloromonas aromatica RCB] Length = 480 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 42/271 (15%) Query: 2 VEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLD 61 V++ K S + I L + P +D Y ++D + + Sbjct: 151 VQLAHEKPSHIIMPAIHKTKQEIAQL--F--------ADNVPGVD-YTDNVDALIQIGRN 199 Query: 62 GLLYIKNKID---PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 L + D + + +C T A + V L H Sbjct: 200 VLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTAPPVHIAITGIEKIVEKLEH 259 Query: 119 MSVIKDLVV------DMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGL 167 + + L+ ++S +++ S + P +++ Sbjct: 260 VPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHLVLLDNGRSQAYADEQLRKT 319 Query: 168 YECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C CP Y Y GP + + L E + Sbjct: 320 LQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHML-------GLEATATMATAS 372 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C + CP + + + +++ Sbjct: 373 SL-----CGACGEVCPVKIPIPELLMRLREE 398 >gi|302538062|ref|ZP_07290404.1| iron-sulfur cluster-binding protein [Streptomyces sp. C] gi|302446957|gb|EFL18773.1| iron-sulfur cluster-binding protein [Streptomyces sp. C] Length = 492 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 27/97 (27%), Gaps = 15/97 (15%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + R Sbjct: 316 RQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAV----LSPQLRGTAGA------V 365 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y C + CP ++ + + ++ ++ Sbjct: 366 DATLPYASTLCGACYEVCPVAIDIPEILVHLRERVVQ 402 >gi|224370822|ref|YP_002604986.1| HdrD4 [Desulfobacterium autotrophicum HRM2] gi|223693539|gb|ACN16822.1| HdrD4 [Desulfobacterium autotrophicum HRM2] Length = 439 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C++ CP+ P L+ +D + + ++ Sbjct: 29 NLNACLTCGACASGCPATGLRGMD---PRKFLRMAALGMD----------EEILSSEWIW 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP +N + + + + K Sbjct: 76 MCTQCQRCIYVCPMQINIPQLVYNARASIPREK 108 >gi|170767350|ref|ZP_02901803.1| sn-glycerol-3-phosphate dehydrogenase, K-small subunit [Escherichia albertii TW07627] gi|170123684|gb|EDS92615.1| sn-glycerol-3-phosphate dehydrogenase, K-small subunit [Escherichia albertii TW07627] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|269218294|ref|ZP_06162148.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212422|gb|EEZ78762.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 517 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + + L E D + Sbjct: 347 KCIRCAACMNICPVYRHTGGHAYGSVYPGPIGAVLTPQLL---------EAYDRSDPASS 397 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L + C C CP ++ + ++ ++ Sbjct: 398 LPFACSLCGACGDVCPVKIDLPNILVHLRHKSVEA 432 >gi|16081646|ref|NP_394013.1| iron-sulfur protein [Thermoplasma acidophilum DSM 1728] gi|10639706|emb|CAC11678.1| conserved iron-sulfur protein [Thermoplasma acidophilum] Length = 373 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 26/89 (29%), Gaps = 22/89 (24%) Query: 170 CVMCACCSTSCPSYWWNSDR-------YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C SCP Y Y GP ++ Y D Sbjct: 293 CIKCGRCYFSCPIYRVLGKEWVSTKSPYNGPTGVMWNYITNKDPWPAS------------ 340 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP +N + I IK Sbjct: 341 ---YCVHSGGCKEVCPMRINIPEVIKYIK 366 >gi|75759067|ref|ZP_00739174.1| Iron-sulphur-binding reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493466|gb|EAO56575.1| Iron-sulphur-binding reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 363 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 38/132 (28%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-------------------------------WWNSDR 189 + ++ LY CV C C+ CP+ W Sbjct: 194 QNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVA 253 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLD-------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 + A + E L ++ ++ C T NC CP Sbjct: 254 FNNTQGNQLAMMAAGKGQQESAATTLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNE 313 Query: 243 PAKAIAKIKMML 254 I ++ L Sbjct: 314 HVDKIIDLRRYL 325 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 R + L D LY C CT CP K L+P I K++ L D+ Sbjct: 193 RQNQLID---LYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKG 239 >gi|330508940|ref|YP_004385368.1| CoB-CoM heterodisulfide reductase subunit C [Methanosaeta concilii GP-6] gi|328929748|gb|AEB69550.1| CoB-CoM heterodisulfide reductase subunit C [Methanosaeta concilii GP-6] Length = 176 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + + C+ C CS SCP+ R + + + E L N Sbjct: 15 RLAGEEVRTCIQCGTCSASCPTAHLMK---------PSIRRLVKLCLEGRREEALHN--- 62 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ C + + CT CP+G+ P ++ +K + KI Sbjct: 63 -ETLWLCTSCLLCTVRCPRGIRPKMVVSALKELADREKI 100 >gi|303247924|ref|ZP_07334191.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio fructosovorans JJ] gi|302490648|gb|EFL50551.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio fructosovorans JJ] Length = 399 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 17/92 (18%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C CA CS +CP P + +W + +R + D ++ CH Sbjct: 27 KCYQCATCSVACP---LAPPENPFPRKEMVWAQWGL-------KDRFEGDID---IWLCH 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK----MMLLD 256 C++ CP+G P IA I+ L++ Sbjct: 74 NCQTCSELCPRGARPGDLIAAIRNLTYRDLVE 105 >gi|56480075|ref|NP_708133.2| sn-glycerol-3-phosphate dehydrogenase subunit C [Shigella flexneri 2a str. 301] gi|56383626|gb|AAN43840.2| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Shigella flexneri 2a str. 301] Length = 396 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|282162952|ref|YP_003355337.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanocella paludicola SANAE] gi|282155266|dbj|BAI60354.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanocella paludicola SANAE] Length = 347 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 9/99 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 + I+ + +C C C CP + R L + + + +R Sbjct: 3 QDHIEDIIKCTRCGRCRALCPINEELGWESTNARGRMLLARALAEGEKPSYAMKR----- 57 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C T CT +CP G P + + ++ + Sbjct: 58 ---SFYTCLTCSMCTSTCPSGAKPDDVVEDARREMIAQG 93 >gi|224367564|ref|YP_002601727.1| QmoC [Desulfobacterium autotrophicum HRM2] gi|223690280|gb|ACN13563.1| QmoC [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D L +C CA CS +CP + P + A W + D L Sbjct: 18 EMLGADTLKKCFQCATCSVACPIA---PENSPFPRKEMIAASWGL----------KDKLV 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ CH +C+ CP+G P ++ I+ + Sbjct: 65 SNGDIWLCHECGDCSDLCPRGARPGDVLSAIRYTAIKE 102 >gi|218780902|ref|YP_002432220.1| hypothetical protein Dalk_3062 [Desulfatibacillum alkenivorans AK-01] gi|218762286|gb|ACL04752.1| Putative uncharacterized Fe-S oxidoreductase similar to HrdD (contains HdrC domain) [Desulfatibacillum alkenivorans AK-01] Length = 444 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 13/96 (13%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E L C+ C C++ CP+ P L+ +D + Sbjct: 20 MEILPDGGNLNLCLTCGACASGCPAAGLEGMD---PRKFLRMAALGLD----------EE 66 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + ++ C CT CP ++ A + + + + Sbjct: 67 IAKTNWVWFCSQCQRCTYVCPMNIDIAGLVFEARQL 102 >gi|229010684|ref|ZP_04167882.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides DSM 2048] gi|228750578|gb|EEM00406.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides DSM 2048] Length = 417 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + D L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVEDTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|225181276|ref|ZP_03734721.1| heterodisulfide reductase subunit C-like protein [Dethiobacter alkaliphilus AHT 1] gi|225168056|gb|EEG76862.1| heterodisulfide reductase subunit C-like protein [Dethiobacter alkaliphilus AHT 1] Length = 134 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 13/112 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + C C C+ CP W + P +L+ + + Sbjct: 4 TTDKLNSNLVKDVEEISGQKVSACFQCGKCTGGCPVVWAMD---VFPHQVLRYAQMGL-- 58 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D L L+ C + C CP+G++ K I +++ ++ K Sbjct: 59 --------VDELLHSKTLWICASCQTCDSRCPRGVDIPKVIEALRLTIIREK 102 >gi|150390047|ref|YP_001320096.1| electron transport complex, RnfABCDGE type, C subunit [Alkaliphilus metalliredigens QYMF] gi|149949909|gb|ABR48437.1| electron transport complex, RnfABCDGE type, C subunit [Alkaliphilus metalliredigens QYMF] Length = 442 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + ++ K + +L E + K C+ CA C + CP YL P Sbjct: 332 MMGMAQQGVEVPLTKGSSGVLLFTEQQAKFPERSNCIRCAKCVSVCPV-------YLQPL 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + D+ D + R L+ C +C+ CP + + I K + Sbjct: 385 FISKYS--ENDAMDHAEKYR--ALD-------CIECGSCSYVCPAKIPLLQNIRVAKRSI 433 Query: 255 LDRK 258 D+K Sbjct: 434 ADKK 437 >gi|323698800|ref|ZP_08110712.1| putative heterodisulfide reductase, C subunit [Desulfovibrio sp. ND132] gi|323458732|gb|EGB14597.1| putative heterodisulfide reductase, C subunit [Desulfovibrio desulfuricans ND132] Length = 189 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 13/85 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ SCP++ + P + + ++ + LD + + + C Sbjct: 30 CMQCGTCTASCPNWHAMD---ITPRAMWRMIQFGM----------LDKILESKTFWMCSA 76 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 CT CP+GL A+A +K + Sbjct: 77 CYMCTLRCPRGLKLTSAMAALKRLA 101 >gi|323701346|ref|ZP_08113020.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533605|gb|EGB23470.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] Length = 433 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L +C+ C C CP Y L+ ++ + + R Sbjct: 11 EEELIKCMKCGNCQAVCPIYKETRSESSVARGKLKLAESILKGQIGYTPGIAK------R 64 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C+++CP G+ K I + L +K Sbjct: 65 FDLCLTCQACSENCPCGVKVHKVILAARAELARQK 99 >gi|284166222|ref|YP_003404501.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haloterrigena turkmenica DSM 5511] gi|284015877|gb|ADB61828.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haloterrigena turkmenica DSM 5511] Length = 448 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ ED G C C+ C T+CP D + GP Sbjct: 16 EDEEFEPIQVFPEAEDMDLRPGADNCYKCSTCDTNCPVAEV-DDEFPGPK---------F 65 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++++ +R D+ + + +C M C +CP + ++ + ++ ++ Sbjct: 66 QGPEQWRLKRQDDHDVDDSVMKCSNCMRCDSACPSEVPLSQMHNTARGEYVEEQM 120 >gi|242239185|ref|YP_002987366.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech703] gi|242131242|gb|ACS85544.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech703] Length = 474 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 13/94 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C CP+Y G P + L+ D+F+ Y Sbjct: 311 RCIRCGACMNICPAYRHIGGHGYGSIYPGPIGAVISPLLGGYDDFKDL----------PY 360 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP + +K I + + ++ + I Sbjct: 361 ACSLCSACDSVCPVKIPLSKLILQHRRVMAESGI 394 >gi|327313533|ref|YP_004328970.1| putative iron-sulfur cluster-binding protein [Prevotella denticola F0289] gi|326946388|gb|AEA22273.1| putative iron-sulfur cluster-binding protein [Prevotella denticola F0289] Length = 462 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + R + +++ E +C+ C C +CP Y Sbjct: 265 ATSFTSHFRKPRPGAEMHVILVDNGRSDMIADAE----HWETLKCIRCGACMNTCPVYRR 320 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D R + C ++C CP + Sbjct: 321 SGGYSYSYFIPGPIGVNLGMLKDPRAHSGN-----------VSACSLCLSCDCVCPAKVA 369 Query: 243 PAKAIAKIKMML 254 P I + + L Sbjct: 370 PGSQIYRWRQRL 381 >gi|325854375|ref|ZP_08171574.1| putative iron-sulfur cluster-binding protein [Prevotella denticola CRIS 18C-A] gi|325484169|gb|EGC87103.1| putative iron-sulfur cluster-binding protein [Prevotella denticola CRIS 18C-A] Length = 462 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + R + +++ E +C+ C C +CP Y Sbjct: 265 ATSFTSHFRKPRPGAEMHVILVDNGRSDMIADAE----HWETLKCIRCGACMNTCPVYRR 320 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D R + C ++C CP + Sbjct: 321 SGGYSYSYFIPGPIGVNLGMLKDPRAHSGN-----------VSACSLCLSCDCVCPAKVA 369 Query: 243 PAKAIAKIKMML 254 P I + + L Sbjct: 370 PGSQIYRWRQRL 381 >gi|315635440|ref|ZP_07890706.1| iron-sulfur cluster-binding protein [Arcobacter butzleri JV22] gi|315480198|gb|EFU70865.1| iron-sulfur cluster-binding protein [Arcobacter butzleri JV22] Length = 459 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 21/139 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + SHF+ + + V K ++ L C+ C C +CP Y Sbjct: 265 ITSYTSHFHGSVEGGKMHVIIVDNKRSQFLSSQK-----NKKALNCIRCGACMNTCPVYR 319 Query: 185 WNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKG 240 + Y+ P + E L + C +CT CP Sbjct: 320 RSGGHSYEYVIPGPIGSILGSARHP------------EAHNSLPFACTLCGSCTNVCPVK 367 Query: 241 LNPAKAIAKIKMMLLDRKI 259 ++ + ++ L + Sbjct: 368 IDLDSQLYSLRQDLGKADL 386 >gi|169832025|ref|YP_001718007.1| heterodisulfide reductase subunit C [Candidatus Desulforudis audaxviator MP104C] gi|169638869|gb|ACA60375.1| heterodisulfide reductase subunit C [Candidatus Desulforudis audaxviator MP104C] Length = 195 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + +C+ C C +CP+ L P +A Q + + + Sbjct: 26 YISQCMQCGLCVVTCPARHLMD---LQPRKYFKA----------IQAGDKEKVLKANTPW 72 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CT CP+G+ + +K L D K Sbjct: 73 LCTSCNLCTVRCPRGIPIIDFMHGMKKYLADTK 105 >gi|317010886|gb|ADU84633.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori SouthAfrica7] Length = 429 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|283850440|ref|ZP_06367729.1| protein of unknown function DUF162 [Desulfovibrio sp. FW1012B] gi|283574466|gb|EFC22437.1| protein of unknown function DUF162 [Desulfovibrio sp. FW1012B] Length = 719 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP Y G + + R++ + + Sbjct: 312 RCIRCGACANVCPIYRVVGGHKYGHVYIGAIGLVATYFFHGREKAR----------NLVQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ I ++ + D Sbjct: 362 NCLNCGACKAVCAAGIDLPTLIKEVHARIQDE 393 Score = 36.3 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%) Query: 214 RLDNLEDPF--RLYRCHTIMNCTQSCP 238 RL DP ++ RC C CP Sbjct: 298 RLAMARDPEFKQVLRCIRCGACANVCP 324 >gi|229057024|ref|ZP_04196418.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH603] gi|229132189|ref|ZP_04261046.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BDRD-ST196] gi|228651237|gb|EEL07215.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BDRD-ST196] gi|228720301|gb|EEL71877.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH603] Length = 417 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + D L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVEDTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|161502562|ref|YP_001569674.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863909|gb|ABX20532.1| hypothetical protein SARI_00606 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 396 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|121612415|ref|YP_999800.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167004775|ref|ZP_02270533.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205356453|ref|ZP_03223217.1| putative iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] gi|87248973|gb|EAQ71935.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205345640|gb|EDZ32279.1| putative iron sulfur protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI--------- 345 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 346 ---SPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|332702137|ref|ZP_08422225.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552286|gb|EGJ49330.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 431 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 13/110 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + ++ + E + L C+ C CS+ CP+ + + P L+ Sbjct: 7 PMSDSQSSRFRQLASEMLPRGVNLDMCLSCGLCSSGCPA---SGLERMDPRKFLRMAVLG 63 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +D + L ++ C CT CP ++ + + + Sbjct: 64 MD----------EALTTTPWVWMCTLCRRCTHVCPAKIDIPALVYEARAR 103 >gi|328952459|ref|YP_004369793.1| Heterodisulfide reductase subunit C [Desulfobacca acetoxidans DSM 11109] gi|328452783|gb|AEB08612.1| Heterodisulfide reductase subunit C [Desulfobacca acetoxidans DSM 11109] Length = 382 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS C + D P + +W + D + ++ Sbjct: 25 LKKCFQCATCSVVCNI---SPDDSPYPRKEMIMAQWGL----------KDQIYKDPDIWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH +CT CP+G NP + I ++ ++ Sbjct: 72 CHYCGDCTAYCPRGANPGEVIGAMRQATIE 101 >gi|283955434|ref|ZP_06372932.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283793061|gb|EFC31832.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVISPNIFG--- 351 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+ D C C++ CP + A I K++ Sbjct: 352 -------IDHTGDILNF--CSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|283955519|ref|ZP_06373014.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792980|gb|EFC31754.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVISPNIFG--- 351 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+ D C C++ CP + A I K++ Sbjct: 352 -------IDHTGDILNF--CSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|182413215|ref|YP_001818281.1| hypothetical protein Oter_1396 [Opitutus terrae PB90-1] gi|177840429|gb|ACB74681.1| protein of unknown function DUF162 [Opitutus terrae PB90-1] Length = 465 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 19/169 (11%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 C + + G L +D I + L + + L V +P Sbjct: 228 CHIALVGIEKLVP----RDRDLGIFLNLLARSATAQQLTVYTEFISGPKSPTQPEGPEEM 283 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRW 202 + ++ + + C+ C C CP Y Y GP + + Sbjct: 284 HVIFVDNGRTTVLASECREILRCIRCGACLNVCPVYRQVSGHAYRSVYPGPVGAVLS--- 340 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 G+R L D + C + CP + + +++ Sbjct: 341 -----PLLAGDRFPELADLPKASS--LCGACHEVCPVDIPIPDLLLRLR 382 >gi|149909025|ref|ZP_01897684.1| putative electron transport protein ykgF [Moritella sp. PE36] gi|149808036|gb|EDM67979.1| putative electron transport protein ykgF [Moritella sp. PE36] Length = 505 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 9/100 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ CA C +CP+Y + G L L ED Sbjct: 302 ASEFKDILRCIRCAACVNTCPAYRHIGGQSYGSIYSGPIGAVL--------SPLLGGYED 353 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C C CP + + + K + ++ +KI Sbjct: 354 FQDLPYACSLCQACNDVCPVKIPLSDLLLKHREKMVVQKI 393 >gi|86151216|ref|ZP_01069431.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315123679|ref|YP_004065683.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841563|gb|EAQ58810.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315017401|gb|ADT65494.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVISPNIFG--- 351 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+ D C C++ CP + A I K++ Sbjct: 352 -------IDHTGDILNF--CSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|261340646|ref|ZP_05968504.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Enterobacter cancerogenus ATCC 35316] gi|288317060|gb|EFC55998.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Enterobacter cancerogenus ATCC 35316] Length = 396 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 10/97 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T CP N Y GP D + D Sbjct: 1 MSDSRFESCIKCTVCTTVCPVSGANPR-YPGPKQA---------GPDGERLRLKDAALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I + + +K Sbjct: 51 DALKYCINCKRCEVACPSDVKIGDIIQRARAHYSTQK 87 >gi|298527956|ref|ZP_07015360.1| protein of unknown function DUF162 [Desulfonatronospira thiodismutans ASO3-1] gi|298511608|gb|EFI35510.1| protein of unknown function DUF162 [Desulfonatronospira thiodismutans ASO3-1] Length = 719 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP Y Y+ + + +D+ RL + Sbjct: 312 RCIRCGACANVCPVYRLVGGHKYGYVYIGAIGLVATYFFHGKDKA---RLL-------VQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + C G++ + I I + D Sbjct: 362 NCVNCGACKEICAAGIDLPRLIKDIHARIQDE 393 >gi|57237082|ref|YP_178094.1| iron-sulfur cluster binding protein [Campylobacter jejuni RM1221] gi|57165886|gb|AAW34665.1| iron-sulfur cluster binding protein [Campylobacter jejuni RM1221] gi|315057515|gb|ADT71844.1| Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Campylobacter jejuni subsp. jejuni S3] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVISPNIFG--- 351 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+ D C C++ CP + A I K++ Sbjct: 352 -------IDHTGDILNF--CSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|308272850|emb|CBX29454.1| hypothetical protein N47_J04350 [uncultured Desulfobacterium sp.] Length = 377 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP + + P + A W + R + ++ Sbjct: 25 LKKCFQCATCSVVCPI---SPETKPFPRKEMIAASWGLKDRVVKSAD----------IWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C+ CP+G P + ++ + + Sbjct: 72 CHNCGDCSTKCPRGARPGDVLGALRSIAISE 102 >gi|327310339|ref|YP_004337236.1| hypothetical protein TUZN_0428 [Thermoproteus uzoniensis 768-20] gi|326946818|gb|AEA11924.1| hypothetical protein TUZN_0428 [Thermoproteus uzoniensis 768-20] Length = 383 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 9/105 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLIDSRDEFQGE 213 ++ + C+ C C CP Y + P + WL +R Sbjct: 285 RRAAAKDPVMREALLCIRCVRCGFVCPVYRAVGREFGDPPYVGPVGVMWLAVTRGIEAA- 343 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 P + +C NC + CP +N + I IK L +K Sbjct: 344 ------GPSAV-KCAHAGNCREVCPMKINIPEIIHYIKSSYLSKK 381 >gi|283954542|ref|ZP_06372061.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni 414] gi|283793946|gb|EFC32696.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni 414] Length = 421 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L D E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHDINPDESTSPRGFLDLLSAYKDGNLELNKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|184200093|ref|YP_001854300.1| putative FAD linked oxidase [Kocuria rhizophila DC2201] gi|183580323|dbj|BAG28794.1| putative FAD-linked oxidase [Kocuria rhizophila DC2201] Length = 1004 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 7/110 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + P L + CV C C CPS D L P + R + + Sbjct: 537 TEDPRAYLRDLKTAPPVESEVDRCVECGYCEPVCPS----QDLTLTPRQRIVGRREIAQA 592 Query: 207 R---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D RL D L C C +CP +N + +++ Sbjct: 593 EERGDTALAARLRREYDYAGLQTCAVDGMCVTACPVHINTGDLVRRLRAE 642 >gi|157414388|ref|YP_001481644.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385352|gb|ABV51667.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747032|gb|ADN90302.1| Iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni M1] gi|315932532|gb|EFV11466.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 327] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI--------- 345 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 346 ---SPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|86149699|ref|ZP_01067929.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597734|ref|ZP_01100967.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218561757|ref|YP_002343536.1| putative iron-sulfur protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839967|gb|EAQ57226.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190038|gb|EAQ94014.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359463|emb|CAL34247.1| putative iron-sulfur protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925369|gb|ADC27721.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927756|gb|EFV07083.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 479 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + Sbjct: 295 HNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI--------- 345 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 346 ---SPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|302347845|ref|YP_003815483.1| hypothetical protein ASAC_0044 [Acidilobus saccharovorans 345-15] gi|302328257|gb|ADL18452.1| hypothetical protein ASAC_0044 [Acidilobus saccharovorans 345-15] Length = 400 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 17/90 (18%) Query: 169 ECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP + W Y GP + + + D L L Sbjct: 318 RCIRCGYCQFVCPVWGQVANNWGGSTYGGPMGVNWTA--ITEGVDRGAA--LAML----- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP + + +A +K Sbjct: 369 ---CLGCGRCDVACPVEIPISGILADLKRR 395 >gi|317154721|ref|YP_004122769.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316944972|gb|ADU64023.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio aespoeensis Aspo-2] Length = 423 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 13/97 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D L +C CA CS CP + D P + +W + D L Sbjct: 18 QAVGGDSLKKCYQCATCSVVCP---LSPDDNPYPRKEMVWAQWGL----------KDRLV 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ CH C+ CP+G P ++ ++ M Sbjct: 65 NDIDIWLCHNCGTCSDLCPRGAKPGDLLSALRNMAYR 101 >gi|258405155|ref|YP_003197897.1| hypothetical protein Dret_1031 [Desulfohalobium retbaense DSM 5692] gi|257797382|gb|ACV68319.1| protein of unknown function DUF162 [Desulfohalobium retbaense DSM 5692] Length = 717 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C+ CP Y G + + R+ + + Sbjct: 312 RCVRCGACANVCPVYRMLGGHDYGHVYIGAIGLILTYFFHGREYAK----------NLVQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + C G++ I +I +LD Sbjct: 362 NCINCQACKEVCAAGIDLPSMIKEIHAQILDE 393 >gi|126734057|ref|ZP_01749804.1| formate dehydrogenase, alpha subunit [Roseobacter sp. CCS2] gi|126716923|gb|EBA13787.1| formate dehydrogenase, alpha subunit [Roseobacter sp. CCS2] Length = 922 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 48/178 (26%), Gaps = 34/178 (19%) Query: 81 REGICGSCGMNIDGTNTLAC------------------VKDMKDIKGAIAVYPLPHMSVI 122 +G C +C + IDG TLA K + + + V P V Sbjct: 46 SDGNCRACMVAIDGERTLAASCIREPSEGMVVTTDQPREKQARRMVMELLVADQPAQEVA 105 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D + + P L L C+ C C +C Sbjct: 106 HDRSSHLWDMAETQDVHDSRFPQKEP--DHIPLLDDSHVAMSVNLDACIQCGLCVRACRE 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D ++DP C C Q+CP G Sbjct: 164 VQVND--VIGMAGRGGTAYPVFD------------MDDPMGASSCVACGECVQACPTG 207 >gi|298481569|ref|ZP_06999761.1| iron-sulfur cluster binding protein [Bacteroides sp. D22] gi|298272433|gb|EFI14002.1| iron-sulfur cluster binding protein [Bacteroides sp. D22] Length = 461 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSALLSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + + + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIG-----INLGMAHAPEKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|114321430|ref|YP_743113.1| iron-sulfur cluster binding protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227824|gb|ABI57623.1| iron-sulfur cluster binding protein [Alkalilimnicola ehrlichii MLHE-1] Length = 476 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 7/137 (5%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +D+ S F R +P + +S + + C+ C C CP Sbjct: 267 QDITSYTSLFSGPRRPADPDGPEAYHVVLIDNGRSAMLGDEFREMLRCIRCGACINHCPV 326 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y G ++ E D C C + CP + Sbjct: 327 YGAIGGHAYGWVYPGP-MGSVLTPLTLGLREAKDLPN------ACTLNGRCQEVCPVRIP 379 Query: 243 PAKAIAKIKMMLLDRKI 259 + ++ ++ Sbjct: 380 LPDLLRNLRHRQFQARL 396 >gi|333002613|gb|EGK22173.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Shigella flexneri K-272] Length = 356 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|304315267|ref|YP_003850414.1| formate dehydrogenase, beta subunit [Methanothermobacter marburgensis str. Marburg] gi|302588726|gb|ADL59101.1| formate dehydrogenase, beta subunit [Methanothermobacter marburgensis str. Marburg] Length = 380 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 31/249 (12%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMD--TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + + ++ + Y +PD+ + +D + V+L + + + Y++ + Sbjct: 130 SAREMIETF--YEIDPDDVVSEEIDRGKFIVELRDGSHREI-SIDYLEEEG--------F 178 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVD--------MS 130 R C C + + LAC D I V +I+ Sbjct: 179 GRRENCQRCEIMVPRNADLACGNWGADDGWTFIEVNTERGQEIIEGARSSGYIEAREPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSD 188 IE + +++ K + L Y C+ C C +CP + Sbjct: 239 KMVKIREKIENAMISMARKFQDKYLDEEYPSLDEWDEYWKRCINCFACRDACPVCFCREC 298 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L LL++ D FQG RL ++ + C C CP + A+ Sbjct: 299 E-LEKDYLLESDEKAPDPL-TFQGVRLSHMG-----FSCINCGQCEDVCPMDIPIARIYH 351 Query: 249 KIKMMLLDR 257 +I+ DR Sbjct: 352 RIQKKYRDR 360 >gi|307824996|ref|ZP_07655218.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacter tundripaludum SV96] gi|307734043|gb|EFO04898.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacter tundripaludum SV96] Length = 400 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 6/89 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP+Y + P + + E + +++++ Sbjct: 7 DADLCVKCGLCLPHCPTYNKTQNENESPRGRIALIQAWAGKHLETSKKLVEHID------ 60 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C +C + CP + + I + + Sbjct: 61 NCLLCRSCERVCPAVVPYGRLINDFREQI 89 >gi|293369175|ref|ZP_06615769.1| putative iron-sulfur cluster-binding protein [Bacteroides ovatus SD CMC 3f] gi|299148834|ref|ZP_07041896.1| putative iron-sulfur cluster binding protein [Bacteroides sp. 3_1_23] gi|292635758|gb|EFF54256.1| putative iron-sulfur cluster-binding protein [Bacteroides ovatus SD CMC 3f] gi|298513595|gb|EFI37482.1| putative iron-sulfur cluster binding protein [Bacteroides sp. 3_1_23] Length = 461 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSALLSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + + + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIG-----INLGMAHAPEKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|260893195|ref|YP_003239292.1| heterodisulfide reductase, C subunit [Ammonifex degensii KC4] gi|260865336|gb|ACX52442.1| heterodisulfide reductase, C subunit [Ammonifex degensii KC4] Length = 177 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R + C C C+ CP + + Q R L R E L Sbjct: 10 NRAAGQKITHCYQCGKCTAGCPVAFAMDYK------PHQILRLLQLGRGE-------ELL 56 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L+ C + CT CP ++ A+ I ++ Sbjct: 57 SSRALWVCSSCQTCTTRCPCHIDLARLIDALR 88 >gi|239906636|ref|YP_002953377.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239796502|dbj|BAH75491.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 719 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP Y G + + R++ + + Sbjct: 312 RCIRCGACANVCPIYRLVGGHKYGHVYIGAIGLVATYFFHGREKAK----------NLVQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ I ++ + D Sbjct: 362 NCLNCGACKAVCAAGIDLPTLIKEVHARIQDE 393 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%) Query: 214 RLDNLEDPF--RLYRCHTIMNCTQSCP 238 RL DP ++ RC C CP Sbjct: 298 RLAMARDPEFKQVLRCIRCGACANVCP 324 >gi|257063290|ref|YP_003142962.1| (4Fe-4S) cluster-containing protein [Slackia heliotrinireducens DSM 20476] gi|256790943|gb|ACV21613.1| (4Fe-4S) cluster-containing protein [Slackia heliotrinireducens DSM 20476] Length = 488 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 17/147 (11%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP +V + S + E + + + + + C C Sbjct: 259 LPRSAVGAKMTAYFSVDSGPRKPGEVDGAEEVHIVIMDNGRHTLINTEFEAMLRCCRCGA 318 Query: 176 CSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 C CP Y Y GP ++ E DNL + C Sbjct: 319 CLNICPVYRHITGHGYGSIYPGPMGIVLTAAL----------EGYDNLGGMP--FACSLC 366 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + I + ++ +++ Sbjct: 367 GACAEHCPVEIPLHDLIRQHRINMVEE 393 >gi|149191413|ref|ZP_01869664.1| Fe-S oxidoreductase [Vibrio shilonii AK1] gi|148834762|gb|EDL51748.1| Fe-S oxidoreductase [Vibrio shilonii AK1] Length = 957 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRL 224 C+ C C CPS L P + +R L R + Q L+ + + L Sbjct: 553 DRCIECGFCEPVCPSRTLT----LSPRQRIVLFRELQRRRANGESTQASELEKVFEYQGL 608 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+N + + K++ Sbjct: 609 DTCAATGLCADRCPVGINTGELVKKLR 635 >gi|237715733|ref|ZP_04546214.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408741|ref|ZP_06085287.1| iron-sulfur cluster-binding protein [Bacteroides sp. 2_1_22] gi|294647056|ref|ZP_06724668.1| putative iron-sulfur cluster-binding protein [Bacteroides ovatus SD CC 2a] gi|294807236|ref|ZP_06766050.1| putative iron-sulfur cluster-binding protein [Bacteroides xylanisolvens SD CC 1b] gi|229444442|gb|EEO50233.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353606|gb|EEZ02700.1| iron-sulfur cluster-binding protein [Bacteroides sp. 2_1_22] gi|292637602|gb|EFF56008.1| putative iron-sulfur cluster-binding protein [Bacteroides ovatus SD CC 2a] gi|294445534|gb|EFG14187.1| putative iron-sulfur cluster-binding protein [Bacteroides xylanisolvens SD CC 1b] gi|295087028|emb|CBK68551.1| Uncharacterized conserved protein containing a ferredoxin-like domain [Bacteroides xylanisolvens XB1A] Length = 461 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + LL + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSALLSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + + + DNL C M+C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIG-----INLGMAHAPEKYYDNLS------ACSLCMSCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|229166228|ref|ZP_04293987.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH621] gi|228617173|gb|EEK74239.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH621] Length = 417 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + D L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVEDTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|158521036|ref|YP_001528906.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Desulfococcus oleovorans Hxd3] gi|158509862|gb|ABW66829.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfococcus oleovorans Hxd3] Length = 400 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 26/95 (27%), Gaps = 10/95 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C+ CP Y GP D + Sbjct: 6 NTSFDRCIKCTVCTAYCPVARVTP-LYPGPKYS---------GPDAERMRIKTPFLADSS 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C+ C CP G+ I+ + L ++ Sbjct: 56 LAYCNNCKRCETVCPSGVRITDFISLARSTRLKKR 90 >gi|312963109|ref|ZP_07777594.1| FAD linked oxidase-like protein [Pseudomonas fluorescens WH6] gi|311282620|gb|EFQ61216.1| FAD linked oxidase-like protein [Pseudomonas fluorescens WH6] Length = 936 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVIWRDIQAKKRAGVDTTDLEAAYHYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + K++ Sbjct: 594 CAATGLCAQRCPVGINTGDLVKKLRSR 620 >gi|207093520|ref|ZP_03241307.1| fumarate reductase iron-sulfur subunit [Helicobacter pylori HPKX_438_AG0C1] Length = 66 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 31 RIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 R+ +++P + P Y + + + L I+ DP L+ CR GICGSC Sbjct: 1 RVLKFDPQSAVSKPHFKEYQL-KETPSMTLFIALNLIREHQDPDLSFDFVCRAGICGSCA 59 Query: 90 MNIDGTN 96 M ++G Sbjct: 60 MMVNGRP 66 >gi|167752657|ref|ZP_02424784.1| hypothetical protein ALIPUT_00913 [Alistipes putredinis DSM 17216] gi|167659726|gb|EDS03856.1| hypothetical protein ALIPUT_00913 [Alistipes putredinis DSM 17216] Length = 231 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 10/102 (9%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 K ED + +GL+ C+ C C+ CP+ + + P ++ ++ ++D Sbjct: 1 MGKYFDMLMEDVRMREGLHSCMNCGVCTGVCPAAEFYN---YDPRQIVN----IVQTQD- 52 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + ++ L ++ C M+C CP+G PA I ++ Sbjct: 53 --DDAIEELMRSDVIWYCGECMSCRPRCPRGNTPAYVIQALR 92 >gi|70606165|ref|YP_255035.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sulfolobus acidocaldarius DSM 639] gi|68566813|gb|AAY79742.1| 4Fe-4S binding domain protein [Sulfolobus acidocaldarius DSM 639] Length = 230 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C ++ D GP + R + + L L+D L+R Sbjct: 60 ISACWQCGTCTSGCTMREYDPD--FGPRKFIDLAR-------KGDKQALIQLQD--SLWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I L + Sbjct: 109 CVSCQKCTHRCPKGVMVEEVVHSIHNYFLKHNL 141 >gi|222150423|ref|YP_002559576.1| iron-sulfur cluster binding protein YvfW homolog [Macrococcus caseolyticus JCSC5402] gi|259495067|sp|B9E9G9|LUTB_MACCJ RecName: Full=Lactate utilization protein B gi|222119545|dbj|BAH16880.1| iron-sulfur cluster binding protein YvfW homolog [Macrococcus caseolyticus JCSC5402] Length = 477 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ D ++ Y Sbjct: 312 QCIRCAACVNVCPVYRQTGGHSYGSIYPGPIGAVLSPLLGGYDTYKEL----------PY 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + + ++++ Sbjct: 362 ASTLCGACTEACPVKIPLHDLLLEHRRVIVEE 393 >gi|158521018|ref|YP_001528888.1| heterodisulfide reductase, putative [Desulfococcus oleovorans Hxd3] gi|158509844|gb|ABW66811.1| heterodisulfide reductase, putative [Desulfococcus oleovorans Hxd3] Length = 398 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 13/91 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + L +C CA CS CP + D P + A W + D L + Sbjct: 23 NTLKKCFQCATCSVVCPI---SPDNKPFPRKEMIAASWGL----------KDKLVKDVDI 69 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + CH +C+ CP+G P +A ++ + Sbjct: 70 WLCHQCGDCSTKCPRGAAPGDVLAAVRSYAI 100 >gi|127513933|ref|YP_001095130.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126639228|gb|ABO24871.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 462 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A +D + Sbjct: 310 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAQADDTHSIP 355 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +C+ CP + K I + + Sbjct: 356 WACTLCGSCSYVCPTKVPLDKIIHHHRRLKAKAG 389 >gi|322617038|gb|EFY13944.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617656|gb|EFY14555.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624714|gb|EFY21543.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630263|gb|EFY27033.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634444|gb|EFY31177.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639154|gb|EFY35846.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640151|gb|EFY36817.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645761|gb|EFY42285.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651536|gb|EFY47911.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656097|gb|EFY52396.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659449|gb|EFY55696.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665911|gb|EFY62094.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669851|gb|EFY65992.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673836|gb|EFY69933.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678594|gb|EFY74650.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683610|gb|EFY79624.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687686|gb|EFY83656.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196217|gb|EFZ81374.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198385|gb|EFZ83487.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204177|gb|EFZ89188.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208563|gb|EFZ93502.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212329|gb|EFZ97152.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218264|gb|EGA02974.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222979|gb|EGA07328.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227413|gb|EGA11578.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232259|gb|EGA16362.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235708|gb|EGA19792.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241132|gb|EGA25168.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244874|gb|EGA28876.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249993|gb|EGA33887.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251605|gb|EGA35473.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255466|gb|EGA39229.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263068|gb|EGA46614.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268128|gb|EGA51605.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270779|gb|EGA54217.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|317968529|ref|ZP_07969919.1| Fe-S oxidoreductase [Synechococcus sp. CB0205] Length = 433 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 6/81 (7%) Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C SY + P + + + E C Sbjct: 1 MHCGFCLPTCASYRVLGNEMDSPRGRIHTLKAIDRGELELDATV------ASHFDTCLGC 54 Query: 231 MNCTQSCPKGLNPAKAIAKIK 251 C +CP G+ + I + Sbjct: 55 FACVSACPSGVRYDQLIEATR 75 >gi|251797746|ref|YP_003012477.1| iron-sulfur cluster binding protein [Paenibacillus sp. JDR-2] gi|247545372|gb|ACT02391.1| iron-sulfur cluster binding protein [Paenibacillus sp. JDR-2] Length = 504 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 7/157 (4%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL-LQSHEDR 161 + LP + + L V MS R ++ + Sbjct: 245 IPSWADLEVMATLLPRSATGQKLTVYMSGITGPRRDVDADGPDEMHIIIVDNGRSLQLGD 304 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP Y G L + + E D Sbjct: 305 PEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALQKNVAEWDDIANAS 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++CP + + + ++ L++ Sbjct: 365 ------SLCGACYEACPVKIPLHEMLIYLRRRKLEQG 395 >gi|294672961|ref|YP_003573577.1| iron-sulfur cluster-binding protein [Prevotella ruminicola 23] gi|294473967|gb|ADE83356.1| iron-sulfur cluster-binding protein [Prevotella ruminicola 23] Length = 456 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 14/129 (10%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + F S R P + + +C+ C C +CP Y + Sbjct: 263 TTTFTSHFRKARPTANPMHIVLVDNGRSEWIGNPEHWEALKCIRCGSCMNTCPVYRRSGG 322 Query: 189 ---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 Y P + L D + + + C +C CP +N Sbjct: 323 YSYSYFIPGPIGINLGMLRDPQ-----------KHSGNVSACTLCNSCQTLCPAKVNLGD 371 Query: 246 AIAKIKMML 254 I + L Sbjct: 372 QIYMWRQQL 380 >gi|283786323|ref|YP_003366188.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Citrobacter rodentium ICC168] gi|282949777|emb|CBG89399.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Citrobacter rodentium ICC168] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|198243688|ref|YP_002216355.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938204|gb|ACH75537.1| sn-glycerol-3-phosphate dehydrogenase K-small subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624105|gb|EGE30450.1| sn-glycerol-3-phosphate dehydrogenase K-small subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|187929014|ref|YP_001899501.1| iron-sulfur cluster binding protein [Ralstonia pickettii 12J] gi|187725904|gb|ACD27069.1| iron-sulfur cluster binding protein [Ralstonia pickettii 12J] Length = 469 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 56/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVAIVTNEGNEGMCTIMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A E + C+ C C CP Y Sbjct: 270 SLLTGPRAPGEKDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--------------TLCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + ++ ++R++ Sbjct: 376 LSDLLRTLREKQMEREL 392 >gi|109947405|ref|YP_664633.1| glycerol-3-phosphatedehydrogenase [Helicobacter acinonychis str. Sheeba] gi|109714626|emb|CAJ99634.1| Predicted glycerol-3-phosphatedehydrogenase [Helicobacter acinonychis str. Sheeba] Length = 431 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV CA C C Y + D P L R ++ + LE C Sbjct: 11 DTCVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------C 64 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 65 FLCTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|332703998|ref|ZP_08424086.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332554147|gb|EGJ51191.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 318 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 4/95 (4%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C +CP W+ + + Sbjct: 195 NAYWKREMQRCIRCYACRNACPLCVCRDHCIAQSRDPH----WIGQGDNVGDKWMFQMIH 250 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP G+ K+ + Sbjct: 251 AQHLAGRCTECGECQRACPVGIPLLALKRKLNKEI 285 >gi|303326305|ref|ZP_07356748.1| putative hydrogenase, iron-sulfur cluster-binding subunit [Desulfovibrio sp. 3_1_syn3] gi|302864221|gb|EFL87152.1| putative hydrogenase, iron-sulfur cluster-binding subunit [Desulfovibrio sp. 3_1_syn3] Length = 482 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 25/97 (25%), Gaps = 8/97 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP W+ + + Sbjct: 358 AFWRGQMERCLRCYACRNACPMCVCRDFCVSDSRDPH----WMSQEDSTREKLFFQTIHA 413 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP G+ I ++ + Sbjct: 414 LHLAGRCTGCGECQRACPVGIP----ILALRQQIARA 446 >gi|332884019|gb|EGK04299.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Dysgonomonas mossii DSM 22836] Length = 404 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 12/105 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + +C+ C C+ CP N D Y GP + + + R Sbjct: 1 MNLQQHNISENNFEQCIKCTVCTVYCPVAAVNPD-YPGPK----------QAGPDGERLR 49 Query: 215 LDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + L C C +CP + I ++ +K Sbjct: 50 LKEADFYDEALKYCINCKRCEVACPSNVKIGDIIQSARIRYSKKK 94 >gi|224367205|ref|YP_002601368.1| HdrD1 [Desulfobacterium autotrophicum HRM2] gi|223689921|gb|ACN13204.1| HdrD1 [Desulfobacterium autotrophicum HRM2] Length = 439 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 13/87 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C CS+ CP+ P L+ +D + + ++ Sbjct: 29 NLNACLTCGACSSGCPATGLEGMD---PRKFLRMAALGMD----------EEILSSNWVW 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 C C CP +N + + + Sbjct: 76 MCTMCQRCIHVCPMEINIPQLVYYARQ 102 >gi|16765613|ref|NP_461228.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180859|ref|YP_217276.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167549719|ref|ZP_02343478.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992620|ref|ZP_02573717.1| sn-glycerol-3-phosphate dehydrogenase K-small subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237301|ref|ZP_02662359.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242402|ref|ZP_02667334.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261700|ref|ZP_02683673.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168817982|ref|ZP_02829982.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194451538|ref|YP_002046340.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194734477|ref|YP_002115356.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263568|ref|ZP_03163642.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204929224|ref|ZP_03220367.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857705|ref|YP_002244356.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224583230|ref|YP_002637028.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913495|ref|ZP_04657332.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16420825|gb|AAL21187.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62128492|gb|AAX66195.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194409842|gb|ACF70061.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194709979|gb|ACF89200.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197241823|gb|EDY24443.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289669|gb|EDY29032.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321768|gb|EDZ06967.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325398|gb|EDZ13237.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329200|gb|EDZ15964.1| sn-glycerol-3-phosphate dehydrogenase K-small subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338532|gb|EDZ25296.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345149|gb|EDZ31913.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349371|gb|EDZ36002.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709508|emb|CAR33852.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467757|gb|ACN45587.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247494|emb|CBG25321.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994376|gb|ACY89261.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158844|emb|CBW18357.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913276|dbj|BAJ37250.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086723|emb|CBY96495.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223014|gb|EFX48085.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715335|gb|EFZ06906.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130616|gb|ADX18046.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989219|gb|AEF08202.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|16761212|ref|NP_456829.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141093|ref|NP_804435.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213622137|ref|ZP_03374920.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648600|ref|ZP_03378653.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289829658|ref|ZP_06547199.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25284102|pir||AD0792 anaerobic glycerol-3-phosphate dehydrogenase chain C [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503511|emb|CAD07518.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi] gi|29136719|gb|AAO68284.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|300022219|ref|YP_003754830.1| iron-sulfur cluster-binding protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524040|gb|ADJ22509.1| iron-sulfur cluster-binding protein [Hyphomicrobium denitrificans ATCC 51888] Length = 247 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 15/124 (12%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I + D + L C+ C C+ +CP+ + P ++ Sbjct: 16 PISEKPVVDRAELESIFNDIQTDMRFDHELNGCLNCGICTATCPAAHYYD---FSPREIV 72 Query: 198 QAYRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 Q E L+ + D +++ C C CP G +P + ++ + + Sbjct: 73 QLL----------WTENLEGIYDAMQEKIWSCAQCYTCAARCPFGNSPGGLVMLMREVAI 122 Query: 256 DRKI 259 ++ Sbjct: 123 KHQM 126 >gi|168229650|ref|ZP_02654708.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469239|ref|ZP_03075223.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455603|gb|EDX44442.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335934|gb|EDZ22698.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|15611678|ref|NP_223329.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori J99] gi|4155150|gb|AAD06179.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori J99] Length = 433 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV CA C C Y + D P L R ++ + LE C Sbjct: 15 DTCVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------C 68 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 69 FLCTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|114565949|ref|YP_753103.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336884|gb|ABI67732.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 189 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 13/89 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C CS CP + P +++ + + L+ ++ C + Sbjct: 32 CYQCGKCSAGCPVGFAMDQT---PRQVIRLLQLGL----------LEEALSTESIWICAS 78 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ CP+G++ A + ++ L + Sbjct: 79 CETCSARCPRGVDIASLMDALRREALKQG 107 >gi|302391321|ref|YP_003827141.1| electron transport complex, RnfABCDGE type, C subunit [Acetohalobium arabaticum DSM 5501] gi|302203398|gb|ADL12076.1| electron transport complex, RnfABCDGE type, C subunit [Acetohalobium arabaticum DSM 5501] Length = 442 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + K +L ED + C+ CA C CP+ +L P Sbjct: 332 MMGAAQHSTDIPATKGTSGILIFQEDEVEEYESSNCIRCARCVDVCPA-------FLMPV 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L + Q + ++ L+D + + C +C+ CP + I K L Sbjct: 385 TLSKV----------AQVDMVEKLDD-YNVMDCIECGSCSYVCPANIPLLHWIRLGKDKL 433 Query: 255 LDRK 258 + Sbjct: 434 AAEQ 437 >gi|213586861|ref|ZP_03368687.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 393 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 10/89 (11%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+T+CP N Y GP D + D L Sbjct: 2 RFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYDEALK 51 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP + I + + Sbjct: 52 YCINCKRCEVACPSDVKIGDIIQRARAKY 80 >gi|194444150|ref|YP_002041547.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194402813|gb|ACF63035.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|77456976|ref|YP_346481.1| FAD linked oxidase-like [Pseudomonas fluorescens Pf0-1] gi|77380979|gb|ABA72492.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens Pf0-1] Length = 940 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVIWRDIQARKRAGIDTTELEKAYEYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + + K++ Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSR 620 >gi|161612992|ref|YP_001586957.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168466016|ref|ZP_02699886.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197250797|ref|YP_002147242.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|161362356|gb|ABX66124.1| hypothetical protein SPAB_00698 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|195631391|gb|EDX49951.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214500|gb|ACH51897.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|206889660|ref|YP_002249620.1| QmoC [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741598|gb|ACI20655.1| QmoC [Thermodesulfovibrio yellowstonii DSM 11347] Length = 382 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C C+ C+ CP + D+ P + +W I + L ++ Sbjct: 23 LKKCYQCSTCTVVCP---LSPDKAPFPRKEMLYAQWGI----------KEKLFQNPDIWL 69 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH +CT CP+G P + + ++ +++ Sbjct: 70 CHHCGDCTAYCPRGAKPGEVLGAVRKLMIQ 99 >gi|167035729|ref|YP_001670960.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida GB-1] gi|166862217|gb|ABZ00625.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida GB-1] Length = 936 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIKAKQRAGIDTRELMQTYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ D K Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAADHK 625 >gi|156740817|ref|YP_001430946.1| iron-sulfur cluster binding protein [Roseiflexus castenholzii DSM 13941] gi|156232145|gb|ABU56928.1| iron-sulfur cluster binding protein [Roseiflexus castenholzii DSM 13941] Length = 470 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 16/136 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY- 183 L V S R EP + +S K C+ C C +CP Y Sbjct: 265 LSVYTSIISGPRRPHEPDGPEEFHLVLLDNRRSEIIGGKYAEALMCIRCGACLNACPVYQ 324 Query: 184 ----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 Y GP + D D + +L C +CP Sbjct: 325 SIGGHAYGGVYSGPIGAILTPLLQPDLPDAHKLPHASSL-----------CGACEWACPV 373 Query: 240 GLNPAKAIAKIKMMLL 255 + + +++ + Sbjct: 374 KIAIPDLLLRLRADAV 389 >gi|163938964|ref|YP_001643848.1| iron-sulfur cluster binding protein [Bacillus weihenstephanensis KBAB4] gi|259495162|sp|A9VI77|LUTB1_BACWK RecName: Full=Lactate utilization protein B 1 gi|163861161|gb|ABY42220.1| iron-sulfur cluster binding protein [Bacillus weihenstephanensis KBAB4] Length = 476 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + +++ K Sbjct: 357 PYASSLCGACTEACPVKIPLHDLLIKHRSRIVEEK 391 >gi|300703923|ref|YP_003745525.1| oxido reductase, 4fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum CFBP2957] gi|299071586|emb|CBJ42910.1| putative oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum CFBP2957] Length = 469 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGEQDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--------------TLCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + ++ ++R++ Sbjct: 376 LSDLLRTLREKQMEREL 392 >gi|83745868|ref|ZP_00942925.1| iron-sulfur cluster-binding protein [Ralstonia solanacearum UW551] gi|207724149|ref|YP_002254547.1| uncharacterized protein containing a ferredoxin-like domain [Ralstonia solanacearum MolK2] gi|207742999|ref|YP_002259391.1| uncharacterized protein containing a ferredoxin-like domain [Ralstonia solanacearum IPO1609] gi|83727558|gb|EAP74679.1| iron-sulfur cluster-binding protein [Ralstonia solanacearum UW551] gi|206589358|emb|CAQ36320.1| uncharacterized conserved protein containing a ferredoxin-like domain [Ralstonia solanacearum MolK2] gi|206594396|emb|CAQ61323.1| uncharacterized conserved protein containing a ferredoxin-like domain [Ralstonia solanacearum IPO1609] Length = 469 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A+ E + C+ C C CP Y Sbjct: 270 SLLTGPRAEGEQDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--------------TLCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + ++ ++R++ Sbjct: 376 LSDLLRTLREKQMEREL 392 >gi|57168756|ref|ZP_00367887.1| iron-sulfur cluster binding protein [Campylobacter coli RM2228] gi|305432502|ref|ZP_07401664.1| iron-sulfur cluster-binding protein [Campylobacter coli JV20] gi|57019803|gb|EAL56486.1| iron-sulfur cluster binding protein [Campylobacter coli RM2228] gi|304444541|gb|EFM37192.1| iron-sulfur cluster-binding protein [Campylobacter coli JV20] Length = 479 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + Sbjct: 295 HNRTKMLAHKDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI--------- 345 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 346 ---SPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|317178971|dbj|BAJ56759.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Helicobacter pylori F30] Length = 429 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|298674499|ref|YP_003726249.1| CoB--CoM heterodisulfide reductase [Methanohalobium evestigatum Z-7303] gi|298287487|gb|ADI73453.1| CoB--CoM heterodisulfide reductase [Methanohalobium evestigatum Z-7303] Length = 412 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 13/109 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLID----------SRDE 209 ++ L C C C CP+Y + L P + +R ++ E Sbjct: 15 AVQLMELDSCTRCGECVQWCPTYSASGQEPGLAPRDKILRWRDYMNKSYGLRAKLFGPKE 74 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E LD LY+C T C C G++ I+ L+ R Sbjct: 75 ISEEELDEFSSD--LYQCTTCGICETVCESGIDTINLWEGIRANLVKRG 121 >gi|317177483|dbj|BAJ55272.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Helicobacter pylori F16] Length = 429 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|317153044|ref|YP_004121092.1| hypothetical protein Daes_1332 [Desulfovibrio aespoeensis Aspo-2] gi|316943295|gb|ADU62346.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 432 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 13/115 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 E + V+P ++ L + E + L C+ C CS CP+ + P L Sbjct: 1 MGEAAVLEVTPHKSQFLDKVKEILPEGGNLSMCLTCGACSAGCPA---TGLEDMNPRKFL 57 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + D + + ++ C C +CP G++ + + + Sbjct: 58 RLAAMGQD----------EVIMSTPWVWLCTMCRRCVHACPMGVDIPQLVYYCRQ 102 >gi|297617270|ref|YP_003702429.1| hypothetical protein Slip_1086 [Syntrophothermus lipocalidus DSM 12680] gi|297145107|gb|ADI01864.1| protein of unknown function DUF224 cysteine-rich region domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 424 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 6/104 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ E + + +CV C C T CP + + + P + + L D + + Sbjct: 1 MKFKELPPVKEQIRKCVRCGRCRTVCPVFAEVKNETVAPRGHVFMVQMLRDGVVKPDSKV 60 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++L +C C+ CP G++ + A + + + + Sbjct: 61 YEHLS------KCLLCETCSTFCPSGIDIHELNAAARSFITENQ 98 >gi|283832318|ref|ZP_06352059.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Citrobacter youngae ATCC 29220] gi|291071964|gb|EFE10073.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Citrobacter youngae ATCC 29220] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|229165988|ref|ZP_04293753.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH621] gi|228617541|gb|EEK74601.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH621] Length = 476 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + +++ K Sbjct: 357 PYASSLCGACTEACPVKIPLHDLLIKHRSRIVEEK 391 >gi|205353402|ref|YP_002227203.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273183|emb|CAR38145.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628493|gb|EGE34836.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|200386739|ref|ZP_03213351.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603837|gb|EDZ02382.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|153951992|ref|YP_001397336.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939438|gb|ABS44179.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 479 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + + Sbjct: 295 HNRSKMLSHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVISPNIFG--- 351 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +D+ D C C++ CP + A I K++ Sbjct: 352 -------IDHTGDILNF--CSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|108806196|ref|YP_650112.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Antiqua] gi|108810306|ref|YP_646073.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Nepal516] gi|145600691|ref|YP_001164767.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Pestoides F] gi|161484898|ref|NP_667744.2| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis KIM 10] gi|161511323|ref|NP_994515.2| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis biovar Microtus str. 91001] gi|162418152|ref|YP_001605158.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Angola] gi|165926364|ref|ZP_02222196.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939175|ref|ZP_02227726.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011641|ref|ZP_02232539.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213498|ref|ZP_02239533.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167401883|ref|ZP_02307371.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420840|ref|ZP_02312593.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426280|ref|ZP_02318033.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468873|ref|ZP_02333577.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis FV-1] gi|218930827|ref|YP_002348702.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis CO92] gi|229837152|ref|ZP_04457317.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis Pestoides A] gi|229839512|ref|ZP_04459671.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900075|ref|ZP_04515212.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229900479|ref|ZP_04515608.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis Nepal516] gi|108773954|gb|ABG16473.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Nepal516] gi|108778109|gb|ABG12167.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Antiqua] gi|145212387|gb|ABP41794.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Pestoides F] gi|162350967|gb|ABX84915.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis Angola] gi|165912948|gb|EDR31574.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165921888|gb|EDR39085.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989410|gb|EDR41711.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205171|gb|EDR49651.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960969|gb|EDR56990.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048776|gb|EDR60184.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054799|gb|EDR64603.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682498|gb|EEO78585.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis Nepal516] gi|229686855|gb|EEO78934.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229695878|gb|EEO85925.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706095|gb|EEO92104.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Yersinia pestis Pestoides A] Length = 431 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 10/109 (9%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 K + ++ + + C+ C C+T CP N Y GP Sbjct: 5 PKHDASPEQDGMMVGDSRLTRDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA------ 57 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 58 ---GPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 103 >gi|311696980|gb|ADP99853.1| iron-sulfur cluster binding protein [marine bacterium HP15] Length = 483 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + LD + D Sbjct: 316 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKII----------TPHMAGLDKVPDHPS 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + + + +++ + Sbjct: 366 ASS--LCGACGEVCPVKIPIPELLQRLRQENVK 396 >gi|257094669|ref|YP_003168310.1| D-lactate dehydrogenase (cytochrome) [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047193|gb|ACV36381.1| D-lactate dehydrogenase (cytochrome) [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 930 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 10/133 (7%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL+ + + + + P + A D + C+ C C CPS+ Sbjct: 492 DLMRRIKTLFDPNNLLNPGVIINDDPQAHLKNLKPMPAA-EDIIDRCIECGFCEPLCPSH 550 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKG 240 L P + ++R L SR GE ++ F L C C+ +CP G Sbjct: 551 RLT----LSPRQRIVSWREL--SRRAAAGEEAADVGKDFAYFGLDTCAGCGLCSTACPVG 604 Query: 241 LNPAKAIAKIKMM 253 ++ + +++ Sbjct: 605 IDTGELTRRLRGR 617 >gi|78358567|ref|YP_390016.1| hydrogenase, iron-sulfur cluster-binding subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220972|gb|ABB40321.1| hydrogenase, iron-sulfur cluster-binding subunit, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 320 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 4/94 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + C+ C C ++CP A + W+ + + Sbjct: 198 RFWEQEMSRCLRCYACRSACPLCVCQDHC----AAQSRNPHWVTQEDTPREKLMFQAIHA 253 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP + + + Sbjct: 254 LHLAGRCTECGECERACPMDIPVLALKQALNREI 287 >gi|229131954|ref|ZP_04260819.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST196] gi|228651545|gb|EEL07515.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST196] Length = 476 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ DE++ Y Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAVLTPLLGGYDEYKDL----------PY 358 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP + + K + +++ K Sbjct: 359 ASSLCGACTEACPVKIPLHDLLIKHRSRIVEEK 391 >gi|304314351|ref|YP_003849498.1| conserved iron-sulfur cluster binding protein [Methanothermobacter marburgensis str. Marburg] gi|302587810|gb|ADL58185.1| conserved iron-sulfur cluster binding protein [Methanothermobacter marburgensis str. Marburg] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 14/92 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL----LQAYRWLIDSRDEFQGERLDNLE 219 C+ C C SCP Y +R+ L + +L D R+ Sbjct: 288 YPEALLCIGCGSCIVSCPVYNAVGNRFGYRGYLGGRGVVMSSFLAD-RETAV-------- 338 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 LY C CT+ CP G A + +++ Sbjct: 339 -ESGLYMCTLCGLCTEKCPVGTPTASLMERLR 369 >gi|224373587|ref|YP_002607959.1| electron transport protein [Nautilia profundicola AmH] gi|223588739|gb|ACM92475.1| electron transport protein [Nautilia profundicola AmH] Length = 433 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVY-PLPHMSVIKDLVVDMSHFYSQH--RSIEPW 142 G + + N ++ + +P+M KDL V + + I + Sbjct: 200 GWAVVCTNEGNADLGAVLPPLHIISVGIEKIVPNM---KDLGVFLRMLARNATGQKITTY 256 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLY-------ECVMCACCSTSCPSYWWNSDRYLGPAI 195 K + + D + + L +C+ C+ C T+CP + Sbjct: 257 TSIFGKKDNGKRVIILVDNGRFERLKSQFKETLKCIRCSACLTTCPVFR---------RS 307 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRL----YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +YR++I G L L D + C +C CP + K + ++ Sbjct: 308 GGHSYRYVI---PGPIGSLLAPLTDKEEYSDLPFACTLCGSCETVCPVKIPFTKQLVNMR 364 Query: 252 MML 254 + Sbjct: 365 HYV 367 >gi|94272609|ref|ZP_01292155.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93450067|gb|EAT01428.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 186 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L+ C C CS +CP D P L+ R + ERL L+ Sbjct: 24 HLHRCYSCGACSGACPVSQAIPD--FDPRRLIHMVRMGL-------KERLFA---SDLLW 71 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C CP+ + A+ + ++ + ++ + Sbjct: 72 YCSSCRGCVFVCPQDVRFAEIVDALRQLAYEQGL 105 Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 9/98 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + E D L+ C C C CP + + A ++ A R L + Sbjct: 54 HMVRMGLKERLFASDLLWYCSSCRGCVFVCP-------QDVRFAEIVDALRQLAYEQGLI 106 Query: 211 QGERLDNLEDPFRLYR--CHTIMNCTQSCPKGLNPAKA 246 E+L + R C + + C + CP + A Sbjct: 107 SDEQLVEKGKAVAVDRDLCVSCLTCVRVCPWRIPVIDA 144 Score = 35.1 bits (79), Expect = 9.0, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Query: 217 NLEDPFRLYRCHTIMNCTQSCPK-----GLNPAKAIAKIKMMLLDR 257 L L+RC++ C+ +CP +P + I ++M L +R Sbjct: 18 ALPGGEHLHRCYSCGACSGACPVSQAIPDFDPRRLIHMVRMGLKER 63 >gi|237732283|ref|ZP_04562764.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Citrobacter sp. 30_2] gi|226907822|gb|EEH93740.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Citrobacter sp. 30_2] Length = 396 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPS-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 DALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|46199303|ref|YP_004970.1| iron-sulfur cluster-binding protein [Thermus thermophilus HB27] gi|46196928|gb|AAS81343.1| iron-sulfur cluster-binding protein [Thermus thermophilus HB27] Length = 462 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 9/96 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP Y G ++D L LE+ + L Sbjct: 305 WETLRCLRCGACLNACPVYRQTGGHPYGYVYSGPIGA-VLDPG-------LLTLEEAYPL 356 Query: 225 -YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C ++CP + K + + ++ + Sbjct: 357 PYASTLCGACLEACPVKIPIPKLLLAWRHRAVEEGL 392 >gi|332673513|gb|AEE70330.1| iron-sulfur cluster-binding domain protein [Helicobacter pylori 83] Length = 429 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|308184454|ref|YP_003928587.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori SJM180] gi|308060374|gb|ADO02270.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori SJM180] Length = 429 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 67 CTACVETCPFHLPIDTLIEKAREKIAQK 94 >gi|315181740|gb|ADT88653.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio furnissii NCTC 11218] Length = 250 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 29/99 (29%), Gaps = 10/99 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N D Y GP L E+ Sbjct: 1 MNAPFSKAAPLNTSFDQCIKCTVCTVYCPVAKANPD-YPGPKQCGPDGERLRIKNPEYYD 59 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E L C C +CP G+ IA + Sbjct: 60 EALK---------YCTNCKRCETACPSGVKIGDIIAVAR 89 >gi|208779381|ref|ZP_03246727.1| oxidoreductase, FAD-binding [Francisella novicida FTG] gi|208745181|gb|EDZ91479.1| oxidoreductase, FAD-binding [Francisella novicida FTG] Length = 936 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLFNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 555 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VDINTGSFIKDLRAEQNKANI 631 >gi|89897475|ref|YP_520962.1| hypothetical protein DSY4729 [Desulfitobacterium hafniense Y51] gi|89336923|dbj|BAE86518.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 682 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 30/131 (22%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-------------WWNSDRYLGPAILLQAYR 201 ++ + C C C +CP+ L ++Q Y Sbjct: 260 RIEGYTWNQLLDCFACGECGRCMDNCPANLSGKPLNPKELLSRTLKHHLLAKGEVMQKYG 319 Query: 202 W---------------LIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 D Q ++++ L+ C T M+C CP Sbjct: 320 LKSTGEESAEAIAEIAATHPEDAAILQQSLINDVVTEDVLWSCTTCMSCQVQCPVSNEHV 379 Query: 245 KAIAKIKMMLL 255 I ++ L+ Sbjct: 380 NKIIDLRRYLV 390 >gi|229016352|ref|ZP_04173297.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1273] gi|229027190|ref|ZP_04183474.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1272] gi|228734116|gb|EEL84826.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1272] gi|228744944|gb|EEL95001.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1273] Length = 476 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ DE++ Y Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAVLTPLLGGYDEYKDL----------PY 358 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP + + K + +++ K Sbjct: 359 ASSLCGACTEACPVKIPLHDLLIKHRSRIVEEK 391 >gi|147678217|ref|YP_001212432.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] gi|146274314|dbj|BAF60063.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] Length = 406 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + CV C C +CP + + P + L E + Sbjct: 9 KEHYMRCVRCGQCRAACPVFEEIRNETASPRGKVFLAYLLSGGEIGADAETASKMS---- 64 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C+Q CP + + +A + L +K Sbjct: 65 --LCLLCRTCSQECPSAVPVHQIVAAARSHLAKKK 97 >gi|119872844|ref|YP_930851.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674252|gb|ABL88508.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 99 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 9/103 (8%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + I +C C C +CP+Y R+ GP + + D + + R Sbjct: 1 MRDMKGIITEASKCQFCGFCEFACPTYRVFRMRHFGPRGRINIVK-NFDGKISEEAYR-- 57 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP + + I K L+ +++ Sbjct: 58 ------GVMTCLACGACEIQCPAEIKITEVIHTFKTFLISQRL 94 >gi|303325549|ref|ZP_07355992.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] gi|302863465|gb|EFL86396.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] Length = 433 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 16/96 (16%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLDNL 218 D + C+ C C + CP + + L A+ L D + L Sbjct: 15 DDRITACMKCGMCQSVCPMFGASGKEADVARGKLFLINNMAHELLKDP---------EAL 65 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L RC +C +CP G+ + + + ++ Sbjct: 66 ADK--LGRCLLCGSCQAACPPGVKIMEVFMEARELV 99 >gi|300691353|ref|YP_003752348.1| oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum PSI07] gi|299078413|emb|CBJ51064.1| putative oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum PSI07] Length = 469 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 56/197 (28%), Gaps = 39/197 (19%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A E + C+ C C CP Y Sbjct: 270 SLLTGPRAAGEQDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y GP + +Y L ++ D Q C + CP + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--------------TLCGECNRVCPASIP 375 Query: 243 PAKAIAKIKMMLLDRKI 259 + + ++ ++R++ Sbjct: 376 LSDLLRTLREKQMEREL 392 >gi|298529300|ref|ZP_07016703.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510736|gb|EFI34639.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 375 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C++C C CP + + + P +L+ + L L C Sbjct: 14 CILCGRCLEVCPLFKVTAHEEMSPRGKA----FLVQ-HFSSKDISLKEASKLAGL--CAG 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMM 253 CT CP+G++ + I+ +K Sbjct: 67 CNRCTTVCPQGIDLPRLISSLKSR 90 >gi|325968155|ref|YP_004244347.1| Fe-S oxidoreductase [Vulcanisaeta moutnovskia 768-28] gi|323707358|gb|ADY00845.1| Fe-S oxidoreductase [Vulcanisaeta moutnovskia 768-28] Length = 377 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 15/115 (13%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + E + + L C C CST CP + Y I+ +A ++ Sbjct: 1 MIDMPVTVNFGLREELLKIVPTLSLCYQCGTCSTYCPI---TDESYNIRLIVKKAQLGIV 57 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +D ++ C T C CP + + I+ M + K+ Sbjct: 58 DPKDYKV------------IWDCVTCGTCQTLCPNNVEIVNLVEVIRTMAMKSKV 100 >gi|149919524|ref|ZP_01908004.1| putative iron-sulfur-binding reductase [Plesiocystis pacifica SIR-1] gi|149819649|gb|EDM79076.1| putative iron-sulfur-binding reductase [Plesiocystis pacifica SIR-1] Length = 764 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 15/35 (42%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C + CP + I +++ ++ Sbjct: 423 DETLWSCTTCGACQEVCPVFIEHPLKILQMRTRIV 457 Score = 40.1 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 5/39 (12%) Query: 225 YRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRK 258 Y C CT CP K L+P I +K + DR Sbjct: 317 YACTECARCTTYCPAFATQKPLSPMHLIHDLKDEMKDRG 355 >gi|240950090|ref|ZP_04754388.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus minor NM305] gi|240295421|gb|EER46184.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus minor NM305] Length = 424 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 12/106 (11%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + + C+ C C+ CP N Y GP S + + Sbjct: 14 MQEPVSHQYFDPSFESCLKCTACTAVCPVTKVNP-FYPGPK----------QSGPDGERL 62 Query: 214 RLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RL + L C C +CP + I + + +DR+ Sbjct: 63 RLKSENFYDEALKYCLNCKRCEVACPSDVKIGDIIVRARNSHMDRQ 108 >gi|227111788|ref|ZP_03825444.1| putative electron transport protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 478 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 56/224 (25%), Gaps = 25/224 (11%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFEEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPQEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + C+ C C +CP+Y G + L Sbjct: 299 SQILGSAFRDILRCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVI--------SPLLG 350 Query: 217 NLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +D L Y C C CP + + I K + ++ + I Sbjct: 351 GYQDFKELPYACSLCTACDTVCPVRIPLSSLILKHRRVMAENGI 394 >gi|298527952|ref|ZP_07015356.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511604|gb|EFI35506.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 423 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C CP + + L L + E DNL R Sbjct: 18 LTRCMRCGMCQAQCPVFTKSGKETDVTRGKLALLSGLSQEMLKDPKEVQDNLN------R 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ K + +L Sbjct: 72 CLLCGTCEANCPSGVKVTDIFLKARAIL 99 >gi|86154033|ref|ZP_01072234.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842447|gb|EAQ59661.1| iron-sulfur cluster binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 479 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 17/104 (16%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C CP Y Y GP + Sbjct: 295 HNHSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI--------- 345 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 346 ---SPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 386 >gi|269140454|ref|YP_003297155.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Edwardsiella tarda EIB202] gi|267986115|gb|ACY85944.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Edwardsiella tarda EIB202] gi|304560246|gb|ADM42910.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Edwardsiella tarda FL6-60] Length = 399 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + D Sbjct: 6 DNSFEQCIKCTVCTTYCPVAKVNP-AYPGPKQA---------GPDGERLRLKDPQLYDEA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIILRAKNQY 86 >gi|237729221|ref|ZP_04559702.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908950|gb|EEH94868.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 475 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + + D Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKDLP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + +K I + + ++ + I Sbjct: 364 LCTACDSVCPVRIPLSKLILRHRRVMAEEGI 394 >gi|332678283|gb|AEE87412.1| Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Francisella cf. novicida Fx1] Length = 936 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLFNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 555 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VDINTGSFIKDLRAEQNKANI 631 >gi|237508970|ref|ZP_04521685.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] gi|235001175|gb|EEP50599.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|229056784|ref|ZP_04196185.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH603] gi|228720525|gb|EEL72091.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH603] Length = 476 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ DE++ Y Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAVLTPLLGGYDEYKDL----------PY 358 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP + + K + +++ K Sbjct: 359 ASSLCGACTEACPVKIPLHDLLIKHRSRIVEEK 391 >gi|167838795|ref|ZP_02465613.1| iron-sulfur cluster-binding protein [Burkholderia thailandensis MSMB43] Length = 478 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|167818545|ref|ZP_02450225.1| iron-sulfur binding protein [Burkholderia pseudomallei 91] Length = 438 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|167578880|ref|ZP_02371754.1| iron-sulfur cluster binding protein [Burkholderia thailandensis TXDOH] Length = 482 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|167564980|ref|ZP_02357896.1| iron-sulfur cluster binding protein [Burkholderia oklahomensis EO147] Length = 481 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 308 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 365 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 366 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 399 >gi|53721357|ref|YP_110342.1| iron-sulfur binding protein [Burkholderia pseudomallei K96243] gi|52211771|emb|CAH37770.1| putative iron-sulfur binding protein [Burkholderia pseudomallei K96243] Length = 482 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|167896996|ref|ZP_02484398.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 7894] gi|167905375|ref|ZP_02492580.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei NCTC 13177] gi|167921614|ref|ZP_02508705.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei BCC215] gi|217423155|ref|ZP_03454657.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] gi|254299416|ref|ZP_04966865.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 406e] gi|157809511|gb|EDO86681.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 406e] gi|217394063|gb|EEC34083.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 576] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|83716547|ref|YP_440267.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] gi|167616979|ref|ZP_02385610.1| iron-sulfur cluster binding protein [Burkholderia thailandensis Bt4] gi|257140896|ref|ZP_05589158.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] gi|83650372|gb|ABC34436.1| iron-sulfur cluster binding protein [Burkholderia thailandensis E264] Length = 482 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|53716996|ref|YP_106036.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 23344] gi|52422966|gb|AAU46536.1| iron-sulfur cluster binding protein [Burkholderia mallei ATCC 23344] Length = 482 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|1890198|emb|CAA70997.1| heterodisulfide reductase [Methanosarcina barkeri] Length = 409 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 13/110 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLID----------SRDE 209 ++ L CV C C CP+Y + + L P + +R ++ E Sbjct: 15 AVQLMELDACVRCGECVKWCPTYAASGGHQGLAPRDKILRWRQYMNKSYGLKAKLFGPQE 74 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ +D ++ C T C C G+N + I+ L+ + I Sbjct: 75 VSPSELEEFKDD--VHGCTTCGVCATVCEAGINTVEIWEAIRTNLVKKGI 122 >gi|126456646|ref|YP_001074502.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106a] gi|134284218|ref|ZP_01770910.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 305] gi|167848444|ref|ZP_02473952.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei B7210] gi|167913674|ref|ZP_02500765.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 112] gi|242313873|ref|ZP_04812890.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106b] gi|254189362|ref|ZP_04895872.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|126230414|gb|ABN93827.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106a] gi|134244421|gb|EBA44527.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 305] gi|157937040|gb|EDO92710.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|242137112|gb|EES23515.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1106b] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|126442529|ref|YP_001061562.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 668] gi|126222020|gb|ABN85525.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 668] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|254182689|ref|ZP_04889282.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1655] gi|184213223|gb|EDU10266.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1655] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|67643358|ref|ZP_00442105.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|251768069|ref|ZP_04820390.1| iron-sulfur cluster-binding protein [Burkholderia mallei PRL-20] gi|254176148|ref|ZP_04882806.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|254200890|ref|ZP_04907255.1| iron-sulfur cluster-binding protein [Burkholderia mallei FMH] gi|254204855|ref|ZP_04911208.1| iron-sulfur cluster-binding protein [Burkholderia mallei JHU] gi|147748502|gb|EDK55577.1| iron-sulfur cluster-binding protein [Burkholderia mallei FMH] gi|147754441|gb|EDK61505.1| iron-sulfur cluster-binding protein [Burkholderia mallei JHU] gi|160697190|gb|EDP87160.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|238524689|gb|EEP88121.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|243060887|gb|EES43073.1| iron-sulfur cluster-binding protein [Burkholderia mallei PRL-20] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|124381513|ref|YP_001025976.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] gi|126447093|ref|YP_001078067.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|254358967|ref|ZP_04975239.1| iron-sulfur cluster-binding protein [Burkholderia mallei 2002721280] gi|126239947|gb|ABO03059.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|148028154|gb|EDK86114.1| iron-sulfur cluster-binding protein [Burkholderia mallei 2002721280] gi|261826356|gb|ABN00222.2| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] Length = 477 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAEVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|323475540|gb|ADX86146.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] gi|323478255|gb|ADX83493.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 344 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 15/85 (17%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C +CP+Y + P ++A R I+S C Sbjct: 9 EMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINS---------------VGFETC 53 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKM 252 C +CP G+ + I ++ Sbjct: 54 MYCRLCETACPAGVKYGQIITPVRK 78 >gi|313903692|ref|ZP_07837081.1| iron-sulfur cluster binding protein [Thermaerobacter subterraneus DSM 13965] gi|313465880|gb|EFR61405.1| iron-sulfur cluster binding protein [Thermaerobacter subterraneus DSM 13965] Length = 889 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 19/101 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR-----YLGP-AILLQAYRWLIDSRDEFQGERLDN 217 C+ C C +CP Y Y GP ++ +D D+ Sbjct: 356 FQVALHCIRCGACLNACPVYRQIGGHPYGGVYSGPIGAVITPLLGGLDGWDDLP------ 409 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C ++CP + + ++ +++R Sbjct: 410 -------YASSLCGACHEACPVMIPLHDLLLDLREEVVNRG 443 >gi|301059728|ref|ZP_07200625.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446175|gb|EFK10043.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 582 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 162 QKIDGLYECVMCACCSTSC---PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +++ L C C CS C P++ + + P+ LQ R L ++ E+ L Sbjct: 325 RQMMELDACTHCGTCSLRCSSYPAFDALHNDCILPSEKLQTLRKLAAGKNLSDPEQQALL 384 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +Y C CT CP G+N ++ LL Sbjct: 385 ---EGMYICTNCDRCTVVCPSGINLRDLWLNVREGLLQ 419 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 10/92 (10%) Query: 167 LYECVMCACCSTSCPSYWW--NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C C C++ CP + LG + D G R+ + Sbjct: 491 FRGCYTCQNCTSVCPVVALSDKPEETLGLLPHQIMCGLGLGLTDLACGARM--------I 542 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C T C + CP+ ++ + ++K + + Sbjct: 543 WDCVTCYQCQEHCPQLVDVTDILYQLKNIAIK 574 Score = 35.9 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 9/20 (45%) Query: 220 DPFRLYRCHTIMNCTQSCPK 239 D C+T NCT CP Sbjct: 487 DAETFRGCYTCQNCTSVCPV 506 >gi|227831216|ref|YP_002832996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|229580105|ref|YP_002838505.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|229581235|ref|YP_002839634.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284998720|ref|YP_003420488.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457664|gb|ACP36351.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|228010821|gb|ACP46583.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011951|gb|ACP47712.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446616|gb|ADB88118.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 344 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 15/85 (17%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C +CP+Y + P ++A R I+S C Sbjct: 9 EMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINS---------------VGFETC 53 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKM 252 C +CP G+ + I ++ Sbjct: 54 MYCRLCETACPAGVKYGQIITPVRK 78 >gi|254374397|ref|ZP_04989879.1| hypothetical protein FTDG_00564 [Francisella novicida GA99-3548] gi|151572117|gb|EDN37771.1| hypothetical protein FTDG_00564 [Francisella novicida GA99-3548] Length = 936 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLFNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 555 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VDINTGSFIKDLRAEQNKANI 631 >gi|257464624|ref|ZP_05628995.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus minor 202] gi|257450284|gb|EEV24327.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus minor 202] Length = 424 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 12/106 (11%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + + C+ C C+ CP N Y GP S + + Sbjct: 14 MQEPVSHQYFDPSFESCLKCTACTAVCPVTKVNP-FYPGPK----------QSGPDGERL 62 Query: 214 RLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RL + L C C +CP + I + + +DR+ Sbjct: 63 RLKSENFYDEALKYCLNCKRCEVACPSDVKIGDIIVRARNSHMDRQ 108 >gi|238921320|ref|YP_002934835.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Edwardsiella ictaluri 93-146] gi|238870889|gb|ACR70600.1| sn-glycerol-3-phosphate dehydrogenase subunit C, putative [Edwardsiella ictaluri 93-146] Length = 399 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + D Sbjct: 6 DNSFEQCIKCTVCTTYCPVAKVNP-AYPGPKQA---------GPDGERLRLKDPQLYDEA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIILRAKNQY 86 >gi|217032485|ref|ZP_03437977.1| hypothetical protein HPB128_156g15 [Helicobacter pylori B128] gi|216945831|gb|EEC24452.1| hypothetical protein HPB128_156g15 [Helicobacter pylori B128] Length = 433 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|206889550|ref|YP_002248509.1| iron-sulfur cluster-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741488|gb|ACI20545.1| iron-sulfur cluster-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 438 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 5/95 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C+ C C ++CP Y + ++ E L L Sbjct: 17 KKELIRCMKCGNCMSACPIYNVEKKESSVARGKIALGEAVLSDEINIDDETLVKL----- 71 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C +C +CP G+ + I ++ + +K Sbjct: 72 IFNCLVCKSCMLACPSGVRYDRIILGLRAAIAKKK 106 >gi|167769748|ref|ZP_02441801.1| hypothetical protein ANACOL_01082 [Anaerotruncus colihominis DSM 17241] gi|167668109|gb|EDS12239.1| hypothetical protein ANACOL_01082 [Anaerotruncus colihominis DSM 17241] Length = 437 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 14/113 (12%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P E C C+ C+ CP + +A R + Sbjct: 226 PVDHPLWKLREETLNMQLIRSVCCQCSMCTQMCPRNALGLN-----VQPHKAMRTIAQGT 280 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCT-QSCPKGLNPAKAIAKIKMMLLDRKI 259 D L D ++ C CT +C GL P++A+ ++K ML + + Sbjct: 281 D--------LLGDANGVFSCCNCGVCTYYACNFGLKPSQAMQQMKAMLAQKGV 325 >gi|41017066|sp|O27906|HDRC_METTH RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit C Length = 185 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS G + + + + D + L+ Sbjct: 32 LEYCFQCGTCTGSCPS---------GRRTPYRVRQIIR----KANVGLKDEIISDPALWM 78 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T +C + CP+ + + + Sbjct: 79 CTTCYSCQERCPRKVKIVDVVKLARNEAAKAG 110 >gi|308272000|emb|CBX28608.1| hypothetical protein N47_G39320 [uncultured Desulfobacterium sp.] Length = 503 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 10/94 (10%) Query: 167 LYECVMCACCSTSCPSYW--WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C C CST CP N +L + +D G R+ L Sbjct: 403 YAYCFTCENCSTVCPVVENYENPQNHLDLLPHQIIRSLVFGIKDLALGSRM--------L 454 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C T C + CP+G+ ++K + + Sbjct: 455 WYCLTCYQCQEHCPQGVKVTDIFYELKNIAVKEA 488 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Query: 162 QKIDGLYECVMCACCSTSCP---SYWWNSDRYLGPAILLQAYRWLID--SRDEFQGERLD 216 +++ L C C CS C ++ + + P+ + +L D +R + L Sbjct: 234 RQVMELDACTHCGTCSYRCSVAVAFDSIGNENILPSERMV---FLKDYITRKDTGERGLA 290 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +Y C CT CP G+N ++ ++ Sbjct: 291 AIRQ--GIYLCTNCDRCTVVCPAGINLRDLWYNVREEMIQHG 330 >gi|301061173|ref|ZP_07201962.1| conserved domain protein [delta proteobacterium NaphS2] gi|300444715|gb|EFK08691.1| conserved domain protein [delta proteobacterium NaphS2] Length = 100 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 14/92 (15%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + +C C C+ CP + + P +++ + R LE+ L Sbjct: 18 NTTMDCFNCGTCAAICPLIYEH-----FPRKMIRYAQIGAKDR---------ILENYEDL 63 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +RC C Q+CP+ +P I ++ ++D Sbjct: 64 WRCLHCGLCIQTCPREADPGDLILGLRRFVVD 95 >gi|283853310|ref|ZP_06370559.1| CoB--CoM heterodisulfide reductase [Desulfovibrio sp. FW1012B] gi|283571291|gb|EFC19302.1| CoB--CoM heterodisulfide reductase [Desulfovibrio sp. FW1012B] Length = 388 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 7/100 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R+ + C C C +CP++ + P R + R+ +D Sbjct: 11 RELDRIVATCARCGFCKVACPTFPFGGGFETFSPRAKAYFLREYLAGREALSPAWVD--- 67 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 R YRC T C C + + ++ ++ + + Sbjct: 68 ---RFYRCTTCERCQTVCQTAIPLVELWETVRADIVRQGL 104 >gi|256830112|ref|YP_003158840.1| putative heterodisulfide reductase subunit C [Desulfomicrobium baculatum DSM 4028] gi|256579288|gb|ACU90424.1| putative heterodisulfide reductase, C subunit [Desulfomicrobium baculatum DSM 4028] Length = 188 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 13/93 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C+ SCP+ + + P + + ++ + LD + + + Sbjct: 25 ELGACMQCGTCTASCPNGFAMD---VTPRQMWRMVQFGM----------LDTILESKTFW 71 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CT CP+GL +A+ +K + +R Sbjct: 72 MCSSCYMCTLRCPRGLKLTRAMGALKRLARERG 104 >gi|223935455|ref|ZP_03627372.1| FAD linked oxidase domain protein [bacterium Ellin514] gi|223895865|gb|EEF62309.1| FAD linked oxidase domain protein [bacterium Ellin514] Length = 947 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 159 EDRQKIDGLYECVMCACC----STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +D + L +C C C T CP++ + + R +++ R G+ Sbjct: 533 KDNSFVGNLEQCNGCGGCRKDAPTMCPTFVATGEEIMSTRGRANTIRAVLEHRGADGGDP 592 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + E L C + CT CP +N +A +K LL + Sbjct: 593 LSSEELETALANCLSCKACTTECPSNVN----MALLKAELLYAR 632 >gi|299536889|ref|ZP_07050196.1| putative electron transport protein [Lysinibacillus fusiformis ZC1] gi|298727713|gb|EFI68281.1| putative electron transport protein [Lysinibacillus fusiformis ZC1] Length = 475 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C +CP Y Y GP ++ L+ D+F+ Sbjct: 312 QCIRCAACVNACPVYRHVGGHTYGSIYSGPVGVV--LSPLLGGYDDFKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y CT +CP + + I + + ++++ Sbjct: 360 PYASTLCGACTDACPVKIPLHQLIHRHRQVIVE 392 >gi|229101994|ref|ZP_04232707.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-28] gi|228681381|gb|EEL35545.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-28] Length = 417 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|227114704|ref|ZP_03828360.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 123 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + R D Sbjct: 6 DNSFEDCIKCTVCTTYCPVSRVNP-LYPGPKQA---------GPDGERLRRKDPALYDDA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIIQRAK 83 >gi|126650702|ref|ZP_01722918.1| hypothetical protein BB14905_04308 [Bacillus sp. B14905] gi|126592367|gb|EAZ86385.1| hypothetical protein BB14905_04308 [Bacillus sp. B14905] Length = 476 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C +CP Y Y GP ++ L+ D+F+ Sbjct: 312 QCIRCAACVNACPVYRHVGGHTYGSIYSGPVGVV--LSPLLGGYDDFKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y CT +CP + + I + + ++++ Sbjct: 360 PYASTLCGACTDACPVKIPLHQLIHRHRQVIVE 392 >gi|21673697|ref|NP_661762.1| heterodisulfide reductase, putative [Chlorobium tepidum TLS] gi|21646818|gb|AAM72104.1| heterodisulfide reductase, putative [Chlorobium tepidum TLS] Length = 391 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP D P + +W + D L ++ Sbjct: 25 LKKCYQCATCSVVCP---LAPDDKPFPRKEMLMAQWGL----------KDELLKSSDIWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C++ CP+G P ++ ++ ++ Sbjct: 72 CHNCNDCSKYCPRGAKPGDVLSILRKAVIQE 102 >gi|298736364|ref|YP_003728890.1| anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC [Helicobacter pylori B8] gi|298355554|emb|CBI66426.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit (GlpC) [Helicobacter pylori B8] Length = 433 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|327482053|gb|AEA85363.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri DSM 4166] Length = 950 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R ++ L + Sbjct: 547 DKCIECGFCEPVCPSNGLT----LTPRQRIVIWRDIQARKRAGVDTTEIERLYHYHGVET 602 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + K++ Sbjct: 603 CAATGLCAQRCPVGINTGDLVRKLRGR 629 >gi|317152498|ref|YP_004120546.1| putative heterodisulfide reductase subunit C [Desulfovibrio aespoeensis Aspo-2] gi|316942749|gb|ADU61800.1| putative heterodisulfide reductase, C subunit [Desulfovibrio aespoeensis Aspo-2] Length = 189 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 13/85 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ SCP++ + +R + LD + + + C + Sbjct: 30 CMQCGTCTASCPNWHAMD------VSPRRMWRMIQFGM-------LDEILESRTFWLCSS 76 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 CT CP+GL A+ +K + Sbjct: 77 CYMCTLRCPRGLKLTSAMGALKRLA 101 >gi|146283658|ref|YP_001173811.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri A1501] gi|145571863|gb|ABP80969.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri A1501] Length = 950 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R ++ L + Sbjct: 547 DKCIECGFCEPVCPSNGLT----LTPRQRIVIWRDIQARKRAGVDTTEIERLYHYHGVET 602 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + K++ Sbjct: 603 CAATGLCAQRCPVGINTGDLVRKLRGR 629 >gi|70734308|ref|YP_257948.1| FAD-binding oxidoreductase [Pseudomonas fluorescens Pf-5] gi|68348607|gb|AAY96213.1| oxidoreductase, FAD-binding [Pseudomonas fluorescens Pf-5] Length = 936 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVIWRDIQARKRAGIDTSELEAAYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + + K++ Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSE 620 >gi|229095880|ref|ZP_04226858.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-29] gi|229114833|ref|ZP_04244246.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock1-3] gi|228668525|gb|EEL23954.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock1-3] gi|228687504|gb|EEL41404.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-29] Length = 417 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|227828462|ref|YP_002830242.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|229585691|ref|YP_002844193.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238620654|ref|YP_002915480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|227460258|gb|ACP38944.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|228020741|gb|ACP56148.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238381724|gb|ACR42812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] Length = 344 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 15/85 (17%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C +CP+Y + P ++A R I+S + C Sbjct: 9 EMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINS---------------VGIETC 53 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKM 252 C +CP G+ + I ++ Sbjct: 54 MYCRLCETACPAGVKYGQIITPVRK 78 >gi|330807454|ref|YP_004351916.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375562|gb|AEA66912.1| Putative oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 955 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS D L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPS----KDLTLSPRQRIVIWRDIQAKKRAGTDTTELERAYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C Q CP G+N + + K++ Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSR 620 >gi|169827795|ref|YP_001697953.1| putative electron transport protein [Lysinibacillus sphaericus C3-41] gi|259495066|sp|B1HVX5|LUTB_LYSSC RecName: Full=Lactate utilization protein B gi|168992283|gb|ACA39823.1| Putative electron transport protein [Lysinibacillus sphaericus C3-41] Length = 476 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C +CP Y Y GP ++ L+ D+F+ Sbjct: 312 QCIRCAACVNACPVYRHVGGHTYGSIYSGPLGVV--LSPLLGGYDDFKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y CT +CP + + I + + ++++ Sbjct: 360 PYASTLCGACTDACPVKIPLHQLIHRHRQVIVE 392 >gi|87118385|ref|ZP_01074284.1| electron transport complex protein RnfC [Marinomonas sp. MED121] gi|86166019|gb|EAQ67285.1| electron transport complex protein RnfC [Marinomonas sp. MED121] Length = 1251 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 25/125 (20%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I V L S ++ C+ C C +CP+ ++L Q Sbjct: 343 ISDNQVPVVKTSNCILAASTKELPTPAPEQACIRCGMCEQACPA-----------SLLPQ 391 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK 251 W S++ + E L+ C C+ CP + + AI + + Sbjct: 392 QLLWFSKSQEHEKAEH-------HNLFDCIECGACSYVCPSSIPLVQYYRHTKSAIRESR 444 Query: 252 MMLLD 256 + Sbjct: 445 EAAVK 449 >gi|332298656|ref|YP_004440578.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] gi|332181759|gb|AEE17447.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] Length = 308 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 4/82 (4%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CP+ + P + D F+ + Sbjct: 177 FWRGELSRCIRCNACRNVCPACSCELCVFDNPGSGVA----NKAPSDSFEENMFHIIRAF 232 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 RC C++ CP+ + Sbjct: 233 HVAGRCTDCGECSRVCPQHIPL 254 >gi|302392550|ref|YP_003828370.1| hypothetical protein Acear_1800 [Acetohalobium arabaticum DSM 5501] gi|302204627|gb|ADL13305.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acetohalobium arabaticum DSM 5501] Length = 420 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++ D L CV C C CP + + + +++ E + + +E Sbjct: 6 QEIEDELANCVKCGLCREVCPIFTELDNEAAVARGKVNLMESVLNEDLELTDKYKEFME- 64 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP G+ K + K + L D K Sbjct: 65 -----LCLLCKACADNCPCGVEVDKLVLKAREELADEK 97 >gi|296271662|ref|YP_003654293.1| D-lactate dehydrogenase [Arcobacter nitrofigilis DSM 7299] gi|296095837|gb|ADG91787.1| D-lactate dehydrogenase (cytochrome) [Arcobacter nitrofigilis DSM 7299] Length = 943 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 10/130 (7%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQ---------KIDGLYECVMCACCSTSCPSY 183 ++ SI+ ++ + D + C+ C C CPS Sbjct: 502 FNMMESIKNIFDPSGILNPGVIINHDKQAHLKNLKPLPQTNDLVDTCIECGFCEPMCPSN 561 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + R + E L + C T C+ +CP G++ Sbjct: 562 AITFTPRHRIVANREISRLESIGEQKEADE-LKEAYVYDGIETCATCSLCSTACPVGIDT 620 Query: 244 AKAIAKIKMM 253 ++ Sbjct: 621 GALTKYLRHE 630 >gi|226946332|ref|YP_002801405.1| iron-sulfur cluster binding protein-like protein [Azotobacter vinelandii DJ] gi|226721259|gb|ACO80430.1| iron-sulfur cluster binding protein-like protein [Azotobacter vinelandii DJ] Length = 482 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y + G + + + P Sbjct: 319 NCIRCGACMNHCPVYTRIGGQAYGTVYPGPIGKII-------SPHLMGLENTPDHPSASS 371 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + R Sbjct: 372 LCGACGEVCPVKIPIPALLRRLREENVKR 400 >gi|312891079|ref|ZP_07750602.1| protein of unknown function DUF162 [Mucilaginibacter paludis DSM 18603] gi|311296387|gb|EFQ73533.1| protein of unknown function DUF162 [Mucilaginibacter paludis DSM 18603] Length = 461 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 9/92 (9%) Query: 169 ECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP Y Y P R E +L L Sbjct: 310 YCIRCGACLNACPIYKNVGGHTYNTPYSGPIGSVITPHMRGM---EDFKHLSFASSL--- 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C++ CP ++ K + + + K+ Sbjct: 364 --CGRCSEVCPVKIDIHKMLLLNRRDAVKDKL 393 >gi|254372946|ref|ZP_04988435.1| hypothetical protein FTCG_00517 [Francisella tularensis subsp. novicida GA99-3549] gi|151570673|gb|EDN36327.1| hypothetical protein FTCG_00517 [Francisella novicida GA99-3549] Length = 936 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLLNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 555 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VDINTGSFIKDLRAEQNKANI 631 >gi|331642877|ref|ZP_08344012.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H736] gi|331653682|ref|ZP_08354683.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli M718] gi|331039675|gb|EGI11895.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H736] gi|331048531|gb|EGI20607.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli M718] Length = 421 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|291544141|emb|CBL17250.1| hypothetical protein RUM_10970 [Ruminococcus sp. 18P13] Length = 130 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R +C+ C CS +CPS Y + +++++ + ++ L Sbjct: 14 RMSGVNPRKCMRCGKCSGTCPS-------YDEMEYHPHQFVYMVENGE------IEALMQ 60 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y+C + C CP+G+ PAK + +++ ++ K Sbjct: 61 SDSIYKCLSCFACVDRCPRGVEPAKLVEALRLTVIREK 98 >gi|296109182|ref|YP_003616131.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus infernus ME] gi|295433996|gb|ADG13167.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus infernus ME] Length = 196 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + + C C C+ CPS + R L + L+ Y+++ Sbjct: 25 EEEVVKSFRRCYQCGTCTGGCPSGRHTAYRVRVLIRSALMGFYKYI-------------- 70 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + L+ C T C + CP+ + + I ++ + Sbjct: 71 --ESEDLWMCTTCYTCYERCPRDVKITEIIKAMRNLAAR 107 >gi|331647898|ref|ZP_08348990.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli M605] gi|331043622|gb|EGI15760.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli M605] Length = 421 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|293405712|ref|ZP_06649704.1| glpC [Escherichia coli FVEC1412] gi|298381394|ref|ZP_06990993.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli FVEC1302] gi|291427920|gb|EFF00947.1| glpC [Escherichia coli FVEC1412] gi|298278836|gb|EFI20350.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli FVEC1302] Length = 421 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|227874853|ref|ZP_03993006.1| iron-sulfur cluster-binding protein [Mobiluncus mulieris ATCC 35243] gi|227844628|gb|EEJ54784.1| iron-sulfur cluster-binding protein [Mobiluncus mulieris ATCC 35243] Length = 532 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 357 RCIRCSACLNICPVYEKVGGHAYGSVYPGPIGAI----LNPQLRGVCST------VDRSL 406 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP + + ++ +++ K Sbjct: 407 PFASTLCGACVEVCPVRIPFTDILVDLRRKVVEVK 441 >gi|197123466|ref|YP_002135417.1| hypothetical protein AnaeK_3066 [Anaeromyxobacter sp. K] gi|196173315|gb|ACG74288.1| protein of unknown function DUF162 [Anaeromyxobacter sp. K] Length = 458 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 8/88 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + + I L RD L + Sbjct: 302 CIRCGACMNTCPVFRRSGGYSYAWTIPGPIGSVLAPGRDPAAHGSLP--------FASSL 353 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +C CP + + + ++ Sbjct: 354 CGSCDAVCPVKIPLHDQLLARRREVVRA 381 >gi|228913964|ref|ZP_04077588.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926425|ref|ZP_04089497.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944993|ref|ZP_04107354.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120934|ref|ZP_04250176.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus 95/8201] gi|228662594|gb|EEL18192.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus 95/8201] gi|228814662|gb|EEM60922.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833249|gb|EEM78814.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845686|gb|EEM90713.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 417 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|146312449|ref|YP_001177523.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Enterobacter sp. 638] gi|145319325|gb|ABP61472.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Enterobacter sp. 638] Length = 396 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 26/96 (27%), Gaps = 10/96 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTVCPVSSVNP-HYPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP + I + + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAQYSKQ 86 >gi|237704719|ref|ZP_04535200.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia sp. 3_2_53FAA] gi|26109035|gb|AAN81238.1|AE016763_197 Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli CFT073] gi|91073109|gb|ABE07990.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia coli UTI89] gi|226901085|gb|EEH87344.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Escherichia sp. 3_2_53FAA] Length = 421 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|331673754|ref|ZP_08374517.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA280] gi|331069027|gb|EGI40419.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli TA280] Length = 421 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|307637356|gb|ADN79806.1| Putative oxidoreductase [Helicobacter pylori 908] gi|325995948|gb|ADZ51353.1| Putative oxidoreductase,ferredoxin-type protein [Helicobacter pylori 2018] gi|325997542|gb|ADZ49750.1| Glycerol 3-phosphate dehydrogenase [Helicobacter pylori 2017] Length = 433 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C SC Y + D P L ++ + LE C Sbjct: 17 CVKCAKCVPSCTIYRIHKDEATSPRGFLDLMHLNAQNKLQLDANLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|229029065|ref|ZP_04185164.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH1271] gi|228732345|gb|EEL83228.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus AH1271] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIAIMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|298372950|ref|ZP_06982940.1| iron-sulfur cluster binding protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275854|gb|EFI17405.1| iron-sulfur cluster binding protein [Bacteroidetes oral taxon 274 str. F0058] Length = 459 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 19/133 (14%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + SHF H+ E V + + C+ C C +CP Y Sbjct: 263 ITTYTSHFGRPHKGGEQHFIIVDNG-----RSKILGMPQHHKVMNCIRCGACMNTCPVYR 317 Query: 185 WNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + Y P + L D + + + C ++C+ CP + Sbjct: 318 RSGGYSYSYFIPGPIGINLGMLHDPQ-----------KHSGNVSACSLCLSCSYVCPAMV 366 Query: 242 NPAKAIAKIKMML 254 + + I + L Sbjct: 367 DLGEQIYIWRQKL 379 >gi|297569602|ref|YP_003690946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925517|gb|ADH86327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 188 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R + L C C CS +CP D P L+ R + R L Sbjct: 18 ARPGGEHLNRCYSCGACSGACPVSQAIPD--FDPRRLIHMIRMGLKER----------LL 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C +C CP+ + A+ + ++ + L++ + Sbjct: 66 SSELLSYCSGCRSCVFVCPQDVKFAEIVGALRELALEQGL 105 Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 9/98 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + E + L C C C CP ++ A ++ A R L + Sbjct: 54 HMIRMGLKERLLSSELLSYCSGCRSCVFVCP----QDVKF---AEIVGALRELALEQGLL 106 Query: 211 QGERLDNLEDPFRLYR--CHTIMNCTQSCPKGLNPAKA 246 E L + R C + + C + CP + Sbjct: 107 TEEDLLARGKAAWVERDQCVSCLTCVRVCPWRIPVIDQ 144 >gi|229183587|ref|ZP_04310810.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BGSC 6E1] gi|228599830|gb|EEK57427.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BGSC 6E1] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|227827382|ref|YP_002829161.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.14.25] gi|229578888|ref|YP_002837286.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus Y.G.57.14] gi|229584597|ref|YP_002843098.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.16.27] gi|238619538|ref|YP_002914363.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.16.4] gi|284997493|ref|YP_003419260.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus L.D.8.5] gi|227459177|gb|ACP37863.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.14.25] gi|228009602|gb|ACP45364.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus Y.G.57.14] gi|228019646|gb|ACP55053.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.16.27] gi|238380607|gb|ACR41695.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus M.16.4] gi|284445388|gb|ADB86890.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus L.D.8.5] gi|323474436|gb|ADX85042.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus REY15A] gi|323477173|gb|ADX82411.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus HVE10/4] Length = 280 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP D+ D+ + + K D + + L C+ Sbjct: 9 PLPDDPRFLDMSYDVQGPLPEEERNLLSNLKPEDREVAIKFWEAVKSDFRYDEYLRGCLN 68 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + D D+ +++ C Sbjct: 69 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDEVDKIWEFV------NKKVWACVQCYT 117 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 118 CSMRCPFNNEIAGLIMVLREYAVK 141 >gi|229582358|ref|YP_002840757.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus Y.N.15.51] gi|228013074|gb|ACP48835.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus Y.N.15.51] Length = 280 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP D+ D+ + + K D + + L C+ Sbjct: 9 PLPDDPRFLDMSYDVQGPLPEEERNLLSNLKPEDREVAIKFWEAVKSDFRYDEYLRGCLN 68 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + D D+ +++ C Sbjct: 69 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDEVDKIWEFV------NKKVWACVQCYT 117 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 118 CSMRCPFNNEIAGLIMVLREYAVK 141 >gi|256371756|ref|YP_003109580.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008340|gb|ACU53907.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 437 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 15/89 (16%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C CP +G + +R + NL + +L+ Sbjct: 64 LEWCYGCGKCVPVCPV------DLVGEYGPRKLHRMVQTG---------TNLFEADQLWM 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C T NC + CPK +N + + ++ + + Sbjct: 109 CTTCGNCLRVCPKQVNMIQIMPAVREVAV 137 >gi|228932675|ref|ZP_04095549.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826993|gb|EEM72753.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|229172034|ref|ZP_04299599.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus MM3] gi|228611377|gb|EEK68634.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus MM3] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|329925758|ref|ZP_08280544.1| iron-sulfur cluster-binding protein [Paenibacillus sp. HGF5] gi|328939638|gb|EGG35983.1| iron-sulfur cluster-binding protein [Paenibacillus sp. HGF5] Length = 506 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 41/157 (26%), Gaps = 7/157 (4%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL-LQSHEDR 161 + LP + + L V MS R ++ + Sbjct: 246 IPSWSDLEVMATLLPRSATGQKLTVYMSGISGPKRELDADGPDEMHIIIIDNGRSLQLGD 305 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP Y G L + ++ E D Sbjct: 306 PEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALNKNVAEWDDIANAS 365 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++CP + + ++ ++ Sbjct: 366 ------SLCGACYEACPVKIPLHDMLVSLRRRKIEAG 396 >gi|268589519|ref|ZP_06123740.1| electron transport complex protein RnfC [Providencia rettgeri DSM 1131] gi|291315188|gb|EFE55641.1| electron transport complex protein RnfC [Providencia rettgeri DSM 1131] Length = 781 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 33/120 (27%), Gaps = 28/120 (23%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L+ + E+ C+ C C +CP+ Y D ++ Sbjct: 358 CNCLLVPTMEEMGPKALEEACIRCGLCVDACPAGLLPQQLYWFSKG---------DEHEK 408 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----------AIAKIKMMLLDRKI 259 Q L+ C C CP + + IA+ + + K+ Sbjct: 409 AQK---------HNLFDCIECGACAYVCPSNIPLVQYYRQEKAEIREIAQEERRAAEAKL 459 >gi|261407742|ref|YP_003243983.1| iron-sulfur cluster-binding protein [Paenibacillus sp. Y412MC10] gi|261284205|gb|ACX66176.1| iron-sulfur cluster binding protein [Paenibacillus sp. Y412MC10] Length = 506 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 41/157 (26%), Gaps = 7/157 (4%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL-LQSHEDR 161 + LP + + L V MS R ++ + Sbjct: 246 IPSWSDLEVMATLLPRSATGQKLTVYMSGISGPKRELDADGPDEMHIIIIDNGRSLQLGD 305 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP Y G L + ++ E D Sbjct: 306 PEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALNKNVAEWDDIANAS 365 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++CP + + ++ ++ Sbjct: 366 ------SLCGACYEACPVKIPLHDMLVSLRRRKIEAG 396 >gi|118497582|ref|YP_898632.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. novicida U112] gi|195536279|ref|ZP_03079286.1| oxidoreductase, FAD-binding [Francisella tularensis subsp. novicida FTE] gi|118423488|gb|ABK89878.1| 4Fe-4S ferredoxin, FAD dependent [Francisella novicida U112] gi|194372756|gb|EDX27467.1| oxidoreductase, FAD-binding [Francisella tularensis subsp. novicida FTE] Length = 936 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLLNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 555 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VDINTGSFIKDLRAEQNKANI 631 >gi|326796152|ref|YP_004313972.1| electron transport complex, RnfABCDGE type, C subunit [Marinomonas mediterranea MMB-1] gi|326546916|gb|ADZ92136.1| electron transport complex, RnfABCDGE type, C subunit [Marinomonas mediterranea MMB-1] Length = 1029 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 41/198 (20%) Query: 82 EGICGSCGMNID----GTNTLACVKDM--KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+C D G + + + V L V L + Sbjct: 269 CQNVGTCTAIYDAIYHGKPLITRYTTLTGDAFEAPQNVEVLLGTPVSHLLEYAGTIDKKL 328 Query: 136 HRSIEPWLKTVSPKPAKELL----------QSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +R + A + S ++ + C+ C C +CP+ Sbjct: 329 NRLVMGGPMMGFTLNADTVPVVKTTNCILAASKKELPEPAPEQPCIRCGMCEQACPA--- 385 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 ++L Q W S++ + E + L+ C C+ CP + + Sbjct: 386 --------SLLPQQLLWFSKSQEHEKAEHYN-------LFDCIECGACSYVCPSSIPLVQ 430 Query: 246 -------AIAKIKMMLLD 256 I + K + Sbjct: 431 YYRHTKAEIREAKEAAVK 448 >gi|288940310|ref|YP_003442550.1| RnfABCDGE type electron transport complex subunit C [Allochromatium vinosum DSM 180] gi|288895682|gb|ADC61518.1| electron transport complex, RnfABCDGE type, C subunit [Allochromatium vinosum DSM 180] Length = 528 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 18/108 (16%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + ++ L + E+ C+ C C+ CP+ +L Sbjct: 353 ELRESATPITKATNCVLALAPEEAPDPGPALACIRCGRCAEVCPT-----------RLLP 401 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 Q W ++D LD ++D + L+ C C Q CP + + Sbjct: 402 QQMYWNARAKD------LDRVQD-YNLFDCIECGCCAQVCPSHIPLVQ 442 >gi|239617294|ref|YP_002940616.1| electron transport complex, RnfABCDGE type, C subunit [Kosmotoga olearia TBF 19.5.1] gi|239506125|gb|ACR79612.1| electron transport complex, RnfABCDGE type, C subunit [Kosmotoga olearia TBF 19.5.1] Length = 440 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 18/90 (20%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 ++ + C+ C C +CP Y YL RL Sbjct: 352 MTKEVVGERESFPCIRCGGCVKACPMYLQPFQLYLY------------------TSNRLY 393 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + L C +C+ CP ++ K+ Sbjct: 394 DRAVDEGLMDCMECGSCSYVCPANIDLVKS 423 >gi|297625168|ref|YP_003706602.1| iron-sulfur cluster binding protein [Truepera radiovictrix DSM 17093] gi|297166348|gb|ADI16059.1| iron-sulfur cluster binding protein [Truepera radiovictrix DSM 17093] Length = 477 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 9/91 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 C+ C+ C CP Y G L +L LE+ L Y Sbjct: 317 HCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAIL--------TPQLRGLENAPSLPYAS 368 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP +N + + ++ ++D + Sbjct: 369 SLCGACFEVCPVKINIPEVLVHLRARVVDAQ 399 >gi|256828825|ref|YP_003157553.1| hypothetical protein Dbac_1023 [Desulfomicrobium baculatum DSM 4028] gi|256578001|gb|ACU89137.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfomicrobium baculatum DSM 4028] Length = 436 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C++C C+ CP + R L + +D + Sbjct: 18 RFDFSACMVCGSCANGCPVTGTPGMAGWDTR---KVMRMLANGL-------VDEVVASDF 67 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C CP G++ + +K Sbjct: 68 PWLCTGCGRCAGVCPAGIDIPSVMGHMK 95 >gi|110632729|ref|YP_672937.1| iron-sulfur cluster binding protein [Mesorhizobium sp. BNC1] gi|110283713|gb|ABG61772.1| iron-sulfur cluster binding protein [Chelativorans sp. BNC1] Length = 478 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 35/138 (25%), Gaps = 9/138 (6%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +D+ V + R +P + +S + + C+ C C CP Sbjct: 267 QDMSVYTTVSTGPRRPGDPDGPEEYHVVLVDNGRSSMLGTEFQDMLRCIRCGACMNHCPV 326 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 Y G L S + L N C CP + Sbjct: 327 YHAVGGHAYGWVYPGPMGAVLTPSLVGVEKAGHLPNAS--------TFCGRCESVCPMRI 378 Query: 242 NPAKAIAKIKMMLLDRKI 259 K + + R + Sbjct: 379 PLPKMMRHWREREFSRGL 396 >gi|90420729|ref|ZP_01228635.1| formate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90335020|gb|EAS48781.1| formate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 931 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 33/178 (18%) Query: 82 EGICGSCGMNIDGTNTLACV--------------KDMKDIKGAIAVYPL-PHMSVIKDLV 126 +G C +C + IDG LA + + V L +M ++ Sbjct: 47 DGNCRACMVEIDGERVLAASCIRKPAGGMVVRTATERAVKSRQMVVELLASNMRPPEESP 106 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLYECVMCACCSTSCPS 182 + S F+ S+ P + + E + + C+ C C +C Sbjct: 107 DNQSMFWDWASSMGVAGSDRYPSKFADGHAAAEFDVTNPAIAVNMDACITCGACVRACRE 166 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP L C T C Q+CP G Sbjct: 167 VQVND--VIGMAERGNRSVPVFD------------IHDPMGLSTCVTCGECVQACPTG 210 >gi|48478118|ref|YP_023824.1| oxidoreductase [Picrophilus torridus DSM 9790] gi|48430766|gb|AAT43631.1| hypothetical oxidoreductase [Picrophilus torridus DSM 9790] Length = 387 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 10/99 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D + +C+ C C + CP+ + + G + ++ D L Sbjct: 1 MKPEDIVSKCIKCGFCESVCPTLPASGFNPIFGARGRVILANNILSGED---------LN 51 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C CP G+N + ++ LL Sbjct: 52 GLDSFYSCLECNACINVCPAGINAGEVSHLMRYNLLKNG 90 >gi|325969841|ref|YP_004246033.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] gi|323709044|gb|ADY02531.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 371 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 13/93 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C C C+ +CP + P +++ ++ D L Sbjct: 18 FDISACYSCGVCTATCPLAQEGHE---FPRKIIRYAILGLE----------DKLISSTEP 64 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C+ CT+SCP+G +PA + ++ L R Sbjct: 65 WLCYYCGECTESCPRGADPAGFMMAVRRYLTTR 97 >gi|229195591|ref|ZP_04322357.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus m1293] gi|228587840|gb|EEK45892.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus m1293] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|297565536|ref|YP_003684508.1| iron-sulfur cluster binding protein [Meiothermus silvanus DSM 9946] gi|296849985|gb|ADH63000.1| iron-sulfur cluster binding protein [Meiothermus silvanus DSM 9946] Length = 463 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 30/101 (29%), Gaps = 19/101 (18%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV C C +CP Y Y GP + A + LE Sbjct: 306 WETLRCVRCGACLNACPVYRQTGGHAYGYVYSGPIGAVLAPGLV-------------GLE 352 Query: 220 DPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L Y C + CP + K + + ++ + Sbjct: 353 ETQPLPYASSLCGACYEVCPVKIPIPKLLLAWRQRAVEENL 393 >gi|320093897|ref|ZP_08025736.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinomyces sp. oral taxon 178 str. F0338] gi|319979166|gb|EFW10670.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinomyces sp. oral taxon 178 str. F0338] Length = 430 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 14/94 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAIL-LQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L CV C C T+CP D + GP QA R+ R + Sbjct: 34 LDACVKCTICETNCPVMRVT-DLFGGPKYSGPQAERF-----------RQKGQIVDKSID 81 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C+ CP+G+ + I + + R + Sbjct: 82 YCSSCGTCSLVCPQGVKVTEIIHH-RRTDMKRAV 114 >gi|293446586|ref|ZP_06663008.1| glycerol-3-phosphate dehydrogenase [Escherichia coli B088] gi|331678195|ref|ZP_08378870.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H591] gi|332278604|ref|ZP_08391017.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Shigella sp. D9] gi|291323416|gb|EFE62844.1| glycerol-3-phosphate dehydrogenase [Escherichia coli B088] gi|331074655|gb|EGI45975.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Escherichia coli H591] gi|332100956|gb|EGJ04302.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Shigella sp. D9] Length = 421 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 26/101 (25%), Gaps = 10/101 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 C+ C C+T+CP N Y GP D + Sbjct: 18 CPTRRRPTMNDTSFENCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLR 67 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L C C +CP + I + + Sbjct: 68 LKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 108 >gi|229138081|ref|ZP_04266679.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BDRD-ST26] gi|228645426|gb|EEL01660.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus BDRD-ST26] Length = 417 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|170290801|ref|YP_001737617.1| hypothetical protein Kcr_1188 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174881|gb|ACB07934.1| protein of unknown function DUF224 cysteine-rich region domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 359 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP + + G ++ L + E L + ++ Sbjct: 12 DFARCIGCGGCNIPCPLFNIDQTESSGMRSRIKILSMLSKGKIELTEGILRH------VF 65 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP GL P + + + Sbjct: 66 TCANCGVCNEYCPVGLRPFDLLVRAR 91 >gi|241663202|ref|YP_002981562.1| hypothetical protein Rpic12D_1606 [Ralstonia pickettii 12D] gi|240865229|gb|ACS62890.1| protein of unknown function DUF162 [Ralstonia pickettii 12D] Length = 469 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP + + + ++ ++R++ Sbjct: 361 -----------TLCGECNRVCPASIPLSDLLRTLREKQMEREL 392 >gi|148658536|ref|YP_001278741.1| iron-sulfur cluster binding protein [Roseiflexus sp. RS-1] gi|148570646|gb|ABQ92791.1| iron-sulfur cluster binding protein [Roseiflexus sp. RS-1] Length = 470 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 36/139 (25%), Gaps = 16/139 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY- 183 L V S R EP + +S C+ C C +CP Y Sbjct: 265 LSVYTSIISGPRRPHEPDGPDEFHLVLLDNRRSEIIGGPYAEALMCIRCGACLNACPVYQ 324 Query: 184 ----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 Y GP + D D + +L C +CP Sbjct: 325 SIGGHAYGGVYSGPIGAILTPLLQPDLPDAHKLPHASSL-----------CGACEWACPV 373 Query: 240 GLNPAKAIAKIKMMLLDRK 258 + + +++ + Sbjct: 374 RIAIPDLLLRLRADAVKNG 392 >gi|291279731|ref|YP_003496566.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] gi|290754433|dbj|BAI80810.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] Length = 708 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 17/144 (11%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + LP + + + ++ + K V S + + +C+ Sbjct: 247 IRALPKSATGQIISTYVTWISGSYPIDSNKNKEVHFVFLDNGRLSIFKNENLKEALKCIR 306 Query: 173 CACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C+ CP Y D Y+G L+ + DE + + L C Sbjct: 307 CGSCANVCPVYEKVGGHVFGDTYVGAIGLILTSFY----GDEKKANEILKL--------C 354 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C+++CP G++ I+ I Sbjct: 355 IGCRTCSENCPAGIDLQSLISDIN 378 >gi|257465681|ref|ZP_05630052.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor 202] gi|257451341|gb|EEV25384.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor 202] Length = 60 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +R+ L ++ C + C++ CPK + PA AI + K Sbjct: 2 TGREQRMKLLSSQNGVWSCTFVGYCSEVCPKHVGPASAINQGK 44 >gi|15679866|ref|NP_276984.1| heterodisulfide reductase, subunit C [Methanothermobacter thermautotrophicus str. Delta H] gi|2623016|gb|AAB86344.1| heterodisulfide reductase, subunit C [Methanothermobacter thermautotrophicus str. Delta H] Length = 325 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS G + + + + D + L+ Sbjct: 172 LEYCFQCGTCTGSCPS---------GRRTPYRVRQIIR----KANVGLKDEIISDPALWM 218 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T +C + CP+ + + + Sbjct: 219 CTTCYSCQERCPRKVKIVDVVKLARNEAAKAG 250 >gi|298675372|ref|YP_003727122.1| CoB/CoM heterodisulfide reductase subunit C [Methanohalobium evestigatum Z-7303] gi|298288360|gb|ADI74326.1| CoB/CoM heterodisulfide reductase, subunit C [Methanohalobium evestigatum Z-7303] Length = 164 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 14/90 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C CS SCPS G + L + + + + L D L+ C Sbjct: 19 KCMQCGVCSGSCPS---------GRHMSLNIRKIIK----KAYSNDRNILTDKD-LWMCT 64 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+G+ + KI+ + + Sbjct: 65 TCYTCQERCPRGIKIVDGVYKIRNVAVREG 94 >gi|283834974|ref|ZP_06354715.1| iron-sulfur cluster-binding protein [Citrobacter youngae ATCC 29220] gi|291069251|gb|EFE07360.1| iron-sulfur cluster-binding protein [Citrobacter youngae ATCC 29220] Length = 475 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + + D Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKDLP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + +K I + + ++ + I Sbjct: 364 LCTACDSVCPVRIPLSKLILRHRRVMAEEGI 394 >gi|227549922|ref|ZP_03979971.1| iron-sulfur cluster-binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078018|gb|EEI15981.1| iron-sulfur cluster-binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 467 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 5/89 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C CP + G L + E L + Sbjct: 314 HCIRCSACLNVCPVFEHVGGHAYGSTYPGPIGAILSPQLTGIESEANATLP-----FAST 368 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CP +N + ++ +++ Sbjct: 369 LCGACYDVCPVKINIPDILVHLRAEAVEK 397 >gi|238750702|ref|ZP_04612201.1| hypothetical protein yrohd0001_9580 [Yersinia rohdei ATCC 43380] gi|238711092|gb|EEQ03311.1| hypothetical protein yrohd0001_9580 [Yersinia rohdei ATCC 43380] Length = 406 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C+T CP N Y GP D + D Sbjct: 1 MARDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALY 50 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 51 DEALKYCTNCKRCEVACPSDVKIGDIIQRAK 81 >gi|86156763|ref|YP_463548.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773274|gb|ABC80111.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 121 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 11/89 (12%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + + GP +L A + G+ + C + Sbjct: 35 CMECELCMGACPLCAKRGEAFPGPKGILAAAK---------TGKVEAAI--AAGALDCTS 83 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT+ CP+GL P + + + Sbjct: 84 CGACTRVCPRGLAPQVEVERWRAAAEREG 112 >gi|332560814|ref|ZP_08415132.1| 4Fe-4S ferredoxin, RnfC [Rhodobacter sphaeroides WS8N] gi|332274612|gb|EGJ19928.1| 4Fe-4S ferredoxin, RnfC [Rhodobacter sphaeroides WS8N] Length = 517 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP G R I S D R+ L C Sbjct: 379 MPCIRCGRCAQACPV---------GLTPFELNAR--IQSEDLEGAGRI-------GLLDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C+ +CP L + I K L + Sbjct: 421 ITCGCCSFTCPSNLPLVQTIHYAKGKLAEA 450 >gi|238760158|ref|ZP_04621305.1| hypothetical protein yaldo0001_730 [Yersinia aldovae ATCC 35236] gi|238701594|gb|EEP94164.1| hypothetical protein yaldo0001_730 [Yersinia aldovae ATCC 35236] Length = 422 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 29/105 (27%), Gaps = 10/105 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + + C+ C C+T CP N Y GP Sbjct: 2 PKHGESKTLPQEHHLPRDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------G 51 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 52 PDGERLRLKDPALYDEALKYCTNCKRCEVACPSDVKIGDIIQRAK 96 >gi|221369207|ref|YP_002520303.1| Electron transport complex, RnfABCDGE type, D subunit [Rhodobacter sphaeroides KD131] gi|221162259|gb|ACM03230.1| Electron transport complex, RnfABCDGE type, D subunit [Rhodobacter sphaeroides KD131] Length = 517 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP G R I S D R+ L C Sbjct: 379 MPCIRCGRCAQACPV---------GLTPFELNAR--IQSEDLEGAGRI-------GLLDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C+ +CP L + I K L + Sbjct: 421 ITCGCCSFTCPSNLPLVQTIHYAKGKLAEA 450 >gi|77465208|ref|YP_354711.1| 4Fe-4S ferredoxin, RnfC [Rhodobacter sphaeroides 2.4.1] gi|77389626|gb|ABA80810.1| 4Fe-4S ferredoxin, RnfC [Rhodobacter sphaeroides 2.4.1] Length = 517 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP G R I S D R+ L C Sbjct: 379 MPCIRCGRCAQACPV---------GLTPFELNAR--IQSEDLEGAGRI-------GLLDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C+ +CP L + I K L + Sbjct: 421 ITCGCCSFTCPSNLPLVQTIHYAKGKLAEA 450 >gi|126464670|ref|YP_001045783.1| electron transport complex, RnfABCDGE type, C subunit [Rhodobacter sphaeroides ATCC 17029] gi|126106481|gb|ABN79011.1| electron transport complex, RnfABCDGE type, C subunit [Rhodobacter sphaeroides ATCC 17029] Length = 517 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP G R I S D R+ L C Sbjct: 379 MPCIRCGRCAQACPV---------GLTPFELNAR--IQSEDLEGAGRI-------GLLDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C+ +CP L + I K L + Sbjct: 421 ITCGCCSFTCPSNLPLVQTIHYAKGKLAEA 450 >gi|225181279|ref|ZP_03734724.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dethiobacter alkaliphilus AHT 1] gi|225168059|gb|EEG76865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dethiobacter alkaliphilus AHT 1] Length = 325 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C +CP+ + + RW+ + D + Sbjct: 205 YWTRQFDRCIRCFACRNTCPACNCRTCVFDQAEP-----RWIGKASDMADTLNYHIIRAF 259 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC+ C + CP G+ ++ L+ Sbjct: 260 HVAGRCYECGECERICPAGIPL----QELNRKLIK 290 >gi|322369074|ref|ZP_08043640.1| FAD-linked oxidase domain protein [Haladaptatus paucihalophilus DX253] gi|320551297|gb|EFW92945.1| FAD-linked oxidase domain protein [Haladaptatus paucihalophilus DX253] Length = 993 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 44/147 (29%), Gaps = 12/147 (8%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V +D + R + S + ++ + C C C Sbjct: 539 PGTVVFRD------EDGADMREHLRYGPEYSSLEPTTVQDFSDEGGFSHLVELCNGCGTC 592 Query: 177 S-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 T CPSY D R I S + E + L C Sbjct: 593 RQTGSETMCPSYRGMKDEMATTRGRANMLRAAI-SGEIPTEELYTDRFQEEVLDLCLGCK 651 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP G++ AK A++K + + Sbjct: 652 GCARDCPTGVDLAKLKAEVKHAHHEER 678 >gi|304407108|ref|ZP_07388762.1| iron-sulfur cluster binding protein [Paenibacillus curdlanolyticus YK9] gi|304344095|gb|EFM09935.1| iron-sulfur cluster binding protein [Paenibacillus curdlanolyticus YK9] Length = 508 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 6/93 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C+ C C +CP Y G L + + E D Sbjct: 309 FQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALQKNVAEWDDIANAS-- 366 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C ++CP + + ++ ++ Sbjct: 367 ----SLCGACYEACPVKIPLHDMLVYLRRRKVE 395 >gi|302348414|ref|YP_003816052.1| NAD(P)+-dependent formate dehydrogenase, alpha subunit [Acidilobus saccharovorans 345-15] gi|302328826|gb|ADL19021.1| NAD(P)+-dependent formate dehydrogenase, alpha subunit [Acidilobus saccharovorans 345-15] Length = 718 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 21/175 (12%) Query: 72 PTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVV 127 P+L R G C C + + G + + + H VI ++ Sbjct: 32 PSLCYDERLSPYGSCRLCLVEVKGRGLVTACTTYVQDGMEVSTETPEVVEHRKVILGMLA 91 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK--IDGLYECVMCACCSTSCPSYWW 185 + ++ R E + + +E + +D CV+C C C Sbjct: 92 ERHPRDARGRLAELFKRYGVEPGGEERPELVDDSHPLLRFDFSRCVLCYSCVRVC----- 146 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D Y+G I YR Q + F C + C CP G Sbjct: 147 --DEYIGRLIWRAMYR--------GQQTVVIPETGKFGTSSCISCRACVDVCPSG 191 >gi|157377055|ref|YP_001475655.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319429|gb|ABV38527.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 457 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A D D + Sbjct: 306 KCIRCGGCLNTCPVYRRSGGHSYNYTIPGPIGIAVGAQND--------------DTNSIP 351 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +C+ CP + K I + + + Sbjct: 352 WACTLCGSCSYVCPTKVPLDKIIHHHRRLKAEAG 385 >gi|283851313|ref|ZP_06368595.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio sp. FW1012B] gi|283573263|gb|EFC21241.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio sp. FW1012B] Length = 399 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 13/84 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C CA CS +CP P + +W + +R + D ++ CH Sbjct: 27 KCYQCATCSVACP---LAPPENPFPRKEMVWAQWGL-------KDRFEGDID---IWLCH 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKM 252 C++ CP+G P IA I+ Sbjct: 74 NCQTCSELCPRGARPGDLIAAIRN 97 >gi|256839528|ref|ZP_05545037.1| iron-sulfur cluster-binding protein [Parabacteroides sp. D13] gi|256738458|gb|EEU51783.1| iron-sulfur cluster-binding protein [Parabacteroides sp. D13] Length = 455 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + + + + ++L + C+ C C +CP Y Sbjct: 263 ITSYTSHYRRPSEGQEFHIIIVDNGRSDILAKPD----HIRTLNCIRCGECMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L + E + C ++C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVSACSLCLSCSNVCPVKID 367 Query: 243 PAKAIAKIKMML 254 + I + + L Sbjct: 368 LGEQIYRWRQDL 379 >gi|228984469|ref|ZP_04144646.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229154961|ref|ZP_04283075.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus ATCC 4342] gi|228628519|gb|EEK85232.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus ATCC 4342] gi|228775172|gb|EEM23561.1| Glycolate oxidase, iron-sulfur subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 417 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|167855497|ref|ZP_02478260.1| hypothetical protein HPS_04167 [Haemophilus parasuis 29755] gi|219870900|ref|YP_002475275.1| iron-sulfur cluster binding reductase [Haemophilus parasuis SH0165] gi|167853363|gb|EDS24614.1| hypothetical protein HPS_04167 [Haemophilus parasuis 29755] gi|219691104|gb|ACL32327.1| iron-sulfur cluster binding reductase [Haemophilus parasuis SH0165] Length = 468 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 45/177 (25%), Gaps = 11/177 (6%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + G LA + + + L +V L + E Sbjct: 229 TTVPKTHIAVMGMERLAPT----FQEVDVLITMLARSAVGAKLTAYNTWLTGPRLEGETD 284 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + +S + + C+ C C +CP+Y G Sbjct: 285 GPEEFHLVIVDNGRSKILESEFKEVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSV 344 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + E + Y C C CP + A+ I K + + + Sbjct: 345 IS-PLLGGYEEFKELP------YACSLCTACNSVCPVKIPLAQLILKHREHIAQNGM 394 >gi|320352901|ref|YP_004194240.1| putative adenylylsulfate reductase-associated electron transfer protein QmoC [Desulfobulbus propionicus DSM 2032] gi|320121403|gb|ADW16949.1| putative adenylylsulfate reductase-associated electron transfer protein QmoC [Desulfobulbus propionicus DSM 2032] Length = 402 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP +SD P + +W + D L ++ Sbjct: 23 LKKCYQCATCSVACP---LSSDDNPFPRKQMILAQWGL----------KDKLISDANIFL 69 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH +CT+ CP+G P + I+ Sbjct: 70 CHQCGDCTEMCPRGARPGDVLGAIRSYAYR 99 >gi|311278790|ref|YP_003941021.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Enterobacter cloacae SCF1] gi|308747985|gb|ADO47737.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Enterobacter cloacae SCF1] Length = 396 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MNDTRFESCIKCTVCTTACPVSRVNPR-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARADY 83 >gi|301064293|ref|ZP_07204727.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300441572|gb|EFK05903.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 390 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 12/105 (11%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + + C+ C C+ SCP P +++ RD Sbjct: 8 HPHYQKAEQTMQLTEKQIDYCMECGVCTGSCPVNKVLPT--FSPRQMIKKAL-----RDP 60 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LD L+ C C+ CP ++ + + ++ Sbjct: 61 EGDPYLDP-----GLWACLGCARCSTRCPVEIDFPEFVRYLRRKA 100 >gi|298375227|ref|ZP_06985184.1| iron-sulfur cluster binding protein [Bacteroides sp. 3_1_19] gi|298267727|gb|EFI09383.1| iron-sulfur cluster binding protein [Bacteroides sp. 3_1_19] Length = 455 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Y + + + + ++L + C+ C C +CP Y Sbjct: 263 ITSYTSHYRRPSEGQEFHIIIVDNGRSDILAKPD----HIRTLNCIRCGECMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L + E + C ++C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVSACSLCLSCSNVCPVKID 367 Query: 243 PAKAIAKIKMML 254 + I + + L Sbjct: 368 LGEQIYRWRQDL 379 >gi|149908415|ref|ZP_01897078.1| Fe-S oxidoreductase [Moritella sp. PE36] gi|149808578|gb|EDM68513.1| Fe-S oxidoreductase [Moritella sp. PE36] Length = 402 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 10/94 (10%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C+ CP N + Y GP L E+ E L Sbjct: 7 RFEKCIKCTICTVYCPVAKANPN-YPGPKESGPDGERLRIKSPEYYDEALKL-------- 57 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP +N IA + +K+ Sbjct: 58 -CTNCKRCETACPSNVNVGDIIAVARGKFEKKKL 90 >gi|194335215|ref|YP_002017009.1| heterodisulfide reductase, putative [Pelodictyon phaeoclathratiforme BU-1] gi|194307692|gb|ACF42392.1| heterodisulfide reductase, putative [Pelodictyon phaeoclathratiforme BU-1] Length = 393 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + +C CA CS CP + D P + +W + + E L + + Sbjct: 18 KAAGADTMKKCYQCATCSVVCP---LSPDDRPFPRKEMVMAQWGL------KDELLKSAD 68 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ CH +C++ CP+G P +A ++ ++ Sbjct: 69 ----IWLCHNCNDCSKYCPRGARPGDVLAILRKSVIQE 102 >gi|283457980|ref|YP_003362587.1| FAD/FMN-containing dehydrogenase [Rothia mucilaginosa DY-18] gi|283134002|dbj|BAI64767.1| FAD/FMN-containing dehydrogenase [Rothia mucilaginosa DY-18] Length = 969 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 7/120 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + ++ + + + CV C C CPS L P Sbjct: 521 KGFMNPGVLITEPDTDYVTDLKVAETVEEEVDRCVECGYCEPVCPSRNLT----LTPRQR 576 Query: 197 LQAYRWLID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + + D ERL + + + C C CP +N I +++ Sbjct: 577 IVLRREIAAAEVNGDHELAERLRKEYEYYGIETCAVDGMCQTRCPVNINTGDLIRRLRSE 636 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 4/42 (9%) Query: 221 PFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDRKI 259 + RC C CP L P + I ++ + ++ Sbjct: 548 EEEVDRCVECGYCEPVCPSRNLTLTPRQRIV-LRREIAAAEV 588 >gi|300769900|ref|ZP_07079779.1| iron-sulfur cluster binding protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762376|gb|EFK59193.1| iron-sulfur cluster binding protein [Sphingobacterium spiritivorum ATCC 33861] Length = 465 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y + + +L L Sbjct: 311 YCIRCGACLNVCPIYQNIGGHTYDTTYSGPIGSLISPHLSGMKE--FKHLSYASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT+ CP G++ K + + + K+ Sbjct: 365 -CGKCTEVCPVGIDIQKQLLLNRRDSVQEKL 394 >gi|258405161|ref|YP_003197903.1| hypothetical protein Dret_1037 [Desulfohalobium retbaense DSM 5692] gi|257797388|gb|ACV68325.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfohalobium retbaense DSM 5692] Length = 432 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 6/91 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R D L C+ C C +CP + + L + E D L+ Sbjct: 13 RDIDDQLVSCMKCGMCQAACPLFAETGREADVARGKIALLENLANEMIEDPKGVKDRLD- 71 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +C +C +CP G+ K + Sbjct: 72 -----KCLLCGSCAAACPSGVKVLDIFIKAR 97 >gi|227538290|ref|ZP_03968339.1| electron transport proton [Sphingobacterium spiritivorum ATCC 33300] gi|227241805|gb|EEI91820.1| electron transport proton [Sphingobacterium spiritivorum ATCC 33300] Length = 465 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y + + +L L Sbjct: 311 YCIRCGACLNVCPIYQNIGGHTYDTTYSGPIGSLISPHLSGMKE--FKHLSYASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT+ CP G++ K + + + K+ Sbjct: 365 -CGKCTEVCPVGIDIQKQLLLNRRDSVQEKL 394 >gi|51594566|ref|YP_068757.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pseudotuberculosis IP 32953] gi|51587848|emb|CAH19451.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pseudotuberculosis IP 32953] Length = 431 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 30/109 (27%), Gaps = 10/109 (9%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 K + + + + C+ C C+T CP N Y GP Sbjct: 5 PKHDASPEQDGTMVGDSRLTRDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA------ 57 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 58 ---GPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 103 >gi|145589292|ref|YP_001155889.1| formate dehydrogenase, alpha subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047698|gb|ABP34325.1| NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 963 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 76/258 (29%), Gaps = 54/258 (20%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKI-----DPTLTLRRSCR-EGICGSCGM 90 P N + T LD + +G +K P L + R +G C +C + Sbjct: 4 PTNPKELQLQTVEFKLDGKTIVSYEGETILKAAKRHGIDIPHLCFKDGYRPDGNCRACVV 63 Query: 91 NIDGTNTLACVK--------------DMKDIKGAIAVY------PLPHMSVIKDLVVDMS 130 I+G TLA + + + P + D + Sbjct: 64 EINGERTLAPSCCRTATPGMEVQANSERAVKSQKLVLEMLLSDMPDQGFKWVGDSKAEEE 123 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHED--------RQKIDGLYECVMCACCSTSCPS 182 QH + W + EL D L C+ C C +C Sbjct: 124 QH--QHGELSTWAARMDVTVRPELKALRRDKVAHDISHPAMAVNLDACIQCNRCVRACRE 181 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-L 241 N ++ A R E + +L DP C C Q+CP G L Sbjct: 182 EQVND-------VIGYAMR-------GGHSEIVFDLNDPMGESTCVACGECVQACPTGAL 227 Query: 242 NPAKAIAKIKMMLLDRKI 259 P I ++DRK+ Sbjct: 228 MPKGLIG---SQIVDRKV 242 >gi|315647859|ref|ZP_07900960.1| iron-sulfur cluster binding protein [Paenibacillus vortex V453] gi|315276505|gb|EFU39848.1| iron-sulfur cluster binding protein [Paenibacillus vortex V453] Length = 506 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 41/157 (26%), Gaps = 7/157 (4%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL-LQSHEDR 161 + LP + + L V MS R ++ + Sbjct: 246 IPSWADLEVMATLLPRSATGQKLTVYMSGISGPKRELDADGPDEMHIIIIDNGRSLQLGD 305 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP Y G L + ++ E D Sbjct: 306 PEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALNKNVAEWDDIANAS 365 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C ++CP + + ++ ++ Sbjct: 366 ------SLCGACYEACPVKIPLHDMLVSLRRRKIEAG 396 >gi|304314216|ref|YP_003849363.1| CoB-CoM heterodisulfide reductase, subunit C [Methanothermobacter marburgensis str. Marburg] gi|313104326|sp|Q50754|HDRC_METTM RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit C gi|302587675|gb|ADL58050.1| CoB-CoM heterodisulfide reductase, subunit C [Methanothermobacter marburgensis str. Marburg] Length = 185 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS G + + + + D + L+ Sbjct: 32 LEYCFQCGTCTGSCPS---------GRRTPYRVRQIIR----KANVGLKDEIISDPTLWM 78 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T +C + CP+ + + + Sbjct: 79 CTTCYSCQERCPRKVKIVDVVKLARNEAAKAG 110 >gi|89894504|ref|YP_517991.1| hypothetical protein DSY1758 [Desulfitobacterium hafniense Y51] gi|219668934|ref|YP_002459369.1| hypothetical protein Dhaf_2910 [Desulfitobacterium hafniense DCB-2] gi|89333952|dbj|BAE83547.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539194|gb|ACL20933.1| protein of unknown function DUF162 [Desulfitobacterium hafniense DCB-2] Length = 400 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 15/109 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYW----WNSDRYLGPAILLQAYRWLIDSRDEF 210 + C+ C C CP + + YLG + + + Sbjct: 301 REKMAVDDDFKQASHCLRCGGCMYECPVFQITAGTFGETYLGGIGTIWNV-FTSGGLEAT 359 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ C C + CP ++ I +++ L ++ Sbjct: 360 APQ----------IHTCLRCGRCVERCPMQIDVPNMIGELRNRLASGEV 398 >gi|146279225|ref|YP_001169383.1| electron transport complex, RnfABCDGE type, D subunit [Rhodobacter sphaeroides ATCC 17025] gi|145557466|gb|ABP72078.1| electron transport complex, RnfABCDGE type, D subunit [Rhodobacter sphaeroides ATCC 17025] Length = 519 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 27/90 (30%), Gaps = 18/90 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C CS +CP G R D D R+ L C Sbjct: 379 MPCIRCGRCSQACPV---------GLTPFELNARIQAD--DLEGAGRI-------GLLDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C +CP + + I K L + Sbjct: 421 ITCGCCAFTCPANIPLVQTIHYAKGKLAEA 450 >gi|307699721|ref|ZP_07636777.1| putative iron-sulfur cluster-binding protein [Mobiluncus mulieris FB024-16] gi|307615083|gb|EFN94296.1| putative iron-sulfur cluster-binding protein [Mobiluncus mulieris FB024-16] Length = 532 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 357 RCIRCSACLNICPVYEKVGGHAYGSVYPGPIGAI----LNPQLRGVCST------VDRSL 406 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP + + ++ ++D K Sbjct: 407 PFASTLCGACVEVCPVRIPFTDILVDLRRKVVDVK 441 >gi|306818147|ref|ZP_07451878.1| iron-sulfur cluster-binding protein [Mobiluncus mulieris ATCC 35239] gi|304649111|gb|EFM46405.1| iron-sulfur cluster-binding protein [Mobiluncus mulieris ATCC 35239] Length = 532 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 357 RCIRCSACLNICPVYEKVGGHAYGSVYPGPIGAI----LNPQLRGVCST------VDRSL 406 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP + + ++ ++D K Sbjct: 407 PFASTLCGACVEVCPVRIPFTDILVDLRRKVVDVK 441 >gi|269976560|ref|ZP_06183545.1| iron-sulfur cluster binding protein [Mobiluncus mulieris 28-1] gi|269935361|gb|EEZ91910.1| iron-sulfur cluster binding protein [Mobiluncus mulieris 28-1] Length = 532 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 357 RCIRCSACLNICPVYEKVGGHAYGSVYPGPIGAI----LNPQLRGVCST------VDRSL 406 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP + + ++ ++D K Sbjct: 407 PFASTLCGACVEVCPVRIPFTDILVDLRRKVVDVK 441 >gi|227830075|ref|YP_002831854.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus L.S.2.15] gi|227456522|gb|ACP35209.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus islandicus L.S.2.15] Length = 280 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP D+ D+ + + K D + + L C+ Sbjct: 9 PLPDDPRFLDISYDVQGPLPEEERNLLSNLKPEDREVAIKFWEAVKSDFRYDEYLRGCLN 68 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + D D+ +++ C Sbjct: 69 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDEVDKIWEFV------NKKVWACVQCYT 117 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 118 CSMRCPFNNEIAGLIMVLREYAVK 141 >gi|256811004|ref|YP_003128373.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus fervens AG86] gi|256794204|gb|ACV24873.1| CoB/CoM heterodisulfide reductase, subunit C [Methanocaldococcus fervens AG86] Length = 193 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 13/96 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C+ SCPS + + L++ ++ + + Sbjct: 27 HVSSFKACYQRGTCTGSCPSGRITAFK---TRKLIRYAQFGM----------RKLAVESE 73 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T C + CP+ + I I+ + Sbjct: 74 DLWMCTTCYECYERCPREVKITDIIKVIRNIAAKEG 109 >gi|297197128|ref|ZP_06914525.1| iron-sulfur cluster-binding protein [Streptomyces sviceus ATCC 29083] gi|197713990|gb|EDY58024.1| iron-sulfur cluster-binding protein [Streptomyces sviceus ATCC 29083] Length = 499 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 19/100 (19%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + + + ++ Sbjct: 317 RQALSCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVLTPQLV-------------GVK 363 Query: 220 DPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L + C +CP +N + + ++ ++ K Sbjct: 364 NAASLPFASTLCGACYDACPVKINIPEVLVHLRAEAVEAK 403 >gi|159041579|ref|YP_001540831.1| hypothetical protein Cmaq_1010 [Caldivirga maquilingensis IC-167] gi|157920414|gb|ABW01841.1| protein of unknown function DUF162 [Caldivirga maquilingensis IC-167] Length = 382 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 17/97 (17%) Query: 165 DGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C CP Y W Y+GP ++ ++ ++ + Sbjct: 293 WEALLCIRCGRCHFHCPVYRALDGSWGESPYVGPMGVMWTA--VVYGIEKAGPHAM---- 346 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C ++CP +N + I IK Sbjct: 347 ------LCMHAGTCREACPMKINIPEVIQGIKARYTK 377 >gi|326444521|ref|ZP_08219255.1| iron-sulfur protein [Streptomyces clavuligerus ATCC 27064] Length = 475 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 45/175 (25%), Gaps = 14/175 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V + S + W T Sbjct: 235 NGRMCLTLPETLISVVGVEKTVPTWRDLGVFLQTLPRSSTAERMNPYTSLWTGTTGGDGP 294 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + L C+ C+ C CP Y G L Sbjct: 295 RAFHLVLLDNGRTATLADPVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAVL 354 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E +L L C + CP ++ + + +++ + ++ Sbjct: 355 SPQLRGITSEIDASLPYASSL-----CGACYEVCPVAIDIPEILVRLRERVAEQG 404 >gi|294816187|ref|ZP_06774830.1| Putative iron-sulfur protein [Streptomyces clavuligerus ATCC 27064] gi|294328786|gb|EFG10429.1| Putative iron-sulfur protein [Streptomyces clavuligerus ATCC 27064] Length = 468 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 45/175 (25%), Gaps = 14/175 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V + S + W T Sbjct: 228 NGRMCLTLPETLISVVGVEKTVPTWRDLGVFLQTLPRSSTAERMNPYTSLWTGTTGGDGP 287 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + L C+ C+ C CP Y G L Sbjct: 288 RAFHLVLLDNGRTATLADPVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAVL 347 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E +L L C + CP ++ + + +++ + ++ Sbjct: 348 SPQLRGITSEIDASLPYASSL-----CGACYEVCPVAIDIPEILVRLRERVAEQG 397 >gi|300781432|ref|ZP_07091286.1| iron-sulfur cluster-binding protein [Corynebacterium genitalium ATCC 33030] gi|300533139|gb|EFK54200.1| iron-sulfur cluster-binding protein [Corynebacterium genitalium ATCC 33030] Length = 534 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 53/189 (28%), Gaps = 27/189 (14%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVY-PLPHMS---VIKDLVVDMSHFYSQHRSIEP 141 GS + N CV + + + V LP V L+ S + Sbjct: 234 GSVSIVESEGNGRMCVTLPETLITVMGVEKLLPSFDDLGVFMQLLPRSSTGERMNPYTSI 293 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSD 188 W + +E D + L C+ C+ C CP Y Sbjct: 294 WSGVTAEDGPQEFHIVLMDNGRTAALSNEIGREALKCIRCSACLNVCPVYERAGGHSYGS 353 Query: 189 RYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 Y GP + + +DS D+ Y C + CP + + Sbjct: 354 VYPGPIGAILTPQLAGMDSTDDVTASLP---------YASSLCGRCDEVCPVKIPITDVL 404 Query: 248 AKIKMMLLD 256 +++ + Sbjct: 405 LEMRHQKVK 413 >gi|238793555|ref|ZP_04637179.1| hypothetical protein yinte0001_40930 [Yersinia intermedia ATCC 29909] gi|238727145|gb|EEQ18675.1| hypothetical protein yinte0001_40930 [Yersinia intermedia ATCC 29909] Length = 409 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 10/97 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + + C+ C C+T CP N Y GP D + Sbjct: 1 MPQDKHLARDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRL 50 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D L C C +CP + I + K Sbjct: 51 KDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 87 >gi|224371751|ref|YP_002605915.1| HdrD5 [Desulfobacterium autotrophicum HRM2] gi|223694468|gb|ACN17751.1| HdrD5 [Desulfobacterium autotrophicum HRM2] Length = 398 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C SCP + S + + E L L D LY Sbjct: 22 LKYCINCRFCLPSCPLFNITSGEISHGGSGITRSLYYAVQWGLEDKETLHELRDI--LYE 79 Query: 227 CHTIMNCTQSCPKGLN----PAKAIAKIKMMLLDRKI 259 C T +C +C K L+ AI K + ++++++I Sbjct: 80 CTTCGSCELAC-KNLSTGTKLVDAIMKGRELMIEKQI 115 >gi|71278300|ref|YP_271332.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] gi|71144040|gb|AAZ24513.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] Length = 492 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 23/89 (25%), Gaps = 9/89 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C CP Y G + + L Sbjct: 321 QCIRCGACMNHCPVYTRIGGHAYGTVYPGPIGKMISPHMLGLEATTNLPTAS-------- 372 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + K + +++ + Sbjct: 373 TLCGACGEVCPVKIPIPKILLRLRQESVK 401 >gi|222445089|ref|ZP_03607604.1| hypothetical protein METSMIALI_00708 [Methanobrevibacter smithii DSM 2375] gi|222434654|gb|EEE41819.1| hypothetical protein METSMIALI_00708 [Methanobrevibacter smithii DSM 2375] Length = 349 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C SCPS G + + + + E + L+ C Sbjct: 197 HCFQCGTCGGSCPS---------GRRTPYKVRQIVRKCLLGLKEE----VISDDALWMCT 243 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + + I K + + Sbjct: 244 TCYTCQERCPRSVKIVEIIKKARNVAAHAG 273 >gi|55981335|ref|YP_144632.1| putative iron-sulfur protein [Thermus thermophilus HB8] gi|55772748|dbj|BAD71189.1| putative iron-sulfur protein [Thermus thermophilus HB8] Length = 462 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 9/96 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP Y G ++D L LE+ + L Sbjct: 305 WETLRCLRCGACLNACPVYRQTGGHPYGYVYSGPIGA-VLDPG-------LLTLEEAYPL 356 Query: 225 -YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C ++CP + K + + ++ + Sbjct: 357 PYASTLCGACLEACPVKIPIPKLLLTWRHRAVEEGL 392 >gi|332295310|ref|YP_004437233.1| CoB/CoM heterodisulfide reductase, subunit C [Thermodesulfobium narugense DSM 14796] gi|332178413|gb|AEE14102.1| CoB/CoM heterodisulfide reductase, subunit C [Thermodesulfobium narugense DSM 14796] Length = 100 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 14/96 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C C CS CP + + +R+++ +E LE + Sbjct: 17 DFNASACFNCGTCSALCPV--------GFDILPRKLFRYVLLGEEE------KILESTDQ 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C C + CP +N + I I+ L K+ Sbjct: 63 IFSCLLCRMCEEQCPHDVNITENIRLIRNYLAKSKL 98 >gi|309782595|ref|ZP_07677318.1| iron-sulfur cluster binding protein [Ralstonia sp. 5_7_47FAA] gi|308918686|gb|EFP64360.1| iron-sulfur cluster binding protein [Ralstonia sp. 5_7_47FAA] Length = 469 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + +Y L ++ D Q Sbjct: 304 FQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAA--- 360 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP + + + ++ ++R++ Sbjct: 361 -----------TLCGECNRVCPASIPLSDLLRTLREKQMEREL 392 >gi|262382189|ref|ZP_06075327.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297366|gb|EEY85296.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 455 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + Y P + L + E + Sbjct: 302 NCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++C+ CP ++ + I + + L Sbjct: 351 ACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|227503832|ref|ZP_03933881.1| possible iron-sulfur cluster-binding protein [Corynebacterium striatum ATCC 6940] gi|227199656|gb|EEI79704.1| possible iron-sulfur cluster-binding protein [Corynebacterium striatum ATCC 6940] Length = 501 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 42/172 (24%), Gaps = 12/172 (6%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWAGVTENDGP 301 Query: 152 KELLQSHEDR--------QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D +C+ C+ C CP Y G L Sbjct: 302 KNFHLILLDNGRTAALSSPIGHQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGISL 361 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + P Y C C + CP + ++ I + + + Sbjct: 362 TPQLTGMKDHHDPSASLP---YACSLCGRCDEVCPVKIPLSEVILENRHQKV 410 >gi|242280037|ref|YP_002992166.1| hypothetical protein Desal_2571 [Desulfovibrio salexigens DSM 2638] gi|242122931|gb|ACS80627.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio salexigens DSM 2638] Length = 431 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 6/88 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + + + L Sbjct: 15 DDQMVACMKCGMCQAVCPVFAETMQEADVTRGKIALLEKLAHEMVKDADQVNEKLN---- 70 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 RC +C +CP G+ K + Sbjct: 71 --RCLLCGSCAANCPSGVKIMDIFIKAR 96 >gi|150007238|ref|YP_001301981.1| putative electron transport protein [Parabacteroides distasonis ATCC 8503] gi|149935662|gb|ABR42359.1| putative electron transport protein [Parabacteroides distasonis ATCC 8503] Length = 455 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + Y P + L + E + Sbjct: 302 NCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++C+ CP ++ + I + + L Sbjct: 351 ACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|147919957|ref|YP_686289.1| Fe-S cluster-binding oxidoreductase component (HdrD-like) [uncultured methanogenic archaeon RC-I] gi|110621685|emb|CAJ36963.1| Fe-S cluster-binding oxidoreductase component (HdrD-like) [uncultured methanogenic archaeon RC-I] Length = 352 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 7/97 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ID + +C C C CP + R + + E + Sbjct: 4 DHIDDILKCTRCGRCRALCPVNEELGWESTNARGRMLLARAMAEG--VQPSEAMK----- 56 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C T C+ +CP G P + + + ++ Sbjct: 57 NSFYTCLTCAMCSSTCPSGATPDEVVEAARAEMVRAG 93 >gi|15897987|ref|NP_342592.1| heterodisulfide reductase, subunit C (hdrC-1) [Sulfolobus solfataricus P2] gi|284173964|ref|ZP_06387933.1| heterodisulfide reductase, subunit C (hdrC-1) [Sulfolobus solfataricus 98/2] gi|13814316|gb|AAK41382.1| Heterodisulfide reductase, subunit C (hdrC-1) [Sulfolobus solfataricus P2] gi|261602702|gb|ACX92305.1| heterodisulfide reductase, subunit C (HdrC-1) [Sulfolobus solfataricus 98/2] Length = 280 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP D+ D+ + + K D + + L C+ Sbjct: 9 PLPDDPRFLDMSYDVQAPLPEEERNLLSNLKPEEREVAVKFWEAVKSDFRYNEYLRGCLN 68 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + D D+ +++ C Sbjct: 69 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDEVDKIWEFV------NKKVWACVQCYT 117 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 118 CSMRCPFNNEIAGLIMVLREYAVK 141 >gi|302389269|ref|YP_003825090.1| electron transport complex, RnfABCDGE type, C subunit [Thermosediminibacter oceani DSM 16646] gi|302199897|gb|ADL07467.1| electron transport complex, RnfABCDGE type, C subunit [Thermosediminibacter oceani DSM 16646] Length = 438 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C +CP + YLG + + ER L+ C Sbjct: 364 MPCIRCARCVDACPIHLLP--TYLGKLAERGMW---------VEAERYHALD-------C 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP + + I K ++ + Sbjct: 406 IECGCCAYVCPANIPLTQLIRLAKNRIMASR 436 >gi|189219609|ref|YP_001940250.1| glycolate dehydrogenase, iron-sulfur subunit GlcF [Methylacidiphilum infernorum V4] gi|189186467|gb|ACD83652.1| Glycolate dehydrogenase, iron-sulfur subunit GlcF [Methylacidiphilum infernorum V4] Length = 422 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C SCP+Y P + + + ++ E E LY C + C Sbjct: 1 MCLPSCPTYQETKIERNSPRGRISLMKAIAENAMELTPEF------AHELYFCLGCLACQ 54 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRKI 259 +CP G++ + + K+ Sbjct: 55 SACPVGVDYKTLFEASRQDIEKSKV 79 >gi|222054839|ref|YP_002537201.1| SNARE associated Golgi protein [Geobacter sp. FRC-32] gi|221564128|gb|ACM20100.1| SNARE associated Golgi protein [Geobacter sp. FRC-32] Length = 807 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C C YL + D D + + Sbjct: 20 MNGCTGCGVCVREC--------AYLKLYGTPRDIAGSYDPVDSK---------NSSICFE 62 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP+G++P K +++ +DR Sbjct: 63 CSLCGLCTAVCPEGVDPQKLFLEMRREAVDRG 94 >gi|293374729|ref|ZP_06621037.1| electron transport complex, RnfABCDGE type, C subunit [Turicibacter sanguinis PC909] gi|292646643|gb|EFF64645.1| electron transport complex, RnfABCDGE type, C subunit [Turicibacter sanguinis PC909] Length = 462 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 18/101 (17%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ CV C C+ CP+ L P + D E Sbjct: 379 WPNYKKEVIMEKDEQPCVSCGRCTDHCPT-------GLQPV-------LIKDMAKLKDKE 424 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL L C CT CP + + + + K +L Sbjct: 425 RLTKLNAK----SCVECGMCTYVCPSHIEVTEFVRRAKRIL 461 >gi|148642856|ref|YP_001273369.1| heterodisulfide reductase, subunit C, HdrC [Methanobrevibacter smithii ATCC 35061] gi|148551873|gb|ABQ87001.1| heterodisulfide reductase, subunit C, HdrC [Methanobrevibacter smithii ATCC 35061] Length = 349 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C SCPS G + + + + E + L+ C Sbjct: 197 HCFQCGTCGGSCPS---------GRRTPYKVRQIVRKCLLGLKEE----VISDDALWMCT 243 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + + I K + + Sbjct: 244 TCYTCQERCPRSVKIVEIIKKARNVAAHAG 273 >gi|53803292|ref|YP_114983.1| formate dehydrogenase subunit alpha [Methylococcus capsulatus str. Bath] gi|53757053|gb|AAU91344.1| formate dehydrogenase, alpha subunit [Methylococcus capsulatus str. Bath] Length = 925 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 60/209 (28%), Gaps = 29/209 (13%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCR-EGICGSCGMNIDGTNTLACVK 102 + +D G + +L + P L R R +G C +C + I+G LA Sbjct: 8 VFKLDGRPVGARPGEAILQAARRHGVEIPHLCYRDGLRPDGNCRACVVEIEGERVLAASC 67 Query: 103 ------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT-----VSPKPA 151 M+ + M V L S+ + W + Sbjct: 68 CRTPGEGMEVRSDSPRARSAQRMVVELLLADQPETSRSRDDELRQWAERLGVSGSRFPGR 127 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + L C+ C C +C N +G A R + D Sbjct: 128 EAPPPDRSNPAIAVQLDACIQCTRCVRACRETQVND--VIGYAYRGSHARIVFD------ 179 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 DP L C + C Q CP G Sbjct: 180 ------QGDPMGLSSCVSCGECVQVCPTG 202 >gi|325837597|ref|ZP_08166444.1| electron transport complex protein, RnfABCDGE type, C subunit [Turicibacter sp. HGF1] gi|325490899|gb|EGC93198.1| electron transport complex protein, RnfABCDGE type, C subunit [Turicibacter sp. HGF1] Length = 462 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 18/101 (17%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ CV C C+ CP+ L P + D E Sbjct: 379 WPNYKKEVIMEKDEQPCVSCGRCTDHCPT-------GLQPV-------LIKDMAKLKDKE 424 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL L C CT CP + + + + K +L Sbjct: 425 RLTKLNAK----SCVECGMCTYVCPSHIEVTEFVRRAKRIL 461 >gi|319653515|ref|ZP_08007614.1| hypothetical protein HMPREF1013_04231 [Bacillus sp. 2_A_57_CT2] gi|317394714|gb|EFV75453.1| hypothetical protein HMPREF1013_04231 [Bacillus sp. 2_A_57_CT2] Length = 421 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ++CV C C +CP+Y P + + + + +D + + Sbjct: 7 YKETFDCVQCGYCLPACPTYASMGKESHSPRGRINLVQMAAEGKIT-----IDEMTESME 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + K + K Sbjct: 62 L--CLGCRACETACPTNVQYGKILESFKE 88 >gi|229160123|ref|ZP_04288124.1| Uncharacterized electron transport protein ykgF [Bacillus cereus R309803] gi|228623334|gb|EEK80159.1| Uncharacterized electron transport protein ykgF [Bacillus cereus R309803] Length = 476 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + ++ K Sbjct: 357 PYASSLCGACTEACPVKIPLHDLLIKHRSRIVQEK 391 >gi|90414490|ref|ZP_01222465.1| putative electron transport protein ykgF [Photobacterium profundum 3TCK] gi|90324398|gb|EAS40960.1| putative electron transport protein ykgF [Photobacterium profundum 3TCK] Length = 469 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV CA C +CP+Y Y GP + L+ D+F+ Sbjct: 312 RCVRCAACVNTCPAYRHIGGQSYGSIYSGPIGAV--LSPLLGGYDDFKDL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + + + K + + + KI Sbjct: 360 PYACSLCRACHDVCPVKIPLSDLLLKHRQKMGEEKI 395 >gi|116747841|ref|YP_844528.1| hypothetical protein Sfum_0393 [Syntrophobacter fumaroxidans MPOB] gi|116696905|gb|ABK16093.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 437 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ D L C+ C C + CP + L L+ D Sbjct: 12 REVEDQLVVCMRCGMCQSVCPLFAETGRESDVARGKLALLDGLMQ------EMFKDPAGV 65 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL RC +C +CP G+ K + +L Sbjct: 66 SDRLNRCLLCGSCAANCPSGVRVLDIFIKARAIL 99 >gi|289549114|ref|YP_003474102.1| heterodisulfide reductase subunit C [Thermocrinis albus DSM 14484] gi|289182731|gb|ADC89975.1| heterodisulfide reductase subunit C [Thermocrinis albus DSM 14484] Length = 252 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C C+ C+ SCP + + +RY P + R + + + + + Sbjct: 52 MNAPDGKTIVNCYQCSYCTASCPVHNYWDERY-NPRHFIYLARLGMVDELQKRADVM--- 107 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +RC + CT CPKG+ + + I ++ + + Sbjct: 108 ------WRCVSCHKCTHRCPKGVLVEEVLKVILRVMAKKGL 142 >gi|218885500|ref|YP_002434821.1| iron-sulfur cluster binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756454|gb|ACL07353.1| iron-sulfur cluster binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 475 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 7/90 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G + L D + L L Sbjct: 311 QCIRCGTCLNHCPVYIRIGGHAYGSVYPGPIGKILTPQIDGLADK--GVLATASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP + I +++ D K Sbjct: 365 -CNACEEVCPVRIPIPGIIRRMRTEAYDEK 393 >gi|332159837|ref|YP_004296414.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664067|gb|ADZ40711.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862589|emb|CBX72742.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica W22703] Length = 421 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 30/105 (28%), Gaps = 15/105 (14%) Query: 152 KELLQSHEDRQKID-----GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L +ED Q C+ C C+T CP N Y GP Sbjct: 1 MTWLPQNEDTQDTHLARDKSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------G 50 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 51 PDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 95 >gi|310780336|ref|YP_003968668.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Ilyobacter polytropus DSM 2926] gi|309749659|gb|ADO84320.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Ilyobacter polytropus DSM 2926] Length = 345 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 38/138 (27%), Gaps = 21/138 (15%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLG 192 + + S + ++ + C+ C CS CP+ + Y G Sbjct: 204 EKMEELPFSKIDPSKIEGTQQEIFDKEEMWNEFSERCLACGTCSYVCPTCHCYDVKDYDG 263 Query: 193 PAILLQAYRW----------LIDSRDEF------QGERLDNL----EDPFRLYRCHTIMN 232 + W + + + L ++ +Y C Sbjct: 264 GKSGERFRCWDSCMSSDFTLMAHGNPRTSQMQRVRQRFMHKLVYYPKNHEGVYSCVGCGR 323 Query: 233 CTQSCPKGLNPAKAIAKI 250 C CP L+ K I K+ Sbjct: 324 CVDKCPVHLDIVKVIKKL 341 >gi|224369930|ref|YP_002604094.1| Fe-S oxidoreductase family protein (selenocysteine protein) [Desulfobacterium autotrophicum HRM2] gi|223692647|gb|ACN15930.1| Fe-S oxidoreductase family protein (selenocysteine protein) [Desulfobacterium autotrophicum HRM2] Length = 439 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 13/88 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C++ CP+ ++ P L+ +D D+ + R + Sbjct: 29 NLNTCLTCGACASGCPATGFDGMD---PRKFLRMAALGMD--DQIKESRWP--------W 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP +N + + + + Sbjct: 76 YCTMCTRCVYVCPMKINIPQLVFNARRL 103 >gi|207108213|ref|ZP_03242375.1| putative iron-sulfur protein [Helicobacter pylori HPKX_438_CA4C1] Length = 421 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 248 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 300 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 301 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 335 >gi|78044496|ref|YP_360133.1| glycolate oxidase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996611|gb|ABB15510.1| glycolate oxidase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 412 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 8/89 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C SCP+Y + + + +++ + ++Q + + +E C Sbjct: 10 RCNKCGLCQQSCPTYKVTKNEFYLARGRNRLMDLVLEKKYDWQKQIIYAIET------CL 63 Query: 229 TIMNCTQSCPKGLNPAKAIAKI-KMMLLD 256 C ++CP + + + K ++ Sbjct: 64 QCGACVETCPSSVK-TDLVMNLAKREIVK 91 >gi|319893416|ref|YP_004150291.1| Iron-sulfur cluster-binding protein [Staphylococcus pseudintermedius HKU10-03] gi|317163112|gb|ADV06655.1| Iron-sulfur cluster-binding protein [Staphylococcus pseudintermedius HKU10-03] gi|323463536|gb|ADX75689.1| glycolate oxidase iron-sulfur subunit, putative [Staphylococcus pseudintermedius ED99] Length = 426 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + ++R + ++CV C C CP+Y P + + + Sbjct: 1 MTTNLKERLDYEATFDCVQCGYCLPVCPTYVSFKSEKHSPRGRINLVKM-------AAED 53 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++ + + C C CP + ++ Sbjct: 54 KITLADMASGIDLCLGCRACETICPTHVRYGDILS 88 >gi|255014137|ref|ZP_05286263.1| putative electron transport protein [Bacteroides sp. 2_1_7] Length = 455 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + Y P + L + E + Sbjct: 302 NCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++C+ CP ++ + I + + L Sbjct: 351 ACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|256390663|ref|YP_003112227.1| iron-sulfur cluster binding protein [Catenulispora acidiphila DSM 44928] gi|256356889|gb|ACU70386.1| iron-sulfur cluster binding protein [Catenulispora acidiphila DSM 44928] Length = 485 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 50/194 (25%), Gaps = 23/194 (11%) Query: 78 RSCREGICGSCGMNIDGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 G G +G L + + + + V L+ S + Sbjct: 222 ACADTGTVGVVESEGNGRMCLTLPETLITVMGIEKVLPSFSDLEVFLQLLPRSSTAERMN 281 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYW---- 184 W +E D + L C+ C+ C CP Y Sbjct: 282 PYTSLWTGVTPGDGPQEFHLVLLDNGRTKTLADTAGRSALHCIRCSACLNVCPVYERTGG 341 Query: 185 -WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 Y GP + E D+L + C +CP ++ Sbjct: 342 RSYGSVYPGPIGAV----LTPQLVGVGTSEHADSLP-----FASTLCGACYDACPVRIDI 392 Query: 244 AKAIAKIKMMLLDR 257 + + ++ ++D Sbjct: 393 PEMLVHLRAKVVDA 406 >gi|114563026|ref|YP_750539.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334319|gb|ABI71701.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 462 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 18/108 (16%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQ 211 + + +C+ C C +CP Y + Y P + A D Sbjct: 296 RTEMMKDKILAESLKCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGAKHD------ 349 Query: 212 GERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + + C +CT CP + K IA + + + K Sbjct: 350 --------DTNSIPWACTLCGSCTYVCPTMVPLDKIIAHHRRLKAEAK 389 >gi|318607618|emb|CBY29116.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica subsp. palearctica Y11] Length = 421 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 30/105 (28%), Gaps = 15/105 (14%) Query: 152 KELLQSHEDRQKID-----GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L +ED Q C+ C C+T CP N Y GP Sbjct: 1 MTWLPQNEDTQDTHLARDKSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------G 50 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 51 PDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 95 >gi|242277710|ref|YP_002989839.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio salexigens DSM 2638] gi|242120604|gb|ACS78300.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio salexigens DSM 2638] Length = 406 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 13/93 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP +D ++ A L D L + ++ Sbjct: 25 LKKCYQCATCSVACPL--SPADNPYPRKEMVWAQWGLKD-----------KLVNDIDIWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CH C+ CP+G PA +A ++ M + + Sbjct: 72 CHNCGTCSDLCPRGARPADLLAGLRNMAYQKMV 104 >gi|88798170|ref|ZP_01113756.1| oxidoreductase, FAD-binding protein [Reinekea sp. MED297] gi|88778946|gb|EAR10135.1| oxidoreductase, FAD-binding protein [Reinekea sp. MED297] Length = 941 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 15/135 (11%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y I+ + +L E + C+ C C C Sbjct: 490 ESIYELMTRIKRLIDPNGLLNPGVILNDDEKAHLKHLKPMPVADPVIDRCIECGFCEDVC 549 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDE--FQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS ++ L P + A+R + +D+ G D + C C CP Sbjct: 550 PSQNYS----LTPRQRIAAFREIQRRKDQQVNVGPDWDQAFQTMGIDTCAATGLCELKCP 605 Query: 239 KGLNPAKAIAKIKMM 253 G+N + + K++ Sbjct: 606 VGINTGELVLKLRSR 620 >gi|228999899|ref|ZP_04159471.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock3-17] gi|229007452|ref|ZP_04165049.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock1-4] gi|228753840|gb|EEM03281.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock1-4] gi|228759841|gb|EEM08815.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock3-17] Length = 477 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAACINVCPIYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + +++ Sbjct: 357 PYASSLCGACTEACPVKIPLHDLLIKHRRHIVEEA 391 >gi|153997118|ref|ZP_02022251.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis CA88-4125] gi|170026200|ref|YP_001722705.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pseudotuberculosis YPIII] gi|270488835|ref|ZP_06205909.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Yersinia pestis KIM D27] gi|115349438|emb|CAL22411.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis CO92] gi|149289424|gb|EDM39502.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis CA88-4125] gi|169752734|gb|ACA70252.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Yersinia pseudotuberculosis YPIII] gi|262363553|gb|ACY60274.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis D106004] gi|270337339|gb|EFA48116.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Yersinia pestis KIM D27] Length = 415 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C+T CP N Y GP D + D Sbjct: 10 DNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDDA 59 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 60 LKYCTNCKRCEVACPSDVKIGDIIQRAK 87 >gi|117923795|ref|YP_864412.1| hypothetical protein Mmc1_0481 [Magnetococcus sp. MC-1] gi|117607551|gb|ABK43006.1| protein of unknown function DUF224, cysteine-rich region domain protein [Magnetococcus sp. MC-1] Length = 421 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 7/81 (8%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C C C CP+Y D P + L+ + L Sbjct: 11 NAEKCTHCGYCLPVCPTYRVERDEMQSPRGRVSIVLALMRG-------AMQPAAAVDALS 63 Query: 226 RCHTIMNCTQSCPKGLNPAKA 246 C C +CP G+ P K Sbjct: 64 HCIGCRACHGACPVGVRPGKL 84 >gi|327441850|dbj|BAK18215.1| uncharacterized conserved protein containing a ferredoxin-like domain [Solibacillus silvestris StLB046] Length = 475 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C +CP Y Y GP + L+ D+++ Sbjct: 311 QCIRCAACINTCPVYRHVGGHTYGSIYSGPIGAV--LSPLLGGYDDYKEL---------- 358 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT CP + + + K + ++++R Sbjct: 359 PYASTLCGACTDVCPVKIPLHQLLHKHREVIVER 392 >gi|268316263|ref|YP_003289982.1| hypothetical protein Rmar_0696 [Rhodothermus marinus DSM 4252] gi|262333797|gb|ACY47594.1| protein of unknown function DUF162 [Rhodothermus marinus DSM 4252] Length = 466 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 8/93 (8%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + +C+ C C +CP Y + G + L+ D + L Sbjct: 301 PRFWPALKCIRCGACMNTCPVYRRSGGYSYGATVPGPIGAILMPGYDTARYRTLP----- 355 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y +C + CP ++ + + + + Sbjct: 356 ---YASSLCGSCREVCPVQIDIDEQLYAWRQEV 385 >gi|186893568|ref|YP_001870680.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pseudotuberculosis PB1/+] gi|186696594|gb|ACC87223.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Yersinia pseudotuberculosis PB1/+] Length = 415 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C+T CP N Y GP D + D Sbjct: 10 DNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDDA 59 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 60 LKYCTNCKRCEVACPSDVKIGDIIQRAK 87 >gi|297379362|gb|ADI34249.1| iron-sulfur cluster binding protein [Helicobacter pylori v225d] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|153809325|ref|ZP_01961993.1| hypothetical protein BACCAC_03638 [Bacteroides caccae ATCC 43185] gi|149128095|gb|EDM19316.1| hypothetical protein BACCAC_03638 [Bacteroides caccae ATCC 43185] Length = 461 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V + Y + R + + +L + C+ C C +CP Y Sbjct: 263 VTTYTSHYRRPREGGEYHIIIVDNGRSTILSKPD----HIKTLNCIRCGACMNTCPVYRR 318 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + D + DNL C ++C+ CP ++ Sbjct: 319 SGGYSYTYFIPGPIGINLGMAHDP-----EKYYDNLS------ACSLCISCSDVCPVKVD 367 Query: 243 PAKAIAKIKMML 254 A+ I K + L Sbjct: 368 LAEQIYKWRQDL 379 >gi|308182312|ref|YP_003926439.1| iron-sulfur cluster binding protein [Helicobacter pylori PeCan4] gi|308064497|gb|ADO06389.1| iron-sulfur cluster binding protein [Helicobacter pylori PeCan4] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|303244384|ref|ZP_07330720.1| CoB/CoM heterodisulfide reductase, subunit C [Methanothermococcus okinawensis IH1] gi|302485279|gb|EFL48207.1| CoB/CoM heterodisulfide reductase, subunit C [Methanothermococcus okinawensis IH1] Length = 196 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 15/113 (13%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + + K + ED + C C C+ SCPS + ++ A Sbjct: 6 KDFNPKFPEKVIEAGKAIGED-EATKSFRRCYQCGTCTGSCPSGRIT--AFRTRKLIRSA 62 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L D L++C T C + CP+ + I ++ Sbjct: 63 MLGLGD------------YIKSEDLWKCTTCYTCYERCPRNVKITDIIKAMRN 103 >gi|229160347|ref|ZP_04288345.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus R309803] gi|228623071|gb|EEK79899.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus R309803] Length = 417 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEETRDIINQNK 83 >gi|256829508|ref|YP_003158236.1| hypothetical protein Dbac_1729 [Desulfomicrobium baculatum DSM 4028] gi|256578684|gb|ACU89820.1| protein of unknown function DUF162 [Desulfomicrobium baculatum DSM 4028] Length = 712 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C+ CP Y +G + + +D+ + + Sbjct: 312 RCVRCGACANVCPVYRMVGGHQMGHIYIGAIGLILTYFFHGKDKAK----------NLVQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ I +I +LD Sbjct: 362 NCINCQACKHICAAGIDLPLLIKEIHARILDE 393 >gi|255327206|ref|ZP_05368281.1| FAD linked oxidase domain protein [Rothia mucilaginosa ATCC 25296] gi|255295824|gb|EET75166.1| FAD linked oxidase domain protein [Rothia mucilaginosa ATCC 25296] Length = 968 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDPFRL 224 CV C C CPS L P + R + + D ERL + + + Sbjct: 551 DRCVECGYCEPVCPSRNLT----LTPRKRIVLRREIAAAEANGDHELAERLRKEYEYYGI 606 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP +N I +++ Sbjct: 607 ETCAVDGMCQTRCPVNINTGDLIRRLRSE 635 >gi|167764299|ref|ZP_02436426.1| hypothetical protein BACSTE_02684 [Bacteroides stercoris ATCC 43183] gi|167698415|gb|EDS14994.1| hypothetical protein BACSTE_02684 [Bacteroides stercoris ATCC 43183] Length = 417 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 10/104 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++ + +C+ C C+ CP N Y GP L R E+ E Sbjct: 1 MNMQQNNISENNFEQCIKCTVCTVYCPVIPVNP-EYPGPKQAGPDEERLRLKRGEYFDEA 59 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I ++ +K Sbjct: 60 LK---------YCLNCKRCEVACPSNVKIGDIIQLARIKYSKKK 94 >gi|34498482|ref|NP_902697.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34104337|gb|AAQ60696.1| probable ferredoxin [Chromobacterium violaceum ATCC 12472] Length = 938 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 8/87 (9%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-SRDEFQGERLDNLEDPFR--- 223 C C C +CPS+ L P + A+R + RD L L+ +R Sbjct: 544 DRCTECGFCEPACPSHGLT----LSPRQRVVAWRRIRQLERDGEGAMELAALKAGYRYRA 599 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C CP G+N + K+ Sbjct: 600 IDTCAATGMCATRCPVGINTGALMKKL 626 >gi|330835398|ref|YP_004410126.1| hypothetical protein Mcup_1539 [Metallosphaera cuprina Ar-4] gi|329567537|gb|AEB95642.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4] Length = 333 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 16/86 (18%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C SCP+Y P + + + I + C Sbjct: 5 DSCVHCGFCLESCPTYVVTRSEIHSPRGRIASVKLGI---------------SSVGIETC 49 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP G+ + I ++ Sbjct: 50 MFCRRCEAACPSGVEYGRLI-HLRRE 74 >gi|292653829|ref|YP_003533727.1| glycerol-3-phosphate dehydrogenase subunit C [Haloferax volcanii DS2] gi|291369843|gb|ADE02071.1| glycerol-3-phosphate dehydrogenase subunit C [Haloferax volcanii DS2] Length = 478 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 10/100 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D G +C C C TSCP + + GP ++++ +R D+ + Sbjct: 73 DLDLRAGADDCYKCTACDTSCPVAEV-DEEFPGPK---------FQGPEQWRLKRKDDAD 122 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C +CP + ++ + + + ++ Sbjct: 123 IDDSVMSCSNCMRCDSACPSSVPLSQMHNEARGEYVSEQM 162 >gi|229087630|ref|ZP_04219759.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-44] gi|228695671|gb|EEL48527.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-44] Length = 477 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ DE++ Y Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAVLTPLLGGYDEYKDL----------PY 358 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT++CP + + K + +++ Sbjct: 359 ASSLCGACTEACPVKIPLHDLLIKHRRNIVEEA 391 >gi|167741368|ref|ZP_02414142.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 14] gi|167826927|ref|ZP_02458398.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 9] gi|226194544|ref|ZP_03790141.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pakistan 9] gi|254263409|ref|ZP_04954274.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710a] gi|225933372|gb|EEH29362.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei Pakistan 9] gi|254214411|gb|EET03796.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710a] Length = 477 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C Q CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|76819800|ref|YP_337031.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] gi|76584273|gb|ABA53747.1| iron-sulfur cluster binding protein [Burkholderia pseudomallei 1710b] Length = 482 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 309 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTD--LPN 366 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C Q CP + + K++ M D ++ Sbjct: 367 A--------CTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARL 400 >gi|329956086|ref|ZP_08296857.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Bacteroides clarus YIT 12056] gi|328524845|gb|EGF51899.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Bacteroides clarus YIT 12056] Length = 417 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 10/104 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++ + +C+ C C+ CP N +Y GP L R E+ E Sbjct: 1 MNMQQNNISENNFEQCIKCTVCTVYCPVIPVNP-KYPGPKQAGPDEERLRLKRGEYFDEA 59 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I ++ +K Sbjct: 60 LK---------YCLNCKRCEVACPSNVKIGDIIQLARIKYSKKK 94 >gi|110598341|ref|ZP_01386615.1| Protein of unknown function DUF224, cysteine-rich region [Chlorobium ferrooxidans DSM 13031] gi|110340039|gb|EAT58540.1| Protein of unknown function DUF224, cysteine-rich region [Chlorobium ferrooxidans DSM 13031] Length = 497 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP+ + + R + Q +++ L+ C Sbjct: 22 CYQCGKCTAGCPAGGVMDNP------PARIMRLV-------QAGYVEDALRSDALWYCLG 68 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 M CT CP+ L+ A + ++ M L++ I Sbjct: 69 CMTCTSRCPQNLDIAATMDSLRAMALEKNI 98 >gi|298675430|ref|YP_003727180.1| hypothetical protein Metev_1534 [Methanohalobium evestigatum Z-7303] gi|298288418|gb|ADI74384.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methanohalobium evestigatum Z-7303] Length = 361 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 8/97 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + C+ C C CP + Y P +Q + GE L+ E Sbjct: 2 RDYKQAVDSCIDCKKCWDVCPVTKVKGEEY-TPQGKIQLLSKV------ESGETLEKAEF 54 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +Y C CP + I + +L ++ Sbjct: 55 DN-IYLSTRCGACDDVCPVNIPIKDIIQYERYLLAEQ 90 >gi|238789401|ref|ZP_04633187.1| hypothetical protein yfred0001_23330 [Yersinia frederiksenii ATCC 33641] gi|238722544|gb|EEQ14198.1| hypothetical protein yfred0001_23330 [Yersinia frederiksenii ATCC 33641] Length = 406 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C+T CP N Y GP D + D Sbjct: 1 MARDNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALY 50 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 51 DDALKYCTNCKRCEVACPSDVKIGDIIQRAK 81 >gi|187250472|ref|YP_001874954.1| Fe-S oxidoreductase-like protein [Elusimicrobium minutum Pei191] gi|186970632|gb|ACC97617.1| Fe-S oxidoreductase-like protein [Elusimicrobium minutum Pei191] Length = 406 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++ D + +C CA CS CP + GP R++++ + + + Sbjct: 34 EKNIYDSVSQCNKCAYCSRVCPFQLTQNREDRGPRARNLLARYIMEGKISLKQNTKEL-- 91 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CT+ C + + +++ L R++ Sbjct: 92 -KEVCLTCMLCGSCTRECFAKVPTHDHVLELERALGRREL 130 >gi|134100044|ref|YP_001105705.1| iron-sulfur cluster binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291002965|ref|ZP_06560938.1| iron-sulfur cluster binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133912667|emb|CAM02780.1| iron-sulfur cluster binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 482 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 44/179 (24%), Gaps = 24/179 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 231 NGRMCLTLPETLISVVGIEKLVPSWRDLEVFLQLLPRSSTGERMNPYTSTWTGVTPGDGP 290 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + + L C+ C+ C CP Y Y GP + Sbjct: 291 QSFHVVLLDNGRTNALADEVGRQALRCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAV- 349 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R D Y C CP ++ + ++ +++ Sbjct: 350 ---LTPQLRGTASP------VDQALPYASSLCGACYDVCPVAIDIPDLLVHLRTRVVEE 399 >gi|45437843|gb|AAS63392.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis biovar Microtus str. 91001] Length = 416 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C+T CP N Y GP D + D Sbjct: 11 DNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDDA 60 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 61 LKYCTNCKRCEVACPSDVKIGDIIQRAK 88 >gi|20094011|ref|NP_613858.1| heterodisulfide reductase, subunit C [Methanopyrus kandleri AV19] gi|41017217|sp|Q8TXT7|HDRC_METKA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit C gi|19886982|gb|AAM01788.1| Heterodisulfide reductase, subunit C [Methanopyrus kandleri AV19] Length = 192 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 13/89 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ SCPS S ++++ + + +D + L+ C T Sbjct: 41 CYQCGTCTGSCPSGRRTS---YRTRLIMRKLQLGL----------VDEVIKSDELWMCTT 87 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+G+ A+ + + + Sbjct: 88 CYTCYERCPRGVKIVDAVKAARNLAAKKG 116 >gi|213860008|ref|ZP_03385712.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 168 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|217034186|ref|ZP_03439605.1| hypothetical protein HP9810_886g23 [Helicobacter pylori 98-10] gi|216943354|gb|EEC22813.1| hypothetical protein HP9810_886g23 [Helicobacter pylori 98-10] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|153949411|ref|YP_001399226.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia pseudotuberculosis IP 31758] gi|152960906|gb|ABS48367.1| anaerobic glycerol-3-phosphate dehydrogenase, C subunit [Yersinia pseudotuberculosis IP 31758] Length = 415 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C+T CP N Y GP D + D Sbjct: 10 DNSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALYDDA 59 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 60 LKYCTNCKRCEVACPSDVKIGDIIQRAK 87 >gi|119945156|ref|YP_942836.1| iron-sulfur cluster binding protein [Psychromonas ingrahamii 37] gi|119863760|gb|ABM03237.1| iron-sulfur cluster binding protein [Psychromonas ingrahamii 37] Length = 486 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + + D + L Sbjct: 321 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGQIISPHMM--GLDNTKD-----LVTASS 373 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + CP + + + +++ Sbjct: 374 L-----CGACGEVCPVNIPIPEMLQRLRQEA 399 >gi|317010416|gb|ADU84163.1| iron-sulfur cluster binding protein [Helicobacter pylori SouthAfrica7] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|261350344|ref|ZP_05975761.1| heterodisulfide reductase, subunit C [Methanobrevibacter smithii DSM 2374] gi|288861127|gb|EFC93425.1| heterodisulfide reductase, subunit C [Methanobrevibacter smithii DSM 2374] Length = 341 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C SCPS G + + + + E + L+ C Sbjct: 189 HCFQCGTCGGSCPS---------GRRTPYKVRQIVRKCLLGLKEE----VISDDALWMCT 235 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + + I K + + Sbjct: 236 TCYTCQERCPRSVKIVEIIKKARNVAAHAG 265 >gi|218438674|ref|YP_002377003.1| heterodisulfide reductase, C subunit [Cyanothece sp. PCC 7424] gi|218171402|gb|ACK70135.1| putative heterodisulfide reductase, C subunit [Cyanothece sp. PCC 7424] Length = 193 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 13/92 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C CS CP+ +++Q W + + L+ C Sbjct: 40 AACMQCGTCSGGCPNVDKMDLSPRNLVLMVQRGEW-------------EKVLKSNTLWLC 86 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + CT CP+G+ P++ I +K + + I Sbjct: 87 TSCHTCTSRCPRGVRPSEIIEAVKALAIQEGI 118 >gi|108562561|ref|YP_626877.1| putative iron-sulfur protein [Helicobacter pylori HPAG1] gi|107836334|gb|ABF84203.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori HPAG1] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|317474418|ref|ZP_07933692.1| glycerol-3-phosphate dehydrogenase [Bacteroides eggerthii 1_2_48FAA] gi|316909099|gb|EFV30779.1| glycerol-3-phosphate dehydrogenase [Bacteroides eggerthii 1_2_48FAA] Length = 417 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 10/104 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++ + +C+ C C+ CP N +Y GP L R E+ E Sbjct: 1 MNMQQNNISENNFEQCIKCTVCTVYCPVIPVNP-KYPGPKQAGPDEERLRLKRGEYFDEA 59 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP + I ++ +K Sbjct: 60 LK---------YCLNCKRCEVACPSNVKIGDIIQLARIKYSKKK 94 >gi|307111880|gb|EFN60114.1| hypothetical protein CHLNCDRAFT_29307 [Chlorella variabilis] Length = 1098 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C ++CPS A+ + +R I++R Q +RLD + F Sbjct: 679 RCIECGFCESNCPSRDITLTPRQRIAVYKELFRMRSIENRTAAQQQRLDEMAQIFEYDGQ 738 Query: 228 HTI---MNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 T C + CP +N + I +++ + + + Sbjct: 739 DTCAADGMCQEKCPVKINTGELIKQLRSDEMAEAR 773 >gi|298506551|gb|ADI85274.1| iron-sulfur cluster-binding oxidoreductase, putative, rhodanese homology domain pair-containing [Geobacter sulfurreducens KN400] Length = 665 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 29/98 (29%), Gaps = 17/98 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D C C C C +L +A D R RLD Sbjct: 6 WSAGDVATRCTACGICVAEC--------AFLREHGTPKALAASFDPR------RLDQSHL 51 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 PF C C CP+G++PA ++ D Sbjct: 52 PFG---CSLCGLCRAVCPEGVDPAALFLAMRRATADAG 86 >gi|193215458|ref|YP_001996657.1| electron transport complex, RnfABCDGE type subunit C [Chloroherpeton thalassium ATCC 35110] gi|193088935|gb|ACF14210.1| electron transport complex, RnfABCDGE type, C subunit [Chloroherpeton thalassium ATCC 35110] Length = 441 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 53/220 (24%), Gaps = 45/220 (20%) Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 L + + + L + C G+ + + + I + Sbjct: 241 LINSITGRKIQEGELPFDKGCIVNNVGTAFAVYEAVCKNKPLIERVVTVSGIEI------ 294 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL------------ 167 K+L V + +S S + + + + + Sbjct: 295 QAKKNLKVIIGTMFSDIISACGNIPGTVNQVISGGPMMGKAQYSFEASIIKTSSGILFIN 354 Query: 168 ---------YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C +CP A R D Sbjct: 355 NEGLDTSRERTCIRCGKCVEACPQ------ELQPWLFTNLAQRREFDELP---------- 398 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L+ C +CT CP I K ++ +RK Sbjct: 399 --AYGLFNCTECGSCTYVCPSKREIVHWIKYSKAIVNNRK 436 >gi|39997612|ref|NP_953563.1| rhodanese-like domain/cysteine-rich domain-containing protein [Geobacter sulfurreducens PCA] gi|39984504|gb|AAR35890.1| rhodanese-like domain/cysteine-rich domain protein [Geobacter sulfurreducens PCA] Length = 665 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 29/98 (29%), Gaps = 17/98 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D C C C C +L +A D R RLD Sbjct: 6 WSAGDVATRCTACGICVAEC--------AFLREHGTPKALAASFDPR------RLDQSHL 51 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 PF C C CP+G++PA ++ D Sbjct: 52 PFG---CSLCGLCRAVCPEGVDPAALFLAMRRATADAG 86 >gi|116748265|ref|YP_844952.1| putative heterodisulfide reductase subunit C [Syntrophobacter fumaroxidans MPOB] gi|116697329|gb|ABK16517.1| putative heterodisulfide reductase, C subunit [Syntrophobacter fumaroxidans MPOB] Length = 192 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ SC + + Q +R + D + + C Sbjct: 29 SACMQCGTCTGSCANAFAMD------YTPRQLWRLVQLGEQ-------DEIFRSTTFWMC 75 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + CT CP+GL + I +K + R Sbjct: 76 SSCYYCTLRCPRGLPLTETIQALKRIAFARG 106 >gi|307636828|gb|ADN79278.1| hypothetical protein hp908_0147 [Helicobacter pylori 908] gi|325995417|gb|ADZ50822.1| Iron-sulfur cluster-binding protein [Helicobacter pylori 2018] gi|325997015|gb|ADZ49223.1| putative iron-sulfur protein [Helicobacter pylori 2017] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|208434094|ref|YP_002265760.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori G27] gi|208432023|gb|ACI26894.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori G27] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|728610|emb|CAA57037.1| heterodisulfide reductase [Methanothermobacter thermautotrophicus] Length = 185 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 13/92 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C+ SCPS G + + + + D + L+ Sbjct: 32 LEYCFQCGTCTGSCPS---------GRRTPYRVRQIIR----KANVGLKDEIISDPTLWM 78 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C + CP+ + + + Sbjct: 79 CTTCYYCQERCPRKVKIVDVVKLARNEAAKAG 110 >gi|57505840|ref|ZP_00371765.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Campylobacter upsaliensis RM3195] gi|57015870|gb|EAL52659.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Campylobacter upsaliensis RM3195] Length = 419 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 26/97 (26%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C +C + D P L + E E Sbjct: 1 MDFNQFSQSCVKCGKCIPTCTIHQIKRDEINSPRGFLDLLAAYKEGNLELDKEAKRV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP + AI ++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSHIRVDNAIEAVRYDIAKK 91 >gi|330992152|ref|ZP_08316100.1| Lactate utilization protein B [Gluconacetobacter sp. SXCC-1] gi|329760351|gb|EGG76847.1| Lactate utilization protein B [Gluconacetobacter sp. SXCC-1] Length = 508 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 18/101 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++ +C+ C C +CP + Y GP +ID F R Sbjct: 340 MEQFWTSLKCIRCGACMNTCPVFRRSGGLSYGATYAGPIG------LIIDP--TFNRHRY 391 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +L + +CT CP +N + IA + +L + Sbjct: 392 SSLP-----FSSTLNGSCTNVCPVKINIHEQIAGWRRVLAE 427 >gi|308061428|gb|ADO03316.1| iron-sulfur cluster binding protein [Helicobacter pylori Cuz20] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|258514634|ref|YP_003190856.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778339|gb|ACV62233.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 346 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 22/119 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----------------SDRYLGPAILLQ 198 ++ E + +C+ C C+ CP+ D + P Sbjct: 223 KNFEHPYWEELAAKCIGCGICTFVCPTCHCFNMIDTSRPDATGSRYRCHDSCMFPGFTKM 282 Query: 199 AYRWLIDS-RDEFQGER----LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A R E R L D + L C C CP ++ ++ I I+ Sbjct: 283 AGGHNPRPTRVERVRNRFMHKLKYHLDRYNLDGCSGCGRCIAKCPVNIDISQIITHIRE 341 >gi|188526942|ref|YP_001909629.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori Shi470] gi|188143182|gb|ACD47599.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori Shi470] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|160874492|ref|YP_001553808.1| hypothetical protein Sbal195_1374 [Shewanella baltica OS195] gi|160860014|gb|ABX48548.1| protein of unknown function DUF162 [Shewanella baltica OS195] gi|315266731|gb|ADT93584.1| protein of unknown function DUF162 [Shewanella baltica OS678] Length = 465 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A ++D + Sbjct: 313 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKIDDTNSIA 358 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 359 WACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAG 392 >gi|163848822|ref|YP_001636866.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Chloroflexus aurantiacus J-10-fl] gi|222526775|ref|YP_002571246.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Chloroflexus sp. Y-400-fl] gi|163670111|gb|ABY36477.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Chloroflexus aurantiacus J-10-fl] gi|222450654|gb|ACM54920.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Chloroflexus sp. Y-400-fl] Length = 408 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWW----NSDRYLGPAILLQAYRWLIDSRDEFQ 211 H + L C+ C C+++CP +Y+GP Q +R + Sbjct: 1 MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQA--QRFRHAAQPVPDA- 57 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C Q CP G+ A+ A+ + ++ + Sbjct: 58 -----------SVDYCSGCRVCNQVCPTGVRIAELNARARAQIVAER 93 >gi|317176955|dbj|BAJ54744.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori F16] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|213024291|ref|ZP_03338738.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 183 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKY 83 >gi|78189542|ref|YP_379880.1| heterodisulfide reductase, putative [Chlorobium chlorochromatii CaD3] gi|78171741|gb|ABB28837.1| putative adenylylsulfate reductase-associated electron transfer protein QmoC [Chlorobium chlorochromatii CaD3] Length = 392 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + +C CA CS CP + + P + +W + + E L + + ++ Sbjct: 24 MKKCYQCATCSVVCP---LSPNDRPFPRKEMVMAQWGL------KDELLKSAD----IWL 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C++ CP+G P +A ++ ++ Sbjct: 71 CHNCNDCSKHCPRGARPGDVLAILRKSVIQE 101 >gi|54309526|ref|YP_130546.1| putative electron transport protein ykgF [Photobacterium profundum SS9] gi|46913962|emb|CAG20744.1| putative electron transport protein ykgF [Photobacterium profundum SS9] Length = 469 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV CA C +CP+Y Y GP + L+ D+F+ Sbjct: 312 RCVRCAACVNTCPAYRHIGGQSYGSIYSGPIGAV--LSPLLGGYDDFKDL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + + + K + + + KI Sbjct: 360 PYACSLCRACHDVCPVKIPLSDLLLKHRQKMGEEKI 395 >gi|219670530|ref|YP_002460965.1| hypothetical protein Dhaf_4528 [Desulfitobacterium hafniense DCB-2] gi|219540790|gb|ACL22529.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 694 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 70/241 (29%), Gaps = 47/241 (19%) Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI---AVYP 115 L L + + DP + I M LA K + + Sbjct: 165 FLLQGLRMAGEHDPWAVYGFAGYWMIEPLQAMFSQEQ-LLAMHKFTWWFHMFVAFGFIAY 223 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL----YECV 171 LP+ + + ++ F + + ++E E +Q C+ Sbjct: 224 LPYSKLFHIFLGPLNQFLRKREPMGVPELIDFEDESQETFGLSEFKQLSWKAIFNSDVCI 283 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQA--------YRWLIDSRDEFQGE---------- 213 C C +CP+ S ++L P ++Q Y+ + ++ E + Sbjct: 284 RCGRCQENCPA--TVSGKHLNPKQIIQDIKVRAEEEYQAVCQAKKEAKQAGRQAGVMASG 341 Query: 214 -------------------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + ++ C T +C Q CP + +++ L Sbjct: 342 ETATAVEGTAALAIPPGRGLIGEVIQEQDIWDCTTCRSCEQQCPVFVEHVDKTVEMRRNL 401 Query: 255 L 255 + Sbjct: 402 V 402 >gi|301310760|ref|ZP_07216699.1| putative iron-sulfur cluster binding protein [Bacteroides sp. 20_3] gi|300832334|gb|EFK62965.1| putative iron-sulfur cluster binding protein [Bacteroides sp. 20_3] Length = 455 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + Y P + L + E + Sbjct: 302 NCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLRNPE-----------EYSDNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++C+ CP ++ + I + + L Sbjct: 351 ACSLCLSCSNVCPVKIDLGEQIYRWRQDL 379 >gi|315586141|gb|ADU40522.1| iron-sulfur cluster-binding protein [Helicobacter pylori 35A] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|269126235|ref|YP_003299605.1| iron-sulfur cluster binding protein [Thermomonospora curvata DSM 43183] gi|268311193|gb|ACY97567.1| iron-sulfur cluster binding protein [Thermomonospora curvata DSM 43183] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 42/176 (23%), Gaps = 16/176 (9%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W Sbjct: 234 NGRMCLTLPQTLISVMGIEKVLPTWRDLEVFLQLLPRSSTAERMNPYTSTWTGVTPGDGP 293 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRW 202 +E D + L C+ C+ C CP Y Y P Sbjct: 294 REFHLVLLDNGRTATLADPVGRQALRCIRCSACLNVCPVYARAGGHAYGSPYPGPIGAIL 353 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R D Y C + CP ++ + + ++ + Sbjct: 354 SPQIRGIGSP------VDASLPYASSLCGACLEVCPVAIDIPEVLVHLRAKAVAEG 403 >gi|15644768|ref|NP_206938.1| putative iron-sulfur protein [Helicobacter pylori 26695] gi|2313222|gb|AAD07206.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori 26695] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|315638022|ref|ZP_07893207.1| iron-sulfur cluster-binding domain protein [Campylobacter upsaliensis JV21] gi|315481870|gb|EFU72489.1| iron-sulfur cluster-binding domain protein [Campylobacter upsaliensis JV21] Length = 419 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 26/97 (26%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C +C + D P L + E E Sbjct: 1 MDFNQFSQSCVKCGKCIPTCTIHQIKRDEINSPRGFLDLLAAYKEGNLELDKEAKRV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP + AI ++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSHIRVDNAIEAVRYDIAKK 91 >gi|308062998|gb|ADO04885.1| iron-sulfur cluster binding protein [Helicobacter pylori Sat464] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|317181448|dbj|BAJ59232.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori F57] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|261837589|gb|ACX97355.1| iron-sulfur protein [Helicobacter pylori 51] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|86159398|ref|YP_466183.1| hypothetical protein Adeh_2976 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775909|gb|ABC82746.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 458 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + + I L RD L + Sbjct: 302 CIRCGACMNTCPVFRRSGGYSYAWTIPGPIGSVLAPGRDPVAHGSLP--------FASSL 353 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C CP + + + ++ Sbjct: 354 CGSCDAVCPVKIPLHDQLLARRREVVRAG 382 >gi|46201339|ref|ZP_00055260.2| COG0277: FAD/FMN-containing dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 877 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 10/91 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPFRL 224 C+ C C CPS+ L P + ++R + SR E L L + Sbjct: 483 DTCIECGFCERMCPSHGLT----LSPRQRITSWREI--SRRAAANENADELRRLYGYQGI 536 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK-MML 254 C C SCP G+ + ++ L Sbjct: 537 DTCAACGLCATSCPVGIETGRLTKSLRGRRL 567 >gi|320352155|ref|YP_004193494.1| heterodisulfide reductase subunit C-like protein [Desulfobulbus propionicus DSM 2032] gi|320120657|gb|ADW16203.1| heterodisulfide reductase subunit C-like protein [Desulfobulbus propionicus DSM 2032] Length = 167 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 12/89 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ C CS CP P + R L Q L+ + + Sbjct: 21 HNILNCIQCGACSAVCPGVRAG-----FPLLCRTLIRHL-------QSGELEEIIEDASS 68 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C CT+ CP+ + P + + + Sbjct: 69 WGCQACNRCTEVCPRDVRPQEVVFAFRRY 97 >gi|317179942|dbj|BAJ57728.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori F32] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|317179466|dbj|BAJ57254.1| conserved hypothetical iron-sulfur protein [Helicobacter pylori F30] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|312869751|ref|ZP_07729897.1| iron-sulfur cluster-binding protein [Lactobacillus oris PB013-T2-3] gi|311094723|gb|EFQ53021.1| iron-sulfur cluster-binding protein [Lactobacillus oris PB013-T2-3] Length = 503 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 26/84 (30%), Gaps = 9/84 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ C C CP Y + G E L E L Y C Sbjct: 311 QCIRCGACMNVCPVYRQIGGKAYG--------SIYPGPLGEVLSPILGGYEQFQELPYAC 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 CT++CP + I + + Sbjct: 363 SLCAACTETCPVKIPLQHLIREHR 386 >gi|288819176|ref|YP_003433524.1| heterodisulfide reductase subunit C [Hydrogenobacter thermophilus TK-6] gi|288788576|dbj|BAI70323.1| heterodisulfide reductase subunit C [Hydrogenobacter thermophilus TK-6] gi|308752758|gb|ADO46241.1| heterodisulfide reductase subunit C [Hydrogenobacter thermophilus TK-6] Length = 253 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 10/91 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C+ C+ SCP + + +RY + A +ID +R D + +RC Sbjct: 62 QCYQCSYCTASCPVHNYWDERYNPRHFIYLARLGMIDEL----QKRADVM------WRCV 111 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + CT CPKG+ + + I + + + Sbjct: 112 SCHKCTHRCPKGVLVEEVLKVILRTMAKKGL 142 >gi|217033704|ref|ZP_03439131.1| hypothetical protein HP9810_5g46 [Helicobacter pylori 98-10] gi|216943893|gb|EEC23330.1| hypothetical protein HP9810_5g46 [Helicobacter pylori 98-10] Length = 429 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|147677741|ref|YP_001211956.1| hypothetical protein PTH_1406 [Pelotomaculum thermopropionicum SI] gi|146273838|dbj|BAF59587.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 346 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 22/119 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS------DRYLGPAILLQAYRWLID---- 205 ++ E +C+ C C+ CP+ + G D Sbjct: 223 ENFELPYWDKVFKKCLGCGICTYVCPTCHCFDIFDFTTGDFTGERFRCWDSCMFPDFTLM 282 Query: 206 -----SRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + + D + + C C CP ++ I +K Sbjct: 283 AGGHNPRPTKKERVRNRFMHKLKYHLDRYNIAGCVGCGRCIAKCPVNIDITAIIKDLKE 341 >gi|76666810|emb|CAJ31188.1| Reductase, iron-sulfur binding subunit containing response regulator receiver [uncultured sulfate-reducing bacterium] Length = 590 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 16/115 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLI 204 +RQ + L C C C+ SC + + D + PA R + + Sbjct: 19 NRQHVLSLSACAHCGMCNDSCHYFLADGDPKMTPAAKADRIRSVYKGFYDWIGKFVPFWV 78 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +R L+ L+D F C CT +CP G++ A + + L+D + Sbjct: 79 GARKIQTDGDLEELKDVF-FGSCTGCRRCTLNCPFGVDMAAIVGLTRSCLVDVGV 132 >gi|15922184|ref|NP_377853.1| hypothetical protein ST1871 [Sulfolobus tokodaii str. 7] gi|15622973|dbj|BAB66962.1| 230aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 230 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 11/95 (11%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C C C++ C + Y + A + E Q L Sbjct: 58 YTISACWQCGTCTSGC-TMREYDPNYSPRRFIDLARKGDKQGLIELQ----------NSL 106 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +RC + CT CPKG+ + + I LL + Sbjct: 107 WRCVSCQKCTHRCPKGVLVEEVVHAIHNYLLKHGL 141 >gi|301301364|ref|ZP_07207506.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851024|gb|EFK78766.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 505 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C CP Y + G P L + ++ +EF Y Sbjct: 311 QCIRCGACMNVCPVYRHIGGKGYGSIYPGPLGKVLSPILGGYEEF----------EDLPY 360 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT++CP + I K +++ +D+K Sbjct: 361 ACSLCAACTETCPVKIPLHNLIRKHRIVEMDKK 393 >gi|299066623|emb|CBJ37813.1| putative oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum CMR15] Length = 469 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 35/195 (17%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + +SI + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQSISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A E + C+ C C CP Y Sbjct: 270 SLLTGPRAAGEQDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y GP + ++ S + ++ P C + CP + + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLS---------NAIDLPQAA---TLCGECNRVCPASIPLS 377 Query: 245 KAIAKIKMMLLDRKI 259 + ++ ++R++ Sbjct: 378 DLLRTLREKQMEREL 392 >gi|262202796|ref|YP_003274004.1| iron-sulfur cluster-binding protein [Gordonia bronchialis DSM 43247] gi|262086143|gb|ACY22111.1| iron-sulfur cluster binding protein [Gordonia bronchialis DSM 43247] Length = 478 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 310 RCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI----LTPQLRGTSSA------VDQSL 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C CP +N + ++ ++D K Sbjct: 360 PYASSLCGACFDVCPVRINIPDILVHLRTRVVDEK 394 >gi|222431571|gb|ACM50727.1| fumarate reductase iron-sulfur subunit [synthetic construct] Length = 67 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 42 NPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACV 101 P Y V D +LD L YIK+ + P L+ R SCR ICGSCGM ++ LAC Sbjct: 2 APHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACK 60 Query: 102 KDMKDI 107 ++D Sbjct: 61 TFLRDY 66 >gi|256828658|ref|YP_003157386.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577834|gb|ACU88970.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfomicrobium baculatum DSM 4028] Length = 318 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--DNL 218 + + C+ C C +CP L S+D E + + Sbjct: 196 AFWQETMSRCIRCYACRNACPMCVCRDHCIATSRDPLWI------SQDNSPAENMMFQMV 249 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + ++ + + Sbjct: 250 HVSHLAGRCTECGECERACPVDIPLM----LLRRWMNKQ 284 >gi|217031897|ref|ZP_03437399.1| hypothetical protein HPB128_3g16 [Helicobacter pylori B128] gi|298736918|ref|YP_003729448.1| hypothetical protein HPB8_1427 [Helicobacter pylori B8] gi|216946366|gb|EEC24971.1| hypothetical protein HPB128_3g16 [Helicobacter pylori B128] gi|298356112|emb|CBI66984.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|210134337|ref|YP_002300776.1| iron-sulfur electron transport protein [Helicobacter pylori P12] gi|210132305|gb|ACJ07296.1| iron-sulfur electron transport protein [Helicobacter pylori P12] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|2828559|gb|AAC38284.1| intergenic sequence protein 2 [Thiocapsa roseopersicina] Length = 439 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 35/111 (31%), Gaps = 23/111 (20%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLID----------------SR 207 CV C C+ +CP Y D P + L+ R W D Sbjct: 42 FFSSCVHCGICAQACPFYLETGDPKYTPILKLEPLRRVWENDFTLWGKIKGLFGLNHKVT 101 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D E + L D C C+ CP G + A I K + ++ Sbjct: 102 DAMLAEWEELLYD-----SCSMCGRCSMVCPVGNDLALMIRKSREGMVQAG 147 >gi|73427085|gb|AAZ76122.1| succinate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 34 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/32 (68%), Positives = 24/32 (75%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RCH+IMNC CPKGLNP +AI IK MLL R Sbjct: 1 RCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 32 >gi|154245712|ref|YP_001416670.1| hypothetical protein Xaut_1768 [Xanthobacter autotrophicus Py2] gi|154159797|gb|ABS67013.1| protein of unknown function DUF162 [Xanthobacter autotrophicus Py2] Length = 490 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 28/99 (28%), Gaps = 17/99 (17%) Query: 166 GLYECVMCACCSTSCPSYWW-----NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP Y Y GP + + +G L N Sbjct: 312 EMLRCIRCGACMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALI----GIEKGANLPNAS- 366 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP + K + + +R + Sbjct: 367 -------TFCGRCEEVCPVRIPLPKLMRHWREKEFERHL 398 >gi|294637808|ref|ZP_06716081.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Edwardsiella tarda ATCC 23685] gi|291089048|gb|EFE21609.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Edwardsiella tarda ATCC 23685] Length = 399 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C+T CP N Y GP D + D Sbjct: 6 DNSFEQCIKCTVCTTYCPVAKVNP-AYPGPKQA---------GPDGERLRLKDPQLYDEA 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 56 LKYCTNCKRCEVACPSDVKIGDIILRAK 83 >gi|258404550|ref|YP_003197292.1| putative heterodisulfide reductase, C subunit [Desulfohalobium retbaense DSM 5692] gi|257796777|gb|ACV67714.1| putative heterodisulfide reductase, C subunit [Desulfohalobium retbaense DSM 5692] Length = 194 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS SCP+ L P Q +R ++ + +++ + C Sbjct: 24 CMQCGTCSASCPNSGAMD---LTPR---QVWRLVLLGQ-------FEDIWHSHTFWLCSN 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CP+GL +A+ +K + + Sbjct: 71 CYTCTLRCPRGLPLTEAVNTLKRLAPRETL 100 >gi|15645290|ref|NP_207460.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori 26695] gi|2313788|gb|AAD07728.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori 26695] Length = 433 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 71 CTACVEICPFHLPIDTLIEKAREKIAQK 98 >gi|15611196|ref|NP_222847.1| putative iron-sulfur protein [Helicobacter pylori J99] gi|4154633|gb|AAD05703.1| putative [Helicobacter pylori J99] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|332298659|ref|YP_004440581.1| heterodisulfide reductase subunit C-like protein [Treponema brennaborense DSM 12168] gi|332181762|gb|AEE17450.1| heterodisulfide reductase subunit C-like protein [Treponema brennaborense DSM 12168] Length = 130 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + L+ R +C+ C CS +CPSY + Y + I+ Sbjct: 1 MENKNLREQIIRSSGVNPRKCMKCGKCSATCPSY--DEMEYHPHQFVAMVESGNIEP--- 55 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + LYRC + C CP+ + PAK + +++ ++ ++ Sbjct: 56 --------LLNSKSLYRCLSCFACVDRCPRNVEPAKLVEAVRLAVIRQQ 96 >gi|290955516|ref|YP_003486698.1| iron-sulfur protein [Streptomyces scabiei 87.22] gi|260645042|emb|CBG68128.1| putative iron-sulfur protein [Streptomyces scabiei 87.22] Length = 495 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 5/95 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L + E +L L Sbjct: 316 RQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAILSPQLRGTRSEVDASLPYASSL 375 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP ++ + + ++ + I Sbjct: 376 -----CGACYEVCPVAIDIPEVLVHLRERVAQGGI 405 >gi|257066815|ref|YP_003153071.1| electron transport complex, RnfABCDGE type, C subunit [Anaerococcus prevotii DSM 20548] gi|256798695|gb|ACV29350.1| electron transport complex, RnfABCDGE type, C subunit [Anaerococcus prevotii DSM 20548] Length = 439 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + K + +L D + + C+ C C CP Y L +++ + Sbjct: 343 RPTEKASNCVLVLASDEAEPLEVSPCIRCGRCVDVCPVYLL----------PLYIHKFSL 392 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + R E E L+ ++ C +C+ CP +AI K + Sbjct: 393 EERFEKAQE-LNIMD-------CIECGSCSFVCPSNRPLVEAIKFGKRQIRQAG 438 >gi|207092423|ref|ZP_03240210.1| putative iron-sulfur protein [Helicobacter pylori HPKX_438_AG0C1] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|332797371|ref|YP_004458871.1| heterodisulfide reductase subunit C [Acidianus hospitalis W1] gi|332695106|gb|AEE94573.1| heterodisulfide reductase, subunit C (HdrC-1) [Acidianus hospitalis W1] Length = 277 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + R+++ + D + + L C+ C C++ CP+ + GP Sbjct: 27 EEQRNLDRLPPDQRQLAEEFWKAVKSDFRFNEYLRGCLNCGVCTSGCPAAKFYD---FGP 83 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++Q RDE + + ++ C C+ CP A I ++ Sbjct: 84 REMIQYM-----MRDEADK-IWEFVNKK--VWACVQCYTCSMRCPFNNEIAGLIMLLREY 135 Query: 254 LLD 256 + Sbjct: 136 AVQ 138 >gi|332672980|gb|AEE69797.1| iron-sulfur cluster-binding protein [Helicobacter pylori 83] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|308063541|gb|ADO05428.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori Sat464] Length = 429 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|218131981|ref|ZP_03460785.1| hypothetical protein BACEGG_03604 [Bacteroides eggerthii DSM 20697] gi|217985857|gb|EEC52197.1| hypothetical protein BACEGG_03604 [Bacteroides eggerthii DSM 20697] Length = 421 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 10/108 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 E++ ++ + +C+ C C+ CP N +Y GP L R E+ Sbjct: 1 MDEIMNMQQNNISENNFEQCIKCTVCTVYCPVIPVNP-KYPGPKQAGPDEERLRLKRGEY 59 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E L C C +CP + I ++ +K Sbjct: 60 FDEALK---------YCLNCKRCEVACPSNVKIGDIIQLARIKYSKKK 98 >gi|78042735|ref|YP_359294.1| putative glycolate oxidase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77994850|gb|ABB13749.1| putative glycolate oxidase, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 414 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y +Q + + + + + Sbjct: 5 KQEFLKCMRCGNCQAVCPIYKETKMEAEVARGKIQLIKGVTEGVLKPTE------YLAEK 58 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C T + C ++CP G+N K + + L Sbjct: 59 IATCLTCLACQENCPSGVNYEKILLYGRDYLAKE 92 >gi|323700053|ref|ZP_08111965.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio sp. ND132] gi|323459985|gb|EGB15850.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio desulfuricans ND132] Length = 423 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 13/97 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D L +C CA CS CP +D ++ A L D L Sbjct: 18 QAVGGDSLKKCYQCATCSVVCPL--SPADSPYPRKEMVWAQWGLKD-----------RLV 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ CH C+ CP+G P ++ ++ M Sbjct: 65 NDIDIWLCHNCGTCSDLCPRGAKPGDLLSALRNMAYR 101 >gi|317013557|gb|ADU80993.1| iron-sulfur cluster binding protein [Helicobacter pylori Gambia94/24] Length = 481 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C CT+ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|282163777|ref|YP_003356162.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanocella paludicola SANAE] gi|282156091|dbj|BAI61179.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanocella paludicola SANAE] Length = 320 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 21/86 (24%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C CPS L P L+ R E Sbjct: 1 MSRKCIKCGVCEMVCPST-------LSPLRLIDNKRSRNQPLPEALD------------- 40 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G++ K+I K++ Sbjct: 41 -CTTCNACVAACPMGVHITKSIEKMR 65 >gi|210134873|ref|YP_002301312.1| anaerobic glycerol-3-phosphate dehydrogenase [Helicobacter pylori P12] gi|210132841|gb|ACJ07832.1| anaerobic glycerol-3-phosphate dehydrogenase [Helicobacter pylori P12] Length = 433 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 71 CTACVEICPFHLPIDTLIEKAREKIAQK 98 >gi|117925641|ref|YP_866258.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Magnetococcus sp. MC-1] gi|117609397|gb|ABK44852.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Magnetococcus sp. MC-1] Length = 477 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 39/143 (27%), Gaps = 3/143 (2%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K AI + +I L + FY P Sbjct: 141 PWTAHKWAIKIAKHATWMLIGVLTGGVFVFYFADAPTLMGQFIDGTAPFPAWFTMGFLAL 200 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C CP + + I++ + L + R+ + R E+P Sbjct: 201 TTYTMAGFAREQVCIYMCPYARFQGAMFDEDTIIIAYHNELGEPRESNRRVR---QENPD 257 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 ++ C C CP G++ Sbjct: 258 QVGWCIDCNECVTVCPTGIDIRD 280 >gi|11498269|ref|NP_069495.1| heterodisulfide reductase, subunit E, putative [Archaeoglobus fulgidus DSM 4304] gi|2649958|gb|AAB90580.1| heterodisulfide reductase, subunit E, putative [Archaeoglobus fulgidus DSM 4304] Length = 379 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP + + P + +W + D L ++ Sbjct: 19 LRKCYQCATCSVVCPQ---SPEEAPFPRKEMIWAQWGL----------KDKLIKDADVWL 65 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C++ CP+G P + + I+ ++ Sbjct: 66 CHQCNDCSEYCPRGAKPGEVLGAIRAKVIQE 96 >gi|317008810|gb|ADU79390.1| iron-sulfur cluster binding protein [Helicobacter pylori India7] Length = 481 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 23/96 (23%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 NL C CT+ CP + A+ I ++ Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLR 388 >gi|291544144|emb|CBL17253.1| hypothetical protein RUM_11000 [Ruminococcus sp. 18P13] Length = 331 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + + L C+ C C CP+ + P ++ Sbjct: 187 DEVEQIERMTPDERYAFWQGELSRCIRCNACRDVCPACTCEKCVFDNPQSGVE----NKA 242 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 F+ + + RC C++ CP+ + Sbjct: 243 PATSFEEQMFHIIRAFHVAGRCTDCGECSRVCPQHIPL 280 >gi|261839002|gb|ACX98767.1| putative iron-sulfur protein [Helicobacter pylori 52] Length = 481 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 23/96 (23%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 NL C CT+ CP + A+ I ++ Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLR 388 >gi|474045|emb|CAA53457.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 98 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 2/98 (2%) Query: 102 KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--PKPAKELLQSHE 159 K + +Y L HM V+KDLV D+S F+ Q+RSI+PWL+ K++ QS + Sbjct: 1 KIDTGLSKTTKIYSLSHMYVMKDLVPDLSLFFEQYRSIQPWLQKNEKLTLGEKQMFQSAD 60 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + +IDGLYEC++CACCS+SCPSYWWN+D+YLGPA+L+ Sbjct: 61 EVPRIDGLYECILCACCSSSCPSYWWNADKYLGPAVLM 98 >gi|15790844|ref|NP_280668.1| glycerol-3-phosphate dehydrogenase chain C [Halobacterium sp. NRC-1] gi|169236590|ref|YP_001689790.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Halobacterium salinarum R1] gi|10581405|gb|AAG20148.1| glycerol-3-phosphate dehydrogenase chain C [Halobacterium sp. NRC-1] gi|167727656|emb|CAP14444.1| glycerol-3-phosphate dehydrogenase subunit C [Halobacterium salinarum R1] Length = 465 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 7/105 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +D C C+ C T+CP + D + +R S DE Sbjct: 34 HDDTDDFDLRPESDSCYKCSTCDTNCPVAEVDDDFPGPKFQGPEQWRLKEQSDDEDHEI- 92 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C +CP G++ ++ + +D ++ Sbjct: 93 ------DDSITECSNCMRCDSACPSGVSLSQMHNTARGEYVDDQM 131 >gi|300087812|ref|YP_003758334.1| hypothetical protein Dehly_0706 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527545|gb|ADJ26013.1| protein of unknown function DUF224 cysteine-rich region domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 380 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 +C+ C CS CP W + +L R RL + + ++R Sbjct: 23 SKCIQCGTCSGICP--WRDYLSFL--------------PRKIINETRLGLTDFESETIWR 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C T +C CP+ + + + ++ + Sbjct: 67 CVTCGSCLDVCPRQIPVIEIMVALRKAV 94 >gi|260892800|ref|YP_003238897.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ammonifex degensii KC4] gi|260864941|gb|ACX52047.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ammonifex degensii KC4] Length = 367 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 13/88 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C CS CP N P Q R+ G L P ++ C+ Sbjct: 25 CFNCGNCSAICPLAETN------PFYPRQIIRY------AQLGATKKILGSP-AIWLCYH 71 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT CP+ +P + I ++ + + Sbjct: 72 CGECTTMCPRQADPGEVIMSLRRWAIAQ 99 >gi|227891113|ref|ZP_04008918.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius ATCC 11741] gi|227866987|gb|EEJ74408.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius ATCC 11741] Length = 505 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C CP Y + G P L + ++ +EF Y Sbjct: 311 QCIRCGACMNVCPVYRHIGGKGYGSIYPGPLGKVLSPILGGYEEF----------EDLPY 360 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT++CP + I K +++ +D+K Sbjct: 361 ACSLCAACTETCPVKIPLHNLIRKHRIVEMDKK 393 >gi|261839507|gb|ACX99272.1| glycerol-3-phosphatedehydrogenase [Helicobacter pylori 52] Length = 429 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|220918271|ref|YP_002493575.1| protein of unknown function DUF162 [Anaeromyxobacter dehalogenans 2CP-1] gi|219956125|gb|ACL66509.1| protein of unknown function DUF162 [Anaeromyxobacter dehalogenans 2CP-1] Length = 458 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + + I L RD L + Sbjct: 302 CIRCGACMNTCPVFRRSGGYSYAWTIPGPIGSVLAPGRDPAAHGSLP--------FASSL 353 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C CP + + + ++ Sbjct: 354 CGSCGAVCPVKIPLHDQLLARRREVVRAG 382 >gi|123440607|ref|YP_001004601.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087568|emb|CAL10349.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 407 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 26/91 (28%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C+T CP N Y GP D + D Sbjct: 1 MARDKSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPALY 50 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I + K Sbjct: 51 DDALKYCTNCKRCEVACPSDVKIGDIIQRAK 81 >gi|90962091|ref|YP_536007.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius UCC118] gi|90821285|gb|ABD99924.1| iron-sulfur cluster-binding protein [Lactobacillus salivarius UCC118] gi|300214781|gb|ADJ79197.1| Iron-sulfur cluster-binding protein [Lactobacillus salivarius CECT 5713] Length = 505 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C CP Y + G P L + ++ +EF Y Sbjct: 311 QCIRCGACMNVCPVYRHIGGKGYGSIYPGPLGKVLSPILGGYEEF----------EDLPY 360 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT++CP + I K +++ +D+K Sbjct: 361 ACSLCAACTETCPVKIPLHNLIRKHRIVEMDKK 393 >gi|116747464|ref|YP_844151.1| methyl-viologen-reducing hydrogenase subunit delta [Syntrophobacter fumaroxidans MPOB] gi|116696528|gb|ABK15716.1| methyl-viologen-reducing hydrogenase, delta subunit [Syntrophobacter fumaroxidans MPOB] Length = 540 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSP--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 L+ ++ F Q R + T P +PA + ++ + K +Y C C CS++CP Sbjct: 126 LLDFLNDFTDQVRGMGKSPVTPVPLKQPAHDGRRNTAEVLKAHDVYACQDCGKCSSACPM 185 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + R + +S G + D ++ C T C CP ++ Sbjct: 186 AL---------SGRPYSPRAIANSIIAGSGNTPAVVND---VWSCLTCGICYDRCPSAVD 233 Query: 243 PAKAIAKIK 251 I +++ Sbjct: 234 FPAFIREMR 242 >gi|110634768|ref|YP_674976.1| formate dehydrogenase, alpha subunit [Mesorhizobium sp. BNC1] gi|110285752|gb|ABG63811.1| NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein [Chelativorans sp. BNC1] Length = 929 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 56/177 (31%), Gaps = 32/177 (18%) Query: 82 EGICGSCGMNIDGTNTLACV--------------KDMKDIKGAIAVYPL-PHMSVIKDLV 126 +G C +C ++I+G LA + + L +M + + Sbjct: 47 DGNCRACMVDIEGERVLAASCIRRPTAGMVVNTSTERARKSREMVFELLASNMRPVSEGP 106 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI---DGLYECVMCACCSTSCPSY 183 S F+ S+ K A++ + + D L C+ C C +C Sbjct: 107 DQQSLFWQWANSMGISGNRYGSKFAQDSVPAEFDVTNPAIAVNLDACIACGACVRACREV 166 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP L C T C Q+CP G Sbjct: 167 QVND--VIGMAERGNHSVPVFD------------MHDPMGLSTCVTCGECVQACPTG 209 >gi|328545100|ref|YP_004305209.1| Iron-sulfur cluster binding protein [polymorphum gilvum SL003B-26A1] gi|326414842|gb|ADZ71905.1| Iron-sulfur cluster binding protein [Polymorphum gilvum SL003B-26A1] Length = 478 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 39/142 (27%), Gaps = 17/142 (11%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +D+ V + R+ +P + +S + + C+ C C CP Sbjct: 267 QDMSVYTTLSTGPRRAADPDGPDEYHVILLDNGRSAMLGSEYQEMLRCIRCGACMNHCPV 326 Query: 183 YW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 Y Y GP + + Q L N C C Sbjct: 327 YHSIGGHAYGWVYPGPMGAVLTPSLI----GVEQAGHLPNAS--------TFCGRCEAVC 374 Query: 238 PKGLNPAKAIAKIKMMLLDRKI 259 P + K + + +R + Sbjct: 375 PMRIPLPKMMRHWREREFERNL 396 >gi|254778854|ref|YP_003056959.1| putative iron-sulfur cluster binding protein [Helicobacter pylori B38] gi|254000765|emb|CAX28689.1| Putative iron-sulfur cluster binding protein [Helicobacter pylori B38] Length = 481 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 23/96 (23%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 NL C CT+ CP + A+ I ++ Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLR 388 >gi|238064618|ref|ZP_04609327.1| iron-sulfur cluster binding protein [Micromonospora sp. ATCC 39149] gi|237886429|gb|EEP75257.1| iron-sulfur cluster binding protein [Micromonospora sp. ATCC 39149] Length = 476 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 15/90 (16%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + + +D L Sbjct: 314 RCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAILSPQLT--GQDAGANRTLP------- 364 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Y C CP +N + + ++ Sbjct: 365 -YASTLCGACYDVCPVKINIPEILVHLRQA 393 >gi|317011982|gb|ADU82590.1| iron-sulfur cluster binding protein [Helicobacter pylori Lithuania75] Length = 481 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 23/96 (23%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 NL C CT+ CP + A+ I ++ Sbjct: 361 PNL--------CSLCGRCTEVCPVEIPLAELIRDLR 388 >gi|260662319|ref|ZP_05863215.1| iron-sulfur cluster-binding protein [Lactobacillus fermentum 28-3-CHN] gi|260553702|gb|EEX26594.1| iron-sulfur cluster-binding protein [Lactobacillus fermentum 28-3-CHN] Length = 505 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 9/84 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ C C CP Y + G E L E L Y C Sbjct: 311 QCIRCGACMNVCPVYRHIGGQGYG--------SIYPGPLGEVLSPILGGYEKFEELPYAC 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 CT++CP + I K + Sbjct: 363 SLCGACTETCPVRIPLHSLIRKHR 386 >gi|288931322|ref|YP_003435382.1| CoB--CoM heterodisulfide reductase [Ferroglobus placidus DSM 10642] gi|288893570|gb|ADC65107.1| CoB--CoM heterodisulfide reductase [Ferroglobus placidus DSM 10642] Length = 375 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 8/101 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD--N 217 ++ D + C C C CP++ P + + LI R E + E LD Sbjct: 4 EKLVEDEAFICAQCNFCR-VCPAFKHEDWESASPRGRIYLIKSLI--RGEIKPEDLDEEI 60 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++D ++C T C C + K + L+ Sbjct: 61 IQD---FFKCTTCGECEVVCQTEIPLIDVWEKARASLVKEG 98 >gi|212550595|ref|YP_002308912.1| heterodisulfide reductase subunit C [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548833|dbj|BAG83501.1| heterodisulfide reductase subunit C [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 181 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 10/99 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + C C CS CP P ++++ ++ + ++ E + Sbjct: 13 RYTGISIVRCYQCGKCSAGCPMSENMD---FTPNVIMR----MLQTEEKDTDE---QILG 62 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C + C CP +N K + ++ L + + Sbjct: 63 SQSIWLCTSCEMCVSRCPMEINIPKIMDYLRQHSLKKGL 101 >gi|312139057|ref|YP_004006393.1| l-lactate utilization lutb protein [Rhodococcus equi 103S] gi|311888396|emb|CBH47708.1| L-lactate utilization LutB protein [Rhodococcus equi 103S] Length = 503 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 51/182 (28%), Gaps = 28/182 (15%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W Sbjct: 245 NGRMCLTLPQTLITVMGIEKVIPTYRDLEVFLQLLPRSSTGERMNPYTSMWTGVTPDDGP 304 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + L C+ C+ C CP Y Y GP + Sbjct: 305 QNFHLVLLDNGRTAALADSVGREALNCIRCSACLNVCPVYERTGGHAYGSTYPGPIGAVL 364 Query: 199 AYRWL-IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +D +D DP + C ++CP ++ + +++ + Sbjct: 365 TPQLAGMDGKD-----------DPNSTLPFASSLCGACFEACPVKIDIPSLLVELRHQKV 413 Query: 256 DR 257 ++ Sbjct: 414 EK 415 >gi|261838094|gb|ACX97860.1| anaerobic glycerol-3-phosphate dehydrogenase [Helicobacter pylori 51] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|226312640|ref|YP_002772534.1| hypothetical protein BBR47_30530 [Brevibacillus brevis NBRC 100599] gi|226095588|dbj|BAH44030.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 499 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 20/96 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y Y GP + D L + Sbjct: 313 NCIRCGACLNACPVYRHVGGHAYGWVYSGPIGAVLTPLLHED----------KELANASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C ++CP + + ++ + Sbjct: 363 L-----CGACYEACPVKIPLHDMFVYQRRRNVEEAL 393 >gi|208434588|ref|YP_002266254.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori G27] gi|208432517|gb|ACI27388.1| glycerol-3-phosphate dehydrogenase [Helicobacter pylori G27] Length = 433 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 71 CTACVEICPFHLPIDTLIEKAREKIAQK 98 >gi|188527485|ref|YP_001910172.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori Shi470] gi|188143725|gb|ACD48142.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori Shi470] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|317181979|dbj|BAJ59763.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Helicobacter pylori F57] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|308182844|ref|YP_003926971.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori PeCan4] gi|308065029|gb|ADO06921.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori PeCan4] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|297570634|ref|YP_003696408.1| iron-sulfur cluster binding protein [Arcanobacterium haemolyticum DSM 20595] gi|296930981|gb|ADH91789.1| iron-sulfur cluster binding protein [Arcanobacterium haemolyticum DSM 20595] Length = 508 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 26/181 (14%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V V L+ S + W Sbjct: 253 NGRMCLTLPETLISVVGIEKMVPTFQDAEVFAQLLPRSSTGERMNPYTSMWTGVTPGDGP 312 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 +E D + L C+ CA C +CP Y + Y GP + Sbjct: 313 QEFHLVLLDNGRTKVLADEIGRQALHCIRCAACMNACPVYEHVGGHAYNSVYPGPIGAIL 372 Query: 199 AYRWL--IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + L +D D Y C + CP +N + + ++ + + Sbjct: 373 TPQLLGAMDHHDPASSL----------PYASSLCGACYEVCPVKINIPEVLVDLRHRITE 422 Query: 257 R 257 Sbjct: 423 A 423 >gi|228996499|ref|ZP_04156138.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides Rock3-17] gi|228763131|gb|EEM12039.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides Rock3-17] Length = 417 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKGVVDGLIEPDEDIENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIMNQNK 83 >gi|229004150|ref|ZP_04161951.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides Rock1-4] gi|228757011|gb|EEM06255.1| Glycolate oxidase, iron-sulfur subunit [Bacillus mycoides Rock1-4] Length = 417 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKGVVDGLIEPDEDIENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIMNQNK 83 >gi|104780001|ref|YP_606499.1| D-lactate deshydrogenase [Pseudomonas entomophila L48] gi|95108988|emb|CAK13684.1| putative D-lactate deshydrogenase [Pseudomonas entomophila L48] Length = 936 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L L Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKKRAGADTRELLRTYQYQGLDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ + Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRGQAAEHG 625 >gi|227497082|ref|ZP_03927331.1| iron-sulfur cluster-binding protein [Actinomyces urogenitalis DSM 15434] gi|226833430|gb|EEH65813.1| iron-sulfur cluster-binding protein [Actinomyces urogenitalis DSM 15434] Length = 531 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%), Gaps = 11/93 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL----Y 225 C+ C C CP Y G + + L D + Y Sbjct: 342 CIRCGSCMNICPVYQHTGGHAYGSVYPGPIGAII-------TPQLTQGLADDDPVHTLPY 394 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP ++ + ++ +D K Sbjct: 395 ASSLCGACADVCPVKIDIPTILIHLRARSVDVK 427 >gi|228990398|ref|ZP_04150363.1| Glycolate oxidase, iron-sulfur subunit [Bacillus pseudomycoides DSM 12442] gi|228768924|gb|EEM17522.1| Glycolate oxidase, iron-sulfur subunit [Bacillus pseudomycoides DSM 12442] Length = 417 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKGVVDGLIEPDEDIENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIMNQNK 83 >gi|308271984|emb|CBX28592.1| hypothetical protein N47_G39160 [uncultured Desulfobacterium sp.] Length = 245 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 13/94 (13%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + L C+ C CS+ CP+ + P L+ + +D + Sbjct: 23 EELLPEGGNLNLCLTCGACSSGCPATGLDGMD---PRKFLRMAAFGLD----------EE 69 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + C C CP ++ + I + Sbjct: 70 IAKSDWPWMCTMCQRCIYVCPMKIDIPQLIYNAR 103 >gi|114705752|ref|ZP_01438655.1| Iron-sulfur cluster binding protein [Fulvimarina pelagi HTCC2506] gi|114538598|gb|EAU41719.1| Iron-sulfur cluster binding protein [Fulvimarina pelagi HTCC2506] Length = 483 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSYWW-----NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C+ C C CP Y Y GP + + G+ L N Sbjct: 308 FEDMLRCIRCGACMNHCPVYHAVGGHAYGWVYPGPMGAVLTPALI----GVEDGKLLPNA 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP + K + + ++ + Sbjct: 364 S--------TFCGRCEEVCPMHIPLPKMMRHWREQEYEKHL 396 >gi|94267113|ref|ZP_01290748.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93452162|gb|EAT02829.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 173 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L+ C C CS +CP D P L+ R + ERL L+ Sbjct: 11 HLHRCYSCGACSGACPVSQAIPD--FDPRRLIHMVRMGL-------KERLFA---SELLW 58 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + C CP+ + A+ + ++ + ++ + Sbjct: 59 YCSSCRGCVFVCPQDVRFAEIVDALRQLAYEQGM 92 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 9/98 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + E + L+ C C C CP + + A ++ A R L + Sbjct: 41 HMVRMGLKERLFASELLWYCSSCRGCVFVCP-------QDVRFAEIVDALRQLAYEQGMI 93 Query: 211 QGERLDNLEDPFRLYR--CHTIMNCTQSCPKGLNPAKA 246 E+L + R C + + C + CP + A Sbjct: 94 SDEQLVEKGKAVAVDRDLCVSCLTCVRVCPWRIPVIDA 131 Score = 35.5 bits (80), Expect = 7.3, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPK-----GLNPAKAIAKIKMMLLDR 257 R L L+RC++ C+ +CP +P + I ++M L +R Sbjct: 1 RRGTALPGGEHLHRCYSCGACSGACPVSQAIPDFDPRRLIHMVRMGLKER 50 >gi|167572183|ref|ZP_02365057.1| iron-sulfur binding protein [Burkholderia oklahomensis C6786] Length = 481 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 308 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 365 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP + + K++ M D ++ Sbjct: 366 A--------CTLNGRCAAVCPVKIPLPTLLKKLRGMQFDARL 399 >gi|91774346|ref|YP_567038.1| CoB-CoM heterodisulfide reductase, subunit D [Methanococcoides burtonii DSM 6242] gi|91713361|gb|ABE53288.1| CoB-CoM heterodisulfide reductase, subunit D [Methanococcoides burtonii DSM 6242] Length = 415 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 19/112 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWW--------------NSDRYLGPAILLQAYRWLIDS 206 ++ + CV C C CP+Y +++ + L+A + + Sbjct: 14 AVQLMEIDACVRCGECVKWCPTYDASNKDPGLAPRDKILRWGQFMNKSYGLRARLFGPKA 73 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E D + +Y+C T C C G+N + ++ L+ R Sbjct: 74 IPEE-----DIAQFKDDVYKCTTCGMCATVCEVGINTIELWESMRANLVKRG 120 >gi|189500763|ref|YP_001960233.1| heterodisulfide reductase, putative [Chlorobium phaeobacteroides BS1] gi|189496204|gb|ACE04752.1| heterodisulfide reductase, putative [Chlorobium phaeobacteroides BS1] Length = 391 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + +C CA CS CP + D P + +W + D L ++ Sbjct: 25 MKKCYQCATCSVVCP---LSPDDKPFPRKEMVMAQWGL----------KDELVKSADIWL 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CH +C++ CP+G P ++ ++ ++ Sbjct: 72 CHNCNDCSKYCPRGAKPGDVLSILRKSVIQE 102 >gi|308175956|ref|YP_003915362.1| FAD linked oxidase domain-containing protein [Arthrobacter arilaitensis Re117] gi|307743419|emb|CBT74391.1| FAD linked oxidase domain-containing protein [Arthrobacter arilaitensis Re117] Length = 943 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 7/120 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + + A + + CV C C CPS D L P Sbjct: 514 RLMMNPGVIIDEDHAAHIRNIKLNETIEVEADHCVECGYCEPVCPS----KDLTLTPRQR 569 Query: 197 LQAYRWLIDSRDEFQGERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + + E + LE + + C C +CP G+N + +++ Sbjct: 570 IVVRRAIAKAEAEGNTALVAELERDYEYNGVQTCAVDGMCVTACPVGINTGLLVKRLRRE 629 >gi|303247137|ref|ZP_07333412.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] gi|302491563|gb|EFL51448.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] Length = 455 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 10/90 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C CP+ LG + + R L+ +D + C Sbjct: 41 CMTCGACVNGCPATGTPG---LGDLDVRKILRMLVLGL-------VDEAAATNFPWLCTG 90 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C+ CP GL+ +A++K M ++ Sbjct: 91 CGRCSLVCPMGLDIVPVMAELKHMRPREQV 120 >gi|297379866|gb|ADI34753.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori v225d] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|255324497|ref|ZP_05365614.1| iron-sulfur cluster binding protein [Corynebacterium tuberculostearicum SK141] gi|255298403|gb|EET77703.1| iron-sulfur cluster binding protein [Corynebacterium tuberculostearicum SK141] Length = 501 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 45/178 (25%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWSGVTEGDGP 301 Query: 152 KELLQSHEDR--------QKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D +C+ C+ C CP Y Y GP + Sbjct: 302 QNFHLVLLDNGRTAALSSPIGHQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI-- 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 S D+ + L Y C C + CP + + I + + + Sbjct: 360 -------SLTPQLTGMKDHNDPSASLPYACSLCGRCDEVCPVKIPLSDVILENRHQKV 410 >gi|311740635|ref|ZP_07714462.1| iron-sulfur cluster-binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304155|gb|EFQ80231.1| iron-sulfur cluster-binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 501 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 45/178 (25%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWSGVTEGDGP 301 Query: 152 KELLQSHEDR--------QKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D +C+ C+ C CP Y Y GP + Sbjct: 302 QNFHLVLLDNGRTAALSSPIGHQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI-- 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 S D+ + L Y C C + CP + + I + + + Sbjct: 360 -------SLTPQLTGMKDHNDPSASLPYACSLCGRCDEVCPVKIPLSDVILENRHQKV 410 >gi|308183934|ref|YP_003928067.1| iron-sulfur cluster binding protein [Helicobacter pylori SJM180] gi|308059854|gb|ADO01750.1| iron-sulfur cluster binding protein [Helicobacter pylori SJM180] Length = 481 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 19/94 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C CP Y Y GP ++ + + L L Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQ-------------LFGL 354 Query: 219 EDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIK 251 + + C CT+ CP + A+ I ++ Sbjct: 355 NNYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLR 388 >gi|283853031|ref|ZP_06370288.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283571568|gb|EFC19571.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 323 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP + D + + + Sbjct: 201 AFWRYHMDRCIRCYACRNACPMCVCRDHCIAQSREPHWLTQ-----EDTVTEKLMFQVVH 255 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC C ++CP + + + Sbjct: 256 AMHLAGRCTECGECQRACPMDIPVLALKKHLNRAI 290 >gi|254779347|ref|YP_003057452.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori B38] gi|254001258|emb|CAX29235.1| Putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori B38] Length = 433 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 71 CTACVEICPFHLPIDTLIEKAREKIAQK 98 >gi|220905253|ref|YP_002480565.1| hypothetical protein Ddes_1991 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869552|gb|ACL49887.1| protein of unknown function DUF162 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 716 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 13/107 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C+ CP Y Y+ + + +D Sbjct: 299 RTEIAKDPLFKQIFRCVRCGACANVCPVYRLVGGHKMGYIYIGAIGLILTYFFHGKD--- 355 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R L C +C C G+ + I +I+ L + + Sbjct: 356 --RARILSQ-----NCMGCESCANVCAGGIELPRLIREIRARLNEEQ 395 >gi|17546331|ref|NP_519733.1| iron-sulfur binding protein [Ralstonia solanacearum GMI1000] gi|17428628|emb|CAD15314.1| putative uncharacterized conserved protein containing a ferredoxin-like domain [Ralstonia solanacearum GMI1000] Length = 469 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 56/195 (28%), Gaps = 35/195 (17%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHF--YSQHRSIEPWL 143 GS + + N C + + + ++DL M + ++I + Sbjct: 212 GSVALVTNEGNEGMCTVMPRVHVAVTGIE--KVLPTLEDLATVMRLLPRSATGQAISNYF 269 Query: 144 KTVSPKPAKELLQSHEDRQK--------------IDGLYECVMCACCSTSCPSY-----W 184 ++ A E + C+ C C CP Y Sbjct: 270 SLLTGPRAAGEQDGPEHMYFVIVDGGRSGLIGGEFQAMLRCIRCGACMNHCPVYQKIGGH 329 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y GP + ++ S + ++ P C + CP + + Sbjct: 330 AYGWVYPGPMGSVLTPSYVGLS---------NAIDLPQAA---TLCGECNRVCPASIPLS 377 Query: 245 KAIAKIKMMLLDRKI 259 + ++ ++R++ Sbjct: 378 DLLRTLREKQMEREL 392 >gi|116754866|ref|YP_843984.1| putative heterodisulfide reductase, C subunit [Methanosaeta thermophila PT] gi|116666317|gb|ABK15344.1| putative heterodisulfide reductase, C subunit [Methanosaeta thermophila PT] Length = 174 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 13/94 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C+ C CS+SC + + + + R +++ R + E L ++ Sbjct: 17 EIRTCIQCGTCSSSCSTAHLMDN------SIRKLIRLVLEGR---KREALA----SESIW 63 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + + CT CP+G+ P ++ ++ + I Sbjct: 64 LCTSCLLCTVRCPRGIRPKAVVSALRNICEREGI 97 >gi|253698682|ref|YP_003019871.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251773532|gb|ACT16113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 336 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 21/124 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAY--- 200 K L ED CV C C+ CP+ G Sbjct: 209 KIRTWLEGHFEDPLWEKISDICVGCGSCAFICPACHCFDINDEGSTEQGSRRKHWDACGF 268 Query: 201 -RWLID-----SRDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKGLNPAKAI 247 ++ RD + + F+ Y C C ++CP G++ A+ + Sbjct: 269 SKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCVRACPVGIDIAEIL 328 Query: 248 AKIK 251 + I Sbjct: 329 STIN 332 >gi|308061996|gb|ADO03884.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter pylori Cuz20] Length = 429 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 13 CVKCAKCVPGCTIYRIHKDETTSPRGFLDLMRLNAQNKLKLDTNLKHLLET------CFL 66 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 67 CTACVEICPFHLPIDTLIEKAREKIAQK 94 >gi|262173957|ref|ZP_06041634.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus MB-451] gi|261891315|gb|EEY37302.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus MB-451] Length = 409 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|258623956|ref|ZP_05718909.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM603] gi|258583750|gb|EEW08546.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM603] Length = 409 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|169830759|ref|YP_001716741.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637603|gb|ACA59109.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 342 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 29/117 (24%), Gaps = 22/117 (18%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNS------DRYLGPAILLQAYRWLID------ 205 E Y C+ C C+ CP+ G D Sbjct: 224 FESSYWRKLAYRCLGCGICTYLCPTCHCFDIVDEDRGDQTGTRWRCWDSCMFRDFTLHTS 283 Query: 206 ---SRDEFQGER-------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R L D L C C +CP ++ + IA+IK Sbjct: 284 GHNPRGSKMERVRNRFLHKLSYHLDRHGLPGCVGCGRCIAACPVNIDITRVIAEIKE 340 >gi|268679810|ref|YP_003304241.1| hypothetical protein Sdel_1183 [Sulfurospirillum deleyianum DSM 6946] gi|268617841|gb|ACZ12206.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM 6946] Length = 225 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 75/238 (31%), Gaps = 43/238 (18%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E ++R++ P +++ +D + + + + Sbjct: 6 ELSVFRFDAKTDFLPYYKKHFITIDTTKTVY----ELLAQIQNEEVNFDYPKGS----LS 57 Query: 89 GMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 + I+G + + ++ + PL V KDL+++ FY + ++ ++ Sbjct: 58 ALKINGKALFSDALLKGVIERFGKSLTLEPLSSKRVTKDLIINTDDFYQKFDLLDAYVDG 117 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + + P + D Y G A+ AY ++ Sbjct: 118 KERALFERYIIY-------------------HYASPVLDFVED-YQGDALFAFAYD-MLQ 156 Query: 206 SRDEFQGERLDNLEDPF-RLY----RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + L+ + + L+ C I C+ + K I +K ++ + Sbjct: 157 KHPEQKHHILNVIANEHIGLFLHVKLCKKIYPCSA------DVEKKIVALKNEVMQHR 208 >gi|220905255|ref|YP_002480567.1| hypothetical protein Ddes_1993 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869554|gb|ACL49889.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 431 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 14/91 (15%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF----R 223 C+ C C CP + + L L + ++DP + Sbjct: 19 TACMKCGMCQAVCPMFGASGMEADVARGKLALIDNLAH----------EMIQDPEAVADK 68 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC +C SCP G+ + + ++ Sbjct: 69 LGRCLLCGSCQASCPPGVQIMDVFMEAREIV 99 >gi|15922627|ref|NP_378296.1| hypothetical protein ST2294 [Sulfolobus tokodaii str. 7] gi|15623417|dbj|BAB67405.1| 325aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 325 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 15/89 (16%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L +CV C C +CP+Y P + A + I S Sbjct: 4 EEELKKCVHCGFCLEACPTYVVTRSEVHSPRGRITAVKLNILS---------------EG 48 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + C C +CP G+ ++ I +++ Sbjct: 49 INTCMYCRRCELACPSGVIYSEIITRVRK 77 >gi|258622624|ref|ZP_05717645.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM573] gi|258585080|gb|EEW09808.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM573] Length = 409 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|89896111|ref|YP_519598.1| hypothetical protein DSY3365 [Desulfitobacterium hafniense Y51] gi|89335559|dbj|BAE85154.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 694 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 70/241 (29%), Gaps = 47/241 (19%) Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAI---AVYP 115 L L + + DP + I M LA K + + Sbjct: 165 FLLQGLRMAGEHDPWAVYGFAGYWMIEPLQAMFSQEQ-LLAMHKFTWWFHMFVAFGFIAY 223 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL----YECV 171 LP+ + + ++ F + + ++E E +Q C+ Sbjct: 224 LPYSKLFHIFLGPINQFLRKREPMGVPELIDFEDESQETFGLSEFKQLSWKAIFNSDVCI 283 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQA--------YRWLIDSRDEFQGE---------- 213 C C +CP+ S ++L P ++Q Y+ + ++ E + Sbjct: 284 RCGRCQENCPA--TVSGKHLNPKQIIQDIKVRAEEEYQAVCQAKKEAKQAGRQAGVMASG 341 Query: 214 -------------------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + ++ C T +C Q CP + +++ L Sbjct: 342 ETATAVEGTAALAIPPGRGLIGEVIQEQDIWDCTTCRSCEQQCPVFVEHVDKTVEMRRNL 401 Query: 255 L 255 + Sbjct: 402 V 402 >gi|227827378|ref|YP_002829157.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.14.25] gi|227830071|ref|YP_002831850.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus L.S.2.15] gi|229578884|ref|YP_002837282.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus Y.G.57.14] gi|229582362|ref|YP_002840761.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus Y.N.15.51] gi|229584593|ref|YP_002843094.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.16.27] gi|238619534|ref|YP_002914359.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.16.4] gi|284997489|ref|YP_003419256.1| Heterodisulfide reductase subunit C [Sulfolobus islandicus L.D.8.5] gi|227456518|gb|ACP35205.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus L.S.2.15] gi|227459173|gb|ACP37859.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.14.25] gi|228009598|gb|ACP45360.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus Y.G.57.14] gi|228013078|gb|ACP48839.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus Y.N.15.51] gi|228019642|gb|ACP55049.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.16.27] gi|238380603|gb|ACR41691.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus M.16.4] gi|284445384|gb|ADB86886.1| Heterodisulfide reductase subunit C [Sulfolobus islandicus L.D.8.5] gi|323474432|gb|ADX85038.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus REY15A] gi|323477169|gb|ADX82407.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus islandicus HVE10/4] Length = 230 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C ++ D P + R +G++ +E L+R Sbjct: 60 ISACWQCGTCTSGCTMREYDPD--YSPRRFIDLAR---------KGDKQALIELQNSLWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I LL + Sbjct: 109 CVSCQKCTHRCPKGVLVEEVVHSIHHYLLKHGL 141 >gi|56477336|ref|YP_158925.1| fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase [Aromatoleum aromaticum EbN1] gi|56313379|emb|CAI08024.1| Fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase [Aromatoleum aromaticum EbN1] Length = 1300 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 73/220 (33%), Gaps = 20/220 (9%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +D + L RS I G G+ I + L + + Sbjct: 717 NIPVNSDHYEMLATANRA---VDRIMALARSLDGVISGEHGIGITKLDYLTDAEMANFWE 773 Query: 109 GAIAVYPLPHMS---VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 V P H + +++ L + + + + S + + Sbjct: 774 YKRRVDPQGHFNRGKLMRGLGTMTGNLDNAYTPSFNLMGHESLIMEQTEIGDIA-----H 828 Query: 166 GLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C+ C C C ++ + ++ L ++L++A + +R Sbjct: 829 DIKDCLRCGKCKPVCSTHVPRANLLYSPRNKILSTSLLIEAMLYEEQTRRGVSLAHWAEF 888 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ED C C + CP ++ K++ +L + Sbjct: 889 EDV--ADHCTVCHKCEKPCPVDIDFGDVSIKMRNLLRKQG 926 >gi|328953888|ref|YP_004371222.1| Lactate utilization protein B/C [Desulfobacca acetoxidans DSM 11109] gi|328454212|gb|AEB10041.1| Lactate utilization protein B/C [Desulfobacca acetoxidans DSM 11109] Length = 455 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 31/124 (25%), Gaps = 16/124 (12%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F + + + C+ C C CP + Sbjct: 270 NFIRGMKPQPGGRQAFYLILLDNGRRRLAADPLYREALFCLRCGACLNVCPIFQLGGGHL 329 Query: 191 LG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 G P + + S + C C+Q CP G+ A+ I Sbjct: 330 YGQVYPGAIGILLAPFLGSGVDLTD-------------LCTQCGACSQICPVGIPLAEQI 376 Query: 248 AKIK 251 + + Sbjct: 377 CRRR 380 >gi|317012484|gb|ADU83092.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori Lithuania75] Length = 433 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L R ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP L I K + + + Sbjct: 71 CTACVEICPFHLPIDTLIEKAREKIAQK 98 >gi|262164896|ref|ZP_06032634.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM223] gi|262027276|gb|EEY45943.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio mimicus VM223] Length = 409 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|51244871|ref|YP_064755.1| hypothetical protein DP1019 [Desulfotalea psychrophila LSv54] gi|50875908|emb|CAG35748.1| conserved hypothetical iron-sulfur protein [Desulfotalea psychrophila LSv54] Length = 716 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 13/107 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 + + + CV C C+ CP Y +G + + ++ + Sbjct: 297 RSAMAKDPQFSQVLACVRCGACANVCPVYRMVGGHKMGHIYIGAIGLILTYFFHGEEKAK 356 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + C G++ I +I + + D+ Sbjct: 357 NL----------VQNCINCGACKEVCAAGIDLPALIKEIHIRIQDKA 393 >gi|153824382|ref|ZP_01977049.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae MZO-2] gi|254226182|ref|ZP_04919777.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae V51] gi|261212501|ref|ZP_05926786.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio sp. RC341] gi|125621284|gb|EAZ49623.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae V51] gi|149741936|gb|EDM55965.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae MZO-2] gi|260838432|gb|EEX65088.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio sp. RC341] Length = 413 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|15601504|ref|NP_233135.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae O1 biovar eltor str. N16961] gi|121585603|ref|ZP_01675399.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae 2740-80] gi|153215614|ref|ZP_01950059.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae 1587] gi|153820691|ref|ZP_01973358.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae B33] gi|229510050|ref|ZP_04399530.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae B33] gi|229514198|ref|ZP_04403659.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae TMA 21] gi|229516389|ref|ZP_04405836.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae RC9] gi|229605624|ref|YP_002876328.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae MJ-1236] gi|254285772|ref|ZP_04960735.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae AM-19226] gi|255746489|ref|ZP_05420436.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholera CIRS 101] gi|262152384|ref|ZP_06028517.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae INDRE 91/1] gi|9658170|gb|AAF96647.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550220|gb|EAX60234.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae 2740-80] gi|124114702|gb|EAY33522.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae 1587] gi|126521734|gb|EAZ78957.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae B33] gi|150424269|gb|EDN16207.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae AM-19226] gi|229346270|gb|EEO11241.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae RC9] gi|229348178|gb|EEO13136.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae TMA 21] gi|229352495|gb|EEO17435.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae B33] gi|229372110|gb|ACQ62532.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae MJ-1236] gi|255736243|gb|EET91641.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholera CIRS 101] gi|262030835|gb|EEY49466.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae INDRE 91/1] Length = 413 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|257063236|ref|YP_003142908.1| predicted oxidoreductase of aldo/keto reductase family [Slackia heliotrinireducens DSM 20476] gi|256790889|gb|ACV21559.1| predicted oxidoreductase of aldo/keto reductase family [Slackia heliotrinireducens DSM 20476] Length = 364 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 7/92 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L C C C+ +CP+ + ++ Y + R + + Sbjct: 278 ASHNPKLAPCTGCRYCTDNCPAQ-------IDIPAMMDLYNEALPMRPAQRSRHVRAALG 330 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 P C CT+ CP+G++ + I Sbjct: 331 PNTAEDCIGCGACTEHCPQGIDIPGIMEGINN 362 >gi|145341535|ref|XP_001415862.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576085|gb|ABO94154.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 983 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 70/227 (30%), Gaps = 23/227 (10%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKI----DPTLTLRRSCREGICGSCGMNIDGTNTLA 99 + + D +C L+G L++ D + + + + +C + G+ Sbjct: 442 MFEKFGYDDASCMGHALEGNLHLVFSQGFRTDEEVKMYSAMMQEMCEIVAVKYQGSLKAE 501 Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + ++ +L Y + ++ P Sbjct: 502 HGTGRNVAPFVEMEWGTKAYDIMWELKELFDPNY-----VLNPGVILNRDPHVHEKNLKP 556 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-------IDSRDEFQG 212 + C+ C C ++CP+ D L P + YR + ++R + Sbjct: 557 KPVADPIVDMCMECGFCESNCPTR----DVSLTPRQRITVYREISRLQAIEPNTRTKEDQ 612 Query: 213 ERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIKMMLLD 256 RLD D F T C CP G+N + + I+ ++ Sbjct: 613 SRLDEFLDIFAYAGNSTCAADGMCEVKCPVGINTGELVKSIRNREME 659 >gi|110677487|ref|YP_680494.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseobacter denitrificans OCh 114] gi|109453603|gb|ABG29808.1| 4Fe-4S binding domain protein, putative [Roseobacter denitrificans OCh 114] Length = 468 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 50/192 (26%), Gaps = 35/192 (18%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVY----PLPHMSVIKDLVVD--MSHFYSQHRSI 139 GS + N K + + L H +V L+ + +Q+ + Sbjct: 213 GSFVTITNEGNAELTTTPPKTHIVTVGIEKMVPSLKHAAVFIRLLSRAAIGTEITQYTTF 272 Query: 140 EPWLKTVSPKPAKELLQS--------HEDRQKIDGLYECVMCACCSTSCPSY-----WWN 186 K + E L + + C+ C C CP Y Sbjct: 273 YNGPKRDGDRDGPENLHIVLVDNHRSDMLSDFLRPMLRCIRCGACMNHCPVYAAVGGHAY 332 Query: 187 SDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y GP + A L S+D C C + CP + Sbjct: 333 GAVYPGPMGSVLTPAMTGLKGSKDLPNA--------------CTLNGRCKEVCPVNIPLP 378 Query: 245 KAIAKIKMMLLD 256 + ++ + Sbjct: 379 DMLRSLRARQFE 390 >gi|15897991|ref|NP_342596.1| heterodisulfide reductase subunit C (hdrC-2) [Sulfolobus solfataricus P2] gi|284173968|ref|ZP_06387937.1| heterodisulfide reductase subunit C (hdrC-2) [Sulfolobus solfataricus 98/2] gi|13814322|gb|AAK41386.1| Heterodisulfide reductase subunit C (hdrC-2) [Sulfolobus solfataricus P2] gi|261602706|gb|ACX92309.1| heterodisulfide reductase subunit C (HdrC-2) [Sulfolobus solfataricus 98/2] Length = 230 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C ++ D P + R +G++ +E L+R Sbjct: 60 ISACWQCGTCTSGCTMREYDPD--YSPRRFIDLAR---------KGDKQALIELQNSLWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I LL + Sbjct: 109 CVSCQKCTHRCPKGVLVEEVVHSIHHYLLKHGL 141 >gi|82523738|emb|CAI78738.1| predicted NADH:ubiquinone oxidoreductase, subunit RfnC [uncultured gamma proteobacterium] Length = 671 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 25/122 (20%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + L + + C+ C C+ +CP + Sbjct: 338 VPDPRVPIVKTTNCLLAPTDAELPLPPPAQACIRCGMCAEACPVSLLPQQLF-------- 389 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK 251 W ++ + E L+ C C+ +CP + + I ++ Sbjct: 390 ---WFAQGKEYEKLE-------GHNLFDCIECGACSYACPSNIPLVQYYRASKAEILHLR 439 Query: 252 MM 253 Sbjct: 440 RE 441 >gi|328886697|emb|CCA59936.1| Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Streptomyces venezuelae ATCC 10712] Length = 478 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 45/180 (25%), Gaps = 24/180 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G V P + V + S + W T Sbjct: 236 NGRMCLTLPETLISVVGVEKVVPGWRDLEVFLQTLPRSSTAERMNPYTSMWTGTRDDDGP 295 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 D + L C+ C+ C CP Y Y GP + Sbjct: 296 SAFHLVLLDNGRTGALADEVGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 354 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R D Y C + CP ++ + + ++ + Sbjct: 355 ---LTPQLRGTASE------VDASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVASEG 405 >gi|256822166|ref|YP_003146129.1| RnfABCDGE type electron transport complex subunit C [Kangiella koreensis DSM 16069] gi|256795705|gb|ACV26361.1| electron transport complex, RnfABCDGE type, C subunit [Kangiella koreensis DSM 16069] Length = 539 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 18/112 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 ++ + ++ + C+ C C CP+ Y W S Sbjct: 354 KSTNCIIMAAPKELKHDHLALPCIRCGACMDVCPASLLPQQLY-----------WHAKSD 402 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + E + L+ C C CP + + K + ++K+ Sbjct: 403 EFEKAE-------EYDLFDCIECGACAYVCPSDIPLVQYYRYAKSTIRNQKV 447 >gi|291279776|ref|YP_003496611.1| oxidoreductase [Deferribacter desulfuricans SSM1] gi|290754478|dbj|BAI80855.1| oxidoreductase [Deferribacter desulfuricans SSM1] Length = 943 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 10/138 (7%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS------ 179 ++ S Y + + S ++LL E I + +C C+ C+T Sbjct: 505 IITHSDPYQMKKFLRFGKDYRSKDLTEKLLVWDE--GFIPEVEKCHGCSKCTTVTTATRM 562 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP Y + D P R LI + + + F + C +C + CP Sbjct: 563 CPIYKFTRDEAAAPKAKANILRALISGVIDDKALYDKAFQ--FVIDHCVNCGSCERECPS 620 Query: 240 GLNPAKAIAKIKMMLLDR 257 +N K + + + + Sbjct: 621 NVNIPKLALEARSQYVKK 638 >gi|262403790|ref|ZP_06080348.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio sp. RC586] gi|262350294|gb|EEY99429.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio sp. RC586] Length = 409 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|229526727|ref|ZP_04416131.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae bv. albensis VL426] gi|229336885|gb|EEO01903.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae bv. albensis VL426] Length = 413 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|5669041|gb|AAD46142.1|AF081023_1 succinate dehydrogenase [Solanum lycopersicum] Length = 52 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 34/50 (68%), Positives = 41/50 (82%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 DR K+DG+YEC++CACCSTSCPSYWWN + YLGP A RW++DSRDE Sbjct: 3 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPLHSCHANRWIMDSRDE 52 >gi|124027822|ref|YP_001013142.1| hypothetical protein Hbut_0949 [Hyperthermus butylicus DSM 5456] gi|123978516|gb|ABM80797.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 405 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Query: 169 ECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP + W Y GP + W + + L L Sbjct: 320 KCIRCGRCQWECPVWQQTANVWGGPAYGGPMGIG----WTAITLGVKEAAELSML----- 370 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C + C + CP + + I +K Sbjct: 371 ---CLSCGRCDEVCPVRVPLSSIIRWLKRQYA 399 >gi|332827969|gb|EGK00691.1| hypothetical protein HMPREF9455_02965 [Dysgonomonas gadei ATCC BAA-286] Length = 464 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 14/89 (15%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C +CP Y + Y P + L + + Sbjct: 302 KCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKSPEEYA-----------DNVS 350 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C +C CP ++ A I + + L Sbjct: 351 ACSLCYSCNNVCPVKIDLADQIYRWRQNL 379 >gi|153800757|ref|ZP_01955343.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae MZO-3] gi|124123732|gb|EAY42475.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae MZO-3] Length = 413 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|144901336|emb|CAM78200.1| iron-sulphur protein [Magnetospirillum gryphiswaldense MSR-1] Length = 473 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y G + L Q LD D Sbjct: 308 RCIRCGACMNHCPVYARVGGHTYGSVYPGPIGKIL-----TPQLAGLDCAGDLPHAS--T 360 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + A + +++ Sbjct: 361 LCNACVEVCPVQIPIADILVQLRTEAAQ 388 >gi|145642294|ref|ZP_01797858.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae R3021] gi|145273005|gb|EDK12887.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 22.4-21] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|145633738|ref|ZP_01789463.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 3655] gi|145635538|ref|ZP_01791237.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittAA] gi|229845518|ref|ZP_04465646.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 6P18H1] gi|144985397|gb|EDJ92224.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 3655] gi|145267201|gb|EDK07206.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittAA] gi|229811534|gb|EEP47235.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 6P18H1] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|251790351|ref|YP_003005072.1| iron-sulfur cluster binding protein [Dickeya zeae Ech1591] gi|247538972|gb|ACT07593.1| iron-sulfur cluster binding protein [Dickeya zeae Ech1591] Length = 475 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 9/98 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C +CP+Y G L L ED Sbjct: 305 PFHDILRCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVL--------SPLLGGYEDFK 356 Query: 223 RL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C C CP + + I + + L + + Sbjct: 357 HLPYACSLCTACDDVCPVRIPLSSLIVQHRRTLAENGM 394 >gi|78358285|ref|YP_389734.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220690|gb|ABB40039.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 713 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 13/107 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 ++ D + CV C C+ CP Y +G + + D+ + Sbjct: 297 RRAMADDPLYSQVLRCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGSDKAK 356 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C C C G++ + I I+ L + Sbjct: 357 ----------NLVHNCINCEACKNICAGGIDLPRLIKDIRARLNEEG 393 >gi|89100915|ref|ZP_01173763.1| hypothetical protein B14911_15575 [Bacillus sp. NRRL B-14911] gi|89084361|gb|EAR63514.1| hypothetical protein B14911_15575 [Bacillus sp. NRRL B-14911] Length = 475 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ CA C CP Y G P + L+ DEF+ Y Sbjct: 312 HCIRCAACINVCPVYRHVGGHSYGSIYPGPVGAVLSPLLGGYDEFKEL----------PY 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + + + ++++ Sbjct: 362 ASTLCAACTEACPVKIPLHEHLLRHRQEIVEK 393 >gi|333029711|ref|ZP_08457772.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Bacteroides coprosuis DSM 18011] gi|332740308|gb|EGJ70790.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Bacteroides coprosuis DSM 18011] Length = 406 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 12/105 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ E + +C+ C C+ CP N + Y GP + + + R Sbjct: 1 MKLQEYNISNNNFEQCIKCTICTVYCPVAKVNPN-YPGPK----------QAGPDGERLR 49 Query: 215 LDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + L C C +CP + I ++ +K Sbjct: 50 LKKADFYDEALKYCLNCKRCEVACPSNVKIGDIIQSARIKYSKKK 94 >gi|319775466|ref|YP_004137954.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus influenzae F3047] gi|329122501|ref|ZP_08251086.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus aegyptius ATCC 11116] gi|317450057|emb|CBY86271.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus influenzae F3047] gi|327473191|gb|EGF18613.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus aegyptius ATCC 11116] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|306835294|ref|ZP_07468323.1| oxidoreductase [Corynebacterium accolens ATCC 49726] gi|304568838|gb|EFM44374.1| oxidoreductase [Corynebacterium accolens ATCC 49726] Length = 827 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 19/145 (13%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + ++ +L D + + CV C C C Sbjct: 500 DELYEVMQLLKRACDPAGTMNPGVILDDDPDAHITNIKLNPTVEEEIDPCVECGYCEPVC 559 Query: 181 PSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PS D L P + +A + +S D LD + + C C +C Sbjct: 560 PSR----DLTLTPRQRIVVRRARQRAQESGDTHLVAELDEAYEYMGIDTCAVDSMCLTAC 615 Query: 238 PKGLNPAKAIAKIKMM---LLDRKI 259 P G++ K I K++ + K+ Sbjct: 616 PVGIDTGKFIKKLRHENAGAAEEKV 640 >gi|301169400|emb|CBW29000.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus influenzae 10810] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|291614940|ref|YP_003525097.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] gi|291585052|gb|ADE12710.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] Length = 447 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 19/87 (21%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +Y C+ C C CP ++L P+ L + + + + L Sbjct: 368 PKVYSCIKCGECLKVCP-------KFLNPSQLGLL----------AAKREYEEMAERYNL 410 Query: 225 YRCHTIMNCTQSCPKGLNPAKA--IAK 249 RC C+ CP + + IAK Sbjct: 411 DRCFECGCCSYVCPSHIPLVQQFRIAK 437 >gi|227502719|ref|ZP_03932768.1| FAD linked oxidase domain protein [Corynebacterium accolens ATCC 49725] gi|227076449|gb|EEI14412.1| FAD linked oxidase domain protein [Corynebacterium accolens ATCC 49725] Length = 944 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 19/145 (13%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + ++ +L D + + CV C C C Sbjct: 500 DELYEVMQLLKRACDPAGTMNPGVILDDDPDAHITNIKLNPTVEEEIDPCVECGYCEPVC 559 Query: 181 PSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PS D L P + +A + +S D LD + + C C +C Sbjct: 560 PSR----DLTLTPRQRIVVRRARQRAQESGDTHLVAELDEAYEYMGIDTCAVDSMCLTAC 615 Query: 238 PKGLNPAKAIAKIKMM---LLDRKI 259 P G++ K I K++ + K+ Sbjct: 616 PVGIDTGKFIKKLRHENAGAAEEKV 640 >gi|237653653|ref|YP_002889967.1| electron transport complex, RnfABCDGE type, C subunit [Thauera sp. MZ1T] gi|237624900|gb|ACR01590.1| electron transport complex, RnfABCDGE type, C subunit [Thauera sp. MZ1T] Length = 481 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C CP L A ++A R D+ + C + Sbjct: 368 CLHCGRCVDVCPVGLVP----LELAARVRAGRI-----DDAA---------ELGMGDCLS 409 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP L A K + R+ Sbjct: 410 CGCCAYVCPAHLPLAHLFNYAKGEIAARR 438 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP GL P + A+++ Sbjct: 367 ACLHCGRCVDVCPVGLVPLELAARVR 392 >gi|145629623|ref|ZP_01785420.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 22.1-21] gi|144978134|gb|EDJ87907.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 22.1-21] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|170719880|ref|YP_001747568.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida W619] gi|169757883|gb|ACA71199.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida W619] Length = 936 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKKRAGIDTRALLQTYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ + Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAAEHA 625 >gi|117619508|ref|YP_856976.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560915|gb|ABK37863.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 400 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 30/97 (30%), Gaps = 18/97 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---- 217 +C+ C C+ CP N Y GP GERL Sbjct: 5 HANQTFDQCIKCTVCTAYCPVAKANP-AYPGPKQA------------GPDGERLRIKSPE 51 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L D L C C +CP G+ IAK K Sbjct: 52 LFDS-ALKYCTNCKRCEVACPSGVRIGDIIAKAKHQY 87 >gi|16272625|ref|NP_438843.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae Rd KW20] gi|260581493|ref|ZP_05849303.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haemophilus influenzae RdAW] gi|319897872|ref|YP_004136069.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus influenzae F3031] gi|1169947|sp|P43801|GLPC_HAEIN RecName: Full=Anaerobic glycerol-3-phosphate dehydrogenase subunit C; Short=G-3-P dehydrogenase gi|1573685|gb|AAC22343.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Haemophilus influenzae Rd KW20] gi|260091853|gb|EEW75806.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haemophilus influenzae RdAW] gi|317433378|emb|CBY81758.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit [Haemophilus influenzae F3031] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|120599634|ref|YP_964208.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146292372|ref|YP_001182796.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120559727|gb|ABM25654.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145564062|gb|ABP74997.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 464 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A L+D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKLDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + + Sbjct: 358 WACTLCGSCTFICPTKVPLDKIIHHHRRLKAEAR 391 >gi|145639442|ref|ZP_01795047.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittII] gi|145271489|gb|EDK11401.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittII] gi|309751717|gb|ADO81701.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae R2866] Length = 426 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|317485923|ref|ZP_07944782.1| oxidoreductase FAD-binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922845|gb|EFV44072.1| oxidoreductase FAD-binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 671 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 21/118 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYW--WNSDRYLGPAILLQAYRW------------ 202 +D + C+ C C+ CP+ + P + W Sbjct: 256 HFKDEEWDAIASSCIACTGCTRVCPTCTCFTTEEEQDTPHSGTRVRVWDSCQSVSFTRNA 315 Query: 203 -LIDSRDEFQGER------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + R L +E+ F + C C CP ++ +A++K Sbjct: 316 EFHNPRSKTSAVRYRIYDKLQYIEERFGMKGCTGCGRCAAVCPASIDMVDIMARMKEQ 373 >gi|229528377|ref|ZP_04417768.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae 12129(1)] gi|229334739|gb|EEO00225.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae 12129(1)] gi|327485756|gb|AEA80162.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae LMA3894-4] Length = 413 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|198283562|ref|YP_002219883.1| FAD linked oxidase domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667258|ref|YP_002426188.1| oxidoreductase, FAD-binding, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248083|gb|ACH83676.1| FAD linked oxidase domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519471|gb|ACK80057.1| oxidoreductase, FAD-binding, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1277 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L +L++A+ + +R + L D Sbjct: 811 DCLRCGKCKPVCMTHIPRANLLYSPRNKILATGLLIEAFLYEEQTRRGVSQQHFAALNDV 870 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C CP ++ K +++ +L R Sbjct: 871 --ADHCTTCHKCETPCPVDIDFGKVSIQMRNILRARG 905 >gi|197116427|ref|YP_002136854.1| heterodisulfide reductase iron-sulfur cluster-binding subunit [Geobacter bemidjiensis Bem] gi|197085787|gb|ACH37058.1| heterodisulfide reductase, iron-sulfur cluster-binding subunit, putative [Geobacter bemidjiensis Bem] Length = 336 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 21/124 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAY--- 200 K K L ED CV C C+ CP+ G Sbjct: 209 KIKKWLEGHFEDPLWEKISDICVGCGSCAFICPACHCFDINDEGSTEQGSRRKHWDACGF 268 Query: 201 -RWLID-----SRDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKGLNPAKAI 247 ++ RD + + F+ Y C C ++CP G++ A+ + Sbjct: 269 SKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCVRACPVGIDIAEIL 328 Query: 248 AKIK 251 + I Sbjct: 329 STIN 332 >gi|134291658|ref|YP_001115427.1| hypothetical protein Bcep1808_6272 [Burkholderia vietnamiensis G4] gi|206560845|ref|YP_002231610.1| putative iron-sulphur cluster binding electron transport protein [Burkholderia cenocepacia J2315] gi|134134847|gb|ABO59172.1| protein of unknown function DUF162 [Burkholderia vietnamiensis G4] gi|198036887|emb|CAR52790.1| putative iron-sulphur cluster binding electron transport protein [Burkholderia cenocepacia J2315] Length = 457 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +C+ C C +CP Y +S G + + D + L Sbjct: 294 AMDDFWYSLKCIRCGACMNTCPVYRRSSGLSYGGVYSGPIGAIINPTYDFKKYSSLPFAS 353 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +CT CP +N + I K + ++ +R Sbjct: 354 TMNG--------SCTNVCPVKINIHEQIYKWRQIIAER 383 >gi|298530270|ref|ZP_07017672.1| FAD linked oxidase domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509644|gb|EFI33548.1| FAD linked oxidase domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1181 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 9/98 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPA-------ILLQAYRWLIDSRDEFQGERLDNLEDP 221 C C C +CP + + P L++A + + + + L L Sbjct: 727 NCSHCGKCKQACPMFIPQKGKLYHPRNKNISLAGLIEALYYSMLVHGDPDPDVLRELRTI 786 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CT+ CP + K + + L DRK+ Sbjct: 787 --VEHCTACGRCTKICPVKIKGGKVSLEARNYLKDRKV 822 Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 13/41 (31%) Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + D R E + + C C Q+CP + Sbjct: 703 LIEDLRRAGLDESDLLINLLKSIQNCSHCGKCKQACPMFIP 743 >gi|68249262|ref|YP_248374.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 86-028NP] gi|68057461|gb|AAX87714.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 86-028NP] Length = 426 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|89897263|ref|YP_520750.1| hypothetical protein DSY4517 [Desulfitobacterium hafniense Y51] gi|89336711|dbj|BAE86306.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 446 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 12/108 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LIDSRD 208 R L C C C+ C SY D Y P R + S D Sbjct: 42 KRSLRLYLDVCTHCGACAEQCHSYLGTRDPYNMPVARADLVRRVYKKVFAPGRSIFRSWD 101 Query: 209 EFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + +E ++ Y+C+ C CPKG++ A+ I+ +L Sbjct: 102 GAKDIDQETIELWYKYFYQCNQCRRCAVFCPKGIDTAELTIAIRELLA 149 >gi|332981473|ref|YP_004462914.1| hypothetical protein Mahau_0894 [Mahella australiensis 50-1 BON] gi|332699151|gb|AEE96092.1| hypothetical protein Mahau_0894 [Mahella australiensis 50-1 BON] Length = 148 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 12/93 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C C C+ CP + P +++ + D + ++ Sbjct: 21 NLNLCYACGACTAVCPVSRIAEE--FNPRKIIRMVLLGL----------KDEVLSGHEIW 68 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ C CP+ + + I ++ + + Sbjct: 69 LCYQCHACMTRCPQDVRFTEIIKALRRLAVAEG 101 >gi|319425672|gb|ADV53746.1| L-lactate dehydrogenase, iron-sulfur cluster-binding protein, LldF [Shewanella putrefaciens 200] Length = 464 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A L+D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKLDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + + Sbjct: 358 WACTLCGSCTFICPTKVPLDKIIHHHRRLKAEAR 391 >gi|121725830|ref|ZP_01679130.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae V52] gi|147671957|ref|YP_001215527.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae O395] gi|153818634|ref|ZP_01971301.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae NCTC 8457] gi|229506093|ref|ZP_04395602.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae BX 330286] gi|262168592|ref|ZP_06036288.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae RC27] gi|121631595|gb|EAX63963.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae V52] gi|126510787|gb|EAZ73381.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae NCTC 8457] gi|146314340|gb|ABQ18880.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae O395] gi|227015189|gb|ACP11398.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae O395] gi|229356444|gb|EEO21362.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae BX 330286] gi|262023121|gb|EEY41826.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae RC27] Length = 413 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|327401569|ref|YP_004342408.1| hypothetical protein Arcve_1694 [Archaeoglobus veneficus SNP6] gi|327317077|gb|AEA47693.1| protein of unknown function DUF224 cysteine-rich region domain protein [Archaeoglobus veneficus SNP6] Length = 458 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 19/109 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL----------------QAYRWLID 205 + L CV C C+ +CP Y + + + + + +R L+ Sbjct: 45 PYVLTLDLCVKCGTCAEACPVYTASGRKEIYHPVYRSEMLRRVYKRYFTLTGKIFRGLVG 104 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++D E L+ + ++RC C CP ++ +I+ ML Sbjct: 105 AKD-LTEEDLNAM--AEAVWRCTICRRCAYVCPLAIDNGVITREIRKML 150 >gi|227812317|ref|YP_002812327.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae M66-2] gi|298499546|ref|ZP_07009352.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Vibrio cholerae MAK 757] gi|227011459|gb|ACP07670.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae M66-2] gi|297541527|gb|EFH77578.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Vibrio cholerae MAK 757] Length = 413 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|148826680|ref|YP_001291433.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittEE] gi|229847219|ref|ZP_04467323.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 7P49H1] gi|148716840|gb|ABQ99050.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittEE] gi|229809895|gb|EEP45617.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae 7P49H1] gi|309973826|gb|ADO97027.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae R2846] Length = 426 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|253584343|ref|ZP_04861541.1| 4Fe-4S ferredoxin, iron-sulfur binding [Fusobacterium varium ATCC 27725] gi|251834915|gb|EES63478.1| 4Fe-4S ferredoxin, iron-sulfur binding [Fusobacterium varium ATCC 27725] Length = 342 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 21/141 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLG 192 + S+ ++ + D +C+ C C+ CP+ + Y G Sbjct: 202 EKMESLPLKELDPKKITKEQQEIFDMEDFWGDISKKCLACGSCTFVCPTCHCYDVKDYDG 261 Query: 193 PAILLQAYRW----------LIDSRDEF------QGERLDNL----EDPFRLYRCHTIMN 232 + W + + + L ++ +Y C Sbjct: 262 GNAGERYRCWDSCMISDFTRMAHGNPRTSQLQRVRQRFMHKLVYYPKNHEGMYSCVGCGR 321 Query: 233 CTQSCPKGLNPAKAIAKIKMM 253 C + CP GLN + I ++ Sbjct: 322 CVEKCPVGLNIVRVIKRLGEE 342 >gi|229522312|ref|ZP_04411728.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae TM 11079-80] gi|229340297|gb|EEO05303.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio cholerae TM 11079-80] Length = 413 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|109946931|ref|YP_664159.1| putative iron-sulfur electron transport protein [Helicobacter acinonychis str. Sheeba] gi|109714152|emb|CAJ99160.1| putative iron-sulfur electron transport protein [Helicobacter acinonychis str. Sheeba] Length = 481 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 23/103 (22%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL---QAYRWLIDSRDEFQGERL 215 C+ C C CP Y Y GP ++ Q + + Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGH-------I 360 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 NL C C++ CP + A+ I ++ + Sbjct: 361 PNL--------CSLCGRCSEVCPVEIPLAELIRDLRSDKVGEG 395 >gi|312197726|ref|YP_004017787.1| iron-sulfur cluster binding protein [Frankia sp. EuI1c] gi|311229062|gb|ADP81917.1| iron-sulfur cluster binding protein [Frankia sp. EuI1c] Length = 489 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 42/172 (24%), Gaps = 6/172 (3%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W + Sbjct: 239 NGRMCLTVPRTLITVMGLEKVVPTWRDLEVFLQLLPRSSTGERMNPYTSMWTGATEGQTF 298 Query: 152 K-----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + C+ C+ C CP Y G L Sbjct: 299 HLVLLDNGRTATLADPRGRAALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAVLSPQ 358 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 G+ + Y C +CP ++ + ++ +D K Sbjct: 359 LTGLGGDGASGGINASLPYASTLCGACLDACPVAIDIPSMLVHLRSRAVDAK 410 >gi|257469751|ref|ZP_05633843.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063983|ref|ZP_07928468.1| 4Fe-4S ferredoxin [Fusobacterium ulcerans ATCC 49185] gi|313689659|gb|EFS26494.1| 4Fe-4S ferredoxin [Fusobacterium ulcerans ATCC 49185] Length = 342 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 21/141 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLG 192 + S+ ++ + D +C+ C C+ CP+ + Y G Sbjct: 202 EKMESLPLKDLDPKKITKEQQELFDMEDFWGDISKKCLACGSCTFVCPTCHCYDVKDYDG 261 Query: 193 PAILLQAYRW----------LIDSRDEF------QGERLDNL----EDPFRLYRCHTIMN 232 + W + + + L ++ +Y C Sbjct: 262 GNAGERYRCWDSCMISDFTRMAHGNPRTSQLQRVRQRFMHKLVYYPKNHEGMYSCVGCGR 321 Query: 233 CTQSCPKGLNPAKAIAKIKMM 253 C + CP GLN + I ++ Sbjct: 322 CVEKCPVGLNIVRVIKRLGEE 342 >gi|167722381|ref|ZP_02405617.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei DM98] Length = 473 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 13/102 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + C+ C C CP Y ++ P + L+ + L N Sbjct: 304 AGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLLQGIEHDTD--LPN 361 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C Q CP + + K++ M D ++ Sbjct: 362 A--------CTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARL 395 >gi|146283656|ref|YP_001173809.1| iron-sulphur protein [Pseudomonas stutzeri A1501] gi|145571861|gb|ABP80967.1| probable iron-sulphur protein [Pseudomonas stutzeri A1501] Length = 486 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + LD + D Sbjct: 322 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKIITPHMVG----------LDKVPDHPS 371 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 372 ASS--LCGACGEVCPVKIPIPTILRRLREENVKA 403 >gi|332702997|ref|ZP_08423085.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332553146|gb|EGJ50190.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 439 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 13/95 (13%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + L C+ C CS CP+ + P L+ +D + Sbjct: 28 RELLPEGGNLDMCLTCGLCSAGCPA---TGIEGMDPRKFLRLAAMGVD----------EE 74 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + ++ C C +CP ++ + + K + Sbjct: 75 VTSTPWVWHCTMCQRCVYACPMKVDIPQLVYKARQ 109 >gi|330829398|ref|YP_004392350.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Aeromonas veronii B565] gi|328804534|gb|AEB49733.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Aeromonas veronii B565] Length = 400 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 30/97 (30%), Gaps = 18/97 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---- 217 +C+ C C+ CP N Y GP GERL Sbjct: 5 HANQTFDQCIKCTVCTAYCPVAKANP-AYPGPKQA------------GPDGERLRIKSPE 51 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L D L C C +CP G+ IAK K Sbjct: 52 LFDS-ALKYCTNCKRCEVACPSGVRIGDIIAKAKHKY 87 >gi|327482051|gb|AEA85361.1| iron-sulfur protein [Pseudomonas stutzeri DSM 4166] Length = 486 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + LD + D Sbjct: 322 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKIITPHMVG----------LDKVPDHPS 371 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 372 ASS--LCGACGEVCPVKIPIPTILRRLREENVKA 403 >gi|88706626|ref|ZP_01104329.1| Electron transport complex protein rnfC [Congregibacter litoralis KT71] gi|88699122|gb|EAQ96238.1| Electron transport complex protein rnfC [Congregibacter litoralis KT71] Length = 587 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + C+ C C+ +CP+ Y Sbjct: 357 ELPEPEPAQACIRCGLCAEACPARLLPQQLYWFARAQNH------------------EQL 398 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L+ C C+ CP + + Sbjct: 399 EEHHLFDCIECGACSYVCPSHIPLVQ 424 >gi|301058620|ref|ZP_07199624.1| conserved domain protein [delta proteobacterium NaphS2] gi|300447276|gb|EFK11037.1| conserved domain protein [delta proteobacterium NaphS2] Length = 222 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 17/90 (18%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C C + + D D Y C Sbjct: 20 CVECGLCQKECRFLQQYGSP-----------KQIADGFDLLNDAHRSMA------YACSL 62 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CPKGL+PA +++ +++ + Sbjct: 63 CHLCTAVCPKGLDPAAMFLEMRRAAVEKGL 92 >gi|260582990|ref|ZP_05850773.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haemophilus influenzae NT127] gi|260093974|gb|EEW77879.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Haemophilus influenzae NT127] Length = 426 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|259503310|ref|ZP_05746212.1| iron-sulfur cluster binding protein [Lactobacillus antri DSM 16041] gi|259168729|gb|EEW53224.1| iron-sulfur cluster binding protein [Lactobacillus antri DSM 16041] Length = 503 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 9/84 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ C C CP Y + G E L E L Y C Sbjct: 311 QCIRCGACMNVCPVYRQIGGKAYG--------SIYPGPLGEVLSPILGGYEQFQELPYAC 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C+++CP + I + + Sbjct: 363 SLCAACSETCPVKIPLQHLIREHR 386 >gi|73853309|ref|YP_308805.1| hypothetical protein LH0160 [Escherichia coli] gi|73476893|gb|AAZ76508.1| hypothetical protein containing a ferredoxin-like domain [Escherichia coli] Length = 471 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 55/223 (24%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIREKIRQDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + Sbjct: 239 MGMERIAPTFQEVDVLITMLARSAVGARLTGYNTWLTGPREEGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEVLGSEFSDVLRCIRCGACINTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYEDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + A+ I + ++ + KI Sbjct: 358 LP------YACSLCTACNGVCPVKIPLAQLIQTHRQVMAETKI 394 >gi|54308563|ref|YP_129583.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Photobacterium profundum SS9] gi|46912992|emb|CAG19781.1| Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Photobacterium profundum SS9] Length = 403 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 30/96 (31%), Gaps = 10/96 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 QK +C+ C C+ CP N + GP L EF E L Sbjct: 5 QKDTSFDQCIKCTVCTVYCPVAKANP-EFPGPKQCGPDGERLRIKSPEFYDELLKL---- 59 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C +CP G+ IA + + Sbjct: 60 -----CTNCKRCETACPSGVKIGDLIAVARDKHAKK 90 >gi|145631890|ref|ZP_01787646.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae R3021] gi|144982451|gb|EDJ90017.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae R3021] Length = 427 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|323698533|ref|ZP_08110445.1| FAD linked oxidase domain protein [Desulfovibrio sp. ND132] gi|323458465|gb|EGB14330.1| FAD linked oxidase domain protein [Desulfovibrio desulfuricans ND132] Length = 1173 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 28/92 (30%), Gaps = 9/92 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------RDEFQGERLDNLEDPF 222 C C C CP Y P A LI+ E E + L D Sbjct: 729 CTRCGKCKQVCPMYQPARGLMYHPRNKNIALGALIEGIYYSQIQTGEPAHELMKELRDLM 788 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP ++ A A ++ L Sbjct: 789 --DHCTACGKCQAACPVKIDSAGAALSMRSFL 818 >gi|312136964|ref|YP_004004301.1| cob/com heterodisulfide reductase, subunit c [Methanothermus fervidus DSM 2088] gi|311224683|gb|ADP77539.1| CoB/CoM heterodisulfide reductase, subunit C [Methanothermus fervidus DSM 2088] Length = 185 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 14/91 (15%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ SCPS + + + + + + + L+ C Sbjct: 34 EYCFQCGTCTGSCPSGRRTAYK-----VRQIIRKLNM---------GMKEVLADPALWMC 79 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + AI + + Sbjct: 80 TTCYTCQERCPRRVKIVDAIKLARNEAVKEG 110 >gi|297528803|ref|YP_003670078.1| iron-sulfur cluster binding protein [Geobacillus sp. C56-T3] gi|297252055|gb|ADI25501.1| iron-sulfur cluster binding protein [Geobacillus sp. C56-T3] Length = 476 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+D D+++ Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAV--LSPLLDGYDDYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + ++++R Sbjct: 360 PYASSLCAACTEACPVKIPLHELLIKHRQIIVER 393 >gi|262275708|ref|ZP_06053517.1| predicted L-lactate dehydrogenase Iron-sulfur cluster-binding subunit YkgF [Grimontia hollisae CIP 101886] gi|262219516|gb|EEY70832.1| predicted L-lactate dehydrogenase Iron-sulfur cluster-binding subunit YkgF [Grimontia hollisae CIP 101886] Length = 476 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 64/264 (24%), Gaps = 44/264 (16%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK 69 S + I + + + + P + L G L Sbjct: 150 SHIIMPAIHKNKQQVSDTFTHNLKDFQPTTDVD--------QLILTGRNALRQAYQEAEI 201 Query: 70 IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY----------PLPHM 119 + + +C + + N C K + PL Sbjct: 202 GVSGVNFAVAETGTLC----LVENEGNGRMCTTIPKVHIAITGIEKVVEFLSDVPPLYSA 257 Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGLYECVMCA 174 ++S +++ S + P+ +++ +C+ C Sbjct: 258 LTRSATGQNISTYFNMISSPRKDGELDGPEEVHLILLDNGRTQAYHDEELRKTLQCIRCG 317 Query: 175 CCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C CP Y Y GP + + + D + L L Sbjct: 318 ACMNHCPVYTRIGGHAYGTVYPGPIGKIISPHLM--GVDSTKD-----LITASSL----- 365 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMM 253 C + CP + + +++ Sbjct: 366 CGACEEVCPVRIPIPSLLQRLRQE 389 >gi|157736303|ref|YP_001488986.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Arcobacter butzleri RM4018] gi|157698157|gb|ABV66317.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Arcobacter butzleri RM4018] Length = 945 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 20/140 (14%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQ---------KIDGLYECVMCACCSTSCPSY 183 Y+ + I+ ++ ++ + + +C+ C C +CPS Sbjct: 502 YNIMKKIKSLFDPKGLLNPGVIINDDKEAHLKNLKTLPATNEIVDKCIECGFCEPTCPSN 561 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDE-----FQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L P + R + SR E + + L + C T C+ +CP Sbjct: 562 ELT----LTPRQRIVINREI--SRLETIGNYKEAKEYKELYQYDGIETCATCSLCSTACP 615 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 ++ ++ L K Sbjct: 616 VKIDTGSLTKHLRAEQLTSK 635 >gi|56965794|ref|YP_177528.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] gi|56912040|dbj|BAD66567.1| glycolate oxidase iron-sulfur subunit [Bacillus clausii KSM-K16] Length = 435 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 7/104 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E ++CV C C SCP+Y P + + + + Sbjct: 1 MTKPERLLAYQETFDCVQCGYCLPSCPTYLSMEKETHSPRGRIHLVQMAAEGK------- 53 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L E + C C CP + K + K+ L + + Sbjct: 54 LPLSEIEEPIDLCLGCRACETVCPTNVQYGKILDSAKVALKEER 97 >gi|297580214|ref|ZP_06942141.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae RC385] gi|297535860|gb|EFH74694.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae RC385] Length = 413 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|152981034|ref|YP_001352093.1| formate dehydrogenase alpha subunit [Janthinobacterium sp. Marseille] gi|151281111|gb|ABR89521.1| formate dehydrogenase alpha subunit [Janthinobacterium sp. Marseille] Length = 946 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 30/218 (13%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRS-CREGICGSCGMNIDGTNTLAC-V 101 T+ ++ D +L + + P L + G C +C + I+G LA Sbjct: 18 TFELNGREVTGRATDTILTVAKREGIEIPHLCFKEGMDTAGNCRACVVEINGERVLAPSC 77 Query: 102 KDMKDIKGAIAVYPLPHMS----VIKDLVVDM-SHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + V++ L DM Y++H ++ W + + + Sbjct: 78 CRNPTNGMKVNTESERAVKSQKLVLELLQSDMPEADYTRHNEVDEWAAKMGVGKPRFEAR 137 Query: 157 SHEDRQKIDG-----LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + L C+ C C +C N +G A + + D Sbjct: 138 AKVAYDYSHPAIAVNLDACIQCTRCVRACRDEQEND--VIGLAFRGDHAKIVFD------ 189 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIA 248 ++DP C C Q+CP G L PA+ +A Sbjct: 190 ------MDDPMGASTCVACGECVQACPTGALMPARDVA 221 >gi|153829869|ref|ZP_01982536.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae 623-39] gi|148874670|gb|EDL72805.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Vibrio cholerae 623-39] Length = 409 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C+ C C+ CP N + Y GP D + Sbjct: 1 MNHAFIHSAPQNTTFDQCIKCTVCTVYCPVAKANPN-YPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKK 95 >gi|332797726|ref|YP_004459226.1| hypothetical protein Ahos_2057 [Acidianus hospitalis W1] gi|332695461|gb|AEE94928.1| conserved hypothetical protein [Acidianus hospitalis W1] Length = 383 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 20/89 (22%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + +Y D++ Sbjct: 299 CIRCGRCHFHCPIYRAIGNIWGDPPYSGPMGAMWSYIVKGDTKPAM-------------- 344 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C NC + CP +N + + IK + Sbjct: 345 -YCVHSGNCKEVCPMRINIPRVLEYIKNL 372 >gi|306835844|ref|ZP_07468840.1| iron-sulfur cluster binding protein [Corynebacterium accolens ATCC 49726] gi|304568261|gb|EFM43830.1| iron-sulfur cluster binding protein [Corynebacterium accolens ATCC 49726] Length = 501 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 44/178 (24%), Gaps = 24/178 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWSGVTEGDGP 301 Query: 152 KELLQSHEDR--------QKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D +C+ C+ C CP Y Y GP + Sbjct: 302 QNFHIVLLDNGRTAALSSPIGHQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI-- 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 S D+ + L Y C C CP + + I + + + Sbjct: 360 -------SLTPQLTGMKDHNDPSASLPYACSLCGRCDDVCPVKIPLSDVIVENRHQKV 410 >gi|237742641|ref|ZP_04573122.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 4_1_13] gi|294784836|ref|ZP_06750124.1| iron-sulfur cluster binding protein [Fusobacterium sp. 3_1_27] gi|229430289|gb|EEO40501.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 4_1_13] gi|294486550|gb|EFG33912.1| iron-sulfur cluster binding protein [Fusobacterium sp. 3_1_27] Length = 719 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 6/97 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREIFHCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAKIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + C GL+ + I K++ + K Sbjct: 365 -----CLQCGRCNEVCGGGLHISDMIMKLREKNMKEK 396 >gi|220936322|ref|YP_002515221.1| iron-sulfur cluster binding protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997632|gb|ACL74234.1| iron-sulfur cluster binding protein [Thioalkalivibrio sp. HL-EbGR7] Length = 475 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 26/99 (26%), Gaps = 7/99 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + + C+ C C CP Y G ++ E D Sbjct: 306 RDEFREMLRCIRCGACMNHCPVYGAIGGHAYGWVYPGP-MGSVLTPLTLGLREAKDLPN- 363 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP + + ++ +I Sbjct: 364 -----ACTLNGRCAEVCPVRIPLPDLLRTLRHRQFQHQI 397 >gi|126459830|ref|YP_001056108.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249551|gb|ABO08642.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 98 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R+ ++ + C C C CP+Y +R+ GP + + + E L Sbjct: 4 EREILEEVRRCQFCGFCEHVCPTYVATRERHYGPRGRINLI-LMALTNGGVGKEALR--- 59 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C CP G+ A+ I K + R Sbjct: 60 ---GVATCLHCRACDFQCPAGIRIAEVIRSFKALYYRR 94 >gi|256846035|ref|ZP_05551493.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_36A2] gi|256719594|gb|EEU33149.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_36A2] Length = 719 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 6/97 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREIFHCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAKIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + C GL+ + I K++ + K Sbjct: 365 -----CLQCGRCNEVCGGGLHISDMIMKLREKNMKEK 396 >gi|218887980|ref|YP_002437301.1| heterodisulfide reductase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758934|gb|ACL09833.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 384 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + L +C CA CS +CP N+ P + W + D L Sbjct: 18 QAVGGESLKKCYQCATCSVACPISPTNN---PYPRKEMVWASWGL----------KDKLL 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ CH C+ CP+G P ++ ++ M R Sbjct: 65 SDVDIWLCHNCGTCSDLCPRGAKPGDLLSALRNMTYAR 102 >gi|114328993|ref|YP_746150.1| iron-sulfur cluster-binding protein [Granulibacter bethesdensis CGDNIH1] gi|114317167|gb|ABI63227.1| iron-sulfur cluster-binding protein [Granulibacter bethesdensis CGDNIH1] Length = 479 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 32/137 (23%), Gaps = 7/137 (5%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 +DL S R + + +S + + C+ CA C CP Sbjct: 267 QDLTAYTSFSTGARRPGDLDGPEEYHVVLLDNGRSAMIGTEFQDMLRCIRCAACMNHCPV 326 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + G L + L C CP + Sbjct: 327 FGAVGGHAYGWVYPGPMGSVLTPGLIGIEQAALLPNAS-------TFCGACESVCPVKIP 379 Query: 243 PAKAIAKIKMMLLDRKI 259 + + +R + Sbjct: 380 LPGLMRHWREREFERHL 396 >gi|3023737|sp|Q50570|FDHB_METTF RecName: Full=Formate dehydrogenase subunit beta gi|1279771|gb|AAC44821.1| FdhB [Methanothermobacter thermautotrophicus] Length = 394 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 13/154 (8%) Query: 99 ACVKDMKDIKGAIAVY-PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 A + + G I + P+P K + + + + W K + + Sbjct: 229 ADLLEKAVSAGVIEIEDPIP-----KGIEIREKIDQAMVNLAKKWQKNDFNEETGAEILM 283 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + DR L +C+ C C +CP + L + I F ER+ + Sbjct: 284 NLDRYMD-ELNKCIKCYSCREACPICYCEECS-LETKTPEWIEKGKIPPSPLFHLERMLH 341 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + D C C + CP + AK +I Sbjct: 342 MVD-----SCTNCGQCEELCPAEIPLAKIWHEIN 370 >gi|291614082|ref|YP_003524239.1| hypothetical protein Slit_1619 [Sideroxydans lithotrophicus ES-1] gi|291584194|gb|ADE11852.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sideroxydans lithotrophicus ES-1] Length = 420 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 13/109 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LIDSRD 208 D CV C C+ +C Y + P L+ R L Sbjct: 17 DTPIASYFSSCVHCGLCAEACLFYNETGEEKYTPIHKLEPLRRVWKQEYTLLGKLAKMLG 76 Query: 209 EFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L + L C C+ CP G + I K++ + Sbjct: 77 LSKPVTDAELAEWEPLVYDSCTMCGRCSMVCPVGNDITYMIRKMREGMA 125 >gi|726079|gb|AAA87439.1| unknown [Methanothermobacter thermautotrophicus] Length = 380 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 18/189 (9%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVD--------MS 130 R C C M + +AC + I V +++ Sbjct: 179 GRRENCQRCEMMVPRNADIACGNWGAPEGWTFIEVNTERGEKLLEGARSGGYIETKTLPK 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSD 188 IE + ++ + + L+ + Y C+ C C +CP + N Sbjct: 239 KMIDIRDKIEKAMIRMAGEFQDKYLEEEYPSIEEWDEYWRRCINCFACRDACPVCFCNEC 298 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L L++A D FQG R+ ++ + C C CP + A+ Sbjct: 299 E-LERDYLMEAEDRTPDPL-TFQGVRMSHMG-----FSCINCGQCEDVCPMDIPVARIYH 351 Query: 249 KIKMMLLDR 257 +I+ DR Sbjct: 352 RIQRKYRDR 360 >gi|282858607|ref|ZP_06267769.1| putative iron-sulfur cluster-binding protein [Prevotella bivia JCVIHMP010] gi|282588611|gb|EFB93754.1| putative iron-sulfur cluster-binding protein [Prevotella bivia JCVIHMP010] Length = 471 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 14/96 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWW---NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C +CP Y S Y P + L D + Sbjct: 298 HWSSLKCIRCGACMNTCPVYRRTTGYSYSYFIPGPIGINLGMLHDPE-----------KY 346 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C ++C CP +NP I + L + Sbjct: 347 SGNVSACSLCLSCDHVCPAKVNPGSQIYNWRQRLQE 382 >gi|86150748|ref|ZP_01068964.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315124479|ref|YP_004066483.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841918|gb|EAQ59164.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315018201|gb|ADT66294.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 421 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|317152785|ref|YP_004120833.1| hypothetical protein Daes_1071 [Desulfovibrio aespoeensis Aspo-2] gi|316943036|gb|ADU62087.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 426 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 8/92 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PF 222 D L C+ C C CP + L D E L + E Sbjct: 15 DDQLVGCMRCGMCQAVCPIFAQTGREADVTRGKLALL-------DGLAKEMLTDAEGVNE 67 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L RC C +CP G+ K + ++ Sbjct: 68 KLNRCLLCGTCQSNCPSGVKIMDIFLKARAIM 99 >gi|229084383|ref|ZP_04216663.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-44] gi|228698923|gb|EEL51628.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-44] Length = 417 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKGVVDGLIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G++ + + + ++ K Sbjct: 55 CRACEPVCPSGVSYGHLLEEARDIINQNK 83 >gi|198284953|ref|YP_002221274.1| hypothetical protein Lferr_2883 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667513|ref|YP_002427638.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249474|gb|ACH85067.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519726|gb|ACK80312.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 453 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDS-----RDEFQGERL- 215 + CV C C+ C Y D P QAY+ R R+ Sbjct: 56 YMESCVHCGQCAEVCQYYVQTGDPRYTPIWKLEPFKQAYKRETGPFAPFFRLFNLKRRVT 115 Query: 216 -DNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 LED L C CT CP G++ A + + + + Sbjct: 116 VQELEDWQDLIYDSCTQCGRCTMVCPMGIDIASLVGLARHGMAAAGL 162 >gi|218294952|ref|ZP_03495806.1| iron-sulfur cluster binding protein [Thermus aquaticus Y51MC23] gi|218244860|gb|EED11384.1| iron-sulfur cluster binding protein [Thermus aquaticus Y51MC23] Length = 466 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 9/136 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L +S + E + V + + C+ C C +CP Y Sbjct: 265 LSTYVSLIGGPAKEGEEGPEEVHVVLVDHGRTALLADPEAWETLRCLRCGACLNACPVYR 324 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNP 243 G ++D L +LE+ + L Y C ++CP + Sbjct: 325 QTGGHPYGYVYSGPIGA-VLDPG-------LLSLEEAYPLPYASTLCGACLEACPVKIPI 376 Query: 244 AKAIAKIKMMLLDRKI 259 + + + + + + Sbjct: 377 PRLLLTWRHRAVAKGL 392 >gi|300711306|ref|YP_003737120.1| FAD linked oxidase domain protein [Halalkalicoccus jeotgali B3] gi|299124989|gb|ADJ15328.1| FAD linked oxidase domain protein [Halalkalicoccus jeotgali B3] Length = 1003 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 63/221 (28%), Gaps = 17/221 (7%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI--CGSCGMNID----GTNTLACVKDMK 105 L+ ++ + I ++I + G G + G + K++K Sbjct: 475 LNLKDGEGIETMHSITDEITDLVVEHHGAFSGEHGDGMARTEFNPKMFGDDLWGAFKELK 534 Query: 106 DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ-----HRSIEPWLKTVSPKPAKELLQSHED 160 + P V +D D + +R + + L ++ Sbjct: 535 TAFDPEWLM-HPGNVVYRDGPEDPGPDTERGVGADNRENLRYGAGYQSIEPQTKLDFTDE 593 Query: 161 RQKIDGLYECVMCACCSTS----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + C C C + CP+Y D R I S D + E Sbjct: 594 GGFSHLVELCNGCGTCRQTDDVMCPTYRGMKDEIATTRGRANMLRAAI-SGDLSEEEMYT 652 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C CP G++ K A+ K +R Sbjct: 653 EQFQEEVLDLCVGCKGCKSDCPTGVDLGKLKAETKHQYHER 693 >gi|212704706|ref|ZP_03312834.1| hypothetical protein DESPIG_02769 [Desulfovibrio piger ATCC 29098] gi|212671833|gb|EEB32316.1| hypothetical protein DESPIG_02769 [Desulfovibrio piger ATCC 29098] Length = 394 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP + P + W + + L L+ Sbjct: 24 LKKCYQCATCSVACP---MAPENAPYPRKEMVWASWGL----------KEKLATDVDLWL 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH NC CP+G PA + + M+ Sbjct: 71 CHNCGNCADLCPRGARPADVMGAARNMVYR 100 >gi|197120769|ref|YP_002132720.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Anaeromyxobacter sp. K] gi|220915481|ref|YP_002490785.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-1] gi|196170618|gb|ACG71591.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter sp. K] gi|219953335|gb|ACL63719.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 121 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 11/85 (12%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + + GP +L A + G+ + C + Sbjct: 35 CMECELCMGACPLCVKRGEAFPGPKGILAAAK---------TGKVDAAI--AAGALDCTS 83 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 CT CP+GL P + + + + Sbjct: 84 CGACTHVCPRGLAPQREVERWRAEA 108 >gi|57237816|ref|YP_179064.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter jejuni RM1221] gi|205356702|ref|ZP_03223463.1| putative oxidoreductase ferredoxin type electron transport protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166620|gb|AAW35399.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni RM1221] gi|205345440|gb|EDZ32082.1| putative oxidoreductase ferredoxin type electron transport protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315058434|gb|ADT72763.1| Putative oxidoreductase ferredoxin-type protein, clusters with CPO [Campylobacter jejuni subsp. jejuni S3] Length = 421 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|46578669|ref|YP_009477.1| oxidoreductase [Desulfovibrio vulgaris str. Hildenborough] gi|46448080|gb|AAS94736.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232543|gb|ADP85397.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio vulgaris RCH1] Length = 941 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPF 222 + +C+ C C CPS P + +R + +D + RL L + Sbjct: 536 HSIIDKCIECGFCEPVCPSRNVT----FTPRQRIVGWREIRRMQDGAEKSRLLRELFSGY 591 Query: 223 RL---YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C CP G+N I +++ Sbjct: 592 GYLGDDTCATDGLCATRCPVGINTGSFIKELR 623 >gi|227499954|ref|ZP_03930047.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Anaerococcus tetradius ATCC 35098] gi|227218063|gb|EEI83336.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Anaerococcus tetradius ATCC 35098] Length = 441 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L D+ + + C+ CA C +CP Y L +++ ++ R Sbjct: 348 EKASNCILVLASDQAQPLEVSPCIRCARCVDACPVYLL----------PLYIHKFSLEER 397 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E E L+ ++ C +C+ CP +AI K + Sbjct: 398 FEKAQE-LNIMD-------CIECGSCSFVCPSNRPLVEAIKFGKRQIRQAG 440 >gi|157415248|ref|YP_001482504.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386212|gb|ABV52527.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747890|gb|ADN91160.1| Iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni M1] Length = 421 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|86153186|ref|ZP_01071391.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612950|ref|YP_001000670.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter jejuni subsp. jejuni 81-176] gi|85844071|gb|EAQ61281.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249218|gb|EAQ72179.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 421 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|119775574|ref|YP_928314.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] gi|119768074|gb|ABM00645.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 935 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 1/84 (1%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP+ N A L + R S DE R+ + + C Sbjct: 540 DKCIECGFCEKTCPTSALNLTPRQRIATLREISRLEA-SGDEEAASRMRDAAKYDVVDTC 598 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 CT +CP + + + K++ Sbjct: 599 AACQLCTIACPVDNSMGQLVRKLR 622 >gi|307596382|ref|YP_003902699.1| hypothetical protein Vdis_2280 [Vulcanisaeta distributa DSM 14429] gi|307551583|gb|ADN51648.1| protein of unknown function DUF224 cysteine-rich region domain protein [Vulcanisaeta distributa DSM 14429] Length = 374 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 15/112 (13%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 E + + L C C CST CP + Y I+ +A ++D + Sbjct: 1 MPVTVNFELREELLKLVPTLSLCYQCGTCSTYCPI---TDESYNIRLIVKKAQLGVVDPK 57 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D ++ C T C CP + + I+ M + K+ Sbjct: 58 DFKV------------IWDCVTCGTCQALCPNNVEIVNLVEVIRTMAMKSKV 97 >gi|197287397|ref|YP_002153269.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Proteus mirabilis HI4320] gi|227358363|ref|ZP_03842703.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Proteus mirabilis ATCC 29906] gi|194684884|emb|CAR47032.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Proteus mirabilis HI4320] gi|227161399|gb|EEI46443.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Proteus mirabilis ATCC 29906] Length = 397 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 10/89 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C+T CP N Y GP D + D + Sbjct: 4 QDTSFESCIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPMLYDE 53 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I++ K Sbjct: 54 ALKYCTNCKRCEVACPSDVKIGDIISRAK 82 >gi|163735496|ref|ZP_02142929.1| 4Fe-4S binding domain protein, putative [Roseobacter litoralis Och 149] gi|161391309|gb|EDQ15645.1| 4Fe-4S binding domain protein, putative [Roseobacter litoralis Och 149] Length = 468 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 50/192 (26%), Gaps = 35/192 (18%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVY----PLPHMSVIKDLVVD---------MSHF 132 GS + N K + + L H +V L+ + F Sbjct: 213 GSFVTITNEGNAELTTTPPKTHIVTVGIEKMVPSLKHAAVFIRLLSRAAIGTEITQYTTF 272 Query: 133 YSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWN 186 Y+ + + + +S + + C+ C C CP Y Sbjct: 273 YNGPKRAGDRDGPENLNIVLVDNHRSDMLSDFLRPMLRCIRCGACMNHCPVYATVGGHAY 332 Query: 187 SDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y GP + A L S+D C C + CP + Sbjct: 333 GAVYPGPMGSVLTPAMTGLKGSKDLPNA--------------CTLNGRCKEVCPVNIPLP 378 Query: 245 KAIAKIKMMLLD 256 + ++ + Sbjct: 379 DMLRSLRARQFE 390 >gi|71906309|ref|YP_283896.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dechloromonas aromatica RCB] gi|71845930|gb|AAZ45426.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Dechloromonas aromatica RCB] Length = 480 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 21/103 (20%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 + C+ C C CP Y Y GP + Y + ++ D Sbjct: 316 YQDMLRCIRCGACMNHCPVYFSLGGHAYGWVYPGPMGSVLTPLYTGIENALDLPHAS--- 372 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + +++ ++R + Sbjct: 373 -----------TGCNQCGSVCPVRIPLPTLMHRLREEQVERGL 404 >gi|325276132|ref|ZP_08141941.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas sp. TJI-51] gi|324098731|gb|EGB96768.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas sp. TJI-51] Length = 806 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKQRAGIETRELMRTYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ D Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAADHG 625 >gi|157962813|ref|YP_001502847.1| FAD linked oxidase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847813|gb|ABV88312.1| FAD linked oxidase domain protein [Shewanella pealeana ATCC 700345] Length = 939 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP+ N A L + R L S D+ E++ + C Sbjct: 540 DKCIECGFCEKTCPTSALNMSPRQRIATLREIER-LEQSGDKQAAEQMRAAAKYDVVDTC 598 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 CT +CP + + + K++ Sbjct: 599 AACQLCTIACPVDNSMGELVRKLR 622 >gi|332828661|gb|EGK01353.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Dysgonomonas gadei ATCC BAA-286] Length = 404 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 10/104 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + +C+ C C+ CP N D Y GP D + Sbjct: 1 MNLQQHNISDNNFEQCIKCTICTVYCPVAAVNPD-YPGPKQA---------GPDGERLRL 50 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C +CP + I ++ +K Sbjct: 51 KKSNFYDEALKYCINCKRCEVACPSNVKIGDIIQSARIKYSKKK 94 >gi|288940804|ref|YP_003443044.1| FAD linked oxidase domain-containing protein [Allochromatium vinosum DSM 180] gi|288896176|gb|ADC62012.1| FAD linked oxidase domain protein [Allochromatium vinosum DSM 180] Length = 1283 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C ++ + ++ LG ++++A+ + +R + + D Sbjct: 814 HCLRCGKCKPKCMTHVPRANLLYSPRNKILGTGLIIEAFLYEEQTRRGLSLRHFEEMNDI 873 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ + +++ +L++R Sbjct: 874 --ADHCTVCHKCLTPCPVNIDFGEVTTRLRRILVERG 908 >gi|239904833|ref|YP_002951571.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239794696|dbj|BAH73685.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 323 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP + D + + + Sbjct: 201 AFWRYHMDRCIRCYACRNACPMCVCRDHCIAQSREPHWLSQ-----EDSVTEKLMFQVVH 255 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC C ++CP + + + Sbjct: 256 AMHLAGRCTECGECQRACPMDIPVLALKKHLNRTI 290 >gi|157962815|ref|YP_001502849.1| hypothetical protein Spea_2997 [Shewanella pealeana ATCC 700345] gi|157847815|gb|ABV88314.1| protein of unknown function DUF162 [Shewanella pealeana ATCC 700345] Length = 457 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 12/91 (13%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ C C +CP Y + I + RD D + + C Sbjct: 306 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGSQRD-----------DTNSIPWAC 354 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP + K I + + + Sbjct: 355 TLCGSCSYVCPTKVPLDKIIHHHRRLKAEAG 385 >gi|153952441|ref|YP_001397928.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939887|gb|ABS44628.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. doylei 269.97] Length = 421 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|77164681|ref|YP_343206.1| electron transport complex protein RnfC [Nitrosococcus oceani ATCC 19707] gi|76882995|gb|ABA57676.1| Electron transport complex, RnfABCDGE type, C subunit [Nitrosococcus oceani ATCC 19707] Length = 515 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 18/97 (18%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K LL + + C+ C C +CP L P L R Sbjct: 348 KTTNCLLAGLHEDTRQPPAMPCIRCGACVEACPV-------GLLPQQLYWHAR------- 393 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + LD +D L+ C C CP + + Sbjct: 394 ---AKELDKTQDYH-LFDCIECGCCAYVCPSHIPLVQ 426 Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 10/20 (50%) Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C ++CP GL P + Sbjct: 369 CIRCGACVEACPVGLLPQQL 388 >gi|291277018|ref|YP_003516790.1| putative iron-sulfur protein [Helicobacter mustelae 12198] gi|290964212|emb|CBG40061.1| putative iron-sulfur protein [Helicobacter mustelae 12198] Length = 483 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 17/111 (15%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSR 207 + + + C+ C C CP Y Y GP + Sbjct: 298 NHRSNMLNDKNFFKSLSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVI--------- 348 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + C C++ CP + A+ I ++ + + Sbjct: 349 ---SPQLFGINNCAPIVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQG 396 >gi|145591437|ref|YP_001153439.1| hypothetical protein Pars_1219 [Pyrobaculum arsenaticum DSM 13514] gi|145283205|gb|ABP50787.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 490 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 11/111 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI--DSRDEFQGERL-- 215 +R + CV C C +CP+Y D + P + R ++ DS RL Sbjct: 59 NRNVRMAVDVCVHCGVCLDNCPTYVRTKDIFNSPVGRAELIRAVLKADSPSGKLFGRLVG 118 Query: 216 DNLEDPFRL-------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + D L Y+C C +CP G++ A ++ +L + I Sbjct: 119 AKVLDEEHLEKIYTYYYQCLECRKCGYACPFGIDQADVTRAVRDVLYEAGI 169 >gi|254433139|ref|ZP_05046647.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Nitrosococcus oceani AFC27] gi|207089472|gb|EDZ66743.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Nitrosococcus oceani AFC27] Length = 491 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 18/97 (18%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K LL + + C+ C C +CP L P L R Sbjct: 324 KTTNCLLAGLHEDTRQPPAMPCIRCGACVEACPV-------GLLPQQLYWHAR------- 369 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + LD +D L+ C C CP + + Sbjct: 370 ---AKELDKTQDYH-LFDCIECGCCAYVCPSHIPLVQ 402 Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 10/20 (50%) Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C ++CP GL P + Sbjct: 345 CIRCGACVEACPVGLLPQQL 364 >gi|145637919|ref|ZP_01793562.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittHH] gi|145268889|gb|EDK08849.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Haemophilus influenzae PittHH] Length = 314 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 12/92 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-D 220 + C+ C C+ CP N Y GP S + + RL + E Sbjct: 24 YIDESFESCIKCTACTAVCPVSRNNP-LYPGPK----------QSGPDGERLRLKSAELY 72 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C +CP + I + + Sbjct: 73 DEALKYCTNCKRCEVACPSDVKIGDLIVRARN 104 >gi|315928913|gb|EFV08169.1| 4Fe-4S binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 180 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 17/97 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + C+ C C CP Y Y GP + Sbjct: 3 AHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGPIGEVI------------SPNI 50 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C++ CP + A I K++ Sbjct: 51 FGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLR 87 >gi|78356254|ref|YP_387703.1| heterodisulfide reductase subunit C [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218659|gb|ABB38008.1| heterodisulfide reductase, C subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 204 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R+ L C C C+ CP + L+Q R RDE R Sbjct: 18 ARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGR-----RDEVLRCR----- 67 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + +CT CP ++ A+ + ++ M + Sbjct: 68 ---SLWLCASCQSCTTRCPNNIDVARVVDVLRHMAREAG 103 >gi|289580611|ref|YP_003479077.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Natrialba magadii ATCC 43099] gi|289530164|gb|ADD04515.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Natrialba magadii ATCC 43099] Length = 478 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 10/112 (8%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 ++ E+ G C C+ C T+CP D + GP Sbjct: 33 NDEFEPVQVFPEAEEMDLRPGADNCYKCSTCDTNCPVAEV-DDEFPGPK---------FQ 82 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++++ +R D+ + + +C M C +CP + ++ + ++ Sbjct: 83 GPEQWRLKRQDDHDIDDSVMKCSNCMRCDSACPSSVPLSQMHNTARAEYVEE 134 >gi|90417026|ref|ZP_01224955.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2207] gi|90331373|gb|EAS46617.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2207] Length = 596 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 25/113 (22%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S+ + + C+ C C+ +CP L Q + Sbjct: 351 NCILAPSYAEIPDDEPAQPCIRCGMCAEACPVSLLPQQ--LFWYAQAQEH---------- 398 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLD 256 +RL+ L+ C C+ CP + + I + + + Sbjct: 399 --DRLEA----HNLFDCIECGACSYVCPSNIPLVQYYRAAKGEIRQAREEKVK 445 >gi|307130260|ref|YP_003882276.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Dickeya dadantii 3937] gi|306527789|gb|ADM97719.1| Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Dickeya dadantii 3937] Length = 475 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 9/98 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C +CP+Y G L L ED Sbjct: 305 PFHDILRCIRCGACINTCPAYRHIGGHGYGSIYPGPVGAVL--------SPLLGGYEDFK 356 Query: 223 RL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C C CP + + I + + L + + Sbjct: 357 HLPYACSLCTACDDVCPVRIPLSSLILQHRRTLAENGM 394 >gi|283956389|ref|ZP_06373869.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792109|gb|EFC30898.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 1336] Length = 421 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLSAYKEGILELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|254367653|ref|ZP_04983674.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. holarctica 257] gi|134253464|gb|EBA52558.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. holarctica 257] Length = 444 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 3 DELYKVMQEIKLLLDPHNLLNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 62 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 63 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 118 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 119 VDINTGSFIKDLRAEQNKANI 139 >gi|26991420|ref|NP_746845.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida KT2440] gi|24986491|gb|AAN70309.1|AE016671_10 D-lactate dehydrogenase, putative [Pseudomonas putida KT2440] Length = 936 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKQRAGIDTRELMQSYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ D Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAADHA 625 >gi|148549805|ref|YP_001269907.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida F1] gi|148513863|gb|ABQ80723.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida F1] Length = 936 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKQRAGIDTRELMQSYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C Q CP G+N + + K++ D Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAADHA 625 >gi|261821935|ref|YP_003260041.1| iron-sulfur cluster binding protein [Pectobacterium wasabiae WPP163] gi|261605948|gb|ACX88434.1| iron-sulfur cluster binding protein [Pectobacterium wasabiae WPP163] Length = 473 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 55/224 (24%), Gaps = 25/224 (11%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIRQKIREDFLSAEIGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + + Sbjct: 239 MGMERIAPTFEEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPQEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + C+ C C +CP+Y G + L Sbjct: 299 SQILGSAFRDILRCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVI--------SPLLG 350 Query: 217 NLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D L Y C C CP + + I K + ++ + I Sbjct: 351 GYRDFKELPYACSLCTACDTVCPVRIPLSSLILKHRRVMAESGI 394 >gi|317122551|ref|YP_004102554.1| iron-sulfur cluster binding protein [Thermaerobacter marianensis DSM 12885] gi|315592531|gb|ADU51827.1| iron-sulfur cluster binding protein [Thermaerobacter marianensis DSM 12885] Length = 935 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 9/95 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y G + L L+ Sbjct: 356 FQEALHCIRCGACLNACPVYRQMGGHPYGGVYSGPIGAVI--------TPLLGGLDGWKD 407 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L Y C ++CP + + ++ +++R Sbjct: 408 LPYASSLCGACYEACPVMIPLHDLLVDLREEVVNR 442 >gi|315932118|gb|EFV11061.1| 4Fe-4S binding domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 308 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|11499362|ref|NP_070601.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] gi|2648776|gb|AAB89477.1| iron-sulfur binding reductase [Archaeoglobus fulgidus DSM 4304] Length = 384 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C+ CP ++ P + R+ + + +E+ + C Sbjct: 22 RCYQCGTCTGICPVSTTDAS---FPRKPVLLSRFGVG----------EVIENFEEAWLCL 68 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + CT+ CP+ + P++ + IK +L++ Sbjct: 69 SCNLCTEFCPRDVKPSETMLAIKRVLVENG 98 >gi|313500646|gb|ADR62012.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida BIRD-1] Length = 936 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR 226 +C+ C C CPS L P + +R + + R L + Sbjct: 538 DKCIECGFCEPVCPSKGLT----LSPRQRIVMWRDIQAKQRAGIDTRELMQSYQYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C Q CP G+N + + K++ D Sbjct: 594 CAATGLCAQRCPVGINTGELVKKLRSQAAD 623 >gi|284998750|ref|YP_003420518.1| protein of unknown function DUF162 [Sulfolobus islandicus L.D.8.5] gi|284446646|gb|ADB88148.1| protein of unknown function DUF162 [Sulfolobus islandicus L.D.8.5] Length = 383 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSAVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC + CP +N K + +K K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFFMMK 377 >gi|257068472|ref|YP_003154727.1| (4Fe-4S) cluster-containing protein [Brachybacterium faecium DSM 4810] gi|256559290|gb|ACU85137.1| (4Fe-4S) cluster-containing protein [Brachybacterium faecium DSM 4810] Length = 509 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 19/107 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWL-IDSRDEFQGE 213 + + C+ C+ C CP Y Y GP + + + + D Sbjct: 323 EDPEGRSALHCIRCSACLNVCPVYARTGGHAYGSTYPGPIGAILSPQMTGMHGSD----- 377 Query: 214 RLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DP Y C CP +N + + ++ +DR+ Sbjct: 378 ------DPNSTLPYASSLCGACYDVCPVKINIPEILVHLRAKDVDRR 418 >gi|300858246|ref|YP_003783229.1| hypothetical protein cpfrc_00828 [Corynebacterium pseudotuberculosis FRC41] gi|300685700|gb|ADK28622.1| hypothetical protein cpfrc_00828 [Corynebacterium pseudotuberculosis FRC41] gi|302205967|gb|ADL10309.1| Putative iron-sulfur protein [Corynebacterium pseudotuberculosis C231] gi|302330520|gb|ADL20714.1| Putative iron-sulfur protein [Corynebacterium pseudotuberculosis 1002] gi|308276202|gb|ADO26101.1| Putative iron-sulfur protein [Corynebacterium pseudotuberculosis I19] Length = 514 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 55/190 (28%), Gaps = 29/190 (15%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVY-PLPHMS---VIKDLVVDMSHFYSQHRSIEP 141 G+ + N C+ + + + + LP V L+ S Q + Sbjct: 233 GTVTIMESEGNGRMCLTLPETLISVMGIEKILPTFQDLEVFLQLLPRSSTGERQAPYVST 292 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSD 188 W K D + L + C+ C+ C CP Y Sbjct: 293 WSGVTEGDGPKNFHIVLVDNGRTAVLADELGREALKCIRCSACLNVCPVYERAGGHAYGS 352 Query: 189 RYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 Y GP AIL + D D + + Y C + CP + Sbjct: 353 TYPGPIGAILSPQMTGIKDKHDP----------NAYLPYASSLCGRCNEVCPVKIPFTDI 402 Query: 247 IAKIKMMLLD 256 + +++ ++ Sbjct: 403 LLELRHKKIE 412 >gi|284926221|gb|ADC28573.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 421 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLSAYKEGILELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|256830109|ref|YP_003158837.1| hypothetical protein Dbac_2341 [Desulfomicrobium baculatum DSM 4028] gi|256579285|gb|ACU90421.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfomicrobium baculatum DSM 4028] Length = 439 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 13/86 (15%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C CS+ CP+ + + P L+ +D + + ++ Sbjct: 29 NLNMCLTCGACSSGCPA---SGLENMDPRKFLRMAALGMD----------EEILGTPWVW 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP ++ + + +++ Sbjct: 76 MCTMCQRCIYACPMKIDIPRLVYEVR 101 >gi|237785877|ref|YP_002906582.1| putative iron-sulfur cluster binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758789|gb|ACR18039.1| putative iron-sulfur cluster binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 562 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 16/175 (9%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W T Sbjct: 244 NGRMCLTLPETLISVMGIEKLLPTFKDLEVFLQLLPRSSTGERMNPYTSLWSGTTEGDGP 303 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D + L C+ C+ C CP Y G L Sbjct: 304 KNFHIVLIDNGRTHALANAIGREALKCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAIL 363 Query: 204 IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q +++ EDP Y C + CP ++ A+ +++ ++ Sbjct: 364 -----TPQLAGMESAEDPNASLPYASSLCGACFEVCPVEIDIPSALLELRHQKIE 413 >gi|222479552|ref|YP_002565789.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Halorubrum lacusprofundi ATCC 49239] gi|222452454|gb|ACM56719.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Halorubrum lacusprofundi ATCC 49239] Length = 499 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D +G C C C TSCP + + GP ++++ +R ++ + Sbjct: 93 DLDLREGADSCYKCTSCDTSCPVAEV-DEEFPGPK---------FQGPEQWRLKRKEDHD 142 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C +CP + ++ + + ++ ++ Sbjct: 143 IDESITSCSNCMRCDDACPSSVPLSQMHNEARGQFVESQM 182 >gi|24373093|ref|NP_717136.1| iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] gi|24347276|gb|AAN54580.1|AE015597_13 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 464 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 16/107 (14%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQ 211 + + +C+ C C +CP Y + Y P + A D+ + Sbjct: 298 RTEMMKDKILAESLKCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGATHDNTNSIA 357 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 -------------WACTLCGSCTYVCPTKVPLDKIIHHHRRLKAEAG 391 >gi|34762283|ref|ZP_00143288.1| iron-sulfur cluster-binding protein; dehydrogenase subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888069|gb|EAA25131.1| iron-sulfur cluster-binding protein; dehydrogenase subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 572 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 6/97 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 159 PDFREIFHCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAKIQNI 217 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + C GL+ + I K++ + K Sbjct: 218 -----CLQCGRCNEVCGGGLHISDMIMKLREKNMKEK 249 >gi|325002258|ref|ZP_08123370.1| (4Fe-4S) cluster-containing protein [Pseudonocardia sp. P1] Length = 513 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 14/98 (14%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + R + D+L Sbjct: 313 RQALRCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAI----LTPQLRGVGSDPQTDSLP 368 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + CP ++ + + ++ +++ Sbjct: 369 YASSL-----CGACFEVCPVRIDIPEVLVHLRSEVVEA 401 >gi|308049499|ref|YP_003913065.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] gi|307631689|gb|ADN75991.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] Length = 938 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 1/105 (0%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + + D + C+ C C +CP+ N L + R L S Sbjct: 519 NEDSEIHIKAIKQAAVVDDWVDRCIECGFCEKTCPTSSLNMSPRHRITTLREIAR-LEQS 577 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ +++ + C CT +CP N + +++ Sbjct: 578 GEQAAAQQMREAAQYDVIDTCTACQLCTIACPVDNNMGMLVRELR 622 >gi|300114448|ref|YP_003761023.1| electron transport complex RnfABCDGE type subunit C [Nitrosococcus watsonii C-113] gi|299540385|gb|ADJ28702.1| electron transport complex, RnfABCDGE type, C subunit [Nitrosococcus watsonii C-113] Length = 515 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K LL + C+ C C +CP L P L R Sbjct: 348 KTTNCLLAGLYENTHHPPAMPCIRCGACVEACPV-------GLLPQQLYWHTR------- 393 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + LD +D L+ C C CP + + Sbjct: 394 ---AKELDKTQDYH-LFDCIECGCCAYVCPSHIPLVQ 426 Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 10/20 (50%) Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C ++CP GL P + Sbjct: 369 CIRCGACVEACPVGLLPQQL 388 >gi|311896118|dbj|BAJ28526.1| putative iron-sulfur protein [Kitasatospora setae KM-6054] Length = 472 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 46/176 (26%), Gaps = 20/176 (11%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ + W TV Sbjct: 232 NGRMCLTLADTLISVVGIEKTVPTWADLEVFLQLLARNATGERMAPYTSTWTGTVDGDGP 291 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAY 200 + D + L C+ C C +CP Y G P + Sbjct: 292 RAFHLVLVDNGRTRALADPVGRQALRCIRCGACMNTCPVYERTGGHAYGSVYPGPIGAIL 351 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L+ D+ Q L Y C + CP + + ++ + D Sbjct: 352 NPLLRGPDDPQTASLP--------YASTLCGACNEVCPVRIRFTDVLLDLRAQVAD 399 >gi|327542203|gb|EGF28694.1| FAD linked oxidase domain protein [Rhodopirellula baltica WH47] Length = 983 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 37/128 (28%), Gaps = 14/128 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRY 190 + + + + L C CA C CP + S Sbjct: 526 KWVASMMPHQPAPQLEVLQHWPGGAPITTTTRACNGCARCRADASDERQCPMFRITSIEE 585 Query: 191 LGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 P R ++ + E GER + D C +C CP +N K + Sbjct: 586 ASPRAKANLLRGVLSGQLPVSELTGERAKAVAD-----LCFNCHSCRVECPASVNIPKVV 640 Query: 248 AKIKMMLL 255 +IK + Sbjct: 641 GEIKAQYV 648 >gi|323698411|ref|ZP_08110323.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. ND132] gi|323458343|gb|EGB14208.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans ND132] Length = 426 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 14/95 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C CP + + L L+D + L DP Sbjct: 15 DDQLVGCMRCGMCQAVCPIFKISGKEADVTRGKLA----LLDGLAS------EMLSDPEG 64 Query: 224 ----LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC C +CP G++ K + ++ Sbjct: 65 VNEKLNRCLLCGTCQANCPSGVSVMDIFLKARAIM 99 >gi|317486043|ref|ZP_07944897.1| methyl-viologen-reducing hydrogenase [Bilophila wadsworthia 3_1_6] gi|316922721|gb|EFV43953.1| methyl-viologen-reducing hydrogenase [Bilophila wadsworthia 3_1_6] Length = 489 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 8/97 (8%) Query: 159 EDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 EDR + C+ C C +CP + + D + Sbjct: 360 EDRMGFWRGHIDRCIRCYACRNACPMCVCRDNCVADSREPHWLTQ-----EDSPTQKMFF 414 Query: 217 NLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L L RC C ++CP G+ ++ Sbjct: 415 QLIHAMHLAGRCTGCGECNRACPMGIPVGALKLQMGR 451 >gi|300711490|ref|YP_003737304.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Halalkalicoccus jeotgali B3] gi|299125173|gb|ADJ15512.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Halalkalicoccus jeotgali B3] Length = 426 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 10/102 (9%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +T E+ E G +C C+ C + CP + D + GP Sbjct: 5 ETSDEFKPVEVFPDSESMDLRGGADDCYKCSTCDSECPVAAVDDD-FPGPK--------- 54 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 ++++ +R ++ E + C M C +CP G+ ++ Sbjct: 55 FQGPEQWRLKRKEDTEIDDSVMSCSNCMRCDSACPSGVPLSQ 96 >gi|325673665|ref|ZP_08153356.1| iron-sulfur cluster binding protein [Rhodococcus equi ATCC 33707] gi|325555686|gb|EGD25357.1| iron-sulfur cluster binding protein [Rhodococcus equi ATCC 33707] Length = 504 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 50/182 (27%), Gaps = 28/182 (15%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W Sbjct: 245 NGRMCLTLPQTLITVMGIEKVIPTYRDLEVFLQLLPRSSTGERMNPYTSMWTGVTPDDGP 304 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + L C+ C+ C CP Y Y GP + Sbjct: 305 QNFHLVLLDNGRTAALADSVGREALNCIRCSACLNVCPVYERTGGHAYGSTYPGPIGAVL 364 Query: 199 AYRWL-IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +D +D DP + C ++CP ++ + +++ + Sbjct: 365 TPQLAGMDGKD-----------DPNSTLPFASSLCGACFEACPVKIDIPSLLVELRHQKV 413 Query: 256 DR 257 + Sbjct: 414 QK 415 >gi|317152507|ref|YP_004120555.1| hypothetical protein Daes_0792 [Desulfovibrio aespoeensis Aspo-2] gi|316942758|gb|ADU61809.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 5/86 (5%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 EC++C C CP LGP L L + + Sbjct: 1 MAGECILCGKCLEVCPLLAATGREELGPRAKADLCALLA-----GDESLLASADVARLAG 55 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C C +G++ +A ++ Sbjct: 56 LCLGCGRCATVCSQGVDVPGLVAGLR 81 >gi|32473850|ref|NP_866844.1| oxidase [Rhodopirellula baltica SH 1] gi|32444386|emb|CAD74385.1| putative oxidase [Rhodopirellula baltica SH 1] Length = 1111 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 37/128 (28%), Gaps = 14/128 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRY 190 + + + + L C CA C CP + S Sbjct: 654 KWVASMMPHQPAPQLEVLQHWPGGAPITTTTRACNGCARCRADASDERQCPMFRITSIEE 713 Query: 191 LGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 P R ++ + E GER + D C +C CP +N K + Sbjct: 714 ASPRAKANLLRGVLSGQLPVSELTGERAKAVAD-----LCFNCHSCRVECPASVNIPKVV 768 Query: 248 AKIKMMLL 255 +IK + Sbjct: 769 GEIKAQYV 776 >gi|313126432|ref|YP_004036702.1| glycerol 3-phosphate dehydrogenase (quinone) subunit c [Halogeometricum borinquense DSM 11551] gi|312292797|gb|ADQ67257.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Halogeometricum borinquense DSM 11551] Length = 433 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 10/100 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + G C C C TSCP N D + GP ++++ +R D+ + Sbjct: 29 EMDLRPGADNCYKCTSCDTSCPVAEVNDD-FPGPK---------FQGPEQWRLKRKDDAD 78 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C +CP + ++ + +D ++ Sbjct: 79 IDDSIMSCSNCMRCDNACPSSVPLSQMHNTARGEYVDEQM 118 >gi|117619209|ref|YP_857068.1| iron-sulfur cluster binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560616|gb|ABK37564.1| iron-sulfur cluster binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 478 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 22/86 (25%), Gaps = 7/86 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G + + L + Sbjct: 315 QCIRCGACMNHCPVYTRIGGHAYGTIYPGPIGKII-------SPHLLGLESTSDLVTASS 367 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + +++ Sbjct: 368 LCGACGEVCPVRIPIPDLLQRLRREA 393 >gi|52424975|ref|YP_088112.1| electron transport complex protein RnfC [Mannheimia succiniciproducens MBEL55E] gi|81691415|sp|Q65U33|RNFC_MANSM RecName: Full=Electron transport complex protein rnfC; AltName: Full=Nitrogen fixation protein rnfC gi|52307027|gb|AAU37527.1| NqrA protein [Mannheimia succiniciproducens MBEL55E] Length = 723 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP + Y W S D + E + L C Sbjct: 378 CIRCSACSDACPVHLMPQQLY-----------WYARSEDHEKSE-------EYSLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGLCAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|260773917|ref|ZP_05882832.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio metschnikovii CIP 69.14] gi|260610878|gb|EEX36082.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Vibrio metschnikovii CIP 69.14] Length = 408 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 28/105 (26%), Gaps = 10/105 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + K +C+ C C+ CP N Y GP D + Sbjct: 1 MNHSFIANAPKNTSFDQCIKCTVCTVYCPVAKANP-LYPGPKQC---------GPDGERL 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C C +CP G+ IA + + Sbjct: 51 RIKSAEYYDDLLKLCTNCKRCETACPSGVRIGDLIAVARGKYGKK 95 >gi|89073950|ref|ZP_01160456.1| putative electron transport protein ykgF [Photobacterium sp. SKA34] gi|89050278|gb|EAR55782.1| putative electron transport protein ykgF [Photobacterium sp. SKA34] Length = 470 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C +CP+Y + G L + D C Sbjct: 312 RCIRCAACVNTCPAYRHIGGQSYGSIYSGPIGAVLS-PLLGGYEDFKDLPN------ACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + ++ + KI Sbjct: 365 LCRACHDVCPVKIPLSDLLLKHRQIMGEEKI 395 >gi|225387471|ref|ZP_03757235.1| hypothetical protein CLOSTASPAR_01224 [Clostridium asparagiforme DSM 15981] gi|225046401|gb|EEG56647.1| hypothetical protein CLOSTASPAR_01224 [Clostridium asparagiforme DSM 15981] Length = 321 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 8/96 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L +C+ C C CP+ N + A + D+ F+ + + Sbjct: 196 AFWQGELSKCIRCNACRNVCPACSCNKCVFDSDR-FDTAQKANADT---FEEQMFHLIRA 251 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C++ CP+G+ + L+ Sbjct: 252 FHVAGRCTDCGECSRVCPQGIPL----HLLNRKLIK 283 >gi|120553306|ref|YP_957657.1| iron-sulfur cluster binding protein [Marinobacter aquaeolei VT8] gi|120323155|gb|ABM17470.1| iron-sulfur cluster binding protein [Marinobacter aquaeolei VT8] Length = 480 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + L + D Sbjct: 316 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKIITPHMVG----------LHKVPDHPS 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + + + +++ + Sbjct: 366 ASS--LCGACGEVCPVKIPIPEMLQRLRQENVK 396 >gi|148926099|ref|ZP_01809785.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845578|gb|EDK22670.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 433 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 28/98 (28%), Gaps = 6/98 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C C C + N D P L + E E Sbjct: 12 KMKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKV-- 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 70 ----FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 103 >gi|303325547|ref|ZP_07355990.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] gi|302863463|gb|EFL86394.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] Length = 717 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 13/107 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQ 211 ++ CV C C+ CP + Y+ + + +D+ + Sbjct: 299 RTEIAKDPLFSQIFRCVRCGACANVCPVFRLVGGHKMGYIYIGAIGLILTYFFHGKDKAK 358 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C C G++ + I +I+ + + + Sbjct: 359 VL----------CQNCVGCESCANVCAGGIDLPRLIREIRSRVTEEQ 395 >gi|269955691|ref|YP_003325480.1| iron-sulfur cluster binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304372|gb|ACZ29922.1| iron-sulfur cluster binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 510 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 8/94 (8%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + S G R N P Sbjct: 337 HCIRCSACLNVCPVYEQVGGHAYGSVYPGPIGAILTPQLTGPSGTAGGGHRDPNAALP-- 394 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C CP ++ + +++ +D Sbjct: 395 -FASTLCGACYDVCPVRIDIPSILVELRAREVDA 427 >gi|284162650|ref|YP_003401273.1| Heterodisulfide reductase subunit C-like protein [Archaeoglobus profundus DSM 5631] gi|294862441|sp|P84621|HDLC_ARCPA RecName: Full=Heterodisulfide reductase subunit C-like protein gi|284012647|gb|ADB58600.1| Heterodisulfide reductase subunit C-like protein [Archaeoglobus profundus DSM 5631] Length = 188 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C++ CP + Y ++ RDE L D + Sbjct: 40 RLMYCMQCGACASICPLARVGFEWY----NKKLIKALILGLRDE--------LLDDPTPW 87 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CT+ CP+ ++P + + ++ ++ + Sbjct: 88 ACVACNRCTEICPRRVSPFEVMFAMRRLMAEE 119 >gi|15806509|ref|NP_295220.1| NADH dehydrogenase I subunit I [Deinococcus radiodurans R1] gi|81789326|sp|Q9RU95|NUOI_DEIRA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|6459254|gb|AAF11060.1|AE001993_10 NADH dehydrogenase I, I subunit [Deinococcus radiodurans R1] Length = 178 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 15/123 (12%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + K + V + + + ++ + + +P R GL +C+ C+ C+ Sbjct: 4 LDIAKGMGVTLGKLFQKPLTVSYPEQRATLQPRFRGRHVL-TRHPDTGLEKCIGCSLCAA 62 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+Y + D RD GER + + L RC C ++C Sbjct: 63 ACPAYAIYVEAA------------ENDPRDPVSPGERYAKVYEINML-RCIFCGLCEEAC 109 Query: 238 PKG 240 P G Sbjct: 110 PTG 112 >gi|323702355|ref|ZP_08114020.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532661|gb|EGB22535.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] Length = 431 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP + +S ++ R +++ + GE L C Sbjct: 18 KCIRCGACQVVCPIFKESSIESHTARGKVRLIRAVLEDKLNLSGEF------EDLLSHCL 71 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C Q CP G+ + + + ++ K Sbjct: 72 LCRACVQICPAGVKTDELVQATRSQVVAEK 101 >gi|170690439|ref|ZP_02881606.1| protein of unknown function DUF162 [Burkholderia graminis C4D1M] gi|170144874|gb|EDT13035.1| protein of unknown function DUF162 [Burkholderia graminis C4D1M] Length = 463 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + +C+ C C +CP Y + G Sbjct: 268 YTSHFRAPRPGTEMHYILVDHGRSERLAMDDFWYSLKCIRCGACMNTCPVYRRSGGLSYG 327 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 328 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRT 379 Query: 253 MLLDR 257 ++ +R Sbjct: 380 VIAER 384 >gi|304316325|ref|YP_003851470.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777827|gb|ADL68386.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 441 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K +L EDR + C+ CA C +CP Sbjct: 334 MMGIAQYSIDVPVIKGTSGILVLPEDRIALKDPKPCIKCARCVDACPMNLLP-------- 385 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + AY D + E L+ C +C+ CP ++I K + Sbjct: 386 LFISAYSLKN---DFNKCEEYHALD-------CIECGSCSYVCPSKRPLVESIRLAKREI 435 Query: 255 LDRK 258 L ++ Sbjct: 436 LRKR 439 >gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative [Francisella tularensis subsp. holarctica FSC200] Length = 436 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDP 221 +C+ C C + CPS + L P L Y+ ++ D+ + + Sbjct: 38 DKQADKCLECGFCESVCPSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQY 93 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP +N I ++ I Sbjct: 94 HGIDTCAATGLCGVQCPVDINTGSFIKDLRAEQNKANI 131 >gi|171184881|ref|YP_001793800.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934093|gb|ACB39354.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 431 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 15/108 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--------DEFQGERLD 216 CV CA C+ SCP ++ D P + R ++ +R G R+ Sbjct: 13 HYFENCVGCAACAPSCPYFYV--DERYSPVEKAEFLREMLRARYTLSGRLFGRLVGARMP 70 Query: 217 NLEDPFR-----LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ED YRC +C +CP G++ + +K L + Sbjct: 71 KSEDEMWKILEFAYRCTNCGHCYVTCPFGIDSGAMVRLLKQTLYSAGV 118 >gi|163758382|ref|ZP_02165470.1| iron-sulfur cluster binding protein [Hoeflea phototrophica DFL-43] gi|162284671|gb|EDQ34954.1| iron-sulfur cluster binding protein [Hoeflea phototrophica DFL-43] Length = 483 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 27/99 (27%), Gaps = 13/99 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP Y G P + ++ DE L N Sbjct: 308 YQDMLRCIRCGACMNHCPVYHAVGGHAYGSVYPGPMGAVLTPSLNGIDETGQ--LPNAS- 364 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + K + + +R + Sbjct: 365 -------TFCGRCESVCPMRIPLPKMMRHWREREFERNL 396 >gi|330807456|ref|YP_004351918.1| hypothetical protein PSEBR_a752 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375564|gb|AEA66914.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 485 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + + P Sbjct: 318 NCIRCGACMNHCPVYTRIGGHAYGEVYPGPIGKII------------TPHMVGLAKVPDH 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 366 PSASSLCGACGEVCPVKIPIPALLRRLREENVKA 399 >gi|239623488|ref|ZP_04666519.1| electron transport complex [Clostridiales bacterium 1_7_47_FAA] gi|239521519|gb|EEQ61385.1| electron transport complex [Clostridiales bacterium 1_7_47FAA] Length = 441 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 20/103 (19%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE-FQGERL 215 +D+ C+ C C + CPS+ + P +++QA RD+ E+L Sbjct: 354 FTKDQVAEMEPSACIRCGKCVSVCPSH-------IIPVMMMQAAL-----RDDCDTFEKL 401 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +E C +CT CP +A +++ + + Sbjct: 402 NGME-------CMECGSCTYVCPAKRPLTQAFKEMRKTVAANR 437 >gi|145299276|ref|YP_001142117.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Aeromonas salmonicida subsp. salmonicida A449] gi|142852048|gb|ABO90369.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Aeromonas salmonicida subsp. salmonicida A449] Length = 400 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 18/94 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---- 217 +C+ C C+ CP N Y GP GERL Sbjct: 5 HANQTFDQCIKCTVCTAYCPVAKANP-AYPGPKQA------------GPDGERLRIKSPE 51 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L D L C C +CP G+ IAK K Sbjct: 52 LFDS-ALKYCTNCKRCEVACPSGVRIGDIIAKAK 84 >gi|323974523|gb|EGB69649.1| iron-sulfur cluster-binding protein [Escherichia coli TW10509] Length = 471 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 55/223 (24%), Gaps = 23/223 (10%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIREKIRQDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + Sbjct: 239 MGMERIAPTFQEVDVLITMLARSAVGARLTGYNTWLTGPREEGHVDGPEEFHLVIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 S + + C+ C C +CP+Y G + + D Sbjct: 299 SEILGSEFSDVLRCIRCGACINTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYEDFKD 357 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + A I K + ++ + +I Sbjct: 358 LP------YACSLCTACNGVCPVKIPLATLIQKHRQVMAESEI 394 >gi|254481381|ref|ZP_05094626.1| electron transport complex, RnfABCDGE type, C subunit subfamily, putative [marine gamma proteobacterium HTCC2148] gi|214038544|gb|EEB79206.1| electron transport complex, RnfABCDGE type, C subunit subfamily, putative [marine gamma proteobacterium HTCC2148] Length = 677 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 18/118 (15%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + L + + C+ C C+ +CP+ + Sbjct: 338 VPDAHVPIVKTTNCVLAPAETELPAPPPAQACIRCGMCAEACPASLLPQQLF-------- 389 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 W ++ + E L+ C C+ CP + + K ++ Sbjct: 390 ---WFSQGKEFEKAE-------QHNLFDCIECGACSFVCPSNIPLVQYYRAAKAEVVQ 437 >gi|304315174|ref|YP_003850321.1| acetyl-CoA decarbonylase/synthase complex, alpha subunit [Methanothermobacter marburgensis str. Marburg] gi|302588633|gb|ADL59008.1| acetyl-CoA decarbonylase/synthase complex, alpha subunit [Methanothermobacter marburgensis str. Marburg] Length = 311 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 19/103 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + +D L C +C C+ CP A ++++ D+ + Sbjct: 48 PEKQKDIDLNSVLGYCELCGECNRVCP-----------------AMLPIMEAIDDAKNGG 90 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L + + C C + CP G+ I + + +R Sbjct: 91 LRAIGTLYE--SCSGCGRCMEVCPVGVPILDIIRESRGETPER 131 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + E+ +++ L C C + CP L +AI K Sbjct: 44 PSRKPEKQKDIDLNSVLGYCELCGECNRVCPAMLPIMEAIDDAKN 88 >gi|317154140|ref|YP_004122188.1| FAD linked oxidase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944391|gb|ADU63442.1| FAD linked oxidase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 1175 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-------DEFQGERLDNLEDPF 222 C C C CP Y P + LI+ E + L+D Sbjct: 729 CTRCGKCKQVCPMYQPVRGLMYHPRNKNISLGALIEGIYYSQIQSGEPSARLMAQLQDL- 787 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C CT CP ++ A A ++ L Sbjct: 788 -IDHCTACGKCTAVCPVKIDSAGAALSLRAFL 818 >gi|226940149|ref|YP_002795222.1| electron transport complex protein RnfC [Laribacter hongkongensis HLHK9] gi|226715075|gb|ACO74213.1| electron transport complex protein RnfC [Laribacter hongkongensis HLHK9] Length = 620 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 18/85 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C C+ +CP+ D Y W SR + + Sbjct: 354 FPPRPAALPCIRCGECAKACPTDLQPMDLY-----------WFAKSRQTGRAQ------- 395 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C+ CP + Sbjct: 396 EHHLFDCIECGACSYVCPSQIPLVD 420 Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 8/20 (40%) Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C ++CP L P Sbjct: 363 CIRCGECAKACPTDLQPMDL 382 >gi|70734310|ref|YP_257950.1| iron-sulfur cluster binding protein [Pseudomonas fluorescens Pf-5] gi|68348609|gb|AAY96215.1| iron-sulfur cluster binding protein [Pseudomonas fluorescens Pf-5] Length = 484 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + + P Sbjct: 318 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKII------------TPHMVGLAKVPDH 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 366 PSASSLCGACGEVCPVKIPIPALLRRLREENVKA 399 >gi|77456978|ref|YP_346483.1| Iron-sulfur cluster binding protein [Pseudomonas fluorescens Pf0-1] gi|77380981|gb|ABA72494.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 484 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y + Y GP + + + P Sbjct: 318 NCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKII------------TPHMVGLAKVPDH 365 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + +++ + Sbjct: 366 PSASSLCGACGEVCPVKIPIPALLRRLREENVKA 399 >gi|226357865|ref|YP_002787605.1| hypothetical protein Deide_3p01580 [Deinococcus deserti VCD115] gi|226320108|gb|ACO48101.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 500 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 21/98 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + L +LED Sbjct: 312 RCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAILTPQLL-------------HLEDKHA 358 Query: 224 ---LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CP +N + + ++ + D K Sbjct: 359 NTLPWASTLCGACYDACPVKINIPEVLLYLRGKITDDK 396 >gi|89895232|ref|YP_518719.1| hypothetical protein DSY2486 [Desulfitobacterium hafniense Y51] gi|219669664|ref|YP_002460099.1| hypothetical protein Dhaf_3646 [Desulfitobacterium hafniense DCB-2] gi|89334680|dbj|BAE84275.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539924|gb|ACL21663.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 694 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 39/137 (28%), Gaps = 44/137 (32%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------- 212 + + CV C C CP+Y S ++L P ++Q R ++ + Sbjct: 268 WKTLFNTDACVKCGRCQDHCPAY--LSGKHLNPKQVIQDLRVHMEEVGKAYENYRKKHPT 325 Query: 213 ----------------------------------ERLDNLEDPFRLYRCHTIMNCTQSCP 238 E + + ++ C T +C + CP Sbjct: 326 TAVGGGAGLQETVAAAQGSTGQENLPGEEELGLPELIGQVISENDIWDCTTCRSCEEQCP 385 Query: 239 KGLNPAKAIAKIKMMLL 255 + ++ L+ Sbjct: 386 IFVEHVDKTVAMRRNLV 402 >gi|218692554|ref|YP_002400766.1| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli ED1a] gi|218430118|emb|CAR11118.2| putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli ED1a] Length = 471 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 60/230 (26%), Gaps = 37/230 (16%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC--GSCGMNIDGTNTLACVKDMKDIKGA 110 + M L I+ C + GS + + N C K Sbjct: 179 ETPEAMTLFIREKIRQDFLSAEVGVTGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAV 238 Query: 111 I---AVYP-----------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + P L +V L + + + Sbjct: 239 MGMERIAPTFQEVDVLITMLARSAVGARLTGYNTWLTGPREEGHVDGPEEFHLIIVDNGR 298 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-----YLGP--AILLQAYRWLIDSRDE 209 S + + C+ C C +CP+Y Y GP A++ D RD Sbjct: 299 SEILGSEFSDVLRCIRCGACINTCPAYRQIGGHGYGSIYPGPIGAVISPLLGGYEDFRDL 358 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + A I K + ++ + +I Sbjct: 359 P--------------YACSLCTACNGVCPVKIPLATLIQKHRQVMAESEI 394 >gi|254410413|ref|ZP_05024192.1| hypothetical protein MC7420_2928 [Microcoleus chthonoplastes PCC 7420] gi|196182619|gb|EDX77604.1| hypothetical protein MC7420_2928 [Microcoleus chthonoplastes PCC 7420] Length = 194 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C+ C CS C + + P L+ Q + + L+ Sbjct: 40 IASCMQCGTCSGGCTNIDRMD---ISPRKLILLL----------QRGEWETILKSNTLWL 86 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CP+G+ PA I +K + + I Sbjct: 87 CTSCYTCTSRCPRGVRPADVIEAVKALAIREGI 119 >gi|253699949|ref|YP_003021138.1| hypothetical protein GM21_1320 [Geobacter sp. M21] gi|251774799|gb|ACT17380.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 413 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CP+Y P + R L + + L+ + Sbjct: 1 MDYVKLINCMRCGMCLPHCPTYKETFLETASPRGRVALVRKLQEGELVESEKFLEYVS-- 58 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+N + +A+ + Sbjct: 59 ----LCLDCQACASACPCGVNAGELVAEFR 84 >gi|59713431|ref|YP_206206.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Vibrio fischeri ES114] gi|59481679|gb|AAW87318.1| sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit GlpC [Vibrio fischeri ES114] Length = 423 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C+ CP N D Y GP L E+ E L Sbjct: 24 APANTSFDQCLKCTVCTVYCPVAKENPD-YPGPKQCGPDGERLRFKSPEYYDETLKL--- 79 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ IA + Sbjct: 80 ------CTNCKRCETACPSGVKIGDMIAVAR 104 >gi|329944923|ref|ZP_08292950.1| cysteine-rich domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328529734|gb|EGF56630.1| cysteine-rich domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 817 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 12/35 (34%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + + ++ + Sbjct: 466 ADVLWACTTCGACVDQCPVDIEHVDHVVDVRRQQV 500 >gi|326772948|ref|ZP_08232232.1| iron-sulfur cluster-binding protein [Actinomyces viscosus C505] gi|326637580|gb|EGE38482.1| iron-sulfur cluster-binding protein [Actinomyces viscosus C505] Length = 893 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 12/35 (34%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + + ++ + Sbjct: 496 ADVLWACTTCGACVDQCPVDIEHVDHVVDVRRQQV 530 >gi|319649837|ref|ZP_08003988.1| iron-sulfur cluster binding protein [Bacillus sp. 2_A_57_CT2] gi|317398417|gb|EFV79104.1| iron-sulfur cluster binding protein [Bacillus sp. 2_A_57_CT2] Length = 476 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 17/99 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C+ CA C CP Y Y GP + L+ D+++ Sbjct: 307 FHSILQCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDYKEL----- 359 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + +++++ Sbjct: 360 -----PYASTLCGACTEACPVKIPLHELLHKHRQVIVEK 393 >gi|313673795|ref|YP_004051906.1| fad linked oxidase domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940551|gb|ADR19743.1| FAD linked oxidase domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 944 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS------CPSYWWN 186 Y +++ S + LL+ +E+ I + +C C+ C+T CP Y + Sbjct: 511 YQVLKNLRYGEDYKSSTVIQPLLKWNEE--FISEVEKCHGCSKCTTVTTATRMCPIYKFT 568 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 D P R+LI E + + + C +C + CP +N K Sbjct: 569 RDEAAAPKAKANILRYLISG--EIDDSSIYESAFQYVIDHCVNCGSCYKECPSNVNIPKL 626 Query: 247 IAKIKMMLLDR 257 + + + Sbjct: 627 AIEARSQYAKK 637 >gi|294632648|ref|ZP_06711208.1| iron-sulfur cluster-binding protein [Streptomyces sp. e14] gi|292835981|gb|EFF94330.1| iron-sulfur cluster-binding protein [Streptomyces sp. e14] Length = 496 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 48/178 (26%), Gaps = 24/178 (13%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + G + P + V + S + W T Sbjct: 236 NGRMCLTLPDTLISVVGIEKILPTWRDLEVFLQTLPRSSTAERMNPYTSMWTGTTDGDGP 295 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 ++ D + D L C+ C+ C CP Y Y GP + Sbjct: 296 RDFHLVLLDNGRTDTLADDIGRQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI- 354 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R G D Y C CP ++ + + ++ ++ Sbjct: 355 ---LSPQLRGTHSG------IDASLPYASSLCGACYDVCPVAIDIPEVLVHLRERVVQ 403 >gi|268611223|ref|ZP_06144950.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Ruminococcus flavefaciens FD-1] Length = 323 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 8/97 (8%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L +C+ C C CP+ + P + + D F+ + Sbjct: 197 FWREQLSKCIRCNACRNVCPACSCEKCIFDNPDSGFENKAAV----DSFEENMFHIIRAF 252 Query: 222 FRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMML 254 RC C++ CP+ + K I I + Sbjct: 253 HVAGRCTDCGECSRVCPQNIPLHLLNRKFIKDINSLY 289 >gi|76666819|emb|CAJ31196.1| Quinone-interacting membrane-bound oxidoreductase complex subunit C (QmoC) [uncultured sulfate-reducing bacterium] Length = 389 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D ++C CA CS +C + D+ P + +W + + L +L+ Sbjct: 32 AHFGADTFHKCYQCATCSVACS---LSPDQDPFPRKQMLWAKWGL------KDRLLKDLD 82 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C+ NC+ CP+ P + + ++ L Sbjct: 83 ----VWTCYYCGNCSTRCPRNAEPGETMMALRRYL 113 >gi|127514064|ref|YP_001095261.1| FAD linked oxidase domain-containing protein [Shewanella loihica PV-4] gi|126639359|gb|ABO25002.1| FAD linked oxidase domain protein [Shewanella loihica PV-4] Length = 934 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C +CP+ N A L + R S D+ E + Sbjct: 536 DDFVDRCIECGFCEKTCPTSALNFTPRQRIATLREIARLEA-SGDKQAAEEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|15899836|ref|NP_344441.1| Iron-sulfur protein, putative [Sulfolobus solfataricus P2] gi|13816554|gb|AAK43231.1| Iron-sulfur protein, conserved putative [Sulfolobus solfataricus P2] Length = 384 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 20/91 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 300 CIRCGRCHFHCPVYRVLDGKWGDPPYSGPMGAMWSGIVYNDYKPALL------------- 346 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C NC + CP +N K + +K Sbjct: 347 --CSHAGNCREVCPMKINIPKVLEYLKNKYF 375 >gi|227874303|ref|ZP_03992490.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Oribacterium sinus F0268] gi|227839854|gb|EEJ50297.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Oribacterium sinus F0268] Length = 457 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L +D + C+ C C T+CP L P +++ A Sbjct: 354 TKNSSSILAFKKDPVAEEATTPCINCGRCVTACP-------ENLMPTLMMVASL------ 400 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ER + L C C+ CP + ++K + K Sbjct: 401 -QKNTERFEKLYGME----CIECGCCSYVCPAKRPLTQGFKQMKRKVNAEK 446 >gi|226327370|ref|ZP_03802888.1| hypothetical protein PROPEN_01240 [Proteus penneri ATCC 35198] gi|225203896|gb|EEG86250.1| hypothetical protein PROPEN_01240 [Proteus penneri ATCC 35198] Length = 476 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y + G L ++ NL Y C Sbjct: 311 RCIRCGACMNTCPAYRHIGGQGYGSIYPGPVGAVLTPLLGGYKD--FKNLP-----YVCS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + I K + +++ KI Sbjct: 364 LCTACDSVCPVKIPLSNLIKKHRDVMVKEKI 394 >gi|152995571|ref|YP_001340406.1| RnfABCDGE type electron transport complex subunit C [Marinomonas sp. MWYL1] gi|150836495|gb|ABR70471.1| electron transport complex, RnfABCDGE type, C subunit [Marinomonas sp. MWYL1] Length = 981 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 52/198 (26%), Gaps = 41/198 (20%) Query: 82 EGICGSCGMNID----GTNTLACVKDMKDI--KGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 G+C D G ++ + K V L V L S Sbjct: 269 CQNVGTCVAVHDAITQGKPLISRFTTLTGDALKSPQNVEVLLGTPVEHLLEYADSEPKKL 328 Query: 136 HRSIEPWLKTVSP----------KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 R I L S ++ C+ C C +CP+ Sbjct: 329 SRLIMGGPMMGYTLDSAAVPIVKTSNCILAASKKELPPPAPEQACIRCGMCEQACPA--- 385 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 ++L Q W S++ + E L+ C C+ CP + + Sbjct: 386 --------SLLPQQLLWFSKSQEFEKAEH-------HNLFDCIECGACSYVCPSSIPLVQ 430 Query: 246 -------AIAKIKMMLLD 256 +I + + + Sbjct: 431 YYRHTKSSIREAREANVK 448 >gi|146304306|ref|YP_001191622.1| heterodisulfide reductase subunit C-like protein [Metallosphaera sedula DSM 5348] gi|145702556|gb|ABP95698.1| Heterodisulfide reductase subunit C-like protein [Metallosphaera sedula DSM 5348] Length = 230 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C + Y + A + S E Q ++R Sbjct: 60 ISLCWQCGTCTSGC-TMREYDPNYSPRRFIDLARKGDKQSLIELQ----------DSIWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I LL + Sbjct: 109 CVSCQKCTHRCPKGVLVEEVVHSIHNYLLKHGL 141 >gi|163845780|ref|YP_001633824.1| hypothetical protein Caur_0181 [Chloroflexus aurantiacus J-10-fl] gi|222523487|ref|YP_002567957.1| hypothetical protein Chy400_0193 [Chloroflexus sp. Y-400-fl] gi|163667069|gb|ABY33435.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aurantiacus J-10-fl] gi|222447366|gb|ACM51632.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus sp. Y-400-fl] Length = 511 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 12/111 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID------SRDEF---- 210 + + L C+ C C +C Y D L P R + R Sbjct: 18 AEDVVNLEACMDCKMCGEACAWYLVTGDEKLHPTYKTGLIRQIYHRYMTVEGRIGGALGL 77 Query: 211 --QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D E + C CT +CP G++ + + + D + Sbjct: 78 VPTPTVADLREHMQYFWACTACGRCTLACPSGISIRRIVRLARAAYADSGL 128 >gi|256371752|ref|YP_003109576.1| hypothetical protein Afer_0964 [Acidimicrobium ferrooxidans DSM 10331] gi|256008336|gb|ACU53903.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM 10331] Length = 239 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 12/127 (9%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + + + + ED + LY C C C +CPS + Sbjct: 9 YLKRSDATGYGEVDRATKERLIGEVFEDPRFPHYLYGCYECGICVAACPSARFYDFSPRR 68 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A + L + ++ C +C CP+G NP + ++ Sbjct: 69 IAQAAA-----------RRDVELLYQQLEEDVWECSQCFSC-LRCPRGNNPGGIVTIMRE 116 Query: 253 MLLDRKI 259 + + + Sbjct: 117 VAVREGL 123 >gi|325263473|ref|ZP_08130207.1| putative 4Fe-4S binding domain protein [Clostridium sp. D5] gi|324031182|gb|EGB92463.1| putative 4Fe-4S binding domain protein [Clostridium sp. D5] Length = 349 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 10/90 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ECV C+ C CP+ + + G R D Sbjct: 8 YYNSVECVRCSLCLDRCPAVRAAGTDKAPMYSSVYSAL----------GSRFDLEMVTEE 57 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++C C +CP + A +A I+ + Sbjct: 58 AFQCIDCYECESACPVNVPIADTMAYIRRL 87 >gi|212704669|ref|ZP_03312797.1| hypothetical protein DESPIG_02732 [Desulfovibrio piger ATCC 29098] gi|212671903|gb|EEB32386.1| hypothetical protein DESPIG_02732 [Desulfovibrio piger ATCC 29098] Length = 482 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 8/94 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP W+ + + Sbjct: 358 AFWRGQMERCLRCYACRNACPMCVCRDYCVAESRDPH----WMTQEDSVREKLYFQTIHA 413 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP G+ I ++ + Sbjct: 414 LHLAGRCTGCGECQRACPVGIP----ILALRQQI 443 >gi|153002888|ref|YP_001377213.1| hypothetical protein Anae109_0009 [Anaeromyxobacter sp. Fw109-5] gi|152026461|gb|ABS24229.1| protein of unknown function DUF224 cysteine-rich region domain protein [Anaeromyxobacter sp. Fw109-5] Length = 678 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 18/112 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------- 205 ++ +Y C C C T CP+Y + L+D Sbjct: 267 WKEAWDVYSCTECGRCQTHCPTY-VTGKPLSHKEVNRTIRHHLLDVAPALAAAARAKEPA 325 Query: 206 SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R+ G + ++ P + C T C +CP + + ++ + Sbjct: 326 AREAALGALPPIASVVPPETFWACTTCGWCETACPVLIENVPRLVDMRRQQV 377 >gi|330834549|ref|YP_004409277.1| heterodisulfide reductase (HdrC1-like protein) [Metallosphaera cuprina Ar-4] gi|329566688|gb|AEB94793.1| heterodisulfide reductase (HdrC1-like protein) [Metallosphaera cuprina Ar-4] Length = 230 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C C C++ C + Y + A + S E Q ++R Sbjct: 60 ISLCWQCGTCTSGC-TMREYDPNYSPRRFIDLARKGDKQSLIELQ----------DSIWR 108 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CT CPKG+ + + I LL + Sbjct: 109 CVSCQKCTHRCPKGVLVEEVVHSIHNYLLKHGL 141 >gi|323701543|ref|ZP_08113216.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfotomaculum nigrificans DSM 574] gi|323533552|gb|EGB23418.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfotomaculum nigrificans DSM 574] Length = 400 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 12/98 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L C+ C+ C T+CP D++ GP + + + RL+ Sbjct: 3 QYDNLALDNCIKCSICVTNCPVTRVT-DKFAGPK----------QNGPDLERFRLEEPAA 51 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C NC +CP G++ A +K K + R Sbjct: 52 VHPSIGYCSNCKNCDVACPSGVSIATMNSKAKGEFVAR 89 >gi|271499893|ref|YP_003332918.1| iron-sulfur cluster-binding protein [Dickeya dadantii Ech586] gi|270343448|gb|ACZ76213.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech586] Length = 475 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G L S E NL Y C Sbjct: 311 RCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVL--SPLLGGYEDFKNLP-----YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + I + + L + + Sbjct: 364 LCTACDDVCPVRIPLSSLIVQHRRTLAENGM 394 >gi|55377428|ref|YP_135278.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haloarcula marismortui ATCC 43049] gi|55230153|gb|AAV45572.1| glycerol-3-phosphate dehydrogenase chain C [Haloarcula marismortui ATCC 43049] Length = 458 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 9/120 (7%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 T ++ +D G C C+ C T+CP + D + GP Sbjct: 14 PVAPNTGEEFEPVDVFPDSDDFDLRPGADSCFKCSTCDTNCPVAEVDDD-FPGPKFQGPE 72 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L S D+ E + C M C +CP G+ ++ + + ++ Sbjct: 73 QWRLKQSDDDH--------EIDDSVMDCSNCMRCDNACPSGVPLSQMHNTARGEYVSEQM 124 >gi|294494833|ref|YP_003541326.1| hypothetical protein Mmah_0146 [Methanohalophilus mahii DSM 5219] gi|292665832|gb|ADE35681.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methanohalophilus mahii DSM 5219] Length = 367 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 7/98 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + + C+ C C CP+ P + + ++ +E + +DN Sbjct: 2 YRFQEKIDSCIDCKKCWEVCPANMVTEGNLFTPQRKIGSLAKIVAG-EELTQDEMDN--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +Y C CP + I + +L + Sbjct: 58 ---IYLSTRCGACDDVCPVDIPITDIIQYERELLAQQG 92 >gi|284174092|ref|ZP_06388061.1| Iron-sulfur protein, putative [Sulfolobus solfataricus 98/2] gi|261601513|gb|ACX91116.1| protein of unknown function DUF162 [Sulfolobus solfataricus 98/2] Length = 383 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 20/91 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRVLDGKWGDPPYSGPMGAMWSGIVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C NC + CP +N K + +K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKNKYF 374 >gi|220905363|ref|YP_002480675.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869662|gb|ACL49997.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 482 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 8/94 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +CP W+ + + Sbjct: 358 AFWRGQMERCLRCYACRNACPMCVCRDFCVSDSRDPH----WMTQEDSVKEKLFFQTIHA 413 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP G+ I ++ + Sbjct: 414 MHLAGRCTGCGECQRACPVGIP----ILALRQQI 443 >gi|120603763|ref|YP_968163.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio vulgaris DP4] gi|120563992|gb|ABM29736.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio vulgaris DP4] Length = 941 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPF 222 + +C+ C C CPS P + +R + D + RL L + Sbjct: 536 HSIIDKCIECGFCEPVCPSRNVT----FTPRQRIVGWREIRRMEDGAEKSRLLRELFSGY 591 Query: 223 RL---YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C CP G+N I +++ Sbjct: 592 GYLGDDTCATDGLCATRCPVGINTGSFIKELR 623 >gi|90022046|ref|YP_527873.1| electron transport complex protein RnfC [Saccharophagus degradans 2-40] gi|89951646|gb|ABD81661.1| serine/threonine protein kinase [Saccharophagus degradans 2-40] Length = 745 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 18/105 (17%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + V L + ++ C+ C C+ +CP+ + Sbjct: 341 DFDVPVVKTTNCILAPTQKELPLAPPAQACIRCGMCAEACPASLLPQQLF---------- 390 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 W + D +RL L+ C C+ CP + + Sbjct: 391 -WYSQAEDH---DRLKA----HNLFDCIECGACSYVCPSNIPLVQ 427 >gi|22204175|emb|CAC86886.1| membrane-bound NiFe hydrogenase [Acidianus ambivalens] Length = 454 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 16/114 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + L CV C C +CP + + P + R L R G+ + + Sbjct: 27 DSTILYYLQSCVNCKACEAACPFTPTSLE--YSPVNKAEIARQLYRPRFTIWGKTIGRVI 84 Query: 220 D--------------PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP ++ I ++ + + Sbjct: 85 GGSKKYLSLEEAETMADYAWHCTNCGACMFVCPMAIDSGALIDLLRQVTFKAGM 138 >gi|83644125|ref|YP_432560.1| FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396] gi|83632168|gb|ABC28135.1| FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396] Length = 946 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 1/117 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ P L + +C+ C C +CPS Sbjct: 507 KGILNPGVIINDDPEAHLRHLKPLPAADPLIDKCIECGFCEPACPSRELTLTPRQRIVAS 566 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R D Q + L + D C C SCP +N ++ Sbjct: 567 REIARLQASGEDAEQLQALVDAYDYAGDDTCAACGLCALSCPVSINTGDL-TRLHRK 622 >gi|197336943|ref|YP_002157839.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Vibrio fischeri MJ11] gi|197314195|gb|ACH63644.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Vibrio fischeri MJ11] Length = 423 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C+ CP N D Y GP L E+ E L Sbjct: 24 APANTSFDQCLKCTVCTVYCPVAKENPD-YPGPKQCGPDGERLRFKSPEYYDETLKL--- 79 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ IA + Sbjct: 80 ------CTNCKRCETACPSGVKIGDMIAVAR 104 >gi|320534457|ref|ZP_08034931.1| cysteine-rich domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133328|gb|EFW25802.1| cysteine-rich domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 241 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 12/35 (34%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + + ++ + Sbjct: 29 ADVLWACTTCGACVDQCPVDIEHVDHVVDVRRQQV 63 >gi|254369298|ref|ZP_04985310.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] gi|157122248|gb|EDO66388.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] Length = 240 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + +L +D + +C+ C C + C Sbjct: 3 DELYKVMQEIKLLLDPHNLLNPGVILNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 62 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS + L P L Y+ ++ D+ + + + C C CP Sbjct: 63 PSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQYHGIDTCAATGLCGVQCP 118 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 119 VDINTGSFIKDLRAEQNKANI 139 >gi|332879630|ref|ZP_08447325.1| putative iron-sulfur cluster-binding protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682596|gb|EGJ55498.1| putative iron-sulfur cluster-binding protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 461 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 28/180 (15%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDL---------VVDMSHFYSQHR 137 C + +C K G + P + + V L + + Y R Sbjct: 215 CTNEGNADMGTSCPKLNIAAFGLEKIVPDMKALGVFTRLLARSGTGQPITTYTSHYRTPR 274 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---RYLGPA 194 + + +L + C+ C C +CP Y + Y P Sbjct: 275 EGGEYHIIIVDNGRSRILSHPD----HIRTLNCIRCGACMNTCPVYRHSGGYSYTYFIPG 330 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D + DNL C ++C+ CP ++ + I + + L Sbjct: 331 PIGINLGMAHDP-----SKYYDNLS------ACSLCLSCSNVCPAKVDLGEQIYRWRQTL 379 >gi|254283952|ref|ZP_04958920.1| serine/threonine protein kinase [gamma proteobacterium NOR51-B] gi|219680155|gb|EED36504.1| serine/threonine protein kinase [gamma proteobacterium NOR51-B] Length = 510 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 25/113 (22%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L + ++ C+ C C+ +CP+ Y DS Sbjct: 352 NCILAPTEQELPTPAPAQPCIRCGMCAEACPAELLPQQLYWFARAKD------NDSL--- 402 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLD 256 + L+ C C+ CP + + AI + + + Sbjct: 403 ---------EQHNLFDCIECGACSWVCPSQIPLVQYYRAGKAAINEARQEKVR 446 >gi|197286870|ref|YP_002152742.1| iron-sulfur cluster-binding protein [Proteus mirabilis HI4320] gi|227354945|ref|ZP_03839357.1| iron-sulfur electron transport protein [Proteus mirabilis ATCC 29906] gi|194684357|emb|CAR45986.1| putative iron-sulfur cluster-binding protein [Proteus mirabilis HI4320] gi|227164962|gb|EEI49806.1| iron-sulfur electron transport protein [Proteus mirabilis ATCC 29906] Length = 472 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 17/96 (17%) Query: 169 ECVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP+Y + Y GP + + + + Sbjct: 311 RCIRCGACMNTCPAYRHIGGQGYDSIYPGPVGAV------LTPLLGGYKDFKNLP----- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + + I K + +++++ I Sbjct: 360 -YVCSLCTACDSVCPVKIPLSNLIKKHREVMVEQGI 394 >gi|58699762|ref|ZP_00374406.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533723|gb|EAL58078.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 37 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/33 (69%), Positives = 31/33 (93%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 YRCH IMNCT++CPKGLNPA+AIAK+K ++++R Sbjct: 2 YRCHAIMNCTKTCPKGLNPARAIAKVKQLMVER 34 >gi|256423902|ref|YP_003124555.1| hypothetical protein Cpin_4921 [Chitinophaga pinensis DSM 2588] gi|256038810|gb|ACU62354.1| protein of unknown function DUF162 [Chitinophaga pinensis DSM 2588] Length = 457 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ +C+ C C +CP Y + AI L + D L Sbjct: 297 REDFRNSLKCIRCGACMNTCPVYRRSGGHSYHNAIAGPIGSILAPNLDMKDYADLP---- 352 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +C+ CP ++ + + K + ++ Sbjct: 353 ----FASTLCGSCSNVCPVKIDIHQQLYKWRQVITKEG 386 >gi|302349195|ref|YP_003816833.1| Putative sulfur reductase catalytic hydrophilic subunit, fused PsrA-PsrB-like protein [Acidilobus saccharovorans 345-15] gi|302329607|gb|ADL19802.1| Putative sulfur reductase catalytic hydrophilic subunit, fused PsrA-PsrB-like protein [Acidilobus saccharovorans 345-15] Length = 886 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 56/204 (27%), Gaps = 31/204 (15%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+ + G + L L P+L R +G C C + ++G +C ++D Sbjct: 10 VEHEVDGNLSLLEALRRLGYYVPSLCYDDRLGPQGSCRLCVVEVNGRLVTSCTTKVQD-G 68 Query: 109 GAIAVYPLPHMSVIKDLV----------VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 + V ++++ + + + ++ L Sbjct: 69 MEVRTDSEQVNQVRREVLRLLARSYPRDAYARYPFKEFHVAMSKYGVEPQGTERQDLVDL 128 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLD 216 + + C+ C C +C Y + R + D D Sbjct: 129 SHPYIVVDMNRCIKCFRCVKACDEVQ----GYHVWRAWGRGGRIMIRPDGPDFAHS---- 180 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 C + C CP G Sbjct: 181 ---------SCVSCGLCVDVCPTG 195 >gi|294495310|ref|YP_003541803.1| CoB-CoM heterodisulfide reductase, subunit D [Methanohalophilus mahii DSM 5219] gi|292666309|gb|ADE36158.1| CoB-CoM heterodisulfide reductase, subunit D [Methanohalophilus mahii DSM 5219] Length = 418 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 9/107 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAY------RWLIDSRDEFQGE 213 ++ + C C C CP+Y + D L P + + + + +R + Sbjct: 15 AVQLMEIDSCTRCGECVEWCPTYDASGKDPGLAPRDKILRWQEYMKKSYGLRARLFGPKQ 74 Query: 214 RLDNLEDPFR--LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D F+ +Y C T C C G+N + ++ L+ R Sbjct: 75 VPEEEIDQFKEDVYGCTTCAMCATVCESGINTVELWEAMRANLVKRG 121 >gi|260428467|ref|ZP_05782446.1| FAD linked oxidase, C- domain protein [Citreicella sp. SE45] gi|260422959|gb|EEX16210.1| FAD linked oxidase, C- domain protein [Citreicella sp. SE45] Length = 946 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 32/113 (28%), Gaps = 8/113 (7%) Query: 142 WLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCST------SCPSYWWNSDRYLGPA 194 W P + Q + R + C C CPSY DR P Sbjct: 527 WKIDEVPMRGQMDRQVPQALRDANTSAFACNGNGACFNRDPRDVMCPSYKATGDRRHSPK 586 Query: 195 ILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R WL E + + E + C + C CP ++ K Sbjct: 587 GRASLMREWLRQGGPEGKADADFEAEVKEAMDGCLSCAACATQCPIRVDVPKL 639 >gi|261343671|ref|ZP_05971316.1| electron transport complex protein RnfC [Providencia rustigianii DSM 4541] gi|282568054|gb|EFB73589.1| electron transport complex protein RnfC [Providencia rustigianii DSM 4541] Length = 779 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 18/96 (18%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L+ + E+ K C+ C C +CP+ Y D ++ Sbjct: 358 CNCLLVPTMEEMGKKPIEEACIRCGLCVDACPAGLLPQQLYWFSKG---------DEHEK 408 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 Q L+ C C CP + + Sbjct: 409 AQK---------HNLFDCIECGACAYVCPSNIPLVQ 435 >gi|288560073|ref|YP_003423559.1| CoB--CoM heterodisulfide reductase subunit C HdrC [Methanobrevibacter ruminantium M1] gi|288542783|gb|ADC46667.1| CoB--CoM heterodisulfide reductase subunit C HdrC [Methanobrevibacter ruminantium M1] Length = 358 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 13/91 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C CPS G + + + + E + L+ C Sbjct: 206 DHCFQCGTCGGGCPS---------GRRTPYRVRQIVRKCLLGLREE----VVSDPALWMC 252 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T C + CP+ + I + Sbjct: 253 TTCYTCQERCPRSVKIVDIIKMARNEAAKAG 283 >gi|226329408|ref|ZP_03804926.1| hypothetical protein PROPEN_03313 [Proteus penneri ATCC 35198] gi|225202594|gb|EEG84948.1| hypothetical protein PROPEN_03313 [Proteus penneri ATCC 35198] Length = 225 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 10/89 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C+T CP N Y GP D + D + Sbjct: 4 HDNSFEACIKCTVCTTYCPVAKVNP-LYPGPKQA---------GPDGERLRLKDPMLYDE 53 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + I++ K Sbjct: 54 ALKYCTNCKRCEVACPSDVKIGDIISRAK 82 >gi|255281007|ref|ZP_05345562.1| putative dehydrogenase, beta subunit [Bryantella formatexigens DSM 14469] gi|255268455|gb|EET61660.1| putative dehydrogenase, beta subunit [Bryantella formatexigens DSM 14469] Length = 328 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 8/105 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + L +C+ C C CP+ + + D F+ + Sbjct: 192 MSPQEKFAFFQKELSKCIRCNACRNVCPACSCRKCVFDSTKFDSSQKA----NADSFEEK 247 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMML 254 + RC C++ CP+G+ K I I + Sbjct: 248 MFHIIRAFHVAGRCTDCGECSRVCPQGIPLHLFNRKFIKDINELY 292 >gi|120601390|ref|YP_965790.1| hypothetical protein Dvul_0340 [Desulfovibrio vulgaris DP4] gi|120561619|gb|ABM27363.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfovibrio vulgaris DP4] Length = 717 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 13/106 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 ++ + + CV C C+ CP Y +G + + RD+ + Sbjct: 298 RRALAEDPLFSQVLRCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGRDKAR 357 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C +C C G++ + I +I+ L + Sbjct: 358 ----------NLVQNCINCESCKHICAGGIDLPRLIKEIRARLNEE 393 >gi|92112538|ref|YP_572466.1| FAD linked oxidase-like protein [Chromohalobacter salexigens DSM 3043] gi|91795628|gb|ABE57767.1| FAD linked oxidase-like protein [Chromohalobacter salexigens DSM 3043] Length = 961 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 4/93 (4%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RL 224 +C+ C C CPS I + R S + RL L D + + Sbjct: 539 DKCIECGFCEPVCPSRELTLTPRQRIVIQREMARLEA-SGGQEDASRLATLRDAYQYQGI 597 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C CP G+N + + + + Sbjct: 598 DTCAADGLCATQCPVGINTGDLVREWRHRQVAE 630 >gi|73538477|ref|YP_298844.1| formate dehydrogenase, alpha subunit [Ralstonia eutropha JMP134] gi|72121814|gb|AAZ64000.1| Formate dehydrogenase, alpha subunit [Ralstonia eutropha JMP134] Length = 937 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 25/171 (14%) Query: 81 REGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD----LVVDM-SHFYS 134 G C +C + I G LA + + + L DM Y+ Sbjct: 58 TAGNCRACMVEIQGERVLAPSCCRYPSQGMTVQTESERALRAQRTVLELLQSDMPETDYT 117 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG-----LYECVMCACCSTSCPSYWWNSDR 189 +H ++ W + + + L C+ C C +C N Sbjct: 118 RHNELDQWSARLDVGKPRFAPRERLAADLSHPAIAVNLDACIQCTRCVRACRDEQVND-- 175 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G A+ A R + D ++DP C C Q+CP G Sbjct: 176 VIGLALRGDAARIVFD------------MDDPLGASTCVACGECVQACPTG 214 >gi|16081648|ref|NP_394015.1| heterodisulfide reductase related protein [Thermoplasma acidophilum DSM 1728] gi|10639709|emb|CAC11681.1| heterodisulfide reductase related protein [Thermoplasma acidophilum] Length = 381 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 11/94 (11%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYL-GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +CV C C + CP+ G + ++L + ++ Sbjct: 7 EAGKCVNCGFCESVCPTLPAAGFISTKGARGRVDLAKFLYN---------KGEIDPSESF 57 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C CP G+N K ++I M++ + Sbjct: 58 YSCVDCYACLSVCPAGVNAGKV-SEIGRMIVAEQ 90 >gi|330834545|ref|YP_004409273.1| heterodisulfide reductase (HdrC2-like protein) [Metallosphaera cuprina Ar-4] gi|329566684|gb|AEB94789.1| heterodisulfide reductase (HdrC2-like protein) [Metallosphaera cuprina Ar-4] Length = 280 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 11/118 (9%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I K D + + L C+ C C++ CP+ + GP ++Q Sbjct: 35 ISNLSPQDRETAIKFWQAVKSDFRYDEYLRGCLNCGVCTSGCPAAKFYD---FGPREMIQ 91 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + D D+ +++ C C+ CP A I ++ + Sbjct: 92 --YMMRDEVDKIWE------FTNKKVWACVQCYTCSMRCPFNNEIAGLIMLLREYSVQ 141 >gi|300781749|ref|ZP_07091603.1| FAD linked oxidase domain protein [Corynebacterium genitalium ATCC 33030] gi|300533456|gb|EFK54517.1| FAD linked oxidase domain protein [Corynebacterium genitalium ATCC 33030] Length = 938 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + ++ + + + Q D + CV C C CPS + ++ Sbjct: 509 RGVMNPGVIITDDDREHMKNFKLNPQVEDEIDSCVECGYCEPVCPS-RDLTMTPRQRIVV 567 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +A I D + +D + C C +CP G++ K I ++ Sbjct: 568 RRARAKAIQEGDTELVKHIDAEYQYEGIDTCAVDSMCVTACPVGIDTGKFIKSLRR 623 >gi|254883804|ref|ZP_05256514.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643532|ref|ZP_07998155.1| electron transporter [Bacteroides sp. 3_1_40A] gi|254836597|gb|EET16906.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384937|gb|EFV65893.1| electron transporter [Bacteroides sp. 3_1_40A] Length = 455 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 8/86 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y + ++ G L + C Sbjct: 302 NCIRCGACMNTCPVYR--------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACS 353 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 +C+ CP ++ A+ I + L Sbjct: 354 LCYSCSFVCPAKVDLAEQIYLWRQDL 379 >gi|298529639|ref|ZP_07017042.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511075|gb|EFI34978.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 318 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + ++ C+ C C +CP + +WL D + + + + Sbjct: 196 QHWEREMHRCIRCYACRNACPMCVCRDHC----VAQSRQPQWLTQ-EDSVREKWMFQVIH 250 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L RC C ++CP + K+ + Sbjct: 251 AMHLAGRCVECGECQRACPMDIPIMALKRKLNREARE 287 >gi|150010001|ref|YP_001304744.1| oxidoreductase [Parabacteroides distasonis ATCC 8503] gi|149938425|gb|ABR45122.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Parabacteroides distasonis ATCC 8503] Length = 923 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L++ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKNAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|187920125|ref|YP_001889156.1| hypothetical protein Bphyt_5428 [Burkholderia phytofirmans PsJN] gi|187718563|gb|ACD19786.1| protein of unknown function DUF162 [Burkholderia phytofirmans PsJN] Length = 464 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + + +C+ C C +CP Y + G Sbjct: 269 YTSHFRAPRPGTEMHFILVDHGRSERLAMEDFWYSLKCIRCGACMNTCPVYRRSGGLSYG 328 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 329 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRT 380 Query: 253 MLLDR 257 ++ +R Sbjct: 381 VIAER 385 >gi|332799823|ref|YP_004461322.1| RnfABCDGE type electron transport complex subunit C [Tepidanaerobacter sp. Re1] gi|332697558|gb|AEE92015.1| electron transport complex, RnfABCDGE type, C subunit [Tepidanaerobacter sp. Re1] Length = 440 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 25/88 (28%), Gaps = 18/88 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C +CP ++ + A + D C Sbjct: 364 SPCIRCARCVDACPINLLPTNLAKFTERGMWAEAENYHALD------------------C 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C+ CP + + I K ++ Sbjct: 406 IECGCCSYVCPAHIPLTQHIRVAKSHII 433 >gi|330834614|ref|YP_004409342.1| hypothetical protein Mcup_0753 [Metallosphaera cuprina Ar-4] gi|329566753|gb|AEB94858.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4] Length = 381 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 20/90 (22%) Query: 170 CVMCACCSTSCPSYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y + Y GP + +Y + Sbjct: 299 CIRCGRCHLHCPVYRVLDGKWGTPPYSGPMGAMWSY---------------IVYGNANHS 343 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP +N K + +IK Sbjct: 344 LLCTHSGGCKEVCPMKINIPKVLERIKSRA 373 >gi|113971072|ref|YP_734865.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113885756|gb|ABI39808.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 464 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A +D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKSDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAG 391 >gi|114048302|ref|YP_738852.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113889744|gb|ABI43795.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 464 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A +D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKSDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAG 391 >gi|311113704|ref|YP_003984926.1| oxidoreductase [Rothia dentocariosa ATCC 17931] gi|310945198|gb|ADP41492.1| oxidoreductase [Rothia dentocariosa ATCC 17931] Length = 967 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDPFRL 224 CV C C CPS D L P + R + + D ERL + + + Sbjct: 551 DRCVECGYCEPVCPS----KDLTLTPRQRIVLRREIAAAEANGDTKLAERLRQEYEYYGV 606 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP +N + +++ Sbjct: 607 DTCAVDGMCVTRCPVQINTGDLVRRLRAE 635 Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 4/40 (10%) Query: 221 PFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDR 257 + RC C CP L P + I ++ + Sbjct: 547 EEEVDRCVECGYCEPVCPSKDLTLTPRQRIV-LRREIAAA 585 >gi|293390123|ref|ZP_06634457.1| electron transport complex protein RnfC [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950657|gb|EFE00776.1| electron transport complex protein RnfC [Aggregatibacter actinomycetemcomitans D7S-1] Length = 790 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 28/100 (28%), Gaps = 23/100 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ CS +CP Y W S D + E Sbjct: 368 EYAPPEEEKNCIRCSACSDACPVKLMPQQLY-----------WFARSEDHEKSE------ 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L C C CP + I + KI Sbjct: 411 -EYSLKDCIECGVCAYVCPSHIPL---IQYFRRE--KAKI 444 >gi|258655326|ref|YP_003204482.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] gi|258558551|gb|ACV81493.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] Length = 493 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 13/94 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + G + + Sbjct: 327 HCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVL--------TPQLTGMHGHHDVNSTL 378 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CP + + +++ +D Sbjct: 379 PYASSLCGACYDVCPVKIPIPDLLVELRGRAVDA 412 >gi|258651274|ref|YP_003200430.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] gi|258554499|gb|ACV77441.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] Length = 493 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 13/94 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + G + + Sbjct: 327 HCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVL--------TPQLTGMHGHHDVNSTL 378 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CP + + +++ +D Sbjct: 379 PYASSLCGACYDVCPVKIPIPDLLVELRGRAVDA 412 >gi|242238678|ref|YP_002986859.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech703] gi|242130735|gb|ACS85037.1| iron-sulfur cluster binding protein [Dickeya dadantii Ech703] Length = 473 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 9/89 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 C+ C C +CP+Y G L L ED L Y C Sbjct: 311 RCIRCGACINTCPAYRHIGGHGYGSIYPGPIGAVL--------SPLLGGYEDFKSLPYAC 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + + I + + +L + Sbjct: 363 SLCTACDDVCPVRIPLSGLILQHRRVLAE 391 >gi|197119277|ref|YP_002139704.1| D-lactate/glycolate dehydrogenase iron-sulfur cluster-binding protein [Geobacter bemidjiensis Bem] gi|197088637|gb|ACH39908.1| D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative [Geobacter bemidjiensis Bem] Length = 413 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CP+Y P + R L + + L+ + Sbjct: 1 MDYVKLINCMRCGMCLPHCPTYKETFLETASPRGRVALVRKLQEGELVESEKFLEYVS-- 58 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+N + +A+ + Sbjct: 59 ----LCLDCQACASACPCGVNAGELVAEFR 84 >gi|90412116|ref|ZP_01220122.1| electron transport complex protein RnfC [Photobacterium profundum 3TCK] gi|90326840|gb|EAS43225.1| electron transport complex protein RnfC [Photobacterium profundum 3TCK] Length = 930 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 18/108 (16%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L ++ C+ C C+ +CP+ ++L Q +W +D Sbjct: 360 NCILAPKRKELPLHTHEMACIRCTACAEACPA-----------SLLPQQLQWYAKDQDYA 408 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E + L+ C C CP + + + K + RK Sbjct: 409 KCE-------EYNLFDCIECGACAYVCPSEIPLVQYYRQAKSEITARK 449 >gi|332295785|ref|YP_004437708.1| Lactate utilization protein B/C [Thermodesulfobium narugense DSM 14796] gi|332178888|gb|AEE14577.1| Lactate utilization protein B/C [Thermodesulfobium narugense DSM 14796] Length = 674 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 19/97 (19%) Query: 169 ECVMCACCSTSCPSYWW------NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C +CP Y + Y GP +L +Y E+++ L Sbjct: 293 NCIKCGACQMACPVYTTVGGQLFRGNTYAGPIGILLSYMENY--------EKMNELS--- 341 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C M C + C + I +IK I Sbjct: 342 --FLCLGCMACDEVCSSKIPIQSLILEIKSKYEKNNI 376 >gi|150005397|ref|YP_001300141.1| putative electron transport protein [Bacteroides vulgatus ATCC 8482] gi|294777178|ref|ZP_06742635.1| putative iron-sulfur cluster-binding protein [Bacteroides vulgatus PC510] gi|149933821|gb|ABR40519.1| putative electron transport protein [Bacteroides vulgatus ATCC 8482] gi|294449047|gb|EFG17590.1| putative iron-sulfur cluster-binding protein [Bacteroides vulgatus PC510] Length = 455 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 8/86 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y + ++ G L + C Sbjct: 302 NCIRCGACMNTCPVYR--------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACS 353 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 +C+ CP ++ A+ I + L Sbjct: 354 LCYSCSFVCPAKVDLAEQIYLWRQDL 379 >gi|149174456|ref|ZP_01853082.1| putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase [Planctomyces maris DSM 8797] gi|148846566|gb|EDL60903.1| putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase [Planctomyces maris DSM 8797] Length = 456 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C +CP Y + + L ++D L + C Sbjct: 301 NCIRCAACMNTCPVYRRSGGYSYSNTVPGPIGSILGPAKDPKANSTLP--------FACS 352 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +CT CP ++ + + L + + Sbjct: 353 LCGSCTDVCPVKIDLHHQLLTWRKELRVKGL 383 >gi|323528051|ref|YP_004230203.1| hypothetical protein BC1001_3731 [Burkholderia sp. CCGE1001] gi|323385053|gb|ADX57143.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1001] Length = 463 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + + +C+ C C +CP Y + G Sbjct: 268 YTSHFRAPRPGTEMHFILVDHGRSERLAMKDFWYSLKCIRCGACMNTCPVYRRSGGLSYG 327 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 328 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRT 379 Query: 253 MLLDR 257 ++ +R Sbjct: 380 VIAER 384 >gi|227495607|ref|ZP_03925923.1| iron-sulfur cluster-binding protein [Actinomyces coleocanis DSM 15436] gi|226830839|gb|EEH63222.1| iron-sulfur cluster-binding protein [Actinomyces coleocanis DSM 15436] Length = 513 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 17/100 (17%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDN 217 C+ C C CP Y + Y GP + + D D Sbjct: 337 HEALSCIRCGACLNICPVYEQVGGHAYNSVYPGPIGICLTPQLKEATDHHDP-------- 388 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + C C +CP ++ I + D Sbjct: 389 --DSTLPFACSLCNACADACPAHIDLPGIIVDRRRAYQDA 426 >gi|134093636|ref|YP_001098711.1| NAD dependent formate dehydrogenase subunit alpha Fdh1A [Herminiimonas arsenicoxydans] gi|133737539|emb|CAL60582.1| Formate dehydrogenase, alpha subunit [Herminiimonas arsenicoxydans] Length = 946 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 29/209 (13%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRS-CREGICGSCGMNIDGTNTLAC-V 101 T+ ++ D +L + + P L + G C +C + I+G LA Sbjct: 18 TFELNGREVTGRATDTILTVAKREGIEIPHLCFKEGMDTAGNCRACVVEINGERVLAPSC 77 Query: 102 KDMKDIKGAIAVYPLPHMS----VIKDLVVDM-SHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + V++ L DM Y++H ++ W + + + Sbjct: 78 CRNPTNGMKVNTESERAVKSQKLVLELLQSDMPETDYTRHNEVDEWAAKMEVGKPRFEAR 137 Query: 157 SHEDRQKIDGLYE-----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + C+ C C +C N +G A + + D Sbjct: 138 ARVAPDFSHPAMTVNLDACIQCTRCVRACRDEQEND--VIGLAFRGDHAKIVFD------ 189 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++DP C C Q+CP G Sbjct: 190 ------MDDPMGASTCVACGECVQACPTG 212 >gi|288926138|ref|ZP_06420065.1| iron-sulfur cluster-binding protein [Prevotella buccae D17] gi|288337030|gb|EFC75389.1| iron-sulfur cluster-binding protein [Prevotella buccae D17] Length = 460 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 36/132 (27%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + +L +C+ C C +CP Y Sbjct: 264 TTTYTSHFRQARPGAEMHVVLVDNGRSNMLADE----NHWQTLKCIRCGSCMNTCPVYRR 319 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D + C ++C + CP +N Sbjct: 320 SGGYSYTYFIPGPIGVNLGMLKDP-----------YRYSDNVSACSLCLSCDKVCPSMVN 368 Query: 243 PAKAIAKIKMML 254 P I + L Sbjct: 369 PGSQIYLWRQSL 380 >gi|46581436|ref|YP_012244.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450858|gb|AAS97504.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235092|gb|ADP87946.1| protein of unknown function DUF162 [Desulfovibrio vulgaris RCH1] Length = 717 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 13/106 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 ++ + + CV C C+ CP Y +G + + RD+ + Sbjct: 298 RRALAEDPLFSQVLRCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGRDKAR 357 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C +C C G++ + I +I+ L + Sbjct: 358 ----------NLVQNCINCESCKHICAGGIDLPRLIKEIRARLNEE 393 >gi|23097826|ref|NP_691292.1| iron-sulfur protein [Oceanobacillus iheyensis HTE831] gi|81747076|sp|Q8ET91|LUTB_OCEIH RecName: Full=Lactate utilization protein B gi|22776050|dbj|BAC12327.1| iron-sulfur protein [Oceanobacillus iheyensis HTE831] Length = 478 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 13/97 (13%) Query: 164 IDGLYECVMCACCSTSCPSY-WWNSDRY--LGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ CA C CP Y Y + P + L+D D+ + Sbjct: 306 FQSALHCIRCAACINVCPVYRHVGGHAYNSIYPGPIGAVLTPLLDGYDDHKEL------- 358 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + + + +++++ Sbjct: 359 ---PYASSLCAACTEACPVKIPLHEQLIRHREIIVEK 392 >gi|291460671|ref|ZP_06600061.1| Na(+)-translocating NADH-quinone reductase, A subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291416630|gb|EFE90349.1| Na(+)-translocating NADH-quinone reductase, A subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 485 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 19/105 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D + C+ C C ++CP + ++ S R Sbjct: 381 LAFLKDPVSAEPTTACINCGRCVSACPENLMPT--------------LMMQSALRKDTAR 426 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-LDRK 258 L C C+ CP + ++K + +R+ Sbjct: 427 FTKLYGME----CIECGCCSYVCPAKRPLTQGFKEMKRRVNAERR 467 >gi|229090348|ref|ZP_04221591.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-42] gi|228692931|gb|EEL46649.1| Glycolate oxidase, iron-sulfur subunit [Bacillus cereus Rock3-42] Length = 417 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 171 VMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C C +CP+Y P + + ++D E + + L C Sbjct: 1 MRCGFCLPTCPTYIQSGYKESHSPRGRIALMKAVVDGFIEPDEDVENTLNV------CLG 54 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP G+N + + + ++ K Sbjct: 55 CRACEPVCPSGVNYGHLLEEARDIINQNK 83 >gi|86150689|ref|ZP_01068910.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596495|ref|ZP_01099732.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562607|ref|YP_002344386.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838870|gb|EAQ56138.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191336|gb|EAQ95308.1| iron-sulfur cluster-binding domain protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360313|emb|CAL35109.1| putative oxidoreductase ferredoxin-type electron transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315928350|gb|EFV07665.1| 4Fe-4S binding domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930178|gb|EFV09299.1| 4Fe-4S binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 421 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + CV C C C + N D P L + E E Sbjct: 1 MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLTAYKEGSLELDKEAKKV--- 57 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L AI +++ + + Sbjct: 58 ---FESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKK 91 >gi|15922648|ref|NP_378317.1| hypothetical protein ST2316 [Sulfolobus tokodaii str. 7] gi|15623438|dbj|BAB67426.1| 627aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 627 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 33/112 (29%), Gaps = 17/112 (15%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + T P L + D + L C+MC C CP + + P Sbjct: 260 YFSIYSNTSLIFPPDVELSNFSDTSGENNLNGCIMCGKCVDVCPYVEYTKSKIYSPLGFY 319 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L +L ++ CH C CP L+ I+K Sbjct: 320 ----------------VLQSLGSSVQI-NCHMCGKCVDVCPANLDIISDISK 354 >gi|325067242|ref|ZP_08125915.1| hypothetical protein AoriK_05449 [Actinomyces oris K20] Length = 171 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 12/35 (34%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C T C CP + + ++ + Sbjct: 5 ADVLWACTTCGACVDQCPVDIEHVDHVVDVRRQQV 39 >gi|194468158|ref|ZP_03074144.1| iron-sulfur cluster binding protein [Lactobacillus reuteri 100-23] gi|194453011|gb|EDX41909.1| iron-sulfur cluster binding protein [Lactobacillus reuteri 100-23] Length = 495 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + + +C+ C C CP Y + G E L ++ Sbjct: 306 FEPMLQCIRCGSCLNVCPVYRQVGGKGYG--------SIYPGPMGEVLSPILGGYQEFKE 357 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L Y C CT++CP + + I + Sbjct: 358 LPYACSLCAACTETCPVKIPLHELIRHHR 386 >gi|329936455|ref|ZP_08286220.1| iron-sulfur protein [Streptomyces griseoaurantiacus M045] gi|329304251|gb|EGG48132.1| iron-sulfur protein [Streptomyces griseoaurantiacus M045] Length = 502 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 26/97 (26%), Gaps = 15/97 (15%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + R Sbjct: 323 RQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAI----LSPQLRGTGSE------I 372 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y C + CP ++ + + ++ + Sbjct: 373 DASLPYASSLCGACYEVCPVAIDIPEVLVHLRERVAQ 409 >gi|212694894|ref|ZP_03303022.1| hypothetical protein BACDOR_04428 [Bacteroides dorei DSM 17855] gi|237710759|ref|ZP_04541240.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237727149|ref|ZP_04557630.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265750431|ref|ZP_06086494.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212662572|gb|EEB23146.1| hypothetical protein BACDOR_04428 [Bacteroides dorei DSM 17855] gi|229434005|gb|EEO44082.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229455481|gb|EEO61202.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263237327|gb|EEZ22777.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 455 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 8/86 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y + ++ G L + C Sbjct: 302 NCIRCGACMNTCPVYR--------RSGGYSYTYFIPGPIGINLGMLKAPLHYYDNVSACS 353 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 +C+ CP ++ A+ I + L Sbjct: 354 LCYSCSFVCPAKVDLAEQIYLWRQDL 379 >gi|320104627|ref|YP_004180218.1| D-lactate dehydrogenase (cytochrome) [Isosphaera pallida ATCC 43644] gi|319751909|gb|ADV63669.1| D-lactate dehydrogenase (cytochrome) [Isosphaera pallida ATCC 43644] Length = 1068 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 18/109 (16%) Query: 159 EDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLI----DS 206 E+R ++ L C C C + CP++ D P +Q R + D Sbjct: 629 EERGFLESLTACNGCGACRSREPGPGLRMCPTFRALGDEAAAPRTQVQLLRSIAAGVIDP 688 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R + N C C CP G++ + + + K + Sbjct: 689 RIWGSDDLKTNAH------LCVHCGLCRVECPAGVDVSALMIEAKAAHV 731 >gi|315635434|ref|ZP_07890700.1| oxidoreductase [Arcobacter butzleri JV22] gi|315480192|gb|EFU70859.1| oxidoreductase [Arcobacter butzleri JV22] Length = 952 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 16/138 (11%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQ---------KIDGLYECVMCACCSTSCPSY 183 Y+ + I+ ++ ++ + + +C+ C C +CPS Sbjct: 509 YNIMKKIKSLFDPKGLLNPGVIINDDKEAHLKNLKTLPATNEIVDKCIECGFCEPTCPSN 568 Query: 184 WWNSDRYLGPAILLQAYRWL--IDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L P + R + ++S ++ + L + C T C+ +CP Sbjct: 569 ELT----LTPRQRIVINREISKLESIGNYKEAKEYKELYQYDGIETCATCSLCSTACPVK 624 Query: 241 LNPAKAIAKIKMMLLDRK 258 ++ ++ L K Sbjct: 625 IDTGSLTKHLRAEQLTSK 642 >gi|212636387|ref|YP_002312912.1| iron-sulfur cluster-binding protein [Shewanella piezotolerans WP3] gi|212557871|gb|ACJ30325.1| Iron-sulfur cluster-binding protein [Shewanella piezotolerans WP3] Length = 457 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 18/89 (20%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A D D + Sbjct: 306 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGAQND--------------DTNSIP 351 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C +C+ CP + K I + + Sbjct: 352 WACTLCGSCSYVCPTKVPLDKIIHHHRRL 380 >gi|297584681|ref|YP_003700461.1| hypothetical protein Bsel_2393 [Bacillus selenitireducens MLS10] gi|297143138|gb|ADH99895.1| protein of unknown function DUF224 cysteine-rich region domain protein [Bacillus selenitireducens MLS10] Length = 447 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLID 205 + K K++ + + D + C+ C C +CP+Y + P + + + D Sbjct: 4 TKKMQKDITADFQTKMDYDEMLNCMRCGFCLPACPTYRETGGNEAASPRGRIALMKAVSD 63 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + +L C C +CP G+ + Sbjct: 64 GMMAPDQDF------EDQLSLCLGCRACEPACPSGVKYGHLLED 101 >gi|83592748|ref|YP_426500.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] gi|83575662|gb|ABC22213.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] Length = 484 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 15/105 (14%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRD-EF 210 D ++ C+ CA C CP Y + P + + ++ D Sbjct: 306 RSRVYDDPQLRDTLRCIRCAACLNHCPVYTRVGGHSYSFTYPGPIGKILSPQLEGLDCAG 365 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L C + CP + + +++ + Sbjct: 366 DQPHASSL-----------CGACAEVCPVEIPIPDLLVRLRGEAI 399 >gi|320353842|ref|YP_004195181.1| regulatory protein MerR [Desulfobulbus propionicus DSM 2032] gi|320122344|gb|ADW17890.1| regulatory protein MerR [Desulfobulbus propionicus DSM 2032] Length = 492 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+ +CP + L P +++ +D D L + ++ Sbjct: 100 ADVCLTCGSCAGACPISGVDD---LDPRKIIRMAFLGLD----------DELVESDWPWK 146 Query: 227 CHTIMNCTQSCPKGLNPAKAI 247 C C CP + + + Sbjct: 147 CTMCGKCEVVCPMNVEIVQLL 167 >gi|147678566|ref|YP_001212781.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] gi|146274663|dbj|BAF60412.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] Length = 421 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLED 220 + + C+ C C SCP Y ++ + +++ ER++ Sbjct: 11 EEEIANCMRCGNCQASCPYYRETLSESNVARGRIRLAKAILEGSLPYSPALAERME---- 66 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C CP G+ K + + L+ + Sbjct: 67 ------CMTCYACNAICPCGVKVDKILLAARAALVRQG 98 >gi|154174225|ref|YP_001408381.1| hypothetical protein CCV52592_0772 [Campylobacter curvus 525.92] gi|112802590|gb|EAT99934.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 366 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 16/184 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + E RI+R++ + Y+ D G + LL K DP Sbjct: 19 MLEVRIFRFDAKHDVLRYYKPYFFD--KPGFKTPEILLKEAKKQDPFFEC--------GK 68 Query: 87 SCGMNIDGT---NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 S + I+G ++ + + PL +KDLV+D F+++ + + Sbjct: 69 SSHIKINGVVVPIDWDFDDILRRFGDKLTIEPLSTKRAVKDLVIDDGDFWAKFKPFAKFC 128 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS---CPSYWWNSDRYLGPAILLQAY 200 +L D V + + C Y D L + Sbjct: 129 DASDKAAYAQLAPYFYADFIKDYESGFVGASAIILAKILCEKYPQKKDEILQLVADKKTG 188 Query: 201 RWLI 204 W+ Sbjct: 189 VWIA 192 >gi|90411734|ref|ZP_01219743.1| Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Photobacterium profundum 3TCK] gi|90327296|gb|EAS43660.1| Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit C [Photobacterium profundum 3TCK] Length = 403 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 29/95 (30%), Gaps = 10/95 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 QK +C+ C C+ CP N Y GP L EF E L Sbjct: 5 QKDTSFDQCIKCTVCTVYCPVAKANP-EYPGPKQCGPDGERLRIKSPEFYDETLKL---- 59 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C +CP G+ IA + Sbjct: 60 -----CTNCKRCETACPSGVKIGDMIAVARDEHAK 89 >gi|54309723|ref|YP_130743.1| electron transport complex protein RnfC [Photobacterium profundum SS9] gi|46914161|emb|CAG20941.1| putative NADH:ubiquinone oxidoreductase, subunit RnfC [Photobacterium profundum SS9] Length = 761 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L ++ C+ C C+ +CP+ ++L Q +W Sbjct: 354 PITKITNCILAPKRKELPLHTHEMACIRCTACAEACPA-----------SLLPQQLQWYA 402 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + E + L+ C C CP + + + K + RK Sbjct: 403 KDQDYAKCE-------EYNLFDCIECGACAYVCPSEIPLVQYYRQAKSEITARK 449 >gi|117921348|ref|YP_870540.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117613680|gb|ABK49134.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 464 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A D D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGAKHD--------------DTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAG 391 >gi|332288640|ref|YP_004419492.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Gallibacterium anatis UMN179] gi|330431536|gb|AEC16595.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Gallibacterium anatis UMN179] Length = 470 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 9/92 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 C+ C C +CP Y G L L N ++ L Y C Sbjct: 311 RCIRCGACLNTCPVYRQIGGHSYGSVYPGPIGSVL--------SPLLGNYQEFHDLPYAC 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C Q CP + A + K + + ++ + Sbjct: 363 SLCTACNQVCPVKIPLANLLLKHRTHIAEQGL 394 >gi|52548851|gb|AAU82700.1| heterodisulfide reductase subunit B [uncultured archaeon GZfos19A5] Length = 484 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 14/98 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWN----SDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +I Y C+ C C++ CP+ + P ++Q + + RD Sbjct: 13 EDPRIPNFYSCLQCGKCTSICPAAHAYYVDGDNGKYNPREIVQILKTDPEYRD------- 65 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + + C+ C CP G + + I +K Sbjct: 66 ---LNDYAIENCYHCYTCKSVCPVGNSVSDIIKVLKER 100 >gi|73669456|ref|YP_305471.1| heterodisulfide reductase subunit HdrC [Methanosarcina barkeri str. Fusaro] gi|72396618|gb|AAZ70891.1| heterodisulfide reductase subunit HdrC [Methanosarcina barkeri str. Fusaro] Length = 236 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---LEDPFR 223 L C+ C C+ SCP A R+ S + + L+N + + Sbjct: 32 LDRCIQCGACTASCP-----------------AARFTDYSPRQIVKKVLENDRSVLESEM 74 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C +C CP+ +P + ++ M ++ I Sbjct: 75 IWSCFYCYSCNLRCPRNNSPVTIVQVLRQMAINEGI 110 >gi|306820180|ref|ZP_07453824.1| iron-sulfur cluster-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551781|gb|EFM39728.1| iron-sulfur cluster-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 719 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 16/102 (15%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLD 216 ++ C+ C C CP++ G + +L+D ER Sbjct: 306 PDFREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTMLTHFLVD------EERAS 359 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +++ C C + C GL+ + I +++ + K Sbjct: 360 EIQNI-----CLQCGRCNEVCGGGLHISDMIMRLREKNMQEK 396 >gi|259415268|ref|ZP_05739190.1| formate dehydrogenase, alpha subunit [Silicibacter sp. TrichCH4B] gi|259349178|gb|EEW60932.1| formate dehydrogenase, alpha subunit [Silicibacter sp. TrichCH4B] Length = 924 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 47/177 (26%), Gaps = 34/177 (19%) Query: 82 EGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + + V P + Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPAEGMVVTTNNARATNARKMVMELLVADQPAQDIAH 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D M + E + L L C+ C C +C Sbjct: 107 DKSSHMWDMAELNGVSESRFPKLEEG--HIPLLDDSHVAMSVNLDACISCGLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 165 QVND--VIGMAGRGHNAYPTFD------------IADPMGASSCVACGECVQACPTG 207 >gi|255324798|ref|ZP_05365912.1| FAD linked oxidase domain protein [Corynebacterium tuberculostearicum SK141] gi|255298273|gb|EET77576.1| FAD linked oxidase domain protein [Corynebacterium tuberculostearicum SK141] Length = 934 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 16/136 (11%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y+ + ++ + +L D + + CV C C C Sbjct: 490 DELYAVMQELKRACDPSNTMNPGVILDDDPDAHIKNIKLNPTVEEEVDRCVECGYCEPVC 549 Query: 181 PSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PS D L P + +A + ++ D LD + + C C +C Sbjct: 550 PSR----DLTLTPRQRIVVRRARKRAEEAGDSQLVAELDEAYEYMGIETCAVDSMCRTAC 605 Query: 238 PKGLNPAKAIAKIKMM 253 P G++ K I +++ Sbjct: 606 PVGIDTGKFIKRLRRE 621 >gi|311740012|ref|ZP_07713846.1| oxidoreductase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305085|gb|EFQ81154.1| oxidoreductase [Corynebacterium pseudogenitalium ATCC 33035] Length = 934 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 16/136 (11%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y+ + ++ + +L D + + CV C C C Sbjct: 490 DELYAVMQELKRACDPSNTMNPGVILDDDPDAHIKNIKLNPTVEEEVDRCVECGYCEPVC 549 Query: 181 PSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PS D L P + +A + ++ D LD + + C C +C Sbjct: 550 PSR----DLTLTPRQRIVVRRARKRAEEAGDSQLVAELDEAYEYMGIETCAVDSMCRTAC 605 Query: 238 PKGLNPAKAIAKIKMM 253 P G++ K I +++ Sbjct: 606 PVGIDTGKFIKRLRRE 621 >gi|261867803|ref|YP_003255725.1| electron transport complex protein RnfC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413135|gb|ACX82506.1| electron transport complex protein RnfC [Aggregatibacter actinomycetemcomitans D11S-1] Length = 745 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 26/91 (28%), Gaps = 23/91 (25%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ CS +CP Y W S D + E + L C Sbjct: 377 NCIRCSACSDACPVKLMPQQLY-----------WFARSEDHEKSE-------EYSLKDCI 418 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 419 ECGVCAYVCPSHIPL---IQYFRRE--KAKI 444 >gi|254445734|ref|ZP_05059210.1| iron-sulfur cluster binding protein [Verrucomicrobiae bacterium DG1235] gi|198260042|gb|EDY84350.1| iron-sulfur cluster binding protein [Verrucomicrobiae bacterium DG1235] Length = 468 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 15/90 (16%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y Y GP + + L +L Sbjct: 307 RCIRCGACLNTCPVYRQTSGHAYRAVYPGPVGSVLSPLINRHG-----FAPLADLPKASS 361 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C + CP + + +++ Sbjct: 362 L-----CGACQEVCPVNIPIPDLLVRLRNK 386 >gi|167628496|ref|YP_001678995.1| iron-sulfur cluster-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591236|gb|ABZ82984.1| iron-sulfur cluster-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 436 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 6/89 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y ++ +++ + + LD + C Sbjct: 16 QCMKCGNCQAVCPLYAETMHEGAVARGKIRLAVDVLEGKLQPSHAVLD------KFALCL 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C +CP G++ I + L ++ Sbjct: 70 TCKACEANCPCGVHCVDIILAARAQLAEK 98 >gi|153814812|ref|ZP_01967480.1| hypothetical protein RUMTOR_01027 [Ruminococcus torques ATCC 27756] gi|317500331|ref|ZP_07958556.1| Na(+)-translocating NADH-quinone reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089660|ref|ZP_08338559.1| hypothetical protein HMPREF1025_02142 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847843|gb|EDK24761.1| hypothetical protein RUMTOR_01027 [Ruminococcus torques ATCC 27756] gi|316898272|gb|EFV20318.1| Na(+)-translocating NADH-quinone reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405028|gb|EGG84566.1| hypothetical protein HMPREF1025_02142 [Lachnospiraceae bacterium 3_1_46FAA] Length = 439 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + K + +L ED C+ CA C CPS Sbjct: 331 MMGFAMVSAEAPVTKTSSSILAFKEDIVSKSVETACINCARCVDVCPS-----------R 379 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 I+ L DE ++ LE C +C+ CP +AI ++ + Sbjct: 380 IIPSRLADLAQRHDEKAFVAMNGLE-------CVECGSCSYVCPAKRPLKQAIGSMRKIA 432 Query: 255 LDRK 258 L K Sbjct: 433 LANK 436 >gi|220934441|ref|YP_002513340.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995751|gb|ACL72353.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 453 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 13/112 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDS-------RDE 209 + C+ C C+ +C Y D P QAY+ Sbjct: 53 ATAATYMESCIHCGQCAEACHFYVQTEDPRYTPIWKLEPFKQAYKREAGPFSLVYRLLSL 112 Query: 210 FQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L++ L C CT CP G++ A + + + + I Sbjct: 113 KKKVTTAELKEWQELIYDSCTMCGRCTMICPMGIDIATLVGQARHGMFQAGI 164 >gi|20091945|ref|NP_618020.1| heterodisulfide reductase, subunit C [Methanosarcina acetivorans C2A] gi|19917147|gb|AAM06500.1| heterodisulfide reductase, subunit C [Methanosarcina acetivorans C2A] Length = 247 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---LEDPFR 223 L C+ C C+ SCP A R+ S + + L+N + + Sbjct: 38 LDRCIQCGACTASCP-----------------AARFTDYSPRQIVKKVLENDRSVLESEM 80 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C +C CP+ +P + ++ M ++ I Sbjct: 81 IWSCFYCYSCNLRCPRNNSPVTIVQVLRQMAINEGI 116 >gi|37526280|ref|NP_929624.1| electron transport complex protein RnfC [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785711|emb|CAE14696.1| Electron transport complex protein RnfC [Photorhabdus luminescens subsp. laumondii TTO1] Length = 852 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L SH++ C+ C C +CP+ +L Q W ++ Sbjct: 358 NCILAPSHQEMDSNTTEEACIRCGLCVEACPA-----------RLLPQQLYWFSRGQEHE 406 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L+ C C CP + + Sbjct: 407 KAR-------DHNLFDCIECGACAYVCPSNIPLVQ 434 >gi|325281925|ref|YP_004254467.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Odoribacter splanchnicus DSM 20712] gi|324313734|gb|ADY34287.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Odoribacter splanchnicus DSM 20712] Length = 406 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 12/105 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + +C+ C C+ CP N D Y GP + + + R Sbjct: 1 MNLQQHNISDNNFEQCIKCTVCTVYCPVAAVNPD-YPGPK----------QAGPDGERLR 49 Query: 215 LDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L L C C +CP + I ++ +K Sbjct: 50 LKKFGFYDETLKYCINCKRCEVACPSNVKIGDIIQAARIKFSKKK 94 >gi|315604797|ref|ZP_07879856.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313468|gb|EFU61526.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 534 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + + L DE + L L Sbjct: 339 CIRCGSCMNICPVYQHTSGHAYGSVYPGPIGAILTPQ-LTQGLDEKDP--VHTLPFASSL 395 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP ++ + ++ +D Sbjct: 396 -----CGACGEVCPVKIDIPTILIHMRARTVD 422 >gi|256545800|ref|ZP_05473156.1| iron-sulfur cluster-binding protein [Anaerococcus vaginalis ATCC 51170] gi|256398496|gb|EEU12117.1| iron-sulfur cluster-binding protein [Anaerococcus vaginalis ATCC 51170] Length = 719 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 16/99 (16%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLDNL 218 ++ C+ C C CP++ G + +LID +R + + Sbjct: 309 YREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTLLTHFLID------KDRANEI 362 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E C C + C GL A+ I K++ + Sbjct: 363 ESV-----CLQCGRCNEVCGGGLPIAEMIMKVREEHVKE 396 >gi|323698415|ref|ZP_08110327.1| protein of unknown function DUF162 [Desulfovibrio sp. ND132] gi|323458347|gb|EGB14212.1| protein of unknown function DUF162 [Desulfovibrio desulfuricans ND132] Length = 716 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C+ CP Y +G + + +D+ + + Sbjct: 312 RCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGKDKAKNL----------VQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ + I +I + D Sbjct: 362 NCINCEACKDVCAGGIDLPRLIKEIHARIQDE 393 >gi|307721468|ref|YP_003892608.1| hypothetical protein Saut_1549 [Sulfurimonas autotrophica DSM 16294] gi|306979561|gb|ADN09596.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sulfurimonas autotrophica DSM 16294] Length = 427 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 8/106 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + +C+ C C C + N+D P + D ++ Sbjct: 1 MSKRVEDIFSFDAIADDCIKCGKCIPVCTIHNVNADEVTSPRGFI-------DLLGAYKR 53 Query: 213 ERLDNLEDPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ + ++ C C + CPK L I +++ + + Sbjct: 54 GNLELDKTAKGIFESCFLCTACVEVCPKSLPTDMIIEQVRSDIAQK 99 >gi|284990285|ref|YP_003408839.1| iron-sulfur cluster binding protein [Geodermatophilus obscurus DSM 43160] gi|284063530|gb|ADB74468.1| iron-sulfur cluster binding protein [Geodermatophilus obscurus DSM 43160] Length = 512 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 18/176 (10%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 267 NGRMCLTLPQTLITVMGIEKLVPTWRDLEVFLQLLPRSSTGERMNPYTSMWTGVTPGDGP 326 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 ++ D + L C+ C+ C CP Y G L Sbjct: 327 QDFHLVLLDNGRTAVLADEVGREALHCIRCSACLNVCPVYERTGGHSYGSVYPGPIGAVL 386 Query: 204 IDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L +ED L Y C +CP ++ + ++ ++ + Sbjct: 387 --------SPQLTGVEDNASLPYASSLCGACYDACPVAIDIPSILVHLRAEHVEAQ 434 >gi|182626539|ref|ZP_02954287.1| iron-sulfur cluster-binding protein [Clostridium perfringens D str. JGS1721] gi|177908127|gb|EDT70693.1| iron-sulfur cluster-binding protein [Clostridium perfringens D str. JGS1721] Length = 370 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP D ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFGDS----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|90579569|ref|ZP_01235378.1| putative electron transport protein ykgF [Vibrio angustum S14] gi|90439143|gb|EAS64325.1| putative electron transport protein ykgF [Vibrio angustum S14] Length = 470 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C +CP+Y + G L + D C Sbjct: 312 RCIRCAACVNTCPAYRHIGGQSYGSIYSGPIGAVLS-PLLGGYEDFKDLPN------ACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + ++ + K + ++ + KI Sbjct: 365 LCRACHDVCPVKIPLSELLLKHRQIMGEEKI 395 >gi|134298235|ref|YP_001111731.1| putative heterodisulfide reductase subunit C [Desulfotomaculum reducens MI-1] gi|134050935|gb|ABO48906.1| putative heterodisulfide reductase, C subunit [Desulfotomaculum reducens MI-1] Length = 187 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C+ CP + Q R L LD ++ C Sbjct: 26 HCYQCGKCTAGCPVAFAMD------IAPNQIIRMLQLGL-------LDEALRSETIWLCA 72 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 T C+ CPKG + AK + ++ L + I Sbjct: 73 TCSTCSTRCPKGFDLAKLMDSLRSYALQQGI 103 >gi|301061799|ref|ZP_07202532.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300444089|gb|EFK08121.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 230 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 13/112 (11%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +P + + R + C C C+ CP + P ++ +D Sbjct: 1 MEPLTINRKESKLRVAPEWADVCFTCGTCAGGCPVTGVDGMD---PRKAVRMAALGLD-- 55 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L D + C C +CP+G+ K + + + + K+ Sbjct: 56 --------QELIDSRFPWICTLCGRCEYACPQGVEILKMMRRARSLRERDKV 99 >gi|296119497|ref|ZP_06838055.1| iron-sulfur cluster-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295967380|gb|EFG80647.1| iron-sulfur cluster-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 510 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 46/174 (26%), Gaps = 24/174 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W Sbjct: 242 NGRMCLTMPETLITLMGIEKLLPTFQDLEVFLQLLPRSSTAERMNPYTSLWSGVTEGDGP 301 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + L +C+ C+ C CP Y Y GP + Sbjct: 302 QNFHIVLLDNGRTAALSSEIGSQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI-- 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 S D+ + L Y C C + CP + + I + + Sbjct: 360 -------SLTPQLTGMKDHNDPSASLPYACSLCGRCDEVCPVKIPLSDVILENR 406 >gi|258653717|ref|YP_003202873.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] gi|258556942|gb|ACV79884.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] Length = 501 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 13/94 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + + G+ L Sbjct: 327 HCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVLTPQL---TGMHGHGDVNSTLPYASS 383 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C CP + + +++ +D Sbjct: 384 L-----CGACYDVCPVKIPIPDLLVELRGRAVDA 412 >gi|258514277|ref|YP_003190499.1| hypothetical protein Dtox_0987 [Desulfotomaculum acetoxidans DSM 771] gi|257777982|gb|ACV61876.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 411 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 6/93 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +CV C C + CP + + P + + L + + NL Sbjct: 12 QSQFQKCVRCGLCRSVCPIFKEDRRETAAPRGKVFLAQMLAEGEITPDSKAAQNLS---- 67 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C +C+ CP G+ K ++ + M+ + Sbjct: 68 --MCLMCESCSSECPSGIEVHKIVSLARSMVNE 98 >gi|52426050|ref|YP_089187.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Mannheimia succiniciproducens MBEL55E] gi|52308102|gb|AAU38602.1| GlpC protein [Mannheimia succiniciproducens MBEL55E] Length = 425 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 27/108 (25%), Gaps = 10/108 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + C+ C C+ CP N Y GP D Sbjct: 12 QDMQSPIAAEIFHDKSFESCIKCTACTAVCPVSRNNP-LYPGPKQA---------GPDGE 61 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C +CP + I + + L ++ Sbjct: 62 RLRLKSPSFYDEALKYCLNCKRCEVACPSDVKIGDIIVRARNKHLAQQ 109 >gi|126090184|ref|YP_001041665.1| electron transport complex protein RnfC [Shewanella baltica OS155] gi|126174477|ref|YP_001050626.1| electron transport complex protein RnfC [Shewanella baltica OS155] gi|125997682|gb|ABN61757.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS155] gi|125999840|gb|ABN63910.1| hypothetical protein Sbal_4547 [Shewanella baltica OS155] Length = 884 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 29/174 (16%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 ++ G L + + A P P VI M H + + + Sbjct: 305 NVSKPGNYWLPIGTPVDHVLTATEFTPEPDQKVIIG-GPMMGHALANIQV------PILK 357 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 L+ S ++ C+ C C+T+CP+ L P L Sbjct: 358 GTNCILVPSSQEIGNTPEEKACIRCGECATACPAL-------LLPQQLFWH--------- 401 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 + E D + L C C+ CP + + IAK +K +++ Sbjct: 402 -AKAEEYDKAA-SYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQ 453 >gi|154509434|ref|ZP_02045076.1| hypothetical protein ACTODO_01965 [Actinomyces odontolyticus ATCC 17982] gi|153799068|gb|EDN81488.1| hypothetical protein ACTODO_01965 [Actinomyces odontolyticus ATCC 17982] Length = 540 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 13/94 (13%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + + L DE + L L Sbjct: 345 CIRCGSCMNICPVYQHTSGHAYGSVYPGPIGAILTPQ-LTQGLDEHDP--VHTLPFASSL 401 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 402 -----CGACGEVCPVKIDIPTILIHMRARTVDVK 430 >gi|70606047|ref|YP_254917.1| hypothetical protein Saci_0205 [Sulfolobus acidocaldarius DSM 639] gi|68566695|gb|AAY79624.1| conserved protein [Sulfolobus acidocaldarius DSM 639] Length = 322 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 15/84 (17%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C SCP+Y P + A + IDS L C Sbjct: 10 KCVHCGFCLESCPTYVVTRSEIHSPRGRITAVKLGIDS---------------EGLKTCM 54 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKM 252 C +CP G+ ++ + Sbjct: 55 FCRKCEIACPSGVKYSEIFVNSRK 78 >gi|237736239|ref|ZP_04566720.1| 4Fe-4S ferredoxin [Fusobacterium mortiferum ATCC 9817] gi|229421587|gb|EEO36634.1| 4Fe-4S ferredoxin [Fusobacterium mortiferum ATCC 9817] Length = 341 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 21/151 (13%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL + ++ + + + +C+ C C+ CP+ Sbjct: 191 DLEELKKSIKEKLATLPLKNLNPKKITKAQQEIFDMEEFWGEISKKCLACGSCTFVCPTC 250 Query: 184 WWNSDRYLGPAILLQAYR-----WLID-SRDEFQGERLDNLE---------------DPF 222 + + YR + D +R R L+ + Sbjct: 251 HCYDVKDYDGGNCGERYRCWDSCMISDFTRMAHGNPRTSQLQRVRQRFMHKLVYYPKNHD 310 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 LY C C + CP GLN K I K+ Sbjct: 311 GLYSCVGCGRCIEKCPIGLNIVKVIKKLGEE 341 >gi|15922188|ref|NP_377857.1| hypothetical protein ST1875 [Sulfolobus tokodaii str. 7] gi|15622977|dbj|BAB66966.1| 279aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 279 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 13/144 (9%) Query: 115 PLPHMSVIKDLVVDMSHFY-SQHRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVM 172 PLP + D+ D+ + R+ E LK + K D + + L C+ Sbjct: 8 PLPDDPRVMDMAYDVQAVEPEELRNFESNLKPEERELAIKYWQAVKSDFRFNEYLRGCLN 67 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C++ CP+ + GP ++Q + D+ D+ +++ C Sbjct: 68 CGVCTSGCPAAKFYD---FGPREMIQ--YMMRDAVDKIWEFV------NKKVWACVQCYT 116 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLD 256 C+ CP A I ++ + Sbjct: 117 CSMRCPFNNEIAGLIMLLREYAVQ 140 >gi|251792842|ref|YP_003007568.1| electron transport complex protein RnfC [Aggregatibacter aphrophilus NJ8700] gi|247534235|gb|ACS97481.1| electron transport complex protein RnfC [Aggregatibacter aphrophilus NJ8700] Length = 843 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 28/100 (28%), Gaps = 23/100 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ CS +CP Y W S D + E Sbjct: 368 EYAPPEEEKSCIRCSACSDACPVKLMPQQLY-----------WFARSEDHEKAE------ 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L C C CP + I + KI Sbjct: 411 -EYSLKDCIECGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|229010455|ref|ZP_04167658.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides DSM 2048] gi|228750798|gb|EEM00621.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides DSM 2048] Length = 476 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 17/95 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAACINVCPVYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 356 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + ++ K Sbjct: 357 PYASSLCGACTEACPVKIPLHDLLIKHRSRIVVEK 391 >gi|56412817|ref|YP_149892.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361750|ref|YP_002141386.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127074|gb|AAV76580.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093226|emb|CAR58671.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 396 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 25/93 (26%), Gaps = 10/93 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+T+CP N Y GP D + D Sbjct: 1 MSDTRFESCIKCTVCTTACPVSRVNPG-YPGPKQA---------GPDGERLRLKDGALYD 50 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQCARAKY 83 >gi|326405383|ref|YP_004285465.1| hypothetical protein ACMV_32360 [Acidiphilium multivorum AIU301] gi|325052245|dbj|BAJ82583.1| hypothetical protein ACMV_32360 [Acidiphilium multivorum AIU301] Length = 473 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 26/102 (25%), Gaps = 19/102 (18%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQA-YRWLIDSRDEFQGERLDN 217 + C+ C+ C CP Y Y GP + + D Q L Sbjct: 308 FQDMLRCIRCSACMNHCPVYLTVGGHAYGSMYSGPMGSVLTPAIFGAD-----QAHLLPT 362 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + +R + Sbjct: 363 AS--------TFCGKCESVCPMKIPLTGMMRHWRERAFERHL 396 >gi|307725796|ref|YP_003909009.1| hypothetical protein BC1003_3778 [Burkholderia sp. CCGE1003] gi|307586321|gb|ADN59718.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1003] Length = 463 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + + +C+ C C +CP Y + G Sbjct: 268 YTSHFRAPRPGAEMHFILVDHGRSERLAMEDFWYSLKCIRCGACMNTCPVYRRSGGLSYG 327 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 328 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRT 379 Query: 253 MLLDR 257 ++ +R Sbjct: 380 VIAER 384 >gi|168210315|ref|ZP_02635940.1| iron-sulfur cluster-binding protein [Clostridium perfringens B str. ATCC 3626] gi|170711661|gb|EDT23843.1| iron-sulfur cluster-binding protein [Clostridium perfringens B str. ATCC 3626] Length = 370 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP D ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFGDS----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|126460183|ref|YP_001056461.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249904|gb|ABO08995.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 427 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 14/106 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +I L C+ CA C+ SCP ++ P +A R ++ ++ F G L L Sbjct: 12 APEIHYLEACIGCAACAPSCPYFYV--SEEYSPVDKAEAARRILRTKYTFAGRILGPLVG 69 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 YRC +C ++C G+ + +++ ML Sbjct: 70 AKRPSEKDLDRLLDIAYRCTGCGSCYETCTVGIYSGGLVFRLREML 115 >gi|78485378|ref|YP_391303.1| electron transport complex, RnfABCDGE type, C subunit [Thiomicrospira crunogena XCL-2] gi|78363664|gb|ABB41629.1| NADH oxidoreductase, RnfABCDGE type, C subunit [Thiomicrospira crunogena XCL-2] Length = 704 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 25/97 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP L P L R S + + E L ++ C Sbjct: 390 CIRCGECMDACPVN-------LLPQQLYWHSR----SHEFDKVESLK-------VFDCIE 431 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMMLLDRKI 259 C+ CP + + I IK ++ Sbjct: 432 CGCCSFVCPSHIPLVQYYRFAKSEIKHIKQEEATAEL 468 >gi|21674068|ref|NP_662133.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium tepidum TLS] gi|21647221|gb|AAM72475.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium tepidum TLS] Length = 500 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 13/100 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++ + C C C+ CP+ + + + R + Q ++ Sbjct: 15 EQTTGNHYACCYQCGKCTAGCPAGGFMDNP------PARIMRLV-------QAGYVEEAM 61 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ C M CT CP+ + A + ++ M L I Sbjct: 62 QSDSLWYCIGCMTCTARCPQNMEIAGTMDAVREMALKSGI 101 >gi|291545698|emb|CBL18806.1| hypothetical protein CK1_05080 [Ruminococcus sp. SR1/5] Length = 324 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 6/116 (5%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + + + + + + + L +C+ C C CP+ Sbjct: 167 YDELIGESKETKDADRFAEVERIEAMSPEEKFAFWQSELSKCIRCNACRNVCPACSCRKC 226 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNP 243 + A + +DS E++ ++ F + RC C++ CP+G+ Sbjct: 227 VFDS-NKFDSAQKANVDS----FEEKMFHVIRAFHVAGRCTDCGECSRVCPQGIPL 277 >gi|212704341|ref|ZP_03312469.1| hypothetical protein DESPIG_02396 [Desulfovibrio piger ATCC 29098] gi|212672303|gb|EEB32786.1| hypothetical protein DESPIG_02396 [Desulfovibrio piger ATCC 29098] Length = 718 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++ CV C C+ CP + Y+ + + +D+ + Sbjct: 310 FSQIFRCVRCGACANVCPVFRLVGGHKMGYIYIGAIGLILTYFFHGKDKAKVL------- 362 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C C G++ + I +I+ L D + Sbjct: 363 ---CQNCVGCESCKNVCAGGIDLPRLIREIRSRLTDEQ 397 >gi|209885821|ref|YP_002289678.1| formate dehydrogenase, alpha subunit [Oligotropha carboxidovorans OM5] gi|209874017|gb|ACI93813.1| formate dehydrogenase, alpha subunit [Oligotropha carboxidovorans OM5] Length = 923 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 56/201 (27%), Gaps = 41/201 (20%) Query: 81 REGICGSCGMNIDGTNTLACVK--------------DMKDIKGAIAVYPL----PHMSVI 122 +G C +C + I+G LA + + + L P + Sbjct: 45 ADGNCRACMVEIEGERVLAASCMRMPAVGMKVKSASERAASARKMVIELLVADQPERTTS 104 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D + + E L C+ C C +C Sbjct: 105 HDPDSKFWQWADRVEVAESRFPKAERWTGDYSHP-----AMSVNLDACIQCGLCVRACRE 159 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-L 241 N +G A + + D +DP C C Q+CP G L Sbjct: 160 VQVND--VIGMAYRNHGAKVVFD------------FDDPMGESTCVACGECVQACPTGAL 205 Query: 242 NPAKAIAK---IKMMLLDRKI 259 PA + + + + DRK+ Sbjct: 206 MPASLLDEQHFTRTVYADRKV 226 >gi|84514634|ref|ZP_01001998.1| formate dehydrogenase, alpha subunit [Loktanella vestfoldensis SKA53] gi|84511685|gb|EAQ08138.1| formate dehydrogenase, alpha subunit [Loktanella vestfoldensis SKA53] Length = 921 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 50/178 (28%), Gaps = 35/178 (19%) Query: 81 REGICGSCGMNIDGTNTLACVK------------------DMKDIKGAIAVYPLPHMSVI 122 +G C +C + I+G TLA + + + V P V Sbjct: 46 SDGNCRACMVAIEGERTLAASCIREPRDGMVVTTDGPREVQARRMVMELLVADQPAQDVA 105 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D SH + + + K L L C+ C C +C Sbjct: 106 HD---RSSHLWDMAGAQGVAVSRFPAKAEHIPLLDDSHVAMSVNLDACIQCGLCVRACRE 162 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D ++DP C C Q+CP G Sbjct: 163 VQVND--VIGMAGRGGTAYPVFD------------MDDPMGGSSCVACGECVQACPTG 206 >gi|227545112|ref|ZP_03975161.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri CF48-3A] gi|300909216|ref|ZP_07126677.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri SD2112] gi|227184900|gb|EEI64971.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri CF48-3A] gi|300893081|gb|EFK86440.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri SD2112] Length = 495 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + + +C+ C C CP Y + G E L ++ Sbjct: 306 FEPMLQCIRCGSCLNVCPVYRQVGGKGYG--------SIYPGPMGEVLSPILGGYQEFKE 357 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L Y C CT++CP + + I + Sbjct: 358 LPYACSLCAACTETCPVKIPLHELIRHHR 386 >gi|148543610|ref|YP_001270980.1| iron-sulfur cluster binding protein [Lactobacillus reuteri DSM 20016] gi|184153018|ref|YP_001841359.1| iron-sulfur cluster binding protein [Lactobacillus reuteri JCM 1112] gi|227363427|ref|ZP_03847551.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri MM2-3] gi|325681964|ref|ZP_08161482.1| iron-sulfur cluster binding protein [Lactobacillus reuteri MM4-1A] gi|148530644|gb|ABQ82643.1| iron-sulfur cluster binding protein [Lactobacillus reuteri DSM 20016] gi|183224362|dbj|BAG24879.1| iron-sulfur cluster binding protein [Lactobacillus reuteri JCM 1112] gi|227071527|gb|EEI09826.1| iron-sulfur cluster-binding protein [Lactobacillus reuteri MM2-3] gi|324978608|gb|EGC15557.1| iron-sulfur cluster binding protein [Lactobacillus reuteri MM4-1A] Length = 495 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + + +C+ C C CP Y + G E L ++ Sbjct: 306 FEPMLQCIRCGSCLNVCPVYRQVGGKGYG--------SIYPGPMGEVLSPILGGYQEFKE 357 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L Y C CT++CP + + I + Sbjct: 358 LPYACSLCAACTETCPVKIPLHELIRHHR 386 >gi|326797461|ref|YP_004315280.1| lactate utilization protein B/C [Sphingobacterium sp. 21] gi|326548225|gb|ADZ76610.1| Lactate utilization protein B/C [Sphingobacterium sp. 21] Length = 462 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y G + E Y Sbjct: 311 YCIRCGACLNACPIYKNVGGHTYGTTYSGPIGSII-------TPHMKGMQEFKHLSYASS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C++ CP ++ K + + + + Sbjct: 364 LCGKCSEVCPVKIDIHKMLLLNRRDSVKEGL 394 >gi|325958956|ref|YP_004290422.1| Heterodisulfide reductase subunit C, HdrC2 [Methanobacterium sp. AL-21] gi|325330388|gb|ADZ09450.1| Heterodisulfide reductase subunit C, HdrC2 [Methanobacterium sp. AL-21] Length = 196 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 18/101 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDN 217 G+Y+CV C C++ CP + Y D RD + E + Sbjct: 22 KASPDLGIYKCVQCGMCTSICP--GASQSDY--------------DPRDMVRRVLEDDVS 65 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D ++ C + C CP G N ++ ++ M +D+ Sbjct: 66 IVDDENIWNCFSCYTCNSVCPSGNNASEVNQILRQMSIDKG 106 >gi|307596242|ref|YP_003902559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551443|gb|ADN51508.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] Length = 104 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 36/96 (37%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R+ + + +C C C CP++ R GP + + LI++ ++ Sbjct: 5 REIYEEVRKCQFCGFCELPCPTFNALRSRAYGPRGRINLIKTLIENGFGQDKNAEMGVDV 64 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C C CP G+ A I K ++L Sbjct: 65 INSIMTCLHCAACDTQCPAGIKIADTIHSFKAIILK 100 >gi|293189531|ref|ZP_06608251.1| iron-sulfur cluster-binding protein [Actinomyces odontolyticus F0309] gi|292821621|gb|EFF80560.1| iron-sulfur cluster-binding protein [Actinomyces odontolyticus F0309] Length = 534 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 13/94 (13%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + + L DE + L L Sbjct: 339 CIRCGSCMNICPVYQHTSGHAYGSVYPGPIGAILTPQ-LTQGLDEHDP--VHTLPFASSL 395 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 396 -----CGACGEVCPVKIDIPTILIHMRARTVDVK 424 >gi|282164661|ref|YP_003357046.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] gi|282156975|dbj|BAI62063.1| putative CoB--CoM heterodisulfide reductase iron-sulfur subunit C [Methanocella paludicola SANAE] Length = 188 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 16/90 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LY 225 +C+ C C+ SCP+ + D YR RD + +L N + L+ Sbjct: 23 YEKCMQCGRCTASCPAAFTYDD-----------YR----PRDIMRDLQLGNRDSLTSILW 67 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RC +C CP+ + I ++ L Sbjct: 68 RCGQCYSCAARCPRNNSVGAGILALREAAL 97 >gi|297539546|ref|YP_003675315.1| RnfABCDGE type electron transport complex subunit C [Methylotenera sp. 301] gi|297258893|gb|ADI30738.1| electron transport complex, RnfABCDGE type, C subunit [Methylotenera sp. 301] Length = 640 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ CA C+ +CP + Y D F+ R + Sbjct: 378 PPPAMPCIRCARCADACPVNLQPQELYWFSKA------------DNFEKAR------DYH 419 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L+ C CT CP + + K ++ Sbjct: 420 LFDCIECGCCTYVCPSDIPLVQYYRYAKSEII 451 >gi|148264252|ref|YP_001230958.1| hypothetical protein Gura_2198 [Geobacter uraniireducens Rf4] gi|146397752|gb|ABQ26385.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 413 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 6/88 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C +CP+Y P + R L + + L+ L Sbjct: 1 MDYVKLINCMRCGMCLPACPTYKETFLETASPRGRVALVRKLQEGELDQSERLLEYLS-- 58 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 C C +CP G+N + +A+ Sbjct: 59 ----LCLDCQACASACPCGVNAGELVAE 82 >gi|160875223|ref|YP_001554539.1| electron transport complex protein RnfC [Shewanella baltica OS195] gi|160860745|gb|ABX49279.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS195] gi|315267416|gb|ADT94269.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS678] Length = 888 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 29/182 (15%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIE 140 R + G L + + A P P VI M H + + Sbjct: 297 RVVTVTGTNVGKPGNYWLPIGTPVDHVLTATEFTPEPDQKVIIG-GPMMGHALANIQV-- 353 Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + L+ S ++ C+ C C+T+CP+ L P L Sbjct: 354 ----PILKGTNCILVPSSQEIGSTPEEKACIRCGECATACPAL-------LLPQQLFWH- 401 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLD 256 + E D + L C C+ CP + + IAK +K + Sbjct: 402 ---------AKAEEYDKAA-SYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADE 451 Query: 257 RK 258 ++ Sbjct: 452 KQ 453 >gi|116695639|ref|YP_841215.1| tungsten-containing formate dehydrogenase alpha subunit [Ralstonia eutropha H16] gi|113530138|emb|CAJ96485.1| Tungsten-containing formate dehydrogenase alpha subunit [Ralstonia eutropha H16] Length = 938 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 51/169 (30%), Gaps = 25/169 (14%) Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD----LVVDM-SHFYSQH 136 G C +C + I G LA + + L DM Y++H Sbjct: 60 GNCRACMVEIQGERVLAPSCCRYPAEGMQVQTESERARRAQRTVLELLQSDMPETDYTRH 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDG-----LYECVMCACCSTSCPSYWWNSDRYL 191 ++ W + + + L C+ C C +C N + Sbjct: 120 NELDQWAAKLEVGKPRFAPRERVAADLSHPAIAVNLDACIQCTRCLRACRDEQVND--VI 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G A+ R + D ++DP + C C Q+CP G Sbjct: 178 GLALRGDEARIVFD------------MDDPMGVSTCVACGECVQACPTG 214 >gi|18312523|ref|NP_559190.1| glycolate oxidase subunit, putative [Pyrobaculum aerophilum str. IM2] gi|18159987|gb|AAL63372.1| glycolate oxidase subunit, putative [Pyrobaculum aerophilum str. IM2] Length = 98 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +CV C C +CP+Y R+ GP + + D + E + Sbjct: 8 EASKCVYCGFCEFACPTYRAVRMRHFGPRGRINLIK-NFDG--KLSKEAYK------GIM 58 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C CP G+ + I K+ L+ Sbjct: 59 TCLLCGACDPQCPAGIKITETIRAFKVYLI 88 >gi|330445752|ref|ZP_08309404.1| iron-sulfur cluster binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489943|dbj|GAA03901.1| iron-sulfur cluster binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 470 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 CV CA C +CP+Y + G L + D C Sbjct: 312 RCVRCAACVNTCPAYRHIGGQSYGSIYSGPIGAVLS-PLLGGYEDFKDLPN------ACS 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + ++ + KI Sbjct: 365 LCRACHDVCPVKIPLSDLLLKHRQIMGEEKI 395 >gi|323141588|ref|ZP_08076471.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413930|gb|EFY04766.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 4/83 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L +C+ C C CP+ + + + DE + + + Sbjct: 200 AFWQSELSKCIRCNACRDICPACSCEQCIFDKSDTPVAGKAYA----DEVEEQMYHIIRA 255 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 RC C + CP+G++ Sbjct: 256 FHVAGRCTGCGECARVCPQGIHL 278 >gi|209809194|ref|YP_002264732.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Aliivibrio salmonicida LFI1238] gi|208010756|emb|CAQ81149.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Aliivibrio salmonicida LFI1238] Length = 424 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 10/91 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C+ CP N D Y GP L E+ E L Sbjct: 24 APANTSFDQCLKCTVCTVYCPVAKENPD-YPGPKQCGPDGERLRFKSPEYFDETLKL--- 79 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ IA + Sbjct: 80 ------CTNCKRCETACPSGVKIGDMIAVAR 104 >gi|238621192|ref|YP_002916018.1| FAD linked oxidase domain protein [Sulfolobus islandicus M.16.4] gi|238382262|gb|ACR43350.1| FAD linked oxidase domain protein [Sulfolobus islandicus M.16.4] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + + + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFRHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|227828997|ref|YP_002830777.1| FAD linked oxidase [Sulfolobus islandicus M.14.25] gi|229586207|ref|YP_002844709.1| FAD linked oxidase domain protein [Sulfolobus islandicus M.16.27] gi|227460793|gb|ACP39479.1| FAD linked oxidase domain protein [Sulfolobus islandicus M.14.25] gi|228021257|gb|ACP56664.1| FAD linked oxidase domain protein [Sulfolobus islandicus M.16.27] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + + + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFRHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|206890812|ref|YP_002248020.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742750|gb|ACI21807.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 388 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +D EC C C CPSY + P + + L E Q E + R Sbjct: 1 MDFFTECNKCGKCKQLCPSYQIFLNESFSPRGRIMLIKTL-----EKQKEIISGEPLKQR 55 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C C CP +N + I K + + Sbjct: 56 IFSCLLCGTCESLCPLDVNVSTLIYKTRAKM 86 >gi|170728253|ref|YP_001762279.1| formate dehydrogenase subunit alpha [Shewanella woodyi ATCC 51908] gi|169813600|gb|ACA88184.1| formate dehydrogenase, alpha subunit [Shewanella woodyi ATCC 51908] Length = 924 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 31/207 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACVKDMK 105 V++ L + + P L S C +C + I+G LA K Sbjct: 14 DVEVTASPDETLWQVAKRQGNKLPHLCFTDSSGYRPDGNCRACMVEIEGERVLAASCLRK 73 Query: 106 DIKGAIAVYPLPHMSVIKDLVVDM------------SHFYSQHRSIEPWLKTVSPKPAKE 153 +G + + + +V+++ SQ ++ + PK + Sbjct: 74 PTQGMVVHSQSSRATRSRKMVMELLLTDQPKQISDSGSHLSQMAQLQDIDASRFPKIEPK 133 Query: 154 LLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + +D L C+ C C +C N +G A + + D DE Sbjct: 134 RVPLTDDSHVAMSVNLDACIQCNLCVRACREVQVND--VIGMANRGRDSAIIFDQSDEMA 191 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCP 238 C C Q CP Sbjct: 192 ES------------SCVACGECVQVCP 206 >gi|325294377|ref|YP_004280891.1| hypothetical protein Dester_0175 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064825|gb|ADY72832.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 413 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + +CV C C T CP + + + + + E ++ Sbjct: 18 IEKCVRCGSCRTVCPVFNVTHEEPSVARGKIFLANMINKGNIKLDKE-------AAGIFN 70 Query: 227 -CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C T + C + CP ++ K I + + +++ Sbjct: 71 LCATCLRCAEICPLKVDYEKIIISARALCVEK 102 >gi|38233626|ref|NP_939393.1| putative iron-sulfur protein [Corynebacterium diphtheriae NCTC 13129] gi|38199886|emb|CAE49552.1| Putative iron-sulfur protein [Corynebacterium diphtheriae] Length = 505 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 43/170 (25%), Gaps = 12/170 (7%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S Q + W Sbjct: 234 NGRMCLTLPETLISVMGIEKIIPTFQDLEVFLQLLPRSSTGERQAPYVSTWSGVTEGDGP 293 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D + L + C+ C+ C CP Y G L Sbjct: 294 KNFHIVLVDNGRTAVLSDEIGREALKCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAIL 353 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + N P Y C + CP + + +++ Sbjct: 354 SPQMTGIKNKHDPNAYLP---YASSLCGRCNEVCPVKIPFTDILLELRHK 400 >gi|219848243|ref|YP_002462676.1| hypothetical protein Cagg_1333 [Chloroflexus aggregans DSM 9485] gi|219542502|gb|ACL24240.1| protein of unknown function DUF224 cysteine-rich region domain protein [Chloroflexus aggregans DSM 9485] Length = 505 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 12/117 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID------SRD 208 L+ + + + L C+ C C +C Y D L P R + R Sbjct: 8 LRRNMTAEDVVNLEACMNCKMCGEACAWYLVTGDEKLHPTHKTGFLRQIYQRYLTVEGRI 67 Query: 209 EF------QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D E+ + C CT +CP G++ + + + D + Sbjct: 68 GGALGLVPTPTVADLKENMQYFWACTACGRCTLACPSGISIRRMVRLARAAYTDSGL 124 >gi|298251497|ref|ZP_06975300.1| protein of unknown function DUF162 [Ktedonobacter racemifer DSM 44963] gi|297546089|gb|EFH79957.1| protein of unknown function DUF162 [Ktedonobacter racemifer DSM 44963] Length = 477 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 18/96 (18%) Query: 164 IDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C+ C C +CP Y Y+GP L+ + I R L Sbjct: 298 FWPSLKCIRCGACMNTCPVYRRSGGLSYGSTYMGPIGLITMPSFDI--------RRYSEL 349 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + +C+ CP +N + I + + ++ Sbjct: 350 P-----FSSTLNGSCSNVCPVHINIHEQIYQWREVM 380 >gi|284030067|ref|YP_003379998.1| formate dehydrogenase subunit alpha [Kribbella flavida DSM 17836] gi|283809360|gb|ADB31199.1| formate dehydrogenase, alpha subunit [Kribbella flavida DSM 17836] Length = 971 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 31/185 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAI---AVYPLPHMSVIKDLVVDMSHFYSQH-RS 138 G+C C ++ G A + + +V+ +L++ Q + Sbjct: 57 GVCRMCVVDTGGRAYAASCIRPCEPGMEVATSTPELERSRAVLAELLLVDQPPREQDPKQ 116 Query: 139 IEPWLKTVSPKPAKELLQSHED-------------RQKIDGLYECVMCACCSTSCPSYWW 185 + + ED C++C C +C Sbjct: 117 TTTADNELLAVADDYFITDIEDLWPGPARGVDTSNPVIEVNHDSCILCDRCVRACDDVQ- 175 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + +G + + R D L+DP C T C +CP G K Sbjct: 176 -GNDVIGRSGKGYSTRIAFD------------LDDPMGQSSCVTCGECVSACPTGALTNK 222 Query: 246 AIAKI 250 AI I Sbjct: 223 AINSI 227 >gi|116624838|ref|YP_826994.1| iron-sulfur cluster binding protein [Candidatus Solibacter usitatus Ellin6076] gi|116228000|gb|ABJ86709.1| iron-sulfur cluster binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 472 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 DR K LY C+ C C +CP Y + + + Sbjct: 301 DRSKRQSLY-CIRCGACLNTCPVYRKIGGHSFPWVYSGPIGAII-------TPQFMGVSH 352 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +P + C + CP ++ K + +++ + Sbjct: 353 EPGLPFASSLCGACGEVCPVKIDIPKVLLELRSDVKKA 390 >gi|148261879|ref|YP_001236006.1| hypothetical protein Acry_2897 [Acidiphilium cryptum JF-5] gi|146403560|gb|ABQ32087.1| protein of unknown function DUF162 [Acidiphilium cryptum JF-5] Length = 473 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 26/102 (25%), Gaps = 19/102 (18%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQA-YRWLIDSRDEFQGERLDN 217 + C+ C+ C CP Y Y GP + + D Q L Sbjct: 308 FRDMLRCIRCSACMNHCPVYLTVGGHAYGSMYSGPMGSVLTPAIFGAD-----QAHLLPT 362 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + +R + Sbjct: 363 AS--------TFCGKCESVCPMKIPLTGMMRHWRERAFERHL 396 >gi|260893718|ref|YP_003239815.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] gi|260865859|gb|ACX52965.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] Length = 402 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 12/108 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K P E+ Q ++ C+ C C C + G ++ R++ Sbjct: 7 KVADPTFRDEIAQKIVPQETRLDFNYCLSCGTCDAGC--------EFKGLVEGMEPRRFM 58 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R G R + L DPF ++ C+ CT CP G+N I I+ Sbjct: 59 ---RKIALGLREEVLNDPF-VWLCNMCGRCTMECPMGINMPNVIRCIR 102 >gi|145219649|ref|YP_001130358.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205813|gb|ABP36856.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeovibrioides DSM 265] Length = 276 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 9/96 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C +CP W + +W+ S + + Sbjct: 158 FWEGEFSRCIKCYACRAACPMCWCRRC-----VVDNNQPQWVNTSSHTLGNLEWNLVRAF 212 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC NC+++CP + + + + Sbjct: 213 HLAGRCVECGNCSEACPVNIPL----HLLNRRMTEE 244 >gi|323478834|gb|ADX84072.1| FAD linked oxidase domain protein [Sulfolobus islandicus HVE10/4] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|323476111|gb|ADX86717.1| FAD linked oxidase domain protein [Sulfolobus islandicus REY15A] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 44/132 (33%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY-----WW 185 +F ++ + K + + ED + C+ C+ C T CP Y W Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + + + ++ + + + CH C CP + + Sbjct: 537 YASKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|284175483|ref|ZP_06389452.1| dehydrogenase, putative [Sulfolobus solfataricus 98/2] gi|261603360|gb|ACX92963.1| FAD linked oxidase domain protein [Sulfolobus solfataricus 98/2] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAVAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|229580699|ref|YP_002839099.1| FAD linked oxidase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011415|gb|ACP47177.1| FAD linked oxidase domain protein [Sulfolobus islandicus Y.G.57.14] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|227831735|ref|YP_002833515.1| FAD linked oxidase domain protein [Sulfolobus islandicus L.S.2.15] gi|284999298|ref|YP_003421066.1| FAD linked oxidase domain protein [Sulfolobus islandicus L.D.8.5] gi|227458183|gb|ACP36870.1| FAD linked oxidase domain protein [Sulfolobus islandicus L.S.2.15] gi|284447194|gb|ADB88696.1| FAD linked oxidase domain protein [Sulfolobus islandicus L.D.8.5] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|227486379|ref|ZP_03916695.1| iron-sulfur cluster-binding protein [Anaerococcus lactolyticus ATCC 51172] gi|227235560|gb|EEI85575.1| iron-sulfur cluster-binding protein [Anaerococcus lactolyticus ATCC 51172] Length = 719 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 18/100 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR------YLGPAILLQAYRWLIDSRDEFQGERLDN 217 ++ C+ C C CP++ Y G L + + DE + ++++ Sbjct: 309 YRQIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTLLTHFLI----DENRANQIES 364 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C + C GL A+ I I+ + + Sbjct: 365 V--------CLQCGRCNEVCGGGLPIAQMIMGIREENVKK 396 >gi|229583549|ref|YP_002841948.1| FAD linked oxidase domain protein [Sulfolobus islandicus Y.N.15.51] gi|228014265|gb|ACP50026.1| FAD linked oxidase domain protein [Sulfolobus islandicus Y.N.15.51] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAIAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|78224437|ref|YP_386184.1| hypothetical protein Gmet_3246 [Geobacter metallireducens GS-15] gi|78195692|gb|ABB33459.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 421 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 7/92 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L +CV C C CP++ + + L+ E + Sbjct: 8 ENELKKCVKCGACRAHCPAFATFGKEPAVARGKVALAQHLLKGDIELDDATYAAMS---- 63 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +C +C + CP + P I + L Sbjct: 64 --KCLLCGSCVEKCPNDV-PTDEIVVVAREAL 92 >gi|15898943|ref|NP_343548.1| dehydrogenase, putative [Sulfolobus solfataricus P2] gi|1707768|emb|CAA69440.1| orf c01038 [Sulfolobus solfataricus P2] gi|13815458|gb|AAK42338.1| Dehydrogenase, putative [Sulfolobus solfataricus P2] Length = 1000 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F ++ + K + + ED + C+ C+ C T CP Y Sbjct: 479 NFRFAIGFVKRLSPGGEVEGFKHVRRYLEDFADYSLM--CIDCSMCVTVCPQYRLIPQWP 536 Query: 191 LGPAILLQAYR-----WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + R + ++ + + + CH C CP + + Sbjct: 537 YAPKGMFDFVRGAVAYYELNGSIDIPDSVIAEIS------GCHKCGLCDGVCPARIPIST 590 Query: 246 AIAKIKMMLLDR 257 + K+ ++ + Sbjct: 591 LLIKLNSLVAKK 602 >gi|325964412|ref|YP_004242318.1| FAD/FMN-dependent dehydrogenase [Arthrobacter phenanthrenivorans Sphe3] gi|323470499|gb|ADX74184.1| FAD/FMN-dependent dehydrogenase [Arthrobacter phenanthrenivorans Sphe3] Length = 948 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P L + + CV C C CPS D L P + R + + Sbjct: 514 DDDPQAHLRHIKTAPPVAEEVDRCVSCGYCEPVCPS----KDITLTPRQRIVTLRAIEAA 569 Query: 207 RDEFQGERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + LE D + C C +CP +N + +I+ Sbjct: 570 RLAGDAALVKELEKDYDYESVQTCAVDGMCQTACPVDINTGLLVKRIRR 618 >gi|168700067|ref|ZP_02732344.1| putative oxidase [Gemmata obscuriglobus UQM 2246] Length = 1013 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 27/92 (29%), Gaps = 12/92 (13%) Query: 166 GLYECVMCACCST------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C C C T CP++ D + P + R L D E E Sbjct: 584 EAARCNGCGDCRTRTPPERMCPAFRSRGDEHATPRGMANMLRVLRDPTAATPDEVRTVAE 643 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP +N K + + K Sbjct: 644 ------LCVNCKMCRDECPAKVNVPKLMLETK 669 >gi|118578964|ref|YP_900214.1| hypothetical protein Ppro_0525 [Pelobacter propionicus DSM 2379] gi|118501674|gb|ABK98156.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pelobacter propionicus DSM 2379] Length = 428 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 22/103 (21%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L +CV C C +CP++ + + + L+D Sbjct: 14 QDQLKKCVKCGACRANCPAFSVFGREPAVARGKVALAQHI--------------LKDDIG 59 Query: 224 LYR--------CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C +C + CP + + + + L ++ Sbjct: 60 LDDQTYLAMSKCLLCGSCVEKCPNDVPTDEIVIAAREALARKR 102 >gi|332296194|ref|YP_004438117.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermodesulfobium narugense DSM 14796] gi|332179297|gb|AEE14986.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermodesulfobium narugense DSM 14796] Length = 501 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 12/114 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------L 203 E RQ + CV C C +C +Y + P + R + Sbjct: 68 RVLSEHRQLKVYMESCVKCGACVNACHTYQGTGELRNIPVMRADLLRRYYKKYFTTQGAI 127 Query: 204 IDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + + LD L++ + Y+C C+ CP G++ A+ + +L+ Sbjct: 128 LGPIVGAERVTLDGLKEMYYYFYQCSQCRRCSYYCPMGIDTAEITRYGREILVQ 181 >gi|315608903|ref|ZP_07883876.1| iron-sulfur cluster-binding protein [Prevotella buccae ATCC 33574] gi|315249430|gb|EFU29446.1| iron-sulfur cluster-binding protein [Prevotella buccae ATCC 33574] Length = 466 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 36/132 (27%), Gaps = 18/132 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + Q R + +L +C+ C C +CP Y Sbjct: 264 TTTYTSHFRQARPGAEMHVVLVDNGRSNMLADE----NHWQTLKCIRCGSCMNTCPVYRR 319 Query: 186 NSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + Y P + L D + C ++C + CP ++ Sbjct: 320 SGGYSYTYFIPGPIGVNLGMLKDP-----------YRYSDNVSACSLCLSCDKVCPSMVD 368 Query: 243 PAKAIAKIKMML 254 P I + L Sbjct: 369 PGSQIYLWRQSL 380 >gi|110801830|ref|YP_697872.1| cysteine-rich domain-contain protein [Clostridium perfringens SM101] gi|110682331|gb|ABG85701.1| iron-sulfur cluster-binding protein [Clostridium perfringens SM101] Length = 370 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP D ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFGDS----------------PKNILRDIYKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|269102346|ref|ZP_06155043.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Photobacterium damselae subsp. damselae CIP 102761] gi|268162244|gb|EEZ40740.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Photobacterium damselae subsp. damselae CIP 102761] Length = 403 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 10/85 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C+ CP N +Y GP L +F E L Sbjct: 9 FDQCIKCTVCTVYCPVAKANP-QYPGPKQCGPDGERLRIKSPDFYDETLKL--------- 58 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ IA + Sbjct: 59 CTNCKRCETACPSGVKIGDLIASAR 83 >gi|107103869|ref|ZP_01367787.1| hypothetical protein PaerPA_01004940 [Pseudomonas aeruginosa PACS2] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTELERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|147678569|ref|YP_001212784.1| hypothetical protein PTH_2234 [Pelotomaculum thermopropionicum SI] gi|146274666|dbj|BAF60415.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum SI] Length = 675 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C CP Y G L L+ D L C Sbjct: 310 QCIRCASCLNVCPVYQQIGGHVFGHVYTGGIGAVL-----TAFFHGLEQSADIQSL--CI 362 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CP ++ + I +++ ++++ Sbjct: 363 GCERCKDFCPGKIDIPRLILELRKRVVEK 391 >gi|303237068|ref|ZP_07323638.1| putative iron-sulfur cluster-binding protein [Prevotella disiens FB035-09AN] gi|302482455|gb|EFL45480.1| putative iron-sulfur cluster-binding protein [Prevotella disiens FB035-09AN] Length = 464 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 14/96 (14%) Query: 162 QKIDGLYECVMCACCSTSCPSYWW---NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C+ C C +CP Y S Y P + L + + Sbjct: 296 PTHWKTAKCIRCGACMNTCPVYRRSMGYSYSYFIPGPIGVNLGMLRNPK----------- 344 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + C ++C CP +NP I + L Sbjct: 345 KHSGNVSACSLCLSCDHVCPTKVNPGSQIYNWRQEL 380 >gi|212711765|ref|ZP_03319893.1| hypothetical protein PROVALCAL_02840 [Providencia alcalifaciens DSM 30120] gi|212685287|gb|EEB44815.1| hypothetical protein PROVALCAL_02840 [Providencia alcalifaciens DSM 30120] Length = 636 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 18/96 (18%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L+ + E+ K C+ C C +CP+ ++L Q W ++ Sbjct: 358 CNCLLVPTQEEMGKKPVEEACIRCGLCVDACPA-----------SLLPQQLYWFSKGKEH 406 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 407 EKAQ-------KHNLFDCIECGACAYVCPSNIPLVQ 435 >gi|326773903|ref|ZP_08233185.1| iron-sulfur cluster-binding protein [Actinomyces viscosus C505] gi|326636042|gb|EGE36946.1| iron-sulfur cluster-binding protein [Actinomyces viscosus C505] Length = 577 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 11/93 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL----Y 225 C+ C C CP Y G + + L D + + Sbjct: 334 CIRCGSCMNICPVYQHTGGHAYGSVYPGPIGSII-------TPQLTQGLADDDPVHTLPF 386 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 387 ASSLCGACGEVCPVKIDIPTILIHLRARSVDVK 419 >gi|325067963|ref|ZP_08126636.1| (4Fe-4S) cluster-containing protein [Actinomyces oris K20] Length = 570 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 11/93 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL----Y 225 C+ C C CP Y G + + L D + + Sbjct: 327 CIRCGSCMNICPVYQHTGGHAYGSVYPGPIGSII-------TPQLTQGLADDDPVHTLPF 379 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 380 ASSLCGACGEVCPVKIDIPTILIHLRARSVDVK 412 >gi|300871548|ref|YP_003786421.1| RnfABCDGE type electron transport complex subunit C [Brachyspira pilosicoli 95/1000] gi|300689249|gb|ADK31920.1| electron transport complex, RnfABCDGE type, C subunit [Brachyspira pilosicoli 95/1000] Length = 435 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 19/90 (21%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y C+ C C+ +CP + ++ + + +RL+ L+ + C Sbjct: 365 YPCIKCGRCANACPLHLSPTE--------------IAHTAKAKIKDRLNALD----IATC 406 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C+ CP + + I K LL R Sbjct: 407 FECGCCSYICPSKIPLVQWIRYGK-DLLRR 435 >gi|296391599|ref|ZP_06881074.1| ferredoxin [Pseudomonas aeruginosa PAb1] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|238756490|ref|ZP_04617795.1| Electron transport complex protein rnfC [Yersinia ruckeri ATCC 29473] gi|238705277|gb|EEP97689.1| Electron transport complex protein rnfC [Yersinia ruckeri ATCC 29473] Length = 552 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 353 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HHLFDCIE 394 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 395 CGACAYVCPSHIPLVQ 410 >gi|227487943|ref|ZP_03918259.1| possible iron-sulfur cluster-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092034|gb|EEI27346.1| possible iron-sulfur cluster-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 507 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 50/184 (27%), Gaps = 32/184 (17%) Query: 93 DGTNTLACVKDMKDIKGAIAVY-PLPHMS---VIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +G L K + + + LP V L+ S + W Sbjct: 244 NGRMCL---TLPKTLISVMGIEKILPTFQDLEVFLQLLPRSSTGERMNPYTSLWTGVTEG 300 Query: 149 KPAKELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSDRYLGPAI 195 + D + L C+ C+ C CP Y Y GP Sbjct: 301 DGPENFHIVLVDNGRTAVLSNETGREALKCIRCSACLNVCPVYERIGGHAYGSIYPGPIG 360 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ + + DP Y C + CP + + + +++ Sbjct: 361 A------ILSPQLTGIKDH----NDPNAFLPYASSLCGRCNEVCPVRIPIVETLLELRNK 410 Query: 254 LLDR 257 +++ Sbjct: 411 KVEK 414 >gi|218893867|ref|YP_002442736.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|218774095|emb|CAW29911.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|152985330|ref|YP_001350814.1| oxidoreductase FAD-binding region [Pseudomonas aeruginosa PA7] gi|150960488|gb|ABR82513.1| oxidoreductase, FAD-binding [Pseudomonas aeruginosa PA7] Length = 941 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVIWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|83594934|ref|YP_428686.1| iron-sulfur cluster binding protein [Rhodospirillum rubrum ATCC 11170] gi|83577848|gb|ABC24399.1| Iron-sulfur cluster binding protein [Rhodospirillum rubrum ATCC 11170] Length = 472 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ CA C CP Y Y GP + + Q L N Sbjct: 308 FQEMLRCIRCAACMNHCPVYGAIGGHAYGWVYPGPMGSVLTPALI----GLEQAADLPNA 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP + + + + +R + Sbjct: 364 S--------TLCGRCEEVCPMRIPLPRMLRHWREKEFERHL 396 >gi|254238494|ref|ZP_04931817.1| hypothetical protein PACG_04643 [Pseudomonas aeruginosa C3719] gi|126170425|gb|EAZ55936.1| hypothetical protein PACG_04643 [Pseudomonas aeruginosa C3719] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|116052919|ref|YP_793236.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|115588140|gb|ABJ14155.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|15599966|ref|NP_253460.1| ferredoxin [Pseudomonas aeruginosa PAO1] gi|254244327|ref|ZP_04937649.1| hypothetical protein PA2G_05180 [Pseudomonas aeruginosa 2192] gi|9951036|gb|AAG08158.1|AE004890_11 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|126197705|gb|EAZ61768.1| hypothetical protein PA2G_05180 [Pseudomonas aeruginosa 2192] Length = 938 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CPS L P + +R + R L+ + Sbjct: 538 DKCIECGFCEPVCPSRGLT----LTPRQRIVLWRDIQAKKRAGVDTTALERDYRYQGIDT 593 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C C Q CP +N + I K++ Sbjct: 594 CAATGLCAQRCPVNINTGELIRKLR 618 >gi|323701251|ref|ZP_08112926.1| putative heterodisulfide reductase, C subunit [Desulfotomaculum nigrificans DSM 574] gi|323533853|gb|EGB23717.1| putative heterodisulfide reductase, C subunit [Desulfotomaculum nigrificans DSM 574] Length = 199 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C T+C L P ++Q R + E L ++ C Sbjct: 33 MCMQCGICPTTCALKEKMD---LSPRRIIQLI------RAGAKDEVLKA----NTMWLCT 79 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C CP+G+ + ++ + ++ I Sbjct: 80 SCYTCACRCPRGVPMMDVMHDLRHLAVENGI 110 >gi|241668674|ref|ZP_04756252.1| D-lactate dehydrogenase (cytochrome) [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877207|ref|ZP_05249917.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843228|gb|EET21642.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 907 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 5/117 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++I ++ + E + + +C+ C C CPS + L P Sbjct: 506 KNILNSDVKLTKDKNLHIKNLKELNSVDEKIDKCMECGFCEPVCPSRNLS----LTPRQR 561 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + +E + + L + D + + C T C CP ++ I K + Sbjct: 562 NTVARKIQTLGNEQKQQWLKDY-DYYGIQTCATTSLCKTRCPVDIDTGDFILSQKKL 617 >gi|167041677|gb|ABZ06422.1| putative FAD-linked oxidase, C-terminal domain protein [uncultured marine microorganism HF4000_009L19] Length = 967 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 27/107 (25%), Gaps = 7/107 (6%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + E + C C T CPSY D Sbjct: 526 RYGVGYRTPEPITFFDYDEHGGLGRAVEMCSGVGACRKTLDGTMCPSYMATRDEAHSTRG 585 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 A R + R G D + D L C C CP G++ Sbjct: 586 RANALRLAMTGRLGETGLGDDGVFDT--LDLCLECRACKAECPVGVD 630 >gi|56420548|ref|YP_147866.1| glycolate oxidase iron-sulfur subunit [Geobacillus kaustophilus HTA426] gi|56380390|dbj|BAD76298.1| glycolate oxidase iron-sulfur subunit [Geobacillus kaustophilus HTA426] Length = 436 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y+CV C C SCP+Y P + R + + + C Sbjct: 17 YDCVQCGYCLPSCPTYLTMKTETQSPRGRINLVRMAAEGHITVNELSVP-------IDLC 69 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C CP + K + +K Sbjct: 70 LGCRACEHVCPSNMEYGKMLELVK 93 >gi|304409460|ref|ZP_07391080.1| protein of unknown function DUF162 [Shewanella baltica OS183] gi|307303818|ref|ZP_07583571.1| protein of unknown function DUF162 [Shewanella baltica BA175] gi|304351978|gb|EFM16376.1| protein of unknown function DUF162 [Shewanella baltica OS183] gi|306912716|gb|EFN43139.1| protein of unknown function DUF162 [Shewanella baltica BA175] Length = 464 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A ++D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKIDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYICPTKVPLDKIIFHHRRLKAEAG 391 >gi|292491510|ref|YP_003526949.1| FAD linked oxidase [Nitrosococcus halophilus Nc4] gi|291580105|gb|ADE14562.1| FAD linked oxidase domain protein [Nitrosococcus halophilus Nc4] Length = 969 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 37/121 (30%), Gaps = 12/121 (9%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAIL 196 + +P L +D+ C C T CPSY + G Sbjct: 534 QQKTPVEPTLSFLDWGKDQGLRGAAARCNGAGVCLKRAGQGTMCPSYMATQEEQHGTRGR 593 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +R ++ S G L L C C CP G++ IA +K L Sbjct: 594 ANVFRQVLASPGGLTGRDSPLL--KEALDLCLACKGCKTECPAGVD----IALMKAEFLQ 647 Query: 257 R 257 + Sbjct: 648 Q 648 >gi|317009318|gb|ADU79898.1| putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) [Helicobacter pylori India7] Length = 434 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 28/88 (31%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C C Y + D P L ++ + LE C Sbjct: 17 CVKCAKCVPGCTIYRIHKDEATSPRGFLDLMCLNAQNKLKLDTNLKHLLET------CFL 70 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C ++CP L I K + + + Sbjct: 71 CTACVETCPFHLPIDTLIEKAREKIAQK 98 >gi|304408661|ref|ZP_07390282.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS183] gi|307305490|ref|ZP_07585238.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica BA175] gi|304352482|gb|EFM16879.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS183] gi|306911793|gb|EFN42218.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica BA175] Length = 882 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 29/174 (16%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 ++ G L + + A P P VI M H + + + Sbjct: 305 NVSKPGNYWLPIGTPVDHVLTATEFTPEPDQKVIIG-GPMMGHALANIQV------PILK 357 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 L+ S ++ C+ C C+T+CP+ L P L Sbjct: 358 GTNCILVPSSQEIGSSPEEKACIRCGECATACPAL-------LLPQQLFWH--------- 401 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 + E D + L C C+ CP + + IAK +K +++ Sbjct: 402 -AKAEEYDKAA-SYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQ 453 >gi|261879899|ref|ZP_06006326.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella bergensis DSM 17361] gi|270333410|gb|EFA44196.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella bergensis DSM 17361] Length = 425 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 10/99 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + L +C+ C C+ CP +YLGP + D + Sbjct: 1 MKKEIQANNISQHNLEQCLKCTICTAYCPVSAVEP-KYLGPKLS---------GPDLERY 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D L C C +CP G++ I + Sbjct: 51 RMKDPKIADDTLKMCLNCKRCEIACPSGVHIGDLIQAAR 89 >gi|297570597|ref|YP_003691941.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2] gi|296926512|gb|ADH87322.1| SNARE associated Golgi protein-related protein [Desulfurivibrio alkaliphilus AHT2] Length = 631 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 19/92 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ C + P + A+R + + + C Sbjct: 259 SGCTRCGACAARCAFLQTSG----LPGEIAAAWRT---GKPQADP------------FAC 299 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CP+ L P + ++ L+ R++ Sbjct: 300 SLCNLCTVVCPEKLKPGDFLLDLRRHLVRRQV 331 >gi|220905387|ref|YP_002480699.1| heterodisulfide reductase, transmembrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|32395696|gb|AAO46099.1| QmoC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869686|gb|ACL50021.1| heterodisulfide reductase, transmembrane subunit, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 393 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP ++ ++ A L D L L+ Sbjct: 24 LKKCYQCATCSVACPL--SPANAPYPRKEMVWASWGLKD-----------KLRGDIDLWL 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH NC+ CP+G PA + + ++ Sbjct: 71 CHNCGNCSDLCPRGAKPADLMGAARNVIYK 100 >gi|332994608|gb|AEF04663.1| Fe-S oxidoreductase [Alteromonas sp. SN2] Length = 1037 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 4/115 (3%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ P + D + C+ C C CPS + L P Sbjct: 549 KGILNPGVILNDDPQAHITHLKPMPAVQDTVDACIECGFCEPQCPSLNYT----LSPRQR 604 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R + ++ + C C +CP G++ + I +I+ Sbjct: 605 IALKRRQTSLTEPAAVNEINEAFSHLAVDSCAATGLCASACPVGIDTGQWIKQIR 659 >gi|332306762|ref|YP_004434613.1| D-lactate dehydrogenase (cytochrome) [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174091|gb|AEE23345.1| D-lactate dehydrogenase (cytochrome) [Glaciecola agarilytica 4H-3-7+YE-5] Length = 971 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 35/116 (30%), Gaps = 34/116 (29%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------------------IDSR 207 +C+ C C CPS D P + +R + D R Sbjct: 539 DKCIECGFCEAVCPS----QDLSYTPRQRIAIWRRIKQLREAESLNAQSKAGELLHPDKR 594 Query: 208 DEFQGERLDNLEDP----------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q E+ +L+ C C Q CP G+N I +++ Sbjct: 595 PDKQKEQQQDLQKELKQLEHDFQYMGADTCAATGLCAQRCPVGINTGDLIRQLRSE 650 >gi|258514958|ref|YP_003191180.1| hypothetical protein Dtox_1700 [Desulfotomaculum acetoxidans DSM 771] gi|257778663|gb|ACV62557.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 683 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 31/124 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + I + C C C +CP+Y S ++L P + R ++ + + G L + Sbjct: 273 WKDIMEGFACAECGRCQANCPAY--LSGKHLSPKHFIHKLRMHVEEKVQVLGPALKQAQL 330 Query: 220 ----------------------------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ C +C + CP I +I+ Sbjct: 331 SNSPVAEMAISSESAEAVMEKTLVPDVFSEAEIWDCTNCASCMEQCPVMNEHVPKIIQIR 390 Query: 252 MMLL 255 L+ Sbjct: 391 QNLV 394 Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 220 DPFRLYRCHTIMNCTQSCP-----KGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP K L+P I K++ M ++ K+ Sbjct: 275 DIMEGFACAECGRCQANCPAYLSGKHLSPKHFIHKLR-MHVEEKV 318 >gi|220935791|ref|YP_002514690.1| electron transport complex, RnfABCDGE type, C subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219997101|gb|ACL73703.1| electron transport complex, RnfABCDGE type, C subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 532 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 18/88 (20%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 HED + C+ C C+ +CP+ Y + + D Sbjct: 366 HEDVAPPGPVMPCIRCGQCAEACPAQLLPQQLYWF-----------------ARAKDFDK 408 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 +D + L+ C C CP + + Sbjct: 409 AQD-YSLFDCIECGCCAYVCPSNIPLVQ 435 >gi|145299426|ref|YP_001142267.1| electron transport complex protein RnfC [Aeromonas salmonicida subsp. salmonicida A449] gi|142852198|gb|ABO90519.1| electron transport complex protein RnfC [Aeromonas salmonicida subsp. salmonicida A449] Length = 753 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 27/159 (16%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV-IKDLVVDMSHFYSQHRSIEPWLKTV 146 G + ++ + + P V + ++ + ++ ++ + Sbjct: 302 DAFKKPGNAWVLLGTPVRWLLQRFELQPEADQRVIMGGPMMGFTLPHAMVPVVKATNCLL 361 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 SP A+ E C+ C+ C+ +CP+ + Y Sbjct: 362 SPTRAELPPPGPEQA--------CIRCSACADACPANLLPQELYWYSRAKEY-------- 405 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E L+ L+ C C CP + + Sbjct: 406 ---DKAEGLN-------LFDCIECGACAWVCPSEIPLVQ 434 >gi|117618643|ref|YP_857145.1| electron transport complex, RnfABCDGE type, C subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560050|gb|ABK36998.1| electron transport complex, RnfABCDGE type, C subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 851 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 27/159 (16%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV-IKDLVVDMSHFYSQHRSIEPWLKTV 146 G + ++ + + P V + ++ + ++ ++ + Sbjct: 302 DAFKKPGNAWVLLGTPVRWLLQRFELQPEADQRVIMGGPMMGFTLPHAMVPVVKATNCLL 361 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 SP A+ E C+ C+ C+ +CP+ + Y Sbjct: 362 SPTRAELPPPGPEQA--------CIRCSACADACPANLLPQELYWYSRAKEY-------- 405 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E L+ L+ C C CP + + Sbjct: 406 ---DKAEGLN-------LFDCIECGACAWVCPSEIPLVQ 434 >gi|51244873|ref|YP_064757.1| glycolate oxidase, iron-sulfur subunit (GlcF) [Desulfotalea psychrophila LSv54] gi|50875910|emb|CAG35750.1| related to glycolate oxidase, iron-sulfur subunit (GlcF) [Desulfotalea psychrophila LSv54] Length = 431 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 26/88 (29%), Gaps = 6/88 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + + + Sbjct: 15 DDQMASCMKCGMCQAVCPVFAETMHEGDVTRGKIALLEQLAREMIKDSDQV------NEK 68 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L +C +C +CP G++ + Sbjct: 69 LTKCLLCGSCAAACPSGVHIMDIFINAR 96 >gi|328951435|ref|YP_004368770.1| iron-sulfur cluster binding protein [Marinithermus hydrothermalis DSM 14884] gi|328451759|gb|AEB12660.1| iron-sulfur cluster binding protein [Marinithermus hydrothermalis DSM 14884] Length = 463 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 25/95 (26%), Gaps = 7/95 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + CV C C +CP Y G ++D L Sbjct: 306 WEVLRCVRCGACLNACPVYRQTGGHAYGWVYSGPIGA-VLDPGLLGLEATLPLP------ 358 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C + CP + K + + + + Sbjct: 359 FASSLCGACFEVCPVRIPIPKLLVTWRQRAVAAGL 393 >gi|192362376|ref|YP_001981502.1| electron transport complex protein RnfC [Cellvibrio japonicus Ueda107] gi|190688541|gb|ACE86219.1| Electron transport complex protein RnfC [Cellvibrio japonicus Ueda107] Length = 786 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 25/86 (29%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ +CP + W + D ERL+ Sbjct: 371 EMPLPPPAQACIRCGLCAEACPVDLLPQQLF-----------WYAQAEDF---ERLE--- 413 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + + Sbjct: 414 -SHNLFDCIECGACAYVCPSSIPLVQ 438 >gi|116748493|ref|YP_845180.1| hypothetical protein Sfum_1051 [Syntrophobacter fumaroxidans MPOB] gi|116697557|gb|ABK16745.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 390 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C+ CP + + ++ + L E ED L+ Sbjct: 22 LNWCMQCGLCTNLCPWRLVSGET--SEQFNIRHMQRLGQMGIEG-------FEDEKILFA 72 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C +CP+G+ + ++ ++ + Sbjct: 73 CSTCGMCQTNCPRGVKIVDNVRTMRTSIVGAGM 105 >gi|119897458|ref|YP_932671.1| iron-sulfur protein [Azoarcus sp. BH72] gi|119669871|emb|CAL93784.1| conserved hypothetical iron-sulfur protein [Azoarcus sp. BH72] Length = 483 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 57/226 (25%), Gaps = 35/226 (15%) Query: 49 YVD-LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL-------AC 100 VD L G VL + + + + +C +G A Sbjct: 192 NVDALIQIGRRVLREKFEVADIGLSGVNFAVAETGTLCLVEN-EGNGRMCTTVPKVHIAI 250 Query: 101 VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK-----ELL 155 K ++ V PL + +S +++ P+ Sbjct: 251 TGIEKVVEKLEHVAPLYSILTRSATGQAVSTYFNMISGPRRGEDKDGPEEVHLVLLDNGR 310 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRD 208 +++ +C+ C C CP Y Y GP + L + Sbjct: 311 SQAYADEQLRKTLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIVSPHMTGLEQTHL 370 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + CP + + + +++ Sbjct: 371 LPTASSL--------------CGACGEVCPVKIPIPELLIRLRGEA 402 >gi|320094210|ref|ZP_08026014.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319978835|gb|EFW10374.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 542 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 13/94 (13%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + + ++ + + L L Sbjct: 344 CIRCGSCMNICPVYQHTSGHAYGSVYPGPIGAILTPQL---TQGMAHDDPVHTLPFASSL 400 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP + + ++ +D K Sbjct: 401 -----CGACGDVCPVKIEIPTILIHLRARTVDEK 429 >gi|307823899|ref|ZP_07654127.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacter tundripaludum SV96] gi|307735193|gb|EFO06042.1| protein of unknown function DUF224 cysteine-rich region domain protein [Methylobacter tundripaludum SV96] Length = 410 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 8/79 (10%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 I EC+ C C SCP++ D + + L+++ ERL Sbjct: 20 PYIPDAAECMRCGICIASCPTFCLFQVDEETPRRRIRTISKILVENLPISADERL----- 74 Query: 221 PFRLYRCHTIMNCTQSCPK 239 L C C CP Sbjct: 75 --HLDNCVQCRACETVCPS 91 >gi|89092705|ref|ZP_01165658.1| electron transport complex protein RnfC [Oceanospirillum sp. MED92] gi|89083217|gb|EAR62436.1| electron transport complex protein RnfC [Oceanospirillum sp. MED92] Length = 1047 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 22/112 (19%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++++ C+ C C CP+ Q W ++ Sbjct: 352 NCVIAATYDEMPPAPAANPCIRCGMCEQVCPAELLP-----------QQLHWFAKGKEFE 400 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDRK 258 + + L+ C C+ CP + + A ++I+ +++ Sbjct: 401 KAKH-------HNLFDCIECGACSYVCPSNIPLVQYYRFAKSEIRAEEAEQR 445 >gi|184199958|ref|YP_001854165.1| putative FAD linked oxidase [Kocuria rhizophila DC2201] gi|183580188|dbj|BAG28659.1| putative FAD-linked oxidase [Kocuria rhizophila DC2201] Length = 1024 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLG 192 R I P + + SH++ + CV C + CPS+ D Sbjct: 501 RGIRPGPGARTFELTPVHAFSHDNGSFGQAVNRCVGVGACRSDSGAMCPSFHATGDEVHS 560 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +++ ++ R E + + E L C + C CP ++ Sbjct: 561 TRGRMRSLAEML--RGEHLTDGWKSQETYEALDLCLSCKACATECPVNVD 608 >gi|298530795|ref|ZP_07018197.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510169|gb|EFI34073.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 441 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 13/93 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C CS+ CP+ P L+ +D + + ++ Sbjct: 29 HLNLCLTCGACSSGCPATGLEGMD---PRKFLRMAALGMD----------EEVTSTPWVW 75 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C +CP +N + + + + + K Sbjct: 76 MCTMCTRCVHACPMQINIPQLVFQARKTWPEEK 108 >gi|126173589|ref|YP_001049738.1| hypothetical protein Sbal_1351 [Shewanella baltica OS155] gi|125996794|gb|ABN60869.1| protein of unknown function DUF162 [Shewanella baltica OS155] Length = 464 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A ++D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKIDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYICPTKVPLDKIIFHHRRLKAEAG 391 >gi|294496596|ref|YP_003543089.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanohalophilus mahii DSM 5219] gi|292667595|gb|ADE37444.1| thiol-driven fumarate reductase, iron-sulfur protein [Methanohalophilus mahii DSM 5219] Length = 353 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 7/99 (7%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + + +CV C C CP + + + + D D R Sbjct: 1 MNDEHRRSILKCVHCGTCRAYCPVFNEYGWESTNARGRMLIAQQIDDDSDIDDSFR---- 56 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 F L C T C Q CP G P + + ++ + Sbjct: 57 ---FSLDTCTTCGICEQMCPSGATPPDVVENARAAVVRK 92 >gi|288931753|ref|YP_003435813.1| CoB--CoM heterodisulfide reductase [Ferroglobus placidus DSM 10642] gi|288894001|gb|ADC65538.1| CoB--CoM heterodisulfide reductase [Ferroglobus placidus DSM 10642] Length = 353 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 11/94 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + D C C C T CP+Y + P + + E E Sbjct: 10 PRKDFFVNCTKCGICLTVCPTYNVTYWEHYSPRGRIVLSQLF-----ELDEEVKK----- 59 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C T C C G+ + I +++ + Sbjct: 60 -SVFTCLTCGYCENICSSGVKFTEEIERVRKQFI 92 >gi|258404547|ref|YP_003197289.1| hypothetical protein Dret_0414 [Desulfohalobium retbaense DSM 5692] gi|257796774|gb|ACV67711.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfohalobium retbaense DSM 5692] Length = 451 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 13/108 (12%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P + + + GL C+ C C++ CP+ L P R + Sbjct: 21 DGPPVSTFTAALRDLLPEAGGLDMCLTCGLCASGCPASGLEG---LDPRKF---LRLIAL 74 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +E + + P+ ++ C C + CP ++ + + + + Sbjct: 75 GLEE------EAINSPW-VWMCTMCQRCIRVCPMQIDIPQLVYQARAR 115 >gi|253577807|ref|ZP_04855079.1| 4Fe-4S ferredoxin [Ruminococcus sp. 5_1_39B_FAA] gi|251850125|gb|EES78083.1| 4Fe-4S ferredoxin [Ruminococcus sp. 5_1_39BFAA] Length = 324 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 4/115 (3%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + + + + + + + L +C+ C C CP+ Sbjct: 167 YDELIGESKDTKDADRFAEVEKIEAMSPEEKFAFFQSQLSKCIRCNACRNVCPACSCRKC 226 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + A + +DS F+ + + RC C++ CP+G+ Sbjct: 227 VFDS-NKFDSAQKANVDS---FEEKMFHIIRAFHVAGRCTDCGECSRVCPQGIPL 277 >gi|220904787|ref|YP_002480099.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869086|gb|ACL49421.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 409 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 13/77 (16%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C CP S ++LGP ++ AY R+ RL L + L+ Sbjct: 8 DHCIACTTCVVHCPVADATS-KFLGPRMIGPAYERF-----------RLLGLNEDPSLHY 55 Query: 227 CHTIMNCTQSCPKGLNP 243 C NC +CP G+ Sbjct: 56 CSNCKNCDITCPHGVPV 72 >gi|14324810|dbj|BAB59737.1| glycolate oxidase subunit [Thermoplasma volcanium GSS1] Length = 381 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQGERL 215 +E I +CV C C + CP+ +S +G + +++ + Sbjct: 1 MNEMELLIQEAGKCVNCGFCESVCPTLPASSFIASIGARGRVDIAKFVYKNG-------- 52 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ Y C C CP G+N K ++I ++ + Sbjct: 53 TVIDPSTSFYSCVDCYACVAVCPAGVNAGKV-SEIGRQIVAK 93 >gi|117921346|ref|YP_870538.1| FAD linked oxidase domain-containing protein [Shewanella sp. ANA-3] gi|117613678|gb|ABK49132.1| FAD linked oxidase domain protein [Shewanella sp. ANA-3] Length = 934 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ E++ Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAEKMRADAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 IDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|152999869|ref|YP_001365550.1| hypothetical protein Shew185_1337 [Shewanella baltica OS185] gi|151364487|gb|ABS07487.1| protein of unknown function DUF162 [Shewanella baltica OS185] Length = 464 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A ++D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKIDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYICPTKVPLDKIIFHHRRLKAEAG 391 >gi|94971919|ref|YP_593959.1| Iron-sulfur cluster binding protein [Deinococcus geothermalis DSM 11300] gi|94553970|gb|ABF43885.1| Iron-sulfur cluster binding protein [Deinococcus geothermalis DSM 11300] Length = 498 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 15/95 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + L +E L Sbjct: 312 RCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAILTPQLLQ--LEEKNANTLP------- 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CP +N + + ++ + K Sbjct: 363 -WASSLCGACYDACPVKINIPEVLLYLRGRITAAK 396 >gi|256393941|ref|YP_003115505.1| FAD linked oxidase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256360167|gb|ACU73664.1| FAD linked oxidase domain protein [Catenulispora acidiphila DSM 44928] Length = 976 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 CV C ++ CPS+ D + + ++D R G R + D Sbjct: 546 RRCVGVGKCRSAVGGVMCPSFRATGDEKDSTRGRARVLQEMLDGRTVSDGYRAPEVLDA- 604 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 L C C CP G++ Sbjct: 605 -LDLCLGCKGCKTDCPVGVD 623 >gi|227501669|ref|ZP_03931718.1| possible iron-sulfur cluster-binding protein [Corynebacterium accolens ATCC 49725] gi|227077694|gb|EEI15657.1| possible iron-sulfur cluster-binding protein [Corynebacterium accolens ATCC 49725] Length = 501 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 15/97 (15%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +C+ C+ C CP Y Y GP + S D+ + Sbjct: 323 HQALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI---------SLTPQLTGMKDHND 373 Query: 220 DPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L Y C C CP + + I + + + Sbjct: 374 PSASLPYACSLCGRCDDVCPVKIPLSDVIVENRHQKV 410 >gi|217974168|ref|YP_002358919.1| hypothetical protein Sbal223_3010 [Shewanella baltica OS223] gi|217499303|gb|ACK47496.1| protein of unknown function DUF162 [Shewanella baltica OS223] Length = 464 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C+ C C +CP Y + Y P + A ++D + Sbjct: 312 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIA--------------VGAKIDDTNSIA 357 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CT CP + K I + + + Sbjct: 358 WACTLCGSCTYICPTKVPLDKIIFHHRRLKAEAG 391 >gi|317123960|ref|YP_004098072.1| iron-sulfur cluster binding protein [Intrasporangium calvum DSM 43043] gi|315588048|gb|ADU47345.1| iron-sulfur cluster binding protein [Intrasporangium calvum DSM 43043] Length = 500 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 15/97 (15%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + R Sbjct: 334 RQALRCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAV----LNPQLRGTASD------I 383 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y C +CP +N + + +++ ++ Sbjct: 384 DKSLPYASSLCGACFDACPVRINIPELLVELRGTVVK 420 >gi|284007515|emb|CBA73011.1| Electron transport complex protein rnfC [Arsenophonus nasoniae] Length = 586 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 30/99 (30%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ Y W ++ + E + L C Sbjct: 380 CIRCGLCTQACPANLLPQQLY-----------WFSRGQEHEKAE-------KYNLSDCIE 421 Query: 230 IMNCTQSCPKGLNPA----------KAIAKIKMMLLDRK 258 C CP + KAIA+ K D K Sbjct: 422 CGACAYVCPSNIPLVQYYRQEKAEIKAIAREKQRASDAK 460 >gi|119385650|ref|YP_916705.1| iron-sulfur cluster binding protein [Paracoccus denitrificans PD1222] gi|119376245|gb|ABL71009.1| iron-sulfur cluster binding protein [Paracoccus denitrificans PD1222] Length = 471 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 25/100 (25%), Gaps = 21/100 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGE 213 + + C+ C C C Y Y GP + L SRD Sbjct: 303 ADEFREMLRCIRCGACMNHCVVYRQIGGHAYGGTYPGPMGSVLTPVLDGLAASRDLPNA- 361 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + CP G+ + + Sbjct: 362 -------------CTMNGRCAEVCPVGIPLPTLLRAWRRR 388 >gi|322371846|ref|ZP_08046389.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haladaptatus paucihalophilus DX253] gi|320548731|gb|EFW90402.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Haladaptatus paucihalophilus DX253] Length = 442 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 10/101 (9%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E G +C C+ C T CP + D + GP ++++ +R ++ Sbjct: 21 EPLDLRPGSDDCYKCSTCDTECPVAEVDDD-FPGPK---------FQGPEQWRLKRKEDQ 70 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + C M C CP + + + ++ ++ Sbjct: 71 DIDDSIMSCSNCMRCDSVCPSDVPLSGMHNTARGEYVEEEM 111 >gi|152974829|ref|YP_001374346.1| iron-sulfur cluster-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|259495060|sp|A7GMJ3|LUTB_BACCN RecName: Full=Lactate utilization protein B gi|152023581|gb|ABS21351.1| iron-sulfur cluster binding protein [Bacillus cytotoxicus NVH 391-98] Length = 473 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ D+++ Y Sbjct: 310 QCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVLSPLLGGYDDYKEL----------PY 359 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 360 ASSLCGACTEACPVKIPLHDLLLKHRQVIVEK 391 >gi|332703313|ref|ZP_08423401.1| Lactate utilization protein B/C [Desulfovibrio africanus str. Walvis Bay] gi|332553462|gb|EGJ50506.1| Lactate utilization protein B/C [Desulfovibrio africanus str. Walvis Bay] Length = 719 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 19/145 (13%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK--ELLQSHEDRQKIDGLYEC 170 + LP + +++ ++ + + S + + C Sbjct: 254 IRVLPKNATGQNITSYVTWITGANECASCPDQKKVMHVVFLDNGRSSMAKHESYKEVLRC 313 Query: 171 VMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 V C C+ CP Y D Y+G L+ Y + E+ L + Sbjct: 314 VRCGACANVCPVYRLVGGHEYGDVYIGAIGLILTYFFHN-------KEKAKAL-----VQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKI 250 C C + C G++ + I ++ Sbjct: 362 NCVNCQACKEICASGIDLPRIIKEV 386 >gi|299134802|ref|ZP_07027994.1| formate dehydrogenase, alpha subunit [Afipia sp. 1NLS2] gi|298590612|gb|EFI50815.1| formate dehydrogenase, alpha subunit [Afipia sp. 1NLS2] Length = 922 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 46/178 (25%), Gaps = 37/178 (20%) Query: 81 REGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVI 122 +G C +C + I+G LA K + + + V P Sbjct: 45 ADGNCRACMVEIEGERVLAASCMRMPTVGMKVKSASERAKSARKMVMELLVADQPERETS 104 Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 D H+ + E L C+ C C +C Sbjct: 105 HDPDSKFWHWADKVEVTESRFPAAERWSGDHSHP-----AMSVNLDACIQCGLCVRACRE 159 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + + D +DP C C Q+CP G Sbjct: 160 VQVND--VIGMAYRNHDAKIVFD------------FDDPMGESTCVACGECVQACPTG 203 >gi|186474158|ref|YP_001861500.1| iron-sulfur cluster binding protein [Burkholderia phymatum STM815] gi|184196490|gb|ACC74454.1| iron-sulfur cluster binding protein [Burkholderia phymatum STM815] Length = 481 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 65/273 (23%), Gaps = 44/273 (16%) Query: 2 VEIMLPKRSRVKRGKIWNAPTGEKNLKEYRI--YRWNPDNKGNPCMDTYYVDLDNCGPMV 59 V++ K S + I L E I R+ D +L G Sbjct: 147 VQLAHEKPSHIVMPAIHKTKADIAELFEQHIPDTRYTEDVD----------ELIRTGRRA 196 Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 L + + + + +T + + V L H+ Sbjct: 197 LRRAFVDADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPNVHIAIMGMEKVVAKLSHI 256 Query: 120 SVIKDLVVDMSH-----FYSQHRSIEPWLKTVSPKPAKEL------LQSHEDRQKIDGLY 168 + L+ + Y + + ++ Sbjct: 257 VPLSSLLTRSATGQAITTYFNLITGPRREGERDGPREMHVVLLDNGRTQAYADDQLRATL 316 Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L ++ D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLEETADLPTASSL------ 370 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 371 --------CGACGEVCPVRIPIPELLVRLRTEA 395 >gi|323475570|gb|ADX86176.1| conserved hypothetical protein [Sulfolobus islandicus REY15A] Length = 383 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSGVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC + CP +N K + +K K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFFMMK 377 >gi|323699188|ref|ZP_08111100.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. ND132] gi|323459120|gb|EGB14985.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans ND132] Length = 380 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 11/89 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL---IDSRDEFQGERLDNLEDPF 222 + C++C C +CP LGP R L D E RL L Sbjct: 8 HVSHCILCGKCLQACPLLKATGREELGPRSKSDLCRVLAEDPDKLSETDAARLAGL---- 63 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + C +G + +A ++ Sbjct: 64 ----CLGCGRCREVCSQGQDVPGLVAALR 88 >gi|323144839|ref|ZP_08079408.1| electron transport complex, RnfABCDGE type, C subunit [Succinatimonas hippei YIT 12066] gi|322415364|gb|EFY06129.1| electron transport complex, RnfABCDGE type, C subunit [Succinatimonas hippei YIT 12066] Length = 633 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 31/113 (27%), Gaps = 24/113 (21%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 V+ S ++ C+ C C+ CPS YR Sbjct: 354 IPVTKSCTCLFTPSEKELPPAGIERNCIRCGRCARVCPSRLVP-------------YRMY 400 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA------KAIAKI 250 S+ + L+ + C C CP + KAI +I Sbjct: 401 ALSKAGDHKKTLNC-----GIKDCTECGCCAYVCPSKIPLTSQFRKEKAIIRI 448 >gi|296271195|ref|YP_003653827.1| iron-sulfur cluster binding protein [Thermobispora bispora DSM 43833] gi|296093982|gb|ADG89934.1| iron-sulfur cluster binding protein [Thermobispora bispora DSM 43833] Length = 479 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 24/99 (24%), Gaps = 17/99 (17%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + L Sbjct: 312 RQALHCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAI----LSPQLTGVAANRTLP--- 364 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C CP ++ + ++ + + Sbjct: 365 -----FASTLCGACYDVCPVRIDIPGVLVHLRRAAVAAR 398 >gi|323478282|gb|ADX83520.1| conserved hypothetical protein [Sulfolobus islandicus HVE10/4] Length = 383 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSGVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC + CP +N K + +K K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFFMMK 377 >gi|238760426|ref|ZP_04621565.1| Electron transport complex protein rnfC [Yersinia aldovae ATCC 35236] gi|238701378|gb|EEP93956.1| Electron transport complex protein rnfC [Yersinia aldovae ATCC 35236] Length = 536 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y DE + R L+ C Sbjct: 353 CIRCGLCVDACPAGLLPQQLYWFSRG------------DEHEKAR------NHNLFDCIE 394 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 395 CGACAYVCPSNIPLVQ 410 >gi|227831243|ref|YP_002833023.1| protein of unknown function DUF162 [Sulfolobus islandicus L.S.2.15] gi|229581207|ref|YP_002839606.1| protein of unknown function DUF162 [Sulfolobus islandicus Y.N.15.51] gi|229585718|ref|YP_002844220.1| hypothetical protein M1627_2316 [Sulfolobus islandicus M.16.27] gi|238620682|ref|YP_002915508.1| protein of unknown function DUF162 [Sulfolobus islandicus M.16.4] gi|227457691|gb|ACP36378.1| protein of unknown function DUF162 [Sulfolobus islandicus L.S.2.15] gi|228011923|gb|ACP47684.1| protein of unknown function DUF162 [Sulfolobus islandicus Y.N.15.51] gi|228020768|gb|ACP56175.1| protein of unknown function DUF162 [Sulfolobus islandicus M.16.27] gi|238381752|gb|ACR42840.1| protein of unknown function DUF162 [Sulfolobus islandicus M.16.4] Length = 383 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSGVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC + CP +N K + +K K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFFMMK 377 >gi|74318035|ref|YP_315775.1| electron transport complex protein RnfC [Thiobacillus denitrificans ATCC 25259] gi|74057530|gb|AAZ97970.1| Electron transport complex, RnfABCDGE type, C subunit [Thiobacillus denitrificans ATCC 25259] Length = 558 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 18/100 (18%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + C+ C C+ +CP+ + + D + + Sbjct: 356 KELFPPLPKALPCIRCTRCADACPAELQPQELFRFAKAG-----------DFGRAQ---- 400 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + L+ C C+ CP + K + R Sbjct: 401 ---EYHLFDCIECGCCSYVCPSHIPLVDFYRYAKSEIWAR 437 >gi|256419978|ref|YP_003120631.1| hypothetical protein Cpin_0932 [Chitinophaga pinensis DSM 2588] gi|256034886|gb|ACU58430.1| protein of unknown function DUF162 [Chitinophaga pinensis DSM 2588] Length = 458 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 C+ C C +CP Y G + L +E L Y Sbjct: 310 YCIRCGSCLNACPVYKNIGGHSYGTTYSGPIGSVI--------TPHLQGMESFMHLSYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 NCT+ CP +N + + + ++ Sbjct: 362 SLCGNCTEVCPVRINVHELLLHNRHKAVEE 391 >gi|269793852|ref|YP_003313307.1| (4Fe-4S) cluster-containing protein [Sanguibacter keddieii DSM 10542] gi|269096037|gb|ACZ20473.1| (4Fe-4S) cluster-containing protein [Sanguibacter keddieii DSM 10542] Length = 545 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 +C+ C+ C CP Y G L G DP + Sbjct: 351 KCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAILTPQLTGSTGH-----SDPNSTLPFA 405 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP ++ + ++ ++ Sbjct: 406 STLCGACYEVCPVKIDIPSLLVHLRARTVEE 436 >gi|217973446|ref|YP_002358197.1| electron transport complex protein RnfC [Shewanella baltica OS223] gi|217498581|gb|ACK46774.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS223] Length = 876 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 29/169 (17%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L + + A P P VI M H + + + Sbjct: 310 GNYWLPIGTPVDHVLTATEFTPEPDQKVIIG-GPMMGHALANIQV------PILKGTNCI 362 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L+ S ++ C+ C C+T+CP+ L P L + E Sbjct: 363 LVPSSQEIGSTPEEKACIRCGECATACPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 D + L C C+ CP + + IAK +K +++ Sbjct: 406 EYDKAA-SYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQ 453 >gi|257093527|ref|YP_003167168.1| iron-sulfur cluster-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046051|gb|ACV35239.1| iron-sulfur cluster binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 479 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 26/242 (10%), Positives = 58/242 (23%), Gaps = 22/242 (9%) Query: 26 NLKEYRIYR-WNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84 + + I R + G ++ +L G VL + + + Sbjct: 163 HKTKLEIARLFAAKVPGAAYTESVD-ELIGIGRAVLREKFMTAEIGLSGVNFAVAETGTL 221 Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVD------MSHFYSQHRS 138 C T + V L H+ + L+ ++ +++ S Sbjct: 222 CLVENEGNGRMCTTVPDVHIAITGIEKVVEKLEHVPPLFGLLTRSATGQAITTYFNMISS 281 Query: 139 IEPWLKTVSPKPAK-----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + P+ +++ +C+ C C CP Y G Sbjct: 282 PRKPGEKDGPREMHLVLVDNGRTQAYGDEQLRSTLQCIRCGACMNHCPVYTRIGGHAYGT 341 Query: 194 AILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + L C + CP + + +++ Sbjct: 342 TYPGPIGDIISPHMLGLAATHVLPTASS--------LCGACGEVCPVRIPIPDVLIRLRG 393 Query: 253 ML 254 Sbjct: 394 EA 395 >gi|114320791|ref|YP_742474.1| FAD linked oxidase domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227185|gb|ABI56984.1| FAD linked oxidase domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 1288 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 19/217 (8%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ ++ I +D + L R I G G+ + L + + + Sbjct: 704 NIPVNSNDYEMMHEADRI---VDQVMALARRLGGVISGEHGIGLTKMQYLDQEQIDRFAE 760 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V P + ++ + + ++ + + L D + Sbjct: 761 YKQKVDPEQRF--NRGKLMQGTSLERAYTPSLRLVQQEALIMEQSELGELND-----DIK 813 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++++A+ + +R E D Sbjct: 814 DCLRCGKCKPVCTTHVPRANLHYSPRNKILATGLVIEAFLYEEQTRRGISLEHFAEANDI 873 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ K++ +L R Sbjct: 874 --ADHCTICHRCEKPCPVNIDFGDVTIKMRNILKQRG 908 >gi|121534776|ref|ZP_01666596.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] gi|121306571|gb|EAX47493.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] Length = 431 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 Q D L C+ C C CP Y L + + + F +R L Sbjct: 11 AQISDALANCMKCGNCMEVCPVYKELKTETGVARGKLALLEAVNNGQLGFT-DRFAKLMT 69 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + +C CP G+ + I + + + + Sbjct: 70 V-----CTSCKSCAMKCPCGVKADELIVRGREAAVKAR 102 >gi|23015487|ref|ZP_00055262.1| COG1139: Uncharacterized conserved protein containing a ferredoxin-like domain [Magnetospirillum magnetotacticum MS-1] Length = 478 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 27/93 (29%), Gaps = 17/93 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ CA C CP Y S Y GP L Q E LD D Sbjct: 313 RCIRCAACMNHCPVYTRVGGHTYSFTYPGPIGKLL----------TPQLEGLDCAGDQPH 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + + +++ + Sbjct: 363 AS--TLCRACADVCPVKIPIPDLLVRLRTESVR 393 >gi|332795753|ref|YP_004457253.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] gi|332693488|gb|AEE92955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] Length = 619 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 18/130 (13%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++ DL+ ++ + Y R + S S E ++ C++C C Sbjct: 235 NISFDLIKNVKYAYFTFRGNSAYYVVSSDIKLDITSISQE--YSLEKFNGCILCGKCVDI 292 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP + P L + ++ CH C + CP Sbjct: 293 CPHSYQRGSPIFSPLGFFA----------------LSAIGKEAQVSNCHLCGICEEVCPV 336 Query: 240 GLNPAKAIAK 249 LN + + Sbjct: 337 DLNIVDLLRQ 346 >gi|146304310|ref|YP_001191626.1| heterodisulfide reductase subunit C-like protein [Metallosphaera sedula DSM 5348] gi|145702560|gb|ABP95702.1| Heterodisulfide reductase subunit C-like protein [Metallosphaera sedula DSM 5348] Length = 280 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 11/113 (9%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K D + + L C+ C C++ CP+ + GP ++Q + Sbjct: 40 PQDRETAIKFWQAVKSDFRYDEYLRGCLNCGVCTSGCPAAKFYD---FGPREMIQ--YMM 94 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D D+ +++ C C+ CP A I ++ + Sbjct: 95 RDEVDKIWE------FTNKKVWACVQCYTCSMRCPFNNEIAGLIMLLREYSVQ 141 >gi|332662321|ref|YP_004445109.1| NAD(P)H-quinone oxidoreductase subunit I [Haliscomenobacter hydrossis DSM 1100] gi|332331135|gb|AEE48236.1| NAD(P)H-quinone oxidoreductase subunit I [Haliscomenobacter hydrossis DSM 1100] Length = 176 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 14/124 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V SH + + +++ + + H ++ +G C C C+ +CP+ Sbjct: 30 LRVTFSHMFKKSATVQY--PEQVREHSAVFRGQHVLKRDAEGRENCTACGLCAVACPAEA 87 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNP 243 YR E+ + D L RC C ++CPK + Sbjct: 88 ITIVAEERKKGEEHLYR----------EEKYAAVYDINML-RCIFCGLCEEACPKDAIYL 136 Query: 244 AKAI 247 I Sbjct: 137 TDRI 140 >gi|293396260|ref|ZP_06640539.1| electron transport complex protein RnfC [Serratia odorifera DSM 4582] gi|291421240|gb|EFE94490.1| electron transport complex protein RnfC [Serratia odorifera DSM 4582] Length = 558 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 24/90 (26%), Gaps = 18/90 (20%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + ++ + C+ C C +CP+ Y D+ + Sbjct: 363 PTVDEMAPQEPEQSCIRCGLCVDACPAGLLPQQLYWFSRG---------QEHDKARN--- 410 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + + Sbjct: 411 ------HNLFDCIECGACAYVCPSNIPLVQ 434 >gi|21226490|ref|NP_632412.1| heterodisulfide reductase subunit HdrC [Methanosarcina mazei Go1] gi|20904756|gb|AAM30084.1| heterodisulfide reductase subunit HdrC [Methanosarcina mazei Go1] Length = 236 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN---LEDPFR 223 L C+ C C+ SCP A R+ S + + L+N + + Sbjct: 32 LDRCIQCGACTASCP-----------------AARFTDYSPRQIVKKVLENDRSVLESDM 74 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C +C CP+ +P + ++ M ++ I Sbjct: 75 IWSCFYCYSCNMRCPRNNSPVTIVQVLRQMAINEGI 110 >gi|300245727|gb|ADJ93921.1| putative aromatic-degrading BamD [Clostridia bacterium enrichment culture clone BF] Length = 346 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 15/93 (16%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C T CP + R+ + L +E+ ++R Sbjct: 22 FKLCYQCGKCDTVCP--------------WNRVRRFSMRKLIREATFGLTEIENEE-IWR 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C T C CP+ + + + ++ M + Sbjct: 67 CTTCGRCPHQCPRDVQQIQNMVGLRRMAAGYGV 99 >gi|298346323|ref|YP_003719010.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii ATCC 43063] gi|298236384|gb|ADI67516.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii ATCC 43063] Length = 439 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L + L +C+ C C T CP + + QA R+ Sbjct: 3 HHTALDYAKANLARTSLDQCLKCTICETQCPVLRVTPNFSGPKFVGPQAERF-------- 54 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R D L C CT CP+G+ A+ A+ + ++ Sbjct: 55 ---RKGQSVDK-SLDYCSGCSICTTVCPQGVKIAELNAQARAVM 94 >gi|193212606|ref|YP_001998559.1| CoB--CoM heterodisulfide reductase [Chlorobaculum parvum NCIB 8327] gi|193086083|gb|ACF11359.1| CoB--CoM heterodisulfide reductase [Chlorobaculum parvum NCIB 8327] Length = 500 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP+ + + + R + Q ++ L+ C Sbjct: 25 CYQCGKCTAGCPAGGFMDNP------PARIMRLI-------QAGYVEEAMRSDALWYCIG 71 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 M CT CP+ + A + ++ M L I Sbjct: 72 CMTCTSRCPQNMEIAGTMDALREMALKSGI 101 >gi|218886959|ref|YP_002436280.1| hypothetical protein DvMF_1868 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757913|gb|ACL08812.1| protein of unknown function DUF162 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 716 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 13/106 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 ++ + CV C C+ CP Y +G + + +D+ + Sbjct: 298 RRALAQDPLFSQVMRCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGKDKAR 357 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C +C C G++ + I +I+ L + Sbjct: 358 ----------NLVQNCINCESCKSICAGGIDLPRLIKEIRARLSEE 393 >gi|153000587|ref|YP_001366268.1| electron transport complex protein RnfC [Shewanella baltica OS185] gi|151365205|gb|ABS08205.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella baltica OS185] Length = 885 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 25/152 (16%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L + + A P P VI M H + + + Sbjct: 310 GNYWLPIGTPVDHVLTATEFTPEPDQKVIIG-GPMMGHALANIQV------PILKGTNCI 362 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L+ S ++ C+ C C+T+CP+ L P L + E Sbjct: 363 LVPSSQEIGSTPEEKACIRCGECATACPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D + L C C+ CP + + Sbjct: 406 EYDKAA-SYNLKDCIECGCCSYVCPSDIPLVE 436 >gi|119887|sp|P06130|FDHB_METFO RecName: Full=Formate dehydrogenase subunit beta gi|149709|gb|AAA72183.1| formate dehydrogenase B (fdhB) [Methanobacterium formicicum] Length = 399 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +D C+ C C +CP + + I F ER+ ++ Sbjct: 289 YMDDFSRCLKCYGCREACPICYCEDCCLEANNGPDWLSKGEIPPSPMFHLERMLHM---- 344 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C + CP + AK ++ + Sbjct: 345 -VESCTNCGQCEEVCPGEIPLAKIWHEVNAKM 375 >gi|329948280|ref|ZP_08295124.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328522804|gb|EGF49912.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 577 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 11/93 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL----Y 225 C+ C C CP Y G + + L D + + Sbjct: 334 CIRCGSCMNICPVYQHTGGHAYGSVYPGPIGSII-------TPQLTQGLADDDPVHTLPF 386 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 387 ASSLCGACGEVCPVKIDIPTILVHLRARSVDVK 419 >gi|320531993|ref|ZP_08032888.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320135797|gb|EFW27850.1| iron-sulfur cluster-binding protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 523 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 11/93 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL----Y 225 C+ C C CP Y G + + L D + + Sbjct: 334 CIRCGSCMNICPVYQHTGGHAYGSVYPGPIGSII-------TPQLTQGLADDDPVHTLPF 386 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP ++ + ++ +D K Sbjct: 387 ASSLCGACGEVCPVKIDIPTILVHLRARSVDVK 419 >gi|302390999|ref|YP_003826819.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Acetohalobium arabaticum DSM 5501] gi|302203076|gb|ADL11754.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Acetohalobium arabaticum DSM 5501] Length = 956 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 70/263 (26%), Gaps = 36/263 (13%) Query: 11 RVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMV----------- 59 + G + + L +Y I R+ MD Y V+ G Sbjct: 393 KRITGFVEDVAVAPAKLPDY-IRRF------KEIMDKYEVEAIIYGHAGHGNTHPRPLLN 445 Query: 60 ------LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV 113 ++ + I + + G G + D + K Sbjct: 446 LKQEEDIEKMEAIAQDVYELVNELNGTISGEHGDGLLRTDFIEEIYGSMYDLFQKTKEIF 505 Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P ++ K +V R + + + ++ +C C Sbjct: 506 DPEYILNPGKIVVDTTDLLTENLRYGADYETIGVESDLEFATEYQKEV------EKCHGC 559 Query: 174 ACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 + C + CP + + P R LI R ++ E L + C Sbjct: 560 SKCRSVVGTDMCPVFKALGEEKAAPRAKANILRGLISGRLDY-NEYLKSRAFQEVFDLCL 618 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 NC C +N K I + + Sbjct: 619 NCKNCYLECSSEVNIPKLIMEAR 641 >gi|301308035|ref|ZP_07213989.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Bacteroides sp. 20_3] gi|300833505|gb|EFK64121.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Bacteroides sp. 20_3] Length = 923 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L+ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKKAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|298374361|ref|ZP_06984319.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Bacteroides sp. 3_1_19] gi|298268729|gb|EFI10384.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Bacteroides sp. 3_1_19] Length = 923 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L+ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKKAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|262382690|ref|ZP_06075827.1| oxidoreductase [Bacteroides sp. 2_1_33B] gi|262295568|gb|EEY83499.1| oxidoreductase [Bacteroides sp. 2_1_33B] Length = 923 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L+ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKKAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|256838813|ref|ZP_05544323.1| oxidoreductase [Parabacteroides sp. D13] gi|256739732|gb|EEU53056.1| oxidoreductase [Parabacteroides sp. D13] Length = 923 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L+ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKKAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|255012728|ref|ZP_05284854.1| oxidoreductase [Bacteroides sp. 2_1_7] Length = 923 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + +C+ C C CPS L P + YR L + + E +R L+ F Sbjct: 522 IDKCIECGFCEIQCPSRHVT----LTPRQRIVIYRELSALAEQGETNSKRYKELKKAFNY 577 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 578 KGNATCATDGLCATACPVGINTGLLIKELR 607 >gi|119505633|ref|ZP_01627704.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2080] gi|119458576|gb|EAW39680.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2080] Length = 513 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 18/119 (15%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 E + L+ + ++ C+ C C+ +CP+ Y Sbjct: 341 ESSAVPIIKTTNCILVPTEQELPTPPDAQACIRCGLCAEACPASLLPQQLY--------- 391 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W ++D+ Q ER L C C+ CP + + K M+ + K Sbjct: 392 --WYARAKDQEQLER-------HHLADCIECGACSWVCPSHIPLVQYYRAAKGMIKESK 441 >gi|315657164|ref|ZP_07910048.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492267|gb|EFU81874.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 439 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L + L +C+ C C T CP + + QA R+ Sbjct: 3 HHTALDYAKANLARTSLDQCLKCTICETQCPVLRVTPNFSGPKFVGPQAERF-------- 54 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R D L C CT CP+G+ A+ A+ + ++ Sbjct: 55 ---RKGQSVDK-SLDYCSGCSICTTVCPQGVKIAELNAQARAVM 94 >gi|313683116|ref|YP_004060854.1| hypothetical protein Sulku_1994 [Sulfuricurvum kujiense DSM 16994] gi|313155976|gb|ADR34654.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sulfuricurvum kujiense DSM 16994] Length = 425 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ E + C+ C C C + N+D P + D +Q + Sbjct: 1 MEKRELFNFTETSDACIKCGKCIPVCTIHNVNADEVTSPRGFI-------DLLGAYQRGQ 53 Query: 215 LDNLEDPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ + ++ C NCT CPK L I +++ L D+ Sbjct: 54 LELDYNAKAIFESCFLCTNCTDVCPKALPTDMVIEQVRADLADK 97 >gi|163745493|ref|ZP_02152853.1| formate dehydrogenase, alpha subunit [Oceanibulbus indolifex HEL-45] gi|161382311|gb|EDQ06720.1| formate dehydrogenase, alpha subunit [Oceanibulbus indolifex HEL-45] Length = 921 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKD--------------IKGAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G LA + + + L +D+ Sbjct: 47 DGNCRACMVEIEGERVLAASCIREPADGMVVTTNNARAENARKMVMELLLADQPAQDVAH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S ++ + PK ++ + +D L C+ C C +C Sbjct: 107 DKSSHMRDMAALSGVESSRFPKLERDRIPLLDDSHVAMRVNLDACIQCNLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D ++DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPVFD------------IDDPMGASTCVACGECVQACPTG 207 >gi|126460047|ref|YP_001056325.1| hypothetical protein Pcal_1439 [Pyrobaculum calidifontis JCM 11548] gi|126249768|gb|ABO08859.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pyrobaculum calidifontis JCM 11548] Length = 492 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 15/113 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------------S 206 +R + CV C C +CP+Y D + P + R +I Sbjct: 61 NRNVKMAMEVCVHCGICLDNCPTYVQTKDIFNSPVGRAELIRSVIKAESLSGKLFGKAVG 120 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + E+L+ + + Y+C C SCP G++ A ++ ++ + I Sbjct: 121 AVKLTEEQLEKIYTYY--YQCLECRKCAYSCPFGIDQADITRLVREVMYEAGI 171 >gi|78186973|ref|YP_375016.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium luteolum DSM 273] gi|78166875|gb|ABB23973.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium luteolum DSM 273] Length = 276 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 9/96 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C +CP W + +W+ S + L Sbjct: 158 FWEGEFSRCIKCYACRQACPMCWCRRC-----VVDNNQPQWVNTSSHTLGNLEWNLLRAF 212 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC NC+++CP + + + D Sbjct: 213 HLAGRCVECGNCSRACPADIPL----HLLNRRMADE 244 >gi|308274241|emb|CBX30840.1| hypothetical protein N47_E43520 [uncultured Desulfobacterium sp.] Length = 316 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 8/117 (6%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + IE + + + + C+ C C +CP + + + Sbjct: 176 KGIEAYADVKKIEEMAPDKKWE---FFNSVIKNCIRCYACRNACPLCYCPTC-----FVD 227 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +W+ S D L RC C CP G+ + K+ Sbjct: 228 ESQPQWVGKSLDPVDTMTFHILRAYHCAGRCTDCGACETVCPMGIPIRQFTKKLNKD 284 >gi|304389912|ref|ZP_07371869.1| glycerol-3-phosphate dehydrogenase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326805|gb|EFL94046.1| glycerol-3-phosphate dehydrogenase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 439 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L + L +C+ C C T CP + + QA R+ Sbjct: 3 HHTALDYAKANLARTSLDQCLKCTICETQCPVLRVTPNFSGPKFVGPQAERF-------- 54 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R D L C CT CP+G+ A+ A+ + ++ Sbjct: 55 ---RKGQSVDK-SLDYCSGCSICTTVCPQGVKIAELNAQARAVM 94 >gi|227542584|ref|ZP_03972633.1| possible iron-sulfur cluster-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181782|gb|EEI62754.1| possible iron-sulfur cluster-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 507 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 32/184 (17%) Query: 93 DGTNTLACVKDMKDIKGAIAVY-PLPHMS---VIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +G L K + + + LP V L+ S + W Sbjct: 244 NGRMCL---TLPKTLISVMGIEKILPTFQDLEVFLQLLPRSSTGERMNPYTSLWTGVTEG 300 Query: 149 KPAKELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSDRYLGPAI 195 + D + L C+ C+ C CP Y Y GP Sbjct: 301 DGPENFHIVLVDNGRTAVLSNETGREALKCIRCSACLNVCPVYERIGGHAYGSIYPGPIG 360 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ + + DP Y C + CP + + + ++ Sbjct: 361 A------ILSPQLTGIKDH----NDPNAFLPYASSLCGRCNEVCPVRIPIVETLLDLRNK 410 Query: 254 LLDR 257 +++ Sbjct: 411 KVEK 414 >gi|229580138|ref|YP_002838538.1| protein of unknown function DUF162 [Sulfolobus islandicus Y.G.57.14] gi|228010854|gb|ACP46616.1| protein of unknown function DUF162 [Sulfolobus islandicus Y.G.57.14] Length = 383 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 20/91 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSGVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C NC + CP +N K + +K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFF 374 >gi|170290554|ref|YP_001737370.1| Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174634|gb|ACB07687.1| Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 460 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 7/120 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAI 195 ++ + + L R C C C+ CP+ + Sbjct: 341 KNFKRYRVFPKSPHFDSLSLEDLSRVLKMETDRCKKCGFCNVECPTSKAMNRLESRSSRG 400 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + L+ E LD RLY C C+Q CP GL+ + I + + Sbjct: 401 RVTLINSLVSGDPVRPKEVLD------RLYTCVLCGRCSQECPAGLHVQELIVYGRAYAI 454 >gi|300741608|ref|ZP_07071629.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Rothia dentocariosa M567] gi|300380793|gb|EFJ77355.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Rothia dentocariosa M567] Length = 967 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDPFRL 224 CV C C CPS D L P + R + + D ERL + + + Sbjct: 551 DRCVECGYCEPVCPS----KDLTLTPRQRIVLRREIAAAEANGDTKLAERLRQEYEYYGV 606 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP +N + +++ Sbjct: 607 DTCAVDGMCVTRCPVLINTGDLVRRLRAE 635 Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 4/40 (10%) Query: 221 PFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDR 257 + RC C CP L P + I ++ + Sbjct: 547 EEEVDRCVECGYCEPVCPSKDLTLTPRQRIV-LRREIAAA 585 >gi|297618223|ref|YP_003703382.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297146060|gb|ADI02817.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 338 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 22/157 (14%) Query: 116 LPHMSVIKDLV-VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 S+ ++L + + + + + +++L ED + C+ C Sbjct: 174 EKGESLTRELRDILTEKSFDKPQLGAFSTSINTEGLSEKLATMFEDPVWDELASPCMNCG 233 Query: 175 CCSTSCPSYWWN----------------SDRYLGPAILLQAYRWLIDSR--DEFQGERLD 216 C+ CPS + D + P A R D F+ L Sbjct: 234 ICTYLCPSCYCFDIQVKTRGSEGYRFRCWDSCMYPEYTQMAGGHNPRERKQDRFRNRFLH 293 Query: 217 NLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 LE + + + C C CP+G+N I ++ Sbjct: 294 KLEFFCERYGTFLCTGCGRCIVFCPQGINILSIINRL 330 >gi|257452494|ref|ZP_05617793.1| Iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_5R] gi|257466361|ref|ZP_05630672.1| Iron-sulfur cluster-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917517|ref|ZP_07913757.1| iron-sulfur cluster-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|317059035|ref|ZP_07923520.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_5R] gi|313684711|gb|EFS21546.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_5R] gi|313691392|gb|EFS28227.1| iron-sulfur cluster-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 718 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +++C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREMFDCIRCGACLDVCPAFALVGGHVYGSKVYTGGIGTML-THFLVSEERAAEIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + C GL+ A+ I K++ Sbjct: 365 -----CLQCGRCNEVCGGGLHIAEMIMKLREK 391 >gi|225389877|ref|ZP_03759601.1| hypothetical protein CLOSTASPAR_03626 [Clostridium asparagiforme DSM 15981] gi|225044070|gb|EEG54316.1| hypothetical protein CLOSTASPAR_03626 [Clostridium asparagiforme DSM 15981] Length = 441 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +D+ C+ C C + CPS + P ++++A D + E+L+ Sbjct: 354 FTKDQVAAMEPTPCIRCGKCVSVCPSK-------IIPVMMMEAALHN----DCEKFEKLN 402 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +E C +CT CP +A ++ + + Sbjct: 403 GME-------CMECGSCTYVCPAKRPLTQAFKDMRRTVAANR 437 >gi|167626233|ref|YP_001676733.1| D-lactate dehydrogenase (cytochrome) [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596234|gb|ABZ86232.1| D-lactate dehydrogenase (cytochrome) [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 907 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 5/117 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++I ++ + E + + +C+ C C CPS + L P Sbjct: 506 KNILNPDVKLTKDKNLHIKNLKELNSVDEKIDKCMECGFCEPVCPSRNLS----LTPRQR 561 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + +E + + L + D + + C T C CP ++ I K + Sbjct: 562 NTVARKIQTLGNEQKQQWLKDY-DYYGIQTCATTSLCKTRCPVDIDTGDFILSQKKL 617 >gi|147921646|ref|YP_684537.1| fumarate reductase/succinate dehydrogenase Fe-S cluster-binding component (HdrD-like) [uncultured methanogenic archaeon RC-I] gi|110619933|emb|CAJ35211.1| predicted fumarate reductase/succinate dehydrogenase Fe-S cluster-binding component (HdrD-like) [uncultured methanogenic archaeon RC-I] Length = 330 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 30/91 (32%), Gaps = 22/91 (24%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C C CPS + + S D + L P Sbjct: 6 PMNGEMCVKCGICEAVCPSRLSS-----------------LRSLDLDRSGAL-----PEE 43 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C T C SCP+ + KAI +++ + Sbjct: 44 IVNCTTCNRCVASCPRSVPITKAIERMRQSM 74 >gi|78224620|ref|YP_386367.1| heterodisulfide reductase, iron-sulfur binding subunit [Geobacter metallireducens GS-15] gi|78195875|gb|ABB33642.1| Heterodisulfide reductase, iron-sulfur binding subunit, putative [Geobacter metallireducens GS-15] Length = 342 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 23/129 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K K + L ED + C C C+ CP+ D A R Sbjct: 203 KLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCPACHCF-DINDEGGEKKGARRKS 261 Query: 204 ID---------------SRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGL 241 D RD + + F+ Y C C ++CP G+ Sbjct: 262 WDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVDKFDQRLCTGCGRCIRACPVGI 321 Query: 242 NPAKAIAKI 250 + A+ ++ I Sbjct: 322 DIAEILSAI 330 >gi|56962750|ref|YP_174476.1| iron-sulfur protein [Bacillus clausii KSM-K16] gi|81601010|sp|Q5WJE0|LUTB_BACSK RecName: Full=Lactate utilization protein B gi|56908988|dbj|BAD63515.1| iron-sulfur protein [Bacillus clausii KSM-K16] Length = 475 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 7/95 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ CA C CP Y G L E + + Sbjct: 307 FQAALHCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVLT-PLLEGYEDHKELP----- 360 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT +CP + + + K + ++ ++K Sbjct: 361 -YASSLCAACTDACPVKIPLHELLIKHRRVIAEQK 394 >gi|315654914|ref|ZP_07907819.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii ATCC 51333] gi|315490875|gb|EFU80495.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Mobiluncus curtisii ATCC 51333] Length = 439 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L + L +C+ C C T CP + + QA R+ Sbjct: 3 HHTALDYAKANLARTSLDQCLKCTICETQCPVLRVTPNFSGPKFVGPQAERF-------- 54 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R D L C CT CP+G+ A+ A+ + ++ Sbjct: 55 ---RKGQSVDK-SLDYCSGCSICTTVCPQGVKIAELNAQARAVM 94 >gi|89094699|ref|ZP_01167635.1| putative iron-sulfur binding protein [Oceanospirillum sp. MED92] gi|89081045|gb|EAR60281.1| putative iron-sulfur binding protein [Oceanospirillum sp. MED92] Length = 474 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C+ C CP Y Y GP + + + + L N Sbjct: 304 FQDMLRCIRCSSCMNHCPVYGAVGGHSYGWVYPGPMGSVLTPKMI----GIDKAAHLPNA 359 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C + CP + K + + ++ + Sbjct: 360 S--------TSCGKCEEVCPVRIPLPKMMRHWREKEFEKHL 392 >gi|116749234|ref|YP_845921.1| hypothetical protein Sfum_1801 [Syntrophobacter fumaroxidans MPOB] gi|116698298|gb|ABK17486.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 372 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 12/91 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + + C+ C C+ SCP P +++ R L+D R + + Sbjct: 5 KEQIDYCMECGVCTGSCPISRVIPS--FSPRQMIK--RALMD--------RDETVVQSRE 52 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ C T C+ CP ++ + ++ Sbjct: 53 LWACLTCARCSTRCPVQIDFPEFARGLRERA 83 >gi|309792614|ref|ZP_07687075.1| iron-sulfur cluster binding protein [Oscillochloris trichoides DG6] gi|308225336|gb|EFO79103.1| iron-sulfur cluster binding protein [Oscillochloris trichoides DG6] Length = 467 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 35/139 (25%), Gaps = 16/139 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY- 183 L V S R E + +S + C+ C C +CP Y Sbjct: 265 LSVYTSIINGPARPGEADGPEEFHLVLLDNGRSKMLGSQYAEALLCIRCGACLNACPVYQ 324 Query: 184 ----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 Y GP + D D + L L C + CP Sbjct: 325 AIGGHAYGGVYSGPIGAVLTPILQPDLPD------VYLLPQASSL-----CGACQEVCPV 373 Query: 240 GLNPAKAIAKIKMMLLDRK 258 + + + + + Sbjct: 374 RIAIPDLLLRHRADAVKAG 392 >gi|78358280|ref|YP_389729.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220685|gb|ABB40034.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 430 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 14/92 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + ++DP Sbjct: 15 DDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAH----------EMIKDPES 64 Query: 224 LY----RCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +C +C +CP G+ + + Sbjct: 65 VQERVNKCLLCGSCAANCPSGVQIMDIFLRAR 96 >gi|296271670|ref|YP_003654301.1| hypothetical protein Arnit_0128 [Arcobacter nitrofigilis DSM 7299] gi|296095845|gb|ADG91795.1| protein of unknown function DUF162 [Arcobacter nitrofigilis DSM 7299] Length = 454 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 14/94 (14%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP Y + +Y+ P + + ++ + Sbjct: 300 NCIRCGACMNTCPIYRRSGGHSYKYVIPGPIGSNLGAFRNPKEHKSLP-----------F 348 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CT CP ++ + + L + + Sbjct: 349 ACTLCASCTNVCPVKIDLDSQLYAHRQDLAKKHL 382 >gi|260913865|ref|ZP_05920339.1| electron transport complex [Pasteurella dagmatis ATCC 43325] gi|260631952|gb|EEX50129.1| electron transport complex [Pasteurella dagmatis ATCC 43325] Length = 753 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L+ C Sbjct: 377 CIRCSACSDACPVNLMPQQLY-----------WFARSEDHEKSE-------EYALHDCIE 418 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 419 CGLCAYVCPSHIPL---IQYFRQE--KAKI 443 >gi|156741718|ref|YP_001431847.1| hypothetical protein Rcas_1737 [Roseiflexus castenholzii DSM 13941] gi|156233046|gb|ABU57829.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 1024 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 10/135 (7%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL + + P P + Y C C C C + Sbjct: 466 DLASRFEPLVRRFGNAVPVTIGERPTGPVRDIP----ADVAWYAYACSQCGYCIDECDQF 521 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + P R ++ R+++ +D C T C C L Sbjct: 522 YGRGWESQSPRGKWFWLREYMEGREQWNQRMVDT------FIACTTCEMCNLRCSANLPI 575 Query: 244 AKAIAKIKMMLLDRK 258 A K++ L+ + Sbjct: 576 EPAWMKLRGQLITEQ 590 >gi|320159015|ref|YP_004191393.1| putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Vibrio vulnificus MO6-24/O] gi|319934327|gb|ADV89190.1| predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF [Vibrio vulnificus MO6-24/O] Length = 476 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L ++D L Sbjct: 311 QCIRCGACMNHCPVYTKIGGHAYGTVYPGPIGKIISPHLLGLEKTQDLVTASSL------ 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 365 --------CGACGEVCPVRIPIPEMLQRLRREA 389 >gi|209695337|ref|YP_002263266.1| electron transport complex protein RnfC [Aliivibrio salmonicida LFI1238] gi|208009289|emb|CAQ79555.1| electron transport complex protein RnfC [Aliivibrio salmonicida LFI1238] Length = 716 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 18/116 (15%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ + ++ + C+ C+ C+ +CP A+L Q W Sbjct: 353 QIPITKITNCIITPDRKELPLYNHEMACIRCSSCADACPV-----------ALLPQQLYW 401 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 S D + E + L C C CP + + + K + RK Sbjct: 402 YSKSEDYEKCE-------EYHLSDCIECGACAYVCPSEIPLVQYYRQAKSEIYARK 450 >gi|37676923|ref|NP_937319.1| ferredoxin-like domain-containing protein [Vibrio vulnificus YJ016] gi|37201467|dbj|BAC97289.1| uncharacterized conserved protein containing a ferredoxin-like domain [Vibrio vulnificus YJ016] Length = 476 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L ++D L Sbjct: 311 QCIRCGACMNHCPVYTKIGGHAYGTVYPGPIGKIISPHLLGLEKTQDLVTASSL------ 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 365 --------CGACGEVCPVRIPIPEMLQRLRREA 389 >gi|288931932|ref|YP_003435992.1| hypothetical protein Ferp_1568 [Ferroglobus placidus DSM 10642] gi|288894180|gb|ADC65717.1| protein of unknown function DUF162 [Ferroglobus placidus DSM 10642] Length = 357 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWW----NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CP + Y GP + +Y L ++ Sbjct: 278 CVKCGRCQLECPIFQLFGVNWGGVYGGPMGRILSY--------------LITRRAESDIF 323 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + C CP G+ +K + +IKM + Sbjct: 324 LCTSCKKCDYVCPMGIELSKMVRRIKMDV 352 >gi|227828488|ref|YP_002830268.1| hypothetical protein M1425_2237 [Sulfolobus islandicus M.14.25] gi|227460284|gb|ACP38970.1| protein of unknown function DUF162 [Sulfolobus islandicus M.14.25] Length = 383 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 170 CVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y W Y GP + + D + Sbjct: 299 CIRCGRCHFHCPVYRALDGKWGDPPYSGPMGAMWSGVVYNDYKPALL------------- 345 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C NC + CP +N K + +K K Sbjct: 346 --CSHAGNCREVCPMKINIPKVLEYLKSKFFMMK 377 >gi|213026270|ref|ZP_03340717.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 38 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/38 (71%), Positives = 32/38 (84%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 ACCSTSCPS+WWN D+++GPA LL AYR+LIDSRD Sbjct: 1 ACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTET 38 >gi|160935623|ref|ZP_02082998.1| hypothetical protein CLOBOL_00513 [Clostridium bolteae ATCC BAA-613] gi|158441367|gb|EDP19077.1| hypothetical protein CLOBOL_00513 [Clostridium bolteae ATCC BAA-613] Length = 441 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +D+ C+ C C + CPS+ + P +++QA RD+ E + Sbjct: 354 FTKDQVAEMEPSACIRCGKCVSVCPSH-------IIPVMMMQAAL-----RDDC--ETFE 399 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C +CT CP +A +++ + + Sbjct: 400 KLNGME----CMECGSCTYICPAKRPLTQAFKEMRKTVAANR 437 >gi|27367208|ref|NP_762735.1| iron-sulfur cluster binding protein [Vibrio vulnificus CMCP6] gi|27358776|gb|AAO07725.1| iron-sulfur cluster binding protein [Vibrio vulnificus CMCP6] Length = 476 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L ++D L Sbjct: 311 QCIRCGACMNHCPVYTKIGGHAYGTVYPGPIGKIISPHLLGLEKTQDLVTASSL------ 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 365 --------CGACGEVCPVRIPIPEMLQRLRREA 389 >gi|223939159|ref|ZP_03631042.1| iron-sulfur cluster binding protein [bacterium Ellin514] gi|223892208|gb|EEF58686.1| iron-sulfur cluster binding protein [bacterium Ellin514] Length = 464 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 21/96 (21%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLD 216 C+ C C CP + Y GP + R L D Sbjct: 305 QRDALHCIRCGACLNVCPIFRNVGGHTYGTTYSGPVGSVITPHLRGLQD---------WK 355 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +L L CT++CP ++ + + Sbjct: 356 HLSSASSL-----CGACTEACPVKIDLHHHLLHNRR 386 >gi|319940778|ref|ZP_08015117.1| hypothetical protein HMPREF9464_00336 [Sutterella wadsworthensis 3_1_45B] gi|319805660|gb|EFW02441.1| hypothetical protein HMPREF9464_00336 [Sutterella wadsworthensis 3_1_45B] Length = 773 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 44/184 (23%), Gaps = 42/184 (22%) Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 A + + + P+ + K + V E Sbjct: 236 CPLGAVMTLLSWGNRTFRIRSTPNACLRKTGLPC----------------EVCRSVCPEG 279 Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY----------------------LG 192 L C C C +CPS + + Sbjct: 280 LNPTTLETTDLASARCTKCRICIDACPSQALQQSFFTRSSSVIDTLSNRRPLLRAVREMP 339 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 Q R + D+ + L+ RC + C ++CP+G + A ++ Sbjct: 340 TPAPAQQRRQNFNPVDQTFSQTAAVLQAS----RCISCGACVEACPQGNSIPSLTAALRE 395 Query: 253 MLLD 256 L Sbjct: 396 ERLR 399 >gi|74317664|ref|YP_315404.1| heterodisulfide reductase subunit C [Thiobacillus denitrificans ATCC 25259] gi|74057159|gb|AAZ97599.1| heterodisulfide reductase subunit C [Thiobacillus denitrificans ATCC 25259] Length = 210 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 L + E + D + C+ C CS SCP+ + ++ +++ Sbjct: 7 MAERYRNNFLKEIEEQVEMGDWVKMCMQCGVCSGSCPTNFQSAWE------HPPQELFMM 60 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + R + + ++ C + NC CP+ L + I Sbjct: 61 -----IRAGRREEVLTTTSMWNCTSCYNCIVRCPRKLPITHIMHGI 101 >gi|332703317|ref|ZP_08423405.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332553466|gb|EGJ50510.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 428 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 6/91 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C CP + + L+D + R Sbjct: 15 DDQLVGCMRCGMCQAVCPLFAQTGREADVARGKIS----LLDGL--ANEIIRNPAGVKER 68 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L RC C +CP G+ K + +L Sbjct: 69 LDRCLLCGTCEANCPSGVKVLDIFFKARAIL 99 >gi|330883788|gb|EGH17937.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 84 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C+ +CP+Y D GP + + +++ + + RL Sbjct: 19 EHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------H 71 Query: 224 LYRCHTIMNCTQS 236 L RC + NC + Sbjct: 72 LDRCLSCRNCETT 84 >gi|269102877|ref|ZP_06155574.1| predicted L-lactate dehydrogenase Iron-sulfur cluster-binding subunit YkgF [Photobacterium damselae subsp. damselae CIP 102761] gi|268162775|gb|EEZ41271.1| predicted L-lactate dehydrogenase Iron-sulfur cluster-binding subunit YkgF [Photobacterium damselae subsp. damselae CIP 102761] Length = 454 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV CA C +CP+Y Y GP + L+ D+F+ Sbjct: 295 RCVRCAACVNTCPAYRHIGGQSYGSIYSGPIGAV--LSPLLGGYDDFKDL---------- 342 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + + + K + + + KI Sbjct: 343 PYACSLCKACHDVCPVKIPLSDLLLKHRQKMGELKI 378 >gi|289208953|ref|YP_003461019.1| electron transporter subunit C [Thioalkalivibrio sp. K90mix] gi|288944584|gb|ADC72283.1| electron transport complex, RnfABCDGE type, C subunit [Thioalkalivibrio sp. K90mix] Length = 541 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +D + C+ CA C+ CP+ Y + + + Sbjct: 359 TRPQDTPDPGPVMPCIRCAECAAVCPAQLLPQQLYW-----------------QAKAKDF 401 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D ++D + L+ C C CP + + Sbjct: 402 DAIQD-YGLFDCIECGCCAYVCPSNIPLVQ 430 >gi|148262229|ref|YP_001228935.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|148265607|ref|YP_001232313.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146395729|gb|ABQ24362.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] gi|146399107|gb|ABQ27740.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 334 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 47/160 (29%), Gaps = 30/160 (18%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVS-------PKPAKELLQSHEDRQKIDGLYECVMCAC 175 K+L+ + F+S S +P K L + E+ + C C Sbjct: 176 KELLEKRAQFFSDAGSAKPLPPAEPAGESLDLEKIKSWLDNNFENPLWTEIADRCAGCGA 235 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLID---------------SRDEFQGERLDNLED 220 C+ CP+ G A R D RD + + Sbjct: 236 CAFLCPACHCFDIVDEGTEAKG-ARRKSWDACGFAKFTNHASGHNPRDMQNKRYRNRIMH 294 Query: 221 PFRLYR-------CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 F+ Y C C ++CP G++ + +I Sbjct: 295 KFKYYGDKFGQTLCTGCGRCIRACPVGIDIKAVLDEINSK 334 >gi|56962674|ref|YP_174400.1| formate dehydrogenase alpha subunit [Bacillus clausii KSM-K16] gi|56908912|dbj|BAD63439.1| formate dehydrogenase alpha subunit [Bacillus clausii KSM-K16] Length = 985 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 53/199 (26%), Gaps = 29/199 (14%) Query: 55 CGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDG----------TNTLACVKD 103 P L L K P+L S C +C + ++G Sbjct: 17 TNPRSLLTFLAEKKVEVPSLCYHPSLGAIETCDTCIVEVNGEFVRSCSTDIKPGDTIHTK 76 Query: 104 MKDIKGAIAV---YPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LKTVSPKPAKELLQSHE 159 + A + L + + + + H +++ + + + + + Sbjct: 77 SAGVHEAQLIAMDRILGNHELYCTVCDYNNGNCEIHNAVKEMKMTHQETEHSSKKAEVQR 136 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C++C C +C + ++ W S + Sbjct: 137 NAFYRYDPDQCILCGRCVEACQDVQVTETLSIDWSLERPRVIWDKHSPIDES-------- 188 Query: 220 DPFRLYRCHTIMNCTQSCP 238 C +C+ CP Sbjct: 189 ------SCVNCGHCSTVCP 201 >gi|27377428|ref|NP_768957.1| formate dehydrogenase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27350572|dbj|BAC47582.1| formate dehydrogenase alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 922 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 53/218 (24%), Gaps = 43/218 (19%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREG---ICGSCGMNIDGTNTLAC 100 T+ +D + + + + P L + C +C + I+G LA Sbjct: 5 TFELDGKQVEASPGETIWQVAKRQGREIPHLCYSPAPDYRPDGNCRACMVEIEGERVLAA 64 Query: 101 VKD------------------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + + V P D H+ E Sbjct: 65 SCKRTPSVGMKVKTESARAVSAQKMVMELLVADQPARETSHDPDSKFWHWAETTGVTESR 124 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L C+ C C +C N +G A + Sbjct: 125 FPAAERWATDASHP-----AMRVNLDACIQCGLCVRACREVQVND--VIGMAYRSHGSKI 177 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D +DP C C Q+CP G Sbjct: 178 VFD------------FDDPMGESTCVACGECVQACPTG 203 >gi|94314816|ref|YP_588025.1| iron-sulfur cluster binding protein [Cupriavidus metallidurans CH34] gi|93358668|gb|ABF12756.1| Iron-sulfur cluster binding protein; putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain [Cupriavidus metallidurans CH34] Length = 481 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 36/269 (13%) Query: 2 VEIMLPKRSRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLD 61 V++ K S + I L E I PD P + L G L Sbjct: 147 VQLAGEKPSHIVMPAIHKTKADIATLFEQHI----PDT---PYTEDVD-ALIQTGRRALR 198 Query: 62 GLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV 121 + + + + +T + + V L H+ Sbjct: 199 QAFVEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDVHIAVMGMEKVVAKLSHIVP 258 Query: 122 IKDLVVD------MSHFYSQHRSIEPWLKTVSPKPAK-----ELLQSHEDRQKIDGLYEC 170 + L+ ++ +++ S + P+ +++ +C Sbjct: 259 LSSLLTRSATGQPITTYFNLISSPRKPHEQDGPREVHLVLLDNGRSQAYADEQLRATLQC 318 Query: 171 VMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C C CP Y Y GP + + L D L L Sbjct: 319 IRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD-----LATASSL- 370 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 371 ----CGACGEVCPVRIPIPQLLVRLRTEA 395 >gi|289580141|ref|YP_003478607.1| FAD linked oxidase [Natrialba magadii ATCC 43099] gi|289529694|gb|ADD04045.1| FAD linked oxidase domain protein [Natrialba magadii ATCC 43099] Length = 1014 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 6/137 (4%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----C 180 VV + R + + + L + + C C C + C Sbjct: 562 VVYRESEPTDIRDNLRYGPDYATLEPRTALDFDSEGGFSHLVELCNGCGTCRQTDSDVMC 621 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+Y + R I S + D+ L C C CP G Sbjct: 622 PTYRATGEEIATTRGRANLLRAAI-SGELDPEALYDDRFQSEVLDLCIGCKGCQSDCPTG 680 Query: 241 LNPAKAIAKIKMMLLDR 257 ++ AK A++K DR Sbjct: 681 VDLAKLKAEVKHQYYDR 697 >gi|163786753|ref|ZP_02181201.1| hypothetical protein FBALC1_16247 [Flavobacteriales bacterium ALC-1] gi|159878613|gb|EDP72669.1| hypothetical protein FBALC1_16247 [Flavobacteriales bacterium ALC-1] Length = 42 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 1/41 (2%) Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D C C CPKG++ + IA++ L + Sbjct: 1 MDLEGFGNCTNTGACEVECPKGISL-ENIARMNREYLKASL 40 >gi|91772952|ref|YP_565644.1| hypothetical protein Mbur_0952 [Methanococcoides burtonii DSM 6242] gi|91711967|gb|ABE51894.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanococcoides burtonii DSM 6242] Length = 365 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 6/93 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C C C CP + + A + + S D E + Sbjct: 9 WKKELINCTQCGFCKDVCPIFADVEWDSSVARGKM-ALCYGLYSGDIEPDESV-----VE 62 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RLY+C T +CT+ CP + + I+ L+ Sbjct: 63 RLYQCTTCADCTRRCPSSTDVVGVVEAIRKDLV 95 >gi|167624997|ref|YP_001675291.1| FAD linked oxidase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355019|gb|ABZ77632.1| FAD linked oxidase domain protein [Shewanella halifaxensis HAW-EB4] Length = 939 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + +C+ C C +CP+ N A L + R L S + E++ + Sbjct: 539 IDKCIECGFCEKTCPTSALNMSPRQRIATLREIER-LEQSGGKRAAEQMRAAAKYDVVDT 597 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C CT +CP + + + K++ Sbjct: 598 CAACQLCTIACPVDNSMGELVRKLR 622 >gi|226947085|ref|YP_002802158.1| RnfABCDGE type electron transport complex subunit C [Azotobacter vinelandii DJ] gi|17865302|gb|AAL47174.1|AF450501_4 RnfC [Azotobacter vinelandii] gi|226722012|gb|ACO81183.1| Electron transport complex, RnfABCDGE type, C subunit [Azotobacter vinelandii DJ] Length = 496 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 24/91 (26%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C +CP D L D D + L C Sbjct: 368 APCIRCASCVDACPMGLTPLDMALYARA---------DDYDGA---------SEYGLRDC 409 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ CP + K +R+ Sbjct: 410 ILCGCCSYVCPSHIPLVHYFQYAKGQQDERR 440 >gi|310780340|ref|YP_003968672.1| heterodisulfide reductase subunit C-like protein [Ilyobacter polytropus DSM 2926] gi|309749663|gb|ADO84324.1| heterodisulfide reductase subunit C-like protein [Ilyobacter polytropus DSM 2926] Length = 137 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C+ CP+ L I+ RD G+ +E ++ C Sbjct: 28 DCMQCGKCTAGCPA--TGGMDILPHQII----------RDLQLGQVKKVIESKT-IWSCA 74 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C CP+ ++ A+ I +++++ +K Sbjct: 75 SCFACASRCPRNVDLARLIEAARLLIVRKK 104 >gi|322420291|ref|YP_004199514.1| hypothetical protein GM18_2792 [Geobacter sp. M18] gi|320126678|gb|ADW14238.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 413 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CP+Y P + R + + L+ + Sbjct: 1 MDYVKLINCMRCGMCLPHCPTYKETFLETASPRGRVALVRKFQEGELVESEKFLEYVS-- 58 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+N + +A+ + Sbjct: 59 ----LCLDCQACASACPCGVNAGELVAEFR 84 >gi|226362687|ref|YP_002780465.1| iron-sulfur protein [Rhodococcus opacus B4] gi|226241172|dbj|BAH51520.1| putative iron-sulfur protein [Rhodococcus opacus B4] Length = 493 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 43/173 (24%), Gaps = 12/173 (6%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W Sbjct: 240 NGRMCLTLPDTLITLMGIEKLIPKFTDLEVFMQLLPRSSTAERMNPYTSMWTGVHPADGP 299 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + + L C+ C+ C CP Y G L Sbjct: 300 QNFHVILLDNGRTNVLADEVGRSALHCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAIL 359 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 G N P + C +CP ++ + ++ +D Sbjct: 360 SPQLTGTTGHDDPNASLP---FASTLCGACFDACPVRIDIPSILVHLRAEQVD 409 >gi|169343080|ref|ZP_02864107.1| iron-sulfur cluster-binding protein [Clostridium perfringens C str. JGS1495] gi|169298990|gb|EDS81064.1| iron-sulfur cluster-binding protein [Clostridium perfringens C str. JGS1495] Length = 370 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP + ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFGES----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|58039801|ref|YP_191765.1| putative electron transport protein [Gluconobacter oxydans 621H] gi|58002215|gb|AAW61109.1| Putative electron transport protein [Gluconobacter oxydans 621H] Length = 507 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 31/103 (30%), Gaps = 18/103 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +K +C+ C C +CP + Y GP +ID R Sbjct: 338 MEKFWPGLKCIRCGACMNTCPVFRRSGGLSYGATYAGPIG------LIIDPTFNVHKYR- 390 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y +CT CP +N + IA + L Sbjct: 391 ------NLPYSSTMNGSCTNVCPVKINIHEQIADWRKTLAGEG 427 >gi|39996724|ref|NP_952675.1| glycolate oxidase iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|39983605|gb|AAR34998.1| glycolate oxidase iron-sulfur subunit, putative [Geobacter sulfurreducens PCA] gi|298505736|gb|ADI84459.1| D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative [Geobacter sulfurreducens KN400] Length = 416 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C CP+Y P + R + + E L+ L Sbjct: 1 MEYVKLINCMRCGMCLPQCPTYKETFLETASPRGRVALMRKIEEGDLEVSERLLEYLS-- 58 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+N + +A + Sbjct: 59 ----LCLDCQACASACPCGVNAGEMVAGYR 84 >gi|297568437|ref|YP_003689781.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924352|gb|ADH85162.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 415 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 28/90 (31%), Gaps = 8/90 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C CST CP Y Y L L D L C Sbjct: 10 NCAKCGACSTVCPVYRQTGREYHTGRGKLHLLSRL-DPTAAST-------VYAEILSHCL 61 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+Q C + L A+ +A+ + L R Sbjct: 62 LCGACSQVCSRRLPVAEMLAEARGELTRRA 91 >gi|332305199|ref|YP_004433050.1| cytochrome c oxidase accessory protein CcoG [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172528|gb|AEE21782.1| cytochrome c oxidase accessory protein CcoG [Glaciecola agarilytica 4H-3-7+YE-5] Length = 457 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 4/83 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + S + L+ +R E +G R + Sbjct: 199 AACTYINGGWIKEKMCLHICPYARFQSVMFNNSTSLMT----YDHTRGENRGPRKIKAQK 254 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 255 SEELGDCVDCGLCVDVCPVGIDI 277 >gi|325269021|ref|ZP_08135642.1| iron-sulfur cluster binding protein [Prevotella multiformis DSM 16608] gi|324988642|gb|EGC20604.1| iron-sulfur cluster binding protein [Prevotella multiformis DSM 16608] Length = 462 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 14/94 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C +CP Y + Y P + L D + + Sbjct: 299 HWETLKCIRCGACMNTCPVYRRSGGYSYSYFIPGPIGVNLSMLKDPK-----------KH 347 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C ++C CP + P I + + L Sbjct: 348 SGNVSACSLCLSCDCVCPAKVTPGSQIYRWRQSL 381 >gi|220935940|ref|YP_002514839.1| FAD linked oxidase domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997250|gb|ACL73852.1| FAD linked oxidase domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 1289 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG ++++A+ + +R D + D Sbjct: 820 DCLRCGKCKPVCNTHVPRANLLYSPRNKILGTGLIIEAFLYEEQTRRGLSLRHFDEMNDV 879 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ +++ +L R Sbjct: 880 --ADHCTVCHKCANPCPVNIDFGDVTIRMRSILKARG 914 >gi|331697810|ref|YP_004334049.1| iron-sulfur cluster binding protein [Pseudonocardia dioxanivorans CB1190] gi|326952499|gb|AEA26196.1| iron-sulfur cluster binding protein [Pseudonocardia dioxanivorans CB1190] Length = 488 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 19/96 (19%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + + L +ED Sbjct: 326 HCIKCSACLNVCPVYERTGGHAYGSVYPGPIGAVLSPQ-------------LTGVEDNAS 372 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + C + CP ++ + +++ ++ + Sbjct: 373 LPFASSLCGACYEVCPVRIDIPSLLVRLRAQHVEAR 408 >gi|281357469|ref|ZP_06243957.1| electron transport complex, RnfABCDGE type, C subunit [Victivallis vadensis ATCC BAA-548] gi|281316072|gb|EFB00098.1| electron transport complex, RnfABCDGE type, C subunit [Victivallis vadensis ATCC BAA-548] Length = 440 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K +L + G C+ C C CP L P Sbjct: 334 MMGFAQKSFEVPVAKNTSGILLLPVELSMNYGSTGCIRCGRCVEGCPMN-------LIPC 386 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L A + ER D L + C +C CP + + + K + Sbjct: 387 LLGNA----------VEAERFD-LAAQNHVMDCLECGSCAYVCPAHRPLVQHMRRAKAEI 435 Query: 255 LDRK 258 RK Sbjct: 436 RKRK 439 >gi|219669107|ref|YP_002459542.1| hypothetical protein Dhaf_3083 [Desulfitobacterium hafniense DCB-2] gi|219539367|gb|ACL21106.1| protein of unknown function DUF162 [Desulfitobacterium hafniense DCB-2] Length = 717 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 15/112 (13%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDS 206 + ++ +++C+ CA C CP++ G I +L Sbjct: 292 MDNGRRKMYADEQFKQVFQCIRCAACLNVCPAFQLVGGHVYGHIYTGGIGTILTAFLNSE 351 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + L C CT+ C L+ I +I+ + D+K Sbjct: 352 KDAENPQNL-----------CLQCGKCTEVCAGKLDIPGMILEIRNRIGDQK 392 >gi|303326320|ref|ZP_07356763.1| putative heterodisulfide reductase, transmembrane subunit [Desulfovibrio sp. 3_1_syn3] gi|302864236|gb|EFL87167.1| putative heterodisulfide reductase, transmembrane subunit [Desulfovibrio sp. 3_1_syn3] Length = 394 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS +CP ++ ++ A L D L L+ Sbjct: 24 LKKCFQCATCSVACPL--APANAPYPRKEMVWASWGLKD-----------KLRADVDLWL 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CH NC+ CP+G PA +A + ++ Sbjct: 71 CHNCGNCSDLCPRGAKPADMMAAARNVIYK 100 >gi|253989598|ref|YP_003040954.1| electron transport complex protein RnfC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781048|emb|CAQ84210.1| electron transport complex protein rnfc [Photorhabdus asymbiotica] Length = 706 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 42/153 (27%), Gaps = 20/153 (13%) Query: 94 GTNTLACVKDMKDIKGAIA-VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 G N + + + + L + +V M ++ V Sbjct: 301 GDNVTSPGNFWARLGTPVQFLLQLAGFEPQSEQMVIMGGPL-MGFTLPDLNVPVVKISNC 359 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 L+ SH++ C+ C C +CP+ Y SR + Sbjct: 360 ILVPSHQEMDANTAEEACIRCGLCVEACPASLLPQQLYWF-------------SRGQEHE 406 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 407 KARN-----HNLFDCIECGACAYVCPSNIPLVQ 434 >gi|212639832|ref|YP_002316352.1| hypothetical protein Aflv_2008 [Anoxybacillus flavithermus WK1] gi|259495164|sp|B7GLD5|LUTB_ANOFW RecName: Full=Lactate utilization protein B gi|212561312|gb|ACJ34367.1| Uncharacterized conserved protein containing a ferredoxin-like domain [Anoxybacillus flavithermus WK1] Length = 472 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + +++R Sbjct: 364 TLCAACTEACPVKIPLHELLLKHRQTIVER 393 >gi|209521501|ref|ZP_03270205.1| protein of unknown function DUF162 [Burkholderia sp. H160] gi|209498061|gb|EDZ98212.1| protein of unknown function DUF162 [Burkholderia sp. H160] Length = 467 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + + +C+ C C +CP Y + G Sbjct: 272 YTSHFRAPRPGTEMHFILVDHGRVERLAMEDFWYSLKCIRCGACMNTCPVYRRSGGLSYG 331 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 332 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRA 383 Query: 253 MLLDR 257 ++ ++ Sbjct: 384 VIAEQ 388 >gi|315452978|ref|YP_004073248.1| iron-sulfur cluster binding protein [Helicobacter felis ATCC 49179] gi|315132030|emb|CBY82658.1| iron-sulfur cluster binding protein [Helicobacter felis ATCC 49179] Length = 481 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 17/93 (18%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C CP Y Y GP ++ + D + E + NL Sbjct: 308 YYRALSCIRCGTCLNHCPVYDKIGGHAYLATYPGPIGVVITPQLF--GLDNY--EHIANL 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + I ++ Sbjct: 364 --------CSLCGRCGEVCPVKIPLPELIRDLR 388 >gi|312113527|ref|YP_004011123.1| iron-sulfur cluster binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311218656|gb|ADP70024.1| iron-sulfur cluster binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 499 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 21/95 (22%), Gaps = 17/95 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + L N Sbjct: 327 FQDMLRCIRCGACLNHCPVYAAVGGHAYGSVYPGPMGAV----LTPQLTGIHDAAHLPNA 382 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C CP + K + + Sbjct: 383 S--------TFCGRCQAVCPMHIPLPKMMRHWRER 409 >gi|89894667|ref|YP_518154.1| hypothetical protein DSY1921 [Desulfitobacterium hafniense Y51] gi|89334115|dbj|BAE83710.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 717 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 15/112 (13%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDS 206 + ++ +++C+ CA C CP++ G I +L Sbjct: 292 MDNGRRKMYADEQFKQVFQCIRCAACLNVCPAFQLVGGHVYGHIYTGGIGTILTAFLNSE 351 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +D + L C CT+ C L+ I +I+ + D+K Sbjct: 352 KDAENPQNL-----------CLQCGKCTEVCAGKLDIPGMILEIRNRIGDQK 392 >gi|254462393|ref|ZP_05075809.1| formate dehydrogenase, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206678982|gb|EDZ43469.1| formate dehydrogenase, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 925 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 48/184 (26%), Gaps = 27/184 (14%) Query: 70 IDPTLTLRRSCREGIC-----------GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 P R C SC + + + + + V L Sbjct: 38 HKPQPGYRPDGNCRACMVEVEGERTLVASCIREANEGMVVTTNSNRAESARKMVVEMLLA 97 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACC 176 +D+ D S ++ PK + + +D L C+ C C Sbjct: 98 DQPERDVSHDKSSHLWDMAEANGIDQSRFPKLEEGHIPLLDDSHVAMSVSLDACIQCGLC 157 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 +C N +G + Q D L DP C C Q+ Sbjct: 158 VRACREVQVND--VIGMSGRGQNAYPTFD------------LADPMGDSTCVACGECVQA 203 Query: 237 CPKG 240 CP G Sbjct: 204 CPTG 207 >gi|171185542|ref|YP_001794461.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934754|gb|ACB40015.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 392 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 12/84 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CPSY D P LQ + S DE + C Sbjct: 12 SACMRCGNCVDVCPSYVATGDLRNSPMGRLQLLKGA--SWDELTR----------SFHLC 59 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C CP G++ A+ +I+ Sbjct: 60 TMCKRCAYFCPTGIDVAEVTRQIR 83 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 5/23 (21%), Positives = 7/23 (30%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKA 246 + C NC CP + Sbjct: 11 VSACMRCGNCVDVCPSYVATGDL 33 >gi|238790209|ref|ZP_04633985.1| Electron transport complex protein rnfC [Yersinia frederiksenii ATCC 33641] gi|238721747|gb|EEQ13411.1| Electron transport complex protein rnfC [Yersinia frederiksenii ATCC 33641] Length = 567 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 353 CIRCGLCVDACPASLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 394 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 395 CGACAYVCPSNIPLVQ 410 >gi|91773125|ref|YP_565817.1| FAD linked oxidase-like protein [Methanococcoides burtonii DSM 6242] gi|91712140|gb|ABE52067.1| cysteine-rich domain protein/FAD binding domain protein containing heterodisulfide reductase iron-sulfur subunit like C-terminal region [Methanococcoides burtonii DSM 6242] Length = 1015 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 6/103 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 Q + + Y C C C C Y+ P + + RD+ Sbjct: 489 FTKQKDIEADIVSHAYTCAQCGYCVEECDQYYGRGWESQSPRGKWFFIKEYLAGRDKMTQ 548 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E++D C T C C L + ++ L+ Sbjct: 549 EQVDT------FLACTTCELCDHRCQLDLPINDSWMTLRKELV 585 >gi|295699631|ref|YP_003607524.1| hypothetical protein BC1002_4005 [Burkholderia sp. CCGE1002] gi|295438844|gb|ADG18013.1| protein of unknown function DUF162 [Burkholderia sp. CCGE1002] Length = 467 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + + +C+ C C +CP Y + G Sbjct: 272 YTSHFRAPRPGTEMHFILVDHGRSERLAMEDFWFSLKCIRCGACMNTCPVYRRSGGLSYG 331 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + F +R L + +CT CP +N + I K + Sbjct: 332 GTYSGPIGAIIN---PTFDLKRYSALP-----FASTLNGSCTNVCPVKINIHEQIYKWRA 383 Query: 253 MLLDR 257 ++ ++ Sbjct: 384 VIAEQ 388 >gi|284172761|ref|YP_003406143.1| FAD linked oxidase domain protein [Haloterrigena turkmenica DSM 5511] gi|284017521|gb|ADB63470.1| FAD linked oxidase domain protein [Haloterrigena turkmenica DSM 5511] Length = 996 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 41/136 (30%), Gaps = 5/136 (3%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS----CP 181 VV + R + + + L ++ + C C C + CP Sbjct: 548 VVYTDENPTDMRENLRYGAGYTSIEPQTKLDFTDEGGFSQLVELCNGCGTCRQTDDVMCP 607 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 +Y D R I S + + E L C C CP G+ Sbjct: 608 TYRGMKDEIATTRGRANMLRAAI-SGEIDEEEMYSERFQEEVLDLCVGCKGCKSDCPTGV 666 Query: 242 NPAKAIAKIKMMLLDR 257 + AK A+ K +R Sbjct: 667 DLAKLKAETKHQYHER 682 >gi|283782361|ref|YP_003373116.1| iron-sulfur cluster binding protein [Pirellula staleyi DSM 6068] gi|283440814|gb|ADB19256.1| iron-sulfur cluster binding protein [Pirellula staleyi DSM 6068] Length = 479 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 7/88 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP Y G L D + +L L Sbjct: 316 CIRCGACLNACPIYRSVGGHSYGGVYAGPIGAVLTPLYDGLRENH--HLPQASSL----- 368 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C +CP + + + +++ L Sbjct: 369 CGACQAACPVKIQIPQMLIQLREELKKE 396 >gi|308273808|emb|CBX30409.1| hypothetical protein N47_Q17320 [uncultured Desulfobacterium sp.] Length = 453 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + L C C C CP + L L+++ E ++L Sbjct: 30 AELEKMLTLCTRCGMCQAVCPIFSVTGKESDVARGKLAILDGLLNTMFENPDGVYEHLN- 88 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +C +C +CP G+ + + +L Sbjct: 89 -----KCLLCGSCAANCPSGVKVLDIFIRARAIL 117 >gi|294496342|ref|YP_003542835.1| electron transport complex, RnfABCDGE type, C subunit [Methanohalophilus mahii DSM 5219] gi|292667341|gb|ADE37190.1| electron transport complex, RnfABCDGE type, C subunit [Methanohalophilus mahii DSM 5219] Length = 451 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 32/111 (28%), Gaps = 20/111 (18%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K ++ +D D +C+ CA C CP I + R Sbjct: 339 TKMTTSIIVQDKDEVLKDISKDCIHCARCVDVCPVD----------LIPNRIAALSNQGR 388 Query: 208 -DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 DE + + C C+ CP ++ + I K + Sbjct: 389 FDECRQ---------MHIENCIECGRCSSVCPSKIHVMQLIQYSKEAIARA 430 >gi|134299231|ref|YP_001112727.1| hypothetical protein Dred_1372 [Desulfotomaculum reducens MI-1] gi|134051931|gb|ABO49902.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfotomaculum reducens MI-1] Length = 423 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 6/89 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y +Q ++ ++ E + C Sbjct: 16 KCMKCGNCQAVCPVYKETLAESGVARGKIQLAAKILKGEAKYTPELYK------KFDLCL 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C+ +CP G+ K I + L + Sbjct: 70 QCQACSANCPCGVKAHKIIMAARAELTRQ 98 >gi|297565706|ref|YP_003684678.1| NADH-quinone oxidoreductase subunit I [Meiothermus silvanus DSM 9946] gi|296850155|gb|ADH63170.1| NADH-quinone oxidoreductase, chain I [Meiothermus silvanus DSM 9946] Length = 199 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 12/104 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + H + +GL +C+ C+ C+ CP+Y Y+ PA Sbjct: 21 KPVTIPYPDAPVPLKPRWHGRHVLTRHPNGLEKCIGCSLCAAICPAYAI----YVEPAEN 76 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A+ GER + + L RC C ++CP G Sbjct: 77 DPAH-------PTSAGERYAKVYEINML-RCIFCGLCEEACPTG 112 >gi|291533240|emb|CBL06353.1| Cysteine-rich domain./Uncharacterised ACR, YkgG family COG1556 [Megamonas hypermegale ART12/1] Length = 575 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 13/94 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 Y+CV C+ C CP + Y+ + L++ D F Sbjct: 165 YQCVRCSSCLNVCPIWSTVGGHVYGYIYSGGIGAILTGLLNGMDNFSQFS---------- 214 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP ++ I +++ +K Sbjct: 215 DLCIGCRRCTTICPGKIDIPGLIEELRRRNFAQK 248 >gi|197285165|ref|YP_002151037.1| electron transport complex protein RnfC [Proteus mirabilis HI4320] gi|194682652|emb|CAR42773.1| electron transport complex protein [Proteus mirabilis HI4320] Length = 839 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L+ S E+ + C+ C C +CPS +L Q W ++ Sbjct: 361 NCLLIPSPEEMDTDNIEEACIRCGQCVDACPS-----------GLLPQQLYWFSKGKEHE 409 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 410 KAQ-------QHNLFDCIECGACAFVCPSNIPLVQ 437 >gi|11498417|ref|NP_069645.1| hypothetical protein AF0811 [Archaeoglobus fulgidus DSM 4304] gi|2649796|gb|AAB90430.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 364 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 26/128 (20%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW-----WNSDRYL 191 I K LL + + CV C C CP + W + Y Sbjct: 253 AYINVNEKVQQQDMHVILLDNGRKNTQFREQLACVRCGRCQLECPVFQLAGNVWGGEVYG 312 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC---HTIMNCTQSCPKGLNPAKAIA 248 GP ++ + D + D C C + CP ++ + I Sbjct: 313 GPMGMIWSA-------------ITDAITD-----YCFLSTLCGKCREVCPMKIDMPRMIR 354 Query: 249 KIKMMLLD 256 +I+ + L Sbjct: 355 EIRKLALK 362 >gi|218780618|ref|YP_002431936.1| hypothetical protein Dalk_2776 [Desulfatibacillum alkenivorans AK-01] gi|218762002|gb|ACL04468.1| Putative uncharacterized Fe-S oxidoreductase similar to HrdD (contains HdrC domain) [Desulfatibacillum alkenivorans AK-01] Length = 439 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 13/117 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 E +K K + + E + L C+ C CS+ CP+ + P LL Sbjct: 1 MAEEVIKLTKKKGSTLKDKVMEILPEGGNLNLCLTCGACSSGCPATGLHDMD---PRKLL 57 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + +D + + + ++ C C CP ++ + + + + Sbjct: 58 RMAALGMD----------EEIINSPWIWCCSMCQRCIYVCPMKIDIPQLVFNARQQV 104 >gi|323701305|ref|ZP_08112980.1| protein of unknown function DUF162 [Desulfotomaculum nigrificans DSM 574] gi|323533907|gb|EGB23771.1| protein of unknown function DUF162 [Desulfotomaculum nigrificans DSM 574] Length = 715 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 9/108 (8%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + D +C+ CA C CP + G Sbjct: 295 MDNGRTAMRDDPMFKQALQCIRCASCLNVCPVFQKVGGHVYGHVYTG--------GIGTI 346 Query: 211 QGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L++ E L C C CP ++ IA+++ +++ Sbjct: 347 LTAFLNSFEKAGELQNLCLRCERCKTYCPGKIDLPALIAELRRRTVEK 394 >gi|325104580|ref|YP_004274234.1| FAD linked oxidase domain protein [Pedobacter saltans DSM 12145] gi|324973428|gb|ADY52412.1| FAD linked oxidase domain protein [Pedobacter saltans DSM 12145] Length = 939 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP-- 221 + +C+ C C CPS L P + R L + + + + + L D Sbjct: 530 EHEVDKCMECGYCEHVCPSRNIT----LTPRRRIVVRRELTILKKKGEKAKYEELLDQYQ 585 Query: 222 -FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C C +CP +N + +++ Sbjct: 586 YDGLDTCAVDGLCASACPVDINTGDLVKRLRRE 618 Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 9/56 (16%) Query: 209 EFQGERLDNLED----PFRLYRCHTIMNCTQSCP-KGLNPAKAIAKIKMMLLDRKI 259 + + NL+D + +C C CP + + + +++ R++ Sbjct: 514 DNTKAHITNLKDLPTVEHEVDKCMECGYCEHVCPSRNITLTPR----RRIVVRREL 565 >gi|237653485|ref|YP_002889799.1| formate dehydrogenase, subunit alpha [Thauera sp. MZ1T] gi|237624732|gb|ACR01422.1| formate dehydrogenase, alpha subunit [Thauera sp. MZ1T] Length = 949 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 42/194 (21%) Query: 69 KIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACV-------------------KDMKD 106 + P L + + C +C + I+G LA + ++ Sbjct: 64 ERIPHLCFKDAPGYRADGNCRACMVEIEGERVLAASCMRAAQPGMVVRSASSARARQARE 123 Query: 107 IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG 166 + + P + D SHF+ + P + Sbjct: 124 GVLELLLEQQPARTHSPD---RSSHFWELVEHMRLPAADRGPAAQQPDRTHPA---IHVN 177 Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C+ C C +C N L + D D L D Sbjct: 178 LDACITCGLCVRACREVQVNEVIGLAHRGARAKIVFDFD----------DALGDS----S 223 Query: 227 CHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 224 CVACGECVQACPTG 237 >gi|225155331|ref|ZP_03723824.1| protein of unknown function DUF162 [Opitutaceae bacterium TAV2] gi|224803938|gb|EEG22168.1| protein of unknown function DUF162 [Opitutaceae bacterium TAV2] Length = 472 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 5/90 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C CP Y S L + + +L L Sbjct: 308 RCIRCAACLNVCPVYRQASGHAYRAVYPGPVGAVLSPLLAGKKFPEMADLPKASSL---- 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP + + +++ K Sbjct: 364 -CGACNEVCPVNIPIPDLLLRLRDRAKQEK 392 >gi|83409913|emb|CAI64334.1| probable heterodisulfide reductase chain C [uncultured archaeon] Length = 187 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 12/125 (9%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + KE D + C C C++ CP + + Sbjct: 4 RWEVNNMSDIIKTSDFDKEFRDEVFKEPDADKITLCFNCTGCTSGCPMAEQEPEYNIRKF 63 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + D L + L+ C T C + CP+G+ + KI+ + Sbjct: 64 LRMANLGM------------KDALLNSPYLWYCTTCYKCQERCPQGVKNVDTLLKIRTIA 111 Query: 255 LDRKI 259 +D I Sbjct: 112 IDNGI 116 >gi|84488954|ref|YP_447186.1| HdrC2 [Methanosphaera stadtmanae DSM 3091] gi|84372273|gb|ABC56543.1| HdrC2 [Methanosphaera stadtmanae DSM 3091] Length = 194 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 14/98 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 GL CV C C++SCP+ Y ++ + + LE Sbjct: 18 KASPDLGLLRCVQCGMCASSCPA--ARHSEYDPRVVIKRVL-----------DDDKTLLE 64 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + ++ C NC CP G + + ++ M +D+ Sbjct: 65 DKY-IWNCFYCYNCHSVCPVGNSVCEVNQILRQMAIDK 101 >gi|170764169|ref|ZP_02633409.2| iron-sulfur cluster-binding protein [Clostridium perfringens E str. JGS1987] gi|170661241|gb|EDT13924.1| iron-sulfur cluster-binding protein [Clostridium perfringens E str. JGS1987] Length = 370 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP D ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFEDS----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|171464090|ref|YP_001798203.1| protein of unknown function DUF224 cysteine-rich region domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193628|gb|ACB44589.1| protein of unknown function DUF224 cysteine-rich region domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 409 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%) Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 D GP + + + + + + RL L RC T NC +CP G+ Sbjct: 23 QLLGDELDGPHGRIYLIKQIAEGQAPTEKTRL-------HLDRCLTCRNCESACPSGVQY 75 Query: 244 AKAIAKIKMMLLDR 257 I I + Sbjct: 76 GNLI-DIGRKWAEE 88 >gi|322421272|ref|YP_004200495.1| hypothetical protein GM18_3793 [Geobacter sp. M18] gi|320127659|gb|ADW15219.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M18] Length = 446 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 29/94 (30%), Gaps = 6/94 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + +CV C C +CP++ + + L+ + Sbjct: 34 QEMKKCVKCGACRANCPAFGTFQREPATARGKVALAQHLVKGDITLDDGTYSAMS----- 88 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C CP + + + + L R+ Sbjct: 89 -KCLLCGSCVDKCPNQVPTDEIVIAAREALAQRR 121 >gi|310780337|ref|YP_003968669.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749660|gb|ADO84321.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 324 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 27/95 (28%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + +C+ C C CP+ + +R E + + Sbjct: 202 FWAEQFKKCIRCNACRDICPACSCVKCIFDN-----NDADLSGKARVESEDAFFHMIRAY 256 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C + CP G+ K+ ++ Sbjct: 257 HVAGRCVDCGECARVCPSGIPL----DKLNRKIIK 287 >gi|15679548|ref|NP_276665.1| formate dehydrogenase, alpha subunit-like protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622673|gb|AAB86026.1| formate dehydrogenase, alpha subunit homolog [Methanothermobacter thermautotrophicus str. Delta H] Length = 865 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 54/188 (28%), Gaps = 34/188 (18%) Query: 72 PTLTLRRSCR-EGICGSCGM-NIDGTNTLACVKDMKDIKGAI-----------AVYPLPH 118 P L R G C C + N DG AC ++D I V L Sbjct: 15 PHLCFREGIEPFGGCRLCLVENTDGRLVTACETPVEDGAEFISESERINNIRRTVVSLLI 74 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE------DRQKIDGLYECVM 172 +D + S + + +L ++ E + I +C++ Sbjct: 75 SEHSRDCLSCPSSGDCSLQEVSSYLNLTEDDLSRLRQDLPESEPDESNPFFIRNHDKCIL 134 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C C + + + AYR D +D C + Sbjct: 135 CGLCVRVCRATGAEAIDF--------AYR----GHDTRISTFMDRAITESS---CVSCGE 179 Query: 233 CTQSCPKG 240 C + CP G Sbjct: 180 CVEVCPVG 187 >gi|288555539|ref|YP_003427474.1| hypothetical protein BpOF4_12655 [Bacillus pseudofirmus OF4] gi|288546699|gb|ADC50582.1| hypothetical protein BpOF4_12655 [Bacillus pseudofirmus OF4] Length = 486 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 9/96 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ CA C CP Y G L L+ +D Sbjct: 307 FQSALNCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVL--------TPLLEGYDDHKE 358 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L Y CT +CP + + + K + + + K Sbjct: 359 LPYASSLCAACTDACPVKIPLHELLVKHRRNIAEEK 394 >gi|150400741|ref|YP_001324507.1| CoB--CoM heterodisulfide reductase [Methanococcus aeolicus Nankai-3] gi|150013444|gb|ABR55895.1| CoB--CoM heterodisulfide reductase [Methanococcus aeolicus Nankai-3] Length = 196 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 14/90 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ CPS + AYR R G L + L++ Sbjct: 32 FKRCYQCGTCTGGCPS------------GRITAYRVRQLIRSAMFG--LGDYVKTEDLWK 77 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C T C + CP+ + + I ++ + Sbjct: 78 CTTCYTCYERCPRDVKITEIIKAMRNVAAQ 107 >gi|13541426|ref|NP_111114.1| Fe-S oxidoreductase [Thermoplasma volcanium GSS1] Length = 378 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 165 DGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +CV C C + CP+ +S +G + +++ + ++ Sbjct: 6 QEAGKCVNCGFCESVCPTLPASSFIASIGARGRVDIAKFVYKNG--------TVIDPSTS 57 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C CP G+N K ++I ++ + Sbjct: 58 FYSCVDCYACVAVCPAGVNAGKV-SEIGRQIVAK 90 >gi|294633783|ref|ZP_06712341.1| iron-sulfur cluster binding protein [Streptomyces sp. e14] gi|292830425|gb|EFF88776.1| iron-sulfur cluster binding protein [Streptomyces sp. e14] Length = 488 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 17/94 (18%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y Y GP + L Sbjct: 323 CIRCSACLNVCPVYERTGGHAYGSVYPGPIGAV----LTPQLVGVGHAASLP-------- 370 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +CP ++ + + ++ + + Sbjct: 371 FASTLCGACYDACPVKIDIPEILVHLRSKAVTAQ 404 >gi|260904474|ref|ZP_05912796.1| D-lactate dehydrogenase (cytochrome) [Brevibacterium linens BL2] Length = 962 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 47/159 (29%), Gaps = 9/159 (5%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH--RSIEPWLKTVSPKPAKELLQS 157 + + P V DL M +S+ +S P L Sbjct: 475 GGTLKAEHGTGRIMAPFVRRQVGDDLYAVMKRVKELIDPQSLLNPGVLLSDDPKAHLRDL 534 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGER 214 + + CV C C CPS D L P + R + + DE Sbjct: 535 KTTPTTEEEVDRCVECGYCEPVCPSR----DLTLTPRERIVLRREIARAEAAGDEELTRT 590 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + D + C C +CP +N + +++ Sbjct: 591 LRSEYDYDGIDTCAVDGMCQTACPVFINTGDLVRRLRQE 629 >gi|46580192|ref|YP_011000.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602421|ref|YP_966821.1| iron-sulfur cluster binding protein [Desulfovibrio vulgaris DP4] gi|46449609|gb|AAS96259.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562650|gb|ABM28394.1| iron-sulfur cluster binding protein [Desulfovibrio vulgaris DP4] gi|311233820|gb|ADP86674.1| iron-sulfur cluster binding protein [Desulfovibrio vulgaris RCH1] Length = 475 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 17/90 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP ++ + + R L Sbjct: 311 QCIRCGTCLNHCPVYVRIGGHAYDSVYPGPIGK------ILTPQIDGLA-RKGVLATASS 363 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C + CP + + +++ Sbjct: 364 L-----CNACEEVCPVRIPIPALLRRLRRE 388 >gi|312132062|ref|YP_003999402.1| fad linked oxidase domain protein [Leadbetterella byssophila DSM 17132] gi|311908608|gb|ADQ19049.1| FAD linked oxidase domain protein [Leadbetterella byssophila DSM 17132] Length = 933 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 1/105 (0%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P L + +C+ C C SCPS + + D Sbjct: 511 NPLKDAHLHNLKRMPSVEQEVDKCIECGFCEPSCPSRQVTASPRRRIVTRRVLENFKADG 570 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R E L + L C C +CP +N + ++ Sbjct: 571 RMEEYK-VLAKQFEYHGLDTCAVDGLCALNCPVNINTGDLVKHLR 614 >gi|255533227|ref|YP_003093599.1| D-lactate dehydrogenase (cytochrome) [Pedobacter heparinus DSM 2366] gi|255346211|gb|ACU05537.1| D-lactate dehydrogenase (cytochrome) [Pedobacter heparinus DSM 2366] Length = 934 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 7/89 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP---FRL 224 C+ C C CPS L P + R L + + D L L Sbjct: 534 DRCIECGYCEHKCPSRNIT----LTPRQRIVVRRELAGLKAKGDKNTFDKLVKEYQYDGL 589 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP +N + +++ Sbjct: 590 DTCAVDGLCATACPVDINTGDLVKRLRRE 618 >gi|212636385|ref|YP_002312910.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212557869|gb|ACJ30323.1| 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase [Shewanella piezotolerans WP3] Length = 960 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP+ N A L + R L S D+ + + C Sbjct: 561 DKCIECGFCEKTCPTSALNMSPRQRIATLREIER-LEQSGDKQAASEMRAAAKYDVVDTC 619 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 CT +CP + + + K++ Sbjct: 620 AACQLCTIACPVDNSMGQLVRKLR 643 >gi|34498483|ref|NP_902698.1| iron-sulphur protein [Chromobacterium violaceum ATCC 12472] gi|34104338|gb|AAQ60697.1| probable iron-sulphur protein [Chromobacterium violaceum ATCC 12472] Length = 485 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 21/92 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L ++ D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLENTSDLPTASSL------ 370 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C + CP + + + +++ Sbjct: 371 --------CGACGEVCPVRIPIPEMLMRLREE 394 >gi|227503802|ref|ZP_03933851.1| FAD/FMN-containing dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227199626|gb|EEI79674.1| FAD/FMN-containing dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 1001 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLG 192 + + + SH+ ++ + CV + C + CPS+ D Sbjct: 525 QGLRMAPGQRHFELTPVHALSHDKGSMVNAINRCVGVSACRSESGSMCPSFQITGDEMHS 584 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + + R E G+ D+ E L C + C CP ++ Sbjct: 585 TRGRARMFSEMF--RGESIGDGFDSKEVEEALDLCLSCKACVSECPVNVD 632 >gi|167950752|ref|ZP_02537826.1| heterodisulfide reductase subunit C [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 203 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 17/84 (20%) Query: 169 ECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C+ SCP +W + + + I R + E L ++ Sbjct: 28 MCMQCGVCAGSCPLGKHWEHPPQEIFMMI-----------RAGKREEVL----TSDSMWM 72 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKI 250 C + NC CP+GL + + Sbjct: 73 CTSCYNCIARCPRGLPITHIMHGL 96 >gi|300723257|ref|YP_003712557.1| putative NADH dehydrogenase subunit/ oxidoreductase [Xenorhabdus nematophila ATCC 19061] gi|297629774|emb|CBJ90382.1| putative NADH dehydrogenase subunit/ oxidoreductase [Xenorhabdus nematophila ATCC 19061] Length = 708 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 28/119 (23%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ + + C+ C C +CP+ Q Y + SR + Sbjct: 358 NCILAPSAQEMEPKEIEEACIRCGLCVEACPAGLLPQ----------QLYWF---SRGQE 404 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA----------KAIAKIKMMLLDRKI 259 + + L+ C C CP + +AI + K+ Sbjct: 405 HEKAKN-----HHLFDCIECGACAYVCPSNIPLVQYYRQEKAEIRAIEAETRRSAEAKL 458 >gi|169830754|ref|YP_001716736.1| putative heterodisulfide reductase subunit C [Candidatus Desulforudis audaxviator MP104C] gi|169637598|gb|ACA59104.1| putative heterodisulfide reductase, C subunit [Candidatus Desulforudis audaxviator MP104C] Length = 211 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R L C C C+ CP + L P +++ + + R+E R Sbjct: 42 ERLSGQRLTNCYQCGKCTAGCPLAFSMD---LMPHQVIRLIQLGL--REEALDNR----- 91 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C T C+ CP+ ++ A + +++M Sbjct: 92 ---AVWLCSTCATCSTRCPRNVDLAGLMDALRIMARREG 127 >gi|148262728|ref|YP_001229434.1| hypothetical protein Gura_0649 [Geobacter uraniireducens Rf4] gi|146396228|gb|ABQ24861.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 421 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C +CP++ + + L+ E + + Sbjct: 8 EKDLKKCVKCGACRANCPAFSAYQREPAVARGKVALAQHLLAKDIELDDQTYLTMS---- 63 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C + CP + + + + L +++ Sbjct: 64 --KCLLCGSCVEKCPNEVPTDEIVIAAREALAEQR 96 >gi|297184013|gb|ADI20133.1| uncharacterized anaerobic dehydrogenase [uncultured alpha proteobacterium EB080_L06A09] Length = 919 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 38/216 (17%) Query: 48 YYVDLDNCGPMVLDGLLYIKNKIDPTL-TLRRSC-----REGICGSCGMNIDGTNTLACV 101 + +D ++ + + + K T+ L S +G C +C + IDG TLA Sbjct: 7 FNLDGNSVEAEPGETIWEVAKKQGTTIPHLCHSGKKGYRSDGNCRACMVEIDGERTLAAS 66 Query: 102 KDMKDIKGAIAVYPLPHM-----SVIKDLVVDMSHFYSQ----------HRSIEPWLKTV 146 + + V H ++ +L+V + +E ++ Sbjct: 67 CI-RTPTKDMVVKTESHRAKTARKMVMELLVTDQPPNDKAHDKSSHLWDMAKLENVSESR 125 Query: 147 SPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P+ E + +D L C+ C C +C N +G A + + Sbjct: 126 FPELEIERIPLLDDSHVAMSVNLDACIQCNLCVRACREVQVND--VIGLAGRGHDAKIVF 183 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D ++DP C C Q+CP G Sbjct: 184 D------------MDDPMGESSCVACGECVQACPTG 207 >gi|152993669|ref|YP_001359390.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Sulfurovum sp. NBC37-1] gi|151425530|dbj|BAF73033.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Sulfurovum sp. NBC37-1] Length = 433 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 6/104 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + E +C+ C C C + N D P + + E Sbjct: 1 MKKPEEIFNFTATSDDCIKCGKCIPVCTIHQINPDETTSPRGFIDLLGAYQRGQLELDKN 60 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D C NC CP L I +++ + D+ Sbjct: 61 AKDI------FESCFLCTNCVDVCPNSLPTDMVIEEVRADIADK 98 >gi|99078168|ref|YP_611426.1| formate dehydrogenase, alpha subunit [Ruegeria sp. TM1040] gi|99035306|gb|ABF62164.1| formate dehydrogenase alpha subunit [Ruegeria sp. TM1040] Length = 924 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 47/177 (26%), Gaps = 34/177 (19%) Query: 82 EGICGSCGMNIDGTNTLACVK------------------DMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + + V P V Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPSEGMVVTTNNARAENARKMVMELLVADQPAQEVAH 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D M + E + L L C+ C C +C Sbjct: 107 DKSSHMWDMAELNGVSESRFPKLEEG--HIPLLDDSHVAMSVNLDACISCGLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 165 QVND--VIGMAGRGHNAYPTFD------------IADPMGESSCVACGECVQACPTG 207 >gi|170749336|ref|YP_001755596.1| hypothetical protein Mrad2831_2929 [Methylobacterium radiotolerans JCM 2831] gi|170655858|gb|ACB24913.1| protein of unknown function DUF162 [Methylobacterium radiotolerans JCM 2831] Length = 523 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 13/155 (8%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K + + L ++ + SHF + E + V + Sbjct: 304 IPKVEHLGVFIRLLSRSALGSPITQYTSHFRAPRAGTEMHMVLVDNG-----RSERLGME 358 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C C +CP Y + G +ID F + L Sbjct: 359 EFWTSLKCIRCGACMNTCPVYRRSGGLSYGATYSGPI-GLIIDP--TFNKRKYSTLP--- 412 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + +CT CP +N + I + +L++ Sbjct: 413 --FSSTMNGSCTNVCPVKINIHEQIFAWRKVLVEE 445 >gi|116751505|ref|YP_848192.1| heterodisulfide reductase subunit C-like protein [Syntrophobacter fumaroxidans MPOB] gi|116700569|gb|ABK19757.1| Heterodisulfide reductase subunit C-like [Syntrophobacter fumaroxidans MPOB] Length = 148 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 50/124 (40%), Gaps = 13/124 (10%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + E +S K K + +Y+C C C +CP + P Sbjct: 8 YEMREIMPIEISEKTVKRDFIEKISKLSGQDVYKCYQCGTCGGACP---MSDHMDAVPRK 64 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +++ ++ ++ + + + C + +C+ +CP+G++ A+ + I+++ L Sbjct: 65 IMRMAQFGME----------EAVTGSKTFWTCASCHSCSVNCPRGIDLARVMEAIRLLTL 114 Query: 256 DRKI 259 + + Sbjct: 115 RKNL 118 >gi|300934375|ref|ZP_07149631.1| iron-sulfur cluster binding protein [Corynebacterium resistens DSM 45100] Length = 498 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 11/98 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y G P + L+ D + L Sbjct: 324 HGREALHCIRCSACMNVCPVYERTGGHAYGSVYPGPIGAILTPLLTGVDASENGSLP--- 380 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C ++CP +N + + +++ +++ Sbjct: 381 -----YASSLCGACYEACPVKINIPEMLVRLRAQDVEK 413 >gi|83590469|ref|YP_430478.1| hypothetical protein Moth_1633 [Moorella thermoacetica ATCC 39073] gi|83573383|gb|ABC19935.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 459 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 18/111 (16%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGP-------------AILLQAYRWLID--S 206 L C+ C C+ CP Y + + + A R+ Sbjct: 45 PYTLSLDTCMKCGTCAEVCPVYLASGRKDIYHPVYRSDMLRKVYKRYFTLAGRFFPGLVG 104 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ ++L+ + +YRC C CP ++ IA+ + D Sbjct: 105 AEDLTEDKLNAM--AENIYRCTICRRCAYVCPVAID-NGLIAREARKIFDA 152 >gi|325284771|ref|YP_004264234.1| Lactate utilization protein B/C [Deinococcus proteolyticus MRP] gi|324316260|gb|ADY27374.1| Lactate utilization protein B/C [Deinococcus proteolyticus MRP] Length = 518 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 5/85 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C CP Y G L + ++L L Sbjct: 311 RCIRCSACLNVCPVYERAGGHAYGSVYPGPIGSILTPQLLGMHDKNANSLPFASSL---- 366 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 C + CP +N + + ++ Sbjct: 367 -CGACYEVCPVEINIPQVLIYLRNE 390 >gi|292656789|ref|YP_003536686.1| FAD-linked oxidase domain-containing protein [Haloferax volcanii DS2] gi|291372821|gb|ADE05048.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] Length = 1060 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 43/147 (29%), Gaps = 11/147 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQ-----HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 P V +D D+ + R + L ++ + C Sbjct: 577 PGNVVYRDGSDDLGPDGDRGVGADMRENLRYGAAYRSIEPATTLDFSDEGGFSHLVELCN 636 Query: 172 MCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C T CP+Y + D R I S D E + L Sbjct: 637 GCGTCRQTGSETMCPTYRASKDEAETTRGRANMLRAAI-SGDLSDDEIHSDRFQEEVLDL 695 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP G++ AK A++K Sbjct: 696 CVGCKGCQNDCPTGVDLAKLKAEVKHA 722 >gi|167624999|ref|YP_001675293.1| hypothetical protein Shal_3086 [Shewanella halifaxensis HAW-EB4] gi|167355021|gb|ABZ77634.1| protein of unknown function DUF162 [Shewanella halifaxensis HAW-EB4] Length = 457 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 16/93 (17%) Query: 169 ECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C +CP Y + Y P + A D + + Sbjct: 306 KCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGSQCDDTNSMP-------------W 352 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C+ CP + K I + + + Sbjct: 353 ACTLCGSCSYVCPTKVPLDKIIHHHRRLKAEAG 385 >gi|118579957|ref|YP_901207.1| hypothetical protein Ppro_1534 [Pelobacter propionicus DSM 2379] gi|118502667|gb|ABK99149.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pelobacter propionicus DSM 2379] Length = 446 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 12/107 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 RQ L C C C+ +C SY D + PA R + + G+ L + Sbjct: 41 ARQLSVMLESCTGCGACAQACHSYRGTDDHHNIPAARAGLMRRVYKRHFTWLGKALGIVG 100 Query: 220 DP------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C C CP G++ + + + +L Sbjct: 101 GAPQLDAQTLESWIDYFYQCTVCRRCATFCPLGIDTGEIVLAGRNIL 147 >gi|325264019|ref|ZP_08130752.1| Na(+)-translocating NADH-quinone reductase, A subunit [Clostridium sp. D5] gi|324031057|gb|EGB92339.1| Na(+)-translocating NADH-quinone reductase, A subunit [Clostridium sp. D5] Length = 439 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 L T K + +L ED C+ C C CPS + Sbjct: 331 MMGFAMMTLDTPVTKTSSSILAFTEDIVAKSQTTACINCGRCVEVCPSRI------IPSR 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + A R+ DE + LE C +C+ CP ++I ++ + Sbjct: 385 LADCAERF-----DEETFTAQNGLE-------CVECGSCSYVCPAKRPLKQSIGSMRKIA 432 Query: 255 LDRK 258 L + Sbjct: 433 LANR 436 >gi|258510715|ref|YP_003184149.1| iron-sulfur cluster binding protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477441|gb|ACV57760.1| iron-sulfur cluster binding protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 472 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y Y GP + + GE +L Sbjct: 309 HCIRCGACLNVCPVYRQIGGHAYGSVYPGPIGAVLSPLL-------EGGEAYQDLPYASS 361 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C ++CP + + K + + + Sbjct: 362 L-----CGACYEACPVKIPLHDMLVKERQRFVAK 390 >gi|227355595|ref|ZP_03839990.1| electron transport complex protein [Proteus mirabilis ATCC 29906] gi|227164391|gb|EEI49280.1| electron transport complex protein [Proteus mirabilis ATCC 29906] Length = 673 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L+ S E+ + C+ C C +CPS +L Q W ++ Sbjct: 361 NCLLIPSPEEMDTDNVEEACIRCGQCVDACPS-----------GLLPQQLYWFSKGKEHE 409 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 410 KAQ-------QHNLFDCIECGACAFVCPSNIPLVQ 437 >gi|226941760|ref|YP_002796834.1| iron-sulphur protein [Laribacter hongkongensis HLHK9] gi|226716687|gb|ACO75825.1| Probable iron-sulphur protein [Laribacter hongkongensis HLHK9] Length = 482 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L Sbjct: 318 QCIRCGACMNHCPVYTRIGGHAYGMVYPGPIGEIVS----PHLLGLAATASLPTASS--- 370 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C++ CP + + +++ Sbjct: 371 -----LCGACSEVCPVRIPIPDLLVRLRTEA 396 >gi|218289344|ref|ZP_03493578.1| iron-sulfur cluster binding protein [Alicyclobacillus acidocaldarius LAA1] gi|218240450|gb|EED07631.1| iron-sulfur cluster binding protein [Alicyclobacillus acidocaldarius LAA1] Length = 472 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y Y GP + + GE +L Sbjct: 309 HCIRCGACLNVCPVYRQIGGHAYGSVYPGPIGAVLSPLL-------EGGEAYQDLPYASS 361 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C ++CP + + K + + + Sbjct: 362 L-----CGACYEACPVKIPLHDMLVKERQRFVAK 390 >gi|294632640|ref|ZP_06711200.1| oxidoreductase, FAD-binding [Streptomyces sp. e14] gi|292835973|gb|EFF94322.1| oxidoreductase, FAD-binding [Streptomyces sp. e14] Length = 1031 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 38/132 (28%), Gaps = 9/132 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + D VVD + Q R W +D + CV C Sbjct: 516 PDDRMNPDKVVDPNPLDGQLRLGADWRP---TPLETRFGYPQDDHSFTRAVMRCVGIGNC 572 Query: 177 STS-----CPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTI 230 + CPSY + + ++D D + + E L C Sbjct: 573 RSHEGGVMCPSYRATKEEEHSTRGRARLLFEMLDGHADSTITDGWRSTEVKDALDLCLAC 632 Query: 231 MNCTQSCPKGLN 242 C CP G++ Sbjct: 633 KGCKSDCPVGVD 644 >gi|138894041|ref|YP_001124494.1| Iron-sulfur cluster-binding protein [Geobacillus thermodenitrificans NG80-2] gi|196250290|ref|ZP_03148983.1| iron-sulfur cluster binding protein [Geobacillus sp. G11MC16] gi|259495065|sp|A4IK95|LUTB_GEOTN RecName: Full=Lactate utilization protein B gi|134265554|gb|ABO65749.1| Iron-sulfur cluster-binding protein [Geobacillus thermodenitrificans NG80-2] gi|196210179|gb|EDY04945.1| iron-sulfur cluster binding protein [Geobacillus sp. G11MC16] Length = 476 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT+ CP + + + K + ++++R Sbjct: 364 SLCAACTEVCPVKIPLHELLIKHRQIIVER 393 >gi|85059431|ref|YP_455133.1| putative iron-sulfur binding NADH dehydrogenase [Sodalis glossinidius str. 'morsitans'] gi|84779951|dbj|BAE74728.1| putative iron-sulfur binding NADH dehydrogenase [Sodalis glossinidius str. 'morsitans'] Length = 663 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + L+ C Sbjct: 377 CIRCSRCADACPASLLPQQLYWFSRG---------QEHDKARQ---------HHLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + Sbjct: 419 CGACAYVCPSNIPLVH 434 >gi|325968063|ref|YP_004244255.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] gi|323707266|gb|ADY00753.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 104 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + + +C C C CP++ R GP + + LI++ + + Sbjct: 8 YEEVRKCQFCGFCEFPCPTFNTLRSRAYGPRGRINLIKTLIENGFGQGKDVGLGGDVINP 67 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C C CP G+ A AI K ++L+ Sbjct: 68 IMTCLHCAACDTQCPAGIRIADAIHSFKAIILE 100 >gi|228990406|ref|ZP_04150371.1| Uncharacterized electron transport protein ykgF [Bacillus pseudomycoides DSM 12442] gi|228768932|gb|EEM17530.1| Uncharacterized electron transport protein ykgF [Bacillus pseudomycoides DSM 12442] Length = 473 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEK 391 >gi|157737509|ref|YP_001490192.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Arcobacter butzleri RM4018] gi|157699363|gb|ABV67523.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Arcobacter butzleri RM4018] Length = 432 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +CV C C C + N D P + D ++ + L+ + Sbjct: 5 KFDYTKISDDCVKCGKCKPVCTIFNINQDEATSPRGFI-------DLLGAYKRDELELDK 57 Query: 220 DPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ++ C NC + CP L I +++ + + Sbjct: 58 NAKDIFESCFLCTNCVEVCPNDLPTDMIIEQVRSDIAKK 96 >gi|15614396|ref|NP_242699.1| hypothetical protein BH1833 [Bacillus halodurans C-125] gi|81786963|sp|Q9KBU1|LUTB_BACHD RecName: Full=Lactate utilization protein B gi|10174451|dbj|BAB05552.1| BH1833 [Bacillus halodurans C-125] Length = 485 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 9/95 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ CA C CP Y G L L+ +D Sbjct: 307 FQAALHCIRCAACINVCPIYRHVGGHSYGSIYPGPIGAVL--------TPLLEGYDDHEE 358 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L Y CT +CP + + + K + ++ ++ Sbjct: 359 LPYASSLCAACTDACPVKIPLHELLIKHRRVIAEQ 393 >gi|152979625|ref|YP_001345254.1| iron-sulfur cluster binding protein [Actinobacillus succinogenes 130Z] gi|150841348|gb|ABR75319.1| iron-sulfur cluster binding protein [Actinobacillus succinogenes 130Z] Length = 470 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + + + Y C Sbjct: 311 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGAVIS-PLLGGYKDFKELP------YACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + A+ I + + + Sbjct: 364 LCSGCNSVCPVKIPLAQLILRHRENIAQ 391 >gi|304397718|ref|ZP_07379595.1| electron transport complex, RnfABCDGE type, C subunit [Pantoea sp. aB] gi|304354890|gb|EFM19260.1| electron transport complex, RnfABCDGE type, C subunit [Pantoea sp. aB] Length = 947 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y W D + + C Sbjct: 377 CIRCSACADACPAKLLPQQLY-----------WFSQGGDHDKAR-------SHHIDDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|227831110|ref|YP_002832890.1| hypothetical protein LS215_2260 [Sulfolobus islandicus L.S.2.15] gi|229579995|ref|YP_002838395.1| hypothetical protein YG5714_2224 [Sulfolobus islandicus Y.G.57.14] gi|284998609|ref|YP_003420377.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457558|gb|ACP36245.1| conserved hypothetical protein [Sulfolobus islandicus L.S.2.15] gi|228010711|gb|ACP46473.1| conserved hypothetical protein [Sulfolobus islandicus Y.G.57.14] gi|284446505|gb|ADB88007.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 619 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDVFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|229581344|ref|YP_002839743.1| hypothetical protein YN1551_0692 [Sulfolobus islandicus Y.N.15.51] gi|228012060|gb|ACP47821.1| conserved hypothetical protein [Sulfolobus islandicus Y.N.15.51] Length = 619 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDVFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|315637290|ref|ZP_07892509.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] gi|315478454|gb|EFU69168.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] Length = 432 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +CV C C C + N D P + D ++ + L+ + Sbjct: 5 KFDYTKISDDCVKCGKCKPVCTIFNINQDEATSPRGFI-------DLLGAYKRDELELDK 57 Query: 220 DPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + ++ C NC + CP L I +++ + + Sbjct: 58 NAKDIFESCFLCTNCVEVCPNDLPTDMIIEQVRSDIAKK 96 >gi|295703361|ref|YP_003596436.1| iron-sulfur cluster binding protein [Bacillus megaterium DSM 319] gi|294801020|gb|ADF38086.1| iron-sulfur cluster binding protein [Bacillus megaterium DSM 319] Length = 479 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L ED L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYEDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT +CP + + + K + ++++ Sbjct: 364 TLCAACTDACPVKIPLHELLHKHRQRIVEK 393 >gi|294498008|ref|YP_003561708.1| iron-sulfur cluster binding protein [Bacillus megaterium QM B1551] gi|294347945|gb|ADE68274.1| iron-sulfur cluster binding protein [Bacillus megaterium QM B1551] Length = 479 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L ED L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYEDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT +CP + + + K + ++++ Sbjct: 364 TLCAACTDACPVKIPLHELLHKHRQRIVEK 393 >gi|254457692|ref|ZP_05071120.1| iron-sulfur cluster-binding domain protein [Campylobacterales bacterium GD 1] gi|207086484|gb|EDZ63768.1| iron-sulfur cluster-binding domain protein [Campylobacterales bacterium GD 1] Length = 427 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 6/105 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E + +CV C C C + N+D P L + + Sbjct: 1 MSKTPQEIFDYANITDDCVKCGKCIPVCTIHNVNADEVTSPRGFLDLLGAYQRGKLDLDK 60 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D C NC CPK L I +++ + + Sbjct: 61 NVKDI------FESCFLCTNCVDVCPKSLPTDMVIEQVRSDISKK 99 >gi|90419947|ref|ZP_01227856.1| iron-sulfur cluster-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90335988|gb|EAS49736.1| iron-sulfur cluster-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 478 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 45/179 (25%), Gaps = 13/179 (7%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + G C + + L + + L + +D+ V + R + Sbjct: 230 TQLLGKCHVVLASIEKLVPTLEDTAQI----LRILARSATGQDMSVYTTLSTGPKREADL 285 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + +S+ + + + C+ C C CP Y G Sbjct: 286 DGPEEYHVILLDNGRSNMLGTEFEEMLRCIRCGACMNHCPVYHAVGGHSYGWVYPGPMGA 345 Query: 202 WLIDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L S L N C CP + K + + + + Sbjct: 346 VLTPSLIGVDKSGHLPNAS--------TFCGRCESVCPMRIPLPKMMRHWREKEFESHL 396 >gi|260495253|ref|ZP_05815381.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_33] gi|260197310|gb|EEW94829.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 3_1_33] Length = 719 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAEIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C GL+ + I K++ + Sbjct: 365 -----CLQCGRCNDVCGGGLHISDMIMKLREKNMKE 395 >gi|261377470|ref|ZP_05982043.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria cinerea ATCC 14685] gi|269146199|gb|EEZ72617.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria cinerea ATCC 14685] Length = 1277 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|224373307|ref|YP_002607679.1| ferredoxin-type oxidoreductase [Nautilia profundicola AmH] gi|223589931|gb|ACM93667.1| ferredoxin-type oxidoreductase [Nautilia profundicola AmH] Length = 424 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + D C+ C C C + N D P L + + + E D Sbjct: 2 FKFSDTSDMCIKCGKCIPGCTIHRINPDETTSPRGFLDLLKGVEEGEIELDKNAKDI--- 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP L I ++ + D+ Sbjct: 59 ---FESCFLCNQCVEVCPNSLPTDFMIENVRKEIADK 92 >gi|170289785|ref|YP_001736601.1| membrane associated Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170173865|gb|ACB06918.1| Membrane associated Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 623 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 20/100 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + L CV C C+ SCPS + +G + + + Sbjct: 262 WYEKYRLSACVKCGRCTDSCPSNIIGRPLSPKEVVIGLRASILGAEYEL----------- 310 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C C SCP ++P + + + L+ Sbjct: 311 ----GDDTVWSCVACGACASSCPNYVSPFSFLMERRRKLV 346 >gi|332704002|ref|ZP_08424090.1| heterodisulfide reductase, C subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554151|gb|EGJ51195.1| heterodisulfide reductase, C subunit [Desulfovibrio africanus str. Walvis Bay] Length = 186 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 13/110 (11%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + +R+ L C C C+ CP ++ + + R L + Sbjct: 8 HSKNTDFMAQVERESGQNLSLCYQCGNCTAGCP------YTFVYDIPVSKIMRLLQTGQ- 60 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + ++ C T +CT CP ++ A+ + ++ M Sbjct: 61 ------KDAVLSCHSIWLCATCESCTTRCPNDIDVARIMDVLRHMARREG 104 >gi|209966145|ref|YP_002299060.1| iron-sulfur cluster binding protein [Rhodospirillum centenum SW] gi|209959611|gb|ACJ00248.1| iron-sulfur cluster binding protein [Rhodospirillum centenum SW] Length = 473 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 7/91 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y G ++D E Sbjct: 313 RCIRCGACMNHCPVYAAVGGHAYGWVYPGPIGA-VLDPALLGLEEAGHLPNAS------T 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + + +RK+ Sbjct: 366 FCGRCESVCPVRIPLPRLMRLWREKEWERKL 396 >gi|167770687|ref|ZP_02442740.1| hypothetical protein ANACOL_02033 [Anaerotruncus colihominis DSM 17241] gi|167667282|gb|EDS11412.1| hypothetical protein ANACOL_02033 [Anaerotruncus colihominis DSM 17241] Length = 102 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 8/98 (8%) Query: 32 IYRWNPDNKGNPCMDTYYVDLDNCGP-MVLDGLLYIKNKIDPTLTL--RRSCREGICGSC 88 I R++ + Y V +D V++ L YI +D TL +C++ CG C Sbjct: 8 IRRYSAEKGA--YSQEYTVPVDEHEVLSVMNVLEYIYTHLDDTLAFFSHAACKQAACGKC 65 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 + I+G LAC + + + P +VI+DL+ Sbjct: 66 LIKINGKPRLAC--KERADTDELLLEP-AGKTVIRDLI 100 >gi|11498154|ref|NP_069380.1| hypothetical protein AF0544 [Archaeoglobus fulgidus DSM 4304] gi|2650080|gb|AAB90694.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 521 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 8/95 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR--YLGPAILLQAYRWLIDSRDEFQGERL---DNL 218 + L C C CS +CP Y + + Y + + +++ + RL L Sbjct: 101 MLSLEYCARCQTCSEACPIYVSSGRKEIYSPLFRSEMFRKIIRETKGGKRRGRLTVKAIL 160 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAKI 250 YRC CT +CP G++ + I K+ Sbjct: 161 RLAELAYRCTLCRRCTLACPLGIDNGLITREIRKL 195 >gi|89894459|ref|YP_517946.1| hypothetical protein DSY1713 [Desulfitobacterium hafniense Y51] gi|219668884|ref|YP_002459319.1| hypothetical protein Dhaf_2860 [Desulfitobacterium hafniense DCB-2] gi|89333907|dbj|BAE83502.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539144|gb|ACL20883.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 699 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 45/182 (24%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLYECVM 172 P+ + L+ + F H I + E + + + C+ Sbjct: 223 PYSKLSHILLAPANQFLRHHGPIGIPENIDFEDESLETYGKSKLGEFSWKTLFNTDACLR 282 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------------------- 205 C C +CP+Y S ++L P ++Q ++ Sbjct: 283 CGRCQDNCPAY--LSGKHLNPKKVIQDMGAYLEEMGQALKTYRAANPALAVAGSGNEVAA 340 Query: 206 ----------SRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +E G R + ++ L+ C T +C + CP + ++ Sbjct: 341 AAEADTGAQVPSEEELGLRSLIGDVIAEDDLWDCTTCRSCEEQCPIFVEHVDKTIDMRRN 400 Query: 254 LL 255 L+ Sbjct: 401 LV 402 >gi|323486693|ref|ZP_08092014.1| hypothetical protein HMPREF9474_03765 [Clostridium symbiosum WAL-14163] gi|323692168|ref|ZP_08106411.1| electron transport complex [Clostridium symbiosum WAL-14673] gi|323400074|gb|EGA92451.1| hypothetical protein HMPREF9474_03765 [Clostridium symbiosum WAL-14163] gi|323503742|gb|EGB19561.1| electron transport complex [Clostridium symbiosum WAL-14673] Length = 441 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 18/103 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +D+ C+ C C CP + ++D+ + E+ Sbjct: 355 TFTKDQVAAMEPTPCIRCGKCVDVCPEHLVPQ--------------MMMDAAERHDMEKF 400 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C C +CP +A +++ + + Sbjct: 401 QKLDGME----CVECGCCAYTCPAKRPLTQAFKELRKAVAASR 439 >gi|298369248|ref|ZP_06980566.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283251|gb|EFI24738.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria sp. oral taxon 014 str. F0314] Length = 1277 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|241758898|ref|ZP_04757011.1| putative oxidoreductase, FAD-binding [Neisseria flavescens SK114] gi|241321106|gb|EER57319.1| putative oxidoreductase, FAD-binding [Neisseria flavescens SK114] Length = 1277 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|238792133|ref|ZP_04635768.1| Electron transport complex protein rnfC [Yersinia intermedia ATCC 29909] gi|238728370|gb|EEQ19889.1| Electron transport complex protein rnfC [Yersinia intermedia ATCC 29909] Length = 545 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 344 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 385 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 386 CGACAYVCPSNIPLVQ 401 >gi|238796521|ref|ZP_04640029.1| Electron transport complex protein rnfC [Yersinia mollaretii ATCC 43969] gi|238719726|gb|EEQ11534.1| Electron transport complex protein rnfC [Yersinia mollaretii ATCC 43969] Length = 622 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 344 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 385 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 386 CGACAYVCPSNIPLVQ 401 >gi|238785614|ref|ZP_04629593.1| Electron transport complex protein rnfC [Yersinia bercovieri ATCC 43970] gi|238713501|gb|EEQ05534.1| Electron transport complex protein rnfC [Yersinia bercovieri ATCC 43970] Length = 556 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 353 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 394 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 395 CGACAYVCPSNIPLVQ 410 >gi|238752179|ref|ZP_04613660.1| Electron transport complex protein rnfC [Yersinia rohdei ATCC 43380] gi|238709550|gb|EEQ01787.1| Electron transport complex protein rnfC [Yersinia rohdei ATCC 43380] Length = 541 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 344 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 385 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 386 CGACAYVCPSNIPLVQ 401 >gi|238762650|ref|ZP_04623620.1| Electron transport complex protein rnfC [Yersinia kristensenii ATCC 33638] gi|238699295|gb|EEP92042.1| Electron transport complex protein rnfC [Yersinia kristensenii ATCC 33638] Length = 537 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 344 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 385 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 386 CGACAYVCPSNIPLVQ 401 >gi|229057032|ref|ZP_04196426.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH603] gi|228720309|gb|EEL71885.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH603] Length = 473 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + E L Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVLTPLL-------GGYEDYKELPYASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L CT++CP + + K + +++++ Sbjct: 363 L-----CGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|218887286|ref|YP_002436607.1| FAD linked oxidase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758240|gb|ACL09139.1| FAD linked oxidase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 942 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 12/118 (10%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +P + + +C+ C C CPS D P + +R + S Sbjct: 519 NPDAEAHIRNLKPLPAAHTVIDKCIECGFCEPICPSR----DVTFTPRQRIVGWREI--S 572 Query: 207 RDEFQGERLDNLEDPFRLYR------CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 R + E+ L+ F Y C T C CP G+N I +++ + + Sbjct: 573 RMKAGDEKSGLLKQLFSGYDYLGDNTCATDGLCATRCPVGINTGAFIKELRADKVGAR 630 >gi|170024243|ref|YP_001720748.1| electron transport complex protein RnfC [Yersinia pseudotuberculosis YPIII] gi|226735459|sp|B1JKN4|RNFC_YERPY RecName: Full=Electron transport complex protein rnfC gi|169750777|gb|ACA68295.1| electron transport complex, RnfABCDGE type, C subunit [Yersinia pseudotuberculosis YPIII] Length = 698 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|123442264|ref|YP_001006245.1| electron transport complex protein RnfC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225386|sp|A1JM81|RNFC_YERE8 RecName: Full=Electron transport complex protein rnfC gi|122089225|emb|CAL12071.1| putative iron-sulfur binding NADH dehydrogenase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 697 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|22125975|ref|NP_669398.1| electron transport complex protein RnfC [Yersinia pestis KIM 10] gi|108811874|ref|YP_647641.1| electron transport complex protein RnfC [Yersinia pestis Nepal516] gi|166210950|ref|ZP_02236985.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. B42003004] gi|167424927|ref|ZP_02316680.1| electron transport complex protein RnfC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229894929|ref|ZP_04510107.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|229902176|ref|ZP_04517297.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|270490649|ref|ZP_06207723.1| electron transport complex, RnfABCDGE type, C subunit [Yersinia pestis KIM D27] gi|123073407|sp|Q1CIY9|RNFC_YERPN RecName: Full=Electron transport complex protein rnfC gi|21958919|gb|AAM85649.1|AE013811_2 putative membrane protein [Yersinia pestis KIM 10] gi|108775522|gb|ABG18041.1| iron-sulfur binding NADH dehydrogenase [Yersinia pestis Nepal516] gi|166208130|gb|EDR52610.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. B42003004] gi|167056114|gb|EDR65892.1| electron transport complex protein RnfC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681072|gb|EEO77167.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|229702024|gb|EEO90045.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|270339153|gb|EFA49930.1| electron transport complex, RnfABCDGE type, C subunit [Yersinia pestis KIM D27] gi|320014908|gb|ADV98479.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 659 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|45441842|ref|NP_993381.1| electron transport complex protein RnfC [Yersinia pestis biovar Microtus str. 91001] gi|45436704|gb|AAS62258.1| putative iron-sulfur binding NADH dehydrogenase [Yersinia pestis biovar Microtus str. 91001] Length = 659 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|51596491|ref|YP_070682.1| electron transport complex protein RnfC [Yersinia pseudotuberculosis IP 32953] gi|186895541|ref|YP_001872653.1| electron transport complex protein RnfC [Yersinia pseudotuberculosis PB1/+] gi|226735457|sp|B2K4K0|RNFC_YERPB RecName: Full=Electron transport complex protein rnfC gi|51589773|emb|CAH21403.1| putative iron-sulfur binding NADH dehydrogenase [Yersinia pseudotuberculosis IP 32953] gi|186698567|gb|ACC89196.1| electron transport complex, RnfABCDGE type, C subunit [Yersinia pseudotuberculosis PB1/+] Length = 659 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|113971070|ref|YP_734863.1| FAD linked oxidase domain-containing protein [Shewanella sp. MR-4] gi|113885754|gb|ABI39806.1| FAD linked oxidase domain protein [Shewanella sp. MR-4] Length = 934 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ +++ Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAADKMRADAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 IDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|114048300|ref|YP_738850.1| FAD linked oxidase domain-containing protein [Shewanella sp. MR-7] gi|113889742|gb|ABI43793.1| FAD linked oxidase domain protein [Shewanella sp. MR-7] Length = 934 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ +++ Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAADKMRADAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 IDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|162421102|ref|YP_001606696.1| electron transport complex protein RnfC [Yersinia pestis Angola] gi|226735458|sp|A9R8U6|RNFC_YERPG RecName: Full=Electron transport complex protein rnfC gi|162353917|gb|ABX87865.1| electron transport complex protein RnfC [Yersinia pestis Angola] Length = 659 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|153947990|ref|YP_001400871.1| electron transport complex protein RnfC [Yersinia pseudotuberculosis IP 31758] gi|166991049|sp|A7FHZ3|RNFC_YERP3 RecName: Full=Electron transport complex protein rnfC gi|152959485|gb|ABS46946.1| electron transport complex, RnfABCDGE type, C subunit [Yersinia pseudotuberculosis IP 31758] Length = 698 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|108807598|ref|YP_651514.1| electron transport complex protein RnfC [Yersinia pestis Antiqua] gi|149365837|ref|ZP_01887872.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|165927361|ref|ZP_02223193.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. F1991016] gi|165938230|ref|ZP_02226789.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. IP275] gi|166010764|ref|ZP_02231662.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. E1979001] gi|167400753|ref|ZP_02306259.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420227|ref|ZP_02311980.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167470481|ref|ZP_02335185.1| electron transport complex protein RnfC [Yersinia pestis FV-1] gi|218929340|ref|YP_002347215.1| electron transport complex protein RnfC [Yersinia pestis CO92] gi|229897672|ref|ZP_04512828.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898317|ref|ZP_04513464.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|294503723|ref|YP_003567785.1| cell envelope integrity inner membrane protein TolA [Yersinia pestis Z176003] gi|122979618|sp|Q1C7K3|RNFC_YERPA RecName: Full=Electron transport complex protein rnfC gi|108779511|gb|ABG13569.1| putative iron-sulfur binding NADH dehydrogenase [Yersinia pestis Antiqua] gi|115347951|emb|CAL20873.1| putative iron-sulfur binding NADH dehydrogenase [Yersinia pestis CO92] gi|149292250|gb|EDM42324.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|165913891|gb|EDR32509.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. IP275] gi|165920627|gb|EDR37875.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. F1991016] gi|165990466|gb|EDR42767.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. E1979001] gi|166961922|gb|EDR57943.1| electron transport complex protein RnfC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049606|gb|EDR61014.1| electron transport complex protein RnfC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|229688607|gb|EEO80676.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|229694009|gb|EEO84058.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|262362157|gb|ACY58878.1| electron transport complex protein RnfC [Yersinia pestis D106004] gi|262365490|gb|ACY62047.1| electron transport complex protein RnfC [Yersinia pestis D182038] gi|294354182|gb|ADE64523.1| cell envelope integrity inner membrane protein TolA [Yersinia pestis Z176003] Length = 620 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|261365814|ref|ZP_05978697.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria mucosa ATCC 25996] gi|288565620|gb|EFC87180.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria mucosa ATCC 25996] Length = 1277 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|83644127|ref|YP_432562.1| iron-sulfur cluster binding protein [Hahella chejuensis KCTC 2396] gi|83632170|gb|ABC28137.1| iron-sulfur cluster binding protein [Hahella chejuensis KCTC 2396] Length = 489 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 19/89 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAI-LLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C CP Y Y GP ++ W + + Sbjct: 316 RCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGQVVSPQIWGLHTAGSITK---------- 365 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C ++CP + A I +++ Sbjct: 366 ---ACSLNGACGEACPVKIPLADLIRRLR 391 >gi|116749576|ref|YP_846263.1| hypothetical protein Sfum_2146 [Syntrophobacter fumaroxidans MPOB] gi|116698640|gb|ABK17828.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 441 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 29/107 (27%), Gaps = 10/107 (9%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + ++ L C+ C C+ CP +L+ + + Sbjct: 1 MQEAITNPKFKDPVKEYLGKFNLNLCLTCGTCTNGCPITGMPGMEGWDTRKVLRMLAYGM 60 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + + C C CP G++ + +K Sbjct: 61 ----------TDEVVQSKFPWLCTGCGRCVHGCPMGIDIVGIMGHMK 97 >gi|145598188|ref|YP_001162264.1| electron transport complex protein RnfC [Yersinia pestis Pestoides F] gi|145209884|gb|ABP39291.1| iron-sulfur binding NADH dehydrogenase [Yersinia pestis Pestoides F] Length = 581 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + L+ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|197116960|ref|YP_002137387.1| D-lactate/glycolate dehydrogenase iron-sulfur cluster-binding protein [Geobacter bemidjiensis Bem] gi|197086320|gb|ACH37591.1| D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative [Geobacter bemidjiensis Bem] Length = 426 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + +CV C C CP++ + + L + Sbjct: 15 EMKKCVKCGACRAHCPAFSTFQREPATARGKVALAQHLCKGDITLDDGTYSAMS------ 68 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C + CP + + + + L R+ Sbjct: 69 KCLLCGSCVEKCPNQVPTDEIVIAAREALAQRR 101 >gi|15602250|ref|NP_245322.1| electron transport complex protein RnfC [Pasteurella multocida subsp. multocida str. Pm70] gi|17368785|sp|Q9CNP2|RNFC_PASMU RecName: Full=Electron transport complex protein rnfC gi|12720632|gb|AAK02469.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 835 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 377 CIRCSACSDACPVSLMPQQLY-----------WFARSEDHEKSE-------EYALKDCIE 418 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 419 CGLCAYVCPSHIPL---IQYFRQE--KAKI 443 >gi|327479948|gb|AEA83258.1| electron transport complex, RnfABCDGE type, C subunit [Pseudomonas stutzeri DSM 4166] Length = 487 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 18/80 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ CA C +CP +G A L A R +D D + L Sbjct: 365 DSAPCIRCARCVDACP---------MGLAPLEMAARTRVDDFDGA---------SEYGLR 406 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 407 DCILCGCCAYVCPSHIPLVQ 426 >gi|255067602|ref|ZP_05319457.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria sicca ATCC 29256] gi|255048223|gb|EET43687.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria sicca ATCC 29256] Length = 1277 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|237743843|ref|ZP_04574324.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 7_1] gi|229432874|gb|EEO43086.1| iron-sulfur cluster-binding protein [Fusobacterium sp. 7_1] Length = 719 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 308 FREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAEIQNI-- 364 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C GL+ + I K++ + Sbjct: 365 ---CLQCGRCNDVCGGGLHISDMIMKLREKNMKE 395 >gi|146281701|ref|YP_001171854.1| electron transport complex, RnfABCDGE type, C subunit [Pseudomonas stutzeri A1501] gi|25136601|emb|CAC03726.2| rnfC protein [Pseudomonas stutzeri] gi|145569906|gb|ABP79012.1| electron transport complex, RnfABCDGE type, C subunit [Pseudomonas stutzeri A1501] Length = 487 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 18/80 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ CA C +CP +G A L A R +D D + L Sbjct: 365 DSAPCIRCARCVDACP---------MGLAPLEMAARTRVDDFDGA---------SEYGLR 406 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 407 DCILCGCCAYVCPSHIPLVQ 426 >gi|86141390|ref|ZP_01059936.1| FAD linked oxidase-like [Leeuwenhoekiella blandensis MED217] gi|85831949|gb|EAQ50404.1| FAD linked oxidase-like [Leeuwenhoekiella blandensis MED217] Length = 975 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 15/136 (11%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 PH +V+ + R + LL + + + +C C Sbjct: 518 PHNVFNPGKLVNANPMDENLR----YTPDREEPEIDTLLNFDDSQGILRAAEQCNGTGDC 573 Query: 177 S-------TSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCH 228 T CPSY D A R +L S + + C Sbjct: 574 RKLPAAGGTMCPSYRATRDEKDSTRGRANALREFLTQSERKNSFNHKEL---KEVFDLCL 630 Query: 229 TIMNCTQSCPKGLNPA 244 + C CP ++ A Sbjct: 631 SCKACASECPSNVDVA 646 >gi|325280076|ref|YP_004252618.1| electron transport complex, RnfABCDGE type, C subunit [Odoribacter splanchnicus DSM 20712] gi|324311885|gb|ADY32438.1| electron transport complex, RnfABCDGE type, C subunit [Odoribacter splanchnicus DSM 20712] Length = 443 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 18/99 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +E + C+ C C ++CP L P +L++ ++ + R Sbjct: 353 LLINEKEAARRPMRNCIRCGKCVSACPM-------GLEPYLLMKLSQFNLLER------- 398 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + ++ C +C+ +CP I K Sbjct: 399 ----MEEEKVMDCIECGSCSFTCPSDRPLLDYIRLGKAR 433 >gi|323698797|ref|ZP_08110709.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. ND132] gi|323458729|gb|EGB14594.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans ND132] Length = 432 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 39/115 (33%), Gaps = 13/115 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 E + PK + + + E + L C+ C CS+ CP+ + P L Sbjct: 1 MGEAAQLLIEPKHSALVDKVKELLPEGGNLNMCLACGACSSGCPATGMHGMD---PRKFL 57 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + + + + + ++ C C +CP ++ + + + Sbjct: 58 RLALYGQE----------EEIRSTPWVWLCTMCRRCVHACPMEVDIPQLVYHCRQ 102 >gi|297584740|ref|YP_003700520.1| iron-sulfur cluster-binding protein [Bacillus selenitireducens MLS10] gi|297143197|gb|ADH99954.1| iron-sulfur cluster binding protein [Bacillus selenitireducens MLS10] Length = 477 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 13/97 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ CA C CP Y G P + L++ D+++ Sbjct: 307 YQSALQCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVLTPLLEGYDDYKEL------- 359 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT +CP + + + + + ++++ Sbjct: 360 ---PYASSLCAACTDACPVKIPLHELLIEHRKDIVEK 393 >gi|260904934|ref|ZP_05913256.1| iron-sulfur cluster binding protein [Brevibacterium linens BL2] Length = 504 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 17/101 (16%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C+ C CP Y Y GP ++ Sbjct: 328 HGRTALNCIRCSACMNVCPVYERTGGHAYGSTYPGPIGA------ILSPLMTGIE----- 376 Query: 218 LEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +E+ L Y C CP +N + + ++ ++ Sbjct: 377 VEENGSLPYASSLCGACYDVCPVKINIPEILVHLRGEDVEA 417 >gi|308186746|ref|YP_003930877.1| Electron transport complex protein rnfC [Pantoea vagans C9-1] gi|308057256|gb|ADO09428.1| Electron transport complex protein rnfC [Pantoea vagans C9-1] Length = 869 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y W D + + C Sbjct: 377 CIRCSACADACPAKLLPQQLY-----------WYSQGGDHDKAR-------AHHIDDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|296132460|ref|YP_003639707.1| putative anaerobic sulfite reductase, A subunit [Thermincola sp. JR] gi|296133453|ref|YP_003640700.1| putative anaerobic sulfite reductase, A subunit [Thermincola sp. JR] gi|296031038|gb|ADG81806.1| putative anaerobic sulfite reductase, A subunit [Thermincola potens JR] gi|296032031|gb|ADG82799.1| putative anaerobic sulfite reductase, A subunit [Thermincola potens JR] Length = 340 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 26/142 (18%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS--DRY 190 ++ + ++ L+ V K E + C+ C C+ CP+ D Sbjct: 201 MAKAKQMQISLEGVKEKLDNMW----EHPIWDNESLRCIGCGTCTYVCPTCHCFDIVDYN 256 Query: 191 LGPAILLQAYRWL-------------IDSRDEFQGE-------RLDNLEDPFRLYRCHTI 230 A + W R + +L D + + C Sbjct: 257 DQSAEGYRYRCWDSCQFSNFTRAAGGHQPRPSKKERIRQRFLHKLRYFVDRYGDFGCVGC 316 Query: 231 MNCTQSCPKGLNPAKAIAKIKM 252 C + CP L+ A+ I K+K Sbjct: 317 GRCLEKCPVNLDIAQIITKVKE 338 >gi|290475318|ref|YP_003468206.1| putative NADH dehydrogenase subunit/ oxidoreductase [Xenorhabdus bovienii SS-2004] gi|289174639|emb|CBJ81433.1| putative NADH dehydrogenase subunit/ oxidoreductase [Xenorhabdus bovienii SS-2004] Length = 668 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ + C+ C C +CP+ Y SR + Sbjct: 358 NCILAPSIQEMEPKTVEEACIRCGLCVEACPAGLLPQQLYWF-------------SRGQE 404 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 405 HKKAKN-----HHLFDCIECGACAYVCPSNIPLVQ 434 >gi|242280033|ref|YP_002992162.1| hypothetical protein Desal_2567 [Desulfovibrio salexigens DSM 2638] gi|242122927|gb|ACS80623.1| protein of unknown function DUF162 [Desulfovibrio salexigens DSM 2638] Length = 719 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 13/106 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 ++ ++ CV C C+ CP Y +G + + ++ + Sbjct: 299 RRALAKDPVFSQVHRCVRCGACANVCPVYRMVGGHKMGHIYIGAIGLILTYFYHGTEKAK 358 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C + C G++ I I+ +L+ Sbjct: 359 NL----------VQNCINCGACKEICAGGIDLPGLIKDIQARILEE 394 >gi|332653503|ref|ZP_08419248.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcaceae bacterium D16] gi|332518649|gb|EGJ48252.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcaceae bacterium D16] Length = 445 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 18/106 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K +L + + C+ C C +CP D +++AY + Sbjct: 352 KNNNAVLAFSKKFAHMPKATNCIHCGRCVNACPLGLAAKD-------IVKAY-------E 397 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E+L L C + C+ CP A +IA K+M+ Sbjct: 398 KGDVEQLQALNADL----CMSCGTCSFVCPAKRPLAPSIALAKIMM 439 >gi|111020469|ref|YP_703441.1| Fe-S protein [Rhodococcus jostii RHA1] gi|110819999|gb|ABG95283.1| possible Fe-S protein [Rhodococcus jostii RHA1] Length = 493 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 43/173 (24%), Gaps = 12/173 (6%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 240 NGRMCLTLPDTLITLMGIEKLVPTFTDLEVFMQLLPRSSTAERMNPYTSMWTGVHPGDGP 299 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + D + + L C+ C+ C CP Y G L Sbjct: 300 QNFHVVLLDNGRTNVLADEVGRSALHCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAIL 359 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 G N P + C +CP ++ + ++ +D Sbjct: 360 SPQLTGTTGHDDPNASLP---FASTLCGACFDACPVRIDIPSILVHLRAEQVD 409 >gi|19704872|ref|NP_602367.1| Iron-sulfur cluster-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328952|ref|ZP_06871460.1| iron-sulfur cluster-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19712759|gb|AAL93666.1| Iron-sulfur cluster-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153941|gb|EFG94751.1| iron-sulfur cluster-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 719 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAEIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + C GL+ + I K++ + Sbjct: 365 -----CLQCGRCNEVCGGGLHISDMIMKLREKNMK 394 >gi|217969124|ref|YP_002354358.1| FAD linked oxidase [Thauera sp. MZ1T] gi|217506451|gb|ACK53462.1| FAD linked oxidase domain protein [Thauera sp. MZ1T] Length = 1292 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 67/217 (30%), Gaps = 15/217 (6%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +D + L RS I G G+ I + L + Sbjct: 709 NLPVNSDHYEMLQTANRA---VDRIMALARSLDGVISGEHGIGITKLDYLTDDEMANFWS 765 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V P + K + + + E E + Sbjct: 766 YKEKVDPEGRFNRGKLMRKGPIRGNLDNAYTPSFNLMGHESLIMEQTDVGEIA---HDIK 822 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R ED Sbjct: 823 DCLRCGKCKPVCSTHVPRANLLYSPRNKILSTSLLIEAFLYEEQTRRGVSLAHWAEFEDV 882 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ K++ +L + Sbjct: 883 --ADHCTICHKCEKPCPVDIDFGDVSIKMRNLLRKQG 917 >gi|56477659|ref|YP_159248.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] gi|56313702|emb|CAI08347.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] Length = 468 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 7/93 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C CP Y G ++ + D Sbjct: 301 AGRFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGP-MGSVLTPLIKGLDAAYDLPN- 358 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP + + + +++ + Sbjct: 359 -----ACTLNGRCQSVCPVKIPLPELLRELRHL 386 >gi|116672683|ref|YP_833616.1| FAD linked oxidase domain-containing protein [Arthrobacter sp. FB24] gi|116612792|gb|ABK05516.1| FAD linked oxidase domain protein [Arthrobacter sp. FB24] Length = 941 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 7/110 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P L + + CV C C CPS D L P + R + + Sbjct: 516 DEDPLAHLRHIKTAPPVAEEVDRCVSCGYCEPVCPS----KDITLTPRQRIVTLRAIESA 571 Query: 207 R---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R D L+ + + C C +CP +N + K++ Sbjct: 572 RLAGDTALVRELEKDYEYESVDTCAVDGMCQTACPVDINTGSLVKKLRKD 621 >gi|127512996|ref|YP_001094193.1| electron transport complex protein RnfC [Shewanella loihica PV-4] gi|126638291|gb|ABO23934.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella loihica PV-4] Length = 870 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 22/125 (17%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + ++ L+ S ++ C+ C C+ +CP+ L Sbjct: 352 MLPNVAAPITKGTNCVLMPSEQEVAPPSPEQPCIRCGECAQACPAQLLPQQ--LFWHAKA 409 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 Q Y D+ + L C C+ CP + + A + ++ Sbjct: 410 QEY-------DKAA---------SYNLRDCIECGCCSYVCPSDIPLVEYYRVAKSALRQE 453 Query: 254 LLDRK 258 ++K Sbjct: 454 AEEKK 458 >gi|319955787|ref|YP_004167050.1| hypothetical protein Nitsa_0027 [Nitratifractor salsuginis DSM 16511] gi|319418191|gb|ADV45301.1| protein of unknown function DUF162 [Nitratifractor salsuginis DSM 16511] Length = 452 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP Y + + L RD + L + C Sbjct: 301 CIRCGACMNTCPVYRRSGGHSYQSVVPGPIGSALAGERDPGEYATLP--------FACTL 352 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +C CP ++ + + + + Sbjct: 353 CASCDAVCPVRIDLHDRLYEEREACVQ 379 >gi|308178574|ref|YP_003917980.1| iron-sulfur cluster binding protein [Arthrobacter arilaitensis Re117] gi|307746037|emb|CBT77009.1| iron-sulfur cluster binding protein [Arthrobacter arilaitensis Re117] Length = 483 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 32/183 (17%) Query: 93 DGTNTLACVKDMKDIKGAIAVY-PLPH---MSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +G L + + + + LPH + V L+ S + W Sbjct: 232 NGRMCL---TLPETLITVMGIEKVLPHWEDIEVFMQLLPRSSTGERMNPYTSLWTGVSED 288 Query: 149 KPAKELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAI 195 + + D + L C+ C+ C CP Y Y GP Sbjct: 289 DGPQNVHIVLLDNGRTRALADRFGRTALNCIRCSACMNVCPVYERTGGHAYGSTYPGPIG 348 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ +E+ L Y C +CP +N + + ++ Sbjct: 349 A------ILSPLMTGIE-----VEENGSLPYASSLCGACYDACPVKINIPEILVHLRGED 397 Query: 255 LDR 257 +D Sbjct: 398 VDA 400 >gi|302343567|ref|YP_003808096.1| hypothetical protein Deba_2137 [Desulfarculus baarsii DSM 2075] gi|301640180|gb|ADK85502.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfarculus baarsii DSM 2075] Length = 442 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++ K L C+ C CS CP S+ G + + YR L +D + Sbjct: 16 EKLKKANLNLCLTCGTCSGGCPITGNPSEDMQGM-DIRKVYRMLAYGM-------VDEVV 67 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + C C +CP ++ + +K + Sbjct: 68 NSRFPWLCTGCGRCAAACPMDIDTPAIMGYMKHL 101 >gi|51893122|ref|YP_075813.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Symbiobacterium thermophilum IAM 14863] gi|51856811|dbj|BAD40969.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Symbiobacterium thermophilum IAM 14863] Length = 406 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 10/96 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 I C+ C C CP + GP R GE ++ Sbjct: 1 MIHEYDACLKCTVCEMHCPVLRVAP-EFPGPKNGGPGLA-----RLRAAGEVVEL----D 50 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C CP G+ PA+ + K+ + R+ Sbjct: 51 HLDLCLGCRTCDTVCPSGIRPAELVNAPKVAQVSRR 86 >gi|258514562|ref|YP_003190784.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778267|gb|ACV62161.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 317 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C +CP + + + W+ S D + Sbjct: 195 QAYLAAEMSKCIRCYACRNACPMCYCSEC-----FVDCNTPEWISKSIDAGDNLIFHAVR 249 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 RC CT++CP G++ K K+ Sbjct: 250 ALHLGGRCVDCGACTRACPMGVDIGKLTRKL 280 >gi|229541988|ref|ZP_04431048.1| iron-sulfur cluster binding protein [Bacillus coagulans 36D1] gi|229326408|gb|EEN92083.1| iron-sulfur cluster binding protein [Bacillus coagulans 36D1] Length = 476 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ CA C CP Y G P + L+ D+++ Y Sbjct: 311 QCIRCAACINVCPVYRNIGGHSYGSIYPGPIGAVLSPLLGGYDKYKEL----------PY 360 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++ ++ Sbjct: 361 ASSLCGACTEACPVKIPLHELLIKHRQVIAEK 392 >gi|119896771|ref|YP_931984.1| iron-sulfur binding oxidase [Azoarcus sp. BH72] gi|119669184|emb|CAL93097.1| conserved hypothetical iron-sulfur binding oxidase [Azoarcus sp. BH72] Length = 1289 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 19/217 (8%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +D + L RS I G G+ I + L + Sbjct: 710 NIPVNSDHYEMLQTANRA---VDRIMALARSLDGVISGEHGIGITKLDYLTDAEMANFWA 766 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V P + K + + E + E + Sbjct: 767 YKQKVDPEGRFNRGKLMKGGNLDN----AYTPSFNLMGHESLIMEQTEIGEIA---HDIK 819 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A + +R ED Sbjct: 820 DCLRCGKCKPVCSTHVPRANLLYSPRNKILSTSLLVEAMLYEEQTRRGVSLAHWAEFEDV 879 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ K++ +L + Sbjct: 880 --ADHCTVCHKCEKPCPVDIDFGDVSIKMRNLLRKQG 914 >gi|302343452|ref|YP_003807981.1| hypothetical protein Deba_2022 [Desulfarculus baarsii DSM 2075] gi|301640065|gb|ADK85387.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfarculus baarsii DSM 2075] Length = 380 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 13/97 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + L +C+ C CS CP + + ++ A L+ E Sbjct: 14 AAMGGETLTQCMQCGLCSGLCP-WPAVGSEFRTRKLIRMA------------QMGLEGFE 60 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 LY C T C ++CP+ + + ++ M+ + Sbjct: 61 SDDILYACTTCKLCVENCPRQVGIIDTVRAMRAMIAE 97 >gi|294670946|ref|ZP_06735802.1| hypothetical protein NEIELOOT_02652 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307433|gb|EFE48676.1| hypothetical protein NEIELOOT_02652 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 395 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 28/86 (32%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFR 223 + C CP Y P L+ +Y R E +G R N+ D Sbjct: 126 WLFAHQMREQVCKYMCP-YARFQSAMFDPDTLVISYDTE---RGEPRGARKKNVGRDETD 181 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 182 LGDCINCTMCVQVCPVGIDIRDGLQY 207 >gi|257470433|ref|ZP_05634524.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium ulcerans ATCC 49185] gi|317064641|ref|ZP_07929126.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium ulcerans ATCC 49185] gi|313690317|gb|EFS27152.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium ulcerans ATCC 49185] Length = 436 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 22/144 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L V +D++ + + + K LL ++ C+ C Sbjct: 309 YILDQCGVNRDIMDKLVMGGPMMGMAQFSEEAPVIKGTSGLLALTKEETNPYKPKACIGC 368 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP L P + + + E E + L C +C Sbjct: 369 GKCIGACPML-------LEPIMFARLAAF------EQWEE-----IGKYNLMDCIECGSC 410 Query: 234 TQSCPKGLNPAKAI----AKIKMM 253 CP +AI +K++ M Sbjct: 411 AYICPANRPLTEAIKIGKSKLRAM 434 >gi|222524175|ref|YP_002568646.1| iron-sulfur cluster binding protein [Chloroflexus sp. Y-400-fl] gi|222448054|gb|ACM52320.1| iron-sulfur cluster binding protein [Chloroflexus sp. Y-400-fl] Length = 475 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 34/139 (24%), Gaps = 16/139 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY- 183 L V S R E + +S C+ C C +CP Y Sbjct: 264 LSVYTSLISGPARPGEEDGPEEFHLVLLDNGRSRILGGHYAESLLCIRCGACLNACPVYQ 323 Query: 184 ----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 Y GP + D D + L L C + CP Sbjct: 324 AIGGHAYGGVYSGPIGAILTPLLQPDLPDAY------LLPQASSL-----CGACQEVCPV 372 Query: 240 GLNPAKAIAKIKMMLLDRK 258 + + + + + Sbjct: 373 RIAIPDMLLRHRADAVKAG 391 >gi|260886255|ref|ZP_05897518.1| iron-sulfur cluster-binding protein [Selenomonas sputigena ATCC 35185] gi|330839759|ref|YP_004414339.1| Lactate utilization protein B/C [Selenomonas sputigena ATCC 35185] gi|260863974|gb|EEX78474.1| iron-sulfur cluster-binding protein [Selenomonas sputigena ATCC 35185] gi|329747523|gb|AEC00880.1| Lactate utilization protein B/C [Selenomonas sputigena ATCC 35185] Length = 725 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 6/90 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y+CV CA C CP + G L D + + C Sbjct: 311 YQCVRCASCLNVCPIWTLVGGNVYGHIYSGGIGAILTGLLDNGLKDFSKFSD------LC 364 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C Q CP + I +++ + Sbjct: 365 IGCRKCVQICPGKIPIPDIIDELRSRNVKE 394 >gi|154495866|ref|ZP_02034562.1| hypothetical protein BACCAP_00146 [Bacteroides capillosus ATCC 29799] gi|150275064|gb|EDN02112.1| hypothetical protein BACCAP_00146 [Bacteroides capillosus ATCC 29799] Length = 437 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP+ L + ++ +W R + C Sbjct: 354 SPCLRCGRCVEACPA----GLAPLFLHLYVRKGQWEALER--------------EHISAC 395 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C CP L +I K L Sbjct: 396 SECGACAYVCPAHLRLVHSIRVGKRRL 422 >gi|163751795|ref|ZP_02159012.1| electron transport complex protein RnfC [Shewanella benthica KT99] gi|161328359|gb|EDP99519.1| electron transport complex protein RnfC [Shewanella benthica KT99] Length = 620 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 34/115 (29%), Gaps = 22/115 (19%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 LL + ++ CV C C+ CP L Q Y Sbjct: 362 KGSNCILLPASDELAPEQKELPCVRCGECAHVCPVQLLPQQ--LFWHAQAQEY------- 412 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 D+ F L C CT CP + + IAK IK ++K Sbjct: 413 DKATK---------FNLADCIECGCCTYVCPSEIPLVEYYRIAKSAIKAEAEEKK 458 >gi|119476465|ref|ZP_01616816.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2143] gi|119450329|gb|EAW31564.1| electron transport complex protein RnfC [marine gamma proteobacterium HTCC2143] Length = 684 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 25/125 (20%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 E + L + ++ C+ C C+ CP+ Y Sbjct: 340 ENSNVPIVKTSNCILAPTVDELPPPTPAQACIRCGMCAEVCPASLLPQQLYWFSRGKE-- 397 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKM 252 + LED L C C+ +CP + + I + K Sbjct: 398 ---------------YEKLED-HNLMDCIECGACSYACPSNIPLVQYYRASKADIREQKQ 441 Query: 253 MLLDR 257 + Sbjct: 442 DAIKA 446 >gi|229585583|ref|YP_002844085.1| hypothetical protein M1627_2177 [Sulfolobus islandicus M.16.27] gi|238620546|ref|YP_002915372.1| hypothetical protein M164_2102 [Sulfolobus islandicus M.16.4] gi|228020633|gb|ACP56040.1| conserved hypothetical protein [Sulfolobus islandicus M.16.27] gi|238381616|gb|ACR42704.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4] Length = 619 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDIFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|227828353|ref|YP_002830133.1| hypothetical protein M1425_2095 [Sulfolobus islandicus M.14.25] gi|227460149|gb|ACP38835.1| conserved hypothetical protein [Sulfolobus islandicus M.14.25] Length = 619 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDIFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|325144726|gb|EGC67021.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M01-240013] gi|325205792|gb|ADZ01245.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M04-240196] Length = 498 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|317484907|ref|ZP_07943796.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923845|gb|EFV45042.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 431 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 16/93 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLDNL 218 D L C+ C C CP Y + A+R + D + + Sbjct: 15 DDKLAACMKCGFCQAFCPMYMTTRIEGDLTRGKIALVENLAHRIIEDP---------EAV 65 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +L RC +C +CP G+ + + Sbjct: 66 N--EKLSRCLLCGSCQANCPSGVKTTDIFLEAR 96 >gi|226330217|ref|ZP_03805735.1| hypothetical protein PROPEN_04130 [Proteus penneri ATCC 35198] gi|225201012|gb|EEG83366.1| hypothetical protein PROPEN_04130 [Proteus penneri ATCC 35198] Length = 530 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L+ S E+ + C+ C C +CPS +L Q W ++ Sbjct: 86 NCLLIPSVEEMDTDNLEEACIRCGHCVDACPS-----------GLLPQQLYWFSKGKEHE 134 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L+ C C CP + + Sbjct: 135 KAQ-------QHNLFDCIECGACAFVCPSNIPLVQ 162 >gi|159905200|ref|YP_001548862.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus maripaludis C6] gi|159886693|gb|ABX01630.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus maripaludis C6] Length = 375 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 80/272 (29%), Gaps = 48/272 (17%) Query: 1 MVEIMLPKRSRVKRGKIWNA---------PTGEKNLKEYRIYRWNPDNKGNPCMDT--YY 49 M L KR ++ + KI+ P K + E Y +P++ +D + Sbjct: 99 MAINELEKRHQIDKDKIYTIGLNCGGTVPPQTAKKMIEL-FYDVDPEDVIKEEIDKGKFI 157 Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIK 108 ++L + + + R C C + + LAC + Sbjct: 158 IELKDGSEKSVKIDELEEEGY---------GRRTNCQRCELKVPRNADLACGNWGAEKGW 208 Query: 109 GAIAVYPLPHMSVIKD--------LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 + V ++K+ + IE + + K KE L Sbjct: 209 TFVEVGSEKGEELLKNAQKEGYINVKAPSEKALEIRGKIEKSMINLGKKFQKEHLDEKYP 268 Query: 161 RQKIDGLYE--CVMCACCSTSCPSY----WWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + Y C+ C C CP + YL + D FQG R Sbjct: 269 APEKWNEYWSRCIKCYGCRDVCPICFCKECALGEDYLDKGTIP------PDP-IMFQGIR 321 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 L ++ + C C CP + AK Sbjct: 322 LSHMS-----FSCINCGQCEDVCPVEIPLAKI 348 >gi|220935380|ref|YP_002514279.1| heterodisulfide reductase subunit C [Thioalkalivibrio sp. HL-EbGR7] gi|219996690|gb|ACL73292.1| heterodisulfide reductase subunit C [Thioalkalivibrio sp. HL-EbGR7] Length = 238 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 20/155 (12%) Query: 108 KGAIAVYPLP---HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 + P H S++ D V H+ + + + L E+ Sbjct: 4 HEKSLIEPERLLNHESLVVDGVDVSGHWNTMIAPRTIRDYDDDFEAKIQKLGGGENVH-- 61 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C C C+ SC Y N + W+ +R + E ++D + Sbjct: 62 ----RCWQCGSCTNSCTMYAQN--------VQFNPRYWIYLTRLGLKEE---IIKDKDIV 106 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++C + CT CPK + P + + + + I Sbjct: 107 WQCVSCNKCTNICPKDVRPEGVMKALAHWMEEEGI 141 >gi|289642325|ref|ZP_06474473.1| protein of unknown function DUF162 [Frankia symbiont of Datisca glomerata] gi|289507857|gb|EFD28808.1| protein of unknown function DUF162 [Frankia symbiont of Datisca glomerata] Length = 281 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 10/97 (10%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C+ C SCP Y G P + L++ D E L Sbjct: 79 RQALRCIRCSACLNSCPVYERTGGHAYGSVYPGPIGAILTPLLNGVDAGPVE--KALPYA 136 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + CP ++ + + ++ ++D Sbjct: 137 SSL-----CGRCFEVCPVRIDIPEVLVHLRGQVVDAA 168 >gi|149191415|ref|ZP_01869666.1| uncharacterized conserved protein containing a ferredoxin-like domain [Vibrio shilonii AK1] gi|148834764|gb|EDL51750.1| uncharacterized conserved protein containing a ferredoxin-like domain [Vibrio shilonii AK1] Length = 477 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D+ + L Sbjct: 311 QCIRCGACMNHCPVYTKIGGHAYGTVYPGPIGKIISPHLL--GIDKTKD-----LVTASS 363 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + CP + + + +++ Sbjct: 364 L-----CGACGEVCPVRIPIPEMLLRLRKEA 389 >gi|301059075|ref|ZP_07200029.1| putative glycolate oxidase, subunit GlcD [delta proteobacterium NaphS2] gi|300446808|gb|EFK10619.1| putative glycolate oxidase, subunit GlcD [delta proteobacterium NaphS2] Length = 866 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 6/90 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C CP++ ++ E E + Y C T Sbjct: 494 CICCGFCRLGCPTFSITHRESKNARGRNVLAFNFLNGTVEPSKEFI------ESFYTCAT 547 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +CT CP + + + ++ L + Sbjct: 548 CQSCTYFCPAQVKVDEIVKGVREKLYKDGL 577 >gi|258653863|ref|YP_003203019.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] gi|258557088|gb|ACV80030.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] Length = 966 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 7/114 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + CV C C CPS D P + R + + Sbjct: 538 TDDDQAHLRDLKVTPTVEQEVDRCVECGYCEPVCPSR----DLTTTPRQRIVLRREMQRA 593 Query: 207 RDEFQGERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R+ L LE D + C C +CP +N + +++ + + Sbjct: 594 REAGDTALLAELEQEYDYDGVQTCAVDGMCQTACPVLINTGDLVRRLRAESVGK 647 >gi|146339272|ref|YP_001204320.1| putative oxidoreductase [Bradyrhizobium sp. ORS278] gi|146192078|emb|CAL76083.1| putative oxidoreductase [Bradyrhizobium sp. ORS278] Length = 983 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 9/110 (8%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +P + L+S + I G +C+ C C CPS + P + R + Sbjct: 547 TRNPNLHMQNLKSVPQIEGIMGSSQCIECGFCEPVCPSRNVT----MTPRQRIVLRREMA 602 Query: 205 DSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + + L L+ + C C CP G+N I +++ Sbjct: 603 --RQQPGSDMLAQLQSDYQYDGIETCAGDGTCAIPCPIGINTGAVIKELR 650 >gi|260914539|ref|ZP_05921007.1| iron-sulfur cluster binding protein [Pasteurella dagmatis ATCC 43325] gi|260631330|gb|EEX49513.1| iron-sulfur cluster binding protein [Pasteurella dagmatis ATCC 43325] Length = 467 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 13/91 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP+Y G P + ++ DEF+ L + Sbjct: 311 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVISPILGGYDEFKD--LPSA------- 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C Q CP + A + K + + + Sbjct: 362 -CSLCTACNQVCPVKIPLAHLLLKHRRNIAE 391 >gi|227832869|ref|YP_002834576.1| hypothetical protein cauri_1041 [Corynebacterium aurimucosum ATCC 700975] gi|262182643|ref|ZP_06042064.1| hypothetical protein CaurA7_01510 [Corynebacterium aurimucosum ATCC 700975] gi|227453885|gb|ACP32638.1| hypothetical protein cauri_1041 [Corynebacterium aurimucosum ATCC 700975] Length = 501 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 47/174 (27%), Gaps = 24/174 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWSGVTEGDGP 301 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + L +C+ C+ C CP Y Y GP + Sbjct: 302 QNFHIVLLDNGRTAALSSPKGHEALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGI-- 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 S D+ + L Y C C + CP + ++ I + + Sbjct: 360 -------SLTPQLTGMKDHNDPSASLPYACSLCGRCDEVCPVRIPLSQVILENR 406 >gi|261392285|emb|CAX49808.1| putative ferredoxin [Neisseria meningitidis 8013] Length = 498 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|253582593|ref|ZP_04859814.1| NADH dehydrogenase [Fusobacterium varium ATCC 27725] gi|251835463|gb|EES64003.1| NADH dehydrogenase [Fusobacterium varium ATCC 27725] Length = 436 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 22/144 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L V +D++ + + + K LL ++ C+ C Sbjct: 309 YILDQCGVNRDVMDKLVMGGPMMGMAQFSEEAPVIKGTSGLLALTKEETNPYKPKACIGC 368 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP L P + + + E E + L C +C Sbjct: 369 GKCIGACPML-------LEPIMFARLAAF------EQWEE-----IGKYNLMDCIECGSC 410 Query: 234 TQSCPKGLNPAKAI----AKIKMM 253 CP +AI +K++ M Sbjct: 411 AYICPANRPLTEAIKIGKSKLRAM 434 >gi|15677310|ref|NP_274465.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis MC58] gi|121635142|ref|YP_975387.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|7226695|gb|AAF41813.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58] gi|120866848|emb|CAM10607.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|254672115|emb|CBA04839.1| probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Neisseria meningitidis alpha275] gi|308389140|gb|ADO31460.1| putative ferredoxin [Neisseria meningitidis alpha710] gi|316984591|gb|EFV63556.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis H44/76] gi|325130502|gb|EGC53257.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis OX99.30304] gi|325132618|gb|EGC55309.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M6190] gi|325136500|gb|EGC59104.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M0579] gi|325138133|gb|EGC60706.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis ES14902] gi|325140602|gb|EGC63122.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis CU385] gi|325142647|gb|EGC65037.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis 961-5945] gi|325198590|gb|ADY94046.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis G2136] gi|325199931|gb|ADY95386.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis H44/76] Length = 498 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|84497329|ref|ZP_00996151.1| putative iron-sulfur protein [Janibacter sp. HTCC2649] gi|84382217|gb|EAP98099.1| putative iron-sulfur protein [Janibacter sp. HTCC2649] Length = 505 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 15/99 (15%) Query: 165 DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y Y GP + R Sbjct: 321 RQALRCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAV----LNPQLRGTASE------V 370 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D Y C +CP +N + + +++ + + Sbjct: 371 DQSLPYASSLCGACFDACPVRINIPELLVELRGTVAQQG 409 >gi|323478149|gb|ADX83387.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Sulfolobus islandicus HVE10/4] Length = 619 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDIFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|229004158|ref|ZP_04161959.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock1-4] gi|228757019|gb|EEM06263.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock1-4] Length = 473 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + ++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEE 391 >gi|161870324|ref|YP_001599494.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis 053442] gi|218768456|ref|YP_002342968.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|254805235|ref|YP_003083456.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Neisseria meningitidis alpha14] gi|304387157|ref|ZP_07369401.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis ATCC 13091] gi|121052464|emb|CAM08801.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|161595877|gb|ABX73537.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis 053442] gi|254668777|emb|CBA06693.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Neisseria meningitidis alpha14] gi|254669850|emb|CBA04270.1| probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Neisseria meningitidis alpha153] gi|304338761|gb|EFM04871.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis ATCC 13091] gi|325134565|gb|EGC57209.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M13399] gi|325201847|gb|ADY97301.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M01-240149] gi|325208401|gb|ADZ03853.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis NZ-05/33] Length = 498 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|315926232|ref|ZP_07922431.1| iron-sulfur cluster-binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620492|gb|EFV00474.1| iron-sulfur cluster-binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 724 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +Y C+ C C CP++ G + L+ + +R D +++ Sbjct: 314 FREIYNCIRCGACLDVCPAFALLGGHVYGSNVYTGGIGTLL-THFLVSEDRADQIQNI-- 370 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + C GL+ A+ I K++ + + Sbjct: 371 ---CLQCKRCNEVCGGGLHIAEMILKLREKSVAK 401 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 2/27 (7%) Query: 214 RLDNLEDPF--RLYRCHTIMNCTQSCP 238 R + L D +Y C C CP Sbjct: 305 RREILADKDFREIYNCIRCGACLDVCP 331 >gi|290952887|ref|ZP_06557508.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. holarctica URFT1] gi|295313932|ref|ZP_06804497.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. holarctica URFT1] Length = 436 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 6/98 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDP 221 +C+ C C + CPS + L P L Y+ ++ D+ + + Sbjct: 38 DKQADKCLECGFCESVCPSRELS----LTPRQRLSVYKEMMILKETDKAKYKDYKEKYQY 93 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP +N I + I Sbjct: 94 HGIDTCAATGLCGVQCPVDINTGSFIKDFRAEQNKANI 131 >gi|325204441|gb|ADY99894.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis M01-240355] Length = 498 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|256027541|ref|ZP_05441375.1| Iron-sulfur cluster-binding protein [Fusobacterium sp. D11] gi|289765500|ref|ZP_06524878.1| iron-sulfur cluster-binding protein [Fusobacterium sp. D11] gi|289717055|gb|EFD81067.1| iron-sulfur cluster-binding protein [Fusobacterium sp. D11] Length = 719 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ C+ C C CP++ G + ++ + ER +++ Sbjct: 306 PDFREIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTML-THFLVSEERAAKIQNI 364 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C GL+ + I K++ + Sbjct: 365 -----CLQCGRCNDVCGGGLHISDMIMKLREKNMKE 395 >gi|253995869|ref|YP_003047933.1| FAD linked oxidase domain-containing protein [Methylotenera mobilis JLW8] gi|253982548|gb|ACT47406.1| FAD linked oxidase domain protein [Methylotenera mobilis JLW8] Length = 1289 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 166 GLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C+ C C C ++ + ++ LG ++L++A+ + +R + D Sbjct: 817 DISDCLRCGKCKPVCSTHVPRANLLYSPRNKILGTSLLIEAFLYEEQTRRGISIKHFDEF 876 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C + CP ++ K++ L ++ Sbjct: 877 NDV--ADHCTVCHRCEKPCPVDIDFGDVSIKMRNFLREQG 914 >gi|78043677|ref|YP_361203.1| putative reductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77995792|gb|ABB14691.1| putative reductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 430 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 17/104 (16%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILL----QAYRWLIDS-----------RDEFQ 211 L C C C SC Y D PA + YR RD F Sbjct: 22 LEVCAHCGICKDSCHYYRATQDPVHTPAYKAEKLRKIYRRYFTPTGKLFPGLVGARD-FD 80 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E L+D C CT +CP G++ + + ML Sbjct: 81 EEYARELKDI-AFGSCTMCRRCTINCPMGIDTGLIVRTARAMLA 123 >gi|301063606|ref|ZP_07204120.1| putative CoB--CoM heterodisulfide reductase, subunit C [delta proteobacterium NaphS2] gi|300442254|gb|EFK06505.1| putative CoB--CoM heterodisulfide reductase, subunit C [delta proteobacterium NaphS2] Length = 156 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP D PA +++ + + + + LE PF ++ C + Sbjct: 29 CFTCRTCVAGCPMSAV--DDAFNPARIIRMALYGM---------KKEILESPF-IWLCSS 76 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+G+ + +K M + Sbjct: 77 CYTCQERCPQGVRITDFMTLLKNMAVREG 105 >gi|206559244|ref|YP_002230005.1| putative iron-sulphur cluster containing protein [Burkholderia cenocepacia J2315] gi|198035282|emb|CAR51157.1| putative iron-sulphur cluster containing protein [Burkholderia cenocepacia J2315] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|171321801|ref|ZP_02910707.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MEX-5] gi|171092920|gb|EDT38166.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MEX-5] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|170699677|ref|ZP_02890714.1| iron-sulfur cluster binding protein [Burkholderia ambifaria IOP40-10] gi|170135433|gb|EDT03724.1| iron-sulfur cluster binding protein [Burkholderia ambifaria IOP40-10] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|172061713|ref|YP_001809365.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MC40-6] gi|171994230|gb|ACB65149.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MC40-6] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|219849589|ref|YP_002464022.1| iron-sulfur cluster binding protein [Chloroflexus aggregans DSM 9485] gi|219543848|gb|ACL25586.1| iron-sulfur cluster binding protein [Chloroflexus aggregans DSM 9485] Length = 473 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 16/94 (17%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP Y Y GP + D D + L L Sbjct: 309 CIRCGACLNACPVYQAIGGHAYGGVYSGPIGAILTPLLQPDLPDAY------LLPQASSL 362 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP + + + + + Sbjct: 363 -----CGACQEVCPVRIAIPDMLLRHRADAVKAG 391 >gi|78067552|ref|YP_370321.1| Iron-sulfur cluster binding protein [Burkholderia sp. 383] gi|77968297|gb|ABB09677.1| Iron-sulfur cluster binding protein [Burkholderia sp. 383] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|83313229|ref|YP_423493.1| ferredoxin-like domain-containing protein [Magnetospirillum magneticum AMB-1] gi|82948070|dbj|BAE52934.1| Uncharacterized conserved protein containing a ferredoxin-like domain [Magnetospirillum magneticum AMB-1] Length = 478 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 9/89 (10%) Query: 169 ECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C CP Y Y E LD D Sbjct: 313 RCIRCAACMNHCPVYTRVGGHTYTFTYPGPIGKLLTPQ------IEGLDCAGDQPHAS-- 364 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + + +++ + Sbjct: 365 TLCRACADVCPVQIPIPDLLVRLRTESVR 393 >gi|115352856|ref|YP_774695.1| iron-sulfur cluster binding protein [Burkholderia ambifaria AMMD] gi|115282844|gb|ABI88361.1| iron-sulfur cluster binding protein [Burkholderia ambifaria AMMD] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPTAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|145219605|ref|YP_001130314.1| electron transport complex, RnfABCDGE type, C subunit [Prosthecochloris vibrioformis DSM 265] gi|145205769|gb|ABP36812.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP WL+ +E Q RLD E + L C Sbjct: 364 RTCIRCGKCIDACPQGLEP---------------WLL--GNEAQFRRLDEAE-LYGLANC 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +CT CP I K ++ +RK Sbjct: 406 TECGSCTFVCPSKRELVHWIKYAKALVNNRK 436 >gi|167751857|ref|ZP_02423984.1| hypothetical protein ALIPUT_00099 [Alistipes putredinis DSM 17216] gi|167660098|gb|EDS04228.1| hypothetical protein ALIPUT_00099 [Alistipes putredinis DSM 17216] Length = 449 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C ++CP L P ++ + R ERL+ + C Sbjct: 366 SSCIKCAKCVSACPM-------GLEPYLMAKLSR-------RKLWERLEA----EWVTNC 407 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C +CP + I K + Sbjct: 408 IECGCCQFTCPADIPLLDFIRMGKQEV 434 >gi|52548768|gb|AAU82617.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured archaeon GZfos18F2] Length = 312 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 5/121 (4%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + ++ V+ E + + + + ++R D L C+ C C C Sbjct: 156 IHRNPVIYDELVADAVEEQEDVDRYEDVRRIEAMPSEKKERFFEDLLSPCIRCYACRNVC 215 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P + + +W+ D L RC C ++CP G Sbjct: 216 PLCYCPTCFVDESRP-----QWVGKGIDSADIMTFHFLRAFHGAGRCTDCGACERACPTG 270 Query: 241 L 241 + Sbjct: 271 I 271 >gi|114563959|ref|YP_751473.1| FAD linked oxidase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335252|gb|ABI72634.1| FAD linked oxidase domain protein [Shewanella frigidimarina NCIMB 400] Length = 934 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A+L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIAVLREIER-LEQSGDKKAAAEMRASSKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 IDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|292490550|ref|YP_003525989.1| FAD linked oxidase [Nitrosococcus halophilus Nc4] gi|291579145|gb|ADE13602.1| FAD linked oxidase domain protein [Nitrosococcus halophilus Nc4] Length = 1284 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 9/98 (9%) Query: 164 IDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + +C+ C C C ++ + D+ L +L++A+ + +R Sbjct: 809 NNDIKDCLRCGKCKPVCTTHVPRANLLYSPRDKILATGLLIEAFLYEEQTRRGISVRHFG 868 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D C C CP ++ K++ +L Sbjct: 869 EMNDV--ADHCTICHKCESPCPVNIDFGDVTIKMRSIL 904 >gi|224368546|ref|YP_002602709.1| FdhB4 [Desulfobacterium autotrophicum HRM2] gi|223691262|gb|ACN14545.1| FdhB4 [Desulfobacterium autotrophicum HRM2] Length = 282 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 7/92 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C +CP ++ + L W + + Sbjct: 153 WQREFEKCIKCYGCRNACPLCNCSACK-------LADNLWGSQGQIPADPVSFHLIRAFH 205 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP G+ ++ L Sbjct: 206 LADTCVGCGACQDACPVGIPLTLLQLPMRRAL 237 >gi|281421183|ref|ZP_06252182.1| iron-sulfur cluster binding protein [Prevotella copri DSM 18205] gi|281404718|gb|EFB35398.1| iron-sulfur cluster binding protein [Prevotella copri DSM 18205] Length = 457 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 31/192 (16%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL----PHMSVIKDLVVD-------- 128 G C + + N K A+ + L ++V + L+ Sbjct: 206 GVAATGDCVVCTNEGNADMTTSMPKLHIVAMGIEKLVPDYKSLAVFQRLLCRCGTGQPTT 265 Query: 129 -MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + + Q R + ++L + +C+ C C +CP Y + Sbjct: 266 AFTSHFRQARPGAEMHVVLVDNGRSDILADKD----HWQTLKCMRCGACMNTCPVYRRSG 321 Query: 188 D---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y P + L + + + + C ++C CP + P Sbjct: 322 GYSYTYFIPGPIGVNLGMLKNPQ-----------KYSDNVSACTLCLSCDNVCPSKVGPG 370 Query: 245 KAIAKIKMMLLD 256 I + L Sbjct: 371 SQIYVWRQSLEK 382 >gi|220925073|ref|YP_002500375.1| formate dehydrogenase subunit alpha [Methylobacterium nodulans ORS 2060] gi|219949680|gb|ACL60072.1| formate dehydrogenase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 988 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 43/234 (18%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACVKD--- 103 ++ L + P L + + C +C + I+G LA Sbjct: 76 EPVEARPGETLWAVAQRLGNPIPHLCHKPAPGYRPDGNCRACMVEIEGERVLAASCKRVP 135 Query: 104 ---------------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + + + V P + D SHF++Q + Sbjct: 136 AVGMKVKTQSDRAVKARAMVMELLVADQPERATSHD---PDSHFWAQADGVGVTQSRFPS 192 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + SH L C+ C C +C N ++ AYR Sbjct: 193 EARWQPDASHPA--MRVNLDACIQCNLCVRACREVQVND-------VIGMAYR------- 236 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLL--DRKI 259 + + + +DP C C Q+CP G L PA + + + ++ DR + Sbjct: 237 NADAKVVFDFDDPMGQSTCVACGECVQACPTGALMPAAYLNEAQERVVYPDRAV 290 >gi|220919681|ref|YP_002494984.1| formate dehydrogenase, alpha subunit [Methylobacterium nodulans ORS 2060] gi|219952101|gb|ACL62492.1| formate dehydrogenase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 988 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 43/234 (18%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACVKD--- 103 ++ L + P L + + C +C + I+G LA Sbjct: 76 EPVEARPGETLWAVAQRLGNPIPHLCHKPAPGYRPDGNCRACMVEIEGERVLAASCKRVP 135 Query: 104 ---------------MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 + + + V P + D SHF++Q + Sbjct: 136 AVGMKVKTQSDRAVKARAMVMELLVADQPERATSHD---PDSHFWAQADGVGVTQSRFPS 192 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + SH L C+ C C +C N ++ AYR Sbjct: 193 EARWQPDASHPA--MRVNLDACIQCNLCVRACREVQVND-------VIGMAYR------- 236 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLL--DRKI 259 + + + +DP C C Q+CP G L PA + + + ++ DR + Sbjct: 237 NADAKVVFDFDDPMGQSTCVACGECVQACPTGALMPAAYLNEAQERVVYPDRAV 290 >gi|332161837|ref|YP_004298414.1| electron transport complex protein RnfC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666067|gb|ADZ42711.1| electron transport complex protein RnfC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 618 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + ++ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNIFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|325128524|gb|EGC51400.1| cytochrome c oxidase accessory protein CcoG [Neisseria meningitidis N1568] Length = 498 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|323475428|gb|ADX86034.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Sulfolobus islandicus REY15A] Length = 619 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 19/86 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGEQTNDIFHTPLGFYSISYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 CH C Q CP L+ K +++ Sbjct: 328 CHMCGLCEQVCPVRLDITK---ELRK 350 >gi|318605660|emb|CBY27158.1| electron transport complex protein RnfC [Yersinia enterocolitica subsp. palearctica Y11] Length = 618 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + ++ C Sbjct: 377 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNIFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|229160355|ref|ZP_04288353.1| Uncharacterized electron transport protein ykgF [Bacillus cereus R309803] gi|228623079|gb|EEK79907.1| Uncharacterized electron transport protein ykgF [Bacillus cereus R309803] Length = 473 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|227500380|ref|ZP_03930442.1| iron-sulfur cluster-binding protein [Anaerococcus tetradius ATCC 35098] gi|227217443|gb|EEI82762.1| iron-sulfur cluster-binding protein [Anaerococcus tetradius ATCC 35098] Length = 719 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 18/99 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR------YLGPAILLQAYRWLIDSRDEFQGERLDN 217 ++ C+ C C CP++ Y G L + + DE + +++ Sbjct: 309 YREIFNCIRCGACLDICPAFALVGGHVYGSNVYTGGIGTLLTHFLI----DENRASEIES 364 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C C + C GL A+ I I+ + Sbjct: 365 V--------CLQCGRCNEVCGGGLPIAQMIMGIREENVK 395 >gi|330864200|emb|CBX74261.1| electron transport complex protein rnfC [Yersinia enterocolitica W22703] Length = 412 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP+ Y SR E + + ++ C Sbjct: 216 CIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN-----HNIFDCIE 257 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 258 CGACAYVCPSNIPLVQ 273 >gi|322379576|ref|ZP_08053913.1| conserved hypothetical iron-sulfur protein [Helicobacter suis HS1] gi|322379637|ref|ZP_08053958.1| conserved hypothetical iron-sulfur protein [Helicobacter suis HS5] gi|321147931|gb|EFX42510.1| conserved hypothetical iron-sulfur protein [Helicobacter suis HS5] gi|321147970|gb|EFX42533.1| conserved hypothetical iron-sulfur protein [Helicobacter suis HS1] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 17/95 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C CP Y Y GP ++ + D + + NL Sbjct: 308 YYKALSCIRCGTCLNHCPVYDKIGGHAYLATYPGPIGVVITPQLF--GLDTYG--HIANL 363 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + CP + + I ++ Sbjct: 364 --------CSLCGRCGEVCPVKIPLPELIRDLRAE 390 >gi|237748027|ref|ZP_04578507.1| rnfC protein [Oxalobacter formigenes OXCC13] gi|229379389|gb|EEO29480.1| rnfC protein [Oxalobacter formigenes OXCC13] Length = 426 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 23/89 (25%), Gaps = 18/89 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP P + +R + L C Sbjct: 352 ENCIGCGRCIDACPMRLM-------PLKYAEGWRLGN-----------LVMMKRHDLNLC 393 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + +I K L + Sbjct: 394 VECGACESVCPSNVPLMASIFSGKARLRE 422 >gi|332654904|ref|ZP_08420646.1| electron transport complex protein RnfC [Ruminococcaceae bacterium D16] gi|332516247|gb|EGJ45855.1| electron transport complex protein RnfC [Ruminococcaceae bacterium D16] Length = 120 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 18/95 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ CV C C ++CP L P ++ +A R + E LDNL Sbjct: 39 QEHNVNQPEMVCVKCGHCVSACPM-------DLNPVLVYRAMRL-------GEKELLDNL 84 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C C+ CP + + + K Sbjct: 85 H----LEDCMDCGCCSYICPSHIPLMDLMRQAKKE 115 >gi|300868077|ref|ZP_07112714.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300333915|emb|CBN57892.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 234 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +D G+ C+ C C+ CP+ +N P ++ + D + ++ Sbjct: 9 KQDILYQHGMNACLNCGVCTAVCPAAEFND---YSPREVMNICQSESD-------DWIEE 58 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L +++ C +C C +G + A I ++ + + Sbjct: 59 LLKSDKIWYCGQCFSCKTRCTRGNSTASVILALRRLSVRHG 99 >gi|188591926|ref|YP_001796524.1| electron transport protein, iron-sulfur cluster binding prot [Cupriavidus taiwanensis LMG 19424] gi|170938300|emb|CAP63285.1| putative electron transport protein, iron-sulfur cluster binding prot [Cupriavidus taiwanensis LMG 19424] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD-----LATASS 369 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + CP + + + +++ Sbjct: 370 L-----CGACGEVCPVRIPIPQLLVRLRTEA 395 >gi|116694051|ref|YP_728262.1| Iron-sulfur cluster-binding protein [Ralstonia eutropha H16] gi|113528550|emb|CAJ94897.1| Iron-sulfur cluster-binding protein [Ralstonia eutropha H16] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD-----LATASS 369 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + CP + + + +++ Sbjct: 370 L-----CGACGEVCPVRIPIPQLLVRLRTEA 395 >gi|91788667|ref|YP_549619.1| formate dehydrogenase subunit alpha [Polaromonas sp. JS666] gi|91697892|gb|ABE44721.1| NAD-dependent formate dehydrogenase iron-sulfur protein / NAD-dependent formate dehydrogenase catalytic subunit [Polaromonas sp. JS666] Length = 945 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 60/205 (29%), Gaps = 49/205 (23%) Query: 72 PTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD------ 124 P L + G C SC + I+G LA P M V+ D Sbjct: 46 PHLCYKEGMEAVGNCRSCMVEINGERVLAPSCCRA---------PTAGMKVVTDSERAVA 96 Query: 125 ---------LVVDMSHFYSQHRSIEPWLKTVS-----PKPAKELLQSHEDRQKIDGLYEC 170 L Y+++ ++ W + + +++ Q L C Sbjct: 97 SQKMVLELLLSDMPEKAYTRNNEVDQWASKIGVGKPRFEARQQVRQDLSHPAIAVNLDAC 156 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N +G A + + D ++D C Sbjct: 157 IQCTRCLRACRDEQVND--VIGLAFRGDQAKIVFD------------MDDAMGASTCVAC 202 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLL 255 C Q+CP G A+ + L Sbjct: 203 GECVQACPTG-----ALMPAREAAL 222 >gi|261400837|ref|ZP_05986962.1| cytochrome c oxidase accessory protein CcoG [Neisseria lactamica ATCC 23970] gi|269209294|gb|EEZ75749.1| cytochrome c oxidase accessory protein CcoG [Neisseria lactamica ATCC 23970] Length = 498 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|114769565|ref|ZP_01447175.1| formate dehydrogenase, alpha subunit [alpha proteobacterium HTCC2255] gi|114549270|gb|EAU52152.1| formate dehydrogenase, alpha subunit [alpha proteobacterium HTCC2255] Length = 919 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 32/177 (18%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM-----SVIKDLVVDMSHFYSQ 135 +G C +C + IDG TLA + + V H ++ +L+V + Sbjct: 46 SDGNCRACMVEIDGERTLAASCL-RTPTPDMVVKTESHRAKSARKMVMELLVTDQPSNEK 104 Query: 136 ----------HRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSY 183 +E ++ P+ E + +D L C+ C C +C Sbjct: 105 AHDKSSHLWDMAKLEDVSESRFPELEIERIPLLDDSHVAMNVNLDACIQCNLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + + D ++DP C C Q+CP G Sbjct: 165 QVND--VIGLAGRGHDAKIVFD------------MDDPMGESSCVACGECVQACPTG 207 >gi|46580809|ref|YP_011617.1| heterodisulfide reductase subunit C [Desulfovibrio vulgaris str. Hildenborough] gi|120601874|ref|YP_966274.1| heterodisulfide reductase, C subunit [Desulfovibrio vulgaris DP4] gi|46450229|gb|AAS96877.1| heterodisulfide reductase, C subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120562103|gb|ABM27847.1| heterodisulfide reductase, C subunit [Desulfovibrio vulgaris DP4] gi|311234515|gb|ADP87369.1| heterodisulfide reductase subunit C [Desulfovibrio vulgaris RCH1] Length = 186 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 13/94 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L C C C+ CP + + Q R L Q R + + + + Sbjct: 24 QDLSHCYQCGNCTAGCP------CGFAYDIQVSQIMRNL-------QAGRKEKVLNSRSI 70 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + +CT CP ++ A+ + ++ M Sbjct: 71 WLCLSCSSCTTRCPNNIDVARVMDVLRHMARREG 104 >gi|134296949|ref|YP_001120684.1| iron-sulfur cluster binding protein [Burkholderia vietnamiensis G4] gi|134140106|gb|ABO55849.1| iron-sulfur cluster binding protein [Burkholderia vietnamiensis G4] Length = 481 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + + L D L + Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLL--GLDATAD--LPSAS---- 368 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ----TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|313668197|ref|YP_004048481.1| ferredoxin [Neisseria lactamica ST-640] gi|313005659|emb|CBN87102.1| putative ferredoxin [Neisseria lactamica 020-06] Length = 498 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|297183931|gb|ADI20052.1| hypothetical protein [uncultured alpha proteobacterium EB080_L11F12] Length = 919 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 32/177 (18%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM-----SVIKDLVVDMSHFYSQ 135 +G C +C + IDG TLA + + V H ++ +L+V + Sbjct: 46 SDGNCRACMVEIDGERTLAASCI-RTPTPDMVVKTESHRAKSARKMVMELLVTDQPSNEK 104 Query: 136 ----------HRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSY 183 ++E ++ P+ E + +D L C+ C C +C Sbjct: 105 AHDKSSHLWDMATLEDVSESRFPELEIERIPLLDDSHVAMNVNLDACIQCNLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + + D ++DP C C Q+CP G Sbjct: 165 QVND--VIGLAGRGHDAKIVFD------------MDDPMGESSCVACGECVQACPTG 207 >gi|296273194|ref|YP_003655825.1| hypothetical protein Arnit_1664 [Arcobacter nitrofigilis DSM 7299] gi|296097368|gb|ADG93318.1| protein of unknown function DUF224 cysteine-rich region domain protein [Arcobacter nitrofigilis DSM 7299] Length = 432 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 6/98 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +CV C C C + N D P + RDE + ++ Sbjct: 6 KFDYTSISDDCVKCGKCKPVCTIFNINQDEATSPRGFIDL--LGAYERDELELDK----N 59 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC + CP L I +++ + + Sbjct: 60 AKDIFESCFLCTNCVEVCPNDLPTDMIIEQVRSDIAKK 97 >gi|313117266|ref|YP_004044249.1| FAD/FMN-dependent dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312294157|gb|ADQ68588.1| FAD/FMN-dependent dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 1010 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 61/220 (27%), Gaps = 22/220 (10%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM-KDIKGA 110 L+ ++ + I + + + G G + + + Sbjct: 474 LNLKSESGVEDMHSITDDVTDLVLEHHGSFSGEHGDGMARTEFNPKMYGETLWDAFKRVK 533 Query: 111 IAVYPL----PHMSVIKDLVVDMSHFYSQ-----HRSIEPWLKTVSPKPAKELLQSHEDR 161 A P P V + D+ + R + + L ++ Sbjct: 534 TAFDPEWWMHPGNVVYRSGADDIGPDSDRGVGADMREHLRYGAQYQSIEPQTTLDFTDEG 593 Query: 162 QKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLI--DSR-DEFQGE 213 + C C C + CP+Y + + R I D R DE E Sbjct: 594 GFSQLVELCNGCGTCRQTGQEVMCPTYRASREEVQTTRGRANLLRSAISGDLRPDEIHSE 653 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L C C CP G++ AK A++K Sbjct: 654 RFQ----EEVLDLCIGCKGCKSDCPTGVDMAKLKAEVKHQ 689 >gi|229489224|ref|ZP_04383090.1| iron-sulfur cluster-binding protein [Rhodococcus erythropolis SK121] gi|229324728|gb|EEN90483.1| iron-sulfur cluster-binding protein [Rhodococcus erythropolis SK121] Length = 506 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 28/182 (15%) Query: 93 DGTNTLACVKDMKDIKGAIAVYPL-PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L K + + G + P + V L+ S + W Sbjct: 245 NGRMCLTLPKTLITVMGIEKILPTYQDLEVFLQLLPRSSTGERMNPYTSMWTGVTPDDGP 304 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 +E D + L + C+ C+ C CP Y Y GP + Sbjct: 305 QEFHLVLLDNGRTAALADKIGREALSCIRCSACLNVCPVYERTGGHAYGSTYPGPIGAVL 364 Query: 199 AYRWL-IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + +D DP + C +CP ++ + +++ + Sbjct: 365 TPQLAGMHGKD-----------DPNSTLPFASSLCGACFDACPVKIDIPSLLVELRHQKV 413 Query: 256 DR 257 ++ Sbjct: 414 EQ 415 >gi|52548598|gb|AAU82447.1| hypothetical protein GZ17F1_18 [uncultured archaeon GZfos17F1] Length = 933 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 22/231 (9%) Query: 34 RWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNID 93 ++ D K + +D V + + P++ D + + + + +N++ Sbjct: 401 NYDEDMKPDAFIDDVAVSVPDLAPLICDMHEIFEEYGITSAVYGHAGSGNLHIRPMLNLN 460 Query: 94 GT------NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH------FYSQHRSIEP 141 T L K + M ++ + ++ + Q + I Sbjct: 461 DTRNIDLMPELVDRVYDVVFKYGGTMTGEHGMGRLRTMFLEKEWGRGIYGYMQQIKEIFD 520 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE-----CVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++P Q +D + C+ C C + CP G Sbjct: 521 PDGILNPDVIFSDRQITDDIKYPTEYINKFEKKCINCGYCKSVCPISITLKGE-SGSRSF 579 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 LQ R+ R L C + C CP + + + Sbjct: 580 LQLARFRKLESPGHSESRSAGKM----LNTCLGCLRCATRCPSHASIGELL 626 >gi|126464494|ref|YP_001045607.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126106305|gb|ABN78835.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 469 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 30/119 (25%), Gaps = 9/119 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L FY + + C +CP Sbjct: 158 LTGGAWVFYFADAPTLLHGLVTLTAHPVAWITILVLTATTFVFAGFMREQICIYACPWPR 217 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + I + AYR D R E +G+R C M C CP G++ Sbjct: 218 IQAALMDEETITV-AYR---DWRGEPRGKR-----GETGRGDCIDCMACVNVCPMGIDI 267 >gi|296155905|ref|ZP_06838744.1| protein of unknown function DUF162 [Burkholderia sp. Ch1-1] gi|295893411|gb|EFG73190.1| protein of unknown function DUF162 [Burkholderia sp. Ch1-1] Length = 464 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 46/154 (29%), Gaps = 13/154 (8%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K + + L ++ + SHF + + E V + Sbjct: 244 IPKVSDLGVFIRMLSRSALGSPITQYTSHFRAPRKGTEMHFILVD-----HGRSERLAME 298 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C +CP Y + G + F +R L Sbjct: 299 DFWYSLKCIRCGACMNTCPVYRRSGGLSYGGTYSGPIGAIIN---PTFDLKRYSALP--- 352 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +CT CP +N + I K + ++ + Sbjct: 353 --FASTLNGSCTNVCPVKINIHEQIYKWRTVIAE 384 >gi|270261662|ref|ZP_06189935.1| transporter [Serratia odorifera 4Rx13] gi|270045146|gb|EFA18237.1| transporter [Serratia odorifera 4Rx13] Length = 801 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 24/86 (27%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C +CP+ Y SR E + + Sbjct: 367 EMAPQEPEQSCIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN--- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + + Sbjct: 411 --HNLFDCIECGACAFVCPSNIPLVQ 434 >gi|229114841|ref|ZP_04244254.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock1-3] gi|228668533|gb|EEL23962.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock1-3] Length = 471 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 308 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 359 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 360 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 389 >gi|297184237|gb|ADI20355.1| uncharacterized anaerobic dehydrogenase [uncultured alpha proteobacterium EB080_L27A02] Length = 919 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 32/177 (18%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM-----SVIKDLVVDMSHFYSQ 135 +G C +C + IDG TLA + + V H ++ +L+V + Sbjct: 46 SDGNCRACMVEIDGERTLAASCI-RTPTPDMVVKTESHRAKSARKMVMELLVTDQPSNEK 104 Query: 136 ----------HRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSY 183 +E ++ P+ E + +D L C+ C C +C Sbjct: 105 AHDKSSHLWDMAKLEDVSESRFPELEIERIPLLDDSHVAMNVNLDACIQCNLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + + D ++DP C C Q+CP G Sbjct: 165 QVND--VIGLAGRGHDAKIVFD------------MDDPMGESSCVACGECVQACPTG 207 >gi|294669592|ref|ZP_06734659.1| hypothetical protein NEIELOOT_01493 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308505|gb|EFE49748.1| hypothetical protein NEIELOOT_01493 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 1284 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + D L D Sbjct: 819 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSLKHFDELNDV 878 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ I+ +L Sbjct: 879 --ADHCTVCHRCVKPCPVNIDFGDVTVAIRNLLRKAG 913 >gi|157370479|ref|YP_001478468.1| RnfABCDGE type electron transport complex subunit C [Serratia proteamaculans 568] gi|166991048|sp|A8GE00|RNFC_SERP5 RecName: Full=Electron transport complex protein rnfC gi|157322243|gb|ABV41340.1| electron transport complex, RnfABCDGE type, C subunit [Serratia proteamaculans 568] Length = 703 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 24/86 (27%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C +CP+ Y SR E + + Sbjct: 367 EMAPQEQEQSCIRCGLCVDACPAGLLPQQLYWF-------------SRGEEHEKARN--- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + + Sbjct: 411 --HNLFDCIECGACAFVCPSNIPLVQ 434 >gi|120435984|ref|YP_861670.1| FAD-linked oxidase-like protein [Gramella forsetii KT0803] gi|117578134|emb|CAL66603.1| FAD-linked oxidase-like protein [Gramella forsetii KT0803] Length = 977 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 9/109 (8%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + + ++ E + +C C T CPSY D Sbjct: 537 RYTPDRTEPEIETIMDFSEAGGVLRLAEQCNGSGDCRKSVEAGGTMCPSYRATKDEKDTT 596 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 A R + + D + R D+ E L C + C CP ++ Sbjct: 597 RARANALREFLTNSD--KKNRFDHPELKEVLDLCISCKGCKSECPSNVD 643 >gi|91201028|emb|CAJ74086.1| similar to Na(+)-translocating NADH-quinone reductase subunit A [Candidatus Kuenenia stuttgartiensis] Length = 348 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 20/135 (14%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 PL M V D + + + K + L CV C Sbjct: 225 PLRGMEVN-DFAQKIGWTVNDIVVLAAQDKKEMFPMINTDRLHF-TTNLLGELRACVYCN 282 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C CP L PA+ QAY +R E Q R + + +C C+ Sbjct: 283 FCDDICPVN-------LEPALYHQAY-----NRGEKQKVR------SYDIEKCIECGLCS 324 Query: 235 QSCPKGLNPAKAIAK 249 +CP + + I + Sbjct: 325 FACPSKIELLRIIKE 339 >gi|317047961|ref|YP_004115609.1| electron transport complex, RnfABCDGE type subunit C [Pantoea sp. At-9b] gi|316949578|gb|ADU69053.1| electron transport complex, RnfABCDGE type, C subunit [Pantoea sp. At-9b] Length = 758 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y W D + + C Sbjct: 378 CIRCSACADACPAKLLPQQLY-----------WYSQGGDHDKAR-------AHHIDDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 420 CGACAYVCPSNIPLVQ 435 >gi|221369007|ref|YP_002520103.1| Protein rdxA [Rhodobacter sphaeroides KD131] gi|221162059|gb|ACM03030.1| Protein rdxA [Rhodobacter sphaeroides KD131] Length = 502 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 30/119 (25%), Gaps = 9/119 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L FY + + C +CP Sbjct: 191 LTGGAWVFYFADAPTLLHGLVTLTAHPVAWITILVLTATTFVFAGFMREQICIYACPWPR 250 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + I + AYR D R E +G+R C M C CP G++ Sbjct: 251 IQAALMDEETITV-AYR---DWRGEPRGKR-----SETGRGDCIDCMACVNVCPMGIDI 300 >gi|53802977|ref|YP_115288.1| electron transport complex protein RnfC [Methylococcus capsulatus str. Bath] gi|53756738|gb|AAU91029.1| electron transport complex, C subunit [Methylococcus capsulatus str. Bath] Length = 523 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 25/99 (25%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ CP Y R++ Sbjct: 361 ETTGPKQALPCIRCGACAEVCPINLLPQQLYWYSRADNL--------------RRVE--- 403 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + C C CP + + K L+ ++ Sbjct: 404 -EYHVTDCIECGCCDYVCPSHIPLVQYFRAAKSELVAKQ 441 >gi|329123232|ref|ZP_08251800.1| electron transport complex protein RnfC [Haemophilus aegyptius ATCC 11116] gi|327471441|gb|EGF16889.1| electron transport complex protein RnfC [Haemophilus aegyptius ATCC 11116] Length = 707 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|319896878|ref|YP_004135073.1| NADH:ubiquinone oxidoreductase, subunit rnfc [Haemophilus influenzae F3031] gi|317432382|emb|CBY80737.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Haemophilus influenzae F3031] Length = 650 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|301170440|emb|CBW30047.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Haemophilus influenzae 10810] Length = 706 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|260581278|ref|ZP_05849096.1| electron transport complex protein rnfC [Haemophilus influenzae RdAW] gi|260092105|gb|EEW76050.1| electron transport complex protein rnfC [Haemophilus influenzae RdAW] Length = 807 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|148827108|ref|YP_001291861.1| electron transport complex protein RnfC [Haemophilus influenzae PittGG] gi|148718350|gb|ABQ99477.1| electron transport complex protein RnfC [Haemophilus influenzae PittGG] Length = 683 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 354 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 395 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 396 CGICAYVCPSHIPL---IQYFRQE--KAKI 420 >gi|145641063|ref|ZP_01796644.1| electron transport complex protein RnfC [Haemophilus influenzae R3021] gi|145274224|gb|EDK14089.1| electron transport complex protein RnfC [Haemophilus influenzae 22.4-21] Length = 763 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|145639159|ref|ZP_01794766.1| electron transport complex protein RnfC [Haemophilus influenzae PittII] gi|145271721|gb|EDK11631.1| electron transport complex protein RnfC [Haemophilus influenzae PittII] Length = 651 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|145635459|ref|ZP_01791160.1| electron transport complex protein RnfC [Haemophilus influenzae PittAA] gi|145267333|gb|EDK07336.1| electron transport complex protein RnfC [Haemophilus influenzae PittAA] Length = 868 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|145633619|ref|ZP_01789346.1| electron transport complex protein RnfC [Haemophilus influenzae 3655] gi|144985496|gb|EDJ92312.1| electron transport complex protein RnfC [Haemophilus influenzae 3655] Length = 707 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|68250289|ref|YP_249401.1| electron transport complex protein RnfC [Haemophilus influenzae 86-028NP] gi|81335290|sp|Q4QJQ6|RNFC_HAEI8 RecName: Full=Electron transport complex protein rnfC gi|68058488|gb|AAX88741.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Haemophilus influenzae 86-028NP] Length = 665 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|16273572|ref|NP_439827.1| electron transport complex protein RnfC [Haemophilus influenzae Rd KW20] gi|17368309|sp|P71397|RNFC_HAEIN RecName: Full=Electron transport complex protein rnfC gi|1574537|gb|AAC23331.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 819 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|145629223|ref|ZP_01785022.1| electron transport complex protein RnfC [Haemophilus influenzae 22.1-21] gi|144978726|gb|EDJ88449.1| electron transport complex protein RnfC [Haemophilus influenzae 22.1-21] gi|309750739|gb|ADO80723.1| Electron transport complex protein RnfC [Haemophilus influenzae R2866] Length = 763 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|148825771|ref|YP_001290524.1| electron transport complex protein RnfC [Haemophilus influenzae PittEE] gi|229845220|ref|ZP_04465353.1| electron transport complex protein RnfC [Haemophilus influenzae 6P18H1] gi|229847306|ref|ZP_04467408.1| electron transport complex protein RnfC [Haemophilus influenzae 7P49H1] gi|166225092|sp|A5UBJ0|RNFC_HAEIE RecName: Full=Electron transport complex protein rnfC gi|148715931|gb|ABQ98141.1| electron transport complex protein RnfC [Haemophilus influenzae PittEE] gi|229809731|gb|EEP45455.1| electron transport complex protein RnfC [Haemophilus influenzae 7P49H1] gi|229811815|gb|EEP47511.1| electron transport complex protein RnfC [Haemophilus influenzae 6P18H1] gi|309972919|gb|ADO96120.1| Electron transport complex protein RnfC [Haemophilus influenzae R2846] Length = 651 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|319776069|ref|YP_004138557.1| NADH:ubiquinone oxidoreductase subunit RnfC [Haemophilus influenzae F3047] gi|317450660|emb|CBY86880.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Haemophilus influenzae F3047] Length = 651 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|258514992|ref|YP_003191214.1| hypothetical protein Dtox_1734 [Desulfotomaculum acetoxidans DSM 771] gi|257778697|gb|ACV62591.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 385 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 13/89 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C+ C C +CP S+ + + + + + E L+ Sbjct: 24 EITLCMQCGVCVATCPWKRVGSEFTIREMLYMGRMGF-------------EGYESDDVLF 70 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C T +C CP+G++ + ++ M+ Sbjct: 71 ACTTCKHCAVRCPRGIDIFNVVRVMRSMI 99 >gi|218902510|ref|YP_002450344.1| iron-sulfur cluster-binding protein [Bacillus cereus AH820] gi|228926433|ref|ZP_04089505.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|259495055|sp|B7JF01|LUTB_BACC0 RecName: Full=Lactate utilization protein B gi|218534846|gb|ACK87244.1| iron-sulfur cluster-binding protein [Bacillus cereus AH820] gi|228833257|gb|EEM78822.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 473 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYNDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|57505810|ref|ZP_00371735.1| NADH-ubiquinone oxidoreductase, NQO3 subunit (NQO3) [Campylobacter upsaliensis RM3195] gi|57015840|gb|EAL52629.1| NADH-ubiquinone oxidoreductase, NQO3 subunit (NQO3) [Campylobacter upsaliensis RM3195] Length = 819 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 55/239 (23%), Gaps = 46/239 (19%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKD-- 106 V+ + + + + P + C C C + DG +C KD Sbjct: 8 VEREFSDGETILNIARRNDIFIPAICYLSGCSATLACRMCMVEADGKKVYSCNTKAKDGM 67 Query: 107 -------IKGAIAVYPLPHMSVIKDLVVDMSHFYS----QHRSIEPWLKTVSPKPAKELL 155 + + L + Q+ + + + Sbjct: 68 VVESDLGSLWEERNEIMQAYCINHPLQCGVCDKSGECELQNFTHKARVNIQKHWIQDTHK 127 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 E C++C C T C S P + D E + Sbjct: 128 PHKEWGFINYDPALCIVCERCVTVCKDKIGESALKTTPRGGVAV--------DATFKESM 179 Query: 216 DNLEDPFRLYR----------------CHTIMNCTQSCPKG------LNPAKAIAKIKM 252 D + ++ C CT CP G I ++K Sbjct: 180 GK--DAYAIWTKFQKSLIAPATGDKLECSNCGECTSVCPTGALIGAKFQYTSNIWELKR 236 >gi|324325420|gb|ADY20680.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 473 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229084391|ref|ZP_04216671.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-44] gi|228698931|gb|EEL51636.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-44] Length = 473 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|46204485|ref|ZP_00049921.2| COG1139: Uncharacterized conserved protein containing a ferredoxin-like domain [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + ++ +C+ C C +CP Y + G Sbjct: 117 YTSHFRGPRAGTEMHMVLVDNGRSERLAMEEFWTSLKCIRCGACMNTCPVYRRSGGLSYG 176 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +ID F + L + +CT CP +N + I + Sbjct: 177 ATYSGPI-GLIIDP--TFNKRKYSTLP-----FSSTMNGSCTNVCPVKINIHEQIFAWRK 228 Query: 253 MLLDR 257 +L + Sbjct: 229 VLAEE 233 >gi|228957673|ref|ZP_04119420.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802015|gb|EEM48885.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pakistani str. T13001] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229029073|ref|ZP_04185172.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1271] gi|228732353|gb|EEL83236.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1271] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229095889|ref|ZP_04226867.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-29] gi|229102002|ref|ZP_04232715.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-28] gi|228681389|gb|EEL35553.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-28] gi|228687513|gb|EEL41413.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-29] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|206967647|ref|ZP_03228603.1| iron-sulfur cluster-binding protein [Bacillus cereus AH1134] gi|228951783|ref|ZP_04113882.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229177810|ref|ZP_04305183.1| Uncharacterized electron transport protein ykgF [Bacillus cereus 172560W] gi|206736567|gb|EDZ53714.1| iron-sulfur cluster-binding protein [Bacillus cereus AH1134] gi|228605601|gb|EEK63049.1| Uncharacterized electron transport protein ykgF [Bacillus cereus 172560W] gi|228807905|gb|EEM54425.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|30019455|ref|NP_831086.1| iron-sulfur cluster-binding protein [Bacillus cereus ATCC 14579] gi|75759995|ref|ZP_00740062.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218232744|ref|YP_002366086.1| iron-sulfur cluster-binding protein [Bacillus cereus B4264] gi|218896335|ref|YP_002444746.1| iron-sulfur cluster-binding protein [Bacillus cereus G9842] gi|228907034|ref|ZP_04070898.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis IBL 200] gi|228938518|ref|ZP_04101126.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971397|ref|ZP_04132023.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978010|ref|ZP_04138389.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis Bt407] gi|229043142|ref|ZP_04190867.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH676] gi|229068953|ref|ZP_04202247.1| Uncharacterized electron transport protein ykgF [Bacillus cereus F65185] gi|229078587|ref|ZP_04211145.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock4-2] gi|229108858|ref|ZP_04238463.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock1-15] gi|229126718|ref|ZP_04255730.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-Cer4] gi|229189485|ref|ZP_04316501.1| Uncharacterized electron transport protein ykgF [Bacillus cereus ATCC 10876] gi|296501984|ref|YP_003663684.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis BMB171] gi|81580737|sp|Q81GA4|LUTB_BACCR RecName: Full=Lactate utilization protein B gi|259495056|sp|B7IMD4|LUTB_BACC2 RecName: Full=Lactate utilization protein B gi|259495058|sp|B7HH59|LUTB_BACC4 RecName: Full=Lactate utilization protein B gi|29894999|gb|AAP08287.1| iron-sulfur cluster-binding protein [Bacillus cereus ATCC 14579] gi|74492514|gb|EAO55663.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218160701|gb|ACK60693.1| iron-sulfur cluster-binding protein [Bacillus cereus B4264] gi|218540670|gb|ACK93064.1| iron-sulfur cluster-binding protein [Bacillus cereus G9842] gi|228593930|gb|EEK51733.1| Uncharacterized electron transport protein ykgF [Bacillus cereus ATCC 10876] gi|228656658|gb|EEL12484.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-Cer4] gi|228674627|gb|EEL29866.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock1-15] gi|228704731|gb|EEL57159.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock4-2] gi|228714237|gb|EEL66118.1| Uncharacterized electron transport protein ykgF [Bacillus cereus F65185] gi|228726201|gb|EEL77433.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH676] gi|228781671|gb|EEM29870.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis Bt407] gi|228788264|gb|EEM36217.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821116|gb|EEM67133.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228852538|gb|EEM97328.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis IBL 200] gi|296323036|gb|ADH05964.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis BMB171] gi|326939027|gb|AEA14923.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|325110490|ref|YP_004271558.1| D-lactate dehydrogenase [Planctomyces brasiliensis DSM 5305] gi|324970758|gb|ADY61536.1| D-lactate dehydrogenase (cytochrome) [Planctomyces brasiliensis DSM 5305] Length = 1014 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 10/102 (9%) Query: 160 DRQKIDGLYECVMCACCSTS------CPSYWWNSDRYLGPAILLQAYRWLIDSR----DE 209 + + EC C C + CP + Y P R + + DE Sbjct: 561 NAELAQAARECNGCGNCKSHAADLRMCPFHRVEPTEYNSPRAKANTIRQTLWEKITAVDE 620 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +L P L C C + CP +N + K Sbjct: 621 ESAPSVTDLSAPEMLNSCFNCKQCQRECPSEVNIPHLWLEAK 662 >gi|301052941|ref|YP_003791152.1| iron-sulfur cluster-binding protein [Bacillus anthracis CI] gi|300375110|gb|ADK04014.1| iron-sulfur cluster-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|228920115|ref|ZP_04083464.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839571|gb|EEM84863.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229154970|ref|ZP_04283084.1| Uncharacterized electron transport protein ykgF [Bacillus cereus ATCC 4342] gi|228628528|gb|EEK85241.1| Uncharacterized electron transport protein ykgF [Bacillus cereus ATCC 4342] Length = 471 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 308 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 359 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 360 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 389 >gi|229172042|ref|ZP_04299607.1| Uncharacterized electron transport protein ykgF [Bacillus cereus MM3] gi|228611385|gb|EEK68642.1| Uncharacterized electron transport protein ykgF [Bacillus cereus MM3] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|188581893|ref|YP_001925338.1| hypothetical protein Mpop_2646 [Methylobacterium populi BJ001] gi|179345391|gb|ACB80803.1| protein of unknown function DUF162 [Methylobacterium populi BJ001] Length = 524 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + ++ +C+ C C +CP Y + G Sbjct: 329 YTSHFRGPRPGTEMHMVLVDNGRSERLAMEEFWTSLKCIRCGACMNTCPVYRRSGGLSYG 388 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +ID F + L + +CT CP +N + I + Sbjct: 389 ATYSGPI-GLIIDP--TFNKRKYSTLP-----FSSTMNGSCTNVCPVKINIHEQIFAWRK 440 Query: 253 MLLDR 257 +L + Sbjct: 441 VLAEE 445 >gi|126179650|ref|YP_001047615.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125862444|gb|ABN57633.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoculleus marisnigri JR1] Length = 482 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 HE+ ++ C C C+ CP+ + P L + + R Sbjct: 28 HEEDPRLRNFRLCNACGSCTPYCPARINDPGANGDPGYLARKVTAALQ------AGRRPG 81 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI----------KMMLLDRK 258 L+ L C +C CP+ ++ I + + MLLDR Sbjct: 82 LD----LADCVQCYSCETVCPRSVSIGGIINAVYETERLQPVFRRMLLDRG 128 >gi|78223292|ref|YP_385039.1| hypothetical protein Gmet_2085 [Geobacter metallireducens GS-15] gi|78194547|gb|ABB32314.1| tungsten-dependent benzoyl-CoA reductase-related protein bamD [Geobacter metallireducens GS-15] Length = 387 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 15/86 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C + CP WN R +++ + L +E ++R Sbjct: 26 LKYCYQCGLCDSVCP---WNRVRQFSMRKIVRQGTFG-----------LTEIEQED-IWR 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C T C CP+G+N +A ++ Sbjct: 71 CSTCGTCPSRCPRGVNQIEAGVAMRR 96 >gi|163939210|ref|YP_001644094.1| iron-sulfur cluster binding protein [Bacillus weihenstephanensis KBAB4] gi|259495163|sp|A9VKN1|LUTB2_BACWK RecName: Full=Lactate utilization protein B 2 gi|163861407|gb|ABY42466.1| iron-sulfur cluster binding protein [Bacillus weihenstephanensis KBAB4] Length = 473 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|315638068|ref|ZP_07893253.1| NADH-quinone oxidoreductase subunit G [Campylobacter upsaliensis JV21] gi|315481916|gb|EFU72535.1| NADH-quinone oxidoreductase subunit G [Campylobacter upsaliensis JV21] Length = 819 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 55/239 (23%), Gaps = 46/239 (19%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKD-- 106 V+ + + + + P + C C C + DG +C KD Sbjct: 8 VECEFSDGETILNIARRNDIFIPAICYLSGCSATLACRMCMVEADGKKVYSCNTKAKDGM 67 Query: 107 -------IKGAIAVYPLPHMSVIKDLVVDMSHFYS----QHRSIEPWLKTVSPKPAKELL 155 + + L + Q+ + + + Sbjct: 68 VVESDLGSLWEERNEIMQAYCINHPLQCGVCDKSGECELQNFTHKARVNIQKHWIQDTHK 127 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 E C++C C T C S P + D E + Sbjct: 128 PHKEWGFINYDPALCIVCERCVTVCKDKIGESALKTTPRGGVAV--------DATFKESM 179 Query: 216 DNLEDPFRLYR----------------CHTIMNCTQSCPKG------LNPAKAIAKIKM 252 D + ++ C CT CP G I ++K Sbjct: 180 GK--DAYAIWTKFQKSLIAPATGDKLECSNCGECTSVCPTGALIGAKFQYTSNIWELKR 236 >gi|242239349|ref|YP_002987530.1| electron transport complex, RnfABCDGE type, C subunit [Dickeya dadantii Ech703] gi|242131406|gb|ACS85708.1| electron transport complex, RnfABCDGE type, C subunit [Dickeya dadantii Ech703] Length = 673 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ Q + C+ C+ C+ +CP+ Y DE Sbjct: 359 NCILAPSRDELQPPEAEKACIRCSKCADACPAGLLPQQLYWFSRG------------DEH 406 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + R L+ C C CP + + Sbjct: 407 EKAR------QHHLFDCIECGACAYVCPSNIPLVQ 435 >gi|260582611|ref|ZP_05850400.1| electron transport complex protein RnfC [Haemophilus influenzae NT127] gi|260094283|gb|EEW78182.1| electron transport complex protein RnfC [Haemophilus influenzae NT127] Length = 645 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGICAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|258653866|ref|YP_003203022.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] gi|258557091|gb|ACV80033.1| iron-sulfur cluster binding protein [Nakamurella multipartita DSM 44233] Length = 494 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 13/93 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + G + + Sbjct: 328 HCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVL--------TPQLTGMHGHHDVNSTL 379 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y C CP ++ + +++ +D Sbjct: 380 PYASSLCGACYDVCPVKIDIPTLLVELRGRAVD 412 >gi|229016648|ref|ZP_04173585.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1273] gi|229022863|ref|ZP_04179383.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1272] gi|228738398|gb|EEL88874.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1272] gi|228744638|gb|EEL94703.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH1273] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229144007|ref|ZP_04272423.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST24] gi|228639404|gb|EEK95818.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST24] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|229010692|ref|ZP_04167890.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides DSM 2048] gi|229132197|ref|ZP_04261054.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST196] gi|229166236|ref|ZP_04293995.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH621] gi|228617181|gb|EEK74247.1| Uncharacterized electron transport protein ykgF [Bacillus cereus AH621] gi|228651245|gb|EEL07223.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST196] gi|228750586|gb|EEM00414.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides DSM 2048] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|188996779|ref|YP_001931030.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931846|gb|ACD66476.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 418 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + I+ ++CV C+ C CP+Y + P L ++D E Sbjct: 6 EPKLTIELAHQCVKCSACRQVCPTYSVVKEERSSPRGRLALAEAVVDGILPLTEEVAAQW 65 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C CP + + + + + M ++ Sbjct: 66 NQ------CAMCRRCEWICPNEVEYKEIMFRARNMAKEK 98 >gi|30261405|ref|NP_843782.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Ames] gi|42780491|ref|NP_977738.1| iron-sulfur cluster-binding protein [Bacillus cereus ATCC 10987] gi|47526581|ref|YP_017930.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184235|ref|YP_027487.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Sterne] gi|49479780|ref|YP_035530.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52144032|ref|YP_082796.1| iron-sulfur cluster-binding protein [Bacillus cereus E33L] gi|65318670|ref|ZP_00391629.1| COG1139: Uncharacterized conserved protein containing a ferredoxin-like domain [Bacillus anthracis str. A2012] gi|118476877|ref|YP_894028.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis str. Al Hakam] gi|165870352|ref|ZP_02215007.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0488] gi|167634390|ref|ZP_02392711.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0442] gi|167639387|ref|ZP_02397659.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0193] gi|170686809|ref|ZP_02878029.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0465] gi|170706247|ref|ZP_02896708.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0389] gi|177651588|ref|ZP_02934377.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0174] gi|190568708|ref|ZP_03021612.1| iron-sulfur cluster-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035266|ref|ZP_03102671.1| iron-sulfur cluster-binding protein [Bacillus cereus W] gi|196040667|ref|ZP_03107966.1| iron-sulfur cluster-binding protein [Bacillus cereus NVH0597-99] gi|196046509|ref|ZP_03113734.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB108] gi|206977519|ref|ZP_03238413.1| iron-sulfur cluster-binding protein [Bacillus cereus H3081.97] gi|217958878|ref|YP_002337426.1| iron-sulfur cluster-binding protein [Bacillus cereus AH187] gi|222095037|ref|YP_002529097.1| iron-sulfur cluster-binding protein [Bacillus cereus Q1] gi|225863265|ref|YP_002748643.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB102] gi|227815856|ref|YP_002815865.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CDC 684] gi|228913972|ref|ZP_04077596.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228945001|ref|ZP_04107362.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090356|ref|ZP_04221599.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-42] gi|229120942|ref|ZP_04250184.1| Uncharacterized electron transport protein ykgF [Bacillus cereus 95/8201] gi|229138089|ref|ZP_04266687.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST26] gi|229183595|ref|ZP_04310818.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BGSC 6E1] gi|229195599|ref|ZP_04322365.1| Uncharacterized electron transport protein ykgF [Bacillus cereus m1293] gi|229600422|ref|YP_002865821.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0248] gi|254682537|ref|ZP_05146398.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254726199|ref|ZP_05187981.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A1055] gi|254733955|ref|ZP_05191669.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254740357|ref|ZP_05198048.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Kruger B] gi|254753745|ref|ZP_05205780.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Vollum] gi|254758841|ref|ZP_05210868.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Australia 94] gi|81569853|sp|Q73BK1|LUTB_BACC1 RecName: Full=Lactate utilization protein B gi|81613899|sp|Q6HLP1|LUTB_BACHK RecName: Full=Lactate utilization protein B gi|81688879|sp|Q63E66|LUTB_BACCZ RecName: Full=Lactate utilization protein B gi|81715349|sp|Q81TG1|LUTB_BACAN RecName: Full=Lactate utilization protein B gi|259495052|sp|C3P4C4|LUTB_BACAA RecName: Full=Lactate utilization protein B gi|259495053|sp|C3LAQ3|LUTB_BACAC RecName: Full=Lactate utilization protein B gi|259495054|sp|A0RBC8|LUTB_BACAH RecName: Full=Lactate utilization protein B gi|259495057|sp|C1EM11|LUTB_BACC3 RecName: Full=Lactate utilization protein B gi|259495059|sp|B7I0L0|LUTB_BACC7 RecName: Full=Lactate utilization protein B gi|259495061|sp|B9IUP4|LUTB_BACCQ RecName: Full=Lactate utilization protein B gi|30255259|gb|AAP25268.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Ames] gi|42736410|gb|AAS40346.1| iron-sulfur cluster-binding protein [Bacillus cereus ATCC 10987] gi|47501729|gb|AAT30405.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178162|gb|AAT53538.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. Sterne] gi|49331336|gb|AAT61982.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977501|gb|AAU19051.1| iron-sulfur cluster-binding protein [Bacillus cereus E33L] gi|118416102|gb|ABK84521.1| iron-sulfur cluster-binding protein [Bacillus thuringiensis str. Al Hakam] gi|164713847|gb|EDR19369.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0488] gi|167512826|gb|EDR88200.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0193] gi|167530278|gb|EDR93004.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0442] gi|170128781|gb|EDS97647.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0389] gi|170669332|gb|EDT20075.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0465] gi|172082866|gb|EDT67929.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0174] gi|190560124|gb|EDV14105.1| iron-sulfur cluster-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195991943|gb|EDX55906.1| iron-sulfur cluster-binding protein [Bacillus cereus W] gi|196022693|gb|EDX61375.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB108] gi|196028457|gb|EDX67065.1| iron-sulfur cluster-binding protein [Bacillus cereus NVH0597-99] gi|206744237|gb|EDZ55650.1| iron-sulfur cluster-binding protein [Bacillus cereus H3081.97] gi|217065591|gb|ACJ79841.1| iron-sulfur cluster-binding protein [Bacillus cereus AH187] gi|221239095|gb|ACM11805.1| iron-sulfur cluster-binding protein [Bacillus cereus Q1] gi|225789863|gb|ACO30080.1| iron-sulfur cluster-binding protein [Bacillus cereus 03BB102] gi|227006339|gb|ACP16082.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. CDC 684] gi|228587848|gb|EEK45900.1| Uncharacterized electron transport protein ykgF [Bacillus cereus m1293] gi|228599838|gb|EEK57435.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BGSC 6E1] gi|228645434|gb|EEL01668.1| Uncharacterized electron transport protein ykgF [Bacillus cereus BDRD-ST26] gi|228662602|gb|EEL18200.1| Uncharacterized electron transport protein ykgF [Bacillus cereus 95/8201] gi|228692939|gb|EEL46657.1| Uncharacterized electron transport protein ykgF [Bacillus cereus Rock3-42] gi|228814670|gb|EEM60930.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228845694|gb|EEM90721.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229264830|gb|ACQ46467.1| iron-sulfur cluster-binding protein [Bacillus anthracis str. A0248] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|309379720|emb|CBX21709.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 498 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|59801402|ref|YP_208114.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|254493531|ref|ZP_05106702.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|260440774|ref|ZP_05794590.1| putative ferredoxin [Neisseria gonorrhoeae DGI2] gi|268594590|ref|ZP_06128757.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268597084|ref|ZP_06131251.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268598737|ref|ZP_06132904.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268601095|ref|ZP_06135262.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268603414|ref|ZP_06137581.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268681894|ref|ZP_06148756.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268684110|ref|ZP_06150972.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268686364|ref|ZP_06153226.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|59718297|gb|AAW89702.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|226512571|gb|EEH61916.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|268547979|gb|EEZ43397.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268550872|gb|EEZ45891.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268582868|gb|EEZ47544.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268585226|gb|EEZ49902.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268587545|gb|EEZ52221.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268622178|gb|EEZ54578.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268624394|gb|EEZ56794.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268626648|gb|EEZ59048.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] Length = 498 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|281492325|ref|YP_003354305.1| Fe-S cluster-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281375989|gb|ADA65480.1| Fe-S cluster-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 490 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 19/92 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + L E Sbjct: 313 QCIRCGACLNVCPVYRQIGGHAYGSIYPGPIGSVL-------------SPVLGGYEQYGD 359 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Y CT++CP + + + + + ++ Sbjct: 360 LPYASTLCGACTETCPVKIPLHELLIEHRKVM 391 >gi|78356886|ref|YP_388335.1| Iron-sulfur cluster binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219291|gb|ABB38640.1| Iron-sulfur cluster binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 480 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 13/86 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL---IDSRDEFQGERLDNLEDPFRLY 225 +C+ C C CP Y G + L ID D L L Sbjct: 312 QCIRCGTCLNHCPVYTRIGGHAYGSVYPGPIGKILTPQIDGLDLKGS-----LATASSL- 365 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C + CP + I +++ Sbjct: 366 ----CNACQEVCPVMIPIPAIIRRMR 387 >gi|15673716|ref|NP_267890.1| iron-binding oxidase subunit [Lactococcus lactis subsp. lactis Il1403] gi|12724753|gb|AAK05832.1|AE006403_10 iron-binding oxidase subunit [Lactococcus lactis subsp. lactis Il1403] gi|326407200|gb|ADZ64271.1| iron-binding oxidase subunit [Lactococcus lactis subsp. lactis CV56] Length = 490 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 19/92 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + L E Sbjct: 313 QCIRCGACLNVCPVYRQIGGHAYGSIYPGPIGSVL-------------SPVLGGYEQYGD 359 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Y CT++CP + + + + + ++ Sbjct: 360 LPYASTLCGACTETCPVKIPLHELLIEHRKVM 391 >gi|294141108|ref|YP_003557086.1| electron transport complex protein rnfC [Shewanella violacea DSS12] gi|293327577|dbj|BAJ02308.1| electron transport complex protein rnfC [Shewanella violacea DSS12] Length = 914 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 35/115 (30%), Gaps = 22/115 (19%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 LL + ++ CV C C+ CP+ L Q Y Sbjct: 362 KGSNCVLLPASDELAPEQKEIPCVRCGECAQVCPAQLLPQQ--LFWHAKAQEY------- 412 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 D+ F L C CT CP + + IAK IK ++K Sbjct: 413 DKAT---------SFNLADCIECGCCTYVCPSEIPLVEYYRIAKSAIKAEAEEKK 458 >gi|261377446|ref|ZP_05982019.1| cytochrome c oxidase accessory protein CcoG [Neisseria cinerea ATCC 14685] gi|269146169|gb|EEZ72587.1| cytochrome c oxidase accessory protein CcoG [Neisseria cinerea ATCC 14685] Length = 498 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE---RGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|253699219|ref|YP_003020408.1| hypothetical protein GM21_0576 [Geobacter sp. M21] gi|251774069|gb|ACT16650.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 426 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + +CV C C CP++ + + L + Sbjct: 15 EMKKCVKCGACRAHCPAFSTFQREPATARGKVALAQHLCKGDITLDDGTYSAMS------ 68 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C CP + + + + L R+ Sbjct: 69 KCLLCGSCVDKCPNQVPTDEIVIAAREALAQRR 101 >gi|167584833|ref|ZP_02377221.1| Iron-sulfur cluster binding protein [Burkholderia ubonensis Bu] Length = 481 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 21/96 (21%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L + D Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLNATADLPTAS-------- 368 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + CP + + + +++ + Sbjct: 369 ------TLCGACGEVCPVRIPIPQLLVRLRTEANRK 398 >gi|47566189|ref|ZP_00237217.1| iron-sulfur cluster binding protein [Bacillus cereus G9241] gi|228984477|ref|ZP_04144654.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47556742|gb|EAL15073.1| iron-sulfur cluster binding protein [Bacillus cereus G9241] gi|228775180|gb|EEM23569.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|319441528|ref|ZP_07990684.1| iron-sulfur cluster binding protein [Corynebacterium variabile DSM 44702] Length = 508 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 11/95 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNL 218 Q C+ C+ C CP Y G P + L+ DE L Sbjct: 329 QHGRDALRCIRCSACMNVCPVYEHAGGHAYGSVYPGPIGAILTPLLTGVDESANGSLP-- 386 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 Y C +CP +N + + +++ Sbjct: 387 ------YASSLCGACFDACPVKINIPEMLTRLRNE 415 >gi|301058319|ref|ZP_07199352.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300447555|gb|EFK11287.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 527 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P + T + KP + ++ + + ++ C C CS++CP + P A Sbjct: 130 SPVVPTQAQKPGTDPREALQRLAALHDVFACQDCGKCSSACPLTLV--GKPFSPRATANA 187 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 S Q + ++ C T C++ CP ++ ++ + ++ ++++ ++ Sbjct: 188 AIGGQISSPSVQND----------IWSCLTCGLCSERCPSAVDFSRFVRDLRDVVVENRV 237 >gi|319410701|emb|CBY91081.1| putative ferredoxin [Neisseria meningitidis WUE 2594] Length = 500 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 226 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 281 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 282 EAGLGDCINCAMCVQVCPVGIDI 304 >gi|302385582|ref|YP_003821404.1| iron-sulfur binding reductase [Clostridium saccharolyticum WM1] gi|302196210|gb|ADL03781.1| iron-sulfur binding reductase [Clostridium saccharolyticum WM1] Length = 329 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 24/100 (24%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +D+++I CV C C C D E+L+ Sbjct: 1 MKDKERIIDPDACVHCHLCRQHCLFLEKYK-------------------LDIGDKEKLEE 41 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L Y C C++ CPKG++ + I ++ + R Sbjct: 42 LS-----YHCFLCGKCSEVCPKGIDGREIILNMRKEQVKR 76 >gi|240016775|ref|ZP_04723315.1| putative ferredoxin [Neisseria gonorrhoeae FA6140] Length = 521 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 247 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 302 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 303 EAGLGDCINCAMCVQVCPVGIDI 325 >gi|222053936|ref|YP_002536298.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221563225|gb|ACM19197.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 430 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C +CP++ + + L+ E + + Sbjct: 17 EKDLKKCVKCGACRANCPAFSTFQREPAVARGKVALTQHLLAKDIELDDQTYLAMS---- 72 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C + CP + + + + L +++ Sbjct: 73 --KCLLCGSCVEKCPNEVPTDEIVIAAREALAEQR 105 >gi|327401440|ref|YP_004342279.1| hypothetical protein Arcve_1564 [Archaeoglobus veneficus SNP6] gi|327316948|gb|AEA47564.1| protein of unknown function DUF224 cysteine-rich region domain protein [Archaeoglobus veneficus SNP6] Length = 393 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 13/95 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + +C+ C C SCP G A R ++ + + +D + Sbjct: 16 EVAESEKYKQCLQCGTCGGSCP---------YGIASPFTPRRMIL----AIRAKLVDEIL 62 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + C + C+ CP + I L Sbjct: 63 ESGAHWLCTSCYTCSYRCPSQIPLTDGIIPALREL 97 Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLN----PAKAIAKIKMMLLDR 257 ERL + + + +C C SCP G+ P + I I+ L+D Sbjct: 12 ERLSEVAESEKYKQCLQCGTCGGSCPYGIASPFTPRRMILAIRAKLVDE 60 >gi|296387989|ref|ZP_06877464.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PAb1] Length = 656 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 26/105 (24%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + E L Sbjct: 359 ELPEPVPAMPCIRCGDCARVCPVSLLPQQLHFFALG----------------DEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP G+ + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSGIPLVQYYRASKAEIREQRQKLLKA 445 >gi|239998740|ref|ZP_04718664.1| putative ferredoxin [Neisseria gonorrhoeae 35/02] gi|240014341|ref|ZP_04721254.1| putative ferredoxin [Neisseria gonorrhoeae DGI18] gi|240080972|ref|ZP_04725515.1| putative ferredoxin [Neisseria gonorrhoeae FA19] gi|240112669|ref|ZP_04727159.1| putative ferredoxin [Neisseria gonorrhoeae MS11] gi|240115415|ref|ZP_04729477.1| putative ferredoxin [Neisseria gonorrhoeae PID18] gi|240117712|ref|ZP_04731774.1| putative ferredoxin [Neisseria gonorrhoeae PID1] gi|240121903|ref|ZP_04734865.1| putative ferredoxin [Neisseria gonorrhoeae PID24-1] gi|240123265|ref|ZP_04736221.1| putative ferredoxin [Neisseria gonorrhoeae PID332] gi|240125517|ref|ZP_04738403.1| putative ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|240127970|ref|ZP_04740631.1| putative ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|293399260|ref|ZP_06643425.1| cytochrome c oxidase accessory protein CcoG [Neisseria gonorrhoeae F62] gi|291610674|gb|EFF39784.1| cytochrome c oxidase accessory protein CcoG [Neisseria gonorrhoeae F62] Length = 521 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 247 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 302 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 303 EAGLGDCINCAMCVQVCPVGIDI 325 >gi|160902086|ref|YP_001567667.1| electron transport complex, RnfABCDGE type, C subunit [Petrotoga mobilis SJ95] gi|160359730|gb|ABX31344.1| electron transport complex, RnfABCDGE type, C subunit [Petrotoga mobilis SJ95] Length = 440 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ Y C+ CA C +CP L P L + R +++ Sbjct: 355 KEEIPQKHEYPCIRCASCVKACPI-------GLQPYYLKKLA-----------DARKNDI 396 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C+ CP ++ K Sbjct: 397 AQENGIMDCIECGACSYICPSNIDLVK 423 >gi|108801349|ref|YP_641546.1| Iron-sulfur cluster binding protein [Mycobacterium sp. MCS] gi|119870502|ref|YP_940454.1| iron-sulfur cluster binding protein [Mycobacterium sp. KMS] gi|126437332|ref|YP_001073023.1| iron-sulfur cluster binding protein [Mycobacterium sp. JLS] gi|108771768|gb|ABG10490.1| Iron-sulfur cluster binding protein [Mycobacterium sp. MCS] gi|119696591|gb|ABL93664.1| iron-sulfur cluster binding protein [Mycobacterium sp. KMS] gi|126237132|gb|ABO00533.1| iron-sulfur cluster binding protein [Mycobacterium sp. JLS] Length = 484 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 26/182 (14%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V L+ S + W Sbjct: 235 NGRMCLTLPQTLITVMGIEKIVPRFTDLEVFMQLLPRSSTAERMNPYTSMWTGVHPGDGP 294 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 +E D + L C+ C+ C CP Y Y GP Sbjct: 295 QEFHLVLLDNGRTSVLADEVGRAALHCIRCSACLNVCPVYERTGGHAYGSVYPGPIGA-- 352 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ + +DP Y C +CP ++ + ++ +D Sbjct: 353 ----ILSPQLTGTAGH----DDPNSSLPYASSLCGACFDACPVRIDIPSILVHLRAKQVD 404 Query: 257 RK 258 + Sbjct: 405 AQ 406 >gi|52549154|gb|AAU83003.1| acetyl-CoA decarbonylase/synthase alpha subunit [uncultured archaeon GZfos1D1] Length = 820 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 21/85 (24%), Gaps = 24/85 (28%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C C C CP+ S + L Y Sbjct: 411 KEEASRCNSCDVCVDVCPNKQTISKAMDDVSALADIY----------------------- 447 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIA 248 C C ++CP+G+ I Sbjct: 448 -DNCIFCGECERACPEGVPIMDLIM 471 >gi|289207817|ref|YP_003459883.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. K90mix] gi|288943448|gb|ADC71147.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. K90mix] Length = 230 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + L C+ C C+ +CPS + P ++Q E ++ + Sbjct: 17 DFRYDHELNGCLNCGICTATCPSAQFYD---YSPREIVQLL----------WTENVEQIY 63 Query: 220 DP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +++ C M C CP +P +A ++ + + ++ Sbjct: 64 DAMQEKIWACAQCMTCAARCPFKNSPGGLVAIMREVAIKHEM 105 >gi|307299260|ref|ZP_07579061.1| aldo/keto reductase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915056|gb|EFN45442.1| aldo/keto reductase [Thermotogales bacterium mesG1.Ag.4.2] Length = 375 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 9/136 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + V+ + M + ++ + K C C+ C Sbjct: 243 PDVGVVLSGMSTMDQVRENIETAREASPNSMSSSELAIVDRVREEYKKRIKVSCTGCSYC 302 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CPS + ++ DS ++ + L +++ R C C + Sbjct: 303 MP-CPSGVAIPTCFDF-----FNDAYMFDSIEDHKKAYLRSVKKENRASLCVECGRCEEL 356 Query: 237 CPKGLNPAKAIAKIKM 252 CP+ + I ++K Sbjct: 357 CPQNIPI---IEQLKE 369 >gi|83409912|emb|CAI64333.1| iron-sulfur binding reductase [uncultured archaeon] Length = 350 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 17/82 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP + YR ++ C T Sbjct: 11 CYQCGKCTAICPVRRVVKTSPRNTIYMNNVYR-----------------TSSDDIWNCLT 53 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 C CP+G++ + I +++ Sbjct: 54 CGLCYDGCPQGVDYPEFIKEVR 75 >gi|240139303|ref|YP_002963778.1| putative oxidoreductase, putative 4Fe-4S ferredoxin domain [Methylobacterium extorquens AM1] gi|240009275|gb|ACS40501.1| putative oxidoreductase, putative 4Fe-4S ferredoxin domain [Methylobacterium extorquens AM1] Length = 524 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + ++ +C+ C C +CP Y + G Sbjct: 329 YTSHFRGPRPGTEMHMVLVDNGRSERLAMEEFWTSLKCIRCGACMNTCPVYRRSGGLSYG 388 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +ID F + L + +CT CP +N + I + Sbjct: 389 ATYSGPI-GLIIDP--TFNKRKYSTLP-----FSSTMNGSCTNVCPVKINIHEQIFAWRK 440 Query: 253 MLLDR 257 +L + Sbjct: 441 VLAEE 445 >gi|229149604|ref|ZP_04277835.1| Uncharacterized electron transport protein ykgF [Bacillus cereus m1550] gi|228633814|gb|EEK90412.1| Uncharacterized electron transport protein ykgF [Bacillus cereus m1550] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|150026254|ref|YP_001297080.1| NADH dehydrogenase I, I subunit [Flavobacterium psychrophilum JIP02/86] gi|156633518|sp|A6H1Q5|NUOI_FLAPJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|149772795|emb|CAL44279.1| NADH dehydrogenase I, I subunit [Flavobacterium psychrophilum JIP02/86] Length = 183 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 13/143 (9%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L+ K K + L ++++K L++ + HF+ + + + + Sbjct: 10 LSGRKKQVSNKEMTFLESLYLVAIVKGLLITIKHFFR--KKVTIHYPEQVREMSPVYRGQ 67 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 H ++ G C C C+ SCP+ + YR E+ Sbjct: 68 HMLKRDEQGRENCTACGLCALSCPAEAITMKAAERKSNEKHLYR----------EEKYAE 117 Query: 218 LEDPFRLYRCHTIMNCTQSCPKG 240 + + L RC C ++CPK Sbjct: 118 IYEINML-RCIFCGLCEEACPKD 139 >gi|78776806|ref|YP_393121.1| hypothetical protein Suden_0607 [Sulfurimonas denitrificans DSM 1251] gi|78497346|gb|ABB43886.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 427 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E EC+ C C C + N+D P +D +Q Sbjct: 1 MSKSAQEIFNFGATTDECIKCGKCIPVCTIHNVNADEVTSPRGF-------LDLLGAYQR 53 Query: 213 ERLDNLEDPFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L+ ++ ++ C C + CPK L I +++ + + Sbjct: 54 GNLELDQNAKDIFESCFLCTACVEVCPKSLPTDMVIEQVRADIGKK 99 >gi|309379683|emb|CBX21672.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 1306 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|261401936|ref|ZP_05988061.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria lactamica ATCC 23970] gi|269207887|gb|EEZ74342.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria lactamica ATCC 23970] Length = 1306 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|257091968|ref|YP_003165609.1| FAD linked oxidase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044492|gb|ACV33680.1| FAD linked oxidase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1291 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R D D Sbjct: 820 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSLRHFDEFNDV 879 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ +++ +L ++ Sbjct: 880 --ADHCTICHKCVTPCPVDIDFGNVSIRMRNLLREQG 914 >gi|228964362|ref|ZP_04125477.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar sotto str. T04001] gi|228795302|gb|EEM42793.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar sotto str. T04001] Length = 473 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 310 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 361 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 362 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 391 >gi|227494390|ref|ZP_03924706.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Actinomyces coleocanis DSM 15436] gi|226832124|gb|EEH64507.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Actinomyces coleocanis DSM 15436] Length = 421 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 12/91 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP + QA R+ GE +D Sbjct: 14 RTSLDNCVKCTICETQCPVARITPKFPGPKFVGPQAERF-------RNGESVD-----HS 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C CT CP+G+ A+ A+ + ++ Sbjct: 62 LDYCSGCGICTMVCPQGVKIAEINAQARAVM 92 >gi|325206172|gb|ADZ01625.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M04-240196] Length = 1277 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|325198236|gb|ADY93692.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis G2136] Length = 1277 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|325144338|gb|EGC66641.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M01-240013] Length = 1306 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|325142310|gb|EGC64724.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis 961-5945] Length = 1274 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 809 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 868 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 869 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 901 >gi|296314229|ref|ZP_06864170.1| cytochrome c oxidase accessory protein CcoG [Neisseria polysaccharea ATCC 43768] gi|296839134|gb|EFH23072.1| cytochrome c oxidase accessory protein CcoG [Neisseria polysaccharea ATCC 43768] Length = 498 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 224 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 279 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 280 EAGLGDCINCAMCVQVCPVGIDI 302 >gi|240080840|ref|ZP_04725383.1| putative oxidoreductase [Neisseria gonorrhoeae FA19] gi|240115549|ref|ZP_04729611.1| putative oxidoreductase [Neisseria gonorrhoeae PID18] gi|240123399|ref|ZP_04736355.1| putative oxidoreductase [Neisseria gonorrhoeae PID332] gi|240125647|ref|ZP_04738533.1| putative oxidoreductase [Neisseria gonorrhoeae SK-92-679] gi|260440641|ref|ZP_05794457.1| putative oxidoreductase [Neisseria gonorrhoeae DGI2] gi|268596958|ref|ZP_06131125.1| oxidoreductase [Neisseria gonorrhoeae FA19] gi|268601221|ref|ZP_06135388.1| oxidoreductase [Neisseria gonorrhoeae PID18] gi|268682021|ref|ZP_06148883.1| oxidoreductase [Neisseria gonorrhoeae PID332] gi|268684232|ref|ZP_06151094.1| oxidoreductase [Neisseria gonorrhoeae SK-92-679] gi|291043949|ref|ZP_06569665.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293399152|ref|ZP_06643317.1| oxidoreductase [Neisseria gonorrhoeae F62] gi|268550746|gb|EEZ45765.1| oxidoreductase [Neisseria gonorrhoeae FA19] gi|268585352|gb|EEZ50028.1| oxidoreductase [Neisseria gonorrhoeae PID18] gi|268622305|gb|EEZ54705.1| oxidoreductase [Neisseria gonorrhoeae PID332] gi|268624516|gb|EEZ56916.1| oxidoreductase [Neisseria gonorrhoeae SK-92-679] gi|291012412|gb|EFE04401.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291610566|gb|EFF39676.1| oxidoreductase [Neisseria gonorrhoeae F62] Length = 1306 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|220935384|ref|YP_002514283.1| hypothetical protein Tgr7_2216 [Thioalkalivibrio sp. HL-EbGR7] gi|219996694|gb|ACL73296.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 230 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + L C+ C C+ +CPS + P ++Q E ++ + Sbjct: 17 DFRYDHELNGCLNCGICTATCPSAQFYD---YSPREIVQLL----------WTENVEQIY 63 Query: 220 DP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D +++ C M C CP +P +A ++ + + ++ Sbjct: 64 DAMQEKIWACAQCMTCAARCPFKNSPGGLVAIMREVAIKHEM 105 >gi|59801292|ref|YP_208004.1| putative oxidoreductase [Neisseria gonorrhoeae FA 1090] gi|59718187|gb|AAW89592.1| putative oxidoreductase [Neisseria gonorrhoeae FA 1090] Length = 1277 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|15603719|ref|NP_246793.1| hypothetical protein PM1854 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722281|gb|AAK03938.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 467 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP+Y G + E D C Sbjct: 311 RCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVIS-PILGGYEEFKDLPS------ACS 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C Q CP + A + K + + + Sbjct: 364 LCTACNQVCPVKIPLANLLLKHRRHIAE 391 >gi|291544451|emb|CBL17560.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus sp. 18P13] Length = 426 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + C+ C C +CP P L +AYR +RD ++L Sbjct: 346 EHYQENPETACIRCGRCMHACPMRLM-------PTELEKAYR----TRDVAALQKLK--- 391 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C +CT CP G + A+ K +L +K Sbjct: 392 ----LSLCMNCGSCTYVCPAGRHLAETNQLAKALLPRKK 426 >gi|254493656|ref|ZP_05106827.1| oxidoreductase [Neisseria gonorrhoeae 1291] gi|226512696|gb|EEH62041.1| oxidoreductase [Neisseria gonorrhoeae 1291] gi|317164159|gb|ADV07700.1| putative oxidoreductase [Neisseria gonorrhoeae TCDC-NG08107] Length = 1306 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|184200083|ref|YP_001854290.1| putative iron-sulfur protein [Kocuria rhizophila DC2201] gi|183580313|dbj|BAG28784.1| putative iron-sulfur protein [Kocuria rhizophila DC2201] Length = 663 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 5/90 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C CP Y G L E +L L Sbjct: 328 HCIRCSACLNVCPVYEHAGGHSYGSTYPGPIGAILSPQLTGITSEENASLPYASSL---- 383 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C Q CP +N + + ++ + + Sbjct: 384 -CGACYQVCPVKINIPEILVHLRDEDIRAQ 412 >gi|325138047|gb|EGC60620.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis ES14902] Length = 1277 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|325134157|gb|EGC56807.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M13399] Length = 1277 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|254804887|ref|YP_003083108.1| probable iron-sulfur binding oxidoreductase [Neisseria meningitidis alpha14] gi|254668429|emb|CBA05630.1| probable iron-sulfur binding oxidoreductase [Neisseria meningitidis alpha14] Length = 1277 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|240112793|ref|ZP_04727283.1| putative oxidoreductase [Neisseria gonorrhoeae MS11] gi|268598865|ref|ZP_06133032.1| oxidoreductase [Neisseria gonorrhoeae MS11] gi|268582996|gb|EEZ47672.1| oxidoreductase [Neisseria gonorrhoeae MS11] Length = 1306 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|261380944|ref|ZP_05985517.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria subflava NJ9703] gi|284796201|gb|EFC51548.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria subflava NJ9703] Length = 1277 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|194098477|ref|YP_002001537.1| putative oxidoreductase [Neisseria gonorrhoeae NCCP11945] gi|240014215|ref|ZP_04721128.1| putative oxidoreductase [Neisseria gonorrhoeae DGI18] gi|240016651|ref|ZP_04723191.1| putative oxidoreductase [Neisseria gonorrhoeae FA6140] gi|240117841|ref|ZP_04731903.1| putative oxidoreductase [Neisseria gonorrhoeae PID1] gi|240121778|ref|ZP_04734740.1| putative oxidoreductase [Neisseria gonorrhoeae PID24-1] gi|240128101|ref|ZP_04740762.1| putative oxidoreductase [Neisseria gonorrhoeae SK-93-1035] gi|268603543|ref|ZP_06137710.1| oxidoreductase [Neisseria gonorrhoeae PID1] gi|268686489|ref|ZP_06153351.1| oxidoreductase [Neisseria gonorrhoeae SK-93-1035] gi|193933767|gb|ACF29591.1| putative oxidoreductase [Neisseria gonorrhoeae NCCP11945] gi|268587674|gb|EEZ52350.1| oxidoreductase [Neisseria gonorrhoeae PID1] gi|268626773|gb|EEZ59173.1| oxidoreductase [Neisseria gonorrhoeae SK-93-1035] Length = 1306 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|121634802|ref|YP_975047.1| putative oxidoreductase [Neisseria meningitidis FAM18] gi|120866508|emb|CAM10256.1| putative oxidoreductase [Neisseria meningitidis FAM18] gi|325132114|gb|EGC54810.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M6190] Length = 1306 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|325268567|ref|ZP_08135197.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella multiformis DSM 16608] gi|324989095|gb|EGC21048.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella multiformis DSM 16608] Length = 417 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 12/88 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFR 223 + L +C+ C+ C+ CP Y GP S + + RL DN Sbjct: 13 NNLEQCLKCSICTAYCPVSAVEP-AYPGPK----------HSGPDLERYRLKDNRFFDEA 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ A I + Sbjct: 62 LKMCLNCKRCEVACPSGVRIADIIQASR 89 >gi|291519330|emb|CBK74551.1| electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit [Butyrivibrio fibrisolvens 16/4] Length = 760 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C +CP L P+ + ++ D+ Q E+ LE Sbjct: 356 DDVSEQETTACINCGRCVEACP-------ENLIPS---RLSKFSDHG-DKEQFEKWYGLE 404 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C+ +CP A+AI +K ++L K Sbjct: 405 -------CIECGSCSYACPAKQPLAQAIKTMKKIVLAEK 436 >gi|239905181|ref|YP_002951920.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio magneticus RS-1] gi|239795045|dbj|BAH74034.1| quinone-interacting membrane-bound oxidoreductase complex subunit C [Desulfovibrio magneticus RS-1] Length = 399 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 13/84 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C CA CS +CP P + +W + +R + D ++ CH Sbjct: 27 KCYQCATCSVACP---LAPPETPFPRKEMVWAQWGL-------KDRFEGDID---IWLCH 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKM 252 C+ CP+G P ++ I+ Sbjct: 74 NCQTCSDLCPRGARPGDLVSAIRN 97 >gi|218530790|ref|YP_002421606.1| hypothetical protein Mchl_2839 [Methylobacterium chloromethanicum CM4] gi|254561759|ref|YP_003068854.1| oxidoreductase, 4Fe-4S ferredoxin domain [Methylobacterium extorquens DM4] gi|218523093|gb|ACK83678.1| protein of unknown function DUF162 [Methylobacterium chloromethanicum CM4] gi|254269037|emb|CAX24998.1| putative oxidoreductase, putative 4Fe-4S ferredoxin domain [Methylobacterium extorquens DM4] Length = 524 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + ++ +C+ C C +CP Y + G Sbjct: 329 YTSHFRGPRPGTEMHMVLVDNGRSERLAMEEFWTSLKCIRCGACMNTCPVYRRSGGLSYG 388 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +ID F + L + +CT CP +N + I + Sbjct: 389 ATYSGPI-GLIIDP--TFNKRKYSTLP-----FSSTMNGSCTNVCPVKINIHEQIFAWRK 440 Query: 253 MLLDR 257 +L + Sbjct: 441 VLAEE 445 >gi|56418929|ref|YP_146247.1| hypothetical protein GK0394 [Geobacillus kaustophilus HTA426] gi|81558091|sp|Q5L301|LUTB_GEOKA RecName: Full=Lactate utilization protein B gi|56378771|dbj|BAD74679.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 476 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++++R Sbjct: 364 SLCAACTEACPVKIPLHELLIKHRQIIVER 393 >gi|325202215|gb|ADY97669.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M01-240149] gi|325208030|gb|ADZ03482.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis NZ-05/33] Length = 1277 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|253997322|ref|YP_003049386.1| RnfABCDGE type electron transport complex subunit C [Methylotenera mobilis JLW8] gi|253984001|gb|ACT48859.1| electron transport complex, RnfABCDGE type, C subunit [Methylotenera mobilis JLW8] Length = 637 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C+ +CP + Y D F+ R + Sbjct: 380 PPPPAQPCIRCTRCADACPVNLQPQELYWFAKS------------DNFEKAR------DY 421 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L+ C CT CP + + K ++ Sbjct: 422 KLFDCIECGCCTYVCPSNIPLVQYYRYAKSEII 454 >gi|228932684|ref|ZP_04095557.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826942|gb|EEM72703.1| Uncharacterized electron transport protein ykgF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 290 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 127 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 178 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++++ Sbjct: 179 SLCGACTEACPVKIPLHDLLLKHRQVIVEQ 208 >gi|261418722|ref|YP_003252404.1| iron-sulfur cluster binding protein [Geobacillus sp. Y412MC61] gi|319765537|ref|YP_004131038.1| iron-sulfur cluster binding protein [Geobacillus sp. Y412MC52] gi|261375179|gb|ACX77922.1| iron-sulfur cluster binding protein [Geobacillus sp. Y412MC61] gi|317110403|gb|ADU92895.1| iron-sulfur cluster binding protein [Geobacillus sp. Y412MC52] Length = 476 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++++R Sbjct: 364 SLCAACTEACPVKIPLHELLIKHRQIIVER 393 >gi|146298998|ref|YP_001193589.1| NADH-quinone oxidoreductase, chain I [Flavobacterium johnsoniae UW101] gi|146153416|gb|ABQ04270.1| NADH dehydrogenase subunit I [Flavobacterium johnsoniae UW101] Length = 181 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 13/143 (9%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L+ K + K + L ++++K L + + H + + I + + Sbjct: 8 LSGRKKVVSNKEMTFIERLYLVAIVKGLAITLKHLFR--KKITIHYPEQVREMSPVYRGQ 65 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 H ++ G C C C+ SCP+ AI ++A D + ++ E+ Sbjct: 66 HMLKRDEQGRENCTACGLCALSCPAE----------AITMKAAERKADEKHLYREEKYAE 115 Query: 218 LEDPFRLYRCHTIMNCTQSCPKG 240 + + L RC C ++CPK Sbjct: 116 IYEINML-RCIFCGLCEEACPKD 137 >gi|77359922|ref|YP_339497.1| amino acid dehydrogenase [Pseudoalteromonas haloplanktis TAC125] gi|76874833|emb|CAI86054.1| putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Pseudoalteromonas haloplanktis TAC125] Length = 499 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 22/88 (25%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G + + L Sbjct: 328 QCIRCGACMNHCPVYTRIGGHAYGTVYPGPIGKIV-------SPHMLGLEATTHHPNASS 380 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP + K + +++ + Sbjct: 381 LCGACGDVCPVKIPIPKLLLRLRQESVK 408 >gi|313668539|ref|YP_004048823.1| oxidoreductase [Neisseria lactamica ST-640] gi|313006001|emb|CBN87460.1| putative oxidoreductase [Neisseria lactamica 020-06] Length = 1306 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|218133767|ref|ZP_03462571.1| hypothetical protein BACPEC_01636 [Bacteroides pectinophilus ATCC 43243] gi|217991142|gb|EEC57148.1| hypothetical protein BACPEC_01636 [Bacteroides pectinophilus ATCC 43243] Length = 439 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D K C+ C C +CP + L PA L R Sbjct: 350 LVLQKDPVKDLKASACIRCGKCGEACPEH-------LLPAKLAVL----------ASKGR 392 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ E + C +C+ +CP A+ I ++ +L + Sbjct: 393 IEEFEKLDGVE-CVECGSCSFTCPAKRPLAQYIKSMRKQVLANR 435 >gi|116747838|ref|YP_844525.1| hypothetical protein Sfum_0390 [Syntrophobacter fumaroxidans MPOB] gi|116696902|gb|ABK16090.1| protein of unknown function DUF224, cysteine-rich region domain protein [Syntrophobacter fumaroxidans MPOB] Length = 721 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 13/85 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CP Y G + + R+ + Sbjct: 314 RCIRCGACANVCPIYKLIGGHNYGHVYIGAIGLILTFFYHGRENARTIVR---------- 363 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKI 250 C C C G++ + I ++ Sbjct: 364 NCLNCQACKAVCAAGIDLPRLIKEV 388 >gi|297617381|ref|YP_003702540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145218|gb|ADI01975.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 199 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 12/91 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L C+ C C +CP P +++ SR L ++ Sbjct: 27 NLDACLTCGKCVGNCPVAAITPS--YNPRQIIRDVLMGNLSR----------LVQSEEIW 74 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC NC + CP ++ + +I+ ++ Sbjct: 75 RCFWCANCYRVCPSDIHYPLLMMQIRYKAIE 105 >gi|220913844|ref|YP_002489153.1| iron-sulfur cluster binding protein [Arthrobacter chlorophenolicus A6] gi|219860722|gb|ACL41064.1| iron-sulfur cluster binding protein [Arthrobacter chlorophenolicus A6] Length = 490 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 26/95 (27%), Gaps = 5/95 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C+ C CP Y G L + E +L Sbjct: 320 MGRSALHCIRCSACINVCPVYERTGGHAYGSTYPGPIGAILSPLMTGVEAEENGSLPYAS 379 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C +CP +N + ++ +D Sbjct: 380 SL-----CGACYDACPVKINIPDILVHLRGKDVDA 409 >gi|317164035|gb|ADV07576.1| putative ferredoxin [Neisseria gonorrhoeae TCDC-NG08107] Length = 560 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 286 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 341 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 342 EAGLGDCINCAMCVQVCPVGIDI 364 >gi|260577336|ref|ZP_05845308.1| conserved hypothetical protein [Rhodobacter sp. SW2] gi|259020456|gb|EEW23780.1| conserved hypothetical protein [Rhodobacter sp. SW2] Length = 251 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 15/99 (15%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP- 221 ++ C+ C C+ +CPS + P ++Q E L+ + D Sbjct: 40 YDHEIHGCLNCGICTATCPSAQYYD---YSPREIVQLL----------WTENLEGIYDAM 86 Query: 222 -FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +++ C C CP +P + ++ + + ++ Sbjct: 87 QEKIWACAQCYTCAARCPFENSPGGLVMIMREVAIKHEL 125 >gi|218512750|ref|ZP_03509590.1| glycolate oxidase subunit F protein [Rhizobium etli 8C-3] Length = 86 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + L +CV C C+ +CP+Y + P + + ++++ Sbjct: 2 QTNFTPAQLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEN 61 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 E + +++ RC + + C +C Sbjct: 62 GRPADAEVVTHID------RCLSCLACVTTC 86 >gi|194098329|ref|YP_002001387.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|291044087|ref|ZP_06569803.1| ferredoxin [Neisseria gonorrhoeae DGI2] gi|193933619|gb|ACF29443.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|291012550|gb|EFE04539.1| ferredoxin [Neisseria gonorrhoeae DGI2] Length = 548 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP + S + +++ R E +G R + Sbjct: 274 FMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDA----ERGEPRGARKKTVNKE 329 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 330 EAGLGDCINCAMCVQVCPVGIDI 352 >gi|134046563|ref|YP_001098048.1| formate dehydrogenase subunit beta (F420) [Methanococcus maripaludis C5] gi|132664188|gb|ABO35834.1| formate dehydrogenase, beta subunit (F420) [Methanococcus maripaludis C5] Length = 375 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 72/268 (26%), Gaps = 40/268 (14%) Query: 1 MVEIMLPKRSRVKRGKIWNA---------PTGEKNLKEYRIYRWNPDNKGNPCMDT--YY 49 M L KR ++ + KI+ P K + E Y +P++ +D + Sbjct: 99 MAINELEKRHQIDKDKIYTIGLNCGGTVPPQTAKKMIEL-FYDVDPEDVIKEEIDKGKFI 157 Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIK 108 ++L + + + R C C + + LAC + Sbjct: 158 IELKDGSEKSVKIDELEEEGY---------GRRTNCQRCELKVPRNADLACGNWGAEKGW 208 Query: 109 GAIAVYPLPHMSVIKD--------LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 + V ++K+ + IE + + K KE L Sbjct: 209 TFVEVGSEKGEELLKNAQKEGYINVKAPSEKALEIRGKIEKSMINLGKKFQKEHLDEKYP 268 Query: 161 RQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + Y C+ C C CP A +L + Sbjct: 269 SPEKWNEYWSRCIKCYGCRDVCPIC--------FCKECALAEDYLDKGTIPPDPIMFQGI 320 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + C C CP + AK Sbjct: 321 RLSHMSFSCINCGQCEDVCPVEIPLAKI 348 >gi|118473259|ref|YP_885005.1| iron-sulfur cluster binding protein [Mycobacterium smegmatis str. MC2 155] gi|118174546|gb|ABK75442.1| iron-sulfur cluster binding protein [Mycobacterium smegmatis str. MC2 155] Length = 489 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 44/173 (25%), Gaps = 12/173 (6%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 236 NGRMCLTLPETLITVMGIEKIVPTFADLEVFMQLLPRSSTAERMNPYTSMWTGVHPGDGP 295 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +E D + L C+ C+ C CP Y G L Sbjct: 296 QEFHLVLLDNGRTRVLADEVGRAALHCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAIL 355 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 G N P Y C ++CP ++ + ++ +D Sbjct: 356 SPQLTGTTGHDDPNASLP---YASSLCGACFEACPVRIDIPSILVHLRAQQVD 405 >gi|312136919|ref|YP_004004256.1| formate dehydrogenase, beta subunit (f420) [Methanothermus fervidus DSM 2088] gi|311224638|gb|ADP77494.1| formate dehydrogenase, beta subunit (F420) [Methanothermus fervidus DSM 2088] Length = 392 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 9/118 (7%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + W + + E ++ +C+ C C +CP + L Sbjct: 260 AMVNLAKKWQQKEFKDKKDVIEIFKE---YMEEFRKCIKCYGCREACPLCYCEECS-LES 315 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R I ERL + C C +CP + + ++ Sbjct: 316 ETPEWFKRGEIPPSPILHLERL-----LHTIDSCVNCGQCEDACPAEIPLTRIWHELN 368 >gi|256828654|ref|YP_003157382.1| heterodisulfide reductase subunit C [Desulfomicrobium baculatum DSM 4028] gi|256577830|gb|ACU88966.1| heterodisulfide reductase, C subunit [Desulfomicrobium baculatum DSM 4028] Length = 202 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 14/131 (10%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 F +R + ++ A + + + + C C C+ CP Sbjct: 2 STGRFAVLYRKLGMSMQIFDLATADLEFVAEVEARSHQKIRNCYQCGNCTAGCP------ 55 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + + Q R + + + + L+ C + +CT CP ++ A I Sbjct: 56 YTFAYDYSVSQIMRLIQTGQ-------KEAVLKSRSLWLCGSCQSCTTRCPNMIDVA-LI 107 Query: 248 AKIKMMLLDRK 258 + + Sbjct: 108 MDVCRHMAREA 118 >gi|332798003|ref|YP_004459503.1| FAD linked oxidase domain-containing protein [Acidianus hospitalis W1] gi|332695738|gb|AEE95205.1| FAD linked oxidase domain protein [Acidianus hospitalis W1] Length = 991 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 19/104 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYW-------WNSDRYLGPAILLQAYRWLI--DSRDEFQGE 213 +D C+ CA C T CP + + ++ Y D D E Sbjct: 509 FVDYALTCIDCAMCVTVCPQFKLVPQWPYAPKGMFDFTRGVISYYELHNSVDIPDSAIAE 568 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + CH C CP + + + K+ ++ + Sbjct: 569 ----------ISGCHKCGLCDGVCPAKIPISTLLIKLNSLVAKK 602 >gi|167759012|ref|ZP_02431139.1| hypothetical protein CLOSCI_01359 [Clostridium scindens ATCC 35704] gi|167663419|gb|EDS07549.1| hypothetical protein CLOSCI_01359 [Clostridium scindens ATCC 35704] Length = 440 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 19/112 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L +D C+ C C +CPS R + Sbjct: 344 TKTSSSILGFTKDEVAQFEPSACINCGRCVDACPS------------------RLIPSRL 385 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 ++ + C +C+ CP +AI ++ + +RK Sbjct: 386 ADYAEHHDEEAFTSHEGLECMECGSCSFVCPAKRQLKQAIGSMRKIAMANRK 437 >gi|304394102|ref|ZP_07376025.1| formate dehydrogenase, alpha subunit [Ahrensia sp. R2A130] gi|303293542|gb|EFL87919.1| formate dehydrogenase, alpha subunit [Ahrensia sp. R2A130] Length = 931 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 53/214 (24%), Gaps = 37/214 (17%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLAC------ 100 VD+ + + + P L C +C + I+G LA Sbjct: 12 VDVTASPNESIWTVAKREGTRIPHLCHLDQPGYRADGNCRACMVEIEGERVLAASCKRKV 71 Query: 101 --------VKDMKDIKGAIAVY------PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 + D + P + + F + + Sbjct: 72 SDGMVVKTDTERADKSRRMVFELLLADMPEQAVDAKSSFHDWLGEFSIEGGRLPSKHADN 131 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L + + C+ C C +C N LG A + D Sbjct: 132 GAAITLSPLHDASNPAIAVNMDACIACNLCVRACREVQVND--VLGMADRGHHSVPVFD- 188 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + DP + C T C Q+CP G Sbjct: 189 -----------IHDPMGVSTCVTCGECVQACPTG 211 >gi|283852915|ref|ZP_06370175.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. FW1012B] gi|283571673|gb|EFC19673.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. FW1012B] Length = 434 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q D L C+ C C CP Y + L D D Sbjct: 13 QIDDQLVACMRCGMCQAVCPLYAETGLEGHVARGKIALLECLAD------EVIKDPAGVK 66 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL C +C +CP G+ K + L Sbjct: 67 ERLDACLLCGSCQANCPSGVKALDIFLKARAFL 99 >gi|194336395|ref|YP_002018189.1| CoB--CoM heterodisulfide reductase [Pelodictyon phaeoclathratiforme BU-1] gi|194308872|gb|ACF43572.1| CoB--CoM heterodisulfide reductase [Pelodictyon phaeoclathratiforme BU-1] Length = 497 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP+ + + + R + Q +++ L+ C Sbjct: 22 CYQCGKCTAGCPAGAFMDNP------PARIMRLV-------QANYIEDAMKSDALWFCVG 68 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 M CT CP+ ++ A + ++ + L++ I Sbjct: 69 CMTCTARCPQNMDIAATMDSLRALALEKDI 98 >gi|269126655|ref|YP_003300025.1| hypothetical protein Tcur_2424 [Thermomonospora curvata DSM 43183] gi|268311613|gb|ACY97987.1| protein of unknown function DUF162 [Thermomonospora curvata DSM 43183] Length = 479 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 42/180 (23%), Gaps = 23/180 (12%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 + + V + V+ L+ + + W Sbjct: 231 RVCLTVPETLICVLGIDQVVPSWRDLEVVLQLLPRAAAGERMSPYVSTWTGVSEHDGPAR 290 Query: 154 LLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----Y 200 + D + L C+ CA C CP Y A + Sbjct: 291 MHLVLLDNGRTAMLADRVGRSALRCIRCAACLPVCPVYERTGGAAYAAAGGGELSGPIGA 350 Query: 201 RWLIDSR--DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 W +R D L + C CP ++ + ++ ++ + Sbjct: 351 VWTPQTRGVDGAAEASLP--------FASTLCGACGDVCPVEIDIPGVLVHLRGKVVQAR 402 >gi|258404336|ref|YP_003197078.1| heterodisulfide reductase subunit C [Desulfohalobium retbaense DSM 5692] gi|257796563|gb|ACV67500.1| heterodisulfide reductase subunit C [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 13/95 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C C C+ CP ++ + Q R + + D + Sbjct: 23 HQDVALCYQCGNCTAGCP------YTFVYDIPVHQIMRLVQAGQ-------KDTVLRSRS 69 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T +CT CP ++ A+ + ++ M Sbjct: 70 LWLCATCQSCTTRCPNNIDVAQIMDVLRHMARREG 104 >gi|119871716|ref|YP_929723.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673124|gb|ABL87380.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 431 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%) Query: 165 DGLYECVMCACCSTSCPSYWWNS-----DRYLGPAILLQAYRWLIDSRDEFQ--GERLDN 217 CV CA C+ SCP ++ + ++ +L+A ++ + R + G R+ Sbjct: 13 HYFENCVGCAACAPSCPYFYVDERYSPVEKAEFLREMLRA-KYTLAGRLFGRFVGARMPK 71 Query: 218 LEDPFR-----LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ED YRC +C +CP G++ + ++ L Sbjct: 72 SEDEMWKILEFAYRCTNCGHCYVTCPFGIDSGAMVRLLRQAL 113 >gi|319956015|ref|YP_004167278.1| hypothetical protein Nitsa_0258 [Nitratifractor salsuginis DSM 16511] gi|319418419|gb|ADV45529.1| protein of unknown function DUF224 cysteine-rich region domain protein [Nitratifractor salsuginis DSM 16511] Length = 437 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 6/100 (6%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E C+ C C C + N D P + E D Sbjct: 1 MEKFHYTSVSDACIKCGKCIPGCTIHLINPDETTSPRGFIDLLGAYERGELELDKNAKDI 60 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C CT+ CP L I +++ + ++ Sbjct: 61 F---ESCFLCTH---CTEVCPNSLPTDMVIEEVRHEIAEK 94 >gi|284162030|ref|YP_003400653.1| hypothetical protein Arcpr_0919 [Archaeoglobus profundus DSM 5631] gi|284012027|gb|ADB57980.1| protein of unknown function DUF224 cysteine-rich region domain protein [Archaeoglobus profundus DSM 5631] Length = 390 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 13/86 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C SCP + P ++ A R+ + ++++ + C Sbjct: 20 QCIQCGTCGGSCP---YGMYSPYTPRRMILAIRFGL----------IEDIISSNAHWLCT 66 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 + C+ CP + I L Sbjct: 67 SCQLCSSRCPSRIPITDGIIPALREL 92 >gi|119897730|ref|YP_932943.1| electron transport complex protein RnfC [Azoarcus sp. BH72] gi|119670143|emb|CAL94056.1| putative electronen transport complex protein RnfC [Azoarcus sp. BH72] Length = 552 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ +CP+ + Y R+ + + + L+ C Sbjct: 363 PCIRCGECARACPAELQPFELYWFGRA-----------RNFGKAQ-------EYHLFDCI 404 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 405 ECGCCAYVCPAHIPLVD 421 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + + L++C+ C CC+ CP++ D + + A D+ D + Sbjct: 385 WFGRARNFGKAQEYHLFDCIECGCCAYVCPAHIPLVDYFRFSKGEIWARERDKDAADAAR 444 Query: 212 GE 213 Sbjct: 445 ER 446 >gi|316985875|gb|EFV64816.1| 4Fe-4S binding domain protein [Neisseria meningitidis H44/76] gi|325140200|gb|EGC62726.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis CU385] Length = 1306 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L++A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLIEAFLYEEQTRRGVSIKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|311112169|ref|YP_003983391.1| iron-sulfur cluster-binding protein [Rothia dentocariosa ATCC 17931] gi|310943663|gb|ADP39957.1| iron-sulfur cluster-binding protein [Rothia dentocariosa ATCC 17931] Length = 541 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 5/94 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L Q ++ + Sbjct: 326 RQALRCIRCSACMNVCPVYERAGGHAYGSTYPGPIGAIL-----SPQLSGIEAAHNNSLP 380 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C + CP +N + + ++ ++ K Sbjct: 381 YASSLCGACYEVCPVKINFPEVLVHLRGKDVEAK 414 >gi|315126996|ref|YP_004068999.1| electron transport complex protein RnfC [Pseudoalteromonas sp. SM9913] gi|315015510|gb|ADT68848.1| electron transport complex protein RnfC [Pseudoalteromonas sp. SM9913] Length = 679 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 22/111 (19%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L H++ + C+ C+ C+ +CP+ ++L Q +W S++ Sbjct: 358 NCILAPDHKELAEPGPEKACIRCSACADACPA-----------SLLPQQLQWFAKSKE-- 404 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 D L+ L+ C C CP + + A +IK + ++ Sbjct: 405 ----YDKLQ-EHNLFDCIECGACAYVCPSEIPLVQYYRVAKVEIKEQIAEK 450 >gi|300711314|ref|YP_003737128.1| FAD-linked oxidase domain protein [Halalkalicoccus jeotgali B3] gi|299124997|gb|ADJ15336.1| FAD-linked oxidase domain protein [Halalkalicoccus jeotgali B3] Length = 991 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 42/157 (26%), Gaps = 20/157 (12%) Query: 120 SVIKDLVVDMSHFY-----------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V +DL + ++ + L D Sbjct: 525 DVFRDLKTAFDPDWLLNPGSVCGDFDMSENLRFGPDYEFEAGFEPSLNWENDNGFQGMAE 584 Query: 169 ECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C C C TS CP+Y + R + S D E+ D Sbjct: 585 LCHGCGGCRTSQDGAGGVMCPTYRAADEEITSTRGRANMLRQAM-SGDLPDEEQFDVEFM 643 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C + CP ++ AK +++ L R Sbjct: 644 HEVMDLCVGCKGCARDCPSEVDMAKMKVEVEHEYLKR 680 >gi|157962176|ref|YP_001502210.1| electron transport complex protein RnfC [Shewanella pealeana ATCC 700345] gi|157847176|gb|ABV87675.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella pealeana ATCC 700345] Length = 825 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 22/115 (19%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 LL S E+ C+ C C+ CPS L P L Sbjct: 358 KGTNCVLLPSSEEIAPEQPEKPCIRCGECAVVCPSL-------LLPQQLFWH-------- 402 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 + E D F L+ C C+ CP + + IAK I+ ++K Sbjct: 403 --AKAEEYDKA-SSFNLHDCIECGCCSFVCPSDIPLVEYYRIAKSAIRTQTEEKK 454 >gi|300742253|ref|ZP_07072274.1| iron-sulfur cluster-binding protein [Rothia dentocariosa M567] gi|300381438|gb|EFJ78000.1| iron-sulfur cluster-binding protein [Rothia dentocariosa M567] Length = 531 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 5/94 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L Q ++ + Sbjct: 316 RQALRCIRCSACMNVCPVYERAGGHAYGSTYPGPIGAIL-----SPQLSGIEAAHNNSLP 370 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C + CP +N + + ++ ++ K Sbjct: 371 YASSLCGACYEVCPVKINFPEVLVHLRGKDVEAK 404 >gi|145637714|ref|ZP_01793367.1| electron transport complex protein RnfC [Haemophilus influenzae PittHH] gi|145269116|gb|EDK09066.1| electron transport complex protein RnfC [Haemophilus influenzae PittHH] Length = 561 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 354 CIRCSSCSDACPVNLMPQQLY-----------WFARSEDHKKSE-------EYALKDCIE 395 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 396 CGICAYVCPSHIPL---IQYFRQE--KAKI 420 >gi|89068756|ref|ZP_01156142.1| FAD linked oxidase-like [Oceanicola granulosus HTCC2516] gi|89045719|gb|EAR51781.1| FAD linked oxidase-like [Oceanicola granulosus HTCC2516] Length = 940 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 28/100 (28%), Gaps = 15/100 (15%) Query: 165 DGLYECVMCACCST------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C C CPSY DR L P R E + L Sbjct: 556 RDARRCNGNGQCFGRAPDDVMCPSYRATGDRLLSPKGRAALLRAWA---REPTPDLARAL 612 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C + C CP ++ I ++K + Sbjct: 613 D--ESLDACLSCRACASQCPVKVD----IPEMKSRYRAAR 646 >gi|152990116|ref|YP_001355838.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Nitratiruptor sp. SB155-2] gi|151421977|dbj|BAF69481.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Nitratiruptor sp. SB155-2] Length = 424 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C +C + N D P ++ E D Sbjct: 2 FEFTSVSDACIKCGKCIPTCTIHQVNPDEVTSPRGFIELLGDYQKGEIELDKTAKDI--- 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NC CP L I +++ + + Sbjct: 59 ---FESCFLCTNCVDVCPNSLPTDMIIEEVRHDIAQK 92 >gi|90411788|ref|ZP_01219797.1| conserved hypothetical iron-sulphur protein [Photobacterium profundum 3TCK] gi|90327350|gb|EAS43714.1| conserved hypothetical iron-sulphur protein [Photobacterium profundum 3TCK] Length = 486 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G + + S E+ +L L Sbjct: 321 QCIRCGACMNHCPVYTRIGGHAYGTVYPGPIGKII--SPHMMGLEKTKDLVTASSL---- 374 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 375 -CGACGEVCPVRIPIPEMLQRLRNEA 399 >gi|78188995|ref|YP_379333.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium chlorochromatii CaD3] gi|78171194|gb|ABB28290.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium chlorochromatii CaD3] Length = 502 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP+ + + + R + Q +++ L+ C Sbjct: 27 CYQCGKCTAGCPAGAFMDNP------PARMMRLV-------QSGNVNDALLSDSLWFCVG 73 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 M CT CP+ + A + +++ M L++ + Sbjct: 74 CMTCTARCPQNMEIAGTMDELRAMALEQGV 103 >gi|15676889|ref|NP_274034.1| putative oxidoreductase [Neisseria meningitidis MC58] gi|7226239|gb|AAF41401.1| putative oxidoreductase [Neisseria meningitidis MC58] gi|325200317|gb|ADY95772.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis H44/76] Length = 1277 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L++A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLIEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|303245360|ref|ZP_07331644.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] gi|302493209|gb|EFL53071.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio fructosovorans JJ] Length = 434 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q D L C+ C C CP Y + L D D Sbjct: 13 QIDDQLVVCMRCGMCQAVCPLYAETGLEAHVARGKIALLECLAD------EVIKDPAGVK 66 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL C +C +CP G+ K + L Sbjct: 67 ERLDACLLCGSCQANCPSGVKALDIFLKARAFL 99 >gi|294341247|emb|CAZ89648.1| putative D-lactate dehydrogenase (cytochrome) [Thiomonas sp. 3As] Length = 1318 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C + C ++ + D+ L ++L++A+ + +R + ED Sbjct: 846 DCLRCGKCKSVCATHVPRANLLYSPRDKILATSLLIEAFLYEEQTRRGVSIRHWEEFEDV 905 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 906 --ADHCTVCHKCVTPCPVDIDFGDVTMNMRNLL 936 >gi|260892467|ref|YP_003238564.1| protein of unknown function DUF162 [Ammonifex degensii KC4] gi|260864608|gb|ACX51714.1| protein of unknown function DUF162 [Ammonifex degensii KC4] Length = 710 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 28/104 (26%), Gaps = 8/104 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +C+ CA C CP Y + + + Sbjct: 295 RTRMAADPVFREALKCIRCAACLNVCPVYQQLGGTFGAVYTGGIGVILTAFFTGFEEAAQ 354 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L L C C + C ++ I +++ ++ +K Sbjct: 355 LQEL--------CLGCQRCREYCSANIDLPGLIEELRRRVVAKK 390 >gi|296137070|ref|YP_003644312.1| FAD linked oxidase domain protein [Thiomonas intermedia K12] gi|295797192|gb|ADG31982.1| FAD linked oxidase domain protein [Thiomonas intermedia K12] Length = 1330 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C + C ++ + D+ L ++L++A+ + +R + ED Sbjct: 858 DCLRCGKCKSVCATHVPRANLLYSPRDKILATSLLIEAFLYEEQTRRGVSIRHWEEFEDV 917 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 918 --ADHCTVCHKCVTPCPVDIDFGDVTMNMRNLL 948 >gi|167627826|ref|YP_001678326.1| FAD dependent 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597827|gb|ABZ87825.1| 4Fe-4S ferredoxin, FAD dependent [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 940 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y + I+ L + LL +D + +C+ C C + C Sbjct: 495 DELYKVMQEIKLLLDPHNLFNPGVLLNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS D L P L Y+ ++ D+ + + + + C C CP Sbjct: 555 PSR----DLSLTPRQRLSVYKEMMILKETDKAKYKDYKKKYQYYGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ + Sbjct: 611 VEINTGSFIKDLRAEQNKANV 631 >gi|325266815|ref|ZP_08133487.1| cytochrome c oxidase accessory protein CcoG [Kingella denitrificans ATCC 33394] gi|324981747|gb|EGC17387.1| cytochrome c oxidase accessory protein CcoG [Kingella denitrificans ATCC 33394] Length = 476 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFR 223 + C CP Y L+ +Y + R E +G R E Sbjct: 205 WLFGHIMREQVCLHMCP-YARFQSAMFDHDTLVISY---DEERGEPRGARKKTAERGEGG 260 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 + C C Q CP G++ + Sbjct: 261 IGDCINCTMCVQVCPVGIDIRDGLQY 286 >gi|296114624|ref|ZP_06833277.1| iron-sulfur binding oxidoreductase [Gluconacetobacter hansenii ATCC 23769] gi|295978980|gb|EFG85705.1| iron-sulfur binding oxidoreductase [Gluconacetobacter hansenii ATCC 23769] Length = 468 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 55/182 (30%), Gaps = 21/182 (11%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV--------DMSHFYSQHR 137 G+ + + N I + L + + DL V + +Q+ Sbjct: 213 GTFVVCTNEGNADLSATVPNLHIATIGIERL--VPRMADLGVFIRLLSRSALGSPITQYT 270 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + R ++ + +C+ C C +CP Y + G Sbjct: 271 THFRGPQKGGEMHVVFVDNGRSARLGMEDFWTSLKCIRCGACMNTCPVYRRSGGLSYGAV 330 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D ER + Y +CT CP +N + + K + +L Sbjct: 331 YSGPIGAII----DPTFNERKYSTLP----YASTLNGSCTNVCPVKINIHEQLYKWRRVL 382 Query: 255 LD 256 + Sbjct: 383 VQ 384 >gi|83589661|ref|YP_429670.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572575|gb|ABC19127.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 190 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 13/110 (11%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + L+S + + L +C C CS CP W P +++ + + Sbjct: 11 RRNQALKSQVEAESGVVLSDCYQCGKCSAGCPVAAWMDYT---PRQVIRLLQLGL----- 62 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ + C C CP+ +N + + ++ R + Sbjct: 63 -----VEEALKSHTPWLCACCQACYTRCPREVNLPRLMEVVRQEARRRGL 107 >gi|77465040|ref|YP_354543.1| RdxA, iron-sulfur cluster-binding protein [Rhodobacter sphaeroides 2.4.1] gi|548712|sp|Q01854|RDXA_RHOS4 RecName: Full=Protein rdxA gi|151927|gb|AAA26117.1| 52 kDa protein [Rhodobacter sphaeroides] gi|77389458|gb|ABA80642.1| RdxA, iron-sulfur cluster-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 469 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 30/119 (25%), Gaps = 9/119 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L FY + + C +CP Sbjct: 158 LTGGAWVFYFADAPTLLNGLVTLTAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPR 217 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + I + AYR D R E +G+R C M C CP G++ Sbjct: 218 IQAALMDEETITV-AYR---DWRGEPRGKR-----SETGRGDCIDCMACVNVCPMGIDI 267 >gi|170741450|ref|YP_001770105.1| formate dehydrogenase subunit alpha [Methylobacterium sp. 4-46] gi|168195724|gb|ACA17671.1| formate dehydrogenase, alpha subunit [Methylobacterium sp. 4-46] Length = 988 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 64/215 (29%), Gaps = 37/215 (17%) Query: 47 TYYVD---LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLAC 100 + +D ++ L + P L + + C +C + I+G LA Sbjct: 70 VFELDGEQVEARPGETLWAVAQRLGTHIPHLCHKPAPGYRPDGNCRACMVEIEGERVLAA 129 Query: 101 VKDMK----DIKGAIAVYPLPHMSVIKDLVVDM-----------SHFYSQHRSIEPWLKT 145 + +++ +L+V SHF+SQ + Sbjct: 130 SCKRTPAVGMKVKTQTDRAVKARAMVMELLVADQPERATSHDPDSHFWSQADHVGVSESR 189 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + SH L C+ C C +C N ++ AYR Sbjct: 190 FPAEERWATDASHPA--MRVNLDACIQCNLCVRACREVQVND-------VIGMAYR---- 236 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + +DP C C Q+CP G Sbjct: 237 ---NADAKVVFDFDDPMGSSTCVACGECVQACPTG 268 >gi|91774831|ref|YP_544587.1| FAD linked oxidase-like protein [Methylobacillus flagellatus KT] gi|91708818|gb|ABE48746.1| FAD linked oxidase-like protein [Methylobacillus flagellatus KT] Length = 1271 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 167 LYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C C ++ + ++ LG ++L++A+ + +R D Sbjct: 798 ISDCLRCGKCKPVCTTHVPRANLLYSPRNKILGTSLLIEAFLYEEQTRRGISLRHFDEFN 857 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C + CP ++ ++ L ++ Sbjct: 858 DVS--DHCTVCHRCEKPCPVDIDFGDVSIAMRNFLREQG 894 >gi|54308602|ref|YP_129622.1| iron-sulphur protein [Photobacterium profundum SS9] gi|46913031|emb|CAG19820.1| conserved hypothetical iron-sulphur protein [Photobacterium profundum SS9] Length = 486 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G + + S E+ +L L Sbjct: 321 QCIRCGACMNHCPVYTRIGGHAYGTVYPGPIGKII--SPHMMGLEKTKDLITASSL---- 374 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 375 -CGACGEVCPVRIPIPEMLQRLRNEA 399 >gi|226308754|ref|YP_002768714.1| iron-sulfur protein [Rhodococcus erythropolis PR4] gi|226187871|dbj|BAH35975.1| putative iron-sulfur protein [Rhodococcus erythropolis PR4] Length = 506 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 28/182 (15%) Query: 93 DGTNTLACVKDMKDIKGAIAVYPL-PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L K + + G + P + V L+ S + W Sbjct: 245 NGRMCLTLPKTLITVMGIEKILPTYQDLEVFLQLLPRSSTGERMNPYTSLWTGVTPDDGP 304 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 +E D + L + C+ C+ C CP Y Y GP + Sbjct: 305 QEFHLVLLDNGRTAALADKIGREALSCIRCSACLNVCPVYERTGGHAYGSTYPGPIGAVL 364 Query: 199 AYRWL-IDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + +D DP + C +CP ++ + +++ + Sbjct: 365 TPQLAGMHGKD-----------DPNSTLPFASSLCGACFDACPVKIDIPSLLVELRHQKV 413 Query: 256 DR 257 ++ Sbjct: 414 EQ 415 >gi|242243890|ref|ZP_04798333.1| formate dehydrogenase, alpha subunit [Staphylococcus epidermidis W23144] gi|242232664|gb|EES34976.1| formate dehydrogenase, alpha subunit [Staphylococcus epidermidis W23144] Length = 989 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 59/221 (26%), Gaps = 35/221 (15%) Query: 39 NKGNPCM-DTYYVDLDNCGPMV-----LDGLLYIKNKIDPTLTLRRS-CREGICGSCGMN 91 G M ++LD +V L + +N P + S C +C + Sbjct: 1 MGGEKYMSKEIKINLDGKDYLVEAGTNLLEFIRSRNTFVPAICYNESMGPIQTCDTCMVE 60 Query: 92 IDGTNTLACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRS 138 I+G AC ++ L + + + H + Sbjct: 61 INGDIARACGTSIESSMTVNTYNHHVKTSQKEALDRILEKHMLYCTVCDYNNGDCEIHNT 120 Query: 139 IEPW-LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ W ++ + K ++ + +C++C C +C N + Sbjct: 121 MDKWGIQHQTYKYKRKPYEKDYGPFYRYDPNQCILCGRCVEACQDVEVNETIRIDWERDH 180 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 W D C + C CP Sbjct: 181 PRVIWDNDVPINES--------------SCVSCGQCATVCP 207 >gi|222478648|ref|YP_002564885.1| FAD linked oxidase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222451550|gb|ACM55815.1| FAD linked oxidase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 1032 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 36/124 (29%), Gaps = 12/124 (9%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----CPSYWWNSDRY 190 R + + L E+ + C C C CP+Y + + Sbjct: 571 MRENLRYGPAYQSIEPQTTLDFSEEGGFSHLVELCNGCGTCREVDSGVMCPTYRASEEEI 630 Query: 191 LGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R I DE +R L C C CP G++ AK Sbjct: 631 QATRGRANMLRAAISGELDDDEIHSDRFQ----EEVLGLCVGCKGCKSDCPTGVDLAKLK 686 Query: 248 AKIK 251 A++K Sbjct: 687 AEVK 690 >gi|328952542|ref|YP_004369876.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452866|gb|AEB08695.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] Length = 431 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C C+ CS+ CP + L P QA R + R L D + C Sbjct: 19 HACYTCSTCSSRCPVSGVDG---LDPR---QAIRMIAYG-------RAQELIDSRFPWIC 65 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP + K + + + K+ Sbjct: 66 TLCGRCESACPMNVPLLKILRTTRGLRERNKV 97 >gi|239817041|ref|YP_002945951.1| formate dehydrogenase, subunit alpha [Variovorax paradoxus S110] gi|239803618|gb|ACS20685.1| formate dehydrogenase, alpha subunit [Variovorax paradoxus S110] Length = 957 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 67/213 (31%), Gaps = 43/213 (20%) Query: 72 PTLTLRRSCR-EGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 P L + R +G C +C + + G TLA + + K +VV+M Sbjct: 44 PHLCFKDGYRADGNCRACVVEVKGERTLAPSCCRNVTAGMEVKATSERALKSQK-MVVEM 102 Query: 130 --------------SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--------KIDGL 167 QH + W K + EL ++ L Sbjct: 103 LLSDMPDQGYKWIGDDATQQHGELSAWAKKLDIAVRPELKALRREQPKADISHPAMAVNL 162 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +C N ++ A R + + +L+DP C Sbjct: 163 DACIQCNRCVRACREEQVND-------VIGYALR-------GGDSKIVFDLDDPMGDSTC 208 Query: 228 HTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C Q+CP G L P I +DRK+ Sbjct: 209 VACGECVQACPTGALMPKSHIG---SQAVDRKV 238 >gi|156938156|ref|YP_001435952.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156567140|gb|ABU82545.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 479 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 18/145 (12%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNS 187 MS R ++ + + + D I + +C+ C CS +CP Y+ Sbjct: 1 MSESMDFSRMMQMLMSQKTSIDEAIKKAMKKVDAVMIHYIEDCLNCGTCSPACP-YFVAG 59 Query: 188 DRY-----------LGPAILLQAYRWL--IDSRDE-FQGERLDNLEDPFRLYRCHTIMNC 233 +Y + + R L + D+ E + L D +Y C +C Sbjct: 60 PQYSPVNKAEELRKIYRREMTILGRLLGPLVGADKPKTEEDMKRLMDL--VYACTNCGHC 117 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 +C G++ I +K +L + Sbjct: 118 YYTCTVGIHSGTMIGLLKSILTEAG 142 >gi|120403694|ref|YP_953523.1| iron-sulfur cluster binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956512|gb|ABM13517.1| iron-sulfur cluster binding protein [Mycobacterium vanbaalenii PYR-1] Length = 486 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 26/94 (27%), Gaps = 15/94 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 315 RCIRCSACLNVCPVYERTGGHSYGSVYPGPIGAV----LTPQLRGTASD------VDKSL 364 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C CP ++ + ++ ++D Sbjct: 365 PFASSLCGACFDVCPVRIDIPSMLVHLRTRVVDE 398 >gi|194336392|ref|YP_002018186.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308869|gb|ACF43569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 276 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 9/132 (6%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR----QKIDGLYECVMCACCSTSCPSYWW 185 S F + + + +P E + + R + C+ C C +CP + Sbjct: 122 SDFSDLIGDSKEHPRQIPEEPLLERIGKMDTRERFDFWQEEFSRCIKCYACRQACPMCYC 181 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + +W+ S + + RC NC ++CP + Sbjct: 182 RRC-----IVDNNQPQWINTSSHTLGNFEWNIVRAFHLAGRCVQCGNCDRACPVNIPLRL 236 Query: 246 AIAKIKMMLLDR 257 ++ +++ Sbjct: 237 INQRMAKEVMEE 248 >gi|83950971|ref|ZP_00959704.1| formate dehydrogenase, alpha subunit [Roseovarius nubinhibens ISM] gi|83838870|gb|EAP78166.1| formate dehydrogenase, alpha subunit [Roseovarius nubinhibens ISM] Length = 920 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 52/175 (29%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLAC--------------VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G TLA + + V L +D Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPADGMVVKTDTARAETARKMVVEMLVADQPPRDAAH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S ++ ++ PK + + +D L C+ C C +C Sbjct: 107 DKSSHLWDMAEMQGVSQSRFPKLEEGRIPLLDDSHVAMSVNLDACIQCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPTFD------------MADPMGASTCVACGECVQACPTG 207 >gi|170764277|ref|ZP_02640147.2| iron-sulfur cluster-binding protein [Clostridium perfringens CPE str. F4969] gi|170714008|gb|EDT26190.1| iron-sulfur cluster-binding protein [Clostridium perfringens CPE str. F4969] Length = 370 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP + ++ + + + Sbjct: 7 KKNLEDCVNCGLCYKVCPMMNTFGES----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT+SCPK +N + ++ Sbjct: 51 AYSCMLCNACTESCPKDINLKEMFQNLR 78 >gi|119944507|ref|YP_942187.1| electron transport complex, RnfABCDGE type, C subunit [Psychromonas ingrahamii 37] gi|119863111|gb|ABM02588.1| electron transport complex, RnfABCDGE type, C subunit [Psychromonas ingrahamii 37] Length = 857 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 18/107 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I VS L+ + E+ + C+ C CS CP+ Q Sbjct: 357 ITHTDIPVSKSCNCILVPTPEEMPEPPAEMPCIRCGECSDVCPAVLLP-----------Q 405 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 W S+D + D + L C C CP + + Sbjct: 406 QLLWYSKSQDHEK-------LDEYNLPSCIECGACAFVCPSNIPLVE 445 >gi|295696976|ref|YP_003590214.1| iron-sulfur cluster binding protein [Bacillus tusciae DSM 2912] gi|295412578|gb|ADG07070.1| iron-sulfur cluster binding protein [Bacillus tusciae DSM 2912] Length = 480 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 6/95 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y G + +R +L Sbjct: 305 FREALQCIRCGACLNVCPVYRQIGGHAYGWVYPGPIGAVIT-PLLTDDLDRWGDLPYASS 363 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C ++CP + + + ++ + Sbjct: 364 L-----CAACAEACPVKIPLHDMLVRHRVRYVAAG 393 >gi|255021396|ref|ZP_05293444.1| FAD linked oxidase domain protein [Acidithiobacillus caldus ATCC 51756] gi|254969259|gb|EET26773.1| FAD linked oxidase domain protein [Acidithiobacillus caldus ATCC 51756] Length = 1277 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L +L++A+ + +R + LED Sbjct: 811 DCLRCGKCKPVCMTHIPRANLLYSPRNKILATGLLIEAFLYEEQTRRGVSQQHFAALEDV 870 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C CP ++ + ++ +L R Sbjct: 871 AE--HCTTCHKCLTPCPVDIDFGEVSVHMRNILRARG 905 >gi|325287719|ref|YP_004263509.1| D-lactate dehydrogenase (cytochrome) [Cellulophaga lytica DSM 7489] gi|324323173|gb|ADY30638.1| D-lactate dehydrogenase (cytochrome) [Cellulophaga lytica DSM 7489] Length = 968 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + LL E + +C C CPSY + Sbjct: 533 RYKVDRKEPEIETLLDFSESEGILKAAEKCNGSGDCRKTEKASGAMCPSYHVTRNEKDTT 592 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ + D+ L++ F L C + C+ CP ++ A Sbjct: 593 RGRANTLREMLTNTDQANKFNQKELKEVFDL--CLSCKACSSECPSNVDVATL 643 >gi|260893190|ref|YP_003239287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] gi|260865331|gb|ACX52437.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] Length = 344 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 40/136 (29%), Gaps = 22/136 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW-------------- 184 + ++L + D + + C+ C C+ CP+ Sbjct: 205 AKFVTPPQLTGVKEKLPSLYHDPYWEELAWRCLGCGICTFLCPTCHCFDIFDRGEEEGER 264 Query: 185 -------WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 + L + R+ F + L + E + + C C C Sbjct: 265 LRCWDTCLFKEFTLHTSGHNPRASLSARLRNRFYHKLLYHYE-RYGVEGCVGCGRCVTLC 323 Query: 238 PKGLNPAKAIAKIKMM 253 P ++ + +A+++ Sbjct: 324 PVNIDIREVMAEVRRR 339 >gi|288818277|ref|YP_003432625.1| oxido/reductase iron sulfur protein [Hydrogenobacter thermophilus TK-6] gi|288787677|dbj|BAI69424.1| oxido/reductase iron sulfur protein [Hydrogenobacter thermophilus TK-6] gi|308751874|gb|ADO45357.1| protein of unknown function DUF224 cysteine-rich region domain protein [Hydrogenobacter thermophilus TK-6] Length = 399 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C + CP+Y N + L + +I+ GE ++ C Sbjct: 14 KCVKCGLCKSVCPTYSVNQEEGSFARGRLALAQMVIEGEIPLTGEVAKQWDE------CA 67 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 C CP ++ + + + M Sbjct: 68 MCRRCEWICPNDVHYKEILVYARHM 92 >gi|225872009|ref|YP_002753463.1| formate dehydrogenase, alpha subunit [Acidobacterium capsulatum ATCC 51196] gi|225791532|gb|ACO31622.1| formate dehydrogenase, alpha subunit [Acidobacterium capsulatum ATCC 51196] Length = 1005 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 31/201 (15%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVK---------- 102 N G ++D + + P + + + C +C + ++G AC Sbjct: 27 NTGERLIDVINRTQ-TPLPQVCYQPKLGPIQTCDTCVVEMNGEIVRACGTSVSPGMQLNT 85 Query: 103 ---DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS--IEPWLKTVSPKPAKELLQS 157 +K +G L + + + + + + H + + P K Q Sbjct: 86 ASARVKSAQGEAFDRILKNHQLYCSVCDNNNQDCTVHNTTALLDVEHQKYPWQPKPYPQD 145 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 H + +C++C C +C +Y N + R L D Sbjct: 146 HTNPFYRYDPNQCILCGRCVEACQNYQVNETLSINWESDHP--RVLWDG----------- 192 Query: 218 LEDPFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 193 -GSEIGGSSCVSCGHCVTVCP 212 >gi|254491903|ref|ZP_05105082.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Methylophaga thiooxidans DMS010] gi|224463381|gb|EEF79651.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Methylophaga thiooxydans DMS010] Length = 508 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 18/110 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K A +L +D C+ C C+T+CP+ Y +R Sbjct: 351 TKTANCILVGVDDAAPASEPLPCIRCGDCATACPASLLPQQLYWHSRAKD-----FDQTR 405 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D + L+ C C CP + K ++++ Sbjct: 406 D-------------YNLFDCIECGCCDYVCPSKIPLVSYFRFAKTEIMNQ 442 >gi|258406437|ref|YP_003199179.1| heterodisulfide reductase subunit C [Desulfohalobium retbaense DSM 5692] gi|257798664|gb|ACV69601.1| heterodisulfide reductase subunit C [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 13/95 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C C C+ CP ++ + Q R + + D + Sbjct: 23 HQDVALCYQCGNCTAGCP------YTFVYDIPVHQIMRLVQAGQ-------KDTVLRSRS 69 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T +CT CP ++ A+ + ++ M Sbjct: 70 LWLCATCQSCTTRCPNNIDVAQVMDVLRHMARREG 104 >gi|109899274|ref|YP_662529.1| electron transport complex, RnfABCDGE type, C subunit [Pseudoalteromonas atlantica T6c] gi|109701555|gb|ABG41475.1| electron transport complex, RnfABCDGE type, C subunit [Pseudoalteromonas atlantica T6c] Length = 890 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 LL + ++ + + C+ C+ C+ +CP L P L Sbjct: 368 NCLLLPTSDEMAEPEAEQPCIRCSACADACPVS-------LLPQQLFWH----------S 410 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + LD +D + L+ C C CP + Sbjct: 411 KAKELDKAQD-YNLFDCIECGACAYVCPSEIPLVH 444 >gi|242278074|ref|YP_002990203.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120968|gb|ACS78664.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 319 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 4/83 (4%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C +CP + RD++ + Sbjct: 197 AFWLGEMDRCIRCYACRNACPMCVCRDHCVAQSRDPHWLSQ-EAHVRDKW---MFQVIHA 252 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 RC C ++CP + Sbjct: 253 YHLTGRCTECGECQRACPVDIPI 275 >gi|256377142|ref|YP_003100802.1| hypothetical protein Amir_3037 [Actinosynnema mirum DSM 43827] gi|255921445|gb|ACU36956.1| protein of unknown function DUF162 [Actinosynnema mirum DSM 43827] Length = 467 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 23/177 (12%) Query: 93 DGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + G + P + V L+ S + W + A Sbjct: 230 NGRMCLTLPRTLISVVGVEKLVPRWQDLEVFLQLLPRSSTGERMNPYTSVWTGPTEGQTA 289 Query: 152 KELLQSHE-----DRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYR 201 +L + C+ C+ C SCP Y Y GP + + + Sbjct: 290 HVVLVDNGRTATLADPDGRAALRCIRCSACLNSCPVYERAGGHAYGSTYPGPIGAVLSPQ 349 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +R L L C CP ++ + ++ ++ K Sbjct: 350 L-------TGVDRNPTLPYASSL-----CGVCYDVCPVAIDIPSMLVHLRERVVQAK 394 >gi|109659947|gb|ABG36932.1| glycolate dehydrogenase [Chlamydomonas reinhardtii] Length = 1095 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--LIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C ++CPS ++ + YR L E + ++L + + Sbjct: 672 RCIECGFCESNCPSRDITLTPRQRISVYREMYRLKQLGPGASEEEKKQLAAMSSSYAYDG 731 Query: 227 CHTI---MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C + CP +N I ++ + Sbjct: 732 EQTCAADGMCQEKCPVKINTGDLIKSMRAEHMKE 765 >gi|317504077|ref|ZP_07962080.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella salivae DSM 15606] gi|315664819|gb|EFV04483.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella salivae DSM 15606] Length = 417 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 10/87 (11%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L +C+ C+ C+ CP R+ + + E N L Sbjct: 13 HELEQCMKCSICTVYCPVSAVEPQYPGPKHAGPDLMRYRM------KDEHFFN----DNL 62 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G+ I + + Sbjct: 63 KMCLNCKRCEVACPNGVKIGDIIQEAR 89 >gi|167623859|ref|YP_001674153.1| electron transport complex protein RnfC [Shewanella halifaxensis HAW-EB4] gi|167353881|gb|ABZ76494.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella halifaxensis HAW-EB4] Length = 810 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 54/178 (30%), Gaps = 25/178 (14%) Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI--EPWLK 144 S + + G N+ + I + L + DL D Sbjct: 296 SRVVTVTGLNSQTPGNYWMPVGTPIK-HILNTLGFSGDLANDKVIIGGPMMGYALPNVQA 354 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 V LL S+E+ C+ C C+ +CP+ L P L Sbjct: 355 PVLKGTNCILLPSNEEIADDTVEKPCIRCGECAVACPAL-------LLPQQLFWH----- 402 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK--IKMMLLDRK 258 + E D F L+ C C+ CP + + IAK I+ ++K Sbjct: 403 -----AKAEEYDKAA-SFNLHDCIECGCCSFVCPSDIPLVEYYRIAKSAIRTQTEEKK 454 >gi|159474536|ref|XP_001695381.1| glycolate dehydrogenase [Chlamydomonas reinhardtii] gi|158275864|gb|EDP01639.1| glycolate dehydrogenase [Chlamydomonas reinhardtii] Length = 1095 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--LIDSRDEFQGERLDNLEDPFRLYR 226 C+ C C ++CPS ++ + YR L E + ++L + + Sbjct: 672 RCIECGFCESNCPSRDITLTPRQRISVYREMYRLKQLGPGASEEEKKQLAAMSSSYAYDG 731 Query: 227 CHTI---MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T C + CP +N I ++ + Sbjct: 732 EQTCAADGMCQEKCPVKINTGDLIKSMRAEHMKE 765 >gi|305680036|ref|ZP_07402846.1| FAD linked oxidase, C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305660656|gb|EFM50153.1| FAD linked oxidase, C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 948 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 8/131 (6%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +VD+ +R + P + D + +CV C C CPS Sbjct: 511 MVDVKDACDPNRILNPGTIITDDPQLHLKYIKPTE-TVRDIIDDCVECGYCEPVCPSQHL 569 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + P + R + ERL E + C C +CP +N Sbjct: 570 TTT----PRQRIVIQRAIAACEASGAYDLAERLKAQEVYDVVQTCAVDGMCQTACPVNIN 625 Query: 243 PAKAIAKIKMM 253 I + Sbjct: 626 TGDLIRAKRRE 636 >gi|94969748|ref|YP_591796.1| Iron-sulfur cluster binding protein [Candidatus Koribacter versatilis Ellin345] gi|94551798|gb|ABF41722.1| Iron-sulfur cluster binding protein [Candidatus Koribacter versatilis Ellin345] Length = 471 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 25/96 (26%), Gaps = 9/96 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C+ C C CP Y ++ ++D Sbjct: 306 QQELLRCIRCGACLNKCPVYRSVGGHAFNTTYPG--------PIGSALTPIVNGMKDWGH 357 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L Y C C CP + + + + + + Sbjct: 358 LSYACSLCTACDSVCPVKIKLSGHLLENRRKYVSEG 393 >gi|325661148|ref|ZP_08149775.1| hypothetical protein HMPREF0490_00508 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472655|gb|EGC75866.1| hypothetical protein HMPREF0490_00508 [Lachnospiraceae bacterium 4_1_37FAA] Length = 438 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + K + +L +D K C+ C C +CPS S Sbjct: 331 MMGFAMFSTEVPVTKTSSAILGFSKDEVKKHEPSACINCGRCVDACPSRIVPSRLADF-- 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DE + + LE C +C+ CP + +AI ++ + Sbjct: 389 ---------AERHDEESFLKWEGLE-------CVECGSCSYVCPAKRHLKQAIGSMRKIA 432 Query: 255 LDRK 258 L K Sbjct: 433 LANK 436 >gi|239906641|ref|YP_002953382.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239796507|dbj|BAH75496.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 434 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q D L C+ C C CP Y + L D D Sbjct: 13 QIDDQLVACMRCGMCQAVCPIYAETGLEGHVARGKIALLECLAD------EVIKDPAGVK 66 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RL C +C +CP G+ K + L Sbjct: 67 ERLDACLLCGSCQANCPSGVKALDIFLKARAFL 99 >gi|254468948|ref|ZP_05082354.1| electron transport complex protein RnfC [beta proteobacterium KB13] gi|207087758|gb|EDZ65041.1| electron transport complex protein RnfC [beta proteobacterium KB13] Length = 503 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 17/99 (17%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L + E + K C+ C C CP+ + Y Sbjct: 343 TKAMNCLLAITDEMKSKDTFEMPCIRCTKCVEVCPAQLQPQELYWH-------------- 388 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ + L + ++L+ C C+ CP + + Sbjct: 389 ---AKSKQFEKLTEDYKLFDCIECGCCSYVCPSNIPLVQ 424 >gi|332289788|ref|YP_004420640.1| electron transport complex protein RnfC [Gallibacterium anatis UMN179] gi|330432684|gb|AEC17743.1| electron transport complex protein RnfC [Gallibacterium anatis UMN179] Length = 816 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 32/107 (29%), Gaps = 28/107 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + Q C+ C+ CS CP Y W S D + E Sbjct: 369 EYQPPPQERNCIRCSACSDHCPIKLMPQQLY-----------WFARSEDHEKSE------ 411 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDRKI 259 + L C C CP + + IA++K L K+ Sbjct: 412 -QYNLKDCIECGVCAYVCPSNIPLIQYFRQEKAKIAELK---LKAKL 454 >gi|331085097|ref|ZP_08334183.1| hypothetical protein HMPREF0987_00486 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407880|gb|EGG87370.1| hypothetical protein HMPREF0987_00486 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 438 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + K + +L +D K C+ C C +CPS S Sbjct: 331 MMGFAMFSTEVPVTKTSSAILGFSKDEVKKHEPSACINCGRCVDACPSRIVPSRLADF-- 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DE + + LE C +C+ CP + +AI ++ + Sbjct: 389 ---------AERHDEESFLKWEGLE-------CVECGSCSYVCPAKRHLKQAIGSMRKIA 432 Query: 255 LDRK 258 L K Sbjct: 433 LANK 436 >gi|315444618|ref|YP_004077497.1| (4Fe-4S) cluster-containing protein [Mycobacterium sp. Spyr1] gi|315262921|gb|ADT99662.1| (4Fe-4S) cluster-containing protein [Mycobacterium sp. Spyr1] Length = 496 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 15/94 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 325 RCIRCSACLNVCPVYERAGGHSYGSVYPGPIGAV----LTPQLRGTASE------IDRSL 374 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CP ++ + ++ ++D Sbjct: 375 PYASSLCGACFDVCPVRIDIPSMLVHLRTRVVDE 408 >gi|182677554|ref|YP_001831700.1| hypothetical protein Bind_0559 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633437|gb|ACB94211.1| protein of unknown function DUF162 [Beijerinckia indica subsp. indica ATCC 9039] Length = 488 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 17/135 (12%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL + R + + ++ + ++ + C+ C C C Y Sbjct: 279 DLTQYTTFHCGPKRPGDRDGPEEFHIVLVDNGRTKMLGEGLEEMLRCLRCGACMNHCVVY 338 Query: 184 -----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y GP + ++D D+ L C NC CP Sbjct: 339 RQIGGHAYGGAYPGPMGSVITP--VLDGLDKAHD--LPEA--------CTLNGNCQAVCP 386 Query: 239 KGLNPAKAIAKIKMM 253 + + + Sbjct: 387 VDIPLPTLLRGWREK 401 >gi|145224285|ref|YP_001134963.1| iron-sulfur cluster binding protein [Mycobacterium gilvum PYR-GCK] gi|145216771|gb|ABP46175.1| iron-sulfur cluster binding protein [Mycobacterium gilvum PYR-GCK] Length = 496 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 15/94 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + R D Sbjct: 325 RCIRCSACLNVCPVYERAGGHSYGSVYPGPIGAV----LTPQLRGTASE------IDRSL 374 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CP ++ + ++ ++D Sbjct: 375 PYASSLCGACFDVCPVRIDIPSMLVHLRTRVVDE 408 >gi|148656260|ref|YP_001276465.1| hypothetical protein RoseRS_2134 [Roseiflexus sp. RS-1] gi|148568370|gb|ABQ90515.1| protein of unknown function DUF224, cysteine-rich region domain protein [Roseiflexus sp. RS-1] Length = 1024 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 10/134 (7%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL + + P P + Y C C C C + Sbjct: 466 DLASRFEPLARRFGNAAPVAIGERPTAPVRDIP----ADVAWYAYACSQCGYCIDECDQF 521 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + P R ++ R+++ + +D C T C C L Sbjct: 522 YGRGWESQSPRGKWYWLREYMEGREQWNQKMVDT------FLACTTCEMCNLRCSANLPI 575 Query: 244 AKAIAKIKMMLLDR 257 + K++ L++ Sbjct: 576 EPSWMKLRGQLINE 589 >gi|302829785|ref|XP_002946459.1| hypothetical protein VOLCADRAFT_103047 [Volvox carteri f. nagariensis] gi|300268205|gb|EFJ52386.1| hypothetical protein VOLCADRAFT_103047 [Volvox carteri f. nagariensis] Length = 1559 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 39/138 (28%), Gaps = 15/138 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 F ++ + P + L+ I C+ C C ++CPS D Sbjct: 1103 ELFDPKYTLNPGVILNRDPDAHIKFLKPSPAASPIVN--RCIECGFCESNCPSR----DI 1156 Query: 190 YLGPAILLQAYR---WLIDSRDEFQGERLDNLEDPFRLYR------CHTIMNCTQSCPKG 240 L P + YR L E L Y C C + CP Sbjct: 1157 TLTPRQRIAVYREMYRLKQLGPAASEEEKQQLAAITSSYAYDGEQTCAADGMCQEKCPVK 1216 Query: 241 LNPAKAIAKIKMMLLDRK 258 +N I ++ + Sbjct: 1217 INTGDMIKALRAEHMKEA 1234 >gi|225020154|ref|ZP_03709346.1| hypothetical protein CORMATOL_00153 [Corynebacterium matruchotii ATCC 33806] gi|224947119|gb|EEG28328.1| hypothetical protein CORMATOL_00153 [Corynebacterium matruchotii ATCC 33806] Length = 948 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 8/131 (6%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +VD+ +R + P + D + +CV C C CPS Sbjct: 511 MVDVKDACDPNRILNPGTIITDDPQLHLKYIKPTE-TVRDIIDDCVECGYCEPVCPSQHL 569 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + P + R + ERL E + C C +CP +N Sbjct: 570 TTT----PRQRIVIQRAIAACEASGAYDLAERLKAQEVYDVVQTCAVDGMCQTACPVNIN 625 Query: 243 PAKAIAKIKMM 253 I + Sbjct: 626 TGDLIRAKRRE 636 >gi|299136006|ref|ZP_07029190.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] gi|298602130|gb|EFI58284.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] Length = 969 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 30/115 (26%), Gaps = 7/115 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNS 187 Y H + + + + + CV C T CPSY Sbjct: 536 YQPHDYLRLNTSHAPIQTSTHFHFASDGGSFEQAALRCVGVGACRKEEAGTMCPSYMATK 595 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + ++ G R + + + L C C CP ++ Sbjct: 596 EEKHSTRGRAHLLWEMMQGDVVRDGWRSEEVREALGL--CLACKACKTECPVNVD 648 >gi|56460896|ref|YP_156177.1| electron transport complex protein RnfC [Idiomarina loihiensis L2TR] gi|56179906|gb|AAV82628.1| Predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Idiomarina loihiensis L2TR] Length = 556 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 22/93 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ + Q +WL ++D E L+ C Sbjct: 380 CIRCGACADACPA-----------TLQPQQLQWLAKAKDYESLE-------KHNLFDCIE 421 Query: 230 IMNCTQSCPKGLNPA----KAIAKIKMMLLDRK 258 C CP + KA A+++ + ++ Sbjct: 422 CGACAYVCPSEIPLVHYYRKAKAEVRNIAREKA 454 >gi|237738936|ref|ZP_04569417.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 2_1_31] gi|229423536|gb|EEO38583.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 2_1_31] Length = 435 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H + +D + + + + K LL + + C+ C Sbjct: 308 YILDHCGINRDEMERLVMGGPMMGLAQMTEEATVVKGTSGLLALTNEEMRPYKTKACISC 367 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D + L C +C Sbjct: 368 SKCVSACPMGLAP---------------LMFDRLAAAKE---YEAMAGHNLMDCIECGSC 409 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A+AI K L +K Sbjct: 410 AYICPANRPLAEAIKTGKAKLRAKK 434 >gi|223038941|ref|ZP_03609233.1| iron-sulfur cluster-binding domain protein [Campylobacter rectus RM3267] gi|222879914|gb|EEF15003.1| iron-sulfur cluster-binding domain protein [Campylobacter rectus RM3267] Length = 417 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + +CV C C C + NSD P L + + Sbjct: 2 FKFDEISDKCVKCGKCIQVCTIHHINSDETTSPRGFLDLMGAYERGELKLDKSAKNI--- 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C +C + CP L AI ++ + D+ Sbjct: 59 ---FESCFLCASCVEVCPNSLRVDTAIENVRRDIADK 92 >gi|120601877|ref|YP_966277.1| methyl-viologen-reducing hydrogenase subunit delta [Desulfovibrio vulgaris DP4] gi|120562106|gb|ABM27850.1| methyl-viologen-reducing hydrogenase, delta subunit [Desulfovibrio vulgaris DP4] Length = 494 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 4/91 (4%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C +CP W + + + + Sbjct: 373 FWRAQMERCLRCYACRNACPMCVCRDQCIGESRDPH----WTTQEGNVREKLQFQIIHAL 428 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RC C ++CP + + Sbjct: 429 HLAGRCTECGECQRACPVNIPVLALKQWMNR 459 >gi|307700575|ref|ZP_07637607.1| FAD binding domain protein [Mobiluncus mulieris FB024-16] gi|307614220|gb|EFN93457.1| FAD binding domain protein [Mobiluncus mulieris FB024-16] Length = 1080 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 21/129 (16%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS----- 179 ++VD R P +D+ + C C Sbjct: 528 VLVDPDPLDRHLRLASARDIAPDPSGF----AFPKDKDLTAAFHRCTGVGKCLAMSHIKG 583 Query: 180 ---CPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNC 233 CPSY +A + + + RD E L L+ C C Sbjct: 584 AWMCPSYLATGKEKDATRGRARALQEVTNGGLIRDFRDPELLRALD------LCLACKAC 637 Query: 234 TQSCPKGLN 242 + +CP G++ Sbjct: 638 SSACPTGID 646 >gi|306817794|ref|ZP_07451535.1| D-lactate dehydrogenase [Mobiluncus mulieris ATCC 35239] gi|304649443|gb|EFM46727.1| D-lactate dehydrogenase [Mobiluncus mulieris ATCC 35239] Length = 1125 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 21/129 (16%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS----- 179 ++VD R P +D+ + C C Sbjct: 566 VLVDPDPLDRHLRLASARDIAPDPSGF----AFPKDKDLTAAFHRCTGVGKCLAMSHIKG 621 Query: 180 ---CPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNC 233 CPSY +A + + + RD E L L+ C C Sbjct: 622 AWMCPSYLATGKEKDATRGRARALQEVTNGGLIRDFRDPELLRALD------LCLACKAC 675 Query: 234 TQSCPKGLN 242 + +CP G++ Sbjct: 676 SSACPTGID 684 >gi|227876849|ref|ZP_03994958.1| FAD linked oxidase [Mobiluncus mulieris ATCC 35243] gi|269977826|ref|ZP_06184783.1| D-lactate dehydrogenase [Mobiluncus mulieris 28-1] gi|227842746|gb|EEJ52946.1| FAD linked oxidase [Mobiluncus mulieris ATCC 35243] gi|269933996|gb|EEZ90573.1| D-lactate dehydrogenase [Mobiluncus mulieris 28-1] Length = 1087 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 21/129 (16%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS----- 179 ++VD R P +D+ + C C Sbjct: 528 VLVDPDPLDRHLRLASARDIAPDPSGF----AFPKDKDLTAAFHRCTGVGKCLAMSHIKG 583 Query: 180 ---CPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNC 233 CPSY +A + + + RD E L L+ C C Sbjct: 584 AWMCPSYLATGKEKDATRGRARALQEVTNGGLIRDFRDPELLRALD------LCLACKAC 637 Query: 234 TQSCPKGLN 242 + +CP G++ Sbjct: 638 SSACPTGID 646 >gi|299142139|ref|ZP_07035272.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella oris C735] gi|298576228|gb|EFI48101.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella oris C735] Length = 417 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +C+ C+ C+ CP R+ + D F Sbjct: 12 QHELEQCMKCSICTVYCPVSAVEPKYPGPKHAGPDLMRYRMKDADFFN----------EN 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ I + + Sbjct: 62 LKMCLNCKRCEVACPNGVKIGDIIQEAR 89 >gi|218666436|ref|YP_002426931.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518649|gb|ACK79235.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 239 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 15/107 (14%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKID----GLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 W ++P+ + + E+ + ++ C C C+ SC Y N D P Sbjct: 30 SWNTMITPRTLTDYEEHFEEIIQSYSGGENVHRCWQCGSCTNSCTMYAQNVD--FNPRYW 87 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + R + + + ++D +++C + CT CPK + P Sbjct: 88 IYLIRLGL---------KAELMKDKDIIWQCVSCNKCTNICPKDVRP 125 >gi|146342133|ref|YP_001207181.1| bifunctional protein [Bradyrhizobium sp. ORS278] gi|146194939|emb|CAL78964.1| putative bifunctional protein [includes D-lactate dehydrogenase (N-term) and Anaerobic glycerol-3-phosphate dehydrogenase subunit C (C-term)] [Bradyrhizobium sp. ORS278] Length = 984 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 50/170 (29%), Gaps = 16/170 (9%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G +A K++K V P V + D S F R + Sbjct: 501 GERIVADFKEVKQRFDPTNV-LNPGRIVDPPRMDDRSLF----RYAPDYRVDDIKPVLDW 555 Query: 154 LLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + C C CPSY D R I + Sbjct: 556 SAYPGAAGGFQGAVEMCNNNGACRKLDGGVMCPSYRATRDEKDVTRGRANTLRLAISGQL 615 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + + +L C + C + CP G++ +AK+K+ +L + Sbjct: 616 GPGALSSDEMMETLKL--CVSCKACRRECPTGVD----MAKMKIEVLAAR 659 >gi|57168322|ref|ZP_00367456.1| probable NADH2 dehydrogenase (ubiquinone) I chain G Cj1573c [Campylobacter coli RM2228] gi|57020130|gb|EAL56804.1| probable NADH2 dehydrogenase (ubiquinone) I chain G Cj1573c [Campylobacter coli RM2228] Length = 820 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + ++ K G+ C++C C T C S P Sbjct: 117 IQRHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDMLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|305432369|ref|ZP_07401531.1| NADH-quinone oxidoreductase subunit G [Campylobacter coli JV20] gi|304444408|gb|EFM37059.1| NADH-quinone oxidoreductase subunit G [Campylobacter coli JV20] Length = 820 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + ++ K G+ C++C C T C S P Sbjct: 117 IQRHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDMLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|241668384|ref|ZP_04755962.1| 4Fe-4S ferredoxin, FAD dependent [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876917|ref|ZP_05249627.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842938|gb|EET21352.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 940 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 15/141 (10%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y+ + I+ L + LL +D + +C+ C C + C Sbjct: 495 DQLYNVMQEIKLLLDPHNLFNPGVLLNDDKDVFVKNFKRRVKLDKQADKCLECGFCESVC 554 Query: 181 PSYWWNSDRYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 PS D L P L Y+ ++ D+ + + + + C C CP Sbjct: 555 PSR----DLSLTPRQRLSVYKEMMILKETDKAKYKDYKKKYQYYGIDTCAATGLCGVQCP 610 Query: 239 KGLNPAKAIAKIKMMLLDRKI 259 +N I ++ I Sbjct: 611 VEINTGSFIKDLRAEQNKANI 631 >gi|73539268|ref|YP_299635.1| Iron-sulfur cluster binding protein [Ralstonia eutropha JMP134] gi|72122605|gb|AAZ64791.1| Iron-sulfur cluster binding protein [Ralstonia eutropha JMP134] Length = 481 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 21/93 (22%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C CP Y Y GP + L + D L Sbjct: 317 QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLEATADLATASSL------ 370 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP + + + +++ Sbjct: 371 --------CGACGEVCPVRIPIPQLLVRLRTEA 395 >gi|325478991|gb|EGC82092.1| electron transport complex, RnfABCDGE type, C subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 441 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L D K + C+ C+ C + CP L +++ ++ R Sbjct: 348 EKASNCILVLASDEAKPLDVDPCIRCSRCVSVCPVELL----------PLYIHKFSLEER 397 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E E L+ ++ C +C+ CP +AI K + Sbjct: 398 FEKAQE-LNIMD-------CIECGSCSFVCPSNRPLVEAIKFGKRQIRQAG 440 >gi|291460867|ref|ZP_06025673.2| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium periodonticum ATCC 33693] gi|291380312|gb|EFE87830.1| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium periodonticum ATCC 33693] Length = 441 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H + +D + + + + K LL + + C+ C Sbjct: 314 YILDHCGINRDEMERLVMGGPMMGLAQMTEEATVVKGTSGLLALTNEEMRPYKTKACISC 373 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D + L C +C Sbjct: 374 SKCVSACPMGLAP---------------LMFDRLAAAKE---YEAMAGHNLMDCIECGSC 415 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A+AI K L +K Sbjct: 416 AYICPANRPLAEAIKTGKAKLRAKK 440 >gi|254669502|emb|CBA03421.1| probable iron-sulfur binding oxidase [Neisseria meningitidis alpha153] Length = 1119 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 654 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 713 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 714 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 746 >gi|319638298|ref|ZP_07993061.1| oxidoreductase [Neisseria mucosa C102] gi|317400571|gb|EFV81229.1| oxidoreductase [Neisseria mucosa C102] Length = 1277 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELTDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I+ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAIRNYLAD 904 >gi|255326701|ref|ZP_05367777.1| iron-sulfur cluster-binding protein [Rothia mucilaginosa ATCC 25296] gi|255295918|gb|EET75259.1| iron-sulfur cluster-binding protein [Rothia mucilaginosa ATCC 25296] Length = 542 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L Q ++ E+ Sbjct: 323 RQALRCIRCSACMNVCPVYERAGGHAYGSTYPGPIGAIL-----SPQLSGIEAAENNSLP 377 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C + CP +N + + ++ ++ K Sbjct: 378 YASSLCGACYEVCPVKINFPEVLVHLRAKDVESK 411 >gi|170717802|ref|YP_001784865.1| electron transporter subunit RnfC [Haemophilus somnus 2336] gi|168825931|gb|ACA31302.1| electron transport complex, RnfABCDGE type, C subunit [Haemophilus somnus 2336] Length = 706 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP + Y D + E + L C Sbjct: 381 CIRCSACSDACPVHLMPQQLYWFARAE-----------DHKKSE-------EYALKECIE 422 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 423 CGLCAYVCPSHIPL---IQYFRQE--KAKI 447 >gi|332560639|ref|ZP_08414957.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332274437|gb|EGJ19753.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 469 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 30/119 (25%), Gaps = 9/119 (7%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L FY + + C +CP Sbjct: 158 LTGGAWVFYFADAPTLLNGLVTLTAHPVAWITILVLTATTFVFAGFMREQICIYACPWPR 217 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + I + AYR D R E +G+R C M C CP G++ Sbjct: 218 IQAALMDEETITV-AYR---DWRGEPRGKR-----SETGRGDCIDCMACVNVCPMGIDI 267 >gi|261392650|emb|CAX50216.1| putative oxidoreductase [Neisseria meningitidis 8013] Length = 1277 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|260887421|ref|ZP_05898684.1| iron-sulfur cluster-binding protein [Selenomonas sputigena ATCC 35185] gi|330840068|ref|YP_004414648.1| protein of unknown function DUF224 cysteine-rich region domain protein [Selenomonas sputigena ATCC 35185] gi|260862828|gb|EEX77328.1| iron-sulfur cluster-binding protein [Selenomonas sputigena ATCC 35185] gi|329747832|gb|AEC01189.1| protein of unknown function DUF224 cysteine-rich region domain protein [Selenomonas sputigena ATCC 35185] Length = 444 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C CP Y + + + + + E + Sbjct: 22 ADIENAMANCMKCGNCQAVCPIYRETGKEQMVARGKISLMQGYLSGKIPISAEFDHIMA- 80 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C +CP G+ + I + + + + Sbjct: 81 -----MCLNCKSCAANCPCGVAADELILRGRNAAVKAR 113 >gi|238021422|ref|ZP_04601848.1| hypothetical protein GCWU000324_01322 [Kingella oralis ATCC 51147] gi|237868402|gb|EEP69408.1| hypothetical protein GCWU000324_01322 [Kingella oralis ATCC 51147] Length = 1274 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 29/218 (13%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +I + + RS I G G+ I L + Sbjct: 698 NIPVNSDDYEMLQTAHQAVARI---MDIARSLNGVISGEHGIGITKLEFLTDAEMQPFWD 754 Query: 109 GAIAVYPLPHMSVIK-----DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + P H + K DL + + ++ + ++ Sbjct: 755 YKAKIDPKGHFNRHKLMRGADLRNAYTPSFELLGFESLIMEQSHLGKITDAIK------- 807 Query: 164 IDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +C+ C C C ++ + ++ LG +L +A+ + +R + D Sbjct: 808 -----DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLAEAFLYEEQTRRGVSLKHFD 862 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L + C C + CP ++ I+ L Sbjct: 863 ELGNIG--DHCTVCHRCVKPCPVNIDFGDVTVDIRNFL 898 >gi|332296413|ref|YP_004438336.1| hypothetical protein Thena_1595 [Thermodesulfobium narugense DSM 14796] gi|332179516|gb|AEE15205.1| hypothetical protein Thena_1595 [Thermodesulfobium narugense DSM 14796] Length = 393 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 13/89 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C CA CS C + P + +W + D L ++ CH Sbjct: 26 KCYQCATCSVVC---NLAPNNSPFPRKEMVMAQWGM----------KDALLKDADIWLCH 72 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +CT CP+G P + ++ + ++ Sbjct: 73 QCADCTAYCPRGAKPGDVLGALRKITIEE 101 >gi|319410330|emb|CBY90675.1| putative oxidoreductase [Neisseria meningitidis WUE 2594] Length = 1277 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|320105609|ref|YP_004181199.1| formate dehydrogenase subunit alpha [Terriglobus saanensis SP1PR4] gi|319924130|gb|ADV81205.1| formate dehydrogenase, alpha subunit [Terriglobus saanensis SP1PR4] Length = 1021 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 54/183 (29%), Gaps = 30/183 (16%) Query: 72 PTLTL-RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV-------------YPLP 117 P + R+ C +C + ++G AC ++ ++V L Sbjct: 65 PQICYHRQMGPIETCDTCMVEVNGQLVRACSTEIAPEMRVLSVSHRADVAQREAMDRILQ 124 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE--DRQKIDGLYECVMCAC 175 + + + + + + H + +P + + +C++C Sbjct: 125 NHDLYCTVCDNNNGNCTIHNTTGEMSIQHQQRPFLHKPFEQDHSNPFYRYDPDQCILCGR 184 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +C + L + R L D ++ G C + +C Sbjct: 185 CVEACQDVQV--NETLTIRWEDEHPRVLWDGGEQIAGS------------SCVSCGHCIT 230 Query: 236 SCP 238 CP Sbjct: 231 VCP 233 >gi|302391154|ref|YP_003826974.1| Na-translocating NADH-quinone reductase subunit A [Acetohalobium arabaticum DSM 5501] gi|302203231|gb|ADL11909.1| Na-translocating NADH-quinone reductase subunit A [Acetohalobium arabaticum DSM 5501] Length = 472 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 17/99 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C +CP I R+ S + + R Sbjct: 387 DTNVHGEERACIFCGYCEDACPVDI----------IPHLVERYTAQSSVDEELIR----- 431 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C CT CP K I + K LL++ Sbjct: 432 --YGIFDCIECNLCTFVCPSKRPVGKHIKQGKQFLLNKG 468 >gi|284046264|ref|YP_003396604.1| iron-sulfur cluster binding protein [Conexibacter woesei DSM 14684] gi|283950485|gb|ADB53229.1| iron-sulfur cluster binding protein [Conexibacter woesei DSM 14684] Length = 479 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 41/169 (24%), Gaps = 18/169 (10%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G + + + V L+ S + W Sbjct: 226 NGRMCTTLPETLITVCGIEKLLPSWQDLEVFLQLLPRSSTAERMNPYTTLWAGAREDDGP 285 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +E D + D L + C+ C+ C CP Y G L Sbjct: 286 REFHLVLLDNGRTDSLADELARQTLACIRCSACLNVCPVYERTGGHAYGSVYPGPIGAIL 345 Query: 204 IDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + L + C + CP ++ + ++ Sbjct: 346 TPQLDGMRA--------AGSLPFASSLCGACYEVCPVKIDIPTVLVHLR 386 >gi|154502540|ref|ZP_02039600.1| hypothetical protein RUMGNA_00353 [Ruminococcus gnavus ATCC 29149] gi|153796936|gb|EDN79356.1| hypothetical protein RUMGNA_00353 [Ruminococcus gnavus ATCC 29149] Length = 438 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 35/124 (28%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 L K + +L +D C+ C C CPS S Sbjct: 331 MMGFAMVTLDAPVTKTSSSILAFQKDEAAEAKETACINCGRCVEVCPSRIIPSR------ 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L D + E + C +C+ CP N +AI ++ + Sbjct: 385 --------LADLSERHNEEGFVKMNGLE----CVECGSCSFVCPAKRNLKQAIGSMRKIA 432 Query: 255 LDRK 258 L K Sbjct: 433 LANK 436 >gi|85860883|ref|YP_463085.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85723974|gb|ABC78917.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] Length = 383 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 15/100 (15%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C C C + CP WN L++ + L ++E Sbjct: 15 KAHGGDAFKRCFQCGLCDSVCP---WNRVTTFSMRKLVREATFG-----------LTDIE 60 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++RC T C Q CP+ + ++ ++ + + + Sbjct: 61 SEE-MWRCTTCGRCPQVCPRDVKQIESGVALRRIATEYGV 99 >gi|218768087|ref|YP_002342599.1| putative oxidoreductase [Neisseria meningitidis Z2491] gi|121052095|emb|CAM08406.1| putative oxidoreductase [Neisseria meningitidis Z2491] Length = 1277 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|328555130|gb|AEB25622.1| lactate oxidase [Bacillus amyloliquefaciens TA208] Length = 476 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDEYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + ++++ Sbjct: 360 PYASSLCAACTEACPVKIPLHELLLKHRQNIVEK 393 >gi|308175159|ref|YP_003921864.1| lactate oxidase [Bacillus amyloliquefaciens DSM 7] gi|307608023|emb|CBI44394.1| lactate oxidase [Bacillus amyloliquefaciens DSM 7] gi|328913489|gb|AEB65085.1| lactate oxidase [Bacillus amyloliquefaciens LL3] Length = 476 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDEYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + ++++ Sbjct: 360 PYASSLCAACTEACPVKIPLHELLLKHRQNIVEK 393 >gi|259495208|sp|A7Z901|LUTB_BACA2 RecName: Full=Lactate utilization protein B Length = 476 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDEYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + ++++ Sbjct: 360 PYASSLCAACTEACPVKIPLHELLLKHRQNIVEK 393 >gi|225181280|ref|ZP_03734725.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168060|gb|EEG76866.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 342 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 26/113 (23%), Gaps = 21/113 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLI---------- 204 ED C+ C C+ CP+ Y + W Sbjct: 220 NMFEDGYWDKLYRRCIACGTCTFVCPTCHCFDVQEYPTGNRGERIRCWDACMFSDFTMMG 279 Query: 205 ---DSRDEFQGERLDNLEDP-------FRLYRCHTIMNCTQSCPKGLNPAKAI 247 + R + Y C C + CP L+ + I Sbjct: 280 HGHNPRPTQKERVRQRFMHKLNYFPHQHGDYACVGCGRCVRKCPVNLDILEVI 332 >gi|218885429|ref|YP_002434750.1| methyl-viologen-reducing hydrogenase subunit delta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756383|gb|ACL07282.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 501 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 4/91 (4%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C +CP W + + + + Sbjct: 380 FWRAQMDRCLRCYACRNACPMCVCRDHCIAESRDPH----WTTQEGNVREKLQFQVIHAL 435 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RC C ++CP + + Sbjct: 436 HLAGRCTECGECQRACPVNIPVLSLKQWMNR 466 >gi|154687547|ref|YP_001422708.1| YvfW [Bacillus amyloliquefaciens FZB42] gi|154353398|gb|ABS75477.1| YvfW [Bacillus amyloliquefaciens FZB42] Length = 474 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ DE++ Sbjct: 310 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDEYKEL---------- 357 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y CT++CP + + + K + ++++ Sbjct: 358 PYASSLCAACTEACPVKIPLHELLLKHRQNIVEK 391 >gi|159041424|ref|YP_001540676.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920259|gb|ABW01686.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldivirga maquilingensis IC-167] Length = 493 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 16/112 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL----QAYRWL-------IDSR-D 208 R + + C C C C + D P YR + +D D Sbjct: 81 RAFRNYMESCTHCGFCIDKCQMWLATRDPNNSPVGRADLIRNIYRRMRKLTFGLVDKLSD 140 Query: 209 EFQGERLDNLEDPFRLYR----CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E + +RL + D +++ C C CP G++ A+ I+ + ++ Sbjct: 141 EEELKRLMDSVDLDKIWTYYYQCTECRRCAYFCPFGIDQAEITRSIRQIFVE 192 >gi|161522844|ref|YP_001585773.1| hypothetical protein Bmul_5818 [Burkholderia multivorans ATCC 17616] gi|189348320|ref|YP_001941516.1| hypothetical protein BMULJ_05704 [Burkholderia multivorans ATCC 17616] gi|160346397|gb|ABX19481.1| protein of unknown function DUF162 [Burkholderia multivorans ATCC 17616] gi|189338458|dbj|BAG47526.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 457 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 45/160 (28%), Gaps = 23/160 (14%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K + + L ++ + SHF + E V Sbjct: 242 IPKLEHLGVFIRMLSRNAIGSPITQYTSHFRGPKKGGEMHFVLVDNG-----RSERLGMD 296 Query: 163 KIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +C+ C C +CP Y Y GP + + + + L Sbjct: 297 DFWYSLKCIRCGACMNTCPVYRRSSGLSYGGVYSGPIGAIINPTFNL-----RKYSSLPF 351 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +CT CP +N + I K + ++ ++ Sbjct: 352 ASTMNG--------SCTSVCPVKINIHEQIYKWRQIVAEQ 383 >gi|23016779|ref|ZP_00056531.1| COG3383: Uncharacterized anaerobic dehydrogenase [Magnetospirillum magnetotacticum MS-1] Length = 893 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 43/171 (25%), Gaps = 28/171 (16%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD------------LVVDM 129 EG C +C + I G L + + V V K + D+ Sbjct: 44 EGNCRACVVEIKGERVLVASCR-RLPTPGMVVES-RGERVEKSRRLVFELLLADHVSPDL 101 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + ++ L C+ CA C +C N Sbjct: 102 DSAFLGWAKAVGVEQSRFAPRTASCAPDTSHPAMAVRLDACIHCALCLRACRDVQVND-- 159 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G + R D DP C C Q+CP G Sbjct: 160 VIGMSGRGAHSRISFD------------FADPMGASSCVGCGECVQACPTG 198 >gi|313673309|ref|YP_004051420.1| hypothetical protein Calni_1349 [Calditerrivibrio nitroreducens DSM 19672] gi|312940065|gb|ADR19257.1| protein of unknown function DUF224 cysteine-rich region domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 414 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y + + + + + R E L +L+ C Sbjct: 17 QCMKCGTCQAHCPLYQKDLEESTVARGKIALIEAVFEGRVEKASSILKHLD------YCL 70 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G+ I +K + RKI Sbjct: 71 LCGRCKINCPSGVK-TDEI-FLKAKAILRKI 99 >gi|302342803|ref|YP_003807332.1| hypothetical protein Deba_1370 [Desulfarculus baarsii DSM 2075] gi|301639416|gb|ADK84738.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfarculus baarsii DSM 2075] Length = 383 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 20/110 (18%) Query: 161 RQKIDGLYECVMCACC-------STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + L+ C C C SCPSY P + R +D + + Sbjct: 1 MEYAEILHRCFRCGYCKLPSDYSDLSCPSYLKYRFETFSPGGRMWLLRGWLDGQLQ-TSP 59 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSC--PK---GLNPAKAIAKIKMMLLDRK 258 RL + +Y C NC + C PK + A + ++++ Sbjct: 60 RLQEI-----IYSCAACGNCVEHCNFPKFKDHI--LDAFIAARGLMVEEG 102 >gi|301063176|ref|ZP_07203728.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300442718|gb|EFK06931.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 440 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 10/96 (10%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L C C CS CP +++ + +D + + Sbjct: 20 KFDLNACFTCGTCSGGCPITGTPGMEGWDIRKVIRMLALGL----------VDEVVESKF 69 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP G++ + +K + ++ Sbjct: 70 PWVCTGCGRCAFGCPMGIDIPYIMLHMKHLRAREEV 105 >gi|283953814|ref|ZP_06371345.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 414] gi|283794855|gb|EFC33593.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 414] Length = 820 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPTNGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|163852036|ref|YP_001640079.1| hypothetical protein Mext_2616 [Methylobacterium extorquens PA1] gi|163663641|gb|ABY31008.1| protein of unknown function DUF162 [Methylobacterium extorquens PA1] Length = 524 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ H + ++ +C+ C C +CP Y + G Sbjct: 329 YTSHFRGPRPGTEMHMVLVDNGRSERLGMEEFWTSLKCIRCGACMNTCPVYRRSGGLSYG 388 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +ID F + L + +CT CP +N + I + Sbjct: 389 ATYSGPI-GLIIDP--TFNKRKYSTLP-----FSSTMNGSCTNVCPVKINIHEQIFAWRK 440 Query: 253 MLLDR 257 +L + Sbjct: 441 VLAEE 445 >gi|327479772|gb|AEA83082.1| electron transport complex protein RnfC [Pseudomonas stutzeri DSM 4166] Length = 827 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 22/100 (22%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E+ C+ C C+ +CP ++L Q + ++ E+L Sbjct: 359 FEELPPPPPALPCIRCGECAEACPV-----------SLLPQQLHFFALGQEH---EQLKA 404 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 L+ C C CP + + A A+I+ + Sbjct: 405 ----HHLFDCIECGACAYVCPSNIPLVQYYRAAKAEIREL 440 >gi|304558979|gb|ADM41643.1| Electron transport complex protein RnfC [Edwardsiella tarda FL6-60] Length = 773 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ C+ C C+ CP+ +L Q W ++ Sbjct: 359 NCILTPSRDEFSAPQAEQPCIRCGACADVCPA-----------RLLPQQLYWYSQGKEHD 407 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L C C CP + + Sbjct: 408 KAR-------DYHLQECIECGACAYVCPSNIPLVQ 435 >gi|269139047|ref|YP_003295748.1| electron transport complex protein [Edwardsiella tarda EIB202] gi|267984708|gb|ACY84537.1| electron transport complex protein [Edwardsiella tarda EIB202] Length = 767 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ C+ C C+ CP+ +L Q W ++ Sbjct: 359 NCILTPSRDEFSAPQAEQPCIRCGACADVCPA-----------RLLPQQLYWYSQGKEHD 407 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L C C CP + + Sbjct: 408 KAR-------DYHLQECIECGACAYVCPSNIPLVQ 435 >gi|237808208|ref|YP_002892648.1| electron transport complex, RnfABCDGE type, C subunit [Tolumonas auensis DSM 9187] gi|237500469|gb|ACQ93062.1| electron transport complex, RnfABCDGE type, C subunit [Tolumonas auensis DSM 9187] Length = 704 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 42/175 (24%), Gaps = 32/175 (18%) Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 G + ++ + ++ P P VI + M F H + T Sbjct: 306 FKKPGNAWVRLGSSVRWLLAQFSLIPEPRQRVI--MGGSMMGFTLPHADVPVVKITN--- 360 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L S + D C+ C+ C+ CP Y D Sbjct: 361 --CLLAPSVAELPPRDDEMNCIRCSKCAEVCPVKLLPQQLYWYSKAG-----------DH 407 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 E + L C C CP + I ++ Sbjct: 408 ENAE-------KYNLSDCIECGACAWVCPSNIPLVHYYRQEKAEIQHLREEAAQA 455 >gi|319943103|ref|ZP_08017386.1| cytochrome c oxidase accessory protein CcoG [Lautropia mirabilis ATCC 51599] gi|319743645|gb|EFV96049.1| cytochrome c oxidase accessory protein CcoG [Lautropia mirabilis ATCC 51599] Length = 504 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 27/109 (24%), Gaps = 3/109 (2%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P + + G + C+ CP + + +++ Sbjct: 207 PAQIIGMELGPWQWFWFLFYAFALWGNAGFLREQVCTYMCPYARFQGAMFDKDTMIITYD 266 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + D R L C C + CP G++ + Sbjct: 267 KERGDPRGSRSK---KADPSALGLGSCIDCGLCVEVCPTGIDIRDGLQY 312 >gi|307130991|ref|YP_003883007.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] gi|306528520|gb|ADM98450.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] Length = 739 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ +L Q W ++ + L+ C Sbjct: 378 CIRCGKCADACPA-----------GLLPQQLYWFSRGQEHEKAR-------QHHLFDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 420 CGACAYVCPSNIPLVQ 435 >gi|295400561|ref|ZP_06810539.1| iron-sulfur cluster binding protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977464|gb|EFG53064.1| iron-sulfur cluster binding protein [Geobacillus thermoglucosidasius C56-YS93] Length = 475 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++++R Sbjct: 364 SLCAACTEACPVKIPLHELLLKHRQVIVER 393 >gi|312112348|ref|YP_003990664.1| iron-sulfur cluster binding protein [Geobacillus sp. Y4.1MC1] gi|311217449|gb|ADP76053.1| iron-sulfur cluster binding protein [Geobacillus sp. Y4.1MC1] Length = 475 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++++R Sbjct: 364 SLCAACTEACPVKIPLHELLLKHRQVIVER 393 >gi|251789757|ref|YP_003004478.1| RnfABCDGE type electron transport complex subunit C [Dickeya zeae Ech1591] gi|247538378|gb|ACT06999.1| electron transport complex, RnfABCDGE type, C subunit [Dickeya zeae Ech1591] Length = 673 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ +L Q W ++ + L+ C Sbjct: 378 CIRCGKCADACPA-----------GLLPQQLYWFSRGQEHEKAR-------QHHLFDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 420 CGACAYVCPSNIPLVQ 435 >gi|239825954|ref|YP_002948578.1| iron-sulfur cluster binding protein [Geobacillus sp. WCH70] gi|259495064|sp|C5D586|LUTB_GEOSW RecName: Full=Lactate utilization protein B gi|239806247|gb|ACS23312.1| iron-sulfur cluster binding protein [Geobacillus sp. WCH70] Length = 475 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 312 QCIRCAACVNVCPVYRHIGGHSYGSIYSGPIGAVL--------SPLLGGYDDYKELPYAS 363 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + ++++R Sbjct: 364 SLCAACTEACPVKIPLHELLLKHRQVIVER 393 >gi|146281594|ref|YP_001171747.1| electron transport complex protein RnfC [Pseudomonas stutzeri A1501] gi|145569799|gb|ABP78905.1| electron transport complex protein rnfC [Pseudomonas stutzeri A1501] Length = 827 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 22/100 (22%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E+ C+ C C+ +CP ++L Q + ++ E+L Sbjct: 359 FEELPPPPPALPCIRCGECAEACPV-----------SLLPQQLHFFALGQEH---EQLKA 404 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMM 253 L+ C C CP + + A A+I+ + Sbjct: 405 ----HHLFDCIECGACAYVCPSNIPLVQYYRAAKAEIREL 440 >gi|46580806|ref|YP_011614.1| hydrogenase, iron-sulfur cluster-binding subunit [Desulfovibrio vulgaris str. Hildenborough] gi|46450226|gb|AAS96874.1| hydrogenase, iron-sulfur cluster-binding subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234512|gb|ADP87366.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfovibrio vulgaris RCH1] Length = 494 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 4/91 (4%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C +CP W + + + + Sbjct: 373 FWRGQMERCLRCYACRNACPMCVCRDQCIGESRDPH----WTTQEGNVREKLQFQIIHAL 428 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RC C ++CP + + Sbjct: 429 HLAGRCTECGECQRACPVNIPVLALKQWMNR 459 >gi|326384802|ref|ZP_08206478.1| oxidoreductase [Gordonia neofelifaecis NRRL B-59395] gi|326196464|gb|EGD53662.1| oxidoreductase [Gordonia neofelifaecis NRRL B-59395] Length = 974 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 12/100 (12%) Query: 164 IDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C T CPSY D + + L+ + Sbjct: 532 PHPAQACIGIGRCRTHAGGVMCPSYRATGDEKDSTRGRARVLQELVRG---GVAADWNAP 588 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C+ CP G++ +A +K L R+ Sbjct: 589 MVTESLDLCLACRACSSDCPTGVD----MAAMKSEALHRR 624 >gi|296314204|ref|ZP_06864145.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria polysaccharea ATCC 43768] gi|296839100|gb|EFH23038.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria polysaccharea ATCC 43768] Length = 1306 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|254673774|emb|CBA09466.1| probable iron-sulfur binding oxidase [Neisseria meningitidis alpha275] Length = 1306 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|327312688|ref|YP_004328125.1| glycerol-3-phosphate dehydrogenase, anaerobic subunit C [Prevotella denticola F0289] gi|326945093|gb|AEA20978.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella denticola F0289] Length = 417 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 12/88 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFR 223 + L +C+ C+ C+ CP Y GP S + + RL + Sbjct: 13 NNLEQCLKCSICTAYCPVSAVEP-AYPGPK----------HSGPDLERYRLKDSRFFDEA 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ A I + Sbjct: 62 LKMCLNCKRCEVACPSGVRIADIIQASR 89 >gi|294495275|ref|YP_003541768.1| FAD linked oxidase [Methanohalophilus mahii DSM 5219] gi|292666274|gb|ADE36123.1| FAD linked oxidase domain protein [Methanohalophilus mahii DSM 5219] Length = 1014 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 Y C C C C Y+ P + + RDE E Sbjct: 502 HAYTCAQCGYCVNECDQYYGRGWESQSPRGKWFFIKEYLAGRDEINQE------QTDTFL 555 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C C L + +++ L+ ++ Sbjct: 556 ACTTCELCDVRCQLDLPIENSWLRLRENLVQQR 588 >gi|289596659|ref|YP_003483355.1| protein of unknown function DUF162 [Aciduliprofundum boonei T469] gi|289534446|gb|ADD08793.1| protein of unknown function DUF162 [Aciduliprofundum boonei T469] Length = 426 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 15/99 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWW----NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C CP Y +Y+G + D F L+ Sbjct: 318 YNEALYCLRCGTCLYECPIYAVTAGFFGQQYMGGIGAIW---------DAFTTVGLEKA- 367 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C CP ++ IAK++ + Sbjct: 368 -SPIAYTCVRCGKCKVMCPLNIDIPDMIAKLRNDARKQG 405 >gi|281425098|ref|ZP_06256011.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ], C subunit [Prevotella oris F0302] gi|281400942|gb|EFB31773.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ], C subunit [Prevotella oris F0302] Length = 417 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 10/88 (11%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +C+ C+ C+ CP R+ + D F Sbjct: 12 QHELEQCMKCSICTVYCPVSAVEPKYPGPKHAGPDLMRYRMKDADFFN----------EN 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ I + + Sbjct: 62 LKMCLNCKRCEVACPNGVKIGDIIQEAR 89 >gi|226355367|ref|YP_002785107.1| NADH dehydrogenase (quinone) subunit I [Deinococcus deserti VCD115] gi|259514770|sp|C1D0H9|NUOI_DEIDV RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226317357|gb|ACO45353.1| putative NADH dehydrogenase (quinone), subunit I (NADH-quinone oxidoreductase, subunit I) [Deinococcus deserti VCD115] Length = 179 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + K + + + + + ++ + + KP R GL +C+ C+ C+ Sbjct: 4 LEIAKGMGLTLGKLFQKPVTVSYPEERATLKPRFRGRHVL-TRHPGTGLEKCIGCSLCAA 62 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDE-FQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+Y + D D GER + + L RC C ++C Sbjct: 63 ACPAYAIYVEAG------------ENDPHDPVSPGERYAKVYEINML-RCIFCGMCEEAC 109 Query: 238 PKG 240 P G Sbjct: 110 PTG 112 >gi|254502108|ref|ZP_05114259.1| formate dehydrogenase, alpha subunit [Labrenzia alexandrii DFL-11] gi|222438179|gb|EEE44858.1| formate dehydrogenase, alpha subunit [Labrenzia alexandrii DFL-11] Length = 922 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 61/198 (30%), Gaps = 35/198 (17%) Query: 81 REGICGSCGMNIDGTNTLACV--------------KDMKDIKGAIAVYPLPHMSVIKDLV 126 +G C +C ++I+G TLA + + L +D Sbjct: 45 SDGNCRACMVDIEGERTLAASCIRTPSEGMVVQTATERASKAREMVFELLASDQPSRDQH 104 Query: 127 VD-MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 D S F+ +I +P ++ Q L C+ C C +C Sbjct: 105 PDPQSDFFKWSDAIGVTSSRFAP--CEKPAQDVSHPAIAVNLDACIACNLCERACREVQV 162 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL---- 241 N +G A + D L DP L C C +CP G Sbjct: 163 ND--VIGMADRGSHTTPVFD------------LADPMGLSTCVACGECVSACPTGALMEK 208 Query: 242 NPAKAIAKIKMMLLDRKI 259 + A AK + + D+ I Sbjct: 209 SLLDADAKTREVYADKTI 226 >gi|218779473|ref|YP_002430791.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfatibacillum alkenivorans AK-01] gi|218760857|gb|ACL03323.1| Putative uncharacterized Fe-S oxidoreductase (contains MvhD and HdrD domains) [Desulfatibacillum alkenivorans AK-01] Length = 533 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 14/134 (10%) Query: 123 KDLVVDMSHFYSQHRSI--EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + L+ ++ F + +I P + P+ + ++ + +Y C C CS++C Sbjct: 117 QGLLDFLNDFVEEVAAIGKSPVQRPSKPEQPADSKAVIKEIIQKHDVYACQDCGKCSSAC 176 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L D + + ++ C T C CP Sbjct: 177 SLTLAGKQYSPRAMANAIIGGKLDDPQVQKD------------VWACLTCGICYDRCPSA 224 Query: 241 LNPAKAIAKIKMML 254 +N + I ++ +L Sbjct: 225 VNFPEFIRDVRAVL 238 >gi|224369141|ref|YP_002603305.1| GlcF2 [Desulfobacterium autotrophicum HRM2] gi|223691858|gb|ACN15141.1| GlcF2 [Desulfobacterium autotrophicum HRM2] Length = 435 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C C CP Y L + L D E C Sbjct: 19 KCAACGECRMVCPVYGVEGVERSVARGRLALAKALADGDLELTDRV------QSSFDNCL 72 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 M C ++C ++ + + K + + Sbjct: 73 LCMACVENCAGHVDMVEVVLKSRAYVA 99 >gi|156977574|ref|YP_001448480.1| oxidoreductase [Vibrio harveyi ATCC BAA-1116] gi|156529168|gb|ABU74253.1| hypothetical protein VIBHAR_06362 [Vibrio harveyi ATCC BAA-1116] Length = 1412 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RY 190 F Q +S + WL + + C+ C C +C + + Sbjct: 597 FSLQIKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNF 656 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A R L + D C C Q CP G Sbjct: 657 VCDKQGRPALRPDDRPHFGSNKNGLTLMGDS----NCVQCGACVQVCPTG 702 >gi|166031924|ref|ZP_02234753.1| hypothetical protein DORFOR_01625 [Dorea formicigenerans ATCC 27755] gi|166028377|gb|EDR47134.1| hypothetical protein DORFOR_01625 [Dorea formicigenerans ATCC 27755] Length = 439 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 27/102 (26%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +D C+ C C CPS R + ++ + Sbjct: 353 FTKDEVAQYEPTACINCGRCVEVCPS------------------RLIPSRLADYAEHHDE 394 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C+ CP +AI ++ L + Sbjct: 395 EAFTKHEGLECMECGSCSYVCPAKRQLKQAIGSMRKTALANR 436 >gi|219666771|ref|YP_002457206.1| hypothetical protein Dhaf_0706 [Desulfitobacterium hafniense DCB-2] gi|19421895|gb|AAL87783.1|AF403184_8 unknown [Desulfitobacterium hafniense DCB-2] gi|219537031|gb|ACL18770.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 414 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L C C C T+C +Y + +Q + + + + E Sbjct: 5 ADVYGMLSMCSKCGICQTACKTYKVDGAETKVTRGRIQLIKAVAEGKLEPDE------NY 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C +CP + + + + RK Sbjct: 59 EDAIMSCLLCGECAVACPSRVKGNELVLAARRDFKLRK 96 >gi|295395631|ref|ZP_06805823.1| iron-sulfur cluster-binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971447|gb|EFG47330.1| iron-sulfur cluster-binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 501 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 11/92 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLG---PAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C+ C CP Y G P + L+ +E + L Sbjct: 335 HGRQALHCIRCSACMNVCPVYERTGGHAYGSVYPGPIGAILSPLLTGVEEGENGSLP--- 391 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C +CP +N + + +++ Sbjct: 392 -----YASSLCGACYDACPVKINIPEMLVRLR 418 >gi|153870252|ref|ZP_01999690.1| heterodisulfide reductase subunit C [Beggiatoa sp. PS] gi|152073277|gb|EDN70305.1| heterodisulfide reductase subunit C [Beggiatoa sp. PS] Length = 204 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 13/82 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C CS SCP LGP + R + E L ++ C Sbjct: 27 MCMQCGVCSGSCP---------LGPHWAHPPQEIFMMIRAGKRDEVLQ----SDSMWMCT 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKI 250 + NC CP+ L + + Sbjct: 74 SCYNCIVRCPRELPITHIMHGL 95 >gi|153854921|ref|ZP_01996144.1| hypothetical protein DORLON_02150 [Dorea longicatena DSM 13814] gi|149752623|gb|EDM62554.1| hypothetical protein DORLON_02150 [Dorea longicatena DSM 13814] Length = 440 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L +D C+ C C +CPS R + Sbjct: 344 TKTSSSILGFTKDEVAKMEPSACINCGRCVEACPS------------------RLIPSRL 385 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ + C +C+ CP +AI ++ + L + Sbjct: 386 ADYAEHHDEEKFTKHEGLECMECGSCSFVCPAKRPLKQAIGSMRKIALANR 436 >gi|84516666|ref|ZP_01004025.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Loktanella vestfoldensis SKA53] gi|84509702|gb|EAQ06160.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Loktanella vestfoldensis SKA53] Length = 439 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFR 223 + C+ CP + + P L AYR W + R + + E Sbjct: 170 FVFGGFMREQVCNYMCP-WPRIQAAMMDPETLTVAYRDWRGEPRGKQRVE---------G 219 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 220 AGDCIDCMACVNVCPAGIDIRD 241 >gi|224824486|ref|ZP_03697593.1| cytochrome c oxidase accessory protein CcoG [Lutiella nitroferrum 2002] gi|224602979|gb|EEG09155.1| cytochrome c oxidase accessory protein CcoG [Lutiella nitroferrum 2002] Length = 483 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 9/86 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNL 218 + +Y+ P QA + D+ R E +G R L Sbjct: 208 FWMFFYGGFTYLFAGMMREQVCKYMCPYARFQAVMFDADTLIISYDEKRGEPRGARKKGL 267 Query: 219 E-DPFRLYRCHTIMNCTQSCPKGLNP 243 + L C C Q CP G++ Sbjct: 268 DPRSEGLGDCINCSICVQVCPVGIDI 293 >gi|119871694|ref|YP_929701.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673102|gb|ABL87358.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 534 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 12/162 (7%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 + K V L + DL + R I+ +L+ + ++E Sbjct: 41 PPLTTPKPEWEETYVTELDGY-IAIDLPWKPKTKEEEERLIQKFLEGLKKLTSRES-NWT 98 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG-PAILLQAYRWLID------SRDEFQ 211 + + L C C C+ +CP Y + + + P + R + + + + Sbjct: 99 FLQPLLLSLEYCAKCQNCAEACPIYIASGRKDIYRPTYRAEVLRRIYNKYIAKKPGGDIE 158 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAKI 250 + YRC C Q CP G++ A+ I K+ Sbjct: 159 LNIFTLMRLAELAYRCTLCRRCVQVCPLGIDNGLIAREIRKL 200 >gi|126667294|ref|ZP_01738267.1| Polyferredoxin [Marinobacter sp. ELB17] gi|126628239|gb|EAZ98863.1| Polyferredoxin [Marinobacter sp. ELB17] Length = 475 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP Y P + +Y D R E +G R + D L Sbjct: 218 AGWMREQVCLYMCP-YARFQSVMFDPNTRIVSY----DPNRGEPRGGRKKEAKPDEVGLG 272 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 273 DCIDCGQCVQVCPTGIDIRDGLQY 296 >gi|325860190|ref|ZP_08173315.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella denticola CRIS 18C-A] gi|325482277|gb|EGC85285.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella denticola CRIS 18C-A] Length = 417 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 12/88 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFR 223 + L +C+ C+ C+ CP Y GP S + + RL + Sbjct: 13 NNLEQCLKCSICTAYCPVSAVEP-AYPGPK----------HSGPDLERYRLKDSRFFDEA 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ A I + Sbjct: 62 LKMCLNCKRCEVACPSGVRIADIIQASR 89 >gi|257064355|ref|YP_003144027.1| predicted oxidoreductase of aldo/keto reductase family [Slackia heliotrinireducens DSM 20476] gi|256792008|gb|ACV22678.1| predicted oxidoreductase of aldo/keto reductase family [Slackia heliotrinireducens DSM 20476] Length = 370 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 47/164 (28%), Gaps = 16/164 (9%) Query: 87 SCGMNIDGTNTLACVKDMKD-IKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 + +N G+N ++ + L MS + + + + Sbjct: 216 ADVLNGSGSNMTPVEWALRFVWGLEGTITTLSGMS-------SLEQMRQNIATYQAFKPL 268 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + L+ + C C C CP + + + + ++ Sbjct: 269 TEAERST--LEKAQRALADAIAVPCTSCKYCMKECPMNINIAGIFD---AVNRGAQF--- 320 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D + N++ + C C +CP+ + + K Sbjct: 321 GNDRAKRTYKMNVQSYGKASDCIHCGQCEDACPQHIAVMDELEK 364 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 10/26 (38%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C + C + CP +N A + Sbjct: 291 CTSCKYCMKECPMNINIAGIFDAVNR 316 >gi|91226395|ref|ZP_01261194.1| putative formate dehydrogenase, alpha subunit [Vibrio alginolyticus 12G01] gi|91189209|gb|EAS75489.1| putative formate dehydrogenase, alpha subunit [Vibrio alginolyticus 12G01] Length = 1429 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RY 190 F Q +S + WL + + C+ C C +C + + Sbjct: 614 FSLQIKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNF 673 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A R L + D C C Q CP G Sbjct: 674 VCDKQGRPALRPDDRPHFGSNKNGLTLMGDS----NCVQCGACVQVCPTG 719 >gi|83855177|ref|ZP_00948707.1| formate dehydrogenase, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83843020|gb|EAP82187.1| formate dehydrogenase, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 922 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 47/190 (24%), Gaps = 37/190 (19%) Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACVK------------------DMKDIKGA 110 P L C +C + I+G LA + + + Sbjct: 34 PHLCFTPEPGYRPDGNCRACMVEIEGERVLAASCLREPSDGMVVTTNNARAENARKMVME 93 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P V D + I + LL L C Sbjct: 94 LLVTDQPAPEVAHD-KSSHLWDMAAMEGISESRFPKLEEGRIPLLDDSHVA-MRVNLDAC 151 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N +G A + D + DP C Sbjct: 152 IQCNLCVRACREVQVND--VIGMAGRGHDSYPVFD------------MADPMGASSCVAC 197 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 198 GECVQACPTG 207 >gi|149194335|ref|ZP_01871432.1| hypothetical protein CMTB2_07036 [Caminibacter mediatlanticus TB-2] gi|149135510|gb|EDM23989.1| hypothetical protein CMTB2_07036 [Caminibacter mediatlanticus TB-2] Length = 424 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C+ C C C + N D P L + + + + D +E Sbjct: 2 FKFSEISDMCIKCGKCIPECTIHRVNPDEATSPRGFLDILKGVEEGEIKIDKNFKDTVE- 60 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP L I + ++ + Sbjct: 61 -----SCFLCNQCVEVCPNSLPTDFMIENARNLVAKK 92 >gi|86740710|ref|YP_481110.1| FAD linked oxidase-like protein [Frankia sp. CcI3] gi|86567572|gb|ABD11381.1| FAD linked oxidase-like [Frankia sp. CcI3] Length = 955 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 8/138 (5%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D++ ++ + + P + + + G CV C C CPS Sbjct: 500 DVMTEVKRLFDPLGILNPGVVLSDDPRSYL-RNLKDVPTVGYGADMCVECGYCEPVCPSR 558 Query: 184 WWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L P + R +R DE + L + C C +CP Sbjct: 559 TLT----LTPRQRIALLREREAARREGDEGLADELSAAYRYDVVDTCAVDGMCQTACPVQ 614 Query: 241 LNPAKAIAKIKMMLLDRK 258 +N + +++ +++ Sbjct: 615 INTGSLVRELRAERVNKA 632 >gi|83941699|ref|ZP_00954161.1| formate dehydrogenase, alpha subunit [Sulfitobacter sp. EE-36] gi|83847519|gb|EAP85394.1| formate dehydrogenase, alpha subunit [Sulfitobacter sp. EE-36] Length = 922 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 47/190 (24%), Gaps = 37/190 (19%) Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACVK------------------DMKDIKGA 110 P L C +C + I+G LA + + + Sbjct: 34 PHLCFTPEPGYRPDGNCRACMVEIEGERVLAASCLREPSDGMVVTTNNARAENARKMVME 93 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P V D + I + LL L C Sbjct: 94 LLVTDQPAPEVAHD-KSSHLWDMAAMEGISESRFPKLEEGRIPLLDDSHVA-MRVNLDAC 151 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N +G A + D + DP C Sbjct: 152 IQCNLCVRACREVQVND--VIGMAGRGHDSYPVFD------------MADPMGASSCVAC 197 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 198 GECVQACPTG 207 >gi|317503686|ref|ZP_07961703.1| iron-sulfur cluster-binding protein [Prevotella salivae DSM 15606] gi|315665207|gb|EFV04857.1| iron-sulfur cluster-binding protein [Prevotella salivae DSM 15606] Length = 457 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 18/129 (13%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + + Q R + +LL + + +C+ C C +CP Y + Sbjct: 267 FTSHFRQARPGGEMHVVLVDNGRSKLLANPD----HWETLKCIRCGACMNTCPVYRRSGG 322 Query: 189 R---YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 Y+ P + + + + ++ + C ++C CP + P Sbjct: 323 HSYTYVIPGPIGVNLGMMHNPK-----------QNYGDVSACSLCLSCDNICPAEVAPGS 371 Query: 246 AIAKIKMML 254 I + L Sbjct: 372 QIYVWRQSL 380 >gi|311069931|ref|YP_003974854.1| putative iron-sulfur oxidoreductase [Bacillus atrophaeus 1942] gi|310870448|gb|ADP33923.1| putative iron-sulfur oxidoreductase [Bacillus atrophaeus 1942] Length = 481 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ D+F+ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDFKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+++CP + + + K + ++++ Sbjct: 360 PYASTLCAACSEACPVKIPLHELLLKHRQNIVEK 393 >gi|296330380|ref|ZP_06872861.1| putative iron-sulfur oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676015|ref|YP_003867687.1| putative iron-sulfur oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152648|gb|EFG93516.1| putative iron-sulfur oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414259|gb|ADM39378.1| putative iron-sulfur oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 479 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ D+F+ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDFKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+++CP + + + K + ++++ Sbjct: 360 PYASTLCAACSEACPVKIPLHELLLKHRQNIVEK 393 >gi|260886263|ref|ZP_05897526.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ], anaerobic, C subunit [Selenomonas sputigena ATCC 35185] gi|330839751|ref|YP_004414331.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Selenomonas sputigena ATCC 35185] gi|260863982|gb|EEX78482.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ], anaerobic, C subunit [Selenomonas sputigena ATCC 35185] gi|329747515|gb|AEC00872.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Selenomonas sputigena ATCC 35185] Length = 408 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 11/83 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D C+ C CC +CP + GP + A SR +F + ++ Sbjct: 12 PDTADHCIACTCCIANCPVTEAT-RAFAGPKLTGPA-----HSRMKFAEDDVER-----S 60 Query: 224 LYRCHTIMNCTQSCPKGLNPAKA 246 L C NC +CP G+ A Sbjct: 61 LEYCSNCKNCEITCPSGVRVATL 83 >gi|224540479|ref|ZP_03681018.1| hypothetical protein BACCELL_05392 [Bacteroides cellulosilyticus DSM 14838] gi|224517921|gb|EEF87026.1| hypothetical protein BACCELL_05392 [Bacteroides cellulosilyticus DSM 14838] Length = 184 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 10/100 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + + + C C C+ C ++ P L L+ +R Sbjct: 6 CISYGLEHEAGVIISRCYQCGKCTAGC----VLAEEMDFPPSFLV---RLLQTRTPENDN 58 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + ++ C NC CPK ++ K + ++ Sbjct: 59 R---VLGSNAIWICLNCENCIARCPKEIDIPKIMDYLREQ 95 >gi|220905360|ref|YP_002480672.1| heterodisulfide reductase subunit C [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869659|gb|ACL49994.1| heterodisulfide reductase, C subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 193 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C C C+ CP+ + + +++A + + RDE R Sbjct: 20 EALSGQNVSTCYQCGNCTAGCPAGLVYDRQ---VSQIMRAVQLGL--RDEVLNSR----- 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C+ CP ++ A + ++ M Sbjct: 70 ---SIWMCLSCSTCSLRCPNNIDVAGIMETLRHMARKEG 105 >gi|197119299|ref|YP_002139726.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197088659|gb|ACH39930.1| iron-sulfur cluster-binding oxidoreductase, putative [Geobacter bemidjiensis Bem] Length = 412 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 17/97 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C C +L + D D R Sbjct: 15 CQTNIMGCTNCGKCVREC--------AFLRKYGTPKKIAAEFDPADSMSLHR-------- 58 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C+ C+ CP+ LN +++ +DR + Sbjct: 59 -AFECNLCGLCSAVCPEKLNVDGMFLEMRREAVDRDL 94 >gi|125624698|ref|YP_001033181.1| putative electron transport protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493506|emb|CAL98485.1| putative electron transport protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071493|gb|ADJ60893.1| iron-sulfur cluster binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 490 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 19/92 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + L E Sbjct: 313 QCIRCGACLNVCPVYRQIGGHAYGSIYPGPIGSVL-------------SPVLGGYEQYGD 359 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Y CT++CP ++ + + + + ++ Sbjct: 360 LPYASTLCGACTETCPVKISLHELLIEHRKVM 391 >gi|91778921|ref|YP_554129.1| putative electron transport protein [Burkholderia xenovorans LB400] gi|91691581|gb|ABE34779.1| Putative electron transport protein [Burkholderia xenovorans LB400] Length = 464 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 13/149 (8%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K + + L ++ + SHF + + E V + Sbjct: 244 IPKVSDLGVFIRMLSRSALGSPITQYTSHFRAPRKGTEMHFILVD-----HGRSERLAME 298 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C +CP Y + G + F +R L Sbjct: 299 DFWYSLKCIRCGACMNTCPVYRRSGGLSYGGTYSGPIGAIIN---PTFDLKRYSALP--- 352 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +CT CP +N + I K + Sbjct: 353 --FASTLNGSCTNVCPVKINIHEQIYKWR 379 >gi|327327813|gb|EGE69589.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Propionibacterium acnes HL103PA1] Length = 947 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEELATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|314923226|gb|EFS87057.1| FAD linked oxidase protein [Propionibacterium acnes HL001PA1] Length = 947 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEELATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|308274770|emb|CBX31369.1| hypothetical protein N47_E48810 [uncultured Desulfobacterium sp.] Length = 243 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 13/114 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 E +K K + + + + L C+ C CS+ CP+ P L Sbjct: 1 MAEEAIKLGGKKKSMFIDKVKAILPEGGNLNLCLTCGACSSGCPATGLEGMD---PRKFL 57 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +D D + + C C CP ++ + + + Sbjct: 58 RMAALGLD----------DEILKSDWPWMCTMCQRCIYVCPMKIDIPQLVYNAR 101 >gi|296119506|ref|ZP_06838064.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295967389|gb|EFG80656.1| oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 960 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 25/208 (12%) Query: 67 KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLV 126 N D + + I +G L+ D + + ++ Sbjct: 439 ANGYDDAVIFGHAKDGNIHFLLTDRFEGEKNLSRYNKFTDDMVDLVLDAEGNLKAEHGTG 498 Query: 127 VDMSHFYSQ------HRSIEPWLKTVSPKPAKELLQSHEDRQKID------------GLY 168 M+ F + + ++ K + P+ ++ + Sbjct: 499 RAMAPFVRRQYGDELYEVMQELKKAIDPRGILNPGVILDEDPTAHISNVKLNPTVEAEID 558 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILL---QAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C CPS D L P + +A D LD + Sbjct: 559 PCVECGYCEPVCPS----KDLTLTPRQRIVVRRARAKAEQEGDTATVAELDKDYEYMGKQ 614 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C ++CP ++ K I +++ Sbjct: 615 TCAVDSLCVRACPVDIDTGKFIKQLRRE 642 >gi|282854240|ref|ZP_06263577.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes J139] gi|282583693|gb|EFB89073.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes J139] gi|314966993|gb|EFT11092.1| FAD linked oxidase protein [Propionibacterium acnes HL082PA2] gi|314980949|gb|EFT25043.1| FAD linked oxidase protein [Propionibacterium acnes HL110PA3] gi|315091680|gb|EFT63656.1| FAD linked oxidase protein [Propionibacterium acnes HL110PA4] gi|315093086|gb|EFT65062.1| FAD linked oxidase protein [Propionibacterium acnes HL060PA1] gi|315103140|gb|EFT75116.1| FAD linked oxidase protein [Propionibacterium acnes HL050PA2] Length = 947 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEELATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|120601395|ref|YP_965795.1| hypothetical protein Dvul_0345 [Desulfovibrio vulgaris DP4] gi|120561624|gb|ABM27368.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfovibrio vulgaris DP4] gi|311235087|gb|ADP87941.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio vulgaris RCH1] Length = 431 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 14/92 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + + DP Sbjct: 15 DDHMVACMKCGMCQAVCPVFAETMKEADVTRGKIALLENLA----------KEMVSDPEG 64 Query: 224 LY----RCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +C +C +CP G+ + + Sbjct: 65 VQEKLNKCLLCGSCGANCPSGVKIMDIFLRAR 96 >gi|118580953|ref|YP_902203.1| hypothetical protein Ppro_2541 [Pelobacter propionicus DSM 2379] gi|118503663|gb|ABL00146.1| protein of unknown function DUF224, cysteine-rich region domain protein [Pelobacter propionicus DSM 2379] Length = 446 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +C+ C C CP Y + + ++ LD+ + Sbjct: 23 RQELDKCMKCGNCMAVCPVYSIDKVESAVTRSKIAVADAVL-----TGELSLDDPQVYHM 77 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ C +C +CP +N + + ++ L+ + Sbjct: 78 VFNCLVCKSCMTNCPTKVNFDRIVLALRAALVRK 111 >gi|325578317|ref|ZP_08148452.1| electron transport complex protein RnfC [Haemophilus parainfluenzae ATCC 33392] gi|325160053|gb|EGC72182.1| electron transport complex protein RnfC [Haemophilus parainfluenzae ATCC 33392] Length = 778 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSACSDACPVNLMPQQLY-----------WYARSEDHQKSE-------EYCLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGVCAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|323141584|ref|ZP_08076467.1| hypothetical protein HMPREF9443_01246 [Phascolarctobacterium sp. YIT 12067] gi|322413926|gb|EFY04762.1| hypothetical protein HMPREF9443_01246 [Phascolarctobacterium sp. YIT 12067] Length = 129 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + C+ C CS +C + L +R + D + E L+ Sbjct: 14 RLAATDVRRCMQCGRCSANCEAASKMD---------LLPHRVVWDLNSGYASELLEA--- 61 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++C + M C + CP+G++PA+ + ++++ + ++ Sbjct: 62 -DAPWQCLSCMACEERCPRGVSPARIMEALRLLQIRQQ 98 >gi|301156225|emb|CBW15696.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Haemophilus parainfluenzae T3T1] Length = 776 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP Y W S D + E + L C Sbjct: 378 CIRCSACSDACPVNLMPQQLY-----------WYARSEDHQKSE-------EYCLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGVCAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|3171163|gb|AAC18358.1| putative iron-binding protein [Lactococcus lactis subsp. cremoris MG1363] Length = 368 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 19/92 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP Y Y GP + L E Sbjct: 191 QCIRCGACLNVCPVYRQIGGHAYGSIYPGPIGSVL-------------SPVLGGYEQYGD 237 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Y CT++CP ++ + + + + ++ Sbjct: 238 LPYASTLCGACTETCPVKISLHELLIEHRKVM 269 >gi|333025837|ref|ZP_08453901.1| putative iron-sulfur protein [Streptomyces sp. Tu6071] gi|332745689|gb|EGJ76130.1| putative iron-sulfur protein [Streptomyces sp. Tu6071] Length = 899 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 12/90 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + D + + +L Sbjct: 652 HCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLA--GMDAAKDDPNASLPYASS 709 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C +CP ++ + +++ Sbjct: 710 L-----CGACFDACPVKIDIPSLLVELRHQ 734 >gi|318062621|ref|ZP_07981342.1| putative iron-sulfur protein [Streptomyces sp. SA3_actG] gi|318079026|ref|ZP_07986358.1| putative iron-sulfur protein [Streptomyces sp. SA3_actF] Length = 563 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 12/90 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + D + + +L Sbjct: 330 HCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLA--GMDAAKDDPNASLPYASS 387 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C +CP ++ + +++ Sbjct: 388 L-----CGACFDACPVKIDIPSLLVELRHQ 412 >gi|295837855|ref|ZP_06824788.1| iron-sulfur cluster-binding protein [Streptomyces sp. SPB74] gi|295826703|gb|EFG64987.1| iron-sulfur cluster-binding protein [Streptomyces sp. SPB74] Length = 542 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 12/90 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + D + + +L Sbjct: 330 HCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLA--GMDAAKDDPNASLPYASS 387 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C +CP ++ + +++ Sbjct: 388 L-----CGACFDACPVKIDIPSLLVELRHQ 412 >gi|302520418|ref|ZP_07272760.1| iron-sulfur cluster-binding protein [Streptomyces sp. SPB78] gi|302429313|gb|EFL01129.1| iron-sulfur cluster-binding protein [Streptomyces sp. SPB78] Length = 563 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 12/90 (13%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + D + + +L Sbjct: 330 HCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLA--GMDAAKDDPNASLPYASS 387 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C +CP ++ + +++ Sbjct: 388 L-----CGACFDACPVKIDIPSLLVELRHQ 412 >gi|134298558|ref|YP_001112054.1| hypothetical protein Dred_0690 [Desulfotomaculum reducens MI-1] gi|134051258|gb|ABO49229.1| protein of unknown function DUF162 [Desulfotomaculum reducens MI-1] Length = 714 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 29/108 (26%), Gaps = 9/108 (8%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + +C+ CA C CP + G Sbjct: 295 MDNGRTEMRNDPMFKQALQCIRCASCLNVCPVFQQVGGHVYGHVYTG--------GIGTI 346 Query: 211 QGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L++ E L C C CP ++ IA+++ + + Sbjct: 347 LTAFLNSFEKAGELQNLCLRCERCKTYCPGKIDLPGLIAELRRRTVKK 394 >gi|226360754|ref|YP_002778532.1| FAD-linked oxidase [Rhodococcus opacus B4] gi|226239239|dbj|BAH49587.1| putative FAD-linked oxidase [Rhodococcus opacus B4] Length = 968 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 8/88 (9%) Query: 161 RQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGER 214 + + C+ C S CPS+ D +A + + +S G R Sbjct: 553 APFVHAVQGCIGVGRCRASTGGVMCPSFRATGDEKDSTRGRARALQEMVRNSPTVADGWR 612 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +++ L C + C+ CP G++ Sbjct: 613 SEDV--KESLDLCLSCKACSTDCPVGVD 638 >gi|111018641|ref|YP_701613.1| FAD binding oxidoreductase [Rhodococcus jostii RHA1] gi|110818171|gb|ABG93455.1| probable FAD binding oxidoreductase [Rhodococcus jostii RHA1] Length = 969 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 8/88 (9%) Query: 161 RQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGER 214 + + C+ C S CPS+ D +A + + +S G R Sbjct: 554 APFVHAVQGCIGVGRCRASTGGVMCPSFRATGDEKDSTRGRARALQEMVRNSPTVADGWR 613 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +++ L C + C+ CP G++ Sbjct: 614 SEDV--KESLDLCLSCKACSTDCPVGVD 639 >gi|71906356|ref|YP_283943.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dechloromonas aromatica RCB] gi|71845977|gb|AAZ45473.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Dechloromonas aromatica RCB] Length = 472 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 9/93 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQ 211 D + + C +Y+ P Q + D+ R E + Sbjct: 191 DFSGWELFWTLFYAGFCYMQAGFLREQVCKYMCPYARFQGVMFDPDTLVITYDPERGEPR 250 Query: 212 GERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNP 243 G R ++ C C CP G++ Sbjct: 251 GARKKGVDAKAAGAGDCVDCGLCVAVCPTGIDI 283 >gi|269959878|ref|ZP_06174255.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835177|gb|EEZ89259.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 1451 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRY 190 F Q +S + WL + + C+ C C +C + + Sbjct: 636 FSLQIKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNF 695 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A R L + D C C Q CP G Sbjct: 696 VCDKQGRPALRPDDRPHFGSNKNGLTLMGDS----NCVQCGACVQVCPTG 741 >gi|302879567|ref|YP_003848131.1| electron transport complex, RnfABCDGE type, C subunit [Gallionella capsiferriformans ES-2] gi|302582356|gb|ADL56367.1| electron transport complex, RnfABCDGE type, C subunit [Gallionella capsiferriformans ES-2] Length = 555 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 18/80 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ CPS + Y + + LD ED L+ Sbjct: 365 PALPCIRCTRCAEVCPSELQPQELYWF-----------------SKAKNLDKAEDYH-LF 406 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C+ CP + + Sbjct: 407 DCIECGACSYVCPSNIPLVQ 426 >gi|237749859|ref|ZP_04580339.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229374609|gb|EEO25000.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 487 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 26/98 (26%), Gaps = 9/98 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C C CP Y YL + NL Sbjct: 308 PHFHKALSCIRCGTCLNHCPVYDKIGGHSYLVTYPGPIGEVISPQIFGLNNCGYMTNL-- 365 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C++ CP + A+ I ++ + + Sbjct: 366 ------CSLCGRCSEKCPVKIPLAELIRDLRSERVGQG 397 >gi|258405255|ref|YP_003197997.1| FAD linked oxidase domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797482|gb|ACV68419.1| FAD linked oxidase domain protein [Desulfohalobium retbaense DSM 5692] Length = 1197 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 42/168 (25%), Gaps = 21/168 (12%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + I + P M + + F + I+ + L Sbjct: 667 ALKAYKRQIDPKNTINPGKLMQNRLETIPYTFSFNRLIQDIDKTALPQKERLIPLLRNIQ 726 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ--------AYRWLIDSRDEF 210 C C C CP ++ P Y L+D+ E Sbjct: 727 ----------TCTRCGKCKQVCPMFYPEKGFLYHPRSKNITLGALIEALYYSLMDT-GEP 775 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + +L C C CP + ++ L ++ Sbjct: 776 DPDLMQDLRQLME--HCTACGKCMTVCPVKIRSHDVALNMRSFLEEKG 821 >gi|212704666|ref|ZP_03312794.1| hypothetical protein DESPIG_02729 [Desulfovibrio piger ATCC 29098] gi|212671900|gb|EEB32383.1| hypothetical protein DESPIG_02729 [Desulfovibrio piger ATCC 29098] Length = 194 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + Q + C C CS CP+ ++ Q R + D + Sbjct: 20 EAQSGQNVSTCYQCGNCSAGCPA------GFVYDLQANQIMRGVQLGL-------KDQVL 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C + C+ CP ++ A+ + ++ M Sbjct: 67 NSRSIWMCLSCSTCSLRCPNNIDVAEVMETLRHMARKEG 105 >gi|171184816|ref|YP_001793735.1| hypothetical protein Tneu_0339 [Thermoproteus neutrophilus V24Sta] gi|170934028|gb|ACB39289.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermoproteus neutrophilus V24Sta] Length = 534 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 12/162 (7%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 + K V L + DL + R I+ +L+ + ++E Sbjct: 41 PPLTTPKPEWEETYVTELDGY-IAIDLPWKPKTKEEEERLIQKFLEGLKKLTSRES-NWT 98 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG-PAILLQAYRWLID------SRDEFQ 211 + + L C C C+ +CP Y + + + P + R + + + + Sbjct: 99 FLQPLLLSLEYCAKCQNCAEACPIYIASGRKDIYRPTYRAEVLRRIYNKYIAKKPGGDIE 158 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAKI 250 + YRC C Q CP G++ A+ I K+ Sbjct: 159 LNIFTLMRLAELAYRCTLCRRCVQVCPLGIDNGLIAREIRKL 200 >gi|46581431|ref|YP_012239.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450853|gb|AAS97499.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] Length = 422 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 14/92 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + + DP Sbjct: 6 DDHMVACMKCGMCQAVCPVFAETMKEADVTRGKIALLENLA----------KEMVSDPEG 55 Query: 224 LY----RCHTIMNCTQSCPKGLNPAKAIAKIK 251 + +C +C +CP G+ + + Sbjct: 56 VQEKLNKCLLCGSCGANCPSGVKIMDIFLRAR 87 >gi|146303395|ref|YP_001190711.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701645|gb|ABP94787.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 752 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 20/126 (15%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + I+ + K K ++ + + +CV C C SC +Y D Sbjct: 274 PNLQSYSEIQKVILNKFDKDVKIPKHANPIKAEYLEALKCVNCGQCLDSCLAYRTTQDYL 333 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP---AKAI 247 P RL C M C ++CP G+N + + Sbjct: 334 RSPPGKFS---------------RL--FTGETNFEACFGCMECQEACPVGVNISSVTEVL 376 Query: 248 AKIKMM 253 K++ Sbjct: 377 PKLREK 382 >gi|269966134|ref|ZP_06180224.1| putative formate dehydrogenase, alpha subunit [Vibrio alginolyticus 40B] gi|269829281|gb|EEZ83525.1| putative formate dehydrogenase, alpha subunit [Vibrio alginolyticus 40B] Length = 1451 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRY 190 F Q +S + WL + + C+ C C +C + + Sbjct: 636 FSLQIKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNF 695 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A R L + D C C Q CP G Sbjct: 696 VCDKQGRPALRPDDRPHFGSNKNGLTLMGDS----NCVQCGACVQVCPTG 741 >gi|261365636|ref|ZP_05978519.1| cytochrome c oxidase accessory protein CcoG [Neisseria mucosa ATCC 25996] gi|288565876|gb|EFC87436.1| cytochrome c oxidase accessory protein CcoG [Neisseria mucosa ATCC 25996] Length = 506 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 + C CP Y L+ +Y R E +G R + Sbjct: 235 FFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDAE---RGEPRGARKKTVNKEESG 290 Query: 224 LYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 291 LGDCINCAMCVQVCPVGIDI 310 >gi|313681400|ref|YP_004059138.1| NADH dehydrogenase subunit g [Sulfuricurvum kujiense DSM 16994] gi|313154260|gb|ADR32938.1| NADH dehydrogenase subunit G [Sulfuricurvum kujiense DSM 16994] Length = 828 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 52/201 (25%), Gaps = 44/201 (21%) Query: 72 PTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP---------LPHMS 120 P + R S C C + DG AC K+ P + Sbjct: 33 PAICYLTRCSPTLA-CRICLVEADGKQVYACNAKAKEGMEITTTTPNILEERRAIMEVYD 91 Query: 121 VIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACC 176 V L V D S K+ + +D C+MC C Sbjct: 92 VNHPLECGVCDQSGECELQNYTLEVGVDSQNYAIKDTHKPAQDWGLIHYDPALCIMCERC 151 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYR--------- 226 T C +G A L R D GE + +D + ++ Sbjct: 152 ITVCK-------DMIGDAALSTVAR----GSDAIHGEYKAMMPKDAYAMWNKLNKSLIAP 200 Query: 227 -------CHTIMNCTQSCPKG 240 C CT CP G Sbjct: 201 NGGDTLDCTNCGECTSVCPVG 221 >gi|167629681|ref|YP_001680180.1| anaerobic glycerol-3-phosphate dehydrogenase subunit c [Heliobacterium modesticaldum Ice1] gi|167592421|gb|ABZ84169.1| anaerobic glycerol-3-phosphate dehydrogenase subunit c [Heliobacterium modesticaldum Ice1] Length = 398 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 12/98 (12%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-AYRWLIDSRDEFQGERLDN 217 + + L C+ C C +CP D+Y GP R+ +D + Sbjct: 1 MSQDRHLILDNCIKCNICVANCPVVKVT-DQYAGPKQNGPDLERFRLD----------EP 49 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C C CP G+N A K K + Sbjct: 50 AAVHPSIGYCSNCKTCDFVCPSGVNVATMNCKAKGEYV 87 >gi|86152337|ref|ZP_01070548.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124984|ref|YP_004066988.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840826|gb|EAQ58077.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018706|gb|ADT66799.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 820 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMIVESDLQNLWDERNDIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|283457386|ref|YP_003361962.1| hypothetical protein RMDY18_03100 [Rothia mucilaginosa DY-18] gi|283133377|dbj|BAI64142.1| uncharacterized conserved protein containing a ferredoxin-like domain [Rothia mucilaginosa DY-18] Length = 545 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 44/173 (25%), Gaps = 14/173 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + L+ S + W Sbjct: 242 NGRMCLTLPDTLITFMGIEKILPTFQDYEAFLQLLPRSSTGERMNPYTSMWTGVTPGDGP 301 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + D + L C+ C+ C CP Y G L Sbjct: 302 QNMHVILIDNGRTAVLADELGRQALRCIRCSACMNVCPVYERAGGHAYGSTYPGPIGAIL 361 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Q ++ E+ Y C + CP +N + + ++ ++ Sbjct: 362 -----SPQLSGIEAAENSSLPYASSLCGACYEVCPVKINFPEVLVHLRAKDVE 409 >gi|315428051|dbj|BAJ49639.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 694 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 17/109 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDE 209 S D C+ C C CP+Y Y GP + + ++ Sbjct: 286 RSSMRDDPVFREALYCIRCGACMNICPTYSSLGGHVFGHIYTGPIGIPWTA--FVHGLEK 343 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + C + CP ++ IA++K + + Sbjct: 344 AAE--FAPL--------CISCGLCKEICPTIIDMPYMIAEVKHRYVQKG 382 >gi|315426849|dbj|BAJ48470.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 708 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 17/109 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDE 209 S D C+ C C CP+Y Y GP + + ++ Sbjct: 300 RSSMRDDPVFREALYCIRCGACMNICPTYSSLGGHVFGHIYTGPIGIPWTA--FVHGLEK 357 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + C + CP ++ IA++K + + Sbjct: 358 AAE--FAPL--------CISCGLCKEICPTIIDMPYMIAEVKHRYVQKG 396 >gi|323343935|ref|ZP_08084162.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella oralis ATCC 33269] gi|323095754|gb|EFZ38328.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Prevotella oralis ATCC 33269] Length = 424 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 12/89 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PF 222 + L +C+ C+ C+ CP Y GP S + + RL N + Sbjct: 12 ENNLEQCLKCSICTAYCPVSAITP-EYPGPK----------HSGPDQERYRLKNPKFFDE 60 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + A I + Sbjct: 61 ALKLCLNCKRCEVACPSDVRIADIIQSAR 89 >gi|288927590|ref|ZP_06421437.1| iron-sulfur cluster binding protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330424|gb|EFC69008.1| iron-sulfur cluster binding protein [Prevotella sp. oral taxon 317 str. F0108] Length = 456 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + R + +++ + E +C+ C C +CP Y Sbjct: 264 STTYTSHFRKARPGGEMHVVIVDNGRSDMIANDE----HWQTLKCIRCGACMNTCPVYR- 318 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ G + L C ++C CP + P Sbjct: 319 -------RSTGYSYSYFIPGPIGINLGMFKSPQQHSGNLSACSLCLSCDNVCPTKVAPGS 371 Query: 246 AIAKIKMML 254 + + L Sbjct: 372 QVYAWRQSL 380 >gi|212635175|ref|YP_002311700.1| electron transport complex protein RnfC [Shewanella piezotolerans WP3] gi|212556659|gb|ACJ29113.1| Electron transport complex, RnfABCDGE type, C subunit [Shewanella piezotolerans WP3] Length = 917 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 18/98 (18%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 LL S ++ C+ C C+ +CP+ L Q Y Sbjct: 358 KGTNCILLPSSDEVAPEQPEMPCIRCGECAVACPAQLLPQQ--LFWHAQAQEY------- 408 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D+ F L C C+ CP + + Sbjct: 409 DKAA---------SFNLNDCIECGCCSYVCPSDIPLVE 437 >gi|116749404|ref|YP_846091.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698468|gb|ABK17656.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 316 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 5/80 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 D + C+ C C +CP+ + + +W+ S D L Sbjct: 198 YFEDLIAPCIRCYACRNACPACYCPTCFVDEARP-----QWVGKSTDPTDTRTFHFLRAY 252 Query: 222 FRLYRCHTIMNCTQSCPKGL 241 RC C ++CP G+ Sbjct: 253 HLAGRCTDCGACERACPVGI 272 >gi|213583569|ref|ZP_03365395.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 60 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 23 GEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE 82 E + + R+NP+ P Y V D +LD L YIK+ + P L+ R SCR Sbjct: 2 AEMKNLKVEVVRYNPETDTAPHSAFYEVPYDET-TSLLDALGYIKDNLSPDLSYRWSCRM 60 >gi|52081970|ref|YP_080761.1| Iron-sulfur cluster binding protein YvfW [Bacillus licheniformis ATCC 14580] gi|52787358|ref|YP_093187.1| YvfW [Bacillus licheniformis ATCC 14580] gi|319647835|ref|ZP_08002053.1| YvfW protein [Bacillus sp. BT1B_CT2] gi|81608908|sp|Q65EM0|LUTB_BACLD RecName: Full=Lactate utilization protein B gi|52005181|gb|AAU25123.1| Iron-sulfur cluster binding protein YvfW [Bacillus licheniformis ATCC 14580] gi|52349860|gb|AAU42494.1| YvfW [Bacillus licheniformis ATCC 14580] gi|317390176|gb|EFV70985.1| YvfW protein [Bacillus sp. BT1B_CT2] Length = 477 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ D+++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+++CP + + + K + ++++ Sbjct: 360 PYASSLCAACSEACPVKIPLHELLLKHRQRIVEK 393 >gi|307823155|ref|ZP_07653385.1| FAD linked oxidase domain protein [Methylobacter tundripaludum SV96] gi|307735930|gb|EFO06777.1| FAD linked oxidase domain protein [Methylobacter tundripaludum SV96] Length = 1224 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 9/99 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPA-------ILLQAYRWLIDSRDEFQGERLDN 217 + + CV C C C + + P +++A + + E L Sbjct: 778 NKIAHCVRCGKCKPDCGVFHPAGSLFYHPRNKNLAIGAIIEALLFDAQREYSTKFELLQW 837 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C T C + CP ++ A + +L D Sbjct: 838 L--EEVSDHCTTCHKCAKPCPVDIDSADVSVLERRILAD 874 >gi|157415789|ref|YP_001483045.1| NADH dehydrogenase subunit G [Campylobacter jejuni subsp. jejuni 81116] gi|157386753|gb|ABV53068.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 81116] gi|307748428|gb|ADN91698.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni M1] gi|315931253|gb|EFV10223.1| 2Fe-2S iron-sulfur cluster binding domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 820 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMIVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|78355314|ref|YP_386763.1| rhodanese-like domain/cysteine-rich domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217719|gb|ABB37068.1| rhodanese-like domain/cysteine-rich domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 392 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 18/95 (18%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C C C CP + R L S L+ Sbjct: 31 RMAVQCTECGACVRMCPFLQEHGT-------PAHMARQLQHS----PQTVLNA------- 72 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C+ CP+ L+PA+ ++ + + Sbjct: 73 YACSLCSLCSAVCPEKLDPAQMFMDMRRAAVASGL 107 >gi|288803759|ref|ZP_06409187.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella melaninogenica D18] gi|288333746|gb|EFC72193.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella melaninogenica D18] Length = 418 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 12/88 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFR 223 + L +C+ C+ C+ CP Y GP S + + RL + + Sbjct: 13 NNLEQCLKCSICTAYCPVSAVEP-EYPGPK----------HSGPDLERYRLKDKKFFDNA 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ A I + Sbjct: 62 LKMCLNCKRCEVACPSGVRIADIIQASR 89 >gi|156740903|ref|YP_001431032.1| hypothetical protein Rcas_0899 [Roseiflexus castenholzii DSM 13941] gi|156232231|gb|ABU57014.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 520 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 13/112 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L+ + + + L C+ C C +C Y D L P R + +G+ Sbjct: 12 LRKNMTAEDVVNLEACMDCKMCGEACAWYLVTGDEKLHPTHKTGLIRQVYQRYMTLEGQI 71 Query: 215 -----------LDNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +D+L++ R + C CT +CP G++ + I ++ Sbjct: 72 GGALGLVPTPTVDDLKENMRYFWACTACGRCTLACPAGIS-TRRIVRLARAA 122 >gi|85860862|ref|YP_463064.1| electron transport complex protein, NADH-binding subunit [Syntrophus aciditrophicus SB] gi|85723953|gb|ABC78896.1| electron transport complex protein, NADH-binding subunit [Syntrophus aciditrophicus SB] Length = 439 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 29/120 (24%), Gaps = 18/120 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 L K +L D C+ C C +CP ++ L Sbjct: 336 MMGFAVSSLDIPVTKTCSGILFLTRDEIDEQPYGPCIRCGWCVEACPMGLSPNEIGLYVE 395 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 A D PF ++ C +C CP + I K Sbjct: 396 AGRAA--------DTA----------PFGVFDCFECGSCAFVCPAKRPLVQFIRLAKQKA 437 >gi|315425084|dbj|BAJ46756.1| Fe-S cluster binding protein [Candidatus Caldiarchaeum subterraneum] Length = 708 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 17/109 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDE 209 S D C+ C C CP+Y Y GP + + ++ Sbjct: 300 RSSMRDDPVFREALYCIRCGACMNICPTYSSLGGHVFGHIYTGPIGIPWTA--FVHGLEK 357 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + C + CP ++ IA++K + + Sbjct: 358 AAE--FAPL--------CISCGLCREICPTIIDMPYMIAEVKHRYVQKG 396 >gi|108805178|ref|YP_645115.1| FAD linked oxidase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108766421|gb|ABG05303.1| FAD linked oxidase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 952 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 17/94 (18%) Query: 170 CVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDP 221 C C T CPSY D R ++D +E G R+ + D Sbjct: 557 CNGSGFCRKKLSGTMCPSYMVTRDERDTTRARANLLRSVLDGTLPPEELTGRRMREVMD- 615 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C CP ++ A +K +L Sbjct: 616 ----LCVGCKACKTECPSRVDVAS----MKTEVL 641 >gi|83644718|ref|YP_433153.1| electron transport complex protein RnfC [Hahella chejuensis KCTC 2396] gi|83632761|gb|ABC28728.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Hahella chejuensis KCTC 2396] Length = 821 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + S ++ + D C+ C C+ +CP+ Y Sbjct: 350 NCIMAVSAKEFPRPDPAQACIRCGLCAEACPAELLPQQLYWF-----------------S 392 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + D E+ + L+ C C+ CP + + Sbjct: 393 KAQEFDKAEN-YNLFDCIECGACSYVCPSSIPLVQ 426 >gi|15896990|ref|NP_341595.1| hypothetical protein SSO0018 [Sulfolobus solfataricus P2] gi|284173857|ref|ZP_06387826.1| hypothetical protein Ssol98_04260 [Sulfolobus solfataricus 98/2] gi|13813147|gb|AAK40385.1| Hypothetical protein SSO0018 [Sulfolobus solfataricus P2] gi|261601644|gb|ACX91247.1| conserved hypothetical protein [Sulfolobus solfataricus 98/2] Length = 619 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 19/87 (21%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C C + CP +D + P + E L Sbjct: 284 FNGCILCGKCVSVCPYGKQTNDVFHTPLGFYSITYF----------------EKENDLAN 327 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 CH C Q CP L+ +++ Sbjct: 328 CHMCGLCEQVCPVRLDITN---ELRKA 351 >gi|205355588|ref|ZP_03222358.1| probable NADH dehydrogenase I chain G [Campylobacter jejuni subsp. jejuni CG8421] gi|205346365|gb|EDZ32998.1| probable NADH dehydrogenase I chain G [Campylobacter jejuni subsp. jejuni CG8421] Length = 820 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMIVESDLQNLWDERNEIMQAYCINHPLECGICDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|149912574|ref|ZP_01901108.1| putative glycolate oxidase [Roseobacter sp. AzwK-3b] gi|149812980|gb|EDM72806.1| putative glycolate oxidase [Roseobacter sp. AzwK-3b] Length = 973 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 11/96 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D R + R D + + Sbjct: 558 EMCNNNGACRKLKGGAMCPSYRVTRDERDVTRGRANTLRLALSGRLGKDALFSDEMAETM 617 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C C + CP G++ +AK+K +L ++ Sbjct: 618 KL--CVGCKACKRECPTGVD----MAKMKTEVLYQR 647 >gi|189346718|ref|YP_001943247.1| CoB--CoM heterodisulfide reductase [Chlorobium limicola DSM 245] gi|189340865|gb|ACD90268.1| CoB--CoM heterodisulfide reductase [Chlorobium limicola DSM 245] Length = 508 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 13/90 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP+ + + + R + Q L+ L+ C Sbjct: 33 CYQCGKCTAGCPAGGFMDNP------PTKIMRLV-------QAGYLEEAMRSNALWYCVG 79 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CP+ ++ A + ++ + + I Sbjct: 80 CQTCTSRCPQNMDIAATMDALRELAIKTGI 109 >gi|297625182|ref|YP_003706616.1| NADH-quinone oxidoreductase subunit I [Truepera radiovictrix DSM 17093] gi|297166362|gb|ADI16073.1| NADH-quinone oxidoreductase, chain I [Truepera radiovictrix DSM 17093] Length = 174 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 16/123 (13%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + K + V + H + + ++ + KP + +GL +C+ C+ C+ Sbjct: 4 LDIAKGMGVTLGHLFKKPVTVRYPEQPADIKPRFRGRHHL--LRHPNGLEKCIGCSLCAA 61 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+Y + D GER + + L RC C ++C Sbjct: 62 ACPAYAIYVEAA------------ENDPENPTSPGERYAKIYEINML-RCIFCGFCEEAC 108 Query: 238 PKG 240 P G Sbjct: 109 PTG 111 >gi|726065|gb|AAA87426.1| unknown [Methanothermobacter thermautotrophicus] Length = 380 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 31/249 (12%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDT--YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + + ++ + Y +PD+ +D + V+L + + + Y++ + Sbjct: 130 SAREMIETF--YEIDPDDVVREEIDKGKFIVELKDGSHKEI-SIDYLEEEG--------F 178 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD------LVVD--MS 130 R C C + + +AC ++ I V +I+ L V Sbjct: 179 GRRENCQRCELMVPRNADIACGNWGAEEGWTFIEVNTDRGEEIIEGARREGYLEVKEPPM 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSD 188 IE + ++ K + L+ Y C+ C C CP + Sbjct: 239 KMIEIREKIENAMIKMARKFQDKYLEDEYPSLDDWDEYWKRCINCFACRDLCPICFCREC 298 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L LL++ D FQG RL ++ + C C CP + A+ Sbjct: 299 E-LEKDYLLESDEKAPDPL-TFQGVRLSHMG-----FSCINCGQCEDVCPMDIPLARIYH 351 Query: 249 KIKMMLLDR 257 +I+ DR Sbjct: 352 RIQRKYRDR 360 >gi|303246563|ref|ZP_07332841.1| FAD linked oxidase domain protein [Desulfovibrio fructosovorans JJ] gi|302491903|gb|EFL51781.1| FAD linked oxidase domain protein [Desulfovibrio fructosovorans JJ] Length = 1174 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 27/92 (29%), Gaps = 9/92 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPF 222 C C C CP + P A LI+ S E LD L Sbjct: 728 CNRCGKCKQVCPMFAPEHGMLYHPRNKNIAIGALIEAIYYSQISHGEPDPALLDKLRKL- 786 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C CT CP + + ++ L Sbjct: 787 -VDHCTACGKCTSVCPVKIESGQVALGLRNFL 817 >gi|260892957|ref|YP_003239054.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ammonifex degensii KC4] gi|260865098|gb|ACX52204.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ammonifex degensii KC4] Length = 382 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C C C+ CP +++ Y P + R++ +E ++ Sbjct: 19 QSATQCFHCGNCTVVCP---LSTEDYQFPR---RFMRYVQLGMEEKIKHSIEP------- 65 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C+ +C + CP+ NP + + ++ L Sbjct: 66 WLCYYCGDCQRLCPRQANPGEVMMALRRYL 95 >gi|260587744|ref|ZP_05853657.1| oxidoreductase [Blautia hansenii DSM 20583] gi|260542009|gb|EEX22578.1| oxidoreductase [Blautia hansenii DSM 20583] Length = 374 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 18/215 (8%) Query: 45 MDTYYVDLDNCGPMVLDGLL---YIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACV 101 D + L+ D + P + + + D ++ Sbjct: 170 WDFVQIQLNYYDWYFTDAKELYEILTQAQIPIMVMEPVHGGLLANLTEKAADKLKSIDTD 229 Query: 102 KDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 + + V L ++ V+ + D S Y ++ + K ++ + Sbjct: 230 RSLASWAMR-WVMELENVQVVLSGMSDDSQLYDNIQTFSEAAPLAVEEQEK--IKEAAEM 286 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD--RYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 QK C C C+ +CP ++ A + A+R RD L + Sbjct: 287 QKATITVPCTECRYCTPNCPQGLDIPCLLKHYNTAKVGGAWRI----RD------LKQMS 336 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C CT+ CP+G K I +++ ML Sbjct: 337 EEKSPSACIGCKACTEHCPQGFEIPKYIKELEEML 371 >gi|110799792|ref|YP_695014.1| iron-sulfur cluster-binding protein [Clostridium perfringens ATCC 13124] gi|182420468|ref|ZP_02641980.2| iron-sulfur cluster-binding protein [Clostridium perfringens NCTC 8239] gi|110674439|gb|ABG83426.1| iron-sulfur cluster-binding protein [Clostridium perfringens ATCC 13124] gi|182381346|gb|EDT78825.1| iron-sulfur cluster-binding protein [Clostridium perfringens NCTC 8239] Length = 370 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP + ++ + + + Sbjct: 7 KKNLEDCVNCRLCYKVCPMMNTFGES----------------PKNILRDIDKNKISYDEI 50 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT++CPK +N + ++ Sbjct: 51 AYSCMLCNACTEACPKDINLKEMFQNLR 78 >gi|313904978|ref|ZP_07838349.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium cellulosolvens 6] gi|313470235|gb|EFR65566.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium cellulosolvens 6] Length = 439 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D C+ C C CP+ + + D E D L Sbjct: 355 KDEVAAHKTGSCINCGRCMKGCPARLM----------PNKLADFAKHG-DAASFEEYDGL 403 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E C +C+ SCP + A I ++ +L K Sbjct: 404 E-------CVNCGSCSFSCPAKRSLAGEINTMRQQILAAK 436 >gi|258516687|ref|YP_003192909.1| Heterodisulfide reductase subunit C-like protein [Desulfotomaculum acetoxidans DSM 771] gi|257780392|gb|ACV64286.1| Heterodisulfide reductase subunit C-like protein [Desulfotomaculum acetoxidans DSM 771] Length = 202 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C+ C C+ +C + P L + + + + + ++ Sbjct: 33 YVTTCMQCGMCAIACATREIMD---YSPRSLFNLIKL----------GKKEEVMNSNTMW 79 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + + C CP+G+ + +KM+ + + Sbjct: 80 MCTSCLTCKARCPRGIPLVDVMHDLKMLAIQQG 112 >gi|110834472|ref|YP_693331.1| electron transport complex protein RnfC [Alcanivorax borkumensis SK2] gi|110647583|emb|CAL17059.1| electron transport complex protein rnfC [Alcanivorax borkumensis SK2] Length = 991 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 22/92 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ CP+ L P L + + L+ + L C Sbjct: 398 CIRCGSCAEVCPAN-------LLPQQLYWH----------AKNDDLEKAQ-HHNLMDCIE 439 Query: 230 IMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 C CP + + A A+++ D+ Sbjct: 440 CGACAYVCPSHIPLVQYYRYAKAEVRQQAADQ 471 >gi|291441819|ref|ZP_06581209.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] gi|291344714|gb|EFE71670.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] Length = 953 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 31/114 (27%), Gaps = 9/114 (7%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRY 190 ++ +D CV C ++ CPSY D Sbjct: 514 NLRVSPHRTPLPLVTVFPFHADDGDFAKATRRCVGVGKCRSAAHRGDVMCPSYRVTLDEK 573 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + G R + D L C + C+ CP G++ A Sbjct: 574 DSTRGRARLLYEMTQGEVITDGWRSTEVRDA--LDLCLSCKGCSVDCPVGVDVA 625 >gi|282892636|ref|ZP_06300873.1| hypothetical protein pah_c277o003 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497680|gb|EFB40051.1| hypothetical protein pah_c277o003 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 734 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 14/142 (9%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + + +V + F R ++ + D + C C Sbjct: 517 PDLRMNPGKIVFPTPFLEDFRQGPQMQPSIVSPFLDFTREGGFD----LSVDLCNGNGRC 572 Query: 177 S----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 T CPS+ D Y QA R LI R + N+E L C Sbjct: 573 RKGEGTMCPSFQATQDEYDTTRARAQALRALI--RGDLANSTPSNVEVHAVLDLCLECKG 630 Query: 233 CTQSCPKGLNPAKAIAKIKMML 254 C CP ++ +AK+K + Sbjct: 631 CKTECPSQVD----MAKMKAEM 648 >gi|239933450|ref|ZP_04690403.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] Length = 968 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 31/114 (27%), Gaps = 9/114 (7%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRY 190 ++ +D CV C ++ CPSY D Sbjct: 529 NLRVSPHRTPLPLVTVFPFHADDGDFAKATRRCVGVGKCRSAAHRGDVMCPSYRVTLDEK 588 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + G R + D L C + C+ CP G++ A Sbjct: 589 DSTRGRARLLYEMTQGEVITDGWRSTEVRDA--LDLCLSCKGCSVDCPVGVDVA 640 >gi|253699927|ref|YP_003021116.1| hypothetical protein GM21_1298 [Geobacter sp. M21] gi|251774777|gb|ACT17358.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 411 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 17/97 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C C +L + D D R Sbjct: 15 CQTNIEGCTNCGKCVREC--------AFLRKYGTPKKIAAEFDPADSMSLHR-------- 58 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C+ C+ CP+ L+ +++ +DR + Sbjct: 59 -AFECNLCGLCSAVCPEKLDVDGMFLEMRREAVDRDL 94 >gi|157374047|ref|YP_001472647.1| FAD linked oxidase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316421|gb|ABV35519.1| FAD linked oxidase domain protein [Shewanella sediminis HAW-EB3] Length = 942 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + + Sbjct: 539 DDFVDKCLECGFCEKTCPTSALNFTPRQRIATLREIAR-LEQSGDQQAADEMRASAKYDV 597 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + K++ Sbjct: 598 IDTCAACQLCTIACPVDNKMGQLVRKLR 625 >gi|57238586|ref|YP_179717.1| NADH dehydrogenase subunit G [Campylobacter jejuni RM1221] gi|57167390|gb|AAW36169.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni RM1221] gi|315059023|gb|ADT73352.1| NADH-ubiquinone oxidoreductase chain G [Campylobacter jejuni subsp. jejuni S3] Length = 820 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPTNGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|269119596|ref|YP_003307773.1| electron transport complex, RnfABCDGE type, C subunit [Sebaldella termitidis ATCC 33386] gi|268613474|gb|ACZ07842.1| electron transport complex, RnfABCDGE type, C subunit [Sebaldella termitidis ATCC 33386] Length = 438 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 22/92 (23%) Query: 169 ECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C++C CS CP Y + + + + ++S Sbjct: 363 NCILCGYCSEVCPVYLMPMKFEEFYRKGKYKKLLEFNLNS-------------------- 402 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP + ++I K L K Sbjct: 403 CIECGACEYICPSRVALIESIKSGKKELAKGK 434 >gi|225023534|ref|ZP_03712726.1| hypothetical protein EIKCOROL_00392 [Eikenella corrodens ATCC 23834] gi|224943707|gb|EEG24916.1| hypothetical protein EIKCOROL_00392 [Eikenella corrodens ATCC 23834] Length = 477 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 7/81 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPFR 223 + C CP Y L+ +Y D R E +G R N++ Sbjct: 207 WLFAHIMREQVCKYMCP-YARFQSAMFDRDTLIISY----DPARGEPRGARKKNVQREDS 261 Query: 224 -LYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 262 DLGDCINCTLCVQVCPVGIDI 282 >gi|224370616|ref|YP_002604780.1| FAD-binding oxidoreductase (iron-sulfur cluster-binding domain protein) [Desulfobacterium autotrophicum HRM2] gi|223693333|gb|ACN16616.1| FAD-binding oxidoreductase (iron-sulfur cluster-binding domain protein) [Desulfobacterium autotrophicum HRM2] Length = 1200 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 5/96 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-----SRDEFQGERLDNLEDP 221 + CV C C SCP ++ + + P A LI+ ++ + Sbjct: 758 IANCVRCGRCKASCPVFFPQKNLFFHPRNKNLAVGALIEALLYTTQRTRSTKFRALQYLE 817 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C +CP ++ + + +L +R Sbjct: 818 EIADHCTICHKCLTNCPVNIDSGEVSVLEREILAER 853 >gi|163797063|ref|ZP_02191018.1| Iron-sulfur cluster binding protein [alpha proteobacterium BAL199] gi|159177579|gb|EDP62132.1| Iron-sulfur cluster binding protein [alpha proteobacterium BAL199] Length = 473 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 9/97 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPF 222 + C+ CA C CP Y G L S + L N Sbjct: 308 FQDMLRCIRCAACMNHCPVYAAVGGHAYGWVYPGPMGAVLTPSLIGIEEAGHLPNAS--- 364 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + K + + +R + Sbjct: 365 -----TFCGRCESVCPMRIPLPKMMRHYRTREFERGL 396 >gi|86149432|ref|ZP_01067663.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596191|ref|ZP_01099428.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121612814|ref|YP_001001213.1| NADH dehydrogenase subunit G [Campylobacter jejuni subsp. jejuni 81-176] gi|167006106|ref|ZP_02271864.1| NADH dehydrogenase subunit G [Campylobacter jejuni subsp. jejuni 81-176] gi|85840214|gb|EAQ57472.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|87249610|gb|EAQ72569.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88191032|gb|EAQ95004.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|315927681|gb|EFV07012.1| 2Fe-2S iron-sulfur cluster binding domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 820 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|317054863|ref|YP_004103330.1| electron transport complex, RnfABCDGE type subunit C [Ruminococcus albus 7] gi|315447132|gb|ADU20696.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus albus 7] Length = 420 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 19/97 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C+ +CP+ + + I R R++ ERL Sbjct: 338 NDPQQKTNCIKCGRCAHACPA------KLMPMRIEKALKR-----RNKAALERLRP---- 382 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP K I + ++DRK Sbjct: 383 ---DLCIKCGACTYVCPAKRELTKVIREA-AEIIDRK 415 Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 14/36 (38%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L DP + C C +CP L P + +K Sbjct: 337 LNDPQQKTNCIKCGRCAHACPAKLMPMRIEKALKRR 372 >gi|218885426|ref|YP_002434747.1| heterodisulfide reductase, C subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756380|gb|ACL07279.1| heterodisulfide reductase, C subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 186 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 13/94 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L C C C+ CP ++ + Q R L Q R D + + + Sbjct: 24 QDLTHCYQCGNCTAGCP------CGFVYDIQVSQIMRNL-------QAGRKDKVLNSRSI 70 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + +CT CP ++ A+ + ++ + Sbjct: 71 WLCLSCSSCTTRCPNNIDVARVMDVLRHIARREG 104 >gi|218563162|ref|YP_002344942.1| NADH dehydrogenase subunit G [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112360869|emb|CAL35670.1| putative NADH dehydrogenase I chain G [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 820 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|18309562|ref|NP_561496.1| iron-sulfur binding reductase [Clostridium perfringens str. 13] gi|18144239|dbj|BAB80286.1| probable iron-sulfur binding reductase [Clostridium perfringens str. 13] Length = 376 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 16/88 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L +CV C C CP + R + DE + + Sbjct: 13 KKNLEDCVNCGLCYKVCPMMNTFGE------SPKNILRDI----DENK------ISYDEI 56 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT+SCPK +N + ++ Sbjct: 57 AYSCMLCNACTESCPKDINLKEMFQNLR 84 >gi|113461204|ref|YP_719273.1| electron transport complex protein RnfC [Haemophilus somnus 129PT] gi|112823247|gb|ABI25336.1| electron transport complex protein [Haemophilus somnus 129PT] Length = 659 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP + Y D + E + L C Sbjct: 381 CIRCSACSDACPVHLMPQQLYWFARAE-----------DHKKSE-------EYALKECIE 422 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 423 CGLCAYVCPSHIPL---IQYFRQE--KAKI 447 >gi|291277047|ref|YP_003516819.1| putative D-lactate dehydrogenase [Helicobacter mustelae 12198] gi|290964241|emb|CBG40090.1| putative D-lactate dehydrogenase, Dld [Helicobacter mustelae 12198] Length = 965 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---------ECVMCACCSTSCPS- 182 Y H+ I+ ++ +++ C+ C C SCPS Sbjct: 499 YEIHKKIKEIFDPKGLLNPDVIISQNKNVHLQHFKASQSFLDLVDHCMDCGFCEKSCPSR 558 Query: 183 -YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + + + +Q D +D + + ++ F + C T C +CP + Sbjct: 559 FLTLTPRQRIASSKEIQRLSHSQDPQDILRAKEMEQEYQYFGVETCATCSMCKIACPLEI 618 Query: 242 NPAKA 246 + A Sbjct: 619 DTANI 623 >gi|255264139|ref|ZP_05343481.1| formate dehydrogenase, alpha subunit [Thalassiobium sp. R2A62] gi|255106474|gb|EET49148.1| formate dehydrogenase, alpha subunit [Thalassiobium sp. R2A62] Length = 930 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 46/177 (25%), Gaps = 34/177 (19%) Query: 82 EGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + V P V Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPSDGMVVVTNNERATNARRTVVEMLVADQPERDVAH 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D + + E + L L C+ C C +C Sbjct: 107 DKSSHLWDMADMNGVSESRFPKLEKGRIP--LLDDSHVAMSVNLDACIQCGLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 165 QVND--VIGMAGRGHDVYPTFD------------MADPMGASSCVACGECVQACPTG 207 >gi|238758875|ref|ZP_04620047.1| Electron transport protein [Yersinia aldovae ATCC 35236] gi|238702832|gb|EEP95377.1| Electron transport protein [Yersinia aldovae ATCC 35236] Length = 464 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 13/152 (8%) Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + A+ + L ++ + SHF + E + V + Sbjct: 245 PRMDDLAVFIRLLSRSALGSPITQYTSHFRGPRQGGEMHVILVDNG-----RSARLAMTD 299 Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C+ C +CP Y + G + S D + L Sbjct: 300 FWYSLKCIRCSACMNTCPVYRRSGGISYGAVYSGPIGAIINPSMDLKKYSTLPFASTLNG 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +CTQ CP +N + I K + ++ Sbjct: 360 --------SCTQVCPVRINIHEQIYKWREIVA 383 >gi|298368883|ref|ZP_06980201.1| cytochrome c oxidase accessory protein CcoG [Neisseria sp. oral taxon 014 str. F0314] gi|298282886|gb|EFI24373.1| cytochrome c oxidase accessory protein CcoG [Neisseria sp. oral taxon 014 str. F0314] Length = 483 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 71/279 (25%), Gaps = 50/279 (17%) Query: 7 PKRSRVK---RGKIWNAPTGEKNLKEYRI---------------YRWN---------PDN 39 PK S ++ G+ + E + RI + WN PD Sbjct: 17 PKSSVIQIHPEGERIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWNGRQAVIFNIPDR 76 Query: 40 KGNPCMDTYYVDLDNCGPMVLDGLLYI-------KNKIDPTLTLRRSCREGICGSCGMNI 92 + + L + L LL I I L SC + + + I Sbjct: 77 ----HFFIFGLSLGMGDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWI 132 Query: 93 DG-----TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 D N ++ I + + ++ F I ++ + Sbjct: 133 DNLVEGDRNKRLKLEKSPWNFTKIRIKATKALLILLFCAWTGITFAGWFVPIRQFVPDLF 192 Query: 148 PKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 A + C CP Y L+ +Y Sbjct: 193 AGAAGGGAMFAAAFYGFMTFFFAHVMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE-- 249 Query: 206 SRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNP 243 R E +G R L C C Q CP G++ Sbjct: 250 -RGEPRGARKKTANKEESGLGDCINCTMCVQVCPVGIDI 287 >gi|294507972|ref|YP_003572030.1| glycolate oxidase subunit [Salinibacter ruber M8] gi|294344300|emb|CBH25078.1| Glycolate oxidase subunit [Salinibacter ruber M8] Length = 985 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 35/114 (30%), Gaps = 13/114 (11%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 T +P + L ED + +C C T CPS+ + Sbjct: 532 RMGPTYETEPFRTELDFSEDGGFTGAIEKCNGNGACRKLRAGTMCPSFMATREEPDSTRG 591 Query: 196 LLQAYRWLID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + S D G+ + + D C C CP ++ AK Sbjct: 592 RANALRSALAGDLSEDAMTGDDMHEVMD-----LCVQCKACKTECPSNVDMAKI 640 >gi|254785634|ref|YP_003073063.1| electron transport complex, RnfABCDGE type, C subunit [Teredinibacter turnerae T7901] gi|237685331|gb|ACR12595.1| electron transport complex, RnfABCDGE type, C subunit [Teredinibacter turnerae T7901] Length = 505 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 24/86 (27%), Gaps = 18/86 (20%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ CA C +CP L A +A + D + L Sbjct: 369 EASPCIRCASCVEACPMGLLP----LEMAARSRADDFEG--------------ADDYGLR 410 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIK 251 C +C CP + + K Sbjct: 411 DCILCGSCAYVCPSHIPLVQYFQYAK 436 >gi|56476980|ref|YP_158569.1| formate dehydrogenase alpha subunit, molybdenum or tungsten enzyme [Aromatoleum aromaticum EbN1] gi|56313023|emb|CAI07668.1| Formate dehydrogenase alpha subunit,molybdenum or tungsten enzyme [Aromatoleum aromaticum EbN1] Length = 950 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 54/216 (25%), Gaps = 28/216 (12%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGT 95 P N +D +D ++L P L R +G C +C + IDG Sbjct: 4 PTNPVRFELDGREIDAQPGETILLAA--RRAGVDIPHLCYTDGMRADGNCRACVVEIDGE 61 Query: 96 NTLAC-VKDMKDIKGAIAVYPLPHMSVIK--------DLVVDMSHFYSQHRSIEPWLKTV 146 LA + + + D+ S+ L Sbjct: 62 RVLAPSCCRAPKPGMKVKATSERARASQRLVLELLRADVPAAAEKPDSELAHWCDELGVT 121 Query: 147 SPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + A + L C+ C C +C N L A + Sbjct: 122 DSRFAPRAQPQPDRSHPGIAVDLAACIQCTRCVRACREVQVNDVIGLARRGADTAIVFDF 181 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D D C C Q+CP G Sbjct: 182 D--------------DAMGTSSCVGCGECVQACPTG 203 >gi|300245653|gb|ADJ93884.1| putative benzoate-degrading protein BamC [Clostridia bacterium enrichment culture clone BF] Length = 383 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 15/90 (16%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C T CP WN R L++ + L +E+ ++RC T Sbjct: 25 CYQCGKCDTVCP---WNRVRSFSMRKLIREAVFG-----------LTEIENEE-IWRCTT 69 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C Q CP+ + + + ++ M + Sbjct: 70 CGKCPQKCPRDVKQIQNMVGLRRMATSYGV 99 >gi|83589304|ref|YP_429313.1| heterodisulfide reductase subunit C-like [Moorella thermoacetica ATCC 39073] gi|83572218|gb|ABC18770.1| Heterodisulfide reductase subunit C-like protein [Moorella thermoacetica ATCC 39073] Length = 156 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 12/98 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CA C++ CP Y I A + + Sbjct: 11 WPAFTTMRACYQCARCTSGCPV-ATLDPEYNPRRIFRLAVLGE-----------KEAVLK 58 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L+ C C + CP+ PA+ + +K + +R Sbjct: 59 DEKLWYCLACYTCQERCPEEARPAEVLLALKNLACERG 96 >gi|300245901|gb|ADJ94008.1| hypothetical protein [Clostridia bacterium enrichment culture clone BF] Length = 383 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 15/90 (16%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C T CP WN R L++ + L +E+ ++RC T Sbjct: 25 CYQCGKCDTVCP---WNRVRSFSMRKLIREAVFG-----------LTEIENEE-IWRCTT 69 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C Q CP+ + + + ++ M + Sbjct: 70 CGKCPQKCPRDVKQIQNMVGLRRMATSYGV 99 >gi|224368548|ref|YP_002602711.1| putative heterodisulfide reductase, subunit HdrC [Desulfobacterium autotrophicum HRM2] gi|223691264|gb|ACN14547.1| putative heterodisulfide reductase, subunit HdrC [Desulfobacterium autotrophicum HRM2] Length = 146 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 10/90 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C CP D + R L R +N+ + L+ C Sbjct: 14 CVDCGKCVAVCPMAEMYQDFSADISPRGIIQRAL----------RQENILEDAGLWCCVG 63 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q CP+G+N + I ++ + + + + Sbjct: 64 CNAGAQVCPEGVNCRELIKGLRNVAIQQNL 93 >gi|168186752|ref|ZP_02621387.1| electron transport complex protein RnfC [Clostridium botulinum C str. Eklund] gi|169295307|gb|EDS77440.1| electron transport complex protein RnfC [Clostridium botulinum C str. Eklund] Length = 439 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ C C +CP +L P+ +DS + + Sbjct: 355 EKQAVLPEESSCIRCGRCVEACPM-------FLIPSK--------LDSLGRRKE--YEEF 397 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E+ L C +CT CP + ++I K +L K Sbjct: 398 EENNGL-DCIECGSCTFVCPAKRHLIQSIRTSKRTVLANK 436 >gi|330993014|ref|ZP_08316952.1| Lactate utilization protein B [Gluconacetobacter sp. SXCC-1] gi|329759784|gb|EGG76290.1| Lactate utilization protein B [Gluconacetobacter sp. SXCC-1] Length = 469 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 21/182 (11%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS--------QHR 137 G+ + + N I + L + + DL V + Q+ Sbjct: 213 GTFVVCTNEGNADLSATVPNLHIATIGIERL--VPRMADLGVFVRLLSRSALGSPITQYT 270 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + R ++ + +C+ C C +CP Y + G Sbjct: 271 THFRGPQKGGEMHVVLVDNGRSARLGMEDFWTSLKCIRCGACMNTCPVYRRSGGLSYGAV 330 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D ER + Y +CT CP +N + + K + +L Sbjct: 331 YSGPIGAII----DPTFNERKYSTLP----YASTLNGSCTNVCPVKINIHEQLYKWRRVL 382 Query: 255 LD 256 + Sbjct: 383 VQ 384 >gi|194292239|ref|YP_002008146.1| tugsten containing formate dehydrogenase alpha subunit; 2fe-2S ferredoxin n-term domain [Cupriavidus taiwanensis LMG 19424] gi|193226143|emb|CAQ72090.1| tugsten containing formate dehydrogenase alpha subunit; 2Fe-2S ferredoxin N-term domain [Cupriavidus taiwanensis LMG 19424] Length = 940 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 50/169 (29%), Gaps = 25/169 (14%) Query: 83 GICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD----LVVDM-SHFYSQH 136 G C +C + I G LA + + L DM Y+++ Sbjct: 60 GNCRACMVEIQGERVLAPSCCRYPAAGMQVQTESERARRAQRTVLELLQSDMPEAEYTRN 119 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDG-----LYECVMCACCSTSCPSYWWNSDRYL 191 ++ W + + + L C+ C C +C N + Sbjct: 120 NELDQWAARLEVGKPRFAPRERVSADLSHPAIAVNLDACIQCTRCLRACRDEQVND--VI 177 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G A+ R + D ++DP C C Q+CP G Sbjct: 178 GLALRGDDARIVFD------------MDDPMGASTCVACGECVQACPTG 214 >gi|15922476|ref|NP_378145.1| hypothetical protein ST2149 [Sulfolobus tokodaii str. 7] gi|15623266|dbj|BAB67254.1| 1000aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 1000 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 20/100 (20%) Query: 169 ECVMCACCSTSCPSYWWNSD---------RYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 EC+ CA C T CP + ++ AI +D D E Sbjct: 515 ECIDCAMCVTVCPQFRLIPQVPYAPKGMFDFVKGAISYHHLYGSVDIPDSAIAE------ 568 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + CH C CP + + + K+ ++ +K+ Sbjct: 569 ----ISGCHKCGLCDGVCPAKIPISSLLVKLNS-IVAKKV 603 >gi|223984137|ref|ZP_03634289.1| hypothetical protein HOLDEFILI_01581 [Holdemania filiformis DSM 12042] gi|223963931|gb|EEF68291.1| hypothetical protein HOLDEFILI_01581 [Holdemania filiformis DSM 12042] Length = 446 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS CP+ L P + QA + + + LE + C Sbjct: 374 CLRCGRCSDHCPA-------GLQPVRINQA----------EKSKNVAMLE-KLSIMDCIE 415 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ CP ++ + + + K + R Sbjct: 416 CGMCSFVCPSKIDVTEGVRRAKRYMALRA 444 >gi|121996863|ref|YP_001001650.1| FAD linked oxidase domain-containing protein [Halorhodospira halophila SL1] gi|121588268|gb|ABM60848.1| FAD linked oxidase domain protein [Halorhodospira halophila SL1] Length = 1286 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDP 221 +C+ C C C ++ ++ P + A +I +R D + D Sbjct: 817 DCLRCGKCKPVCSTHVPRANLLYSPRNKILAAGLIIEAFLYEEQTRRGLSLRHFDVMNDV 876 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ +++ +L RK Sbjct: 877 --ADHCTICHKCLKPCPVNIDFGDVTIRLRDILQRRK 911 >gi|116748725|ref|YP_845412.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697789|gb|ABK16977.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 385 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 13/95 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + +C C C+ CP ++ P +++ + G++ L Sbjct: 14 EAFGLKDAAKCYNCGTCTAVCP---LSTPDNPFPRKMVRYAQL---------GQKDKILA 61 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 P + C+ +C+ CP+G P + + ++ L Sbjct: 62 SPEP-WLCYYCGDCSTRCPRGAEPGETMMVMRRYL 95 >gi|256828848|ref|YP_003157576.1| hypothetical protein Dbac_1047 [Desulfomicrobium baculatum DSM 4028] gi|256578024|gb|ACU89160.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfomicrobium baculatum DSM 4028] Length = 429 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 14/92 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + + L + ++DP Sbjct: 16 DDQMVACMKCGMCQAVCPVFAETMNEGDVARGKIALLENLSH----------EMIKDPEG 65 Query: 224 LY----RCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C +C +CP G+ K + Sbjct: 66 VQEKLNMCLLCGSCAANCPSGVKVLDIFLKAR 97 >gi|121996875|ref|YP_001001662.1| RnfABCDGE type electron transport complex subunit C [Halorhodospira halophila SL1] gi|121588280|gb|ABM60860.1| electron transport complex, RnfABCDGE type, C subunit [Halorhodospira halophila SL1] Length = 448 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 17/86 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + C+ C C CP L PA L + + +E Sbjct: 366 DESEQPPTQPCIRCGRCVEVCPV-------GLNPAELGRL----------AAKRQYAVME 408 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + F L C C+ CP + + Sbjct: 409 ERFHLNDCFECGCCSYVCPSNIPLVQ 434 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 4/32 (12%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP GLNP A++ + R+ Sbjct: 376 CIRCGRCVEVCPVGLNP----AELGRLAAKRQ 403 >gi|330823537|ref|YP_004386840.1| FAD linked oxidase domain-containing protein [Alicycliphilus denitrificans K601] gi|329308909|gb|AEB83324.1| FAD linked oxidase domain protein [Alicycliphilus denitrificans K601] Length = 1305 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L +A+ + +R ED Sbjct: 836 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGISSHHWQEFEDV 895 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C CP ++ ++ +L+ Sbjct: 896 --ADHCTICHRCYNPCPVKIDFGDVTMAMRSLLVK 928 >gi|319761666|ref|YP_004125603.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC] gi|317116227|gb|ADU98715.1| FAD linked oxidase domain protein [Alicycliphilus denitrificans BC] Length = 1306 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L +A+ + +R ED Sbjct: 836 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGISSHHWQEFEDV 895 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C CP ++ ++ +L+ Sbjct: 896 --ADHCTICHRCYNPCPVKIDFGDVTMAMRSLLVK 928 >gi|123455670|ref|XP_001315577.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121898258|gb|EAY03354.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 499 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 42/171 (24%), Gaps = 28/171 (16%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CG C + +G +C + + P + + + + + I + Sbjct: 53 CGLCRVIANGKKEFSCNTRITEGMTINTQDP----GIKRSNIKKVQRMAMKDEDIANAYR 108 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + K+ C+ C C CP+ +L Sbjct: 109 MIQDPTRKQTHTDITTGSISLNHAACIDCYKCVDVCPTGALTKGNHLQTFGHFGL----- 163 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP-KGLNPAKAIAKIKMML 254 RD C + C CP K + I + + Sbjct: 164 --RDS----------------GCVSCGACVDVCPTKAITVTDNIPVWRGAM 196 >gi|78044369|ref|YP_361200.1| putative reductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996484|gb|ABB15383.1| putative reductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 442 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E R + C C C +C SY D Y P R + L + Sbjct: 37 ESRMFKLAMECCTKCGACINACHSYLGTEDPYNIPTKRADLVRSVYKQEVMPLSGVLGKV 96 Query: 219 EDPFR------------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 Y+C+ C CP G++ A+ ++ +L + Sbjct: 97 AGGIGISAELLEKWFTYFYQCNQCRRCALVCPFGIDTAEVTIMVRQILAE 146 >gi|71906320|ref|YP_283907.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dechloromonas aromatica RCB] gi|71845941|gb|AAZ45437.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Dechloromonas aromatica RCB] Length = 471 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 26/83 (31%), Gaps = 7/83 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDP 221 + C CP Y P L+ Y D R E +G R ++ Sbjct: 204 FTYLFAGFMREQVCKYMCP-YARFQSVMFDPDTLIITY----DPDRGETRGARKKGVDAK 258 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 259 AAGLGDCVDCGLCVQVCPTGIDI 281 >gi|332993969|gb|AEF04024.1| electron transport complex protein RnfC [Alteromonas sp. SN2] Length = 866 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 18/90 (20%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S ++ + C+ C+ C+ +CP L P + + + Sbjct: 370 PSKKELVDDNAERPCIRCSACADACPVS-------LLPQQMFWH----------AKAKEY 412 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D ED L+ C C CP + Sbjct: 413 DKAEDYD-LFDCIECGACAYVCPSEIPLVH 441 >gi|322514848|ref|ZP_08067866.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus ureae ATCC 25976] gi|322119152|gb|EFX91297.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Actinobacillus ureae ATCC 25976] Length = 346 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C+ C C+ CP N Y GP S + + RL + + Sbjct: 21 QHFDPSFESCLKCTACTAVCPVSRNNP-FYPGPK----------QSGPDGECLRLKSPDF 69 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C + P + I +++ ++R+ Sbjct: 70 YDEALKYCTNCKRCEIAYPSDVKIGDIIVRVRNRHVERQ 108 >gi|299135500|ref|ZP_07028689.1| FAD linked oxidase domain protein [Afipia sp. 1NLS2] gi|298589755|gb|EFI49961.1| FAD linked oxidase domain protein [Afipia sp. 1NLS2] Length = 1003 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 15/148 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V + D S F R + + C C Sbjct: 537 PGKIVHPPKMDDRSLF----RFKPGYKVEDFKTELDWSAYPGAAGGFQGAVEMCNNNGAC 592 Query: 177 ST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 CPSY + R I + D + + +L C + Sbjct: 593 RKLEGGVMCPSYRATRNEKDVTRGRANTLRLAISGQLGPDALSSDEMMETMKL--CVSCK 650 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP G++ +AK+K+ +L ++ Sbjct: 651 ACRRECPTGVD----MAKMKIEVLAARV 674 >gi|261379572|ref|ZP_05984145.1| NADH dehydrogenase, I subunit [Neisseria subflava NJ9703] gi|269214461|ref|ZP_05986605.2| NADH dehydrogenase, I subunit [Neisseria lactamica ATCC 23970] gi|296313738|ref|ZP_06863679.1| NADH dehydrogenase, I subunit [Neisseria polysaccharea ATCC 43768] gi|313669276|ref|YP_004049560.1| NADH dehydrogenase I chain I [Neisseria lactamica ST-640] gi|261391783|emb|CAX49238.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I; NDH-1, chain I) [Neisseria meningitidis 8013] gi|269209739|gb|EEZ76194.1| NADH dehydrogenase, I subunit [Neisseria lactamica ATCC 23970] gi|284798046|gb|EFC53393.1| NADH dehydrogenase, I subunit [Neisseria subflava NJ9703] gi|296839661|gb|EFH23599.1| NADH dehydrogenase, I subunit [Neisseria polysaccharea ATCC 43768] gi|308388470|gb|ADO30790.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha710] gi|313006738|emb|CBN88208.1| NADH dehydrogenase I chain I [Neisseria lactamica 020-06] gi|325130978|gb|EGC53705.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis OX99.30304] Length = 159 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGLGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|188579565|ref|YP_001923010.1| formate dehydrogenase, alpha subunit [Methylobacterium populi BJ001] gi|179343063|gb|ACB78475.1| formate dehydrogenase, alpha subunit [Methylobacterium populi BJ001] Length = 989 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 72/250 (28%), Gaps = 52/250 (20%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD---LDNCGPMVLDGLLYIKNKID 71 G+ P+G LKE I P T+ +D ++ + + Sbjct: 48 GQAAPEPSGTFGLKEAPI---------APATITFELDGQQVEAQPGETIWAVSKRLGTHI 98 Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACV------------------KDMKDIKGA 110 P L + C +C + I+G LA + + Sbjct: 99 PHLCHKPEPGYRPDGNCRACMVEIEGERVLAASCKRTPAIGMKVKTATERATKARAMVLE 158 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P + D SHF+ Q ++ SH L C Sbjct: 159 LLVADQPERATSHD---PSSHFWVQADYLDVSESRFPAAERWSSDVSHPA--MSVNLDAC 213 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N ++ AYR + + + +DP C Sbjct: 214 IQCNLCVRACREVQVND-------VIGMAYR-------SADSKVVFDFDDPMGASTCVAC 259 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 260 GECVQACPTG 269 >gi|308272513|emb|CBX29117.1| hypothetical protein N47_J00980 [uncultured Desulfobacterium sp.] Length = 403 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 22/92 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C + C W++ + P +++ + +D + L ++ C Sbjct: 27 DCMTCGICLSRCS--WYDGEGGPVPRQMVRMAQLGLD----------NLLGQSHMIWDCM 74 Query: 229 TIMNCTQSCPKGL----------NPAKAIAKI 250 +CT CP G+ + AI ++ Sbjct: 75 LCNHCTVECPVGIVMEDVVRKARSLPDAIERM 106 >gi|288940904|ref|YP_003443144.1| RnfABCDGE type electron transport complex subunit C [Allochromatium vinosum DSM 180] gi|288896276|gb|ADC62112.1| electron transport complex, RnfABCDGE type, C subunit [Allochromatium vinosum DSM 180] Length = 461 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 20/106 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L+ + +Y C+ C C +CP + LG + + Y Sbjct: 365 LEPEDPALARRQVYPCIKCGECLRACPV--SLNPSMLGELAVAREY-------------- 408 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK-IKMMLLDR 257 + + F L +C C CP + + IAK I R Sbjct: 409 -GVMAEQFNLDQCFECGCCAFVCPSNIPLTQYFRIAKSINRDARRR 453 >gi|154150829|ref|YP_001404447.1| aldo/keto reductase [Candidatus Methanoregula boonei 6A8] gi|153999381|gb|ABS55804.1| aldo/keto reductase [Methanoregula boonei 6A8] Length = 410 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 2/156 (1%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A VK V P ++V+ + D + R+ L + +L Sbjct: 224 APVKRSAAEWALRWVLDHPEVTVVLSGMNDEAQIDENIRTAGAVLPRSLTPEDRAILDDA 283 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C C C CP+ + + + R ++ G L Sbjct: 284 KAAFRQLMKVGCTGCGYCMP-CPAGVDIPGCFAFYNARHLFPK-DKNPRFQYIGHHGGLL 341 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 P C C ++CP+ L + + +K + Sbjct: 342 NKPSNAGLCKNCGKCEKACPQHLPIPRLLKDVKADM 377 >gi|83590044|ref|YP_430053.1| heterodisulfide reductase, C subunit [Moorella thermoacetica ATCC 39073] gi|83572958|gb|ABC19510.1| heterodisulfide reductase, C subunit [Moorella thermoacetica ATCC 39073] Length = 184 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + L + R + C C C+ CP + Q R++ +E Sbjct: 10 QQLVAPVARLSGQPVNRCYQCHKCTGGCPVTAVMD------LMPHQVVRYVQLGLEE--- 60 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L +++C C CP G++ A +K L R I Sbjct: 61 ----ELLKSKTIWQCAACRTCISRCPNGIDIAAINDALKQRALARGI 103 >gi|330466678|ref|YP_004404421.1| putative Fe4-S4 ferredoxin [Verrucosispora maris AB-18-032] gi|328809649|gb|AEB43821.1| putative Fe4-S4 ferredoxin [Verrucosispora maris AB-18-032] Length = 476 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 28/174 (16%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 242 NGRMCLTLPETLITVMGIEKVVPTWQDLEVFLQLLPRASTGERMNPYTSMWTGVTPGDGP 301 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 + D + L C+ C+ C CP Y Y GP + Sbjct: 302 QAFHLVLLDNGRSAVLADPTGRRALHCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVL 361 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + L + D L Y C +CP +N + + +++ Sbjct: 362 SPQ-------------LTGVADNASLPYASSLCGACYDACPVMINIPELLVQLR 402 >gi|300716526|ref|YP_003741329.1| Electron transport complex protein [Erwinia billingiae Eb661] gi|299062362|emb|CAX59479.1| Electron transport complex protein [Erwinia billingiae Eb661] Length = 707 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 36/137 (26%), Gaps = 23/137 (16%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV-----SPKPAKELLQSHEDRQKIDGLY 168 P+ H+ D + + L + + + Sbjct: 316 TPISHLLHNADFSPASGQMVVMGGPLMGFTLPTLDVPVVKITNCILAPAANEMGDNEAEQ 375 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ A+L Q W +D + + C Sbjct: 376 SCIRCSACADACPA-----------ALLPQQLYWYSRGKDHDKAR-------EHNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|299821352|ref|ZP_07053240.1| iron-sulfur cluster-binding protein [Listeria grayi DSM 20601] gi|299817017|gb|EFI84253.1| iron-sulfur cluster-binding protein [Listeria grayi DSM 20601] Length = 490 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L S E+ L L Sbjct: 312 QCIRCGSCLNVCPIYRTIGGHGYGSIYPGPIGAVL--SPVLGGYEQFGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIAHRRVMTDE 393 >gi|54633798|gb|AAV36009.1| hydrogenosomal succinate dehydrogenase beta subunit [Nyctotherus ovalis] Length = 82 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 3/82 (3%) Query: 91 NIDGTNTLACVK-DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP- 148 NIDG + LAC K+ V PL M+V+KDLVVDMS+FY+Q++ I+P+LK +P Sbjct: 1 NIDGRHNLACTTAIPKNNLEESFVAPLTFMNVLKDLVVDMSNFYNQYKVIQPFLKRKTPK 60 Query: 149 -KPAKELLQSHEDRQKIDGLYE 169 KE QS EDR KIDGLYE Sbjct: 61 KPGDKEYYQSAEDRAKIDGLYE 82 >gi|289706793|ref|ZP_06503136.1| iron-sulfur cluster-binding protein [Micrococcus luteus SK58] gi|289556478|gb|EFD49826.1| iron-sulfur cluster-binding protein [Micrococcus luteus SK58] Length = 546 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 15/94 (15%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + + D + L Sbjct: 332 HCIRCSACMNVCPVYEQTGGHAYGSVYPGPIGAILSPQLT--GVDAGENGTLP------- 382 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CP ++ + ++ + Sbjct: 383 -YASTLCGACYDVCPVAIDIPSILIHLRDEDVQA 415 >gi|289207730|ref|YP_003459796.1| FAD linked oxidase [Thioalkalivibrio sp. K90mix] gi|288943361|gb|ADC71060.1| FAD linked oxidase domain protein [Thioalkalivibrio sp. K90mix] Length = 1280 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++++A+ + +R D + D Sbjct: 811 DCLRCGKCKPECNTHVPRANLLYSPRNKILATGLIVEAFLYEEQTRRGLSLHHFDEMNDV 870 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ ++ +L + Sbjct: 871 --ADHCTICHKCLNPCPVDIDFGDVTMHMRSILKKKG 905 >gi|124008838|ref|ZP_01693526.1| iron-sulfur cluster-binding protein [Microscilla marina ATCC 23134] gi|123985629|gb|EAY25514.1| iron-sulfur cluster-binding protein [Microscilla marina ATCC 23134] Length = 473 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 17/96 (17%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y + Y GP + E+ +L Sbjct: 309 NCIRCGACLNACPVYKNIGGHTYNTTYSGPIGSIITPNL-------AGMEKFKHLSYASS 361 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C CP ++ K + + +K+ Sbjct: 362 L-----CGACASVCPVKIDIPKQLLLNRHESTKQKL 392 >gi|325128143|gb|EGC51036.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis N1568] Length = 1277 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|213964598|ref|ZP_03392798.1| iron-sulfur cluster-binding protein [Corynebacterium amycolatum SK46] gi|213952791|gb|EEB64173.1| iron-sulfur cluster-binding protein [Corynebacterium amycolatum SK46] Length = 532 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 51/180 (28%), Gaps = 24/180 (13%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + + + V L+ S + W T Sbjct: 245 NGRMCLTLPETLISVMGIEKLLPTFQDLEVFLQLLPRSSTGERMNPYTSLWTGTTDGDGP 304 Query: 152 KELLQSHEDRQKIDGLYE--------CVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 K D + L + C+ C+ C CP Y Y GP + Sbjct: 305 KNFHIVLLDNGRSATLADPIGREALKCIRCSACLNICPVYEHVGGHAYGSVYPGPIGAIL 364 Query: 199 AYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + +DS D+ Y C + CP ++ A+ +++ + Sbjct: 365 SPQLTGMDSYDDPNASLP---------YASSLCGACFEVCPVRIDIPAALLELRHRKVTE 415 >gi|260911005|ref|ZP_05917641.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634809|gb|EEX52863.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 104 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 11/98 (11%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDP----TLTLRRSCREGI 84 +++R N K DT+ + L+ L + ++ CREGI Sbjct: 8 TLKVWRQN-GPKAKGHFDTFEMKDIPGDTSFLEMLDILNEQLIEARQEPFVFDHDCREGI 66 Query: 85 CGSCGMNIDGTNT------LACVKDMKDIKGAIAVYPL 116 CG C + I+G C M+ K + Sbjct: 67 CGMCSLYINGHPHGPAAGATTCQLYMRRFKDGDVITVE 104 >gi|238620908|ref|YP_002915734.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus M.16.4] gi|238381978|gb|ACR43066.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus M.16.4] Length = 979 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGKSSCVNCGTCVTVCPVN 203 >gi|240146042|ref|ZP_04744643.1| Na(+)-translocating NADH-quinone reductase, A subunit [Roseburia intestinalis L1-82] gi|257201858|gb|EEV00143.1| Na(+)-translocating NADH-quinone reductase, A subunit [Roseburia intestinalis L1-82] gi|291536100|emb|CBL09212.1| electron transport complex, RnfABCDGE type, C subunit [Roseburia intestinalis M50/1] gi|291539041|emb|CBL12152.1| electron transport complex, RnfABCDGE type, C subunit [Roseburia intestinalis XB6B4] Length = 441 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 18/115 (15%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T + + E C+ C C +CP L P+ + ++ Sbjct: 342 PTTKTSSSLLCMSQDEVAAAEKLQTACINCGRCVEACP-------EQLIPS---RLAKFS 391 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D+ E + C +C+ +CP A++I +K +L K Sbjct: 392 ----DKGLSEEFEKWHGLE----CVECGSCSFACPAKRQLAQSIKTMKKQVLAAK 438 >gi|224369915|ref|YP_002604079.1| LdhB [Desulfobacterium autotrophicum HRM2] gi|223692632|gb|ACN15915.1| LdhB [Desulfobacterium autotrophicum HRM2] Length = 437 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 14/97 (14%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C C C + CP Y L L+D + + DP Sbjct: 15 EDQLVICNRCGMCQSVCPLYEQTRKESDVARGKLA----LLDGLSK------NLFTDPDG 64 Query: 224 LY----RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C +C +CP G++ + K + ++ + Sbjct: 65 VDKRLNNCLLCGSCAANCPSGVSVLEIFIKARAIIAE 101 >gi|218782883|ref|YP_002434201.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764267|gb|ACL06733.1| 4Fe-4S Ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 315 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 5/82 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C +CP + + + +W+ S D+ L Sbjct: 197 HFEQLLDGCIRCYACRNACPLCYCPTC-----FVDESQPQWVGKSVDKTDTRTFHFLRAY 251 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 RC C ++CP G+ Sbjct: 252 HCAGRCTDCGACERACPVGIPV 273 >gi|319938178|ref|ZP_08012576.1| hypothetical protein HMPREF9488_03412 [Coprobacillus sp. 29_1] gi|319806699|gb|EFW03348.1| hypothetical protein HMPREF9488_03412 [Coprobacillus sp. 29_1] Length = 434 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 18/86 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ CP++ L P ++ E + L+ + RC Sbjct: 359 PCLKCGECTLHCPAH-------LQPV-------RIMQGEKAGNVELIGKLD----VERCV 400 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 CT CP + +AK K Sbjct: 401 ECGMCTYICPSKIEVTDMVAKAKRRY 426 >gi|315634428|ref|ZP_07889715.1| electron transport complex protein RnfC [Aggregatibacter segnis ATCC 33393] gi|315477018|gb|EFU67763.1| electron transport complex protein RnfC [Aggregatibacter segnis ATCC 33393] Length = 701 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 28/100 (28%), Gaps = 23/100 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ CS +CP Y W S + + E Sbjct: 368 EYAPPEQEKSCIRCSACSDACPVKLMPQQLY-----------WFARSENHEKSE------ 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L C C CP + I + KI Sbjct: 411 -EYSLKDCIECGVCAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|255281006|ref|ZP_05345561.1| putative anaerobic sulfite reductase, A subunit [Bryantella formatexigens DSM 14469] gi|255268454|gb|EET61659.1| putative anaerobic sulfite reductase, A subunit [Bryantella formatexigens DSM 14469] Length = 349 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 21/141 (14%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + + ++ + + + + C+ C C+ CP+ + Sbjct: 197 ENIRRIVEKLPYSHLSLEGWNGEAQKEKFDSPLWEELYKPCLACGTCTFVCPTCQCYDIK 256 Query: 190 YLGPAILLQAYR-----------WLIDSRDEF------QGERLDNLE----DPFRLYRCH 228 +Q YR + + + + L + +Y C Sbjct: 257 DYDTGHGVQRYRCWDSCMYSDFTMMAHGNNRTSQMQRFRQRFMHKLVYFPANNDGMYSCV 316 Query: 229 TIMNCTQSCPKGLNPAKAIAK 249 C + CP LN K I K Sbjct: 317 GCGRCVEKCPASLNIVKVIKK 337 >gi|86153156|ref|ZP_01071361.1| nadh oxidoreductase i [Campylobacter jejuni subsp. jejuni HB93-13] gi|85844041|gb|EAQ61251.1| nadh oxidoreductase i [Campylobacter jejuni subsp. jejuni HB93-13] Length = 820 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 63/245 (25%), Gaps = 58/245 (23%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMK--- 105 +D + + + P + C C C + DG +C K Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKEGM 67 Query: 106 ------DIKGAIAVYPLPHMSVIKDLVV---------DMSHFYSQHR-SIEPWLKTVSPK 149 + + L ++ +F + R +++ + + K Sbjct: 68 VVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVNVQKYWIKDTHK 127 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P K + D C++C C T C S P DS D Sbjct: 128 PHKHWGMINYDP------ALCIVCERCITVCKDKIGESALKTVPRGG--------DSVDN 173 Query: 210 FQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LNPAKAI 247 E + D + ++ C CT CP G I Sbjct: 174 SFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQYTSNI 231 Query: 248 AKIKM 252 ++K Sbjct: 232 WELKR 236 >gi|328952813|ref|YP_004370147.1| hypothetical protein Desac_1102 [Desulfobacca acetoxidans DSM 11109] gi|328453137|gb|AEB08966.1| hypothetical protein Desac_1102 [Desulfobacca acetoxidans DSM 11109] Length = 160 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 12/94 (12%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L C C C+ +CP + R ++ G R + L P L Sbjct: 24 QHLRRCFSCGICTATCPVSVIEPS-----FSPSRILRQIL------CGMRTELLASP-AL 71 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + C+ CP+ + I ++ + + Sbjct: 72 WYCLSCARCSFQCPQDVRFLDIIQGLRHLAVREG 105 >gi|325958075|ref|YP_004289541.1| NADP-dependent oxidoreductase domain-containing protein [Methanobacterium sp. AL-21] gi|325329507|gb|ADZ08569.1| NADP-dependent oxidoreductase domain protein [Methanobacterium sp. AL-21] Length = 383 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 6/120 (5%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + KE+++ + Y C C C CP D Sbjct: 266 QNLETADQGYPNSLSSEEKEIIREVKSVYSQRKQYNCTQCGYCVP-CPQ---GVDIPANL 321 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L AY + D + +++ R C C + CP+ + KA+ ++ Sbjct: 322 LQLNNAY--MFQDEDNAKMNYYMGVKEEERAVNCTGCGECEKICPQMVPIQKALMDVRKK 379 >gi|119357074|ref|YP_911718.1| CoB--CoM heterodisulfide reductase [Chlorobium phaeobacteroides DSM 266] gi|119354423|gb|ABL65294.1| CoB--CoM heterodisulfide reductase [Chlorobium phaeobacteroides DSM 266] Length = 502 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 13/115 (11%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + L+ + + C C C+ CP+ P + R + Sbjct: 2 PTNKPALTDALKHRIENATGNDYNCCYQCGKCTAGCPA----GSFMDNP--PARIMRLV- 54 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Q ++ L+ C CT CP+ ++ A + ++ + L I Sbjct: 55 ------QAGYIEEALKSDALWYCVGCQTCTARCPQNMDIAATMDALREIALKEDI 103 >gi|325136421|gb|EGC59029.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M0579] Length = 1306 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|323478518|gb|ADX83756.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus HVE10/4] Length = 979 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGINISVNSKRAMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ + + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIERPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|319400679|gb|EFV88904.1| formate dehydrogenase, alpha subunit [Staphylococcus epidermidis FRI909] Length = 983 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 51/194 (26%), Gaps = 29/194 (14%) Query: 60 LDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV----- 113 L + +N P + S C +C + I+G AC ++ Sbjct: 22 LLEFIRSRNTFVPAICYNESMGPIQTCDTCMVEINGDIARACGTSIESSMTVNTYNHHVK 81 Query: 114 --------YPLPHMSVIKDLVVDMSHFYSQHRSIEPW-LKTVSPKPAKELLQSHEDRQKI 164 L + + + H +++ W ++ + + ++ + Sbjct: 82 TSQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDKWGIQHQTYEYKRKPYEKDYGPFYR 141 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C++C C +C N + W D Sbjct: 142 YDPNQCILCGRCVEACQDVEVNETIRIDWERDHPRVIWDNDVPINES------------- 188 Query: 225 YRCHTIMNCTQSCP 238 C + C CP Sbjct: 189 -SCVSCGQCATVCP 201 >gi|304387695|ref|ZP_07369878.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis ATCC 13091] gi|304338264|gb|EFM04391.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis ATCC 13091] Length = 1306 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|161869910|ref|YP_001599079.1| oxidoreductase [Neisseria meningitidis 053442] gi|161595463|gb|ABX73123.1| oxidoreductase [Neisseria meningitidis 053442] Length = 1306 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 901 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 933 >gi|119473030|ref|ZP_01614852.1| electron transport complex protein RnfC [Alteromonadales bacterium TW-7] gi|119444608|gb|EAW25920.1| electron transport complex protein RnfC [Alteromonadales bacterium TW-7] Length = 780 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 31/174 (17%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV-IKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++ G ++K + P+P V + ++ + + I+ ++ Sbjct: 303 TIHKPGNVWALLGTEIKHLLDCQGFSPVPQQRVVMGGPMMGFTLPTVRIGVIKTTNCILA 362 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P + E C+ C+ C+ +CP+ ++L Q +W S+ Sbjct: 363 PDHKELAEPGPEKA--------CIRCSACADACPA-----------SLLPQQLQWFAKSK 403 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 + D L+ L+ C C CP + + A +IK ++ Sbjct: 404 E------YDKLQ-EHNLFDCIECGACAYVCPSEIPLVQYYRVAKVEIKEQQAEK 450 >gi|323475906|gb|ADX86512.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus REY15A] Length = 979 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGINISVNSKRAMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ + + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIERPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|308389563|gb|ADO31883.1| putative oxidoreductase [Neisseria meningitidis alpha710] gi|325130158|gb|EGC52937.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis OX99.30304] Length = 1277 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|225075335|ref|ZP_03718534.1| hypothetical protein NEIFLAOT_00338 [Neisseria flavescens NRL30031/H210] gi|224953510|gb|EEG34719.1| hypothetical protein NEIFLAOT_00338 [Neisseria flavescens NRL30031/H210] Length = 1277 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELADI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 904 >gi|153833749|ref|ZP_01986416.1| formate dehydrogenase, alpha subunit [Vibrio harveyi HY01] gi|148869921|gb|EDL68884.1| formate dehydrogenase, alpha subunit [Vibrio harveyi HY01] Length = 1412 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RY 190 F Q +S + WL + + C+ C C +C + + Sbjct: 597 FSLQVKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNF 656 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A R L + D C C Q CP G Sbjct: 657 VCDKQGRPALRPDDRPHFGSNKNGLTLMGDS----NCVQCGACVQVCPTG 702 >gi|84496271|ref|ZP_00995125.1| putative oxidoreductase [Janibacter sp. HTCC2649] gi|84383039|gb|EAP98920.1| putative oxidoreductase [Janibacter sp. HTCC2649] Length = 943 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLG 192 + I P ++ + SH+ + CV C + CPSY D Sbjct: 497 QGIRPGPGGLTFELTPVHALSHDAGSFAGAMNRCVGVGLCRSDVGSMCPSYQVTRDEVHS 556 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +A ++ R E + + E L C + C CP ++ Sbjct: 557 TRGRARALAEML--RGESVTDGWRSKETLEALDLCLSCKACASECPVNVD 604 >gi|331091237|ref|ZP_08340078.1| hypothetical protein HMPREF9477_00721 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404684|gb|EGG84223.1| hypothetical protein HMPREF9477_00721 [Lachnospiraceae bacterium 2_1_46FAA] Length = 444 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 18/111 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 K + +L +D K + C+ C C CPS I+ L + Sbjct: 350 TKTSSSILGFTKDEVKANEPTACINCGRCVEVCPS-----------RIIPSRLADLAERH 398 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 DE ++L+ LE C +C+ CP ++I ++ + L + Sbjct: 399 DEEGFKKLEGLE-------CIECGSCSYVCPAKRQLKQSIGTMRKIALANR 442 >gi|56478214|ref|YP_159803.1| electron transport complex protein RnfC [Aromatoleum aromaticum EbN1] gi|56314257|emb|CAI08902.1| putative electron transport complex protein [Aromatoleum aromaticum EbN1] Length = 547 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ + Y + L+ C Sbjct: 367 CIRCGACARACPADLQPFELYWFSRAKNVGKA------------------QEYHLFDCIE 408 Query: 230 IMNCTQSCPKGLNPAK 245 +C CP + Sbjct: 409 CGSCAFVCPSHIPLVD 424 >gi|50121206|ref|YP_050373.1| electron transport complex protein RnfC [Pectobacterium atrosepticum SCRI1043] gi|81693263|sp|Q6D4W2|RNFC_ERWCT RecName: Full=Electron transport complex protein rnfC; AltName: Full=Nitrogen fixation protein rnfC gi|49611732|emb|CAG75181.1| electron transport complex protein [Pectobacterium atrosepticum SCRI1043] Length = 693 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y SR + + D L+ C Sbjct: 377 CIRCSKCADACPAGLLPQQLYWF-------------SRGQEHEKARD-----HHLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|330015738|ref|ZP_08308240.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella sp. MS 92-3] gi|328531063|gb|EGF57918.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella sp. MS 92-3] Length = 565 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 332 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 379 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + IA I+ Sbjct: 380 ------DCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 414 >gi|295130351|ref|YP_003581014.1| putative Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing protein [Propionibacterium acnes SK137] gi|291375330|gb|ADD99184.1| putative Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing protein [Propionibacterium acnes SK137] Length = 734 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTKCPVHINTGDLVRRLRAE 627 >gi|262044609|ref|ZP_06017664.1| electron transport complex protein RnfC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038010|gb|EEW39226.1| electron transport complex protein RnfC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 582 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + IA I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|255019763|ref|ZP_05291840.1| CoB--CoM heterodisulfide reductase subunit C [Acidithiobacillus caldus ATCC 51756] gi|254970831|gb|EET28316.1| CoB--CoM heterodisulfide reductase subunit C [Acidithiobacillus caldus ATCC 51756] Length = 239 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 11/103 (10%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + + ++ C C C+ SC Y N D P + Sbjct: 34 MISPRTLTDYEPDFEKIIQSYSGGENVHRCWQCGSCTNSCTMYAQNVD--FNPRYWIYLI 91 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R + + + ++D +++C + CT CPK + P Sbjct: 92 RLGL---------KAELMKDKDIIWQCVSCNKCTNICPKDVRP 125 >gi|225620587|ref|YP_002721844.1| electron transport complex protein [Brachyspira hyodysenteriae WA1] gi|225215406|gb|ACN84140.1| electron transport complex protein [Brachyspira hyodysenteriae WA1] Length = 435 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 19/123 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + P L+ K LL +D+ + Y C+ C C +CP + ++ Sbjct: 332 MMGAAIPNLEQCVNKGTNSLLFLDKDKLAKEVEYPCIKCGRCGNACPLHLSPTE------ 385 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L + + + D L D + C CT CP + + I + L Sbjct: 386 --------LAHT---AKAKIKDKLNDLD-IATCFECGCCTYICPSKIPLVQWI-RFGKDL 432 Query: 255 LDR 257 L R Sbjct: 433 LRR 435 >gi|71907126|ref|YP_284713.1| electron transport complex, RnfABCDGE type, C subunit [Dechloromonas aromatica RCB] gi|71846747|gb|AAZ46243.1| Electron transport complex, RnfABCDGE type, C subunit [Dechloromonas aromatica RCB] Length = 503 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 22/92 (23%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 C+ C C+ +CP +G L A R R+ +LE Sbjct: 367 PEAGPCIRCGNCTKACP---------MGLLPLEMAARI-----------RVGDLEGAEAF 406 Query: 224 -LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C + C CP + + + K L Sbjct: 407 ALSDCISCGCCAYVCPSHIPLVQYFSHAKGEL 438 >gi|15679150|ref|NP_276267.1| formate dehydrogenase, beta subunit related protein FlpB [Methanothermobacter thermautotrophicus str. Delta H] gi|2622244|gb|AAB85628.1| formate dehydrogenase, beta subunit related protein FlpB [Methanothermobacter thermautotrophicus str. Delta H] Length = 383 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 31/249 (12%) Query: 22 TGEKNLKEYRIYRWNPDNKGNPCMDT--YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS 79 + + ++ + Y +PD+ +D + V+L + + + Y++ + Sbjct: 133 SAREMIETF--YEIDPDDVVREEIDKGKFIVELKDGSHKEI-SIDYLEEEG--------F 181 Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD------LVVD--MS 130 R C C + + +AC ++ I V +I+ L V Sbjct: 182 GRRENCQRCELMVPRNADIACGNWGAEEGWTFIEVNTDRGEEIIEGARREGYLEVKEPPM 241 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSD 188 IE + ++ K + L+ Y C+ C C CP + Sbjct: 242 KMIEIREKIENAMIKMARKFQDKYLEDEYPSLDDWDEYWKRCINCFACRDLCPICFCREC 301 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L LL++ D FQG RL ++ + C C CP + A+ Sbjct: 302 E-LEKDYLLESDEKAPDPL-TFQGVRLSHMG-----FSCINCGQCEDVCPMDIPLARIYH 354 Query: 249 KIKMMLLDR 257 +I+ DR Sbjct: 355 RIQRKYRDR 363 >gi|194334122|ref|YP_002015982.1| electron transport complex, RnfABCDGE type subunit C [Prosthecochloris aestuarii DSM 271] gi|194311940|gb|ACF46335.1| electron transport complex, RnfABCDGE type, C subunit [Prosthecochloris aestuarii DSM 271] Length = 441 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 37/216 (17%) Query: 60 LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM 119 L + + + L + C G+ + + + + + ++ Sbjct: 241 LINAITGRTIEEGELPFDKGCLVQNIGTAVAIYEAVCMNKPLIERVLTVSGMEIGQRKNI 300 Query: 120 S-----VIKDLVVDMSHFYSQHRSIEPWLKTVSP----------KPAKELLQSHEDRQKI 164 KDL+ + ++ I + K +L + + Sbjct: 301 MARVGTTFKDLIAFCDNMSAKTNQIISGGPMMGKAIFSLDVPVVKTTSGILFLNNTALEK 360 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C CP + LGP + R D + Sbjct: 361 SKERTCIRCGKCVDVCP-------QGLGPWLLANVAQMREFDD-------------IQLY 400 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C +CT CP I K ++ +R+ Sbjct: 401 GLANCTECGSCTFVCPSKRELVHWIKYAKALVNNRQ 436 >gi|327332190|gb|EGE73927.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Propionibacterium acnes HL096PA3] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|327330635|gb|EGE72381.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Propionibacterium acnes HL097PA1] Length = 947 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|317485060|ref|ZP_07943942.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923595|gb|EFV44799.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 429 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 16/93 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLDNL 218 D L C+ C C CP + + A+ + D + + Sbjct: 15 DDKLASCMKCGFCQAFCPVFDTTGKEGDVTRGKIALVENLAHLIIQDP---------EAV 65 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +L RC C SCP G+ + + + Sbjct: 66 N--EKLSRCLLCGGCQFSCPSGVPTLEIFMEAR 96 >gi|315108216|gb|EFT80192.1| FAD linked oxidase protein [Propionibacterium acnes HL030PA2] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|315107097|gb|EFT79073.1| FAD linked oxidase protein [Propionibacterium acnes HL030PA1] Length = 792 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 384 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 439 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 440 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 472 >gi|315084570|gb|EFT56546.1| FAD linked oxidase protein [Propionibacterium acnes HL027PA2] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|314968102|gb|EFT12201.1| FAD linked oxidase protein [Propionibacterium acnes HL037PA1] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|314958393|gb|EFT02496.1| FAD linked oxidase protein [Propionibacterium acnes HL002PA1] Length = 748 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|314918564|gb|EFS82395.1| FAD linked oxidase protein [Propionibacterium acnes HL050PA1] gi|314919827|gb|EFS83658.1| FAD linked oxidase protein [Propionibacterium acnes HL050PA3] gi|327451034|gb|EGE97688.1| FAD linked oxidase protein [Propionibacterium acnes HL087PA3] gi|328753067|gb|EGF66683.1| FAD linked oxidase protein [Propionibacterium acnes HL087PA1] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|313838479|gb|EFS76193.1| FAD linked oxidase protein [Propionibacterium acnes HL086PA1] Length = 564 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 369 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 424 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 425 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 457 >gi|313827843|gb|EFS65557.1| FAD linked oxidase protein [Propionibacterium acnes HL063PA2] Length = 541 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 346 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 401 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 402 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 434 >gi|313818310|gb|EFS56024.1| FAD linked oxidase protein [Propionibacterium acnes HL046PA2] gi|313820072|gb|EFS57786.1| FAD linked oxidase protein [Propionibacterium acnes HL036PA1] gi|313823119|gb|EFS60833.1| FAD linked oxidase protein [Propionibacterium acnes HL036PA2] gi|314925495|gb|EFS89326.1| FAD linked oxidase protein [Propionibacterium acnes HL036PA3] gi|314960253|gb|EFT04355.1| FAD linked oxidase protein [Propionibacterium acnes HL002PA2] gi|315085907|gb|EFT57883.1| FAD linked oxidase protein [Propionibacterium acnes HL002PA3] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|313813189|gb|EFS50903.1| FAD linked oxidase protein [Propionibacterium acnes HL025PA1] Length = 792 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 384 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 439 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 440 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 472 >gi|313764715|gb|EFS36079.1| FAD linked oxidase protein [Propionibacterium acnes HL013PA1] gi|313772536|gb|EFS38502.1| FAD linked oxidase protein [Propionibacterium acnes HL074PA1] gi|313791766|gb|EFS39877.1| FAD linked oxidase protein [Propionibacterium acnes HL110PA1] gi|313802148|gb|EFS43380.1| FAD linked oxidase protein [Propionibacterium acnes HL110PA2] gi|313807264|gb|EFS45751.1| FAD linked oxidase protein [Propionibacterium acnes HL087PA2] gi|313809770|gb|EFS47491.1| FAD linked oxidase protein [Propionibacterium acnes HL083PA1] gi|313815781|gb|EFS53495.1| FAD linked oxidase protein [Propionibacterium acnes HL059PA1] gi|313825604|gb|EFS63318.1| FAD linked oxidase protein [Propionibacterium acnes HL063PA1] gi|313830680|gb|EFS68394.1| FAD linked oxidase protein [Propionibacterium acnes HL007PA1] gi|313833899|gb|EFS71613.1| FAD linked oxidase protein [Propionibacterium acnes HL056PA1] gi|314915207|gb|EFS79038.1| FAD linked oxidase protein [Propionibacterium acnes HL005PA4] gi|314931842|gb|EFS95673.1| FAD linked oxidase protein [Propionibacterium acnes HL067PA1] gi|314955998|gb|EFT00396.1| FAD linked oxidase protein [Propionibacterium acnes HL027PA1] gi|314963064|gb|EFT07164.1| FAD linked oxidase protein [Propionibacterium acnes HL082PA1] gi|314973681|gb|EFT17777.1| FAD linked oxidase protein [Propionibacterium acnes HL053PA1] gi|314976275|gb|EFT20370.1| FAD linked oxidase protein [Propionibacterium acnes HL045PA1] gi|314978240|gb|EFT22334.1| FAD linked oxidase protein [Propionibacterium acnes HL072PA2] gi|314983516|gb|EFT27608.1| FAD linked oxidase protein [Propionibacterium acnes HL005PA1] gi|314987704|gb|EFT31795.1| FAD linked oxidase protein [Propionibacterium acnes HL005PA2] gi|314990183|gb|EFT34274.1| FAD linked oxidase protein [Propionibacterium acnes HL005PA3] gi|315077527|gb|EFT49585.1| FAD linked oxidase protein [Propionibacterium acnes HL053PA2] gi|315080312|gb|EFT52288.1| FAD linked oxidase protein [Propionibacterium acnes HL078PA1] gi|315088675|gb|EFT60651.1| FAD linked oxidase protein [Propionibacterium acnes HL072PA1] gi|315096302|gb|EFT68278.1| FAD linked oxidase protein [Propionibacterium acnes HL038PA1] gi|315098284|gb|EFT70260.1| FAD linked oxidase protein [Propionibacterium acnes HL059PA2] gi|315101025|gb|EFT73001.1| FAD linked oxidase protein [Propionibacterium acnes HL046PA1] gi|327325937|gb|EGE67727.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Propionibacterium acnes HL096PA2] gi|327442812|gb|EGE89466.1| FAD linked oxidase protein [Propionibacterium acnes HL013PA2] gi|327446183|gb|EGE92837.1| FAD linked oxidase protein [Propionibacterium acnes HL043PA2] gi|327447835|gb|EGE94489.1| FAD linked oxidase protein [Propionibacterium acnes HL043PA1] gi|327452885|gb|EGE99539.1| FAD linked oxidase protein [Propionibacterium acnes HL092PA1] gi|327453613|gb|EGF00268.1| FAD linked oxidase protein [Propionibacterium acnes HL083PA2] gi|328753722|gb|EGF67338.1| FAD linked oxidase protein [Propionibacterium acnes HL020PA1] gi|328759188|gb|EGF72804.1| FAD linked oxidase protein [Propionibacterium acnes HL025PA2] gi|328760566|gb|EGF74134.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Propionibacterium acnes HL099PA1] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|289427838|ref|ZP_06429544.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes J165] gi|289158970|gb|EFD07168.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes J165] Length = 673 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 627 >gi|227326453|ref|ZP_03830477.1| electron transport complex protein RnfC [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 684 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 29/152 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V K +V M ++ + L SH + + + C+ C+ C+ Sbjct: 326 GFHVNKQPMVVMGGPL-MGFTLPSLDVPIVKISNCLLAPSHTEMEPVAEEQSCIRCSKCA 384 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ Y SR + + + L+ C C C Sbjct: 385 DACPAGLLPQQLYWF-------------SRGQEHEKARN-----HHLFDCIECGACAYVC 426 Query: 238 PKGLNPAK----------AIAKIKMMLLDRKI 259 P + + AI + K+ Sbjct: 427 PSNIPLVQYYRQEKAEIRAIDEEAQRAAQAKV 458 >gi|227111414|ref|ZP_03825070.1| electron transport complex protein RnfC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 753 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 29/152 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V K +V M ++ + L SH + + + C+ C+ C+ Sbjct: 326 GFHVNKQPMVVMGGPL-MGFTLPSLDVPIVKISNCLLAPSHTEMEPVAEEQSCIRCSKCA 384 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ Y SR + + + L+ C C C Sbjct: 385 DACPAGLLPQQLYWF-------------SRGQEHEKARN-----HHLFDCIECGACAYVC 426 Query: 238 PKGLNPAK----------AIAKIKMMLLDRKI 259 P + + AI + K+ Sbjct: 427 PSNIPLVQYYRQEKAEIRAIDEEAQRAAQAKV 458 >gi|50842262|ref|YP_055489.1| oxidoreductase, putative D-lactate dehydrogenase [Propionibacterium acnes KPA171202] gi|50839864|gb|AAT82531.1| oxidoreductase, putative D-lactate dehydrogenase [Propionibacterium acnes KPA171202] Length = 809 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 401 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 456 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP +N + +++ Sbjct: 457 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLRAE 489 >gi|225848280|ref|YP_002728443.1| oxido/reductase iron sulfur protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644025|gb|ACN99075.1| oxido/reductase iron sulfur protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 418 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 6/104 (5%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + E + I+ ++CV C+ C CP+Y + P L ++D + Sbjct: 1 MSHYIEPKLTIELAHQCVKCSACRQVCPTYSVVKEERSSPRGRLALAEAVVDGILPLTED 60 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C CP + + + + + M ++ Sbjct: 61 IAAQWNQ------CAMCRRCEWICPNEVEYKEIMFRARNMAKEK 98 >gi|222053325|ref|YP_002535687.1| CoB--CoM heterodisulfide reductase [Geobacter sp. FRC-32] gi|221562614|gb|ACM18586.1| CoB--CoM heterodisulfide reductase [Geobacter sp. FRC-32] Length = 387 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 15/86 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C + CP WN R +++ + L +E ++R Sbjct: 26 LKYCYQCGLCDSVCP---WNRVRKFSMRKIVRQGTFG-----------LTEIEQED-IWR 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C T C CP+G+N +A ++ Sbjct: 71 CSTCGTCPSRCPRGVNQIEAGVAMRK 96 >gi|110637429|ref|YP_677636.1| ferrodoxin [Cytophaga hutchinsonii ATCC 33406] gi|110280110|gb|ABG58296.1| possible ferrodoxin [Cytophaga hutchinsonii ATCC 33406] Length = 456 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 29/110 (26%), Gaps = 17/110 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDE 209 + + C+ C C CP Y + Y GP + Sbjct: 295 RTNLMVDPEKRQALNCIRCGACLNICPVYRNIGGHTYASTYSGPIGSVITPHL------- 347 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E+ +L L CT CP ++ + + + + Sbjct: 348 EGMEKFKHLSYASSL-----CGACTSVCPVKIDIHNLLLLNRNQSVKEGL 392 >gi|309389502|gb|ADO77382.1| electron transport complex, RnfABCDGE type, C subunit [Halanaerobium praevalens DSM 2228] Length = 441 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + L + K +L E + C+ CA C +CP +L P Sbjct: 332 MMGAAQKNLNIPAVKGTSGILVLIESEVEAYEPSPCINCAKCVDACPM-------FLMPT 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ + E ++ + D +++ C +C CP + + K + Sbjct: 385 QLVNY----------QKSEMVEEMND-WQIMSCIECGSCAYVCPAKIPLVHYLRLGKAQV 433 Query: 255 LDRK 258 + +K Sbjct: 434 MAKK 437 >gi|291563596|emb|CBL42412.1| electron transport complex, RnfABCDGE type, C subunit [butyrate-producing bacterium SS3/4] Length = 442 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +D+ + C+ C C CP + P I++ A D E+L+ Sbjct: 355 FTKDQVAANPESPCIRCGRCIDVCPEHIV-------PQIMMGAAERN----DLALFEKLN 403 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +E C +CT CP +A +++ ++ + Sbjct: 404 GME-------CCECGSCTFICPAHRPLTQAFKEMRKAVMAAR 438 >gi|284998992|ref|YP_003420760.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus L.D.8.5] gi|284446888|gb|ADB88390.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus L.D.8.5] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|227828716|ref|YP_002830496.1| formate dehydrogenase, subunit alpha [Sulfolobus islandicus M.14.25] gi|227460512|gb|ACP39198.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus M.14.25] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|332305735|ref|YP_004433586.1| electron transport complex, RnfABCDGE type, C subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173064|gb|AEE22318.1| electron transport complex, RnfABCDGE type, C subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 862 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ L P L + + LD +D + L+ C Sbjct: 386 PCIRCSACADACPAS-------LLPQQLFWH----------SKAKELDKAQD-YNLFDCI 427 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 428 ECGACAYVCPSEIPLVH 444 >gi|229585934|ref|YP_002844436.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus M.16.27] gi|228020984|gb|ACP56391.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus M.16.27] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|218264976|ref|ZP_03478600.1| hypothetical protein PRABACTJOHN_04310 [Parabacteroides johnsonii DSM 18315] gi|218221644|gb|EEC94294.1| hypothetical protein PRABACTJOHN_04310 [Parabacteroides johnsonii DSM 18315] Length = 927 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLEDPF-- 222 + C+ C C CP+ + P + YR L + R E R L+ F Sbjct: 521 IDRCIECGFCEVQCPARNLT----ITPRQRIVIYRTLSAMAERGETGTPRYAGLKKAFQY 576 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G+N I +++ Sbjct: 577 KGNETCATDGLCGTACPVGINTGLLIKELR 606 >gi|167630079|ref|YP_001680578.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167592819|gb|ABZ84567.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 323 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 23/95 (24%), Gaps = 9/95 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP+ + W+ + Sbjct: 204 AFWQSQNEKCIRCYACRNICPACNCRECIFDSDKKN-----WVNKAATPTDNAFFGITRA 258 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RC C + CP + I + L+ Sbjct: 259 MHVAGRCVECGECERVCPMDIP----IMAMNRKLI 289 >gi|160887222|ref|ZP_02068225.1| hypothetical protein BACOVA_05239 [Bacteroides ovatus ATCC 8483] gi|260171475|ref|ZP_05757887.1| heterodisulfide reductase subunit C [Bacteroides sp. D2] gi|156107633|gb|EDO09378.1| hypothetical protein BACOVA_05239 [Bacteroides ovatus ATCC 8483] Length = 184 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 10/100 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + +++ + C C C+ C R L+ +++ Sbjct: 6 CISYDLEQKTGIDVSYCYQCGKCTAGCVLSEEMD------YAPSYILR-LLQTKNAQNDR 58 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + ++ C NC CPK +N + + ++ Sbjct: 59 R---VLSSNAIWICLNCENCIARCPKEINIPEVMDYLREK 95 >gi|78045211|ref|YP_359779.1| putative dehydrogenase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|77997326|gb|ABB16225.1| putative dehydrogenase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 317 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 9/102 (8%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + R +C+ C C C + + A + S + Sbjct: 195 EKSRYWDKQFEKCIRCYACRNVCSACNCRDCVFD-MAEPNWVGKAANLSENTA----FHL 249 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMMLL 255 + RC C++ CP G+ K I +K + Sbjct: 250 IRAWHVAGRCVDCGECSRVCPMGIPVNTLNRKMIKDMKELFA 291 >gi|291550297|emb|CBL26559.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus torques L2-14] Length = 439 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 24/127 (18%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + K + +L ED C+ C C CPS Sbjct: 331 MMGFAMVTMDAPVTKTSSSILLFKEDVVAKSLETACINCGRCVEICPS------------ 378 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR---CHTIMNCTQSCPKGLNPAKAIAKIK 251 R + SR +R D F + C +C+ CP +AI ++ Sbjct: 379 ------RIIP-SRLADFSKRKDEA--SFVAWNGLECVECGSCSYVCPAKRQLKQAIGSMR 429 Query: 252 MMLLDRK 258 L + Sbjct: 430 KTALANR 436 >gi|229580377|ref|YP_002838777.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus Y.G.57.14] gi|228011093|gb|ACP46855.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus Y.G.57.14] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|261381149|ref|ZP_05985722.1| cytochrome c oxidase accessory protein CcoG [Neisseria subflava NJ9703] gi|284795956|gb|EFC51303.1| cytochrome c oxidase accessory protein CcoG [Neisseria subflava NJ9703] Length = 494 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 5/89 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R Sbjct: 220 FMTFFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE---RGEPRGARKKTANKE 275 Query: 222 F-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 276 DSGLGDCINCTMCVQVCPVGIDIRDGLQY 304 >gi|55378691|ref|YP_136541.1| glycolate oxidase subunit GlcD [Haloarcula marismortui ATCC 43049] gi|55231416|gb|AAV46835.1| glycolate oxidase subunit GlcD [Haloarcula marismortui ATCC 43049] Length = 1012 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 61/220 (27%), Gaps = 22/220 (10%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM-KDIKGA 110 L+ ++ + I + + + G G + T + + Sbjct: 470 LNLKEESGIEDMHSITDDVTDLVLEHNGSFSGEHGDGMARTEFTPKMYGETLWDAFKQVK 529 Query: 111 IAVYP----LPHMSVIKDLVVDMSHFYSQ-----HRSIEPWLKTVSPKPAKELLQSHEDR 161 A P P V +D D+ + R + + L ++ Sbjct: 530 TAFDPQWWMHPGNVVYRDGPADIGPDADRGVGADMRENLRYGPDYQSLEPQTTLDFEDEG 589 Query: 162 QKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGE 213 + + C C C + CP+Y + + R I DE + Sbjct: 590 GFSELVELCNGCGTCRQTDGDVMCPTYRASEEEVQTTRGRANLLRSAISGDLDEDEIHSD 649 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L C C CP G++ AK ++K Sbjct: 650 RFQ----EEVLDLCVGCKGCKSDCPTGVDMAKLKTELKHQ 685 >gi|239995716|ref|ZP_04716240.1| iron-sulfur cluster-binding protein FixG [Alteromonas macleodii ATCC 27126] Length = 457 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 7/123 (5%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V MS+FY R + +P + C+ CP + Sbjct: 167 VFMSYFYPASRLYTEFFTFSAPALISGWTMFF--AVCTYANAGWLREKMCTHMCPYSRFQ 224 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + L+ ++R E +G R + L C C Q CP G++ + Sbjct: 225 AAMFDNSTSLVT----YNETRGESRGPRKRFSQHKD-LGDCVDCNLCVQVCPAGIDIREG 279 Query: 247 IAK 249 I Sbjct: 280 IQY 282 >gi|171464180|ref|YP_001798293.1| FAD linked oxidase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193718|gb|ACB44679.1| FAD linked oxidase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 1279 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 29/218 (13%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +D + L RS I G G+ I L + Sbjct: 699 NIPVNSDDYEMLQDAHRA---VDRIMKLARSLDGVISGEHGIGITKLEYLTEAELKDFRS 755 Query: 109 GAIAVYPLPHM-----SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 V P DL + + + ++ Sbjct: 756 YKNRVDPEGRFNKGKLMPHADLSMAYTPSFGLMGHESIIMQQSDIGAI------------ 803 Query: 164 IDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D + +C+ C C C ++ + D+ LG ++L++A+ + +R + Sbjct: 804 ADSVKDCLRCGKCKPVCSTHVPRANLLYSPRDKILGTSLLIEAFLYEEQTRRGVSIRHWE 863 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +D C C CP ++ ++ +L Sbjct: 864 MFDDVAA--HCTVCHKCLTPCPVKIDFGDVTMNMRNLL 899 >gi|302389136|ref|YP_003824957.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermosediminibacter oceani DSM 16646] gi|302199764|gb|ADL07334.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermosediminibacter oceani DSM 16646] Length = 441 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 ++ + C C C+ CP Y + R + Sbjct: 232 DGAFPHISRRARMEVLLKRAKAACCQCRICTDMCPRYLLGHS-----LEPHRIMRTVSYG 286 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++L C C +CP GL+P + +++K +L +++I Sbjct: 287 LPD-TEAVKNSLL-------CSECGLCEITCPMGLSPRRINSRLKRLLQEKRI 331 >gi|258541483|ref|YP_003186916.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256632561|dbj|BAH98536.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256635618|dbj|BAI01587.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-03] gi|256638673|dbj|BAI04635.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-07] gi|256641727|dbj|BAI07682.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-22] gi|256644782|dbj|BAI10730.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-26] gi|256647837|dbj|BAI13778.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-32] gi|256650890|dbj|BAI16824.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653881|dbj|BAI19808.1| iron-sulfur binding oxidoreductase [Acetobacter pasteurianus IFO 3283-12] Length = 467 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 13/153 (8%) Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + + + L ++ + +HF + E + V + L Q Sbjct: 245 PRMADMGVFIRLLSRSALGSPITQYTTHFRGPQKGSEMHVVLVDNGRSHRL-----GMQD 299 Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C +CP Y + G + D ER + Sbjct: 300 FWTSLKCIRCGACMNTCPVYRRSGGLSYGAVYSGPIGAII----DPTFNERKYSTLP--- 352 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +CT CP +N + + K + +L + Sbjct: 353 -FASTMNGSCTNVCPVKINIHEQLYKWRRVLAE 384 >gi|254446706|ref|ZP_05060181.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Verrucomicrobiae bacterium DG1235] gi|198256131|gb|EDY80440.1| electron transport complex, RnfABCDGE type, C subunit subfamily [Verrucomicrobiae bacterium DG1235] Length = 456 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 17/81 (20%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ C C +CP + L P L + + D ++ F L Sbjct: 377 RTSHPCISCGACVEACPMH-------LNPCQLGRLAY----------KSQYDEMQSSFHL 419 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C +C+ CP + + Sbjct: 420 NDCFECGSCSYVCPSSIPLVQ 440 >gi|91065090|gb|ABE03922.1| NuoI [Theonella swinhoei bacterial symbiont clone pSW1H8] Length = 145 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 15/123 (12%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + + V + + + ++ + V+ +P R GL +C+ C+ C+ Sbjct: 4 FDIARGMGVTLGQLFKRPITVRYPEQPVALEPRFRGRHHL-LRHPDTGLEKCIGCSLCAA 62 Query: 179 SCPSYWWNSDRYLG-PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+Y + P + A GER ++ + L RC C ++C Sbjct: 63 ACPAYAIYVEAAENDPEAPVSA------------GERYASIYEINML-RCIFCGLCEEAC 109 Query: 238 PKG 240 P G Sbjct: 110 PTG 112 >gi|308799163|ref|XP_003074362.1| oxidoreducta (ISS) [Ostreococcus tauri] gi|116000533|emb|CAL50213.1| oxidoreducta (ISS) [Ostreococcus tauri] Length = 790 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 14/120 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--- 203 + P + C+ C C ++CP+ D L P + YR + Sbjct: 351 NRDPHVHEKNLKPKPVADPIVDMCMECGFCESNCPTR----DVSLTPRQRITVYREISRL 406 Query: 204 ----IDSRDEFQGERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIKMMLLD 256 +R + + +RL+ D F T C CP G+N + + I+ ++ Sbjct: 407 QGIEAGARTKEEQDRLNEFLDIFAYAGNSTCAADGMCEVKCPVGINTGELVKSIRAREME 466 >gi|295092330|emb|CBK78437.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium cf. saccharolyticum K10] Length = 441 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 18/103 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +D C+ C C CP + L P ++++A E+ Sbjct: 355 TFTKDEVAAQAPSPCIRCGRCVDVCPEH-------LVPPLMMKAALDNN-------LEKF 400 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP +A +++ + + Sbjct: 401 QQLNGME----CVECGCCAYTCPAKRPLTQAFKEMRKAVAASR 439 >gi|229580988|ref|YP_002839387.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus Y.N.15.51] gi|228011704|gb|ACP47465.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus Y.N.15.51] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLIEVNGKLVRACSTRVKDGMNISVNSKRSMEARKNAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|118497733|ref|YP_898783.1| 4Fe-4S ferredoxin, FAD dependent [Francisella tularensis subsp. novicida U112] gi|194323705|ref|ZP_03057481.1| FAD/FMN-containing dehydrogenase [Francisella tularensis subsp. novicida FTE] gi|118423639|gb|ABK90029.1| 4Fe-4S ferredoxin, FAD dependent [Francisella novicida U112] gi|194322069|gb|EDX19551.1| FAD/FMN-containing dehydrogenase [Francisella tularensis subsp. novicida FTE] Length = 906 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D++ + + + + ++I ++ + E D + +C+ C C CPS Sbjct: 494 DIMWQIKNLFDK-QNILNPDVKLTRDTSLHTKNLKELNSVDDQIDKCMECGYCEPVCPSR 552 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + L P R + E + + L + D + + C T C CP ++ Sbjct: 553 NLS----LTPRQRNTVARKIETLEGEQKQQWLKDY-DYYGIQTCATTSLCKTRCPVDIDT 607 Query: 244 AKAI 247 I Sbjct: 608 GAFI 611 >gi|320354211|ref|YP_004195550.1| D-lactate dehydrogenase (cytochrome) [Desulfobulbus propionicus DSM 2032] gi|320122713|gb|ADW18259.1| D-lactate dehydrogenase (cytochrome) [Desulfobulbus propionicus DSM 2032] Length = 941 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 32/93 (34%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + +C+ C C CPS A + R L + + + +RL Sbjct: 534 PTHELVDKCIECGFCEPVCPSKNLTFTPRQRIAGRREISRRLAANAGQREVQRLIKAYRY 593 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C CP G++ K + ++ Sbjct: 594 PGMDTCAADGLCATLCPVGIDTGKMVKSLREEA 626 >gi|271968602|ref|YP_003342798.1| iron-sulfur cluster binding protein [Streptosporangium roseum DSM 43021] gi|270511777|gb|ACZ90055.1| iron-sulfur cluster binding protein [Streptosporangium roseum DSM 43021] Length = 470 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L Q + + D Sbjct: 312 RQALRCIRCSACLNVCPVYERAGGHAYGSVYPGPIGAIL-----TPQLRGMGSALDASLP 366 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C ++CP ++ + + ++ Sbjct: 367 YASTLCGACFEACPVAIDIPEVLVHLR 393 >gi|242278599|ref|YP_002990728.1| FAD linked oxidase domain protein [Desulfovibrio salexigens DSM 2638] gi|242121493|gb|ACS79189.1| FAD linked oxidase domain protein [Desulfovibrio salexigens DSM 2638] Length = 1180 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 32/95 (33%), Gaps = 15/95 (15%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-------RDEFQGE---RLDNLE 219 C C C CP ++ P A LI++ R E RL L Sbjct: 728 CTRCGKCKQVCPMFFPQEGLMYHPRNKNIALGALIEAIYYSQVQRGEPSPNLMTRLRKLM 787 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C CT CP ++ A A +I+ L Sbjct: 788 E-----HCTACGRCTSVCPIKIDSAGAALQIRSFL 817 Score = 35.1 bits (79), Expect = 8.6, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 19/72 (26%), Gaps = 14/72 (19%) Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP-------------- 238 PA R + D ++ +E + C C Q CP Sbjct: 694 PAYTFSFNRLINDLNKTAIKDKEHLMELLQNIQTCTRCGKCKQVCPMFFPQEGLMYHPRN 753 Query: 239 KGLNPAKAIAKI 250 K + I I Sbjct: 754 KNIALGALIEAI 765 >gi|89067229|ref|ZP_01154742.1| formate dehydrogenase, alpha subunit [Oceanicola granulosus HTCC2516] gi|89046798|gb|EAR52852.1| formate dehydrogenase, alpha subunit [Oceanicola granulosus HTCC2516] Length = 924 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 51/188 (27%), Gaps = 33/188 (17%) Query: 81 REGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD-------LVVDMSHFY 133 +G C +C + +DG L + + V V L Sbjct: 46 SDGNCRACMVAVDGERNLVASCI-RTPVEGMTVTTDGAREVQTRKLVMELLLADQPEQPA 104 Query: 134 SQHRSIEPWLKTVS----------PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 + RS W + L L C+ C C +C Sbjct: 105 AHDRSAHLWEMADAQGLAESRFPAMDADHVPLLDDSHVAMRVNLDACIQCGLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LN 242 N +G A + D L+DP C C Q+CP G L Sbjct: 165 QVND--VIGMAGRGHQAFPVFD------------LDDPMGDSTCVACGECVQACPTGALM 210 Query: 243 PAKAIAKI 250 PA + ++ Sbjct: 211 PASVLNEV 218 >gi|291614849|ref|YP_003525006.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] gi|291584961|gb|ADE12619.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] Length = 567 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ CP+ D Y W ++D + + + L+ C Sbjct: 367 PCIRCTRCADVCPAELQPQDLY-----------WFAKAKDFGKAQ-------EYHLFDCI 408 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 409 ECGACAYVCPSQIPLVQ 425 >gi|145219652|ref|YP_001130361.1| CoB--CoM heterodisulfide reductase [Prosthecochloris vibrioformis DSM 265] gi|145205816|gb|ABP36859.1| CoB--CoM heterodisulfide reductase [Chlorobium phaeovibrioides DSM 265] Length = 513 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 13/124 (10%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + S P L+ + C C C+ CP+ + P Sbjct: 1 MPPYQYSSVSESLLPDNGKLKQQIAEATGNDFNCCYQCGKCTAGCPA----GNFMDNP-- 54 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + R + Q ++ L+ C CT CP+ ++ A + ++ + L Sbjct: 55 PTRIMRLV-------QAGYIEEALKSDALWYCVGCQTCTARCPQNMDIAGTMDALRSLAL 107 Query: 256 DRKI 259 + I Sbjct: 108 ESGI 111 >gi|332678446|gb|AEE87575.1| Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Francisella cf. novicida Fx1] Length = 906 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 5/111 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++I ++ + E D + +C+ C C CPS + L P Sbjct: 506 QNILNPDVKLTKDTSLHTKNLKELNSVDDQIDKCMECGYCEPVCPSRNLS----LTPRQR 561 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R + E + + L + D + + C T C CP ++ I Sbjct: 562 NTVARKIETLEGEQKQQWLKDY-DYYGIQTCATTSLCKTRCPVDIDTGAFI 611 >gi|303326308|ref|ZP_07356751.1| heterodisulfide reductase, C subunit [Desulfovibrio sp. 3_1_syn3] gi|302864224|gb|EFL87155.1| heterodisulfide reductase, C subunit [Desulfovibrio sp. 3_1_syn3] Length = 194 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + Q + C C C+ CP+ ++ + Q R + D + Sbjct: 20 EAQSGQNVSTCYQCGNCTAGCPA------GFVYDRQVNQIMRGVQLGL-------KDEVL 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C + C+ CP ++ A + ++ M Sbjct: 67 NSRSIWLCLSCSTCSLRCPNNIDVAAVMETLRHMARKEG 105 >gi|301062306|ref|ZP_07202972.1| dehydrogenase, beta subunit family protein [delta proteobacterium NaphS2] gi|300443606|gb|EFK07705.1| dehydrogenase, beta subunit family protein [delta proteobacterium NaphS2] Length = 316 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C SCP + + ++ + + + D D L Sbjct: 198 FFQRLISRCIRCYACRNSCPLCYCPTC-FVDESAPQWVGKSI-DPTDTMTFHFLRAY--- 252 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RC C + CP G++ + K+ Sbjct: 253 HCAGRCTDCGACERVCPMGISMRQFTKKLNKD 284 >gi|241758504|ref|ZP_04756623.1| cytochrome c oxidase accessory protein CcoG [Neisseria flavescens SK114] gi|241321339|gb|EER57487.1| cytochrome c oxidase accessory protein CcoG [Neisseria flavescens SK114] Length = 494 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 5/89 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R Sbjct: 220 FMTFFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE---RGEPRGARKKTANKE 275 Query: 222 F-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 276 DSGLGDCINCTMCVQVCPVGIDIRDGLQY 304 >gi|239998871|ref|ZP_04718795.1| putative oxidoreductase [Neisseria gonorrhoeae 35/02] Length = 542 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 77 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 136 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 137 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 169 >gi|208779798|ref|ZP_03247142.1| FAD/FMN-containing dehydrogenase [Francisella novicida FTG] gi|208744253|gb|EDZ90553.1| FAD/FMN-containing dehydrogenase [Francisella novicida FTG] Length = 906 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D++ + + + + ++I ++ + E D + +C+ C C CPS Sbjct: 494 DIMWQIKNLFDK-QNILNPDVKLTKDTSLHTKNLKELNSVDDQIDKCMECGYCEPVCPSR 552 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + L P R + E + + L + D + + C T C CP ++ Sbjct: 553 NLS----LTPRQRNTVARKIETLEGEQKQKWLKDY-DYYGIQTCATTSLCKTRCPVDIDT 607 Query: 244 AKAI 247 I Sbjct: 608 GAFI 611 >gi|159041153|ref|YP_001540405.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157919988|gb|ABW01415.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldivirga maquilingensis IC-167] Length = 531 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 17/100 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDR-YLGPAILLQAYRWLID-----------SRDEFQGER 214 L C C C+ +CP Y + + P + R + D + R Sbjct: 107 LDYCAKCQNCAEACPIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELNARTILR 166 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L L YRC C Q+CP G++ +I+ +L Sbjct: 167 LGELA-----YRCTLCRRCVQACPLGIDNGLIAHEIRKLL 201 >gi|323701582|ref|ZP_08113254.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfotomaculum nigrificans DSM 574] gi|323533355|gb|EGB23222.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfotomaculum nigrificans DSM 574] Length = 404 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 12/95 (12%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C+ C + CP D++ GP + + + RL+ Sbjct: 4 DYRLALDNCIKCSICVSHCPVARVT-DQFAGPK----------QNGPDLERFRLEEPAAV 52 Query: 222 F-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C C CP G+ + + + + Sbjct: 53 HPSVGYCTNCKGCDVVCPSGVAVSAMNCRARGEYV 87 >gi|311695002|gb|ADP97875.1| iron-sulfur cluster-binding protein [marine bacterium HP15] Length = 476 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 9/123 (7%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + +FY I + A + ++ + C CP Y Sbjct: 182 VGYFYPIRELITDLFTLQANGWAYFWVAFFTVATYLN--AGWMREQVCLYMCP-YARFQS 238 Query: 189 RYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 P + +Y D R E +G R ++ L C C Q CP G++ Sbjct: 239 VMFDPNTRVVSY----DPNRGEPRGGRKKGVDPAEAGLGDCIDCGQCVQVCPTGIDIRDG 294 Query: 247 IAK 249 + Sbjct: 295 LQY 297 >gi|309379794|emb|CBX21570.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 162 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L V + +F+++ +I + + H R+ +G C+ C C Sbjct: 15 ELVKGLGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 73 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 113 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 114 ----TDAIVE 119 >gi|288922320|ref|ZP_06416514.1| iron-sulfur cluster binding protein [Frankia sp. EUN1f] gi|288346345|gb|EFC80680.1| iron-sulfur cluster binding protein [Frankia sp. EUN1f] Length = 505 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 19/96 (19%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP Y Y GP + + + L + D Sbjct: 342 RCIRCSACLNVCPVYERTGGHAYGSIYPGPIGAVLSPQ-------------LTGVADNPS 388 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L Y C ++CP ++ + ++ +++ Sbjct: 389 LPYASTLCGACLEACPVAIDIPSMLVHLRGRTVEQA 424 >gi|237785007|ref|YP_002905712.1| putative oxidoreductase [Corynebacterium kroppenstedtii DSM 44385] gi|237757919|gb|ACR17169.1| putative oxidoreductase [Corynebacterium kroppenstedtii DSM 44385] Length = 1004 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 32/118 (27%), Gaps = 8/118 (6%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + P + DR CV C C CPS L P Sbjct: 560 RMLNPGVIITDDPHEYVEHLKVADR-IEKVADRCVECGYCEPVCPSRNLT----LTPRQR 614 Query: 197 LQAYRWLI---DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R + + D L C C CP G+N I +++ Sbjct: 615 IVVRREIAAAKNRGDTKLATELQERWQYDGQDTCAVDGMCLTRCPVGINTGDLIRQLR 672 >gi|225572308|ref|ZP_03781172.1| hypothetical protein RUMHYD_00602 [Blautia hydrogenotrophica DSM 10507] gi|225040190|gb|EEG50436.1| hypothetical protein RUMHYD_00602 [Blautia hydrogenotrophica DSM 10507] Length = 944 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 30/188 (15%) Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKDMKD---------IKGAIAVYPLP 117 + P G C C ++G +L AC + ++ + L Sbjct: 39 ERMPAKHCSNCSEYGDCKICSCEVEGEVSLLTACNTEAREGMVVWTESEEVKKARIGILN 98 Query: 118 HMSVIK--DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVM 172 M D + + + + +D R + +C+ Sbjct: 99 RMIATHPLDCMNCRKLGACKLQKYCEMYGVKEAQYVVPYEHREKDTSNRFYYQEMDKCIR 158 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C +C L A + + D C + N Sbjct: 159 CGKCVRTC--RELVGINALAMAQRGAVAYVVPNGGDTMAET------------ACVSCGN 204 Query: 233 CTQSCPKG 240 C CP G Sbjct: 205 CVSVCPVG 212 >gi|228996507|ref|ZP_04156146.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock3-17] gi|228763139|gb|EEM12047.1| Uncharacterized electron transport protein ykgF [Bacillus mycoides Rock3-17] Length = 471 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L Y Sbjct: 308 QCIRCAACVNVCPVYRHVGGHSYGSIYSGPIGAVL--------TPLLGGYDDYKELPYAS 359 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + ++++ Sbjct: 360 SLCGACTEACPVKIPLHGLLLKHRQVIVEE 389 >gi|297204464|ref|ZP_06921861.1| FAD binding oxidoreductase [Streptomyces sviceus ATCC 29083] gi|197715794|gb|EDY59828.1| FAD binding oxidoreductase [Streptomyces sviceus ATCC 29083] Length = 868 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 7/103 (6%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQA 199 E H++ + CV C + CPSY + + Sbjct: 435 HQIQPLPTEFTFPHDEEGFAGAVRRCVGVGRCRSDAGGVMCPSYRATGEENDSTRGRARL 494 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + ++ G R + D L C + C+ CP G++ Sbjct: 495 LQEMVRGGTVQDGWRSTEVRDA--LDLCLSCKACSSDCPVGVD 535 >gi|254302139|ref|ZP_04969497.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322331|gb|EDK87581.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 435 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H V ++ + + + K LL + + C+ C Sbjct: 308 YILDHCGVNREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKACISC 367 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D R E + L C +C Sbjct: 368 SKCVSACPMGLAP---------------LMFD-RLAAAKEYEEMAV--HNLMDCIECGSC 409 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A+AI K L +K Sbjct: 410 AYICPANRPLAEAIKTGKAKLRAKK 434 >gi|332534028|ref|ZP_08409877.1| electron transport complex protein RnfC [Pseudoalteromonas haloplanktis ANT/505] gi|332036465|gb|EGI72933.1| electron transport complex protein RnfC [Pseudoalteromonas haloplanktis ANT/505] Length = 606 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 22/111 (19%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L H++ + C+ C+ C+ +CP+ ++L Q +W S++ Sbjct: 358 NCILAPDHKELAEPGPEKACIRCSACADACPA-----------SLLPQQLQWFAKSKE-- 404 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IA--KIKMMLLDR 257 D L+ L+ C C CP + + IA +IK D+ Sbjct: 405 ----YDKLQ-EHNLFDCIECGACAYVCPSEIPLVQYYRIAKVEIKEQQADK 450 >gi|313648085|gb|EFS12531.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri 2a str. 2457T] gi|332752640|gb|EGJ83025.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri K-671] gi|332753029|gb|EGJ83413.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri 4343-70] gi|332754522|gb|EGJ84888.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri 2747-71] gi|332765449|gb|EGJ95667.1| glycolate oxidase, iron-sulfur subunit glycolate oxidase, predicted iron-sulfur subunit [Shigella flexneri 2930-71] gi|333000400|gb|EGK19983.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri K-218] gi|333014844|gb|EGK34189.1| glycolate oxidase iron-sulfur subunit [Shigella flexneri K-304] Length = 350 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L+ L RC T NC +CP G+ + I ++++K+ Sbjct: 9 LKTQEHLDRCLTCRNCETTCPSGVRYHNLL-DIGRDIVEQKV 49 >gi|227831455|ref|YP_002833235.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus L.S.2.15] gi|227457903|gb|ACP36590.1| formate dehydrogenase, alpha subunit [Sulfolobus islandicus L.S.2.15] Length = 979 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMK------------DIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC +K A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVKDGMNISVNSKRSMEARKTAISRILRYHKLYCSMCENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H S+ K + +C++C C +C + N Sbjct: 107 NGDCVLHESVIKLNINSQKYIEKPYQVDDSGPFYVYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|45357702|ref|NP_987259.1| formate dehydrogenase subunit beta [Methanococcus maripaludis S2] gi|29650171|gb|AAO85931.1| formate dehydrogenase beta subunit [Methanococcus maripaludis] gi|45047262|emb|CAF29695.1| formate dehydrogenase beta subunit [Methanococcus maripaludis S2] Length = 375 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 72/243 (29%), Gaps = 39/243 (16%) Query: 21 PTGEKNLKEYRIYRWNPDNKGNPCMDT--YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR 78 P K + E Y +P++ +D + ++L + + + Sbjct: 128 PQTAKKMIEL-FYDVDPEDVIKEEIDKGKFIIELKDGSEKSVKIDELEEEGY-------- 178 Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDM 129 R C C + + + LAC + + V ++K+ + Sbjct: 179 -GRRTNCQRCELKVPRNSDLACGNWGTEKGWTFVEVGSEKGEELLKNAQKEGYINVKAPS 237 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQ--SHEDRQKIDGLYECVMCACCSTSCPSY---- 183 IE + + K KE L E + + C+ C C CP Sbjct: 238 EKALEIRGKIEKSMINLGKKFQKEQLDEKYPEPEKWDEYWSRCIKCYGCRDVCPICFCKE 297 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + YL + D FQG RL ++ + C C CP + Sbjct: 298 CALGEDYLDKGTIP------PDP-IMFQGIRLSHMS-----FSCINCGQCEDVCPVEIPL 345 Query: 244 AKA 246 AK Sbjct: 346 AKI 348 >gi|329115075|ref|ZP_08243830.1| Lactate utilization protein B [Acetobacter pomorum DM001] gi|326695518|gb|EGE47204.1| Lactate utilization protein B [Acetobacter pomorum DM001] Length = 467 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 13/153 (8%) Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + + + L ++ + +HF + E + V + L Q Sbjct: 245 PRMADMGVFIRLLSRSALGSPITQYTTHFRGPQKGSEMHVVLVDNGRSHRL-----GMQD 299 Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C +CP Y + G + + +E + L Sbjct: 300 FWTSLKCIRCGACMNTCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFASTMNG 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +CT CP +N + + K + +L + Sbjct: 360 --------SCTNVCPVKINIHEQLYKWRRVLAE 384 >gi|238895009|ref|YP_002919743.1| electron transport complex protein RnfC [Klebsiella pneumoniae NTUH-K2044] gi|238547325|dbj|BAH63676.1| electron transport complex protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 753 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + IA I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|226229184|ref|YP_002763290.1| iron-sulfur binding protein [Gemmatimonas aurantiaca T-27] gi|226092375|dbj|BAH40820.1| iron-sulfur binding protein [Gemmatimonas aurantiaca T-27] Length = 469 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 32/113 (28%), Gaps = 8/113 (7%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F+ + W+ + + C CP Y + Sbjct: 166 FFVGTDQLYRWMLHSPADHPTAFAFVVVFTGIVWFNFTYFREQTCLIVCP-YGRWQAALI 224 Query: 192 GPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + AY ++ + R+ R N D C C Q+CP G++ Sbjct: 225 DRQSTIVAYDYVRGEPREHATKTRDPNAGD------CIDCNACVQTCPTGIDI 271 >gi|225075504|ref|ZP_03718703.1| hypothetical protein NEIFLAOT_00517 [Neisseria flavescens NRL30031/H210] gi|224953139|gb|EEG34348.1| hypothetical protein NEIFLAOT_00517 [Neisseria flavescens NRL30031/H210] Length = 494 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 5/89 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R Sbjct: 220 FMTFFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE---RGEPRGARKKTANKE 275 Query: 222 F-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 276 DSGLGDCINCTMCVQVCPVGIDIRDGLQY 304 >gi|255019719|ref|ZP_05291796.1| CoB--CoM heterodisulfide reductase subunit C [Acidithiobacillus caldus ATCC 51756] gi|254970787|gb|EET28272.1| CoB--CoM heterodisulfide reductase subunit C [Acidithiobacillus caldus ATCC 51756] Length = 226 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 15/113 (13%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + D + L C+ C C+ +CPS + P ++Q Sbjct: 6 EMKEMFDEIRADFRYDHELNGCLNCGICTATCPSAQFYD---YSPREIVQLL-------- 54 Query: 209 EFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E ++ + D +++ C M C CP +P + ++ + + + Sbjct: 55 --WTENVEQIYDAMQEKIWACAQCMTCAARCPFKNSPGGLVMIMREVSIRHGM 105 >gi|149376353|ref|ZP_01894116.1| Polyferredoxin [Marinobacter algicola DG893] gi|149359367|gb|EDM47828.1| Polyferredoxin [Marinobacter algicola DG893] Length = 477 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 9/123 (7%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + +FY I + A + ++ + C CP Y Sbjct: 183 VGYFYPIRELITDLFTLQANGWAYFWVAFFTAATYLN--AGWLREQVCLYMCP-YARFQS 239 Query: 189 RYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 P + +Y D R E +G R +E L C C Q CP G++ Sbjct: 240 VMFDPDTRVVSY----DPNRGEPRGGRKKGIEPSELGLGDCIDCGQCVQVCPTGIDIRDG 295 Query: 247 IAK 249 + Sbjct: 296 LQY 298 >gi|126733616|ref|ZP_01749363.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. CCS2] gi|126716482|gb|EBA13346.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. CCS2] Length = 438 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 11/78 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLY 225 + C+ CP + + P L AYR W + R + + E Sbjct: 172 FGGFMREQVCNYMCP-WPRIQAAMMDPETLTVAYREWRGEPRGKQRVE---------GAG 221 Query: 226 RCHTIMNCTQSCPKGLNP 243 C M C CP G++ Sbjct: 222 DCIDCMACVNVCPAGIDI 239 >gi|146303510|ref|YP_001190826.1| FAD linked oxidase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701760|gb|ABP94902.1| FAD linked oxidase domain protein [Metallosphaera sedula DSM 5348] Length = 989 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 13/130 (10%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDR--QKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 ++R + K +SP + + + D +C+ CA C T CP Y Sbjct: 479 RYRFGIGFAKRISPGGEIQGYKVTKKYLDVFTDYAIKCIDCAMCVTVCPQYRLIPQWPYA 538 Query: 193 PAILL-----QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 P + + + R + + + CH C CP + + + Sbjct: 539 PKGMFDFTKGLISMFELYGRIDVPDSAIAEIS------GCHKCGLCDGVCPARIPISSML 592 Query: 248 AKIKMMLLDR 257 K+ M+ + Sbjct: 593 IKLSSMVARK 602 >gi|288803571|ref|ZP_06409002.1| iron-sulfur cluster binding protein [Prevotella melaninogenica D18] gi|288333994|gb|EFC72438.1| iron-sulfur cluster binding protein [Prevotella melaninogenica D18] Length = 460 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 18/127 (14%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---R 189 + + R + +++ + E +C+ C C +CP Y + Sbjct: 271 FRKARPGGEMHVILVDNGRSDMIANKE----HWMTLKCIRCGACMNTCPVYRRSGGYSYS 326 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y P + L + + + + C ++C CP + P I + Sbjct: 327 YFIPGPIGVDLGMLKNPK-----------QHSGNVSACSLCLSCDCVCPAKVTPGSQIYR 375 Query: 250 IKMMLLD 256 + L Sbjct: 376 WRQSLEK 382 >gi|83816522|ref|YP_446052.1| FAD linked oxidase [Salinibacter ruber DSM 13855] gi|83757916|gb|ABC46029.1| FAD linked oxidases, C-terminal domain protein [Salinibacter ruber DSM 13855] Length = 894 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 34/114 (29%), Gaps = 13/114 (11%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 T P + L ED + +C C T CPS+ + Sbjct: 441 RMGPTYETAPFRTELDFSEDGGFTGAIEKCNGNGACRKLRAGTMCPSFMATREEPDSTRG 500 Query: 196 LLQAYRWLID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + S D G+ + + D C C CP ++ AK Sbjct: 501 RANALRSALAGDLSEDAMTGDDMHEVMD-----LCVQCKACKTECPSNVDMAKI 549 >gi|220910933|ref|YP_002486242.1| D-lactate dehydrogenase (cytochrome) [Arthrobacter chlorophenolicus A6] gi|219857811|gb|ACL38153.1| D-lactate dehydrogenase (cytochrome) [Arthrobacter chlorophenolicus A6] Length = 977 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 10/101 (9%) Query: 162 QKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + C+ C + CPSY D + + L ++ G Sbjct: 570 PFVGNTHACIGVGRCRATTGGFMCPSYRATKDEKDSTRGRSRVLQELTRTKGTSHGG-WS 628 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E L C + C+ CP G++ IA+ K L+D+ Sbjct: 629 SPEVREALDLCLSCKACSADCPTGVD----IAEAKSELVDQ 665 >gi|254374548|ref|ZP_04990029.1| 4Fe-4S ferredoxin [Francisella novicida GA99-3548] gi|151572267|gb|EDN37921.1| 4Fe-4S ferredoxin [Francisella novicida GA99-3548] Length = 906 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 5/111 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++I ++ + E D + +C+ C C CPS + L P Sbjct: 506 QNILNPDVKLTKDTSLHTKNLKELNSVDDQIDKCMECGYCEPVCPSRNLS----LTPRQR 561 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R + E + + L + D + + C T C CP ++ I Sbjct: 562 NTVARKIETLEGEQKQKWLKDY-DYYGIQTCATTSLCKTRCPVDIDTGAFI 611 >gi|195953456|ref|YP_002121746.1| hypothetical protein HY04AAS1_1082 [Hydrogenobaculum sp. Y04AAS1] gi|195933068|gb|ACG57768.1| conserved hypothetical protein [Hydrogenobaculum sp. Y04AAS1] Length = 240 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + ++ C+ C C+ SCPS + P ++Q R+L D E L ++ Sbjct: 34 DFRYHEYIFGCLNCGVCTASCPSNRFFD---YSPREIVQ--RFLED-----DVEVLYDMM 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C C CP NP +A ++ + + Sbjct: 84 HEY-IWACSQCFTCWIRCPFVNNPGGLVAIMREVAVR 119 >gi|152970518|ref|YP_001335627.1| electron transport complex protein RnfC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955367|gb|ABR77397.1| electron transport complex protein RnfC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 715 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + IA I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|89894838|ref|YP_518325.1| hypothetical protein DSY2092 [Desulfitobacterium hafniense Y51] gi|219669280|ref|YP_002459715.1| iron-sulfur cluster binding protein [Desulfitobacterium hafniense DCB-2] gi|89334286|dbj|BAE83881.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539540|gb|ACL21279.1| iron-sulfur cluster binding protein [Desulfitobacterium hafniense DCB-2] Length = 480 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 20/96 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y Y GP ++ E E+ +L Sbjct: 311 RCIRCGACFNVCPVYRQVGGHAYGSVYSGPIGVVIT------PLLEQNYEKWGHLPYYSS 364 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C+++CP + I K + DRK+ Sbjct: 365 L-----CAACSEACPVRIPLQDLIVKHR----DRKV 391 >gi|325204076|gb|ADY99529.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria meningitidis M01-240355] Length = 1277 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 9/94 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 812 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDI 871 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C + CP ++ ++ L Sbjct: 872 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLA 903 >gi|188587261|ref|YP_001918806.1| Heterodisulfide reductase subunit C-like protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351948|gb|ACB86218.1| Heterodisulfide reductase subunit C-like protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 129 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C CS CP + Y I+L+A L D + + L+ C Sbjct: 26 DCYQCMKCSAGCPLTEYMD--YYPHQIMLRAKMGLYD-----------QVFNSKTLWVCA 72 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + M C+ CP+ L PAK + + MLL + Sbjct: 73 SCMACSSRCPRDLEPAKIMEGFRAMLLRER 102 >gi|48477219|ref|YP_022925.1| (S)-2-hydroxy-acid oxidase, iron-sulfur chain [Picrophilus torridus DSM 9790] gi|48429867|gb|AAT42732.1| (S)-2-hydroxy-acid oxidase, iron-sulfur chain [Picrophilus torridus DSM 9790] Length = 399 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C + CP+Y + A ++ + NL Y Sbjct: 14 ESSKCISCGFCDSVCPTYKNSGYDMARTARGRAQSGLVMFNGIISND---FNLNFSDTFY 70 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C Q CP G++ + I+ I M+L++ Sbjct: 71 SCLDCHVCLQVCPTGVDAGR-ISDISRMILNK 101 >gi|222824131|ref|YP_002575705.1| iron-sulfur-cluster binding protein [Campylobacter lari RM2100] gi|222539353|gb|ACM64454.1| conserved hypothetical protein, putative iron-sulfur-cluster binding protein [Campylobacter lari RM2100] Length = 422 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 8/89 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCH 228 CV C C C + N D P +D ++ + L+ E+ C Sbjct: 11 CVKCGKCIPVCTIHEINRDESTSPRGF-------LDLISAYKNQELELDENLKKTFESCF 63 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 NC + CP L AI K++ + + Sbjct: 64 LCTNCVEVCPSHLRVDSAIEKVRFDIAQK 92 >gi|322378526|ref|ZP_08052974.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter suis HS1] gi|321149040|gb|EFX43492.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter suis HS1] Length = 460 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-RCH 228 CV CA C SC Y + D P +D + + E L+ +++ C Sbjct: 35 CVKCAKCIPSCTIYRIHKDEITSPRGF-------LDLIAQVKQESLELDNSLKKIFETCF 87 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 C Q CP L I +I+ M Sbjct: 88 LCTTCVQVCPLHLPIDAMIERIRHM 112 >gi|218778092|ref|YP_002429410.1| hypothetical protein Dalk_0233 [Desulfatibacillum alkenivorans AK-01] gi|218759476|gb|ACL01942.1| Putative uncharacterized Fe-S oxidoreductase (contains cysteine-rich region domain) [Desulfatibacillum alkenivorans AK-01] Length = 424 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 8/91 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 EC+ C C T CP + L + + +DE R + D L RC Sbjct: 11 ECIKCGSCMTVCPVFQNTHMEADVARGRLAVLKQV--EKDEKLA-RSAIMRDV--LTRCL 65 Query: 229 TIMNCTQSCPKGLN-PAKAIAKIKMMLLDRK 258 C C + P++ I + ++ Sbjct: 66 LCGACENVCANKVPAPSRVIQG--REIARKR 94 >gi|20090905|ref|NP_616980.1| hypothetical protein MA2058 [Methanosarcina acetivorans C2A] gi|19915983|gb|AAM05460.1| hypothetical protein MA_2058 [Methanosarcina acetivorans C2A] Length = 378 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 18/161 (11%) Query: 101 VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 + + YP +SV+ + H R E K L++ ++ Sbjct: 231 RTPAEWAFRYLWNYPE--ISVVLSGMSGSEHLIENLRIAEEGQSNSLSAEEKNLIKEVKE 288 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--SRDEFQGERLD-- 216 K C C C CPS + + +L D D+ R Sbjct: 289 IYKSRIKVNCTGCKYCIP-CPS----------GVNIPRNLSYLNDVFMLDDVANARFQYG 337 Query: 217 -NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L + C C + CP+G++ + + ++++ + + Sbjct: 338 VLLSPEEKAGNCAECGECEEVCPQGISIRELLKEVRVYMEE 378 >gi|260590779|ref|ZP_05856237.1| iron-sulfur cluster binding protein [Prevotella veroralis F0319] gi|260537265|gb|EEX19882.1| iron-sulfur cluster binding protein [Prevotella veroralis F0319] Length = 460 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 8/93 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C +CP Y + ++ G Sbjct: 298 HWETLKCIRCGACMNTCPVYR--------RSGGYSYSYFIPGPIGVNLGMLKSPKRHSGN 349 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C ++C CP ++P I + + L Sbjct: 350 VSACSLCLSCDCVCPAKVSPGSQIYRWRQSLEK 382 >gi|254491922|ref|ZP_05105101.1| formate dehydrogenase, alpha subunit [Methylophaga thiooxidans DMS010] gi|224463400|gb|EEF79670.1| formate dehydrogenase, alpha subunit [Methylophaga thiooxydans DMS010] Length = 932 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 29/191 (15%) Query: 72 PTLTL-RRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 P L R ++G C +C + IDG LA + + K LV++M Sbjct: 41 PHLCYSERQGQDGNCRACMVEIDGERVLAPSCCRYPSEGMKVDSQSQRALHSQK-LVLEM 99 Query: 130 ------SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG-----LYECVMCACCST 178 ++ + ++ W + + + + C+ C C Sbjct: 100 LKSDVSEQPHTLNSELDYWAGKLEISTPRFKPRKQAPADLSHPGIAVNMDACIQCTRCVR 159 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +C N L E + +L+DP C C ++CP Sbjct: 160 ACRDEQNNDVIGLAMRGNH--------------TEIVFDLDDPMGESSCVACGECVEACP 205 Query: 239 KG-LNPAKAIA 248 G L PA +A Sbjct: 206 TGALMPANDVA 216 >gi|254468552|ref|ZP_05081958.1| oxidoreductase, FAD-binding [beta proteobacterium KB13] gi|207087362|gb|EDZ64645.1| oxidoreductase, FAD-binding [beta proteobacterium KB13] Length = 1295 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 9/110 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSR 207 ++ E + D + C+ C C C ++ + ++ LG ++L++A+ + +R Sbjct: 813 MEQSEMGEIADSISSCLRCGKCKPVCTTHVPRANLMYSPRNKILGTSLLIEAFLYEEQTR 872 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + D D C C CP ++ + +++ L + Sbjct: 873 RGISLKHFDEFNDI--ADHCTVCHKCLNPCPVNIDYGEVSIQMRNFLRKQ 920 >gi|21229258|ref|NP_635180.1| oxidoreductase [Methanosarcina mazei Go1] gi|20907833|gb|AAM32852.1| oxidoreductase [Methanosarcina mazei Go1] Length = 377 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 8/153 (5%) Query: 101 VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 + + YP +SV+ + +M H R E K L+ + Sbjct: 231 RTPAEWAFRYLWDYPE--ISVVLSGMSEMEHLKENLRIAEQGQPNSLSAEEKSLISEVSE 288 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C C C CPS + + +++D + + + L Sbjct: 289 IYRSRIKVNCTNCKYCMP-CPS-----GVNIPRNLSYLNDVFMLDDMENAKFQYGVLLLP 342 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C + CP+ + K + +++ Sbjct: 343 EEKAGNCIECGECEEVCPQNIKIRKMLKEVREK 375 >gi|289426215|ref|ZP_06427961.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes SK187] gi|289153380|gb|EFD02095.1| FAD linked oxidase, C-terminal domain protein [Propionibacterium acnes SK187] Length = 734 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 7/91 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 D + CV C C CPS D L P + R + +R DE L+ Sbjct: 539 QDEVDRCVECGYCEPVCPSR----DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C +CP +N + +++ Sbjct: 595 YPVVQTCAVDGMCQTNCPVHINTGDLVRRLR 625 >gi|225374889|ref|ZP_03752110.1| hypothetical protein ROSEINA2194_00512 [Roseburia inulinivorans DSM 16841] gi|225213272|gb|EEG95626.1| hypothetical protein ROSEINA2194_00512 [Roseburia inulinivorans DSM 16841] Length = 464 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ED C+ C C +CP L P+ L + D + + Sbjct: 372 EDEVAKAEPSPCINCGRCVEACP-------EQLIPSRLAKMA-------DHGVADEFEKW 417 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C+ +CP A++I +K +L K Sbjct: 418 HGLE----CIECGSCSFACPAKRQLAQSIKTMKKQVLAAK 453 >gi|254512090|ref|ZP_05124157.1| cytochrome c oxidase accessory protein CcoG [Rhodobacteraceae bacterium KLH11] gi|221535801|gb|EEE38789.1| cytochrome c oxidase accessory protein CcoG [Rhodobacteraceae bacterium KLH11] Length = 454 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 6/81 (7%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + +++ W + R + + L Sbjct: 183 FFFGGFAREQICIYACPWPRIQAAMMDEDTLVVGYREWRGEPRGKGKRT------SESEL 236 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 237 GDCIDCMACVNVCPVGIDIRD 257 >gi|163783949|ref|ZP_02178918.1| oxido/reductase iron sulfur protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880784|gb|EDP74319.1| oxido/reductase iron sulfur protein [Hydrogenivirga sp. 128-5-R1-1] Length = 438 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 ++CV C+ C + CP+Y + P L ++D + + Sbjct: 13 AHQCVKCSACRSVCPTYSVVKEERSSPRGRLSLAEAVVDGIMPLTEDIVAQWNQ------ 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C CP + + + + + M Sbjct: 67 CAMCRRCEWICPNEVEYKEIMFRARHM 93 >gi|317485220|ref|ZP_07944101.1| FAD binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923511|gb|EFV44716.1| FAD binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1199 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 17/101 (16%) Query: 169 ECVMCACCSTSCPS---------YWWNSDRYLGPAILLQAYRWLIDSRDEFQ--GERLDN 217 C C C CP + N + LG I Y + R + E Sbjct: 727 MCTRCGKCKQVCPMMYPECSYHFHPRNKNMVLGAIIEAIYYSQINKGRPDPSILAELRAM 786 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +E C CT CP + A +++ L + Sbjct: 787 ME------HCTGCGRCTSVCPVKIPSADVALQLRAFLDEEG 821 >gi|260577340|ref|ZP_05845312.1| heterodisulfide reductase subunit C [Rhodobacter sp. SW2] gi|259020460|gb|EEW23784.1| heterodisulfide reductase subunit C [Rhodobacter sp. SW2] Length = 248 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 11/94 (11%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + + + ++ C C C+ +C N + P + R ++ Sbjct: 41 TDYNEAMQEEIAAMPGGENIHRCWQCGSCTNACTVNAVNPE--FNPRYWIYLIRTGMEE- 97 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + L D +++C + CT +CP+ + Sbjct: 98 --------ELLRDKDIIWQCVSCNKCTYACPRDV 123 >gi|83409919|emb|CAI64340.1| formate dehydrogenase like protein, beta chain [uncultured archaeon] Length = 384 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 11/99 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP-AILLQAYRWLID 205 + E+ + ++ + +C+ C C CP D L+ Y+ + Sbjct: 262 EKEIFPEIPDEERMQYYMEPMADCIDCGACKEVCPVCACGEDSKCTMFHSLVDNYKMSM- 320 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + RL +L D C C+ CP + Sbjct: 321 ----YHMVRLLHLSD-----SCIACGQCSDVCPSDIPIT 350 >gi|302343564|ref|YP_003808093.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301640177|gb|ADK85499.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 316 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 11/114 (9%) Query: 147 SPKPAKELLQSHEDR--QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 A + E+R + +C+ C C +CP + + +W Sbjct: 181 DKMAAPWEALAPEERWSTFKEAFADCIRCYACRDACPLCYCHVCFVDESKP-----QWCG 235 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAK-IKMML 254 ++DE + L RC C +CP G+ I K ++ M Sbjct: 236 KTQDEADVQTFHILRAFHCAGRCTDCGACESACPMGIKMRVLTSKIEKDVRQMY 289 >gi|331698707|ref|YP_004334946.1| D-lactate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326953396|gb|AEA27093.1| D-lactate dehydrogenase (cytochrome) [Pseudonocardia dioxanivorans CB1190] Length = 929 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED---PFRL 224 CV C C CPS D P + R +R + + LE + Sbjct: 534 ERCVECGFCEPVCPSR----DVTTTPRQRIVLRRETERARLAGDTDLVAELESGYVHDGV 589 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP +N + +++ R + Sbjct: 590 DTCAVDGMCQTACPVLINTGDLVRRLRAERPQRAV 624 >gi|319637938|ref|ZP_07992704.1| ferredoxin [Neisseria mucosa C102] gi|317401093|gb|EFV81748.1| ferredoxin [Neisseria mucosa C102] Length = 494 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 23/83 (27%), Gaps = 5/83 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R Sbjct: 220 FMTFFFAHIMREKVCLHMCP-YARFQSAMFDKDTLIISYDAE---RGEPRGARKKTANKE 275 Query: 222 F-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 276 DSGLGDCINCTMCVQVCPVGIDI 298 >gi|149917174|ref|ZP_01905674.1| hypothetical protein PPSIR1_39870 [Plesiocystis pacifica SIR-1] gi|149822090|gb|EDM81483.1| hypothetical protein PPSIR1_39870 [Plesiocystis pacifica SIR-1] Length = 680 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 22/115 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWL------------ 203 + + + C+ C C+ CP+ + L + W Sbjct: 260 DHPRWDELAARCLSCGSCTLVCPTCFCHRVEERAPLDAPTSERVRHWDSCFTDEHSRIHG 319 Query: 204 IDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + + + + C C CP G++ + +A I+ Sbjct: 320 AQFRPQIRERYRQWMTHKLGAWVSQFGTSGCVGCGRCIAWCPVGIDITEEVAAIR 374 >gi|77360046|ref|YP_339621.1| electron transport complex protein RnfC [Pseudoalteromonas haloplanktis TAC125] gi|76874957|emb|CAI86178.1| Electron transport complex protein rnfC [Pseudoalteromonas haloplanktis TAC125] Length = 846 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 22/111 (19%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L H++ + C+ C+ C+ +CP+ ++L Q +W S++ Sbjct: 358 NCILAPDHKELAEPGPEKACIRCSACADACPA-----------SLLPQQLQWFAKSKE-- 404 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 D L+ L+ C C CP + + A +IK ++ Sbjct: 405 ----YDKLQ-EHNLFDCIECGACAYVCPSEIPLVQYYRVAKVEIKEQQAEK 450 >gi|294495099|ref|YP_003541592.1| Heterodisulfide reductase subunit C [Methanohalophilus mahii DSM 5219] gi|292666098|gb|ADE35947.1| Heterodisulfide reductase subunit C [Methanohalophilus mahii DSM 5219] Length = 201 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 38/93 (40%), Gaps = 14/93 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C+ C C++SCP+ ++ ++ W ++ + ++ Sbjct: 29 IERCMQCGACTSSCPAARYSDYNPRNVMKRVKENDW--------------SVIEDKTIWN 74 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP+ +P++ + ++ M +++ I Sbjct: 75 CFYCYTCNLRCPRNNSPSQIVQVLRQMAINKGI 107 >gi|238919984|ref|YP_002933499.1| electron transport complex protein RnfC [Edwardsiella ictaluri 93-146] gi|259494050|sp|C5BDE7|RNFC_EDWI9 RecName: Full=Electron transport complex protein rnfC gi|238869553|gb|ACR69264.1| electron transport complex protein RnfC [Edwardsiella ictaluri 93-146] Length = 800 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ C+ C C+ CP+ +L Q W ++ Sbjct: 359 NCILTPSRDEFSVPQAEQPCIRCGACADVCPA-----------RLLPQQLYWFSQGKEHD 407 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L C C CP + + Sbjct: 408 KAR-------GYHLQECIECGACAYVCPSNIPLVQ 435 >gi|209543438|ref|YP_002275667.1| hypothetical protein Gdia_1270 [Gluconacetobacter diazotrophicus PAl 5] gi|209531115|gb|ACI51052.1| protein of unknown function DUF162 [Gluconacetobacter diazotrophicus PAl 5] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 21/182 (11%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS--------QHR 137 GS + + N C I + L + + DL V + Q+ Sbjct: 219 GSFVVCTNEGNADLCATVPGVHIATIGIERL--VPRMADLGVFVRLLSRSALGSPITQYT 276 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + R + + +C+ C C +CP Y + G Sbjct: 277 THFRGPQDGGEMHVILVDNGRSARLGMADFWTSLKCIRCGACMNTCPVYRRSGGLSYGAV 336 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +E + L +CT CP ++ + K + +L Sbjct: 337 YSGPIGAIIDPTFNERKYSTLPFASTMNG--------SCTNVCPVRIDIHDQLYKWRQVL 388 Query: 255 LD 256 ++ Sbjct: 389 VE 390 >gi|302556699|ref|ZP_07309041.1| oxidoreductase, FAD-binding [Streptomyces griseoflavus Tu4000] gi|302474317|gb|EFL37410.1| oxidoreductase, FAD-binding [Streptomyces griseoflavus Tu4000] Length = 961 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 9/114 (7%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRY 190 ++ A L +D CV C T+ CPSY D Sbjct: 522 NLRVSPHRTPLPLATVLPFHADDGDFAKATRRCVGVGKCRTAAHRGDVMCPSYRVTLDEK 581 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + G R + D L C + C+ CP G++ A Sbjct: 582 DSTRGRARLLYEMTQGEVITDGWRSTEVRDA--LDLCLSCKGCSVDCPVGVDVA 633 >gi|268318128|ref|YP_003291847.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rhodothermus marinus DSM 4252] gi|262335662|gb|ACY49459.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rhodothermus marinus DSM 4252] Length = 379 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 23/157 (14%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 PH D V + Q + + + L +E + C+ CA C Sbjct: 215 PHREAQPD-EVAAADTRLQEAATRMGRHLDTEGLKELLQACYEHPCWDEVARRCLSCANC 273 Query: 177 STSCPS---YWWNSDRYLGPAILLQAYRW---------LIDSRDEFQGER---------- 214 + CP+ + L + RW I Q R Sbjct: 274 TMVCPTCFCHTVEDVTDLTGQTTERVRRWDSCFSVEFSYIHGGSVRQSTRSRYRQWLMHK 333 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L D F + C C CP G++ + +A I+ Sbjct: 334 LSTWVDQFGVMGCVGCGRCITWCPVGIDLTEEVAAIR 370 >gi|289577375|ref|YP_003476002.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter italicus Ab9] gi|297543662|ref|YP_003675964.1| RnfABCDGE type electron transport complex subunit C [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527088|gb|ADD01440.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter italicus Ab9] gi|296841437|gb|ADH59953.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 444 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ + + C+ C C CP L + + + E Sbjct: 355 LILTKEEARPQQVLPCIKCGKCVEVCPVNLLP----LYISSYSLKKNF-------EKAEE 403 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L+ C +C+ CP A++I K ++ RK Sbjct: 404 YNALD-------CVECGSCSYICPAKRPLAESIRLAKREIIARK 440 >gi|268594712|ref|ZP_06128879.1| oxidoreductase [Neisseria gonorrhoeae 35/02] gi|268548101|gb|EEZ43519.1| oxidoreductase [Neisseria gonorrhoeae 35/02] Length = 525 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 60 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSVKHFEELMDI 119 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ ++ L D Sbjct: 120 G--DHCTVCHRCVKPCPVNIDFGDVTVAVRNYLAD 152 >gi|256544870|ref|ZP_05472241.1| Na(+)-translocating NADH-quinone reductase, A subunit [Anaerococcus vaginalis ATCC 51170] gi|256399369|gb|EEU12975.1| Na(+)-translocating NADH-quinone reductase, A subunit [Anaerococcus vaginalis ATCC 51170] Length = 443 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +P + K + +L +++ K C+ CA C CP Sbjct: 337 MMGIAQPNINQPVEKASNCILVLNKEESKAPITNPCIRCAKCVNVCPVGLM--------- 387 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +++ + E+ D +D L C +C+ CP +AI K + Sbjct: 388 -PLLIHKFSL-------KEKFDKAQDLHIL-DCIECGSCSYICPSKRPLVEAIRFGKRQI 438 Query: 255 LDRK 258 Sbjct: 439 RQAG 442 >gi|224370158|ref|YP_002604322.1| putative fusion protein GlcF/heterodisulfide reductase HdrA [Desulfobacterium autotrophicum HRM2] gi|223692875|gb|ACN16158.1| putative fusion protein GlcF/heterodisulfide reductase HdrA [Desulfobacterium autotrophicum HRM2] Length = 314 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 24/91 (26%), Gaps = 6/91 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C CP + P L L+ + E Sbjct: 14 WKSNLDSCIRCGYCYEHCPIFKHTRWESDAPRAKLIMLYGLLAGKLEPSA------YIAD 67 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ C C +C G+ + K Sbjct: 68 KIASCFYCGRCVAACSSGVPLTEIFTDAKRD 98 >gi|330816892|ref|YP_004360597.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] gi|327369285|gb|AEA60641.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 31/189 (16%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS--------QHR 137 G+ + + N A + +++ + + DL V + Q+ Sbjct: 214 GTVVVCTNEGN--ADLSANVPPVHIVSIGIEKLIPRVADLGVFVRLLSRSALGSPITQYT 271 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYW-----WNSDR 189 S + + + R +D + C+ C C +CP Y Sbjct: 272 SHFRKPRPGTEMHFVIVDNGRSARLAMDDFWYSLKCIRCGACMNTCPVYRRSSGLSYGST 331 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y GP + + + +R L + +C+ CP +N + + + Sbjct: 332 YAGPIGAILNPAYDL--------KRFSTLP-----FASTMNGSCSNVCPVKINIHEQLYR 378 Query: 250 IKMMLLDRK 258 + ++ + Sbjct: 379 WRQIVAEEG 387 >gi|327400334|ref|YP_004341173.1| heterodisulfide reductase subunit E [Archaeoglobus veneficus SNP6] gi|327315842|gb|AEA46458.1| heterodisulfide reductase, subunit E, putative [Archaeoglobus veneficus SNP6] Length = 373 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C+ CA CS C + D P + +W + + L ++ Sbjct: 19 LKKCMQCATCSVVC---KLSPDENPFPRKEMIWAQWGL----------KEKLLRDPNIWL 65 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 CH +C+ CP+G P + ++ I+ ++ Sbjct: 66 CHQCNDCSAYCPRGARPGEVLSAIRAAVI 94 >gi|218548775|ref|YP_002382566.1| electron transport complex protein RnfC [Escherichia fergusonii ATCC 35469] gi|226735446|sp|B7LQP1|RNFC_ESCF3 RecName: Full=Electron transport complex protein rnfC gi|218356316|emb|CAQ88934.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia fergusonii ATCC 35469] Length = 726 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 26/99 (26%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSSCADACPADLLPQQLYWFSKG---------QQHDKATA---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C CP + + IA I+ + K Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQEERRAAEAK 457 >gi|118594443|ref|ZP_01551790.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Methylophilales bacterium HTCC2181] gi|118440221|gb|EAV46848.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Methylophilales bacterium HTCC2181] Length = 510 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 18/121 (14%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + V+ + E + + + C+ CA C+ +CP + + Sbjct: 337 KLPSVNVPVTKAMNCVIDAEPEMIENNNPVLPCIRCAKCAEACPVNLQPQELF------- 389 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 W S + E + L+ C C+ CP + + K ++ Sbjct: 390 ----WFSQSNQFEKAENYN-------LFDCIECGCCSYVCPSNIPLVQYYRYAKSEIISD 438 Query: 258 K 258 + Sbjct: 439 R 439 >gi|120554706|ref|YP_959057.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinobacter aquaeolei VT8] gi|120324555|gb|ABM18870.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Marinobacter aquaeolei VT8] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 9/123 (7%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + +FY I + A + ++ + C CP Y Sbjct: 182 VGYFYPIRELIVDLFTLQANGWAYFWVAFFTVATYLN--AGWMREQVCLYMCP-YARFQS 238 Query: 189 RYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKA 246 P + +Y D R E +G R +E L C C Q CP G++ Sbjct: 239 VMFDPNTRVVSY----DPNRGEPRGSRKKGVEPAEVGLGDCIDCGQCVQVCPTGIDIRDG 294 Query: 247 IAK 249 + Sbjct: 295 LQY 297 >gi|110834208|ref|YP_693067.1| iron-sulfur cluster-binding protein [Alcanivorax borkumensis SK2] gi|110647319|emb|CAL16795.1| iron-sulfur cluster-binding protein [Alcanivorax borkumensis SK2] Length = 470 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 2/82 (2%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S + +++ + R +R ++ D C Sbjct: 212 AGFMREQVCLYMCPYARFQSVMFDRDTLIVSYDEKRGEPRGRGAKKREQSVVDEKG--DC 269 Query: 228 HTIMNCTQSCPKGLNPAKAIAK 249 C Q CP G++ + Sbjct: 270 IDCGMCVQVCPTGIDIRDGLQY 291 >gi|332797392|ref|YP_004458892.1| formate dehydrogenase subunit alpha [Acidianus hospitalis W1] gi|332695127|gb|AEE94594.1| formate dehydrogenase, alpha subunit [Acidianus hospitalis W1] Length = 977 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 53/204 (25%), Gaps = 28/204 (13%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNTLACVKDMKDIKG 109 + + +L P + C SC + ++G AC + D Sbjct: 11 ETTANEWETILSVLKRNGVYLPHICYNEGLTPIESCDSCLVEVNGRLVRACSTKVSDGMN 70 Query: 110 AIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + P L + + + + + H ++ K Sbjct: 71 VLVNSPRAVNARKTAISRILKYHKLYCSICENNNGDCVLHEAVIKLGINSQKYVEKPYSV 130 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 I +C++C C +C + N ++ + R + D+ Sbjct: 131 DDTGPFYIYDPSQCILCGRCVEACQDFAVNEVIWINWDLNPP--RVIWDN---------- 178 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 +P C C CP Sbjct: 179 --GNPIGNSSCVNCGTCVTVCPVN 200 >gi|325849927|ref|ZP_08170966.1| electron transport complex, RnfABCDGE type, C subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479951|gb|EGC83034.1| electron transport complex, RnfABCDGE type, C subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 438 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +P + K + +L +++ K C+ CA C CP Sbjct: 332 MMGIAQPNINQPVEKASNCILVLNKEESKAPVTNPCIRCAKCVNVCPVGLM--------- 382 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +++ + E+ D +D L C +C+ CP +AI K + Sbjct: 383 -PLLIHKFSL-------KEKFDKAQDLHIL-DCIECGSCSYICPSKRPLVEAIRFGKRQI 433 Query: 255 LDRK 258 Sbjct: 434 RQAG 437 >gi|145296280|ref|YP_001139101.1| hypothetical protein cgR_2197 [Corynebacterium glutamicum R] gi|140846200|dbj|BAF55199.1| hypothetical protein [Corynebacterium glutamicum R] Length = 948 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 163 KIDGLYECVMCACCST----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 I+ + CV + C + CPS+ D + + G R + + Sbjct: 538 MINAVNRCVGVSACRSESDAMCPSFQITGDEVHSTRGRARLLSEMFRGESIADGYRSEEV 597 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLN 242 L C + C CP ++ Sbjct: 598 N--EALDLCLSCKACASECPVNVD 619 >gi|94266256|ref|ZP_01289963.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93453182|gb|EAT03646.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 397 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 13/85 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP + D P + +W + D L + Sbjct: 25 LKKCYQCATCSVVCP---LSGDDKPFPRKEMIWAQWGL----------KDQLVADPDVML 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 CH +CT CP+G P + I+ Sbjct: 72 CHQCGDCTTHCPRGAKPGDVLGAIR 96 >gi|19553512|ref|NP_601514.1| FAD/FMN-containing dehydrogenase [Corynebacterium glutamicum ATCC 13032] gi|62391156|ref|YP_226558.1| glycolate oxidase FAD-linked subunit oxidoreductase [Corynebacterium glutamicum ATCC 13032] gi|21325086|dbj|BAB99708.1| FAD/FMN-containing dehydrogenases [Corynebacterium glutamicum ATCC 13032] gi|41326495|emb|CAF20657.1| PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE [Corynebacterium glutamicum ATCC 13032] Length = 948 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 163 KIDGLYECVMCACCST----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 I+ + CV + C + CPS+ D + + G R + + Sbjct: 538 MINAVNRCVGVSACRSESDAMCPSFQITGDEVHSTRGRARLLSEMFRGESIADGYRSEEV 597 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLN 242 L C + C CP ++ Sbjct: 598 N--EALDLCLSCKACASECPVNVD 619 >gi|196229153|ref|ZP_03128018.1| FAD linked oxidase domain protein [Chthoniobacter flavus Ellin428] gi|196226385|gb|EDY20890.1| FAD linked oxidase domain protein [Chthoniobacter flavus Ellin428] Length = 1040 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 38/132 (28%), Gaps = 8/132 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + V H Y + ++ P+ + L CV C Sbjct: 536 PANQMNPGKVAGPGHIYRRDENLRLGEHYDPPQVKTHFQFPDDKGSFSYALERCVGVGKC 595 Query: 177 S-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLYRCHTI 230 T CPSY D ++ ++ + + R D + L C + Sbjct: 596 RRESAGTMCPSYMVTHDEKHCTRGRARSLFEMLQGKVIGRNGWRDDAVH--EALDLCLSC 653 Query: 231 MNCTQSCPKGLN 242 C CP ++ Sbjct: 654 KGCKSDCPMNVD 665 >gi|332184227|gb|AEE26481.1| Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing [Francisella cf. novicida 3523] Length = 906 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 6/124 (4%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D++ + + + + ++I ++ + + E D + +C+ C C CPS Sbjct: 494 DIMWQIKNLFDK-QNILNPNVKLTKDTSLHIKNLKELNSVDDQIDKCMECGYCEPVCPSR 552 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + L P R + E + + L + + + C T C CP ++ Sbjct: 553 NLS----LTPRQRNTVARKIETLEGEQKQKWLKDYN-YYGIQTCATTSLCKTRCPVDIDT 607 Query: 244 AKAI 247 + I Sbjct: 608 GRFI 611 >gi|322379762|ref|ZP_08054072.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter suis HS5] gi|321147833|gb|EFX42423.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) [Helicobacter suis HS5] Length = 469 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-RCH 228 CV CA C SC Y + D P +D + + E L+ +++ C Sbjct: 40 CVKCAKCIPSCTIYRIHKDEITSPRGF-------LDLIAQVKQEGLELDNSLKKIFETCF 92 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 C Q CP L I +I+ M Sbjct: 93 LCTTCVQVCPLHLPIDAMIERIRHM 117 >gi|226940366|ref|YP_002795440.1| Electron transport complex protein rnfC [Laribacter hongkongensis HLHK9] gi|226715293|gb|ACO74431.1| Electron transport complex protein rnfC [Laribacter hongkongensis HLHK9] Length = 440 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 24/90 (26%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP L P++L R + E L + C Sbjct: 367 PCIRCGQCIDACPM-------GLNPSLL---------GRLAGKQEYY--LTARHGVLDCI 408 Query: 229 TIMNCTQSCPKGLNPA------KAIAKIKM 252 CT SCP G+ K+I + + Sbjct: 409 ECGACTLSCPSGIPLVQYHRMSKSILRQRR 438 >gi|238027397|ref|YP_002911628.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] gi|237876591|gb|ACR28924.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] Length = 493 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 18/104 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +C+ C C +CP Y Y GP + + + +R Sbjct: 297 AMDDFWYSLKCIRCGACMNTCPVYRRSSGLSYGSTYAGPIGAILNPAYDL--------KR 348 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + +C+ CP +N + + K + ++ + Sbjct: 349 FSTLP-----FASTMNGSCSNVCPVKINIHEQLYKWRQVVAEEG 387 >gi|237750765|ref|ZP_04581245.1| ferredoxin-type oxidoreductase [Helicobacter bilis ATCC 43879] gi|229373855|gb|EEO24246.1| ferredoxin-type oxidoreductase [Helicobacter bilis ATCC 43879] Length = 448 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 6/88 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV CA C +C Y N D P L R + D++E C Sbjct: 30 CVKCAKCVPTCTIYGVNRDEITSPRGYLDLANAYAKGRLLLDKQLKDSIE------SCFL 83 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +C + CP L I + ++ + + Sbjct: 84 CTSCVEQCPMHLPVDVVIQRTRVDIAKK 111 >gi|108801828|ref|YP_642025.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Mycobacterium sp. MCS] gi|119870981|ref|YP_940933.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Mycobacterium sp. KMS] gi|108772247|gb|ABG10969.1| Pyruvate:ferredoxin (flavodoxin) oxidoreductase [Mycobacterium sp. MCS] gi|119697070|gb|ABL94143.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Mycobacterium sp. KMS] Length = 1191 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 14/96 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 D + C+ C C+ CP + +++DR G + E + Sbjct: 682 DLAAVWDPDTCIQCGNCAFVCPHSVIRTKLYDADRLDGAPGAFASAPLNAVGLPESRYTL 741 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPK---GLNPAKAI 247 +ED C C ++CP G+ KAI Sbjct: 742 QVYVED------CTGCGLCVEACPAVAPGIPLTKAI 771 >gi|325497183|gb|EGC95042.1| electron transport complex protein RnfC [Escherichia fergusonii ECD227] Length = 726 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 26/99 (26%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSSCADACPADLLPQQLYWFSKG---------QLHDKATA---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C CP + + IA I+ + K Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQEERRAAEAK 457 >gi|324113403|gb|EGC07378.1| electron transporter [Escherichia fergusonii B253] Length = 627 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 26/99 (26%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSSCADACPADLLPQQLYWFSKG---------QLHDKATA---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C CP + + IA I+ + K Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQEERRAAEAK 457 >gi|291279728|ref|YP_003496563.1| glycolate oxidase iron-sulfur subunit GlcF [Deferribacter desulfuricans SSM1] gi|290754430|dbj|BAI80807.1| glycolate oxidase, iron-sulfur subunit GlcF [Deferribacter desulfuricans SSM1] Length = 411 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 8/107 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E +Q D + +C+ C C CP Y + + + + + E Sbjct: 1 MKKIIEELKQIEDLIIKCMKCGTCQAYCPLYQKDFFEGSVARGKITLLESIYEGKIEDVD 60 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L L+ C C +CP G+ + K K L RK+ Sbjct: 61 NILKYLD------YCILCGRCETNCPSGVKTTEIFLKGKSTL--RKV 99 >gi|149912038|ref|ZP_01900631.1| electron transport complex protein RnfC [Moritella sp. PE36] gi|149804899|gb|EDM64934.1| electron transport complex protein RnfC [Moritella sp. PE36] Length = 931 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 20/106 (18%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + L ++ ++ C+ C CS CP Q W + Sbjct: 357 TKTGNCILTPVKDEIPQVREADACIRCGECSEVCPVDLLP-----------QQLHWYSQA 405 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAKI 250 +D + L D + L C C+ CP + IAK+ Sbjct: 406 KD------VKKLND-YNLMDCIECGACSYVCPSQIPLVHQYRIAKV 444 >gi|325290018|ref|YP_004266199.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophobotulus glycolicus DSM 8271] gi|324965419|gb|ADY56198.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophobotulus glycolicus DSM 8271] Length = 189 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R+ +C C C+ CP + P +++ + + E L Sbjct: 21 ARESGVEFNKCYQCGKCTAGCPVAFAMDKT---PREIMRLLQLSM------AEEALK--- 68 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C+ CP+ ++ A + +++M + Sbjct: 69 -SHTIWLCASCQTCSVRCPREVDIAAVMESVRIMAKKKG 106 >gi|256425960|ref|YP_003126613.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] gi|256040868|gb|ACU64412.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] Length = 169 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 13/121 (10%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++IK +++ H + + +++ + + H + +G C C C+ + Sbjct: 26 NIIKGMIITFKHIWKRKETVKY--PEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVA 83 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + A Y R+E R + RC C ++CPK Sbjct: 84 CPAEAITMEAAERKAGEEHLY------REEKYAARYEINML-----RCIFCGFCEEACPK 132 Query: 240 G 240 Sbjct: 133 D 133 >gi|212695714|ref|ZP_03303842.1| hypothetical protein ANHYDRO_00234 [Anaerococcus hydrogenalis DSM 7454] gi|212677387|gb|EEB36994.1| hypothetical protein ANHYDRO_00234 [Anaerococcus hydrogenalis DSM 7454] Length = 443 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +P + K + +L +++ K C+ CA C CP Sbjct: 337 MMGIAQPNINQPVEKASNCILVLNKEESKAPVTNPCIRCAKCVNVCPVGLM--------- 387 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L +++ + E+ D +D L C +C+ CP +AI K + Sbjct: 388 -PLLIHKFSL-------KEKFDKAQDLHIL-DCIECGSCSYICPSKRPLVEAIRFGKRQI 438 Query: 255 LDRK 258 Sbjct: 439 RQAG 442 >gi|162146565|ref|YP_001601024.1| 4Fe-4S ferredoxin, iron-sulfur binding [Gluconacetobacter diazotrophicus PAl 5] gi|161785140|emb|CAP54685.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Gluconacetobacter diazotrophicus PAl 5] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 55/182 (30%), Gaps = 21/182 (11%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVV--------DMSHFYSQHR 137 GS + + N C I + L + + DL V + +Q+ Sbjct: 219 GSFVVCTNEGNADLCATVPGVHIATIGIERL--VPRMADLGVFIRLLSRSALGSPITQYT 276 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + R + + +C+ C C +CP Y + G Sbjct: 277 THFRGPQDGGEMHVILVDNGRSARLGMADFWTSLKCIRCGACMNTCPVYRRSGGLSYGAV 336 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D ER + + +CT CP ++ + K + +L Sbjct: 337 YSGPIGAII----DPTFNERKYSTLP----FASTMNGSCTNVCPVRIDIHDQLYKWRQVL 388 Query: 255 LD 256 ++ Sbjct: 389 VE 390 >gi|329120283|ref|ZP_08248951.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria bacilliformis ATCC BAA-1200] gi|327462624|gb|EGF08947.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Neisseria bacilliformis ATCC BAA-1200] Length = 1280 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 815 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGISVKHFEELGDI 874 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ ++ L D Sbjct: 875 --ADHCTVCHRCVKPCPVNIDFGDVTVAVRNYLSDAG 909 >gi|289549118|ref|YP_003474106.1| hypothetical protein Thal_1348 [Thermocrinis albus DSM 14484] gi|289182735|gb|ADC89979.1| conserved hypothetical protein [Thermocrinis albus DSM 14484] Length = 242 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + L+ C+ C C+ SCPS + P ++Q R+L E E L ++ Sbjct: 34 DFRFKEYLFGCLNCGVCTASCPSNRFFD---YSPREIVQ--RFL-----EEDVEVLYDMM 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C C CP NP +A ++ + + Sbjct: 84 HEY-IWACSQCFTCWIRCPFVNNPGGLVAIMREVAVR 119 >gi|225568090|ref|ZP_03777115.1| hypothetical protein CLOHYLEM_04163 [Clostridium hylemonae DSM 15053] gi|225163043|gb|EEG75662.1| hypothetical protein CLOHYLEM_04163 [Clostridium hylemonae DSM 15053] Length = 439 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 19/101 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D C+ C C +CPS S L Y D + E L+ Sbjct: 355 KDEVAKYEPTACINCGRCVEACPSRLIPSR--------LADYAEHHDEEAFTKQEGLE-- 404 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 C +C+ CP ++I ++ + +RK Sbjct: 405 --------CMECGSCSYVCPAKRPLKQSIGSMRKIAMANRK 437 >gi|294495823|ref|YP_003542316.1| acetyl-CoA decarbonylase/synthase subunit alpha [Methanohalophilus mahii DSM 5219] gi|292666822|gb|ADE36671.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanohalophilus mahii DSM 5219] Length = 801 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 19/98 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + CV C C CP+ SD +++ +E + L Sbjct: 402 EEEFNELTSRCVHCLACELECPTNLPISDA--------------MNAAEEGDLRPFEILH 447 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D C C Q+CPK + I K ++ Sbjct: 448 DK-----CVACGRCEQACPKDIPVLNVIEKASQRVIRE 480 >gi|148642144|ref|YP_001272657.1| heterodisulfide reductase, subunit C, HdrC [Methanobrevibacter smithii ATCC 35061] gi|148551161|gb|ABQ86289.1| heterodisulfide reductase, subunit C, HdrC [Methanobrevibacter smithii ATCC 35061] Length = 202 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 14/91 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+++CP+ + + E E + L + L+ C Sbjct: 31 KCVQCGMCTSTCPA--------------ARHSNYNPREIMERVFEGDETLLEDEDLWNCF 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G + + IK + + I Sbjct: 77 YCYTCHSTCPVGNSVCEVNQIIKQFAISKGI 107 >gi|292494140|ref|YP_003533283.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] gi|291369361|gb|ADE01591.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] Length = 1008 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 44/151 (29%), Gaps = 17/151 (11%) Query: 117 PHMSVIKDLVVDMSHFYSQ-----HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 P V +D D + R + + L ++ + C Sbjct: 546 PGNVVYRDGPSDPGPDSDRGVGADMRENLRYGPDYQSVEPQTDLDFDDEGGFSHLVELCN 605 Query: 172 MCACC-----STSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDPFR 223 C C +T CP+Y + + R I DE ER Sbjct: 606 GCGTCRQTDSNTMCPTYRASKEEVQTTRGRANMLRAAISGELPEDELYSERFQT----EV 661 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C CP G++ AK +++K Sbjct: 662 LDLCVGCKGCQSDCPTGVDMAKLKSEVKHQY 692 >gi|288939935|ref|YP_003442175.1| hypothetical protein Alvin_0174 [Allochromatium vinosum DSM 180] gi|288895307|gb|ADC61143.1| protein of unknown function DUF224 cysteine-rich region domain protein [Allochromatium vinosum DSM 180] Length = 414 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 +CV C C CP+Y P + + + + + +L+ Sbjct: 25 ADQCVKCGLCLPHCPTYAKTRHEADSPRGRIALVQGWLTGQLDMTPGLAAHLD------G 78 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C +CP + + + + + Sbjct: 79 CLLCRACESACPSLVAYGRLLDGARARHV 107 >gi|222444676|ref|ZP_03607191.1| hypothetical protein METSMIALI_00289 [Methanobrevibacter smithii DSM 2375] gi|261350786|ref|ZP_05976203.1| heterodisulfide reductase, subunit C2 [Methanobrevibacter smithii DSM 2374] gi|222434241|gb|EEE41406.1| hypothetical protein METSMIALI_00289 [Methanobrevibacter smithii DSM 2375] gi|288860404|gb|EFC92702.1| heterodisulfide reductase, subunit C2 [Methanobrevibacter smithii DSM 2374] Length = 202 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 14/91 (15%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C+++CP+ + + E E + L + L+ C Sbjct: 31 KCVQCGMCTSTCPA--------------ARHSNYNPREIMERVFEGDETLLEDEDLWNCF 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C +CP G + + IK + + I Sbjct: 77 YCYTCHSTCPVGNSVCEVNQIIKQFAISKGI 107 >gi|52550001|gb|AAU83850.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos34G5] Length = 826 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 20/85 (23%), Gaps = 24/85 (28%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C C C CP+ S + L Y Sbjct: 411 KKEASRCNSCDICIEVCPNKQAISKAMDDVSALADIY----------------------- 447 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIA 248 C C ++CP+G+ I Sbjct: 448 -DNCIFCGLCERACPEGVPIMDLIM 471 >gi|77165391|ref|YP_343916.1| FAD linked oxidase-like [Nitrosococcus oceani ATCC 19707] gi|254433179|ref|ZP_05046687.1| FAD binding domain protein [Nitrosococcus oceani AFC27] gi|76883705|gb|ABA58386.1| FAD linked oxidase-like protein [Nitrosococcus oceani ATCC 19707] gi|207089512|gb|EDZ66783.1| FAD binding domain protein [Nitrosococcus oceani AFC27] Length = 967 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 H+D+ C C T CPSY + G +R ++ Sbjct: 545 FFDWHKDQGLQGAAARCNGAGVCLKQAGQGTMCPSYMATGEELHGTRGRANIFRQVLALS 604 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 GE L L C C CP G++ +A +K L + Sbjct: 605 GGLTGENSPLL--KEALDLCLACKGCKTECPAGVD----MALMKAEFLQQ 648 >gi|298695568|gb|ADI98790.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus ED133] Length = 984 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 59/215 (27%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S R C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMRPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|239994544|ref|ZP_04715068.1| electron transport complex protein RnfC [Alteromonas macleodii ATCC 27126] Length = 790 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C+ C+ +CP+ + + Y D+ + + L+ C Sbjct: 208 RPCIRCSACADACPASLLPQQ--MFWHAKAKEY-------DKA---------EEYDLFDC 249 Query: 228 HTIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 250 IECGACAYVCPSEIPLVH 267 >gi|303247132|ref|ZP_07333407.1| Formate dehydrogenase [Desulfovibrio fructosovorans JJ] gi|302491558|gb|EFL51443.1| Formate dehydrogenase [Desulfovibrio fructosovorans JJ] Length = 384 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 18/93 (19%) Query: 166 GLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L CV C C +CP + + YL A A + D+ + Sbjct: 256 YLAGCVNCYNCRVACPVCYCRECVFVTDVFDHSPWEYLNWAKRKGALKLPADTL-FYHMT 314 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 RL ++ C C+ +CP G+ + Sbjct: 315 RLAHMSL-----ACVGCGQCSNACPSGVPVMEL 342 >gi|225017719|ref|ZP_03706911.1| hypothetical protein CLOSTMETH_01648 [Clostridium methylpentosum DSM 5476] gi|224949512|gb|EEG30721.1| hypothetical protein CLOSTMETH_01648 [Clostridium methylpentosum DSM 5476] Length = 436 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C +CP + P + +AY D E L L Sbjct: 356 DVLLDQPTTACIRCGKCIGACPVHLM-------PVSIEKAY-------DAQDVEMLQKL- 400 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C+ CP N A+ K ++ +K Sbjct: 401 ---SVNLCINCGCCSYVCPAKRNLAQKNQLAKDLIRQQK 436 >gi|303240126|ref|ZP_07326647.1| electron transport complex, RnfABCDGE type, C subunit [Acetivibrio cellulolyticus CD2] gi|302592395|gb|EFL62122.1| electron transport complex, RnfABCDGE type, C subunit [Acetivibrio cellulolyticus CD2] Length = 439 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 22/126 (17%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + L+T K LL E + C+ C C+ +CP Sbjct: 329 MMGIAQFSLETSVLKHTNALLAFDEKEAVLPKSTACIRCGRCAGACPMNLLPLYLNN--- 385 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI----AKI 250 E ++ L+ + + C +C+ SCP + ++I A++ Sbjct: 386 --------------NSLKENIEELK-KYHVSDCIECGSCSYSCPAKIQLVQSIRLGKAQL 430 Query: 251 KMMLLD 256 + Sbjct: 431 RQAAAK 436 >gi|159043831|ref|YP_001532625.1| formate dehydrogenase subunit alpha [Dinoroseobacter shibae DFL 12] gi|157911591|gb|ABV93024.1| formate dehydrogenase, alpha subunit [Dinoroseobacter shibae DFL 12] Length = 933 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM------------ 129 +G C +C + I+G LA + +G + + +VV+M Sbjct: 52 DGNCRACMVEIEGERVLAASCIREPSEGMVVTTSSARAETARKMVVEMLVTDQPARAEAH 111 Query: 130 ---SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPSYWW 185 +HF+ + + + L C+ C C +C Sbjct: 112 DRSAHFWDMADAAGVTESRFPKLEGPRIPLLDDSHVAMRVNLDACIQCGLCVRACREVQV 171 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D L+DP C C Q+CP G Sbjct: 172 ND--VIGMAGRGHDAYPVFD------------LDDPMGDSTCVACGECVQACPTG 212 >gi|134298308|ref|YP_001111804.1| CoB--CoM heterodisulfide reductase [Desulfotomaculum reducens MI-1] gi|134051008|gb|ABO48979.1| CoB--CoM heterodisulfide reductase [Desulfotomaculum reducens MI-1] Length = 722 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP Y ++Y + + + D + L C Sbjct: 312 YCINCGSCLNFCPIYAEIGEKYGYKYLGGRGLVFTAFHGDLQKTV-------ESGLSLCI 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C SCP +N + + ++ + + Sbjct: 365 GCQKCKNSCPVQMNTPEMLKNLRQEQVQQ 393 >gi|94985024|ref|YP_604388.1| NADH-quinone oxidoreductase, chain I [Deinococcus geothermalis DSM 11300] gi|115502526|sp|Q1IZW5|NUOI_DEIGD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|94555305|gb|ABF45219.1| NADH dehydrogenase subunit I [Deinococcus geothermalis DSM 11300] Length = 179 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 15/123 (12%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + K + V + + + ++ + V+ +P R GL +C+ C+ C+ Sbjct: 4 LDIAKGMGVTLGKLFQKPVTVSYPEERVTLQPRFRGRHVL-TRHPDTGLEKCIGCSLCAA 62 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+Y + D GER + + L RC C ++C Sbjct: 63 VCPAYAIYVEAA------------ENDPLNPTSPGERYAKVYEINML-RCIFCGLCEEAC 109 Query: 238 PKG 240 P G Sbjct: 110 PTG 112 >gi|92113125|ref|YP_573053.1| formate dehydrogenase, alpha subunit [Chromohalobacter salexigens DSM 3043] gi|91796215|gb|ABE58354.1| NAD-dependent formate dehydrogenase iron-sulfur protein / NAD-dependent formate dehydrogenase catalytic subunit [Chromohalobacter salexigens DSM 3043] Length = 953 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 70/254 (27%), Gaps = 58/254 (22%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACVK---- 102 V + L + + P L + + C +C + I+G LA Sbjct: 17 VAVSATAGETLWQVAKRAGESIPHLCFKDASGYRADGNCRACMVEIEGERALAASCLREA 76 Query: 103 ------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ-----------HRSI 139 + + + L V D SHF++ R + Sbjct: 77 APGMVVKSASSERARTAREGVMELLLVDQPVRDDSPDRSSHFWAMADQLAIDATGVRRRL 136 Query: 140 EPWLKTVSPKPAKELLQSHEDRQ----------KIDGLYECVMCACCSTSCPSYWWNSDR 189 + + L H R L C+ C C +C + Sbjct: 137 PARAEREATTVHHVHLPEHSRRASSTRDASHSAMNVNLDACIECNLCVRAC--REVQGND 194 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIA 248 +G A A + + D +DP C C Q+CP G L PA + Sbjct: 195 VIGMAHRGAASKIVFD------------FDDPMGDSTCVACGECVQACPTGALMPATLVD 242 Query: 249 KIKM---MLLDRKI 259 + + DR + Sbjct: 243 EAGRGDSRVADRSV 256 >gi|134298020|ref|YP_001111516.1| hypothetical protein Dred_0142 [Desulfotomaculum reducens MI-1] gi|134050720|gb|ABO48691.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfotomaculum reducens MI-1] Length = 418 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 20/123 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 S++ ++ + ++ K +C+ C C+ CP + Sbjct: 1 MSENAKVQEPEVINFSNMDPKFRDEVMEKLKNIDWTQCLACGMCTAGCPYADVHG----- 55 Query: 193 PAILLQAYRWLIDSRDEFQGERL----DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 D R + L + L+DPF ++ C CT CP G+N Sbjct: 56 ----------NNDPRKFLRKLVLGLREEALKDPF-IWNCTVCERCTVECPMGINFGIITR 104 Query: 249 KIK 251 ++ Sbjct: 105 GMR 107 >gi|253688410|ref|YP_003017600.1| electron transport complex, RnfABCDGE type, C subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494051|sp|C6DH15|RNFC_PECCP RecName: Full=Electron transport complex protein rnfC gi|251754988|gb|ACT13064.1| electron transport complex, RnfABCDGE type, C subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 747 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 19/128 (14%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V K +V M ++ + L SH + + + C+ C+ C+ Sbjct: 326 GFHVNKQPMVVMGGPL-MGFTLPSLDVPIVKISNCLLAPSHTEMEPVAEEQSCIRCSQCA 384 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ Y SR + + + L+ C C C Sbjct: 385 DACPAGLLPQQLYWF-------------SRGQEHEKARN-----HHLFDCIECGACAYVC 426 Query: 238 PKGLNPAK 245 P + + Sbjct: 427 PSNIPLVQ 434 >gi|332290718|ref|YP_004429327.1| D-lactate dehydrogenase (cytochrome) [Krokinobacter diaphorus 4H-3-7-5] gi|332168804|gb|AEE18059.1| D-lactate dehydrogenase (cytochrome) [Krokinobacter diaphorus 4H-3-7-5] Length = 971 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + L+ +++ + +C C CPSY D Sbjct: 533 RYEVDRKEPAVETLMNFEDNQGILRLAEKCNGSGDCRKLPSAGGAMCPSYRATRDEKDTT 592 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + + + + D+ E C + C CP ++ A Sbjct: 593 RARANALREFLTT--SNKSNKYDHTELKEVFDLCLSCKACASECPSNVDVATL 643 >gi|261821594|ref|YP_003259700.1| electron transport complex protein RnfC [Pectobacterium wasabiae WPP163] gi|261605607|gb|ACX88093.1| electron transport complex, RnfABCDGE type, C subunit [Pectobacterium wasabiae WPP163] Length = 737 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 19/128 (14%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V K +V M ++ + L SH + + + C+ C+ C+ Sbjct: 326 GFHVNKQPMVVMGGPL-MGFTLPSLDVPIVKISNCLLAPSHSEMEPVAEEQSCIRCSKCA 384 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ Y SR + + + L+ C C C Sbjct: 385 DACPAGLLPQQLYWF-------------SRGQEHEKARN-----HHLFDCIECGACAYVC 426 Query: 238 PKGLNPAK 245 P + + Sbjct: 427 PSNIPLVQ 434 >gi|300855580|ref|YP_003780564.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528] gi|300435695|gb|ADK15462.1| predicted Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528] Length = 757 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 14/123 (11%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 Q IE ++ E+ Q+ C+ C+ +CP + Sbjct: 273 QLDDIETVEPIKRTSSVYNEKEAIEEAQRCLKCE----CSQCAKNCPHLRKYNTE----- 323 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + R + + + G+ N + C C + CP L+ I + + + Sbjct: 324 -PRKYIRQINHNENIVLGDHYAN----EMINSCTLCGLCGEVCPSNLDMKDIIQETRESM 378 Query: 255 LDR 257 ++R Sbjct: 379 VER 381 >gi|288961355|ref|YP_003451694.1| protein [Azospirillum sp. B510] gi|288913663|dbj|BAI75150.1| protein [Azospirillum sp. B510] Length = 507 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 22/97 (22%), Gaps = 18/97 (18%) Query: 161 RQKIDGLYECVMCACCSTSCP----SYWWNSDR-----YLGPAILLQAYRWLIDSRDEFQ 211 + + C CP + Y +A + D Sbjct: 215 AACTYAMAGFMREQMCFYVCPWPRIQAAMLDEESMVVTYQEWRGEGRAPLRKSEGWDTRT 274 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C +C Q CP G++ I Sbjct: 275 ---------HQGLGDCIDCGHCVQVCPTGIDIRDGIQ 302 >gi|126437797|ref|YP_001073488.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Mycobacterium sp. JLS] gi|126237597|gb|ABO00998.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Mycobacterium sp. JLS] Length = 1202 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 26/102 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----L 215 D + C+ C C+ CP +++ + D D L Sbjct: 693 DLVAVWDPDTCIQCGNCAFVCP------------HSVIRTKLYDADRLDGAPDAFASAPL 740 Query: 216 DNLEDPFR-------LYRCHTIMNCTQSCPK---GLNPAKAI 247 + + P + C C ++CP G+ KAI Sbjct: 741 NAVGLPESRYTLQVYVEDCTGCGLCVEACPAVAPGIPLTKAI 782 >gi|309782272|ref|ZP_07677000.1| cytochrome c oxidase accessory protein CcoG [Ralstonia sp. 5_7_47FAA] gi|308918965|gb|EFP64634.1| cytochrome c oxidase accessory protein CcoG [Ralstonia sp. 5_7_47FAA] Length = 487 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +E W ++ P +L G + C CP Y + P + Sbjct: 194 METWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCP-YARFQSVMVDPDTYVL 249 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNP 243 Y L R E +G R N + + L C C Q CP G++ Sbjct: 250 TYDTL---RGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDI 292 >gi|237736261|ref|ZP_04566742.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium mortiferum ATCC 9817] gi|229421609|gb|EEO36656.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium mortiferum ATCC 9817] Length = 436 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 22/144 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L + V +++V + + + K LL ++ C+ C Sbjct: 309 YILDYCGVNREVVDKLVMGGPMMGMAQFSEEAPVIKGTSGLLALTKEETNPYKTRPCIGC 368 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP L P + + + E+ + L + L C +C Sbjct: 369 GKCVEACPM-------GLEPLMFARLASF----------EQWEQL-GQYNLMDCIECGSC 410 Query: 234 TQSCPKGLNPAKAI----AKIKMM 253 CP +AI +K++ M Sbjct: 411 AYICPANRPLTEAIKIGKSKLRAM 434 >gi|188587258|ref|YP_001918803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351945|gb|ACB86215.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 339 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 18/101 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----RLD 216 L C C C +CP + R D D+ + Sbjct: 217 FWKKQLNRCKRCYSCRNACPVCTCRVCLFD---------RENPDYLDKATDQLAQHQFYH 267 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + RC C++ CP+ + + L+ Sbjct: 268 VIRAFHVSDRCVGCGECSRVCPENIPL----HLLNQKLVKE 304 >gi|158522547|ref|YP_001530417.1| Na(+)-translocating NADH-quinone reductase subunit A [Desulfococcus oleovorans Hxd3] gi|158511373|gb|ABW68340.1| Na-translocating NADH-quinone reductase subunit A [Desulfococcus oleovorans Hxd3] Length = 446 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 D CV C C+T CP + P ++A GE ++ Sbjct: 361 PMDAGMHGEERACVNCGTCATVCPV-------DILPQFTVKA---------VLAGEVEES 404 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L L C C CP + + + + Sbjct: 405 L--AHGLLDCVECGLCAYVCPSKIELTEHLKTARQAY 439 >gi|325968335|ref|YP_004244527.1| formate dehydrogenase, subunit alpha [Vulcanisaeta moutnovskia 768-28] gi|323707538|gb|ADY01025.1| formate dehydrogenase, alpha subunit [Vulcanisaeta moutnovskia 768-28] Length = 897 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 25/179 (13%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 PTL G C C + ++G +C+ + + I + K L+ + Sbjct: 33 PTLCYYEGYANGSCRICVVEVNGRLMPSCITKVSE-GMKIETESIRATEARKTLLRLLLK 91 Query: 132 FY------SQHR-SIEPWLKTVSPKPAKELLQSHEDRQKI---DGLYECVMCACCSTSCP 181 + Q R + + +PA + D CVMC C +C Sbjct: 92 NHTHRSKEEQMRCRLCDYAIKYGLEPAPIIPDIKIDDTHPAIVFNPSACVMCRKCVIACS 151 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N + +D+R F L+ P + C + C +CP G Sbjct: 152 IDQSNDTITVIGRG--------LDTRVGFD------LDVPMGVSSCVSCGACIDACPTG 196 >gi|258653105|ref|YP_003202261.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] gi|258556330|gb|ACV79272.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] Length = 966 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 7/93 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + CV C C CPS D P + R + +R+ L LE + Sbjct: 555 EPEVDRCVECGYCEPVCPSR----DLTTTPRQRIVLRREMQRAREAGDTALLAELETEYE 610 Query: 224 LYRCHTI---MNCTQSCPKGLNPAKAIAKIKMM 253 T C SCP +N + +++ Sbjct: 611 YDGVQTCAVDGMCQTSCPVLINTGDLVRRLRAE 643 >gi|254428110|ref|ZP_05041817.1| electron transport complex, RnfABCDGE type, C subunit subfamily, putative [Alcanivorax sp. DG881] gi|196194279|gb|EDX89238.1| electron transport complex, RnfABCDGE type, C subunit subfamily, putative [Alcanivorax sp. DG881] Length = 986 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 22/92 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ CP+ L P L + + L+ + L C Sbjct: 394 CIRCGSCAEVCPAN-------LLPQQLYWH----------AKNDDLEKAQ-HHNLMDCIE 435 Query: 230 IMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 C CP + + A +++ D+ Sbjct: 436 CGACAYVCPSHIPLVQYYRYAKGEVRQQAADQ 467 >gi|119719507|ref|YP_920002.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524627|gb|ABL77999.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 446 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 19/107 (17%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---------------WLIDSRDE 209 L CV CA C +CP Y + Y GP + R WL ++ Sbjct: 28 HFLENCVSCALCEVNCP-YTPVGEEY-GPVSKAEPLRNIYRGKVNILPRLFPWLFGAKLP 85 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 E LD D Y C C +CP G++ + I ++ L Sbjct: 86 KTKEELDKWVDL--AYHCTNCGLCYITCPFGIHSGEMIKTLRGFLAK 130 >gi|82617263|emb|CAI64169.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] gi|268322996|emb|CBH36584.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] Length = 818 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 21/88 (23%), Gaps = 24/88 (27%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C C C CP+ S + L Y Sbjct: 408 AELKKEASRCNSCDLCIEVCPNKQTISKAMDDVSALADIY-------------------- 447 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 C C ++CP+G+ I Sbjct: 448 ----DNCIFCGLCEKACPEGVPIMDLIM 471 >gi|82617151|emb|CAI64058.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] Length = 818 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 21/88 (23%), Gaps = 24/88 (27%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C C C CP+ S + L Y Sbjct: 408 AELKKEASRCNSCDLCIEVCPNKQTISKAMDDVSALADIY-------------------- 447 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 C C ++CP+G+ I Sbjct: 448 ----DNCIFCGLCEKACPEGVPIMDLIM 471 >gi|302339798|ref|YP_003805004.1| aldo/keto reductase [Spirochaeta smaragdinae DSM 11293] gi|301636983|gb|ADK82410.1| aldo/keto reductase [Spirochaeta smaragdinae DSM 11293] Length = 373 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 8/85 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C C C CP + + + D +G + D + C Sbjct: 291 PCTDCRYCVEGCPQNIVIPQIFRAMNTY-----LVYKNLDGAKGSYMWETRDGGKASECI 345 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 +C +CP+ ++ IA++K Sbjct: 346 ECGSCEAACPQHISI---IAELKKA 367 Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP+ + + + L+ + + Sbjct: 292 CTDCRYCVEGCPQNIVIPQIFRAMNTYLVYKNL 324 >gi|152979395|ref|YP_001345024.1| electron transport complex protein RnfC [Actinobacillus succinogenes 130Z] gi|171704327|sp|A6VQ42|RNFC_ACTSZ RecName: Full=Electron transport complex protein rnfC gi|150841118|gb|ABR75089.1| electron transport complex, RnfABCDGE type, C subunit [Actinobacillus succinogenes 130Z] Length = 703 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 23/90 (25%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ CS +CP + Y W + D + + ++ C Sbjct: 378 CIRCSACSDACPVHLMPQQMY-----------WYARAEDHEKSNQYQLMD-------CIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + I + KI Sbjct: 420 CGLCAYVCPSHIPL---IQYFRQE--KAKI 444 >gi|170726904|ref|YP_001760930.1| electron transport complex protein RnfC [Shewanella woodyi ATCC 51908] gi|169812251|gb|ACA86835.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella woodyi ATCC 51908] Length = 784 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 46/155 (29%), Gaps = 29/155 (18%) Query: 114 YPLPHMSVIKDLV------VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 P+ H+ D V + + T+ L ++E + L Sbjct: 323 TPISHLLSQTDFKGLDTDKVIIGGPMMGYALYNDSAPTLKGTNCILLPNANEMAPEQKEL 382 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ CP+ L Q E+ NL D C Sbjct: 383 -PCIRCGECAVVCPAQLLPQQ--LFWHSKAQ----------EYDKAVSYNLND------C 423 Query: 228 HTIMNCTQSCPKGLNPAK----AIAKIKMMLLDRK 258 C+ CP + + A + +K + ++K Sbjct: 424 IECGCCSYVCPSNIPLVEYYRVAKSAVKNEIEEKK 458 >gi|325105987|ref|YP_004275641.1| protein of unknown function DUF162 [Pedobacter saltans DSM 12145] gi|324974835|gb|ADY53819.1| protein of unknown function DUF162 [Pedobacter saltans DSM 12145] Length = 463 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 19/97 (19%) Query: 169 ECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP Y Y GP + L ++D Sbjct: 310 YCIRCGACLNGCPIYKNIGGYTYDTTYSGPIGSII-------------TPHLQGMKDFKH 356 Query: 224 L-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L Y C++ CP ++ K + + +++ + Sbjct: 357 LSYASSLCGKCSEVCPVKIDIHKMLLLNRRDAVNQNL 393 >gi|39996720|ref|NP_952671.1| iron-sulfur cluster binding protein [Geobacter sulfurreducens PCA] gi|39983601|gb|AAR34994.1| iron-sulfur cluster binding protein, putative [Geobacter sulfurreducens PCA] gi|298505732|gb|ADI84455.1| iron-sulfur cluster-binding protein, putative [Geobacter sulfurreducens KN400] Length = 708 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 23/103 (22%), Gaps = 13/103 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQ 211 CV C C+ CP Y G + D+ Sbjct: 284 RTRLAADPDFSEALACVKCGACANVCPIYEIVGGHVFGHIYVGGIGLVLTPFFHGLDKA- 342 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C + C ++ I ++ + Sbjct: 343 ---------EDILKLCIGCRKCNEVCAAKIDIEGLIVDLRDKI 376 >gi|189346514|ref|YP_001943043.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium limicola DSM 245] gi|189340661|gb|ACD90064.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium limicola DSM 245] Length = 441 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C ++CP + L P RD E C Sbjct: 366 CIRCSRCISACP-------QNLQP----WLLANTAQLRDFETIELYGMAN-------CTE 407 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP I K + RK Sbjct: 408 CGSCSYVCPSKRELVHWIKYAKTLASKRK 436 >gi|330835229|ref|YP_004409957.1| FAD linked oxidase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567368|gb|AEB95473.1| FAD linked oxidase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 989 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 11/100 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL-----QAYRWLIDSRDEFQGERLD 216 D +C+ CA C T CP Y P + + ++ + + + Sbjct: 508 MFTDYAIKCIDCAMCVTVCPQYKLIPQWPYAPKGMFDFTKGLISAFELNGKIDVPESAIA 567 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + CH C CP + + + ++ M++ Sbjct: 568 EIS------GCHKCGLCDGVCPARIPISSMLIRLSSMVVR 601 >gi|326801236|ref|YP_004319055.1| D-lactate dehydrogenase (cytochrome) [Sphingobacterium sp. 21] gi|326552000|gb|ADZ80385.1| D-lactate dehydrogenase (cytochrome) [Sphingobacterium sp. 21] Length = 976 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 15/129 (11%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSD 188 + S + + + +C C T CPSY + Sbjct: 532 MDKFLRYETDTSAIHINTIFDYQKQENILRLAEKCSGSGDCRKSHITGGTMCPSYMATRE 591 Query: 189 RYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R +L S + R D+ E + C + C CP ++ K Sbjct: 592 EKDTTRARANMLRQFLTHS---TKKNRFDHAEIKEVMDLCLSCKACKTECPSAVDVTK-- 646 Query: 248 AKIKMMLLD 256 +K L Sbjct: 647 --MKAEFLQ 653 >gi|119945401|ref|YP_943081.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Psychromonas ingrahamii 37] gi|119864005|gb|ABM03482.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Psychromonas ingrahamii 37] Length = 479 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 17/103 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + ++ + C+ C C C Y Y GP + +DS + + Sbjct: 303 AEGMEAMLRCIRCGACMNHCVVYKHIGGHAYGSVYPGPMGSV--LTPHLDSLEVANKQT- 359 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + CP + + ++ D+K Sbjct: 360 ---------HACTMNGRCEEVCPVNIPLPTLLRSLRAQSWDKK 393 >gi|85713242|ref|ZP_01044268.1| electron transport complex protein RnfC [Idiomarina baltica OS145] gi|85692937|gb|EAQ30909.1| electron transport complex protein RnfC [Idiomarina baltica OS145] Length = 624 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 22/93 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ CP+ + Q +WL ++D E L+ C Sbjct: 377 CIRCGACAEVCPA-----------TLQPQQLQWLAKAKDYPALE-------ENNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPA----KAIAKIKMMLLDRK 258 C CP + +A ++++ ++ Sbjct: 419 CGACAFVCPSEIPLVHYYRQAKSQMRNQAREQA 451 >gi|313619417|gb|EFR91131.1| PduS type ferredoxin, putative [Listeria innocua FSL S4-378] Length = 455 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 9/124 (7%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ + +L ++ + C+ C+ CS CP D + P + Sbjct: 227 KTTSGMIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKV 284 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLL 255 ++ + D D + C C +CP GL+P + +K LL Sbjct: 285 MRHFAVAEDITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELL 338 Query: 256 DRKI 259 + + Sbjct: 339 KQGV 342 >gi|310777823|ref|YP_003966156.1| electron transport complex, RnfABCDGE type, C subunit [Ilyobacter polytropus DSM 2926] gi|309747146|gb|ADO81808.1| electron transport complex, RnfABCDGE type, C subunit [Ilyobacter polytropus DSM 2926] Length = 436 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 25/134 (18%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D +V + E L ++ C++C C +CP Sbjct: 322 DKLVMGGPMMGMAQHTENVPVVKGTSGL---LALTKEETNPYKPKSCILCGKCVKACPIN 378 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 L P + + R+ + E L C +C+ CP Sbjct: 379 -------LLPNMYAKLARF------KQWEE-----MGKNHLMDCIECGSCSYICPANRPL 420 Query: 244 AKAI----AKIKMM 253 +AI AK++ M Sbjct: 421 TEAIKIGKAKLRTM 434 >gi|289207821|ref|YP_003459887.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. K90mix] gi|288943452|gb|ADC71151.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. K90mix] Length = 238 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 11/78 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 ++ C C C+ SC Y N + W+ +R + E ++D ++ Sbjct: 59 YVHRCWQCGSCTNSCTMYAQN--------VQFNPRYWIYLTRLGMKEE---LVKDQDIIW 107 Query: 226 RCHTIMNCTQSCPKGLNP 243 +C + CT CPK + P Sbjct: 108 QCVSCNKCTNICPKDVKP 125 >gi|224369472|ref|YP_002603636.1| RnfC1 [Desulfobacterium autotrophicum HRM2] gi|223692189|gb|ACN15472.1| RnfC1 [Desulfobacterium autotrophicum HRM2] Length = 455 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C +CP L P L A R+ L + + C Sbjct: 383 CVRCGRCVEACPMN-------LVPTRLAMAARYKN-----------TALARQYNINACFE 424 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +CT CP + + I K + Sbjct: 425 CGSCTYVCPANIKLVQLIRTGKAQVAAA 452 Score = 35.5 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 9/21 (42%) Query: 226 RCHTIMNCTQSCPKGLNPAKA 246 C C ++CP L P + Sbjct: 382 ACVRCGRCVEACPMNLVPTRL 402 >gi|59711540|ref|YP_204316.1| electron transport complex protein RnfC [Vibrio fischeri ES114] gi|59479641|gb|AAW85428.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein (Rnf/Rsx reducing system) [Vibrio fischeri ES114] Length = 827 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ + ++ + C+ C+ C+ +CP+ Y W Sbjct: 355 PITKITNCIITPDKKELPLYNHEMACIRCSSCADACPTSLLPQQLY-----------WYS 403 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 S D + + + L C C CP + + + K + RK Sbjct: 404 KSEDYDKC-------NEYNLNDCIECGACAYVCPSEIPLVQYYRQAKSEIYSRK 450 >gi|86132296|ref|ZP_01050891.1| FAD linked oxidase-like protein [Dokdonia donghaensis MED134] gi|85817215|gb|EAQ38398.1| FAD linked oxidase-like protein [Dokdonia donghaensis MED134] Length = 970 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 66/226 (29%), Gaps = 31/226 (13%) Query: 45 MDTYYVDLDNC-----GPMVLDGLLYIKNKIDPTLTLR------------RSCREGICGS 87 MD Y D G + L +L +K K D +L R + Sbjct: 425 MDRYEQDAVYYAHAGAGELHLRPILDLKKKEDVSL-FRQITTDVAHLVKKYNGSMSGEHG 483 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+ L K ++ A+ PH ++D R + Sbjct: 484 DGIVRAEFIPLMVGKKNYEMMKAVKSAFDPHHIFNAGKIIDAFPMDQNLR----YEVGRQ 539 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGPAILLQAY 200 + LL ++++ + +C C CPSY D Sbjct: 540 EAEVETLLNFNDNQGILRLAEKCNGSGDCRKMPSAGGAMCPSYRATRDEKDTTRARANTL 599 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R + + ++ L+D F L C + C CP ++ A Sbjct: 600 REFLTTSEKANKYNHKELKDVFDL--CLSCKACASECPSNVDVATL 643 >gi|303327124|ref|ZP_07357566.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfovibrio sp. 3_1_syn3] gi|302863112|gb|EFL86044.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Desulfovibrio sp. 3_1_syn3] Length = 406 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFRLYR 226 +C+ C C CP ++LGP ++ AY R+ RL L + L+ Sbjct: 8 DKCIACTTCVVHCPVAEATP-KFLGPRMIGPAYERF-----------RLLGLAEDPSLHY 55 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C NC SCP + P +I + Sbjct: 56 CANCKNCDISCPHDV-PVSSINMLARA 81 >gi|256829568|ref|YP_003158296.1| FAD linked oxidase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578744|gb|ACU89880.1| FAD linked oxidase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 1183 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 48/173 (27%), Gaps = 30/173 (17%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVV--DMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 A ++ K ++ P +DLVV F + I LL Sbjct: 666 AALRTYKKKVDPNNIF-NPGKLTQRDLVVVPYTFSFNRLIKDINKTALPGKESLINLLLN 724 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYW---------WNSDRYLGPAILLQAYRWLIDSR 207 C C C CP Y N + LG + Y L + Sbjct: 725 VQ----------TCTRCGKCKQVCPMYLPQKGLLFHPRNKNITLGALVEAIYYSQLQNGE 774 Query: 208 DEFQ--GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + GE LE C C CP + +++ L ++ Sbjct: 775 PETRLLGELRKILE------HCTACGKCYAICPVKIRTQDVTLQMRAYLEEKG 821 >gi|189220395|ref|YP_001941035.1| Ferredoxin [Methylacidiphilum infernorum V4] gi|189187253|gb|ACD84438.1| Ferredoxin [Methylacidiphilum infernorum V4] Length = 375 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 22/115 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-------------LID 205 E + D C+ C+ C+ CP+ + + +A RW L Sbjct: 258 EHPRWDDVAGRCIACSTCTMVCPTCFCWTVEDSISMEGKRAERWRRWDFCYTMEFSHLPS 317 Query: 206 S--RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L F + C C CP G++ + IA ++ Sbjct: 318 GSVRSSIKSRYRQWLSHKFGSWIDQFGTSGCVGCGRCITWCPVGIDVTEEIAALR 372 >gi|119774967|ref|YP_927707.1| electron transport complex protein RnfC [Shewanella amazonensis SB2B] gi|119767467|gb|ABM00038.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 880 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 22/103 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + ++ C+ C C+ +CP+ L P L + E D + Sbjct: 369 EITEMPPEKPCIRCGECAVACPAS-------LLPQQLFWH----------AKAEEYDKAQ 411 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDRK 258 + L C CT CP + + A A I+ ++ Sbjct: 412 -SYNLKDCIECGCCTYVCPSDIPLVEYYRVAKAAIRQQAEEKA 453 >gi|284162360|ref|YP_003400983.1| heterodisulfide reductase [Archaeoglobus profundus DSM 5631] gi|284012357|gb|ADB58310.1| heterodisulfide reductase, putative [Archaeoglobus profundus DSM 5631] Length = 421 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 13/92 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L +C+ CA CS CP + + P + +W + R L+DP ++ Sbjct: 18 DLKKCMQCANCSVVCP---LSPEDDPFPRKEMIWAQWGL---------RKRLLKDPN-VW 64 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C+ +C+ CP+ P + + I+ ++ Sbjct: 65 LCYNCADCSAYCPRDAKPGQVLNAIRARVISE 96 >gi|257438964|ref|ZP_05614719.1| oxidoreductase [Faecalibacterium prausnitzii A2-165] gi|257198549|gb|EEU96833.1| oxidoreductase [Faecalibacterium prausnitzii A2-165] Length = 369 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 37/136 (27%), Gaps = 11/136 (8%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P M ++ + M ++ + + L C C C Sbjct: 236 PGMMMVLSGMSSMEQMKDNLSYMKDFQPLNETELEAVKKVQS--IFCGMNLIPCTACRYC 293 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR--LYRCHTIMNCT 234 + CP D + + W D +N+ C C Sbjct: 294 TDGCPRQIAIPDLFAVMNTKQIYHDWNAD-------FYYNNVYTGAGRRASDCIQCGRCE 346 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ L + + +I Sbjct: 347 KACPQHLPIRRLLTEI 362 >gi|197334471|ref|YP_002155696.1| electron transport complex protein RnfC [Vibrio fischeri MJ11] gi|197315961|gb|ACH65408.1| electron transport complex protein RnfC [Vibrio fischeri MJ11] Length = 784 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ + ++ + C+ C+ C+ +CP+ ++L Q W Sbjct: 355 PITKITNCIITPDKKELPLYNHEMACIRCSSCADACPT-----------SLLPQQLYWYS 403 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 S D + + + L C C CP + + + K + RK Sbjct: 404 KSEDYDKC-------NEYNLADCIECGACAYVCPSEIPLVQYYRQAKSEIYSRK 450 >gi|195953541|ref|YP_002121831.1| protein of unknown function DUF224 cysteine-rich region domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195933153|gb|ACG57853.1| protein of unknown function DUF224 cysteine-rich region domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 404 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C + CP+Y N + L + ++ + ++ C Sbjct: 15 KCVRCGLCKSVCPTYRVNEEERSFARGRLALAQMVLSGELPLTKDVARQWDE------CA 68 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMM 253 C CP + + ++K K + Sbjct: 69 MCRRCEWICPNNVEYKEIMSKAKEL 93 >gi|117925215|ref|YP_865832.1| FAD linked oxidase domain-containing protein [Magnetococcus sp. MC-1] gi|117608971|gb|ABK44426.1| FAD linked oxidase domain protein [Magnetococcus sp. MC-1] Length = 1282 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 9/102 (8%) Query: 164 IDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D + C+ C C C ++ + ++ L ++++A+ + +R + Sbjct: 808 NDMVRNCLRCGKCKPHCSTHVPQANLLYSPRNKILAAGLMIEAFLYEEQTRRGISVRHFE 867 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D C C CP ++ K ++ +L +RK Sbjct: 868 EMNDL--ADHCTVCHKCFNPCPVNIDFGKVTMAMRGVLNNRK 907 >gi|255533704|ref|YP_003094076.1| hypothetical protein Phep_3823 [Pedobacter heparinus DSM 2366] gi|255346688|gb|ACU06014.1| protein of unknown function DUF162 [Pedobacter heparinus DSM 2366] Length = 463 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 24/89 (26%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP Y + + E +L L Sbjct: 310 YCIRCGACLNACPVYKNIGGHTYNTTYSGPIGSIIT-PHLKGMKE-FKHLSYASSL---- 363 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C++ CP ++ K + + Sbjct: 364 -CGKCSEVCPVKIDIHKMLLLNRRDAAAE 391 >gi|218886954|ref|YP_002436275.1| hypothetical protein DvMF_1863 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757908|gb|ACL08807.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 430 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 6/88 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + C+ C C CP + + L + D + Sbjct: 15 DDQMVGCMKCGMCQAVCPVFAETMKEADVTRGKIALLENL------AKEMIHDAAGVQEK 68 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L +C +C +CP G+ + + Sbjct: 69 LNKCLLCGSCGANCPSGVKVMDIFLRAR 96 >gi|78358563|ref|YP_390012.1| heterodisulfide reductase subunit C [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220968|gb|ABB40317.1| heterodisulfide reductase, C subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 185 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +Q + C C C+ CP +S + Q R + + E Sbjct: 19 QQQSEQNMALCYQCGNCTAGCPVARASSTP------VTQVMRLVQAGQREA-------AL 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ C + CT CP ++ A+ + ++ M Sbjct: 66 GADSIWLCASCETCTTRCPNDIDVARVMDVLRHMARRE 103 >gi|88799939|ref|ZP_01115511.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Reinekea sp. MED297] gi|88777370|gb|EAR08573.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Reinekea sp. MED297] Length = 601 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 29/120 (24%), Gaps = 18/120 (15%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + L + ++ C+ C C +CP L P + Sbjct: 348 VPDIAAPIMKSTNCLLAPTKKELPPAIEDSPCIRCGLCEQACPV-------DLLPQQMHW 400 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 A R + L C C CP + + K L + Sbjct: 401 A-----------SKHRELESAELHSLEDCIECGACAYVCPSRIPLVQYFRYAKGELKQER 449 >gi|163756482|ref|ZP_02163595.1| probable oxidoreductase [Kordia algicida OT-1] gi|161323590|gb|EDP94926.1| probable oxidoreductase [Kordia algicida OT-1] Length = 972 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 9/118 (7%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWN 186 ++ + + + + + + + + +C C T CPSY Sbjct: 526 AKMDTSLRYEIDRTEPEIETIFDFSDSQGILRAAEKCNGSGDCRKPASFSGTMCPSYRAT 585 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 ++ A R + + + D E C + C CP ++ A Sbjct: 586 TNEKDTTRARANALREFL--TVSEKENKFDQPELKEVFDLCLSCKACASECPSNVDVA 641 >gi|15899539|ref|NP_344144.1| formate dehydrogenase Alpha subunit (fdhF-2) [Sulfolobus solfataricus P2] gi|284173469|ref|ZP_06387438.1| formate dehydrogenase Alpha subunit (fdhF-2) [Sulfolobus solfataricus 98/2] gi|13816176|gb|AAK42934.1| Formate dehydrogenase Alpha subunit (fdhF-2) [Sulfolobus solfataricus P2] gi|261601311|gb|ACX90914.1| formate dehydrogenase, alpha subunit [Sulfolobus solfataricus 98/2] Length = 979 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 44/171 (25%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDM------------KDIKGAIAV-YPLPHMSVIKDLVVDM 129 C SC + ++G AC + A+ L + + + + Sbjct: 47 ESCDSCLVEVNGKLVRACSTRVEDGMSISVNSKRAMEARKTAISRILRYHKLYCSICENN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H ++ K I +C++C C +C + N Sbjct: 107 NGDCVLHEAVIKLNINSQKYVEKPYQTDESGPFYIYDPSQCILCGRCVEACQDFAVNEVI 166 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D + + +P C C CP Sbjct: 167 WINW--------------DLNPPRVVWDNGNPIGNSSCVNCGTCVTVCPVN 203 >gi|197123463|ref|YP_002135414.1| FAD linked oxidase [Anaeromyxobacter sp. K] gi|196173312|gb|ACG74285.1| FAD linked oxidase domain protein [Anaeromyxobacter sp. K] Length = 967 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CPS + R + D ERL++ Sbjct: 541 HAHPILDRCIECGFCEPRCPSRDLTLTPRQRIVAQREIARLRVTGEDPAALERLEHDYVY 600 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G++ + ++ Sbjct: 601 LGEQTCAVDGLCATACPVGIDTGEHTKWLR 630 >gi|220918268|ref|YP_002493572.1| FAD linked oxidase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956122|gb|ACL66506.1| FAD linked oxidase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 961 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C CPS + R + D ERL++ Sbjct: 541 HAHPILDRCIECGFCEPRCPSRDLTLTPRQRIVAQREIARLRVTGEDPAALERLEHDYVY 600 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP G++ + ++ Sbjct: 601 LGEQTCAVDGLCATACPVGIDTGEHTKWLR 630 >gi|161527747|ref|YP_001581573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339048|gb|ABX12135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosopumilus maritimus SCM1] Length = 178 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 CV C + CP ++ W PA + + E Q ERLD + + Sbjct: 70 DSCVAAGSCMSVCPVQTFQWYRTEKDIPAKDVNGATFDGTGLTE-QDERLDYTDKSQPIR 128 Query: 225 -YRCHTIMNCTQSCPKG 240 + C M C ++CP Sbjct: 129 EHDCTQCMACQEACPTH 145 >gi|328952188|ref|YP_004369522.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452512|gb|AEB08341.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] Length = 425 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 8/100 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + C+ C CS CP S + + R + DE + Sbjct: 20 DIIPESYMQACLTCGTCSAGCPLTGMESYQDENWDARM-VLRMAMLGMDE-------EVI 71 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ C C CP G+ K K K+ Sbjct: 72 NSRFVWICTGCQRCEYGCPMGIKLVKVWIAAKGARPREKV 111 >gi|288561331|ref|YP_003424817.1| formate dehydrogenase beta chain FdhB2 [Methanobrevibacter ruminantium M1] gi|288544041|gb|ADC47925.1| formate dehydrogenase beta chain FdhB2 [Methanobrevibacter ruminantium M1] Length = 384 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 69/249 (27%), Gaps = 31/249 (12%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTL 74 G T ++ ++++ Y +P D ++D ++ K L Sbjct: 125 GGTVRPETAQEMIEKF--YEVDPA-------DVVKEEIDKGKFIIEMADGSEKGIKIDDL 175 Query: 75 TLRRSCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSV-----------I 122 R C C + + LAC + + V + Sbjct: 176 EDEGYGRRDNCQRCELKVPRNADLACGNWGSEPGWTFVEVNTEKGNEIIEGAKAEGFIET 235 Query: 123 KDLVVDMSHFYSQHRSIE-PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 KD + +I K + K ++ + E+ + +C+ C C CP Sbjct: 236 KDPSEKALEMRGKVENIMIKMGKRNTKKQLEDEALTLEEWENQWN--KCIKCFACRDVCP 293 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 W + L+ + D + + C C CP + Sbjct: 294 ICWCHECE-------LEKSYFKDDGQAPPDPLSFHGVRLSHMSPSCVNCGQCDDVCPMEI 346 Query: 242 NPAKAIAKI 250 +K K+ Sbjct: 347 PVSKLFHKL 355 >gi|260432407|ref|ZP_05786378.1| cytochrome c oxidase accessory protein CcoG [Silicibacter lacuscaerulensis ITI-1157] gi|260416235|gb|EEX09494.1| cytochrome c oxidase accessory protein CcoG [Silicibacter lacuscaerulensis ITI-1157] Length = 489 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 8/70 (11%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + +++ W + R + + L C C Sbjct: 231 CIYACPWPRIQAAMMDEDTLVVGYREWRGEPRGKGKNR--------EGLGDCIDCYACVN 282 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 283 VCPMGIDIRD 292 >gi|327393782|dbj|BAK11204.1| electron transport complex protein RnfC [Pantoea ananatis AJ13355] Length = 814 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y W D + + C Sbjct: 377 CIRCSACADACPAKLLPQQLY-----------WYSKGGDHDKAR-------AHHIDDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|300854322|ref|YP_003779306.1| putative electron transport complex protein RnfC [Clostridium ljungdahlii DSM 13528] gi|300434437|gb|ADK14204.1| predicted electron transport complex protein RnfC [Clostridium ljungdahlii DSM 13528] Length = 457 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 17/86 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP + L P++L Q + ++ + L C Sbjct: 363 SSCIRCGRCLKACPMH-------LNPSMLSIL----------GQKDLYQEAKEEYNLLDC 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMM 253 +C +CP + I +K Sbjct: 406 VECGSCVYTCPAKRKIVQYIRYLKSE 431 >gi|297570868|ref|YP_003696642.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Arcanobacterium haemolyticum DSM 20595] gi|296931215|gb|ADH92023.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Arcanobacterium haemolyticum DSM 20595] Length = 419 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 12/102 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 L+ + L CV C C + CP + QA R+ R Sbjct: 1 MSLEYAKASLARMSLDSCVKCTICESQCPVIRSTDLFTGPKFVGPQAERF----RAGASV 56 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + L C CT SCP+G+ A+ A+ + ++ Sbjct: 57 DV--------SLDYCSGCGICTTSCPQGVKIAEINAQARAVM 90 >gi|255067131|ref|ZP_05318986.1| cytochrome c oxidase accessory protein CcoG [Neisseria sicca ATCC 29256] gi|255048727|gb|EET44191.1| cytochrome c oxidase accessory protein CcoG [Neisseria sicca ATCC 29256] Length = 392 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 5/89 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y R E +G R Sbjct: 229 FMTFFFAHVMREKVCLHMCP-YARFQSAMFDKDTLIISYDTE---RGEPRGARKKTANKE 284 Query: 222 F-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 285 DSGLGDCINCTMCVQVCPVGIDIRDGLQY 313 >gi|271500636|ref|YP_003333661.1| RnfABCDGE type electron transport complex subunit C [Dickeya dadantii Ech586] gi|270344191|gb|ACZ76956.1| electron transport complex, RnfABCDGE type, C subunit [Dickeya dadantii Ech586] Length = 759 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ +L Q W ++ + L+ C Sbjct: 378 CIRCSKCADACPA-----------GLLPQQLYWFSRGQEHEKAR-------QHHLFDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 420 CGACAYVCPSNIPLVQ 435 >gi|290509259|ref|ZP_06548630.1| electron transport complex protein RnfC [Klebsiella sp. 1_1_55] gi|289778653|gb|EFD86650.1| electron transport complex protein RnfC [Klebsiella sp. 1_1_55] Length = 551 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + I+ I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEISAIRQE 449 >gi|290962240|ref|YP_003493422.1| oxidoreductase [Streptomyces scabiei 87.22] gi|260651766|emb|CBG74892.1| putative oxidoreductase [Streptomyces scabiei 87.22] Length = 964 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 7/92 (7%) Query: 156 QSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 H++ + CV C + CPSY + + + ++ Sbjct: 542 FPHDEDGFAGAVRRCVGVGRCRSDAGGVMCPSYRATGEENASTRGRARLLQEMVRGGTVQ 601 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C+ CP G++ Sbjct: 602 DGWRSTEVRDA--LDLCLSCKACSSDCPVGVD 631 >gi|229815898|ref|ZP_04446222.1| hypothetical protein COLINT_02954 [Collinsella intestinalis DSM 13280] gi|229808593|gb|EEP44371.1| hypothetical protein COLINT_02954 [Collinsella intestinalis DSM 13280] Length = 447 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 27/92 (29%), Gaps = 18/92 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + C+ C C +CP L P L A R S D Sbjct: 355 DAAVLPDETACIRCGRCVRACPLA-------LEPFALDSASR----SHDV-------VAL 396 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + C +C CP +I + K Sbjct: 397 DELAVMNCMECGSCAYVCPAHRRITASIREGK 428 >gi|206575962|ref|YP_002238213.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella pneumoniae 342] gi|226735447|sp|B5XWP9|RNFC_KLEP3 RecName: Full=Electron transport complex protein rnfC; AltName: Full=Nitrogen fixation protein rnfC gi|206565020|gb|ACI06796.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella pneumoniae 342] Length = 753 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + I+ I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEISAIRQE 449 >gi|148658268|ref|YP_001278473.1| hypothetical protein RoseRS_4179 [Roseiflexus sp. RS-1] gi|148570378|gb|ABQ92523.1| protein of unknown function DUF224, cysteine-rich region domain protein [Roseiflexus sp. RS-1] Length = 515 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L+ + + + L C+ C C +C Y D L P R + +G+ Sbjct: 12 LRKNITAEDVVNLEACLNCKMCGEACAWYLVTGDEKLHPTHKTGFIRQIYQRYMTVEGQV 71 Query: 215 -----------LDNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L++ R + C CT +CP G++ + + + D + Sbjct: 72 GGALGLVPTPTVADLQENMRYFWACTACGRCTLACPTGISIRRIVRLARAAYSDSGL 128 >gi|256824288|ref|YP_003148248.1| (4Fe-4S) cluster-containing protein [Kytococcus sedentarius DSM 20547] gi|256687681|gb|ACV05483.1| (4Fe-4S) cluster-containing protein [Kytococcus sedentarius DSM 20547] Length = 493 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 5/94 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C+ C CP Y G L E +L L Sbjct: 323 RQALRCIRCSACLNVCPVYERTGGHAYGSVYPGPIGAVLNPLLRGVSSEVDASLPYASSL 382 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +CP ++ + + + ++ Sbjct: 383 -----CGACFDACPVRIDIPTLLVEGRERSVEAG 411 >gi|225012907|ref|ZP_03703340.1| FAD linked oxidase domain protein [Flavobacteria bacterium MS024-2A] gi|225003029|gb|EEG41006.1| FAD linked oxidase domain protein [Flavobacteria bacterium MS024-2A] Length = 679 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 28/107 (26%), Gaps = 8/107 (7%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS------CPSYWWNSDRYLGPAILL 197 K D+ + +C C + CPS+ D Sbjct: 245 YNSETPIHKTQFDFSADQGLLRAAEKCNGAGKCRSVALSGTMCPSFRATRDEKHNTRGRA 304 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R ++ + + D+ C + C CP ++ A Sbjct: 305 NVLREVL--MENKKPNAFDSEVLKEVFDLCLSCKACATECPSSVDIA 349 >gi|304313913|ref|YP_003849060.1| formate dehydrogenase, alpha chain [Methanothermobacter marburgensis str. Marburg] gi|302587372|gb|ADL57747.1| predicted formate dehydrogenase, alpha chain [Methanothermobacter marburgensis str. Marburg] Length = 887 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 36/210 (17%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNID-GTNTLACVKDMKDIK 108 +++ M + P L R G C C + + G AC +D Sbjct: 13 EVEAARGMTVLEAALANGIYIPNLCFREGIEPFGGCRLCLVENNEGRLVTACETPAEDGS 72 Query: 109 GAI-----------AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ- 156 I L +D + + + + + +L + + Sbjct: 73 EFISESERINRIRRTTLSLIIADHSRDCLACPASGDCRLQELSSYLNVSDGDLERLRPEL 132 Query: 157 -----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + +C++C C C R LG + AYR Sbjct: 133 SGIDVDESNPFFLRNHDKCILCGICVRVC--------RGLGAEAVDFAYR--------GH 176 Query: 212 GERLDNLEDPFRLYR-CHTIMNCTQSCPKG 240 R+ D L C + C ++CP G Sbjct: 177 DTRIATFMDRDILDSSCVSCGECVEACPVG 206 >gi|288935201|ref|YP_003439260.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella variicola At-22] gi|288889910|gb|ADC58228.1| electron transport complex, RnfABCDGE type, C subunit [Klebsiella variicola At-22] Length = 719 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ L Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C C CP + + I+ I+ Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEISAIRQE 449 >gi|197117833|ref|YP_002138260.1| iron-sulfur cluster-binding oxidoreductase benzoyl-CoA reductase electron transfer protein [Geobacter bemidjiensis Bem] gi|197087193|gb|ACH38464.1| iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein [Geobacter bemidjiensis Bem] Length = 383 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 15/87 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C + CP WN R +++ + L +E ++R Sbjct: 22 LKYCYQCGLCDSVCP---WNRVRQFSMRKVVRQGVFG-----------LTEIEQEE-IWR 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C T C CP+G+N +A ++ M Sbjct: 67 CSTCGTCPSRCPRGVNQIEAGIALRTM 93 >gi|320353467|ref|YP_004194806.1| methyl-viologen-reducing hydrogenase subunit delta [Desulfobulbus propionicus DSM 2032] gi|320121969|gb|ADW17515.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfobulbus propionicus DSM 2032] Length = 535 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 12/101 (11%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 Q + ++ C C C+++CP + P + A +I G Sbjct: 152 CKQELQQLVATYDIHACQDCGKCTSACPL--ALIGKSFSPRAIASA---VITGGIHAPGV 206 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R + C T C + CP +N I +++ + Sbjct: 207 R-------ENAWSCLTCGLCYERCPSAVNFPAFIKELRHLY 240 >gi|238916865|ref|YP_002930382.1| electron transport complex protein RnfC [Eubacterium eligens ATCC 27750] gi|238872225|gb|ACR71935.1| electron transport complex protein RnfC [Eubacterium eligens ATCC 27750] Length = 439 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D C+ C C +CP + L PA L DE + Sbjct: 351 LVFQKDIVSKTTSSACIRCGKCGEACPEH-------LLPAKLAGFASRN----DEEGFTK 399 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D +E C +C+ CP + I ++ +L + Sbjct: 400 FDGME-------CVMCGSCSYVCPAKRPLTQQIKAMRSTVLANR 436 >gi|258406380|ref|YP_003199122.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] gi|257798607|gb|ACV69544.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] Length = 807 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWLI 204 K + CV C CS CP + + + AI A R + Sbjct: 230 TKHEGNFRARLSSAAQPVDPAACVACGACSAVCPEFGHSGFNEGLFARKAIDKDAPRAVP 289 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D+ L+D C C + CP G Sbjct: 290 DA--------YTILDDV-----CTRCGACEEVCPAG 312 >gi|187928201|ref|YP_001898688.1| cytochrome c oxidase accessory protein CcoG [Ralstonia pickettii 12J] gi|187725091|gb|ACD26256.1| cytochrome c oxidase accessory protein CcoG [Ralstonia pickettii 12J] Length = 487 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +E W ++ P +L G + C CP Y + P + Sbjct: 194 METWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCP-YARFQSVMVDPDTYVV 249 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNP 243 Y L R E +G R N + + L C C Q CP G++ Sbjct: 250 TYDTL---RGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDI 292 >gi|147921085|ref|YP_685105.1| aldo/keto reductase ferredoxin subunit [uncultured methanogenic archaeon RC-I] gi|110620501|emb|CAJ35779.1| putative aldo/keto reductase (2[4Fe-4S] ferredoxin-domain protein) [uncultured methanogenic archaeon RC-I] Length = 374 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 69/227 (30%), Gaps = 19/227 (8%) Query: 37 PDNKGNPCMDTYYVDLDNCGP-MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGT 95 P + +DT+ +D M L Y+ ++ R + G M Sbjct: 148 PGFSFHGELDTFKSVVDGYDWTMTLIQYNYLDEQLQAGTEGLRYAAKKNLGVAVMEPLRG 207 Query: 96 NTLACVKDMKDIKGAI------------AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 +A + A V+ P ++V+ + MS RS L Sbjct: 208 GAMALKTPAAEPLWAEAGKGTPAEWGLRWVWDHPEVTVVLSGMSRMSQLKQNLRSARKGL 267 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + ++ D + C C C CP+ + + ++ Sbjct: 268 PSSLTAKERSAIEKVRDLLQAQMKVNCTGCRYCMP-CPNGVAIPECFSF-----YNSAFM 321 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 D + + L D +C C + CP+G+ + + ++ Sbjct: 322 FDKPRKAKKSYEFFLGDTEYASKCTGCGECVEKCPQGVAVPEKMKEV 368 >gi|194425849|ref|ZP_03058405.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli B171] gi|194415904|gb|EDX32170.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli B171] Length = 740 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATA---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|310767587|gb|ADP12537.1| Electron transport complex protein rnfC [Erwinia sp. Ejp617] Length = 785 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ A+L Q W D + + C Sbjct: 376 NCIRCSACADACPA-----------ALLPQQLYWFSRGGDHEKAR-------AHNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|284926768|gb|ADC29120.1| putative NADH dehydrogenase I chain G [Campylobacter jejuni subsp. jejuni IA3902] Length = 820 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 65/256 (25%), Gaps = 71/256 (27%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREG-ICGSCGMNIDGTNTLACVK 102 T ++ NC + +L I + D P + C C C + DG +C Sbjct: 2 TVKINGINCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNT 61 Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWL 143 K+ M V DL ++ + + Sbjct: 62 KAKE-----------GMVVESDLKNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFT 110 Query: 144 KTVSPKPAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 K ++ K G+ C++C C T C S P Sbjct: 111 HKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-- 168 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG-- 240 DS D E + D + ++ C CT CP G Sbjct: 169 ------DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGAL 220 Query: 241 ----LNPAKAIAKIKM 252 I ++K Sbjct: 221 IGSKFQYTSNIWELKR 236 >gi|283478477|emb|CAY74393.1| Electron transport complex protein rnfC [Erwinia pyrifoliae DSM 12163] Length = 659 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ A+L Q W D + + C Sbjct: 376 NCIRCSACADACPA-----------ALLPQQLYWFSRGGDHEKAR-------AHNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|259908517|ref|YP_002648873.1| Electron transport complex protein [Erwinia pyrifoliae Ep1/96] gi|224964139|emb|CAX55646.1| Electron transport complex protein [Erwinia pyrifoliae Ep1/96] Length = 595 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ A+L Q W D + + C Sbjct: 376 NCIRCSACADACPA-----------ALLPQQLYWFSRGGDHEKAR-------AHNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|76801377|ref|YP_326385.1| D-lactate dehydrogenase / iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] gi|76557242|emb|CAI48817.1| probable D-lactate dehydrogenase/ iron-sulfur protein (probable glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] Length = 1011 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 28/107 (26%), Gaps = 10/107 (9%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQA 199 + L+ D C C C CP+Y + A Sbjct: 584 DPGFEPALRWDNDNGFQGMAELCHGCGGCRGPQETTGGVMCPTYRAADEEIQSTRGRANA 643 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R R + + + L C C+ CP ++ AK Sbjct: 644 LRAAASGRLDAAATDPEFMR--EVLDLCIGCKGCSNDCPSEVDLAKL 688 >gi|284801462|ref|YP_003413327.1| hypothetical protein LM5578_1215 [Listeria monocytogenes 08-5578] gi|284994604|ref|YP_003416372.1| hypothetical protein LM5923_1168 [Listeria monocytogenes 08-5923] gi|284057024|gb|ADB67965.1| hypothetical protein LM5578_1215 [Listeria monocytogenes 08-5578] gi|284060071|gb|ADB71010.1| hypothetical protein LM5923_1168 [Listeria monocytogenes 08-5923] Length = 451 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|227535963|ref|ZP_03966012.1| NADH dehydrogenase (quinone) [Sphingobacterium spiritivorum ATCC 33300] gi|300771669|ref|ZP_07081544.1| NADH-quinone oxidoreductase subunit I [Sphingobacterium spiritivorum ATCC 33861] gi|227244206|gb|EEI94221.1| NADH dehydrogenase (quinone) [Sphingobacterium spiritivorum ATCC 33300] gi|300761658|gb|EFK58479.1| NADH-quinone oxidoreductase subunit I [Sphingobacterium spiritivorum ATCC 33861] Length = 174 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L + + HF+ + +++ +K H ++ G C C C+ SC Sbjct: 27 IAKGLAITLRHFFKKIPTVKY--PEQIRPYSKNFRGQHSLKRDEQGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E+ + + L RC C ++CPK Sbjct: 85 PAEAITMTAAERQKGEENLYR----------EEKYAAVYEINML-RCIFCGLCEEACPKE 133 >gi|15606743|ref|NP_214123.1| oxido/reductase iron sulfur protein [Aquifex aeolicus VF5] gi|2983963|gb|AAC07510.1| oxido/reductase iron sulfur protein [Aquifex aeolicus VF5] Length = 395 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 +CV C C + CP+Y + + L ++ E + + Sbjct: 13 AEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEVVAQWNE------ 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP + + + + + RK Sbjct: 67 CAMCRRCEWICPNDVQYKEIMVHARE--IQRK 96 >gi|283956945|ref|ZP_06374417.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283791446|gb|EFC30243.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 820 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 65/256 (25%), Gaps = 71/256 (27%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREG-ICGSCGMNIDGTNTLACVK 102 T ++ NC + +L I + D P + C C C + DG +C Sbjct: 2 TVKINGINCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNT 61 Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWL 143 K+ M V DL ++ + + Sbjct: 62 KAKE-----------GMVVESDLKNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFT 110 Query: 144 KTVSPKPAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 K ++ K G+ C++C C T C S P Sbjct: 111 HKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-- 168 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG-- 240 DS D E + D + ++ C CT CP G Sbjct: 169 ------DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGAL 220 Query: 241 ----LNPAKAIAKIKM 252 I ++K Sbjct: 221 IGSKFQYTSNIWELKR 236 >gi|302345507|ref|YP_003813860.1| putative iron-sulfur cluster-binding protein [Prevotella melaninogenica ATCC 25845] gi|302149717|gb|ADK95979.1| putative iron-sulfur cluster-binding protein [Prevotella melaninogenica ATCC 25845] Length = 460 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 18/125 (14%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD---R 189 + + R + +++ + E +C+ C C +CP Y + Sbjct: 271 FRKARPGGEMHVILVDNGRSDMIANKE----HWMTLKCIRCGACMNTCPVYRRSGGYSYS 326 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y P + L + + + C ++C CP + P I + Sbjct: 327 YFIPGPIGVNLGMLKNPKLHSGN-----------VSACSLCLSCDCVCPAKVTPGSQIYR 375 Query: 250 IKMML 254 + L Sbjct: 376 WRQSL 380 >gi|328948189|ref|YP_004365526.1| ferredoxin [Treponema succinifaciens DSM 2489] gi|328448513|gb|AEB14229.1| ferredoxin [Treponema succinifaciens DSM 2489] Length = 227 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 52/212 (24%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM--NIDGTNTL-ACVK 102 Y V + ++ Y + CR G CG+C I G N L C+ Sbjct: 15 KKYEVPAELTIMNAMEYAGYQLKRG-------CGCRNGFCGACATIYRIKGENQLQTCLA 67 Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 K ++ + + LP ++K + + Q ++ + + Sbjct: 68 CSKKVEDDMYIATLPFFPLVKQVYDLNTMKPEQAVMMQLYPE------------------ 109 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +Y CV C C+ +CP ++ Y D + L Sbjct: 110 ----IYSCVGCNACTRACPQ-----------SLNTMQYIAYAQRGDFAKCADLS------ 148 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C+ CP G++ + A++ L Sbjct: 149 --FDCVMCGCCSSRCPAGISHPQV-AELARRL 177 >gi|294670450|ref|ZP_06735332.1| hypothetical protein NEIELOOT_02169 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307914|gb|EFE49157.1| hypothetical protein NEIELOOT_02169 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 159 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTIRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|254898697|ref|ZP_05258621.1| hypothetical protein LmonJ_02740 [Listeria monocytogenes J0161] Length = 451 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|291485933|dbj|BAI87008.1| hypothetical protein BSNT_05148 [Bacillus subtilis subsp. natto BEST195] Length = 479 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ D+++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+++CP + + + K + ++++ Sbjct: 360 PYASSLCAACSEACPVKIPLHELLLKHRQNIVEK 393 >gi|157363153|ref|YP_001469920.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga lettingae TMO] gi|157313757|gb|ABV32856.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga lettingae TMO] Length = 437 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 23/84 (27%), Gaps = 18/84 (21%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP YL +R + L C Sbjct: 362 NCIRCTKCVVACPMGLQPYLLYL------------------LSNKRKYDEAVSEGLMSCI 403 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKM 252 C CP ++ +AI K Sbjct: 404 ECGACAYICPSKIDHVRAIKLAKK 427 >gi|16080457|ref|NP_391284.1| iron-sulfur oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] gi|221311355|ref|ZP_03593202.1| hypothetical protein Bsubs1_18461 [Bacillus subtilis subsp. subtilis str. 168] gi|221315682|ref|ZP_03597487.1| hypothetical protein BsubsN3_18377 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320597|ref|ZP_03601891.1| hypothetical protein BsubsJ_18340 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324882|ref|ZP_03606176.1| hypothetical protein BsubsS_18496 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312956|ref|YP_004205243.1| putative iron-sulfur oxidoreductase [Bacillus subtilis BSn5] gi|81555738|sp|O07021|LUTB_BACSU RecName: Full=Lactate utilization protein B gi|2635917|emb|CAB15409.1| putative iron-sulfur oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] gi|320019230|gb|ADV94216.1| putative iron-sulfur oxidoreductase [Bacillus subtilis BSn5] Length = 479 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA C CP Y Y GP + L+ D+++ Sbjct: 312 QCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAV--LSPLLGGYDDYKEL---------- 359 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+++CP + + + K + ++++ Sbjct: 360 PYASSLCAACSEACPVKIPLHELLLKHRQNIVEK 393 >gi|228474762|ref|ZP_04059493.1| formate dehydrogenase, alpha subunit [Staphylococcus hominis SK119] gi|228271425|gb|EEK12793.1| formate dehydrogenase, alpha subunit [Staphylococcus hominis SK119] Length = 983 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 56/205 (27%), Gaps = 29/205 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVK----- 102 VD L + ++ P++ S C +C + IDG AC Sbjct: 11 DVDYLVEPGTNLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKVERACSTVVDRP 70 Query: 103 --------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKE 153 +K + L + + + H +++ W + S + + Sbjct: 71 MSVNTQNKRVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLQEQSYEYKTK 130 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + +C++C C +C N + D Sbjct: 131 PYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETLSIDW--------------DREHPR 176 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 + + + P C + C CP Sbjct: 177 VIWDNDVPINESSCVSCGQCATVCP 201 >gi|194014250|ref|ZP_03052867.1| iron-sulfur cluster binding protein [Bacillus pumilus ATCC 7061] gi|194013276|gb|EDW22841.1| iron-sulfur cluster binding protein [Bacillus pumilus ATCC 7061] Length = 474 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L + Sbjct: 311 QCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVL--------SPLLGGYDDYQELPFAS 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT +CP + + + K + +++++ Sbjct: 363 SLCAACTDACPVKIPLHELLIKHRQVIVEK 392 >gi|118589442|ref|ZP_01546848.1| formate dehydrogenase alpha subunit [Stappia aggregata IAM 12614] gi|118438142|gb|EAV44777.1| formate dehydrogenase alpha subunit [Stappia aggregata IAM 12614] Length = 922 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 49/175 (28%), Gaps = 31/175 (17%) Query: 81 REGICGSCGMNIDGTNTLACVK--------------DMKDIKGAIAVYPLPHMSVIKDLV 126 +G C +C ++I+G LA + + L +D Sbjct: 45 SDGNCRACMVDIEGERVLAASCIRTPAEGMVVKTTSERATKAREMVFELLAADQPSRDHH 104 Query: 127 VDM-SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 D S F+ + +P + Q L C+ C C +C Sbjct: 105 PDPESDFWKWSDRVGVSTSRFAP--CAKPAQDISHPAIAVNLDACIACNLCERACREVQV 162 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D L DP L C C +CP G Sbjct: 163 ND--VIGMADRGSHTVPVFD------------LADPMGLSTCVACGECVSACPTG 203 >gi|91772867|ref|YP_565559.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanococcoides burtonii DSM 6242] gi|121686863|sp|Q12XL7|ACDA_METBU RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha; Short=ACDS complex subunit alpha; AltName: Full=ACDS complex carbon monoxide dehydrogenase; Short=ACDS CODH gi|91711882|gb|ABE51809.1| Acetyl-CoA decarbonylase/synthase complex alpha subunit 2 [Methanococcoides burtonii DSM 6242] Length = 802 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 19/100 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + CV C C +CP+ S+ + E + + L Sbjct: 403 DEELKELADSCVHCLKCEVACPNSLPISEAMTALS--------------EGDLSKFELLH 448 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D C C +CPK ++ I K ++ ++ Sbjct: 449 DK-----CIACGRCEYACPKDIDIVNVIEKSSQRVISEEV 483 >gi|147677026|ref|YP_001211241.1| hypothetical protein PTH_0691 [Pelotomaculum thermopropionicum SI] gi|146273123|dbj|BAF58872.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 443 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 12/108 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE------- 213 R L C C C+ +C SY D PA+ R G Sbjct: 42 RTVRVMLETCTRCGACAAACHSYLGTGDSCNIPALRADLLRNFYHRHFTLTGRLASWLTG 101 Query: 214 RLDNLEDPFRLY-----RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R ++ + + +C+ C CP G++ A+ + ++ +L Sbjct: 102 RRTDVNEEIERWIDYSYQCNLCRRCAYYCPFGVDTAEIVMAMRYILAR 149 >gi|118442918|ref|YP_877660.1| rnfC/nqrF [Clostridium novyi NT] gi|118133374|gb|ABK60418.1| rnfC/nqrF [Clostridium novyi NT] Length = 439 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ C C +CP +L P+ +DS + Sbjct: 355 EKQAVLPEESSCIRCGRCVEACPM-------FLIPSK--------LDSLGRRNE--YEEF 397 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E L C +CT CP + ++I K +L K Sbjct: 398 EGNNGL-DCIECGSCTFVCPAKRHLIQSIRTSKRTVLSNK 436 >gi|47094983|ref|ZP_00232596.1| PduS protein [Listeria monocytogenes str. 1/2a F6854] gi|258612133|ref|ZP_05267836.2| PduS protein [Listeria monocytogenes F6900] gi|293596510|ref|ZP_05261826.2| PduS protein [Listeria monocytogenes J2818] gi|47016601|gb|EAL07521.1| PduS protein [Listeria monocytogenes str. 1/2a F6854] gi|258608728|gb|EEW21336.1| PduS protein [Listeria monocytogenes F6900] gi|293589768|gb|EFF98102.1| PduS protein [Listeria monocytogenes J2818] Length = 454 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|254993051|ref|ZP_05275241.1| PduS protein [Listeria monocytogenes FSL J2-064] Length = 451 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|183222747|ref|YP_001840743.1| NADH-quinone oxidoreductase chain I [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912779|ref|YP_001964334.1| NADH dehydrogenase subunit I [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226737397|sp|B0SHV5|NUOI_LEPBA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737398|sp|B0SRH5|NUOI_LEPBP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|167777455|gb|ABZ95756.1| NADH dehydrogenase (ubiquinone), I chain [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781169|gb|ABZ99467.1| NADH-quinone oxidoreductase chain I [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 175 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 13/109 (11%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F+++ +IE + + H ++ G C C CC CP+ + + Sbjct: 42 FFNKQVTIEY--PDKKRQYSTRFRGMHSMKRDEQGRERCTACFCCMWICPANAIHIE--- 96 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A + A R + D++ + L RC C ++CPKG Sbjct: 97 --AAEVTAERQHLHPEDKYAKKF------EINLLRCIFCGLCEEACPKG 137 >gi|72163243|ref|YP_290900.1| oxidoreductase [Thermobifida fusca YX] gi|71916975|gb|AAZ56877.1| putative oxidoreductase [Thermobifida fusca YX] Length = 949 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 7/109 (6%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGL-YECVMCACCSTS----CPSYWWNSDRYLGPAI 195 P + +L+ EDR CV C CPSY + Sbjct: 510 DVRPLAMAAPVRPVLRLAEDRDDFARAVRRCVGVGKCRAHAGAMCPSYQVTREEKDSTRG 569 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + ++ G R + + L C + C + CP G++ A Sbjct: 570 RARVLGEMLAGEVVTAGWRSPEVREALEL--CLSCKACARECPVGVDVA 616 >gi|51244622|ref|YP_064506.1| electron transport complex protein [Desulfotalea psychrophila LSv54] gi|50875659|emb|CAG35499.1| probable electron transport complex protein [Desulfotalea psychrophila LSv54] Length = 438 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 20/99 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ED + C+ C C +CP + + R E + Sbjct: 355 LFLAEDEVDTNEPGPCIRCGWCLDACPMGLEPKEIGVFVEA----------GRAEDTAQ- 403 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAKIK 251 F ++ C +C CP + +AK+K Sbjct: 404 -------FGVFDCFECGSCAFVCPMKRPLVQFVRLAKMK 435 >gi|331001661|ref|ZP_08325184.1| hypothetical protein HMPREF0491_00046 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413382|gb|EGG92749.1| hypothetical protein HMPREF0491_00046 [Lachnospiraceae oral taxon 107 str. F0167] Length = 448 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 18/95 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + C+ C C CPS YL P ++++ L D D E+L+ +E Sbjct: 358 DEVEENPETPCIKCGRCIDVCPS-------YLVPVLMMEKA--LND--DTEGFEKLNGME 406 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C +C CP + ++ + Sbjct: 407 -------CVECGSCAYVCPAKRPLTQGFKYMRQAV 434 >gi|255281825|ref|ZP_05346380.1| PduS protein [Bryantella formatexigens DSM 14469] gi|255267498|gb|EET60703.1| PduS protein [Bryantella formatexigens DSM 14469] Length = 449 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 8/124 (6%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ + + + K C+ C C+ CP Y + ++ Sbjct: 222 KTTGNIMVLPKEHYLFKRAALPMETIKRQTRSACIQCRMCTDLCPRY-LIGHQMRPNLVM 280 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLL 255 +R DE E L D C + C +CP GL+P K +K L Sbjct: 281 RNLWREETAKDDE---EFLKMFGDAA---NCCSCGVCEMFACPMGLSPRKVNEYMKGELR 334 Query: 256 DRKI 259 R I Sbjct: 335 KRGI 338 >gi|241662805|ref|YP_002981165.1| cytochrome C oxidase accessory protein CcoG [Ralstonia pickettii 12D] gi|240864832|gb|ACS62493.1| cytochrome c oxidase accessory protein CcoG [Ralstonia pickettii 12D] Length = 487 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 +E W ++ P +L G + C CP Y + P + Sbjct: 194 METWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCP-YARFQSVMVDPDTYVV 249 Query: 199 AYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNP 243 Y L R E +G R N + + L C C Q CP G++ Sbjct: 250 TYDTL---RGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDI 292 >gi|126667559|ref|ZP_01738529.1| electron transport complex protein RnfC [Marinobacter sp. ELB17] gi|126627985|gb|EAZ98612.1| electron transport complex protein RnfC [Marinobacter sp. ELB17] Length = 636 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ +CP +L Q W + + + E L+ L+ C Sbjct: 368 PCIRCGQCAEACP-----------MELLPQQLFWHAKATEFDKAEHLN-------LFDCI 409 Query: 229 TIMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 410 ECGACSYVCPSSIPLVQ 426 >gi|871456|emb|CAA61208.1| putative alpha subunit of formate dehydrogenease [Methanothermobacter thermautotrophicus] Length = 887 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 36/210 (17%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNID-GTNTLACVKDMKDIK 108 +++ M + P L R G C C + + G AC +D Sbjct: 13 EVEAARGMTVLEAALANGIYIPNLCFREGIEPFGGCRLCLVENNEGRLVTACETPAEDGS 72 Query: 109 GAI-----------AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ- 156 I L +D + + + + + +L + + Sbjct: 73 EFISESERINRIRRTTLSLIIADHSRDCLACPASGDCRLQELSSYLNVSDGDLERLRPEL 132 Query: 157 -----SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + +C++C C C R LG + AYR Sbjct: 133 SGIDVDESNPFFLRNHDKCILCGICVRVC--------RGLGAEAVDFAYR--------GH 176 Query: 212 GERLDNLEDPFRLYR-CHTIMNCTQSCPKG 240 R+ D L C + C ++CP G Sbjct: 177 DTRIATFMDRDILDSSCVSCGECVEACPVG 206 >gi|329120014|ref|ZP_08248686.1| cytochrome c oxidase accessory protein CcoG [Neisseria bacilliformis ATCC BAA-1200] gi|327463927|gb|EGF10241.1| cytochrome c oxidase accessory protein CcoG [Neisseria bacilliformis ATCC BAA-1200] Length = 598 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFR 223 + C CP Y P L+ +Y R E +G R + Sbjct: 329 WLFAHQMREQVCKHMCP-YARFQSAMFDPDTLIISYDTE---RGEPRGARKKTVARGETD 384 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 385 LGDCINCTMCVQVCPVGIDIRDGLQY 410 >gi|320538845|ref|ZP_08038521.1| putative fused 4Fe-4S ferredoxin-type protein/conserved protein [Serratia symbiotica str. Tucson] gi|320031005|gb|EFW13008.1| putative fused 4Fe-4S ferredoxin-type protein/conserved protein [Serratia symbiotica str. Tucson] Length = 617 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 26/127 (20%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M V+ ++ + ++ ++P + Q E C+ C C Sbjct: 334 MVVMGGPLMGFTLPALNVPIVKISNCILAPSLNEMSPQVPEQA--------CIRCGLCVD 385 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y E R NL D C C CP Sbjct: 386 ACPAGLLPQQLYWFSRGK------------EHDKARNHNLSD------CIECGACAFVCP 427 Query: 239 KGLNPAK 245 + + Sbjct: 428 SNIPLVQ 434 >gi|314935784|ref|ZP_07843136.1| formate dehydrogenase, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|313656349|gb|EFS20089.1| formate dehydrogenase, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 983 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 56/205 (27%), Gaps = 29/205 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVK----- 102 VD L + ++ P++ S C +C + IDG AC Sbjct: 11 DVDYLVEPGTNLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKVERACSTVVDRP 70 Query: 103 --------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKE 153 +K + L + + + H +++ W + S + + Sbjct: 71 MSVNTQNKRVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLQEQSYEYKTK 130 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + +C++C C +C N + D Sbjct: 131 PYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETLSIDW--------------DREHPR 176 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 + + + P C + C CP Sbjct: 177 VIWDNDVPINESSCVSCGQCATVCP 201 >gi|309791183|ref|ZP_07685715.1| hypothetical protein OSCT_1666 [Oscillochloris trichoides DG6] gi|308226745|gb|EFO80441.1| hypothetical protein OSCT_1666 [Oscillochloris trichoides DG6] Length = 1019 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 Y C C C C ++ P R ++ R E+ +D Sbjct: 499 ADIAWYAYACSQCGYCVDECDQFYGRGWESQSPRGKWFWLREHMEGRAEWDQRMVDT--- 555 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C C L + K++ L+ ++ Sbjct: 556 ---FLSCTTCELCNLRCSANLPIEPSWLKLRGELIHKQ 590 >gi|261253563|ref|ZP_05946136.1| electron transport complex protein RnfC [Vibrio orientalis CIP 102891] gi|260936954|gb|EEX92943.1| electron transport complex protein RnfC [Vibrio orientalis CIP 102891] Length = 881 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 18/117 (15%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + ++ C+ C C+ +CP+ L P LL Sbjct: 350 SQVPITKTSNCILAPTRKEISPNQYEMACIRCGQCAEACPAS-------LLPQQLLWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E LD E + C C CP + + + K + RK Sbjct: 401 --------SKAEELDKCE-ELNIKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTRK 448 >gi|307594819|ref|YP_003901136.1| heterodisulfide reductase subunit C [Vulcanisaeta distributa DSM 14429] gi|307550020|gb|ADN50085.1| Heterodisulfide reductase subunit C [Vulcanisaeta distributa DSM 14429] Length = 101 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 19/100 (19%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 E + C C C+T CP + +++R + L Sbjct: 12 EELLRFEPTASLCYQCGTCTTVCPMSE-----------------FGLNTRLVMKLANLGV 54 Query: 218 LED--PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D ++ C C ++CP + I I+ ++ Sbjct: 55 INDWVRKVIWLCTGCGLCQENCPNEIRIPNVIRFIRSKVI 94 >gi|226223743|ref|YP_002757850.1| PduS protein [Listeria monocytogenes Clip81459] gi|254823604|ref|ZP_05228605.1| PduS protein [Listeria monocytogenes FSL J1-194] gi|254852986|ref|ZP_05242334.1| PduS protein [Listeria monocytogenes FSL R2-503] gi|300764288|ref|ZP_07074282.1| PduS protein [Listeria monocytogenes FSL N1-017] gi|225876205|emb|CAS04914.1| Putative PduS protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606329|gb|EEW18937.1| PduS protein [Listeria monocytogenes FSL R2-503] gi|293592827|gb|EFG00588.1| PduS protein [Listeria monocytogenes FSL J1-194] gi|300514940|gb|EFK41993.1| PduS protein [Listeria monocytogenes FSL N1-017] Length = 451 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|47091942|ref|ZP_00229736.1| PduS protein [Listeria monocytogenes str. 4b H7858] gi|254932978|ref|ZP_05266337.1| PduS protein [Listeria monocytogenes HPB2262] gi|47019658|gb|EAL10397.1| PduS protein [Listeria monocytogenes str. 4b H7858] gi|293584536|gb|EFF96568.1| PduS protein [Listeria monocytogenes HPB2262] gi|328475177|gb|EGF45958.1| PduS protein [Listeria monocytogenes 220] gi|332311528|gb|EGJ24623.1| PduS type ferredoxin [Listeria monocytogenes str. Scott A] Length = 451 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|332883536|gb|EGK03819.1| NADH-quinone oxidoreductase subunit I [Dysgonomonas mossii DSM 22836] Length = 177 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 18/135 (13%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VIK L++ + HF+ + +++ + + H + G C C C+ SC Sbjct: 31 VIKGLIITIKHFFKKKATVQY--PEQQREFSPVYRGQHVLMRDDQGRERCTACGLCALSC 88 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E E + RC C ++CPK Sbjct: 89 PAEAITMVAAERKKGEEHLYR-----------EEKYASEYEINMLRCIFCGICEEACPK- 136 Query: 241 LNPAKAIAKIKMMLL 255 +AI K LL Sbjct: 137 ----EAIFLTKSKLL 147 >gi|313624158|gb|EFR94226.1| PduS type ferredoxin, putative [Listeria innocua FSL J1-023] Length = 455 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 236 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 293 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 294 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 342 >gi|313609317|gb|EFR84954.1| PduS type ferredoxin, putative [Listeria monocytogenes FSL F2-208] Length = 427 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 208 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 265 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 266 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 314 >gi|307942955|ref|ZP_07658300.1| formate dehydrogenase, alpha subunit [Roseibium sp. TrichSKD4] gi|307773751|gb|EFO32967.1| formate dehydrogenase, alpha subunit [Roseibium sp. TrichSKD4] Length = 924 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 48/175 (27%), Gaps = 31/175 (17%) Query: 81 REGICGSCGMNIDGTNTLACVK--------------DMKDIKGAIAVYPLPHMSVIKDLV 126 +G C +C ++I+G TL + + + L +D Sbjct: 46 SDGNCRACMVDIEGERTLTASCVRAPSDGMVVNTASERAEKAREMVFELLMADQPSRDQH 105 Query: 127 VDM-SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 D S F+ I + Q L C+ C C +C Sbjct: 106 PDPESDFWKWSDEIGV--TESRYAACGKPAQDISHPAIAVNLDTCIACNLCERACREVQV 163 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D L DP L C C +CP G Sbjct: 164 ND--VIGMADRGSHTVPVFD------------LMDPMGLSSCVACGECVSACPTG 204 >gi|300313195|ref|YP_003777287.1| oxidoreductase [Herbaspirillum seropedicae SmR1] gi|300075980|gb|ADJ65379.1| oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 1333 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 863 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWEEFEDV 922 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 923 --ADHCTVCHKCVTPCPVDIDFGDVSMNMRNLL 953 >gi|291459153|ref|ZP_06598543.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418407|gb|EFE92126.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 324 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 24/91 (26%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C CS +C D E L L Y C Sbjct: 8 SKCIHCGKCSENCSFLKKYH-------------------LDIGDHEHLRALS-----YHC 43 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT+ CP G++ + I ++ ++R Sbjct: 44 FLCGECTRVCPIGIDGRQIILNMRKEEVERA 74 >gi|294636276|ref|ZP_06714681.1| pyruvate-ferredoxin oxidoreductase [Edwardsiella tarda ATCC 23685] gi|291090440|gb|EFE23001.1| pyruvate-ferredoxin oxidoreductase [Edwardsiella tarda ATCC 23685] Length = 639 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 9/90 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ D I C C C +CP + + + PA L A + SRD Sbjct: 134 WEKRNIADAIPIWQPTLCTQCNHCVAACP-HAAIRAKVVDPAALTDAPDTLASLEVRSRD 192 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + C C CP Sbjct: 193 MRGQRYVLQVAPED----CTGCNLCVTVCP 218 >gi|317051294|ref|YP_004112410.1| FAD linked oxidase domain-containing protein [Desulfurispirillum indicum S5] gi|316946378|gb|ADU65854.1| FAD linked oxidase domain protein [Desulfurispirillum indicum S5] Length = 967 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 11/109 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQ- 211 + E + G C + CP Y D P R LI D + Sbjct: 548 NQEYQEQIEMCHGCSTCTTVSKVVNMCPVYKVTRDEKAAPKAKANILRHLIQGNLDTRKF 607 Query: 212 ---GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E + L+ C + +C C ++ K + + K + R Sbjct: 608 PYSPEFKEILDQ------CISCQSCHLECVSNVDIPKLVLEAKARYVLR 650 >gi|110598344|ref|ZP_01386618.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] gi|110340042|gb|EAT58543.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] Length = 276 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 13/166 (7%) Query: 96 NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS--PKPAKE 153 N LA + ++ I + LP + + F +++ V K Sbjct: 88 NVLAAEAQLDPLQVVIIGFDLPKGELKSLQGSSVDDFTDLLGALKESTPDVDGRELLEKI 147 Query: 154 LLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 S E+R + +C+ C C +CP + + +W+ S Sbjct: 148 EKMSPEERFAFWQEEFSKCIKCYACRQACPMCYCRRC-----IVDSNQPQWVNTSSHTLG 202 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + RC NC ++CP + I + Sbjct: 203 NFEWNIVRAFHLSGRCVECGNCDRACPVNIPL----RLINRKMAQE 244 >gi|312172333|emb|CBX80590.1| Electron transport complex protein rnfC [Erwinia amylovora ATCC BAA-2158] Length = 710 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ A+L Q W D + Sbjct: 367 EMGQNAAEKNCIRCSACADACPA-----------ALLPQQLYWFSRGGDHDKAR------ 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP + + Sbjct: 410 -AHNIADCIECGACAYVCPSNIPLVQ 434 >gi|292488196|ref|YP_003531078.1| electron transport complex protein RnfC [Erwinia amylovora CFBP1430] gi|292899402|ref|YP_003538771.1| electron transport complex protein [Erwinia amylovora ATCC 49946] gi|291199250|emb|CBJ46367.1| electron transport complex protein [Erwinia amylovora ATCC 49946] gi|291553625|emb|CBA20670.1| Electron transport complex protein rnfC [Erwinia amylovora CFBP1430] Length = 750 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ A+L Q W D + Sbjct: 367 EMGQNAAEKNCIRCSACADACPA-----------ALLPQQLYWFSRGGDHDKAR------ 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP + + Sbjct: 410 -AHNIADCIECGACAYVCPSNIPLVQ 434 >gi|149204187|ref|ZP_01881155.1| formate dehydrogenase, alpha subunit [Roseovarius sp. TM1035] gi|149142629|gb|EDM30674.1| formate dehydrogenase, alpha subunit [Roseovarius sp. TM1035] Length = 924 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 44/175 (25%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTL-ACVKDMKDIKGAIAV-----YPLPHMSVIKDLVVDMSHFYSQ 135 +G C +C + + G TL A + M V L S Sbjct: 47 DGNCRACMVEVQGERTLVASCIREAKAGMVVTTNSARAESARKMVVEMLLADQPEQAQSH 106 Query: 136 HRSIEPWLKTVSPKPAKELLQSHE----------DRQKIDGLYECVMCACCSTSCPSYWW 185 RS W + E L C+ C C +C Sbjct: 107 DRSSHLWDMAEANGVTHSRFPKLERDRIPLLDDSHIAMRVNLDACIQCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D L DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPVFD------------LADPMGDSTCVACGECVQACPTG 207 >gi|153952112|ref|YP_001398748.1| hypothetical protein JJD26997_1794 [Campylobacter jejuni subsp. doylei 269.97] gi|152939558|gb|ABS44299.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 357 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E C Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYVYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDTC 58 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ + + PL IKDL++D + F +++ +E + Sbjct: 59 ----IVVNKQIIPLFTPLEKIAKEFDFNLFIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|304379496|ref|ZP_07362231.1| NAD-dependent formate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304342028|gb|EFM07932.1| NAD-dependent formate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140151|gb|EFW32010.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320143421|gb|EFW35202.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus MRSA177] Length = 1012 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 62/229 (27%), Gaps = 40/229 (17%) Query: 31 RIYRWNPDNKGNPCMDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREG 83 +IY G M + V D L + ++ P++ S Sbjct: 20 KIY-----IDGVSNMQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQ 74 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMS 130 C +C + IDG +C + V L + + + Sbjct: 75 TCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNN 134 Query: 131 HFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 H +++ W + + + ++ + +C++C C +C N Sbjct: 135 GDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETI 194 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D + + + P C + C CP Sbjct: 195 RIDW--------------DREHPRVIWDNDVPINESSCVSCGQCATVCP 229 >gi|296126764|ref|YP_003634016.1| electron transport complex, RnfABCDGE type, C subunit [Brachyspira murdochii DSM 12563] gi|296018580|gb|ADG71817.1| electron transport complex, RnfABCDGE type, C subunit [Brachyspira murdochii DSM 12563] Length = 435 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 19/103 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D+ + Y C+ C C +CP ++ + + + + Sbjct: 352 LFLDKDKMPKEVEYPCIKCGRCGNACPLRLSPTE--------------IAHT---AKAKI 394 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D L D + C +C+ CP + + I + LL R Sbjct: 395 KDKLNDLD-IATCFECGSCSYICPSKIPLVQWI-RFGKDLLRR 435 >gi|116872516|ref|YP_849297.1| pduS type ferredoxin, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741394|emb|CAK20518.1| pduS type ferredoxin, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 454 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +L ++ + C+ C+ CS CP D + P +++ + Sbjct: 234 TEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAE 291 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D D + C C +CP GL+P + +K LL + + Sbjct: 292 DITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|303230582|ref|ZP_07317335.1| iron-sulfur cluster-binding protein [Veillonella atypica ACS-049-V-Sch6] gi|302514775|gb|EFL56764.1| iron-sulfur cluster-binding protein [Veillonella atypica ACS-049-V-Sch6] Length = 481 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 17/98 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + + D Sbjct: 306 FQEMLRCIRCGACMNICPVYRHISGHGYGSVYPGPMGAVLTPLF----------KGYDVA 355 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y CT++CP + + + + + ++ D Sbjct: 356 GDLP--YASTLCGACTENCPVAIPLHELLMEHRHIMAD 391 >gi|253729977|ref|ZP_04864142.1| formate dehydrogenase family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|297209875|ref|ZP_06926271.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910887|ref|ZP_07128337.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus TCH70] gi|253726424|gb|EES95153.1| formate dehydrogenase family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|296885548|gb|EFH24485.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887867|gb|EFK83062.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus TCH70] Length = 1012 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 62/229 (27%), Gaps = 40/229 (17%) Query: 31 RIYRWNPDNKGNPCMDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREG 83 +IY G M + V D L + ++ P++ S Sbjct: 20 KIY-----IDGVSNMQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQ 74 Query: 84 ICGSCGMNIDGTNTLACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMS 130 C +C + IDG +C + V L + + + Sbjct: 75 TCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNN 134 Query: 131 HFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 H +++ W + + + ++ + +C++C C +C N Sbjct: 135 GDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETI 194 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D + + + P C + C CP Sbjct: 195 RIDW--------------DREHPRVIWDNDVPINESSCVSCGQCATVCP 229 >gi|242371958|ref|ZP_04817532.1| formate dehydrogenase, alpha subunit [Staphylococcus epidermidis M23864:W1] gi|242350337|gb|EES41938.1| formate dehydrogenase, alpha subunit [Staphylococcus epidermidis M23864:W1] Length = 989 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 34/217 (15%) Query: 42 NPCMDTYYVDLDNCGPMV-----LDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGT 95 P + V LD +V L + ++ P + S C +C + IDG Sbjct: 4 KPMQEHLVVTLDGTDYLVEPGTNLLEFIRSRDTFVPAICYNESMGPIQTCDTCMVEIDGE 63 Query: 96 NTLACVKDMKDI-------------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 AC + + L + + + H +++ W Sbjct: 64 IARACGTTIDRPMNVKTNNDDVQSSQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDEW 123 Query: 143 -LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ + + ++ + +C++C C +C N + Sbjct: 124 GVQHQTYEYKEKPYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETISIDW-------- 175 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 176 ------DREHPRVIWDNDVPINESSCVSCGQCATVCP 206 >gi|219854503|ref|YP_002471625.1| hypothetical protein CKR_1160 [Clostridium kluyveri NBRC 12016] gi|219568227|dbj|BAH06211.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 458 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 27/99 (27%), Gaps = 17/99 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E C+ C C +CP + L YR Sbjct: 356 LSLSESDANTGTETACIRCGRCFNACPM--SLNPSMLSILGQNNLYR------------- 400 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ + L C +C CP N + + +K Sbjct: 401 --EAKEDYNLLDCVECGSCVYVCPAKRNIVQYVKYLKAE 437 >gi|328466674|gb|EGF37805.1| PduS protein [Listeria monocytogenes 1816] Length = 423 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 204 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 261 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 262 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 310 >gi|323476328|gb|ADX81566.1| iron-sulfur protein, putative [Sulfolobus islandicus HVE10/4] Length = 750 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y + P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNSIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RL--LTGETNFEFCFGCASCQEACPVGINISNLMETL 375 >gi|323473677|gb|ADX84283.1| iron-sulfur protein, putative [Sulfolobus islandicus REY15A] Length = 750 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y + P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNSIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RL--LTGETNFEFCFGCASCQEACPVGINISNLMETL 375 >gi|229578009|ref|YP_002836407.1| iron-sulfur protein, [Sulfolobus islandicus Y.G.57.14] gi|228008723|gb|ACP44485.1| iron-sulfur protein, putative [Sulfolobus islandicus Y.G.57.14] Length = 750 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y + P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNSIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RL--LTGETNFEFCFGCASCQEACPVGINISNLMETL 375 >gi|229583221|ref|YP_002841620.1| iron-sulfur protein, putative [Sulfolobus islandicus Y.N.15.51] gi|228013937|gb|ACP49698.1| iron-sulfur protein, putative [Sulfolobus islandicus Y.N.15.51] Length = 750 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y + P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNSIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RL--LTGETNFEFCFGCASCQEACPVGINISNLMETL 375 >gi|153953889|ref|YP_001394654.1| hypothetical protein CKL_1264 [Clostridium kluyveri DSM 555] gi|146346770|gb|EDK33306.1| RnfC [Clostridium kluyveri DSM 555] Length = 452 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 27/99 (27%), Gaps = 17/99 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E C+ C C +CP + L YR Sbjct: 350 LSLSESDANTGTETACIRCGRCFNACPM--SLNPSMLSILGQNNLYR------------- 394 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 ++ + L C +C CP N + + +K Sbjct: 395 --EAKEDYNLLDCVECGSCVYVCPAKRNIVQYVKYLKAE 431 >gi|146303327|ref|YP_001190643.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701577|gb|ABP94719.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 610 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 22/105 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L D D C++C C + CP D+ P Sbjct: 269 LDPFSDENSQDLFSGCILCGKCVSVCPHVAQRGDKDYSPLGFF----------------- 311 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + + CH C CP L+ K++ R + Sbjct: 312 VSGMSKEYA--NCHLCGRCDDVCPVSLDIVP---KLREKATFRNV 351 >gi|107103021|ref|ZP_01366939.1| hypothetical protein PaerPA_01004090 [Pseudomonas aeruginosa PACS2] Length = 774 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + E L Sbjct: 359 ELPEPVPAMPCIRCGDCAQVCPVSLLPQQLHFFALG----------------DEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKA 445 >gi|15598687|ref|NP_252181.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PAO1] gi|17369004|sp|Q9HYB8|RNFC_PSEAE RecName: Full=Electron transport complex protein rnfC gi|9949637|gb|AAG06879.1|AE004770_4 probable ferredoxin [Pseudomonas aeruginosa PAO1] Length = 774 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + E L Sbjct: 359 ELPEPVPAMPCIRCGDCAQVCPVSLLPQQLHFFALG----------------DEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKA 445 >gi|254242172|ref|ZP_04935494.1| hypothetical protein PA2G_02903 [Pseudomonas aeruginosa 2192] gi|126195550|gb|EAZ59613.1| hypothetical protein PA2G_02903 [Pseudomonas aeruginosa 2192] Length = 774 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + E L Sbjct: 359 ELPEPVPAMPCIRCGDCAQVCPVSLLPQQLHFFALG----------------DEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKA 445 >gi|224369306|ref|YP_002603470.1| FdhB5 [Desulfobacterium autotrophicum HRM2] gi|223692023|gb|ACN15306.1| FdhB5 [Desulfobacterium autotrophicum HRM2] Length = 315 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 5/89 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C +CP + + + +W+ +D L Sbjct: 197 HFETLLDGCIRCYACRNACPLCYCPTC-----FVDESNPQWVGKGQDPSDVRTFHFLRAY 251 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 RC C ++CP + K+ Sbjct: 252 HCAGRCTDCGACEEACPMDIRVRDFTRKL 280 >gi|153004305|ref|YP_001378630.1| FAD linked oxidase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027878|gb|ABS25646.1| FAD linked oxidase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 967 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 31/88 (35%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ C C CPS + + + R + + D +RL+ + Sbjct: 544 HPIIDRCIECGFCEPRCPSRDLTTTPRQRIVVQRELARLRVTAEDPDLLQRLEADYEYMG 603 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C +CP G++ ++ Sbjct: 604 DQTCATDGLCATACPVGIDTGAHTKWLR 631 >gi|323701729|ref|ZP_08113400.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323533265|gb|EGB23133.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 467 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 25/91 (27%), Gaps = 16/91 (17%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP + + DSR + D RC Sbjct: 128 TVCIECGKCAKACPYHAIIEITRPCERACALKAVKIDDSR--------KAVIDSD---RC 176 Query: 228 HTIMNCTQSCPKGL-----NPAKAIAKIKMM 253 + C CP G I ++ Sbjct: 177 VSCGMCVTVCPFGAITDTSQMMDVIHSLRRK 207 >gi|320106291|ref|YP_004181881.1| D-lactate dehydrogenase (cytochrome) [Terriglobus saanensis SP1PR4] gi|319924812|gb|ADV81887.1| D-lactate dehydrogenase (cytochrome) [Terriglobus saanensis SP1PR4] Length = 1029 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 46/210 (21%), Gaps = 23/210 (10%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 D D LD + + +L+ + A + Sbjct: 467 FDLVTEDGIRKFRAFLDRATDLVVQHGGSLSGEHGDGQARGALLERMFGSEIMQAFEEFK 526 Query: 105 KDIKGAIAVYP---LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 + + P + DL + S + Sbjct: 527 ELWDPDWKMNPGKLVRARQPHADLRYGADF-------------SPSEPKHTHFHFISDGN 573 Query: 162 QKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 CV C T CPSY + A ++ + +D Sbjct: 574 SFSHATQRCVGVGKCRKDEGGTMCPSYMATKEERHSTRGRAHALFEMLQGEVIGKKGTVD 633 Query: 217 NLEDP--FRLYRCHTIMNCTQSCPKGLNPA 244 + L C + C CP ++ A Sbjct: 634 WNDHDVKETLDLCLSCKACKSECPVQVDIA 663 >gi|46907359|ref|YP_013748.1| PduS protein [Listeria monocytogenes serotype 4b str. F2365] gi|46880626|gb|AAT03925.1| PduS protein [Listeria monocytogenes serotype 4b str. F2365] Length = 454 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|302549323|ref|ZP_07301665.1| FAD binding oxidoreductase [Streptomyces viridochromogenes DSM 40736] gi|302466941|gb|EFL30034.1| FAD binding oxidoreductase [Streptomyces viridochromogenes DSM 40736] Length = 967 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 7/100 (7%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRW 202 P H++ + CV C + CPSY + + + Sbjct: 543 PLVDTSFTFPHDEDGLAGAVRRCVGIGRCRSDAGGVMCPSYRATGEENHSTRGRARLLQE 602 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 ++ G R + D L C + C+ CP G++ Sbjct: 603 MVRGETVQDGWRSTEVRDA--LDLCLSCKACSSDCPVGVD 640 >gi|261856372|ref|YP_003263655.1| electron transport complex, RnfABCDGE type, C subunit [Halothiobacillus neapolitanus c2] gi|261836841|gb|ACX96608.1| electron transport complex, RnfABCDGE type, C subunit [Halothiobacillus neapolitanus c2] Length = 567 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 18/89 (20%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +DR C+ C+ C+ +CP+ L P L R Q +R+ Sbjct: 365 RPQDRPAEPAPQPCIRCSLCAEACPA-------DLLPQQLYWYAR-------AKQFDRVV 410 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L+ C C+ CP L Sbjct: 411 ----EYHLFDCIECGVCSAVCPSHLPLVD 435 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 6/76 (7%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL------ID 205 DR L++C+ C CS CPS+ D Y + A Sbjct: 399 WYARAKQFDRVVEYHLFDCIECGVCSAVCPSHLPLVDYYRYAKTEVWAREREKSKASQAR 458 Query: 206 SRDEFQGERLDNLEDP 221 R EF+ ERL+ ++ Sbjct: 459 ERFEFRNERLERIKAE 474 >gi|224502562|ref|ZP_03670869.1| hypothetical protein LmonFR_08584 [Listeria monocytogenes FSL R2-561] gi|254830104|ref|ZP_05234759.1| hypothetical protein Lmon1_02045 [Listeria monocytogenes 10403S] Length = 451 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|218282321|ref|ZP_03488611.1| hypothetical protein EUBIFOR_01193 [Eubacterium biforme DSM 3989] gi|218216694|gb|EEC90232.1| hypothetical protein EUBIFOR_01193 [Eubacterium biforme DSM 3989] Length = 436 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 18/95 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D C+ C CS CPS L P + A + + DE Sbjct: 359 NDDAIACLRCGKCSDHCPS-------GLQPVRITAALK--ANDVDEMSKR---------G 400 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C CT CP ++ + + K K +++ +K Sbjct: 401 VMSCIECGMCTYICPSHIDVTENVRKAKRIVMLKK 435 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 4/38 (10%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKM----MLLDRKI 259 C C+ CP GL P + A +K + R + Sbjct: 364 ACLRCGKCSDHCPSGLQPVRITAALKANDVDEMSKRGV 401 >gi|258611525|ref|ZP_05233188.2| PduS protein [Listeria monocytogenes FSL N3-165] gi|258600897|gb|EEW14222.1| PduS protein [Listeria monocytogenes FSL N3-165] Length = 454 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|88859825|ref|ZP_01134464.1| electron transport complex protein RnfC [Pseudoalteromonas tunicata D2] gi|88817819|gb|EAR27635.1| electron transport complex protein RnfC [Pseudoalteromonas tunicata D2] Length = 872 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ ++L Q +W S++ + E L+ C Sbjct: 377 CIRCSACADACPA-----------SLLPQQLQWFAKSQEFDKLE-------QHNLFDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAFVCPSEIPLVQ 434 >gi|315453247|ref|YP_004073517.1| NADH dehydrogenase I chain G [Helicobacter felis ATCC 49179] gi|315132299|emb|CBY82927.1| NADH dehydrogenase I chain G [Helicobacter felis ATCC 49179] Length = 811 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 39/217 (17%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGA 110 ++ + P + C + C C + ++G AC K Sbjct: 11 VEFSEGQTILEAARSAGVYIPAICYLSGCSPTVACKMCMVEVEGKRVYACNTKPKANTKV 70 Query: 111 IAVYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 + P + V L V D S L P ++ L+ Sbjct: 71 ATMTPALVAERQMIMQTYDVNHPLECGVCDKSGECELQDMTHRTLVDRQPFSVRDNLKPF 130 Query: 159 EDRQK-IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + C+MC C T+C +S+ L+A + + + D+F+ Sbjct: 131 AFWAQASYDPNLCIMCERCVTTCSDNIGDSN--------LKASKASLHAPDKFKE---SM 179 Query: 218 LEDPFRLYR--------------CHTIMNCTQSCPKG 240 +DPF ++ C+ C CP G Sbjct: 180 PKDPFGVWSRKQKGMIAFVGSTPCYDCGECIAVCPVG 216 >gi|311694180|gb|ADP97053.1| electron transport complex, RnfABCDGE type, C subunit [marine bacterium HP15] Length = 580 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ +CP +L Q W + + + E L+ L+ C Sbjct: 339 PCIRCGQCAEACP-----------MELLPQQLFWHAKATEFEKAEHLN-------LFDCI 380 Query: 229 TIMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 381 ECGACSYVCPSSIPLVQ 397 >gi|290894304|ref|ZP_06557270.1| PduS protein [Listeria monocytogenes FSL J2-071] gi|290556123|gb|EFD89671.1| PduS protein [Listeria monocytogenes FSL J2-071] Length = 454 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|217964789|ref|YP_002350467.1| PduS protein [Listeria monocytogenes HCC23] gi|217334059|gb|ACK39853.1| PduS protein [Listeria monocytogenes HCC23] gi|307570650|emb|CAR83829.1| propanediol utilization protein (electron transport protein) [Listeria monocytogenes L99] Length = 451 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 232 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 289 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 290 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 338 >gi|161503451|ref|YP_001570563.1| electron transport complex protein RnfC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189043392|sp|A9MRW8|RNFC_SALAR RecName: Full=Electron transport complex protein rnfC gi|160864798|gb|ABX21421.1| hypothetical protein SARI_01525 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 673 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEETSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|269798707|ref|YP_003312607.1| iron-sulfur cluster binding protein [Veillonella parvula DSM 2008] gi|269095336|gb|ACZ25327.1| iron-sulfur cluster binding protein [Veillonella parvula DSM 2008] Length = 481 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 17/98 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + + D Sbjct: 306 FQEMLRCIRCGACMNICPVYRHVSGHGYGSVYPGPMGAVLTPLF----------KGYDVA 355 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y CT++CP + + + + + ++ D Sbjct: 356 GDLP--YASTLCGACTENCPVAIPLHELLMEHRHIMAD 391 >gi|157692450|ref|YP_001486912.1| iron-sulfur cluster-binding protein [Bacillus pumilus SAFR-032] gi|259495062|sp|A8FDN5|LUTB_BACP2 RecName: Full=Lactate utilization protein B gi|157681208|gb|ABV62352.1| iron-sulfur cluster-binding protein [Bacillus pumilus SAFR-032] Length = 473 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRC 227 +C+ CA C CP Y G L L +D L + Sbjct: 311 QCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVL--------SPLLGGYDDYQELPFAS 362 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT +CP + + + K + +++++ Sbjct: 363 SLCAACTDACPVKIPLHELLIKHRQVIVEK 392 >gi|78355359|ref|YP_386808.1| oxidoreductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217764|gb|ABB37113.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1188 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----SRDEFQGERLDNLEDPFRL- 224 C C C CP ++ D P + LI+ S+ + RL Sbjct: 728 CTRCGKCKNVCPMFYPERDLQHHPRNKNISLGALIEAIYYSQVNKGKPDSSLMASLNRLM 787 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CT CP +N + ++ + + Sbjct: 788 EHCTGCGKCTAVCPVKINSSDVALHLRSFVEEE 820 >gi|85703437|ref|ZP_01034541.1| formate dehydrogenase, alpha subunit [Roseovarius sp. 217] gi|85672365|gb|EAQ27222.1| formate dehydrogenase, alpha subunit [Roseovarius sp. 217] Length = 924 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 47/184 (25%), Gaps = 27/184 (14%) Query: 70 IDPTLTLRRSCREGIC-----------GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH 118 P R C SC + + + V L Sbjct: 38 HKPAPGYRPDGNCRACMVEVEGERTLVASCIREAKAGMVVTTNSSRAETARKMVVEMLLA 97 Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACC 176 +++ D S + ++ PK + + +D L C+ C C Sbjct: 98 DQPEREVSHDRSSHLWDMAAANGVSESRFPKVERSRIPLLDDSHIAMRVNLDACISCGLC 157 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 +C N +G A + D L DP C C Q+ Sbjct: 158 VRACREVQVND--VIGMAGRGHDAYPVFD------------LADPMGASTCVACGECVQA 203 Query: 237 CPKG 240 CP G Sbjct: 204 CPTG 207 >gi|260753388|ref|YP_003226281.1| hypothetical protein Za10_1153 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552751|gb|ACV75697.1| protein of unknown function DUF162 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 480 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 23/155 (14%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + V L ++ + SHF + + E + V ++ L Sbjct: 263 IPRLEDVPVFVRLLSRSALGSPITQYTSHFRAPRKGGEMHIILVDNGRSERLKNET---- 318 Query: 163 KIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +C+ C C +CP + Y GP L+ + + + RL Sbjct: 319 -FRHSLKCIRCGACMNTCPVFRRSGGLSYGATYAGPIGLIIDPTYNLH-----KYSRLP- 371 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +C CP +N + IA + Sbjct: 372 -------FSSTLNGSCANVCPVKINIHEQIASWRQ 399 >gi|239999835|ref|ZP_04719759.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae 35/02] gi|317165124|gb|ADV08665.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae TCDC-NG08107] Length = 159 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRCYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|154249084|ref|YP_001409909.1| electron transport complex, RnfABCDGE type, C subunit [Fervidobacterium nodosum Rt17-B1] gi|154153020|gb|ABS60252.1| electron transport complex, RnfABCDGE type, C subunit [Fervidobacterium nodosum Rt17-B1] Length = 435 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 28/90 (31%), Gaps = 18/90 (20%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C+ C CP LQ Y + SR + E Sbjct: 354 QKRESTNCIRCSYCVHVCPM-------------NLQPYLLDLLSRKKKYDEAAAI----- 395 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C +CT CP + K+I K Sbjct: 396 GLLDCIECGSCTYICPANVEHVKSIKLAKK 425 >gi|116051508|ref|YP_789656.1| electron transport complex protein RnfC [Pseudomonas aeruginosa UCBPP-PA14] gi|115586729|gb|ABJ12744.1| putative NADH:ubiquinone oxidoreductase, subunit RnfC [Pseudomonas aeruginosa UCBPP-PA14] Length = 774 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + E L Sbjct: 359 ELPEPVPAMPCIRCGDCARVCPVSLLPQQLHFFALG----------------DEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKA 445 >gi|333004461|gb|EGK23991.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri VA-6] Length = 1174 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 779 >gi|332760202|gb|EGJ90498.1| putative pyruvate-flavodoxin oxidoreductase domain protein [Shigella flexneri K-671] Length = 593 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 91 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 149 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 150 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 198 >gi|110805757|ref|YP_689277.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] gi|110615305|gb|ABF03972.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] Length = 1174 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 779 >gi|24113170|ref|NP_707680.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|30062869|ref|NP_837040.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|24052159|gb|AAN43387.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|30041117|gb|AAP16847.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|281601226|gb|ADA74210.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2002017] gi|313650586|gb|EFS14989.1| pyruvate:ferredoxin oxidoreductase [Shigella flexneri 2a str. 2457T] gi|332757689|gb|EGJ88020.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri 4343-70] gi|332767619|gb|EGJ97812.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri 2930-71] gi|333004774|gb|EGK24296.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri K-218] gi|333018639|gb|EGK37933.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri K-304] Length = 1174 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 779 >gi|219669248|ref|YP_002459683.1| D-lactate dehydrogenase (cytochrome) [Desulfitobacterium hafniense DCB-2] gi|219539508|gb|ACL21247.1| D-lactate dehydrogenase (cytochrome) [Desulfitobacterium hafniense DCB-2] Length = 978 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 44/143 (30%), Gaps = 12/143 (8%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 +L+ + + H + P + K + C C C CPS Sbjct: 528 ELMKRIKSAFDPHNLLNPGVIINDNKNVYLENLKAMPASHD-TIDRCTNCGFCQDICPSK 586 Query: 184 WWNSDRYLGPAILLQAYRWLID----SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 + P + + R + D RD + RL D C T C SCP Sbjct: 587 HLTTT----PRMRIILQREISDLKRTGRDPKRLMRLLRDYDYAGNATCATDGLCATSCPL 642 Query: 240 GLNPAKAIAKIKMMLL---DRKI 259 +N ++ + RK+ Sbjct: 643 NINTGDNTKYLRSRAITPATRKV 665 >gi|282860112|ref|ZP_06269188.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella bivia JCVIHMP010] gi|282587099|gb|EFB92328.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella bivia JCVIHMP010] Length = 416 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 12/89 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PF 222 + L +C+ C+ C+ CP +Y GP S + + RL + + Sbjct: 11 ENNLEQCLKCSICTAYCPVSAVEP-KYPGPK----------HSGPDVERYRLKHEKYFEE 59 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP G+ A I + Sbjct: 60 TLKLCLNCKRCEVACPHGVRIADIIQSAR 88 >gi|268679026|ref|YP_003303457.1| hypothetical protein Sdel_0385 [Sulfurospirillum deleyianum DSM 6946] gi|268617057|gb|ACZ11422.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 420 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 25/97 (25%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 Q CV C C C + N D P L E Sbjct: 2 FQFNVTSDACVKCGKCIPVCTIHEINRDEVTSPRGFLDLLSAYQRGDLELDK------NA 55 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C NCT CP L I +++ + + Sbjct: 56 KNIFESCFLCTNCTSVCPNDLPVDMVIEQVRNDIRKK 92 >gi|153952567|ref|YP_001398855.1| NADH dehydrogenase subunit G [Campylobacter jejuni subsp. doylei 269.97] gi|152940013|gb|ABS44754.1| NADH-quinone oxidoreductase, G subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 820 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 65/245 (26%), Gaps = 58/245 (23%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKD-- 106 +D + + + P + C C C + DG +C K+ Sbjct: 8 MDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKEGM 67 Query: 107 ---------IKGAIAVY-------PLPHMSVIKDLVVDMSHFYSQHR-SIEPWLKTVSPK 149 + PL K ++ +F + R +++ + + K Sbjct: 68 VVESDLQNLWDERNEIMQAYCINHPLECGVCDKSGECELQNFTHKSRVNVQKYWIKDTHK 127 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P K + D C++C C T C S P DS D Sbjct: 128 PHKHWGMINYDP------ALCIVCERCITVCKDKIGESALKTVPRGG--------DSVDN 173 Query: 210 FQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LNPAKAI 247 E + D + ++ C CT CP G I Sbjct: 174 SFKENMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQYTSNI 231 Query: 248 AKIKM 252 ++K Sbjct: 232 WELKR 236 >gi|16803182|ref|NP_464667.1| hypothetical protein lmo1142 [Listeria monocytogenes EGD-e] gi|16410558|emb|CAC99220.1| lmo1142 [Listeria monocytogenes EGD-e] Length = 454 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|134299188|ref|YP_001112684.1| heterodisulfide reductase subunit C [Desulfotomaculum reducens MI-1] gi|134051888|gb|ABO49859.1| heterodisulfide reductase, C subunit [Desulfotomaculum reducens MI-1] Length = 188 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 13/95 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C C C++ CP + G Q R + + E L + Sbjct: 26 QEIETCFQCQKCASGCPVAEY------GEMNTNQILRMIQFGL---KDEVLK----SKAI 72 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C CP G+ A + ++ M ++ I Sbjct: 73 WLCVGCETCGARCPNGIRIAAVMDTLREMAIEAGI 107 >gi|301631489|ref|XP_002944830.1| PREDICTED: hypothetical protein LOC100488392 [Xenopus (Silurana) tropicalis] Length = 1458 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 35/115 (30%), Gaps = 19/115 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + + H R+ +G C+ C C CP+ + + Sbjct: 1183 YAFARKVTVYYPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPAMAITIESDVR 1242 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKA 246 + R+ ID L +C C +SCP + A Sbjct: 1243 ADGSRRTTRYDID------------------LTKCIFCGFCEESCPVDSIKFMDA 1279 >gi|239905009|ref|YP_002951748.1| Hme subunit D [Desulfovibrio magneticus RS-1] gi|239794873|dbj|BAH73862.1| Hme subunit D [Desulfovibrio magneticus RS-1] Length = 537 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + R + + L L Sbjct: 83 RSFKIFMDICVRCGACADKCHFFIGGGDPKNMPVLRAELLRSIYRGEFSAAAKVLGKLAG 142 Query: 221 PFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L Y+C C+ CP G++ A+ I + LL Sbjct: 143 ARKLEEDVIKEWFLYFYQCTECRRCSLFCPYGIDTAE-ITMMARELL 188 >gi|224369371|ref|YP_002603535.1| HdrD2 [Desulfobacterium autotrophicum HRM2] gi|223692088|gb|ACN15371.1| HdrD2 [Desulfobacterium autotrophicum HRM2] Length = 175 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 13/88 (14%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 E ++ L C+ C C+ SCP+ + + +R ++ +R+D Sbjct: 1 MDEMKRLKAALNTCIQCGTCTGSCPNADEMD------LVPRKLWRMVL-------MDRVD 47 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 ++ D C + CT CP+GL Sbjct: 48 SILDSRTFTLCSSCYLCTLRCPRGLPLT 75 >gi|160916004|ref|ZP_02078212.1| hypothetical protein EUBDOL_02032 [Eubacterium dolichum DSM 3991] gi|158432480|gb|EDP10769.1| hypothetical protein EUBDOL_02032 [Eubacterium dolichum DSM 3991] Length = 430 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 18/95 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C CS CP+ L P + QA + D+ ERL ++ Sbjct: 353 PYDSISCLRCGQCSDHCPA-------GLQPVRIAQAVKTN----DKSAMERLCAMD---- 397 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP L+ + + K K L K Sbjct: 398 ---CIECGLCTYICPSRLDVTENVRKAKRQLAMAK 429 >gi|332140732|ref|YP_004426470.1| electron transport complex protein RnfC [Alteromonas macleodii str. 'Deep ecotype'] gi|327550754|gb|AEA97472.1| electron transport complex protein RnfC [Alteromonas macleodii str. 'Deep ecotype'] Length = 852 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C+ C+ +CP+ + + Y D+ + + L+ C Sbjct: 381 RPCIRCSACADACPASLLPQQ--MFWHAKAKEY-------DKA---------EEYDLFDC 422 Query: 228 HTIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 423 IECGACAYVCPSEIPLVH 440 >gi|333019266|gb|EGK38551.1| putative pyruvate-flavodoxin oxidoreductase domain protein [Shigella flexneri K-227] Length = 593 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 91 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 149 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 150 MRGQKYVLQMAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 198 >gi|333007309|gb|EGK26791.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella flexneri K-272] Length = 1159 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 657 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 715 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI-KMMLLDR 257 + + + C C + CP KAI + + ++ Sbjct: 716 MRGQKYVLQMAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEE 764 >gi|257094523|ref|YP_003168164.1| electron transport complex protein RnfC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047047|gb|ACV36235.1| electron transport complex, RnfABCDGE type, C subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 583 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ CP L P L R + + L+ C Sbjct: 367 MPCIRCGACAEVCP-------HELQPFELYWFARARNFGK-----------TQEYYLFDC 408 Query: 228 HTIMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 409 IECGCCSYVCPSHIPLVQ 426 >gi|301060696|ref|ZP_07201511.1| cysteine-rich domain protein [delta proteobacterium NaphS2] gi|300445093|gb|EFK09043.1| cysteine-rich domain protein [delta proteobacterium NaphS2] Length = 402 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 15/132 (11%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + S+ + I + KTV + + D C C C T CP WN Sbjct: 2 RRKTWESRPKKIRGFKKTVENIADYKEIIDVIKESGGDAFKRCFQCGLCDTVCP---WNR 58 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R L++ + + ++ C T C Q CP+ + ++ Sbjct: 59 VRSFSMRKLVRQATFGF------------TEIESEEMWLCTTCGRCPQQCPRDVQQIESG 106 Query: 248 AKIKMMLLDRKI 259 ++ + + + Sbjct: 107 VALRRVATEYGV 118 >gi|282849729|ref|ZP_06259113.1| iron-sulfur cluster-binding protein [Veillonella parvula ATCC 17745] gi|294792614|ref|ZP_06757761.1| iron-sulfur cluster-binding protein [Veillonella sp. 6_1_27] gi|294794396|ref|ZP_06759532.1| iron-sulfur cluster-binding protein [Veillonella sp. 3_1_44] gi|282580666|gb|EFB86065.1| iron-sulfur cluster-binding protein [Veillonella parvula ATCC 17745] gi|294454726|gb|EFG23099.1| iron-sulfur cluster-binding protein [Veillonella sp. 3_1_44] gi|294456513|gb|EFG24876.1| iron-sulfur cluster-binding protein [Veillonella sp. 6_1_27] Length = 481 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 17/98 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + + D Sbjct: 306 FQEMLRCIRCGACMNICPVYRHVSGHGYGSVYPGPMGAVLTPLF----------KGYDVA 355 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y CT++CP + + + + + ++ D Sbjct: 356 GDLP--YASTLCGACTENCPVAIPLHELLMEHRHIMAD 391 >gi|218890264|ref|YP_002439128.1| electron transport complex protein RnfC [Pseudomonas aeruginosa LESB58] gi|218770487|emb|CAW26252.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 774 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 23/105 (21%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C C+ CP + Sbjct: 359 ELPEPVPAMPCIRCGDCAQVCPVSLLPQQLHFFALGNEHEQLL----------------- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + LL Sbjct: 402 -AHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKA 445 >gi|149909799|ref|ZP_01898450.1| NuoG2 NADH I CHAIN G 2 [Moritella sp. PE36] gi|149807131|gb|EDM67087.1| NuoG2 NADH I CHAIN G 2 [Moritella sp. PE36] Length = 823 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 51/209 (24%), Gaps = 36/209 (17%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTL-RRSCREGICGSCGMNIDGTNTLAC--------- 100 +++ + PT R C C + I+G L Sbjct: 10 EMEVEEGTTILNAARASTIEIPTFCYQDRLSILASCRMCLIEIEGRPKLEPACATVVSEG 69 Query: 101 -----VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + + L + V D S ++ + K S + + Sbjct: 70 MAVLTHSEKVVASREDMLEILLANHPLDCPVCDKSGECELQDTVFEYGKGDSRLADPKRI 129 Query: 156 QSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 +D Q C+ C C C D LG +DS Sbjct: 130 FRIDDIQLNNVITFNANRCIQCQRCVRVCE--EVVGDVALGT------MERGLDSEITGV 181 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G L C NC + CP G Sbjct: 182 GNSLK---------DCSHCGNCIEVCPVG 201 >gi|312143455|ref|YP_003994901.1| electron transport complex, RnfABCDGE type, C subunit [Halanaerobium sp. 'sapolanicus'] gi|311904106|gb|ADQ14547.1| electron transport complex, RnfABCDGE type, C subunit [Halanaerobium sp. 'sapolanicus'] Length = 443 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L D + C+ CA C CP YL P L++ + + Sbjct: 354 LVFVADEVEEFDPDPCINCAKCVDHCPM-------YLMPTTLVRYAKNNM---------- 396 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ LE +++ C +C+ CP + + K + ++ Sbjct: 397 VEKLE-EYQILNCIECGSCSYVCPSKIPLVHYLRLGKSQAMAKR 439 >gi|288819180|ref|YP_003433528.1| heterodisulfide reductase subunit C [Hydrogenobacter thermophilus TK-6] gi|288788580|dbj|BAI70327.1| heterodisulfide reductase subunit C [Hydrogenobacter thermophilus TK-6] gi|308752762|gb|ADO46245.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6] Length = 241 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + ++ C+ C C+ SCPS + P ++Q R+L E E L ++ Sbjct: 34 DFRFKEYIFGCLNCGVCTASCPSNRFFD---YSPREIVQ--RFL-----EEDVEVLYDMM 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C C CP NP +A ++ + + Sbjct: 84 HEY-IWACSQCFTCWIRCPFVNNPGGLVAIMREVAVR 119 >gi|111222763|ref|YP_713557.1| putative Fe4-S4 ferredoxin [Frankia alni ACN14a] gi|111150295|emb|CAJ61992.1| putative Fe4-S4 ferredoxin [Frankia alni ACN14a] Length = 526 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 46/180 (25%), Gaps = 22/180 (12%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 240 NGRMCLTLPETLITVMGIEKVVPSWRDLEVFLQLLPRSSTGERMNPYTSIWTGVTPGDGP 299 Query: 152 KELLQSHEDRQKI--------DGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQ 198 K D + C+ C+ C CP Y Y GP + Sbjct: 300 KAFHLVLLDNGRTAALGDAVGRDALHCIRCSACLNVCPVYERTGGHAYGSIYPGPIGAVL 359 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + G + ++ Y C CP ++ + +++ +D Sbjct: 360 S--------PQLTGIHTGSDDNASLPYASSLCGACYDVCPVRIDIPSLLVRLRTAHVDAA 411 >gi|313894169|ref|ZP_07827734.1| iron-sulfur cluster-binding protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440993|gb|EFR59420.1| iron-sulfur cluster-binding protein [Veillonella sp. oral taxon 158 str. F0412] Length = 481 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 17/98 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + + D Sbjct: 306 FQEMLRCIRCGACMNICPVYRHVSGHGYGSVYPGPMGAVLTPLF----------KGYDVA 355 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y CT++CP + + + + + ++ D Sbjct: 356 GDLP--YASTLCGACTENCPVAIPLHELLMEHRHIMAD 391 >gi|238018424|ref|ZP_04598850.1| hypothetical protein VEIDISOL_00250 [Veillonella dispar ATCC 17748] gi|303228712|ref|ZP_07315536.1| iron-sulfur cluster-binding protein [Veillonella atypica ACS-134-V-Col7a] gi|237864895|gb|EEP66185.1| hypothetical protein VEIDISOL_00250 [Veillonella dispar ATCC 17748] gi|302516623|gb|EFL58541.1| iron-sulfur cluster-binding protein [Veillonella atypica ACS-134-V-Col7a] Length = 481 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 17/98 (17%) Query: 164 IDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C CP Y Y GP + + + D Sbjct: 306 FQEMLRCIRCGACMNICPVYRHISGHGYGSVYPGPMGAVLTPLF----------KGYDVA 355 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D Y CT++CP + + + + + ++ D Sbjct: 356 GDLP--YASTLCGACTENCPVAIPLHELLMEHRHIMAD 391 >gi|222150971|ref|YP_002560124.1| formate dehydrogenase alpha subunit [Macrococcus caseolyticus JCSC5402] gi|222120093|dbj|BAH17428.1| formate dehydrogenase alpha subunit [Macrococcus caseolyticus JCSC5402] Length = 988 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 62/203 (30%), Gaps = 27/203 (13%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDI-- 107 ++ + + L K P L C +C + ++G +C +KD Sbjct: 17 PMEVPNNVSILDYLRFKGIDVPALCYHPDLGAIETCDACIVEVNGELVRSCSTQLKDGDI 76 Query: 108 --------KGAIAV---YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS-PKPAKELL 155 A + L + + + + + H +++ + + Sbjct: 77 VKTGSSEAFEAQMIAMDRILRNHELYCTVCDFNNGNCTVHNTVKNLKIDHQATAQSPKGA 136 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + + +C++C C +C + N + + R + D + Sbjct: 137 PKNMGKFYRYDPDQCILCGRCVQACQNVQVNETLMIDWELERP--RVIWDGNTDL----- 189 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 N++D C +C+ CP Sbjct: 190 -NIDDS----SCVNCGHCSTVCP 207 >gi|83589666|ref|YP_429675.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572580|gb|ABC19132.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 333 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 21/118 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWN----------------SDRYLGPAILLQA 199 + E +C+ C C+ CP+ D + A Sbjct: 213 RMFEHPYWTAVSRKCLGCGACTYLCPTCHCFDIQGENQGNSGYKFRCWDSCMFSEYTRMA 272 Query: 200 YRWLIDS--RDEFQGERLDNLE---DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ + L L+ + + + C C CP ++ + I ++K Sbjct: 273 GGHNPRPSKKERLRNRFLHKLQYFPERYGKFACVGCGRCLDRCPVNVDITRVIREVKE 330 >gi|284039950|ref|YP_003389880.1| NADH-quinone oxidoreductase, chain I [Spirosoma linguale DSM 74] gi|283819243|gb|ADB41081.1| NADH-quinone oxidoreductase, chain I [Spirosoma linguale DSM 74] Length = 188 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 13/119 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++ L + +SHF+ + +I+ V H ++ G C C C+ +C Sbjct: 26 IVGGLAITISHFFRKKPTIQY--PEVKKYLGPIYRGHHILKRDEQGRERCTACGLCAVAC 83 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 P+ + YR E+ + + L RC C ++CPK Sbjct: 84 PAEAISMVAAERKKGEENLYR----------EEKYAAVYEINML-RCIFCGLCEEACPK 131 >gi|15920260|ref|NP_375929.1| formate dehydrogenase subunit alpha [Sulfolobus tokodaii str. 7] gi|15621042|dbj|BAB65038.1| 973aa long hypothetical formate dehydrogenase alpha subunit [Sulfolobus tokodaii str. 7] Length = 973 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 53/206 (25%), Gaps = 29/206 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDI 107 + L +LD LL N + C +C + ++G AC + D Sbjct: 9 EISLKESNITILD-LLRENNIYISHICYNEGLVPIQSCDTCLVEVNGKLVRACSTKVTDG 67 Query: 108 KGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 + L + + + + + H ++ K Sbjct: 68 MSIVTHSERAVNARKKAVERILKYHKLYCTVCENNNGDCPLHEAVIKLGINSQQYIEKPY 127 Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + +C++C C +C + N ++ D Sbjct: 128 PIDDSGPFYVYNPSQCILCGRCVEACQDFAVNEVIWINW--------------DLNPPRV 173 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + +P C C CP Sbjct: 174 VWDNGNPIGNSSCVNCGTCVTVCPVN 199 >gi|16800175|ref|NP_470443.1| hypothetical protein lin1106 [Listeria innocua Clip11262] gi|16413565|emb|CAC96337.1| lin1106 [Listeria innocua Clip11262] Length = 454 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 235 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 292 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D + C C +CP GL+P + +K LL + + Sbjct: 293 ITDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 341 >gi|225024115|ref|ZP_03713307.1| hypothetical protein EIKCOROL_00983 [Eikenella corrodens ATCC 23834] gi|224943140|gb|EEG24349.1| hypothetical protein EIKCOROL_00983 [Eikenella corrodens ATCC 23834] Length = 159 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTTRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|85858320|ref|YP_460522.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85859238|ref|YP_461440.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85860701|ref|YP_462903.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85721411|gb|ABC76354.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85722329|gb|ABC77272.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85723792|gb|ABC78735.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] Length = 385 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 15/109 (13%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + + D C C C CP W ++ I+ +A L D Sbjct: 6 PFKEIIEEVKAHGGDAFKRCFQCGLCDAVCP--WNKVRQFSMRKIVREATFGLTD----- 58 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++RC T C Q CP+ + ++ ++ + + + Sbjct: 59 --------IESEEMWRCTTCGRCPQQCPRDVKQIESGVALRRIATEYGV 99 >gi|312797310|ref|YP_004030232.1| Anaerobic glycerol-3-phosphate dehydrogenase membrane anchor subunit [Burkholderia rhizoxinica HKI 454] gi|312169085|emb|CBW76088.1| Anaerobic glycerol-3-phosphate dehydrogenase membrane anchor subunit (EC 1.1.5.3) [Burkholderia rhizoxinica HKI 454] Length = 1441 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 940 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 999 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 1000 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 1030 >gi|307260625|ref|ZP_07542317.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869702|gb|EFN01487.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 770 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|307244979|ref|ZP_07527076.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253932|ref|ZP_07535784.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258386|ref|ZP_07540127.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854144|gb|EFM86352.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863136|gb|EFM95078.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867570|gb|EFM99417.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 725 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|303250916|ref|ZP_07337107.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650222|gb|EFL80387.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 770 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|296163607|ref|ZP_06846341.1| FAD linked oxidase domain protein [Burkholderia sp. Ch1-1] gi|295886145|gb|EFG66029.1| FAD linked oxidase domain protein [Burkholderia sp. Ch1-1] Length = 1364 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|209521834|ref|ZP_03270512.1| FAD linked oxidase domain protein [Burkholderia sp. H160] gi|209497738|gb|EDZ97915.1| FAD linked oxidase domain protein [Burkholderia sp. H160] Length = 1364 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|187922653|ref|YP_001894295.1| FAD linked oxidase [Burkholderia phytofirmans PsJN] gi|187713847|gb|ACD15071.1| FAD linked oxidase domain protein [Burkholderia phytofirmans PsJN] Length = 1364 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|165975623|ref|YP_001651216.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875724|gb|ABY68772.1| putative iron-sulfur binding NADH dehydrogenase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 770 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|145592341|ref|YP_001154343.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145284109|gb|ABP51691.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 419 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 27/97 (27%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C C C CPSY + P L+ R R E Sbjct: 27 AFYPHFVSASCTRCGNCVEICPSYMATGEIKNSPMGRLELIR-----RGAAPEELFT--- 78 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 +C C CP GL+ A+ ++ L Sbjct: 79 ---SFSKCTMCKRCAYRCPLGLDVAEVTRIVRESLAR 112 >gi|91781792|ref|YP_556998.1| putative oxidoreductase [Burkholderia xenovorans LB400] gi|91685746|gb|ABE28946.1| Putative oxidoreductase [Burkholderia xenovorans LB400] Length = 1349 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 841 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 901 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 931 >gi|56550917|ref|YP_161756.1| hypothetical protein ZMO0021 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762319|ref|ZP_04760399.1| protein of unknown function DUF162 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56542491|gb|AAV88645.1| protein of unknown function DUF162 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373113|gb|EER62752.1| protein of unknown function DUF162 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 480 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 23/155 (14%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + V L ++ + SHF + + E + V ++ L Sbjct: 263 IPRLEDVPVFVRLLSRSALGSPITQYTSHFRAPRKGGEMHIILVDNGRSERLKNET---- 318 Query: 163 KIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +C+ C C +CP + Y GP L+ + + + RL Sbjct: 319 -FRHSLKCIRCGACMNTCPVFRRSGGLSYGATYAGPIGLIIDPTYNLH-----KYSRLP- 371 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + +C CP +N + IA + Sbjct: 372 -------FSSTLNGSCANVCPVKINIHEQIASWRQ 399 >gi|305666979|ref|YP_003863266.1| FAD linked oxidase-like protein [Maribacter sp. HTCC2170] gi|88709211|gb|EAR01445.1| FAD linked oxidase-like protein [Maribacter sp. HTCC2170] Length = 970 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 11/112 (9%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGP 193 + L+ + + +C C + CPSY + Sbjct: 534 RYEIDREEPEIATLMDFSDSEGILKAAEKCNGSGDCRKTHHMKGGMCPSYHATKNEKDTT 593 Query: 194 AILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 A R +L + E + ++ + C + C CP ++ A Sbjct: 594 RGRANALREFLTNGERENKFDQKEL---KEVFDLCLSCKACASECPSNVDVA 642 >gi|53728861|ref|ZP_00348259.1| COG4656: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207655|ref|YP_001052880.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae L20] gi|126096447|gb|ABN73275.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 770 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|91204519|emb|CAJ70747.1| hypothetical iron sulfur protein [Candidatus Kuenenia stuttgartiensis] Length = 409 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 ++ + +C C C + CP + + + + + + + D Sbjct: 1 MDNNAFKTEIDKCAKCGKCRSICPVFLETGEESMVARGRISLAEAIRNGEIFYTERLRDY 60 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C+ CP ++ I + Sbjct: 61 LL------SCKKCFRCSSICPSNVDYDLIIQTM 87 >gi|253701410|ref|YP_003022599.1| hypothetical protein GM21_2808 [Geobacter sp. M21] gi|251776260|gb|ACT18841.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. M21] Length = 383 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 15/87 (17%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C C C + CP WN R +++ + L +E ++R Sbjct: 22 LKYCYQCGLCDSVCP---WNRVRQFSMRKVVRQGVFG-----------LTEIEQEE-IWR 66 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C T C CP+G+N +A ++ M Sbjct: 67 CSTCGTCPSRCPRGVNQIEAGVALRTM 93 >gi|325264063|ref|ZP_08130795.1| oxidoreductase, aldo/keto reductase family [Clostridium sp. D5] gi|324030547|gb|EGB91830.1| oxidoreductase, aldo/keto reductase family [Clostridium sp. D5] Length = 379 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 7/126 (5%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q ++ + P E+ E ++ + C C C+ CP + L Sbjct: 258 NMEQIKANILTYEEDKPLNEAEMKVLLETADRMMNILPCTACRYCTAHCP-------KGL 310 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 LL Y + +D L + R C +C CP+ + A A+ Sbjct: 311 DIPTLLSLYNETRYTNGLITHMAVDALAEEKRPQNCIGCKSCEAVCPQQIEIAGAMRDFT 370 Query: 252 MMLLDR 257 L + Sbjct: 371 EKLQEE 376 >gi|269203939|ref|YP_003283208.1| formate dehydrogenase, alpha subunit, putative [Staphylococcus aureus subsp. aureus ED98] gi|262076229|gb|ACY12202.1| formate dehydrogenase, alpha subunit, putative [Staphylococcus aureus subsp. aureus ED98] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|260220355|emb|CBA27809.1| hypothetical protein Csp_A04140 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1316 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 837 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISVKHWEEFEDV 896 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 897 --ADHCTVCHKCESPCPVKIDFGDVTMNMRNLL 927 >gi|190149438|ref|YP_001967963.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262757|ref|ZP_07544384.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914569|gb|ACE60821.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871902|gb|EFN03619.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 770 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|78042623|ref|YP_359774.1| putative heterodisulfide reductase subunit C [Carboxydothermus hydrogenoformans Z-2901] gi|77994738|gb|ABB13637.1| putative heterodisulfide reductase, C subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 195 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 14/99 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +++ L +C C C+ CP + P ++ S+ E L Sbjct: 19 EKESGQHLRDCYQCGKCTAGCPVAYAMDYT---PNQIMHL------SKIGIGEEVLR--- 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + CT CPK ++ A+ + ++ ++ RK Sbjct: 67 -SRTIWICASCNTCTTRCPKNIDIARVMDSLR-IIARRK 103 >gi|57652241|ref|YP_187108.1| formate dehydrogenase, alpha subunit, putative [Staphylococcus aureus subsp. aureus COL] gi|87161471|ref|YP_494893.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196225|ref|YP_501044.1| formate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222422|ref|YP_001333244.1| formate dehydrogenase-like protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510504|ref|YP_001576163.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140238|ref|ZP_03564731.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|262048568|ref|ZP_06021452.1| hypothetical protein SAD30_0107 [Staphylococcus aureus D30] gi|262052311|ref|ZP_06024515.1| hypothetical protein SA930_0966 [Staphylococcus aureus 930918-3] gi|282922180|ref|ZP_06329876.1| formate dehydrogenase [Staphylococcus aureus A9765] gi|284025332|ref|ZP_06379730.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus 132] gi|294848847|ref|ZP_06789592.1| formate dehydrogenase [Staphylococcus aureus A9754] gi|81693906|sp|Q5HDP9|FDHL_STAAC RecName: Full=Putative formate dehydrogenase SACOL2301 gi|123406992|sp|Q2FVV9|FDHL_STAA8 RecName: Full=Putative formate dehydrogenase SAOUHSC_02582 gi|123722356|sp|Q2FEI5|FDHL_STAA3 RecName: Full=Putative formate dehydrogenase SAUSA300_2258 gi|57286427|gb|AAW38521.1| formate dehydrogenase, alpha subunit, putative [Staphylococcus aureus subsp. aureus COL] gi|87127445|gb|ABD21959.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203783|gb|ABD31593.1| formate dehydrogenase, alpha subunit, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150375222|dbj|BAF68482.1| formate dehydrogenase homolog [Staphylococcus aureus subsp. aureus str. Newman] gi|160369313|gb|ABX30284.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|259159830|gb|EEW44870.1| hypothetical protein SA930_0966 [Staphylococcus aureus 930918-3] gi|259163426|gb|EEW47984.1| hypothetical protein SAD30_0107 [Staphylococcus aureus D30] gi|269941895|emb|CBI50305.1| putative bifunctional protein [Staphylococcus aureus subsp. aureus TW20] gi|282593648|gb|EFB98641.1| formate dehydrogenase [Staphylococcus aureus A9765] gi|294824226|gb|EFG40650.1| formate dehydrogenase [Staphylococcus aureus A9754] gi|302752180|gb|ADL66357.1| molybdopterin oxidoreductase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315198154|gb|EFU28485.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus CGS01] gi|329314992|gb|AEB89405.1| Putative formate dehydrogenase [Staphylococcus aureus subsp. aureus T0131] gi|329732023|gb|EGG68378.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus 21189] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|167038505|ref|YP_001666083.1| RnfABCDGE type electron transport complex subunit C [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751374|ref|ZP_05492253.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter ethanolicus CCSD1] gi|320116900|ref|YP_004187059.1| RnfABCDGE type electron transport complex subunit C [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857339|gb|ABY95747.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749756|gb|EEU62781.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter ethanolicus CCSD1] gi|319929991|gb|ADV80676.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 443 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 18/90 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP L I + + D + E + L+ C Sbjct: 369 PCIKCGKCVEVCPVNL------LPLYISSYSLKKNFD-----KAEEYNALD-------CV 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP A++I K ++ +K Sbjct: 411 ECGSCSYICPAKRPLAESIRLAKREIIAKK 440 >gi|329723396|gb|EGG59925.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus 21172] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|307251697|ref|ZP_07533602.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860894|gb|EFM92902.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 685 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|303251991|ref|ZP_07338162.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649421|gb|EFL79606.1| electron transport complex protein RnfC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 729 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|329902902|ref|ZP_08273300.1| tungsten-containing formate dehydrogenase alpha subunit [Oxalobacteraceae bacterium IMCC9480] gi|327548566|gb|EGF33227.1| tungsten-containing formate dehydrogenase alpha subunit [Oxalobacteraceae bacterium IMCC9480] Length = 938 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 29/211 (13%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRS-CREGICGSCGMNIDGTNTLAC 100 M + ++ + L+ + ++ P L + G C +C + IDG LA Sbjct: 16 MVEFTINGRAVSARSNETLIEVADREGIEVPRLCYKPGLDAVGNCRACMVEIDGERVLAP 75 Query: 101 VK----DMKDIKGAIAVYPLPHM-SVIKDLVVDM-SHFYSQHRSIEPW-----LKTVSPK 149 + + L V++ L DM Y++H ++ W + Sbjct: 76 SCCRAPKAGMVVTTDSARALKAQQMVLEMLQSDMPETAYTRHNEVDQWALKLAVGKPRFA 135 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 P + + H L C+ C C +C N +G A + D Sbjct: 136 PREAVRPDHSHPAMTVNLDACIQCTRCVRACRDEQVND--VIGLAFRGSHAEIVFD---- 189 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + DP C C Q+CP G Sbjct: 190 --------MGDPMGNSTCVACGECVQACPTG 212 >gi|297569438|ref|YP_003690782.1| heterodisulfide reductase, subunit E (HdrE) [Desulfurivibrio alkaliphilus AHT2] gi|296925353|gb|ADH86163.1| heterodisulfide reductase, subunit E (HdrE) [Desulfurivibrio alkaliphilus AHT2] Length = 397 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 13/88 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CS CP + D P + +W + + L + Sbjct: 25 LKKCYQCATCSVVCP---LSGDDKPFPRKEMIWSQWGL----------KEKLVADPDVML 71 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 CH +CT +CP+G P + I+ Sbjct: 72 CHQCGDCTTNCPRGAKPGDVLGAIRAYA 99 >gi|295106636|emb|CBL04179.1| Fe-S oxidoreductase [Gordonibacter pamelaeae 7-10-1-b] Length = 554 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 13/111 (11%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + R + CV C C+ C Y D P + + R + G+ L Sbjct: 79 MKKYRSFKLYMDVCVRCGACADKCHFYQGTGDPKNMPVVRAELLRSVYRRYFTTSGKLLG 138 Query: 217 NLEDP------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + Y+C C+ CP G++ A+ I + LL Sbjct: 139 ELVGARDLTEDVIKEWHYYFYQCTECRRCSVFCPYGIDQAE-ITLMGRELL 188 >gi|254373098|ref|ZP_04988587.1| hypothetical protein FTCG_00675 [Francisella tularensis subsp. novicida GA99-3549] gi|151570825|gb|EDN36479.1| hypothetical protein FTCG_00675 [Francisella novicida GA99-3549] Length = 906 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D++ + + + + ++I ++ + E D + +C+ C C CPS Sbjct: 494 DIMWQIKNLFDK-QNILNPDVKLTKDTSLHTKNLKELNSVDDQIDKCMECGYCEPVCPSR 552 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + L P R + E + + L + D + + C T C CP ++ Sbjct: 553 NLS----LTPRQRNTVARKIETLEGEQKQKWLKDY-DYYGIQTCATTSLCKMRCPVDIDT 607 Query: 244 AKAI 247 I Sbjct: 608 GAFI 611 >gi|149202899|ref|ZP_01879870.1| putative glycolate oxidase [Roseovarius sp. TM1035] gi|149143445|gb|EDM31481.1| putative glycolate oxidase [Roseovarius sp. TM1035] Length = 976 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 11/96 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D R + R D + + Sbjct: 558 EMCNNNGACRKLAGGAMCPSYRVTRDERDATRGRANTLRLALSGRLGQNALFSDEMAETL 617 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C C + CP G++ +AK+K +L ++ Sbjct: 618 KL--CVGCKACKRECPTGVD----MAKMKTEVLYQR 647 >gi|15925299|ref|NP_372833.1| formate dehydrogenase-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|81774830|sp|Q931G2|FDHL_STAAM RecName: Full=Putative formate dehydrogenase SAV2309 gi|14248083|dbj|BAB58471.1| formate dehydrogenase homolog [Staphylococcus aureus subsp. aureus Mu50] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|15927889|ref|NP_375422.1| hypothetical protein SA2102 [Staphylococcus aureus subsp. aureus N315] gi|21283958|ref|NP_647046.1| hypothetical protein MW2229 [Staphylococcus aureus subsp. aureus MW2] gi|49487092|ref|YP_044313.1| putative bifunctional protein [Staphylococcus aureus subsp. aureus MSSA476] gi|148268746|ref|YP_001247689.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394813|ref|YP_001317488.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus JH1] gi|156980624|ref|YP_001442883.1| formate dehydrogenase-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|255007086|ref|ZP_05145687.2| formate dehydrogenase-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794652|ref|ZP_05643631.1| formate dehydrogenase [Staphylococcus aureus A9781] gi|258408744|ref|ZP_05681028.1| formate dehydrogenase [Staphylococcus aureus A9763] gi|258422342|ref|ZP_05685254.1| formate dehydrogenase [Staphylococcus aureus A9719] gi|258439732|ref|ZP_05690478.1| formate dehydrogenase [Staphylococcus aureus A9299] gi|258442712|ref|ZP_05691272.1| formate dehydrogenase [Staphylococcus aureus A8115] gi|258446589|ref|ZP_05694744.1| formate dehydrogenase [Staphylococcus aureus A6300] gi|258450293|ref|ZP_05698385.1| formate dehydrogenase [Staphylococcus aureus A6224] gi|258455334|ref|ZP_05703294.1| formate dehydrogenase [Staphylococcus aureus A5937] gi|282893750|ref|ZP_06301982.1| formate dehydrogenase [Staphylococcus aureus A8117] gi|295404990|ref|ZP_06814803.1| formate dehydrogenase [Staphylococcus aureus A8819] gi|296275008|ref|ZP_06857515.1| formate dehydrogenase-like protein [Staphylococcus aureus subsp. aureus MR1] gi|297244048|ref|ZP_06927938.1| formate dehydrogenase [Staphylococcus aureus A8796] gi|81648779|sp|Q6G711|FDHL_STAAS RecName: Full=Putative formate dehydrogenase SAS2201 gi|81704199|sp|Q7A057|FDHL_STAAW RecName: Full=Putative formate dehydrogenase MW2229 gi|81781059|sp|Q99RW4|FDHL_STAAN RecName: Full=Putative formate dehydrogenase SA2102 gi|13702109|dbj|BAB43401.1| SA2102 [Staphylococcus aureus subsp. aureus N315] gi|21205400|dbj|BAB96094.1| MW2229 [Staphylococcus aureus subsp. aureus MW2] gi|49245535|emb|CAG44012.1| putative bifunctional protein [Staphylococcus aureus subsp. aureus MSSA476] gi|147741815|gb|ABQ50113.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus JH9] gi|149947265|gb|ABR53201.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus JH1] gi|156722759|dbj|BAF79176.1| formate dehydrogenase homolog [Staphylococcus aureus subsp. aureus Mu3] gi|257788624|gb|EEV26964.1| formate dehydrogenase [Staphylococcus aureus A9781] gi|257840427|gb|EEV64887.1| formate dehydrogenase [Staphylococcus aureus A9763] gi|257841773|gb|EEV66210.1| formate dehydrogenase [Staphylococcus aureus A9719] gi|257847508|gb|EEV71510.1| formate dehydrogenase [Staphylococcus aureus A9299] gi|257851833|gb|EEV75767.1| formate dehydrogenase [Staphylococcus aureus A8115] gi|257854657|gb|EEV77605.1| formate dehydrogenase [Staphylococcus aureus A6300] gi|257856385|gb|EEV79294.1| formate dehydrogenase [Staphylococcus aureus A6224] gi|257862545|gb|EEV85313.1| formate dehydrogenase [Staphylococcus aureus A5937] gi|282763808|gb|EFC03936.1| formate dehydrogenase [Staphylococcus aureus A8117] gi|294969935|gb|EFG45953.1| formate dehydrogenase [Staphylococcus aureus A8819] gi|297178826|gb|EFH38071.1| formate dehydrogenase [Staphylococcus aureus A8796] gi|312830655|emb|CBX35497.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129605|gb|EFT85596.1| hypothetical protein CGSSa03_08850 [Staphylococcus aureus subsp. aureus CGS03] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|323440010|gb|EGA97725.1| formate dehydrogenase alpha subunit [Staphylococcus aureus O11] Length = 984 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|288942376|ref|YP_003444616.1| RnfABCDGE type electron transport complex subunit C [Allochromatium vinosum DSM 180] gi|288897748|gb|ADC63584.1| electron transport complex, RnfABCDGE type, C subunit [Allochromatium vinosum DSM 180] Length = 504 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C +CP L ++A E +R L C Sbjct: 367 RPCIRCAGCVQACPCGLVP----LEMVAHIRA------GDLEGAVKR--------GLMDC 408 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C CP + + + K + R Sbjct: 409 IGCGSCAYVCPGHIPLVQYLNHAKGEMAARG 439 >gi|15676175|ref|NP_273307.1| NADH dehydrogenase subunit I [Neisseria meningitidis MC58] gi|59802064|ref|YP_208776.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA 1090] gi|121634122|ref|YP_974367.1| NADH dehydrogenase subunit I [Neisseria meningitidis FAM18] gi|161870814|ref|YP_001599987.1| NADH dehydrogenase subunit I [Neisseria meningitidis 053442] gi|194099639|ref|YP_002002770.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae NCCP11945] gi|218767059|ref|YP_002341571.1| NADH dehydrogenase subunit I [Neisseria meningitidis Z2491] gi|225077027|ref|ZP_03720226.1| hypothetical protein NEIFLAOT_02079 [Neisseria flavescens NRL30031/H210] gi|240014994|ref|ZP_04721907.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae DGI18] gi|240017442|ref|ZP_04723982.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA6140] gi|240081581|ref|ZP_04726124.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA19] gi|240113863|ref|ZP_04728353.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae MS11] gi|240116594|ref|ZP_04730656.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID18] gi|240118818|ref|ZP_04732880.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID1] gi|240122063|ref|ZP_04735025.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID24-1] gi|240124357|ref|ZP_04737313.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID332] gi|240126569|ref|ZP_04739455.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae SK-92-679] gi|240129034|ref|ZP_04741695.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|241760745|ref|ZP_04758837.1| NADH-quinone oxidoreductase, i subunit [Neisseria flavescens SK114] gi|254494618|ref|ZP_05107789.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 1291] gi|254805706|ref|YP_003083927.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha14] gi|255067292|ref|ZP_05319147.1| NADH dehydrogenase, I subunit [Neisseria sicca ATCC 29256] gi|260439645|ref|ZP_05793461.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae DGI2] gi|261364357|ref|ZP_05977240.1| NADH dehydrogenase, I subunit [Neisseria mucosa ATCC 25996] gi|261378531|ref|ZP_05983104.1| NADH dehydrogenase, I subunit [Neisseria cinerea ATCC 14685] gi|268685149|ref|ZP_06152011.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-92-679] gi|298370371|ref|ZP_06981687.1| NADH dehydrogenase (ubiquinone), I subunit [Neisseria sp. oral taxon 014 str. F0314] gi|75355482|sp|Q5F623|NUOI_NEIG1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81542192|sp|Q9JQM2|NUOI_NEIMA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81832764|sp|Q7DDS1|NUOI_NEIMB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633533|sp|A1KRT1|NUOI_NEIMF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|7225474|gb|AAF40705.1| NADH dehydrogenase I, I subunit [Neisseria meningitidis MC58] gi|59718959|gb|AAW90364.1| putative NADH dehydrogenase I chain I [Neisseria gonorrhoeae FA 1090] gi|120865828|emb|CAM09560.1| NADH dehydrogenase I chain I [Neisseria meningitidis FAM18] gi|121051067|emb|CAM07337.1| NADH dehydrogenase I chain I [Neisseria meningitidis Z2491] gi|161596367|gb|ABX74027.1| NADH dehydrogenase I chain I [Neisseria meningitidis 053442] gi|193934929|gb|ACF30753.1| NADH dehydrogenase I chain I [Neisseria gonorrhoeae NCCP11945] gi|224951584|gb|EEG32793.1| hypothetical protein NEIFLAOT_02079 [Neisseria flavescens NRL30031/H210] gi|226513658|gb|EEH63003.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 1291] gi|241318926|gb|EER55452.1| NADH-quinone oxidoreductase, i subunit [Neisseria flavescens SK114] gi|254669248|emb|CBA08124.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha14] gi|254670964|emb|CBA07648.1| NADH-ubiquinone oxidoreductase, chain I [Neisseria meningitidis alpha153] gi|254674112|emb|CBA09896.1| NADH-ubiquinone oxidoreductase, chain I [Neisseria meningitidis alpha275] gi|255048443|gb|EET43907.1| NADH dehydrogenase, I subunit [Neisseria sicca ATCC 29256] gi|268625433|gb|EEZ57833.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-92-679] gi|269145081|gb|EEZ71499.1| NADH dehydrogenase, I subunit [Neisseria cinerea ATCC 14685] gi|288567621|gb|EFC89181.1| NADH dehydrogenase, I subunit [Neisseria mucosa ATCC 25996] gi|298281831|gb|EFI23320.1| NADH dehydrogenase (ubiquinone), I subunit [Neisseria sp. oral taxon 014 str. F0314] gi|316985179|gb|EFV64131.1| NADH-quinone oxidoreductase subunit 9 [Neisseria meningitidis H44/76] gi|319411266|emb|CBY91673.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I; NDH-1, chain I) [Neisseria meningitidis WUE 2594] gi|325129047|gb|EGC51897.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis N1568] gi|325131604|gb|EGC54311.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M6190] gi|325135054|gb|EGC57682.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M13399] gi|325137077|gb|EGC59673.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M0579] gi|325139141|gb|EGC61687.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis ES14902] gi|325141087|gb|EGC63590.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis CU385] gi|325143091|gb|EGC65438.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis 961-5945] gi|325143161|gb|EGC65507.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis 961-5945] gi|325145244|gb|EGC67523.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240013] gi|325145315|gb|EGC67593.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240013] gi|325197536|gb|ADY92992.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis G2136] gi|325199454|gb|ADY94909.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis H44/76] gi|325202921|gb|ADY98375.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240149] gi|325203367|gb|ADY98820.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240355] gi|325205336|gb|ADZ00789.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M04-240196] gi|325207280|gb|ADZ02732.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis NZ-05/33] Length = 159 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|332159195|ref|YP_004424474.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus sp. NA2] gi|331034658|gb|AEC52470.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus sp. NA2] Length = 334 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 20/115 (17%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRW---------------- 202 R +C+ C C+ CP+ D ++ L+ R+ Sbjct: 220 RVWKKYAEKCLGCGNCTLVCPTCRCYEVCDNWIKAYESLRIRRYDSCFMPTHGLVAGGHN 279 Query: 203 LIDSRDEFQGERL--DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +R + R + DP + C C + CP + K + +++ L+ Sbjct: 280 FRQTRLDRFRHRYYCKSYFDPSSGFNCVGCGRCDEFCPAKIEHVKVLEEVREGLI 334 >gi|304409462|ref|ZP_07391082.1| D-lactate dehydrogenase (cytochrome) [Shewanella baltica OS183] gi|307303820|ref|ZP_07583573.1| D-lactate dehydrogenase (cytochrome) [Shewanella baltica BA175] gi|304351980|gb|EFM16378.1| D-lactate dehydrogenase (cytochrome) [Shewanella baltica OS183] gi|306912718|gb|EFN43141.1| D-lactate dehydrogenase (cytochrome) [Shewanella baltica BA175] Length = 934 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|300114339|ref|YP_003760914.1| FAD linked oxidase domain-containing protein [Nitrosococcus watsonii C-113] gi|299540276|gb|ADJ28593.1| FAD linked oxidase domain protein [Nitrosococcus watsonii C-113] Length = 967 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 12/110 (10%) Query: 154 LLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +D+ C C T CPSY + G +R ++ Sbjct: 545 FFDWRKDQGLQGAAARCNGAGVCLKQAGQGTMCPSYMAAGEELHGTRGRANVFRQVLALS 604 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 GE L L C C CP G++ +A +K L + Sbjct: 605 GGLTGENSPLL--KEALDLCLACKGCKTECPAGVD----MALMKAEFLQQ 648 >gi|291617337|ref|YP_003520079.1| RnfC [Pantoea ananatis LMG 20103] gi|291152367|gb|ADD76951.1| RnfC [Pantoea ananatis LMG 20103] Length = 667 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y W D + + C Sbjct: 377 CIRCSACADACPAKLLPQQLY-----------WYSKGGDHDKAR-------AHHIDDCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|285817972|gb|ADC38459.1| Formate dehydrogenase related protein [Staphylococcus aureus 04-02981] Length = 984 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|217974166|ref|YP_002358917.1| FAD linked oxidase domain-containing protein [Shewanella baltica OS223] gi|217499301|gb|ACK47494.1| FAD linked oxidase domain protein [Shewanella baltica OS223] Length = 934 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|167038752|ref|YP_001661737.1| RnfABCDGE type electron transport complex subunit C [Thermoanaerobacter sp. X514] gi|300913662|ref|ZP_07130979.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter sp. X561] gi|307723323|ref|YP_003903074.1| RnfABCDGE type electron transport complex subunit C [Thermoanaerobacter sp. X513] gi|166852992|gb|ABY91401.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter sp. X514] gi|300890347|gb|EFK85492.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter sp. X561] gi|307580384|gb|ADN53783.1| electron transport complex, RnfABCDGE type, C subunit [Thermoanaerobacter sp. X513] Length = 443 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 18/90 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP L I + + D + E + L+ C Sbjct: 369 PCIKCGKCVEVCPVNL------LPLYISSYSLKKNFD-----KAEEYNALD-------CV 410 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP A++I K ++ +K Sbjct: 411 ECGSCSYICPAKRPLAESIRLAKREIIAKK 440 >gi|160874494|ref|YP_001553810.1| FAD linked oxidase domain-containing protein [Shewanella baltica OS195] gi|160860016|gb|ABX48550.1| FAD linked oxidase domain protein [Shewanella baltica OS195] gi|315266733|gb|ADT93586.1| D-lactate dehydrogenase (cytochrome) [Shewanella baltica OS678] Length = 934 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|83589665|ref|YP_429674.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572579|gb|ABC19131.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 303 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 27/97 (27%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C C CP+ + + SR E Q + Sbjct: 183 AFWTGAYDRCLRCYACRNICPACNCRECIFDRAQSGWCGKQM---SRSENQFFAITRAM- 238 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMM 253 RC C + CP+G+ K I + + Sbjct: 239 -HVAGRCIECGECERVCPEGIPIMALNKKIIKDLNEL 274 >gi|82751902|ref|YP_417643.1| formate dehydrogenase alpha subunit [Staphylococcus aureus RF122] gi|123727500|sp|Q2YYT1|FDHL_STAAB RecName: Full=Putative formate dehydrogenase SAB2186c gi|82657433|emb|CAI81875.1| formate dehydrogenase alpha subunit [Staphylococcus aureus RF122] Length = 984 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|329935785|ref|ZP_08285589.1| oxidoreductase, FAD-binding [Streptomyces griseoaurantiacus M045] gi|329304776|gb|EGG48650.1| oxidoreductase, FAD-binding [Streptomyces griseoaurantiacus M045] Length = 1031 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 33/123 (26%), Gaps = 9/123 (7%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----C 180 VV Q R W ++ + CV C + C Sbjct: 517 VVHPRPVDGQLRLGASWTPMTPETHFGY---PQDEHSFTRAVLRCVGIGNCRSHQGGVMC 573 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 PSY + + ++D D + + E L C C CP Sbjct: 574 PSYRATKEEEHSTRGRSRLLFEMLDGHADSAVQDGWRSTEVKDALDLCLACKGCKSDCPT 633 Query: 240 GLN 242 G++ Sbjct: 634 GVD 636 >gi|328474563|gb|EGF45368.1| electron transport complex protein RnfC [Vibrio parahaemolyticus 10329] Length = 907 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 18/116 (15%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C C+ +CP+ L P L Sbjct: 350 SQVPITKTANCILAPTRHEISAHQYEMECIRCGQCAEACPAS-------LLPQQLQWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E D LE L C C CP + + + K + R Sbjct: 401 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTR 447 >gi|152999871|ref|YP_001365552.1| FAD linked oxidase domain-containing protein [Shewanella baltica OS185] gi|151364489|gb|ABS07489.1| FAD linked oxidase domain protein [Shewanella baltica OS185] Length = 934 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|154420549|ref|XP_001583289.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121917530|gb|EAY22303.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 499 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 40/162 (24%), Gaps = 28/162 (17%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 CG C + +G +C + + P + + + + + I K Sbjct: 53 CGLCRVIANGKKEFSCNTRITEGMVINTQDP----GIKRSNIKKVQRMAMKDEDIANAYK 108 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + K+ C+ C C CP+ +L Sbjct: 109 MIQDPTRKQTHIDITTGSIQLNHAACIDCYKCVDICPTGALTHGNHLQTFGHFGL----- 163 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP-KGLNPAK 245 RD C + C CP K ++ Sbjct: 164 --RDS----------------GCVSCGACVDVCPTKAISVTD 187 >gi|126173591|ref|YP_001049740.1| FAD linked oxidase domain-containing protein [Shewanella baltica OS155] gi|125996796|gb|ABN60871.1| FAD linked oxidase domain protein [Shewanella baltica OS155] Length = 934 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|329118908|ref|ZP_08247603.1| NADH-quinone oxidoreductase subunit I [Neisseria bacilliformis ATCC BAA-1200] gi|327464936|gb|EGF11226.1| NADH-quinone oxidoreductase subunit I [Neisseria bacilliformis ATCC BAA-1200] Length = 159 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTTRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|320103709|ref|YP_004179300.1| NAD-dependent formate dehydrogenase catalytic subunit [Isosphaera pallida ATCC 43644] gi|319750991|gb|ADV62751.1| NAD-dependent formate dehydrogenase iron-sulfur protein [Isosphaera pallida ATCC 43644] Length = 986 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 50/175 (28%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIK--------------GAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G LA K A+ L +D Sbjct: 112 DGNCRACVVEIEGERVLAASCIRKPTPGMVVHTQSDRAARARAMVFELLLADQPPRDQAH 171 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 + + + + + P + + + L C+ C C +C Sbjct: 172 NPNSSFHRWAQRLGVTTSRFPARDETAIPPPDRSHPAMAVHLDSCIQCGLCVRACREVQV 231 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A R + D +DP C C Q+CP G Sbjct: 232 ND--VIGLAHRGYQTRVVFD------------FDDPMGQSSCVGCGECVQACPTG 272 >gi|283471529|emb|CAQ50740.1| molybdopterin oxidoreductase family protein [Staphylococcus aureus subsp. aureus ST398] Length = 984 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|329730472|gb|EGG66862.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus 21193] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDVWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|307247153|ref|ZP_07529205.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856402|gb|EFM88553.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 684 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|282926858|ref|ZP_06334485.1| formate dehydrogenase [Staphylococcus aureus A10102] gi|282591309|gb|EFB96382.1| formate dehydrogenase [Staphylococcus aureus A10102] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|253734280|ref|ZP_04868445.1| formate dehydrogenase family protein [Staphylococcus aureus subsp. aureus TCH130] gi|253727696|gb|EES96425.1| formate dehydrogenase family protein [Staphylococcus aureus subsp. aureus TCH130] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|120599632|ref|YP_964206.1| FAD linked oxidase domain-containing protein [Shewanella sp. W3-18-1] gi|146292374|ref|YP_001182798.1| FAD linked oxidase domain-containing protein [Shewanella putrefaciens CN-32] gi|120559725|gb|ABM25652.1| FAD linked oxidase domain protein [Shewanella sp. W3-18-1] gi|145564064|gb|ABP74999.1| FAD linked oxidase domain protein [Shewanella putrefaciens CN-32] gi|319425674|gb|ADV53748.1| respiratory FAD-dependent D-lactate dehydrogenase, Dld [Shewanella putrefaciens 200] Length = 934 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ + Sbjct: 536 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAEMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 595 VDTCAACQLCTIACPVDNSMGQLVRKLR 622 >gi|327399274|ref|YP_004340143.1| hypothetical protein Hipma_1118 [Hippea maritima DSM 10411] gi|327181903|gb|AEA34084.1| protein of unknown function DUF224 cysteine-rich region domain protein [Hippea maritima DSM 10411] Length = 414 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 D++ CV C C + CP + + LI +F + Sbjct: 1 MDKRLFKEWESCVKCGICRSVCPVFKEEKSEPYVARGHITLLSELIKGNIDFSEK----- 55 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI-KMMLLDR 257 E LY+C C +SCP + I +I + ++ + Sbjct: 56 EAKDYLYKCLLCTTCVESCPND-SHTDTIVEIARHEVIKK 94 >gi|307249377|ref|ZP_07531370.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858599|gb|EFM90662.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 645 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|302562195|ref|ZP_07314537.1| oxidoreductase, FAD-binding [Streptomyces griseoflavus Tu4000] gi|302479813|gb|EFL42906.1| oxidoreductase, FAD-binding [Streptomyces griseoflavus Tu4000] Length = 1029 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 31/116 (26%), Gaps = 9/116 (7%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----CPSYWWNS 187 R W V +D + CV C + CPSY Sbjct: 523 DENLRLGPLWRPRVDRTEFGY---PEDDHSFTRAVMRCVGIGNCRSHEGGVMCPSYRATG 579 Query: 188 DRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++ D + + E L C + C CP G++ Sbjct: 580 EEEHSTRGRSRLLFEMLGGHADSAVTDGWRSTEVKDALDLCLSCKGCKSDCPVGVD 635 >gi|302333942|gb|ADL24135.1| molybdopterin oxidoreductase [Staphylococcus aureus subsp. aureus JKD6159] gi|323443733|gb|EGB01346.1| formate dehydrogenase alpha subunit [Staphylococcus aureus O46] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|188533914|ref|YP_001907711.1| Electron transport complex protein [Erwinia tasmaniensis Et1/99] gi|226735445|sp|B2VEQ3|RNFC_ERWT9 RecName: Full=Electron transport complex protein rnfC gi|188028956|emb|CAO96822.1| Electron transport complex protein [Erwinia tasmaniensis Et1/99] Length = 804 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ A+L Q W D + + C Sbjct: 377 CIRCSACADACPA-----------ALLPQQLYWYSRGGDHDKAR-------AHNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 419 CGACAYVCPSNIPLVQ 434 >gi|323702588|ref|ZP_08114250.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532407|gb|EGB22284.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] Length = 464 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSR-----DE 209 R + C C C+ +C +Y D Y P R + + R Sbjct: 48 RSLMITFESCTKCGACAENCHTYLGTRDPYNIPTNRADLLRKVYKRYFTPEGRFLGRFIG 107 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + L++LE F Y C+ C+ CP GL+ + + +L Sbjct: 108 AKDLELEDLEKMFSYYYQCNECRRCSLVCPFGLDTCEVTMAGRQLL 153 >gi|311279508|ref|YP_003941739.1| electron transport complex, RnfABCDGE type, C subunit [Enterobacter cloacae SCF1] gi|308748703|gb|ADO48455.1| electron transport complex, RnfABCDGE type, C subunit [Enterobacter cloacae SCF1] Length = 679 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 25/101 (24%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Q Sbjct: 367 EMGEPQDEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKAQT------- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMM 253 L C C CP + + IA I+ Sbjct: 411 --HNLSDCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|295106621|emb|CBL04164.1| Fe-S oxidoreductase [Gordonibacter pamelaeae 7-10-1-b] Length = 539 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 14/100 (14%) Query: 167 LYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP---- 221 + C C CS +C Y N D P + R L G+ L +L Sbjct: 105 MEYCAKCNTCSEACHVYKAANGDEIYRPIFRVDVLRKLYKKYFTRSGKLLGSLTGADIDL 164 Query: 222 ---------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 YRC+ C Q CP GL+ A +I+ Sbjct: 165 DWETIARLGESAYRCNLCRRCAQVCPMGLDNGMAAREIRK 204 >gi|294636370|ref|ZP_06714759.1| electron transport complex protein RnfC [Edwardsiella tarda ATCC 23685] gi|291090358|gb|EFE22919.1| electron transport complex protein RnfC [Edwardsiella tarda ATCC 23685] Length = 576 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 23/95 (24%), Gaps = 18/95 (18%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 L S ++ C+ C+ C+ CP Y D+ Sbjct: 359 NCILAPSRDEFSAPQEEQPCIRCSSCADVCPVRLLPQQLYWYSRG---------QEHDKA 409 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L C C CP + + Sbjct: 410 RSHHLQE---------CIECGACAYVCPSNIPLVQ 435 >gi|260587819|ref|ZP_05853732.1| Na(+)-translocating NADH-quinone reductase, A subunit [Blautia hansenii DSM 20583] gi|260542084|gb|EEX22653.1| Na(+)-translocating NADH-quinone reductase, A subunit [Blautia hansenii DSM 20583] Length = 440 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 ED + C+ C C ++CP+ S + + R + Sbjct: 353 MSEDEVSENEPTACINCGRCVSACPARLVPS----------RLATYSEHGR--------E 394 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L + C C+ +CP +++ ++ M+L + Sbjct: 395 DLFVKYNGMECVECGCCSFACPAKRPLTQSMRSMRKMVLANR 436 >gi|225387470|ref|ZP_03757234.1| hypothetical protein CLOSTASPAR_01223 [Clostridium asparagiforme DSM 15981] gi|225046400|gb|EEG56646.1| hypothetical protein CLOSTASPAR_01223 [Clostridium asparagiforme DSM 15981] Length = 347 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 21/135 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + ++ E+L+ + + C+ C C+ CP+ R Sbjct: 207 EKLPYSNISLETFKNTEMLELFNSPKWEELYKACLACGTCTFICPTCQCYDIRDYNTGNG 266 Query: 197 LQAYR-----------WLIDS------RDEFQGERLDNL----EDPFRLYRCHTIMNCTQ 235 +Q +R + ++ F+ + L E+ ++ C C Sbjct: 267 IQRFRCWDSCMYSDFTLMAHGNIRNSQKERFRQRFMHKLVYFPENNDGMFSCVGCGRCVS 326 Query: 236 SCPKGLNPAKAIAKI 250 CP LN K I + Sbjct: 327 KCPSSLNIVKVIKSL 341 >gi|86159395|ref|YP_466180.1| FAD linked oxidase-like [Anaeromyxobacter dehalogenans 2CP-C] gi|85775906|gb|ABC82743.1| FAD linked oxidase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 955 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 30/108 (27%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + P L L C+ C C CPS + R + Sbjct: 520 NDDPQAHLRHLKALPHAHPILDRCIECGFCEPRCPSRDLTLTPRQRIVAQREIARLRVTG 579 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D +RL+ C C +CP G++ + ++ Sbjct: 580 EDPAALDRLERDYVYLGEQTCAVDGLCATACPVGIDTGEHTKWLRAQA 627 >gi|148263625|ref|YP_001230331.1| hypothetical protein Gura_1562 [Geobacter uraniireducens Rf4] gi|146397125|gb|ABQ25758.1| protein of unknown function DUF224, cysteine-rich region domain protein [Geobacter uraniireducens Rf4] Length = 623 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 17/120 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+ L+ Q C C C C +Y P Sbjct: 7 IKKKQDITMSIITNNHLRPGLQEQIAATKSGCTNCGECVREC----AFLKKYGTPKS--- 59 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + DS D + L R + C C+ CP+ L+ +++ +DR Sbjct: 60 ----IADSFDAIDPKSLA------RSFECSLCGLCSVVCPEQLDLDGLFLEMRREAVDRG 109 >gi|328948187|ref|YP_004365524.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Treponema succinifaciens DSM 2489] gi|328448511|gb|AEB14227.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Treponema succinifaciens DSM 2489] Length = 345 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 21/146 (14%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + + +S K++L+ + CV C C+ CP+ Sbjct: 196 CRKDIAEKVEKLPFAHLDLSKFQGKDMLKIFNSKIWDKVSEPCVGCGTCTYVCPTCMCFD 255 Query: 188 DRYLGPAILLQAYR-----WLID--------SRDEFQGERLDNLEDP--------FRLYR 226 R + ++ R D R + ++ Sbjct: 256 VRDFATSNGVRQIRCWDSCMYNDFTQMAAENPRHTQKERSRQRFMHKLMYYPMAHDGMFS 315 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKM 252 C C ++CP +N K I + Sbjct: 316 CVGCGRCVENCPVNMNIVKVIKAVNE 341 >gi|328948186|ref|YP_004365523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] gi|328448510|gb|AEB14226.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] Length = 320 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 6/83 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C CP+ + A + E L ++ Sbjct: 190 FWRNEFSRCIRCNACRNVCPACTCEKCVFDN-----NALYTTQKVAETSFEESLFHIIRA 244 Query: 222 FRL-YRCHTIMNCTQSCPKGLNP 243 + + RC C++ CP+ + Sbjct: 245 WHVAGRCTDCGECSRVCPQNIPL 267 >gi|255322052|ref|ZP_05363200.1| iron-sulfur cluster-binding domain protein [Campylobacter showae RM3277] gi|255300865|gb|EET80134.1| iron-sulfur cluster-binding domain protein [Campylobacter showae RM3277] Length = 417 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 8/98 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + +CV C C C + NSD P +D ++ L + Sbjct: 2 FKFSEISDKCVKCGKCIQVCTIHKINSDETTSPRGF-------LDLVGAYERGELKLDKS 54 Query: 221 PFRLY-RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ C +C + CP L AI ++ + D+ Sbjct: 55 AKNIFESCFLCTSCVEVCPNSLRVDTAIENVRRDIADK 92 >gi|238023170|ref|ZP_04603596.1| hypothetical protein GCWU000324_03096 [Kingella oralis ATCC 51147] gi|237865553|gb|EEP66693.1| hypothetical protein GCWU000324_03096 [Kingella oralis ATCC 51147] Length = 159 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTTRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|226942021|ref|YP_002797095.1| (S)-2-hydroxy-acid oxidase [Laribacter hongkongensis HLHK9] gi|226716948|gb|ACO76086.1| Probable (S)-2-hydroxy-acid oxidase [Laribacter hongkongensis HLHK9] Length = 1282 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R D L D Sbjct: 817 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSFRHFDELSDV 876 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP ++ ++ L Sbjct: 877 --ADHCTVCHRCVKPCPVKIDFGDVSVAMRNFL 907 >gi|332529960|ref|ZP_08405910.1| fad linked oxidase domain protein [Hylemonella gracilis ATCC 19624] gi|332040433|gb|EGI76809.1| fad linked oxidase domain protein [Hylemonella gracilis ATCC 19624] Length = 1312 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 15/147 (10%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECVMCA 174 L H+ V +D + + + + L+ D D + +C+ C Sbjct: 793 LRHLPVAQD-----DEDMHAADLSQAYTPSFGLMGHESLIMQQSDIGAISDSIKDCLRCG 847 Query: 175 CCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C ++ + ++ L ++L++A+ + +R + ED C Sbjct: 848 KCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV--ADHC 905 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C CP ++ ++ +L Sbjct: 906 TVCHKCESPCPVKIDFGDVTMNMRNLL 932 >gi|331083821|ref|ZP_08332930.1| hypothetical protein HMPREF0992_01854 [Lachnospiraceae bacterium 6_1_63FAA] gi|330403246|gb|EGG82806.1| hypothetical protein HMPREF0992_01854 [Lachnospiraceae bacterium 6_1_63FAA] Length = 440 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 ED + C+ C C ++CP+ S + + R + Sbjct: 353 MSEDEVSENEPTACINCGRCVSACPARLVPS----------RLATYSEHGR--------E 394 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L + C C+ +CP +++ ++ M+L + Sbjct: 395 DLFVKYNGMECVECGCCSFACPAKRPLTQSMRSMRKMVLANR 436 >gi|146292946|ref|YP_001183370.1| electron transport complex protein RnfC [Shewanella putrefaciens CN-32] gi|145564636|gb|ABP75571.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella putrefaciens CN-32] Length = 793 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 40/152 (26%), Gaps = 25/152 (16%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L ++ + P + + ++ + Sbjct: 310 GNYWLPIGTPVEHVLMQTEFKPESEQKI-----IVGGPMMGH--ALPTINVPILKGTNCI 362 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L+ S+++ C+ C C+ CP+ L P L + E Sbjct: 363 LVPSNQEIGVTPEEKACIRCGECANVCPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D F L C C+ CP + + Sbjct: 406 EYDKAA-SFNLKDCIECGCCSYVCPSDIPLVE 436 >gi|78186970|ref|YP_375013.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium luteolum DSM 273] gi|78166872|gb|ABB23970.1| heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C [Chlorobium luteolum DSM 273] Length = 502 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 13/90 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ CP+ + + R + Q ++ L+ Sbjct: 24 FNSCYQCGKCTAGCPAGNLMDNP------PTRIMRLV-------QAGMVEEALRSDALWY 70 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C M CT CP+ ++ A + ++ + L Sbjct: 71 CVGCMTCTSRCPQNMDIAGTMDALRSIALR 100 >gi|258423682|ref|ZP_05686569.1| formate dehydrogenase alpha subunit [Staphylococcus aureus A9635] gi|257846074|gb|EEV70101.1| formate dehydrogenase alpha subunit [Staphylococcus aureus A9635] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|134300675|ref|YP_001114171.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Desulfotomaculum reducens MI-1] gi|134053375|gb|ABO51346.1| glycerol 3-phosphate dehydrogenase (quinone) subunit C [Desulfotomaculum reducens MI-1] Length = 396 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 12/78 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLY 225 L C+ C+ C + CP D++ GP + + + RL+ + Sbjct: 9 LDNCIKCSICVSHCPVARVT-DKFAGPK----------QNGPDLERFRLEEPAAVHPSIG 57 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 58 YCSNCKTCDVVCPSGVSI 75 >gi|331683136|ref|ZP_08383737.1| electron transport complex protein RnfC [Escherichia coli H299] gi|331079351|gb|EGI50548.1| electron transport complex protein RnfC [Escherichia coli H299] Length = 624 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 376 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 418 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|255526566|ref|ZP_05393474.1| aldo/keto reductase [Clostridium carboxidivorans P7] gi|296187544|ref|ZP_06855939.1| oxidoreductase, aldo/keto reductase family protein [Clostridium carboxidivorans P7] gi|255509751|gb|EET86083.1| aldo/keto reductase [Clostridium carboxidivorans P7] gi|296048066|gb|EFG87505.1| oxidoreductase, aldo/keto reductase family protein [Clostridium carboxidivorans P7] Length = 375 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 33/130 (25%), Gaps = 8/130 (6%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + +M ++ + + + + C CA C CP Sbjct: 251 MSNMEQIEDNISYMKNFEPLTEKEYEI--INKAQMALNAISSIPCTSCAYCMKGCPQSIA 308 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + + + L + C C CP+ + K Sbjct: 309 IPGIF---KSMNMINIYNNEQAAKGSYAWNTKLSNLNGASDCIECGQCESVCPQHI---K 362 Query: 246 AIAKIKMMLL 255 I ++K Sbjct: 363 IIDELKKAAA 372 >gi|83312454|ref|YP_422718.1| protein rdxB [Magnetospirillum magneticum AMB-1] gi|82947295|dbj|BAE52159.1| Protein rdxB [Magnetospirillum magneticum AMB-1] Length = 481 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 12/152 (7%) Query: 92 IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 D A K + I + + L + R I + + A Sbjct: 146 FDRAPLSAGKLAKKALVNVIWLAIAAACGIGFTL--YFGDAFEMLRDIFTGQASTATYGA 203 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ L C CP + S + ++++ W ++R Sbjct: 204 IAVVGGLC-----FLLAGYAREQVCIYMCPYARFQSAMFDEHSLIISYEAWRGEARGPAP 258 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R D C + C Q+CP G++ Sbjct: 259 ANR-----DFTGRGHCVDCLACVQACPTGIDI 285 >gi|261880457|ref|ZP_06006884.1| electron transport complex [Prevotella bergensis DSM 17361] gi|270332796|gb|EFA43582.1| electron transport complex [Prevotella bergensis DSM 17361] Length = 449 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + C+ C C T CP + YL + + +RL+ Sbjct: 363 DDARRKVIQPCIRCGKCVTVCP---MGLEPYLIATLSSLH-----------KYDRLE--- 405 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C + +C +CP I + K ++ Sbjct: 406 -KEDVTSCISCGSCQYTCPSHRPLLDNIIQGKAAVM 440 >gi|260597797|ref|YP_003210368.1| electron transport complex protein RnfC [Cronobacter turicensis z3032] gi|260216974|emb|CBA30618.1| Electron transport complex protein rnfC [Cronobacter turicensis z3032] Length = 849 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ L C Sbjct: 376 HCIRCSACADACPADLLPQQLYWFSVG---------QQHDKATAHNLA---------DCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|163736025|ref|ZP_02143450.1| formate dehydrogenase, alpha subunit [Roseobacter litoralis Och 149] gi|161390692|gb|EDQ15036.1| formate dehydrogenase, alpha subunit [Roseobacter litoralis Och 149] Length = 921 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIK--------------GAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G TLA + + + + L +D+ Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPSEGMVVTTNSARAESARKMVIEMLVADQPEQDVAH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S + ++ PK + + +D L C+ C C +C Sbjct: 107 DKSSHLWDMAAHSGVQESRFPKLEEGRIPLLDDSHVAMSVNLDACIQCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDSYPTFD------------MADPMGDSTCVACGECVQACPTG 207 >gi|94498904|ref|ZP_01305442.1| electron transport complex protein RnfC [Oceanobacter sp. RED65] gi|94428536|gb|EAT13508.1| electron transport complex protein RnfC [Oceanobacter sp. RED65] Length = 727 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 33/148 (22%), Gaps = 28/148 (18%) Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 L V L + F HR I E+ I Sbjct: 305 NNKANFETLLGTPVHHLLEQGETDFDKVHRLIMGGPMMGFTLQTDEVPVVKSTNCIIAST 364 Query: 168 Y----------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C+ C C+ +CP+ Q Y + S E + Sbjct: 365 ANELPDPAMEQPCIRCGMCTEACPAQLLPQ----------QLYWFSKSSNLEQAEQ---- 410 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP + + Sbjct: 411 ----HNIADCIECGACAYVCPSNIPLVQ 434 >gi|319638825|ref|ZP_07993583.1| NADH-quinone oxidoreductase subunit I [Neisseria mucosa C102] gi|317399729|gb|EFV80392.1| NADH-quinone oxidoreductase subunit I [Neisseria mucosa C102] Length = 159 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|301067068|ref|YP_003789091.1| iron-binding oxidase subunit [Lactobacillus casei str. Zhang] gi|300439475|gb|ADK19241.1| Iron-binding oxidase subunit [Lactobacillus casei str. Zhang] Length = 494 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHELLIKHREVMMDK 392 >gi|227533915|ref|ZP_03963964.1| iron-binding oxidase subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629931|ref|ZP_04672962.1| iron-binding oxidase subunit [Lactobacillus paracasei subsp. paracasei 8700:2] gi|227188477|gb|EEI68544.1| iron-binding oxidase subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527543|gb|EEQ66544.1| iron-binding oxidase subunit [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 494 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHELLIKHREVMMDK 392 >gi|221633149|ref|YP_002522374.1| glycolate oxidase subunit [Thermomicrobium roseum DSM 5159] gi|221156973|gb|ACM06100.1| glycolate oxidase subunit [Thermomicrobium roseum DSM 5159] Length = 979 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 34/122 (27%), Gaps = 10/122 (8%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + P K + D + + C C T CPSY D Sbjct: 540 RYGPDYRPLEPKTFFRFAHDGGFLRAIEMCNGAGVCRKLSTGTMCPSYMATRDERDTTRA 599 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R + R + L C + C CP ++ +A+IK L Sbjct: 600 RANVLRNALAGRI-LTPRHFTDPRTYEVLDLCLSCKACKTECPSSVD----MARIKSEFL 654 Query: 256 DR 257 + Sbjct: 655 AQ 656 >gi|254451326|ref|ZP_05064763.1| NAD-dependent formate dehydrogenase alpha subunit [Octadecabacter antarcticus 238] gi|198265732|gb|EDY90002.1| NAD-dependent formate dehydrogenase alpha subunit [Octadecabacter antarcticus 238] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKD--------------IKGAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G LA + + V L +D+ Sbjct: 47 DGNCRACMVEIEGERVLAASCIREPSEGMVVTTNNARAENARKMVVEMLLVDQPKRDVAH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S + ++ ++ PK + ++ L C+ C C +C Sbjct: 107 DKSSHFWDMAELQGVSESRFPKLEDGRIPLLDNSHVAMSVSLDACIQCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G + Q D L DP C C Q+CP G Sbjct: 167 ND--VIGMSGRGQDSYPTFD------------LADPMGDSTCVACGECVQACPTG 207 >gi|191639010|ref|YP_001988176.1| Iron-binding oxidase subunit [Lactobacillus casei BL23] gi|190713312|emb|CAQ67318.1| Iron-binding oxidase subunit [Lactobacillus casei BL23] gi|327383066|gb|AEA54542.1| Iron-sulfur cluster binding protein [Lactobacillus casei LC2W] gi|327386250|gb|AEA57724.1| Iron-sulfur cluster binding protein [Lactobacillus casei BD-II] Length = 494 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHELLIKHREVMMDK 392 >gi|169832328|ref|YP_001718310.1| hypothetical protein Daud_2191 [Candidatus Desulforudis audaxviator MP104C] gi|169639172|gb|ACA60678.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 461 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 12/112 (10%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LI 204 H+ R + + CV C C+ +C +Y D PA R L Sbjct: 42 FRHKVRSFVMAMESCVKCGACAENCHTYLGTRDPNNIPAGRADLIRKVYKRHFTVQGKLF 101 Query: 205 DSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 Q L+ +E F Y C C CP G++ A+ + +L Sbjct: 102 PGLVGAQDLDLETIEKWFSYYYQCSECRRCAHVCPFGIDTAEVTMIGRQILF 153 >gi|303248952|ref|ZP_07335199.1| Hme subunit D [Desulfovibrio fructosovorans JJ] gi|302489675|gb|EFL49611.1| Hme subunit D [Desulfovibrio fructosovorans JJ] Length = 537 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 16/139 (11%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 S + W + V K ++L + R + CV C C+ C + D Sbjct: 54 WSPMDEDWKLPPDWKRIVMEKFREKLKKY---RSFKIFMDVCVRCGACADKCHFFIGGGD 110 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP------------FRLYRCHTIMNCTQS 236 P + + R + + L L Y+C C+ Sbjct: 111 PKNMPVLRAELLRSIYRGEFSTAAKVLGKLAGARKLEEDVVKEWFMYFYQCTECRRCSLF 170 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP G++ A+ I + LL Sbjct: 171 CPYGIDTAE-ITMMARELL 188 >gi|301059304|ref|ZP_07200231.1| dehydrogenase, beta subunit family protein [delta proteobacterium NaphS2] gi|300446533|gb|EFK10371.1| dehydrogenase, beta subunit family protein [delta proteobacterium NaphS2] Length = 316 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C SCP + + ++ + + + D D L Sbjct: 198 FFQRLISRCIRCYACRNSCPLCYCPTC-FVDESEPQWVGKSI-DPTDTLTFHFLRAY--- 252 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 RC C + CP G++ + K+ Sbjct: 253 HCAGRCTDCGACERVCPMGISMRQFTKKLNKD 284 >gi|289449574|ref|YP_003475793.1| putative electron transport complex protein RnfC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184121|gb|ADC90546.1| putative electron transport complex protein RnfC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 449 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 21/105 (20%), Gaps = 25/105 (23%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E +C+ C CS CP A Sbjct: 363 LFFSERMVNNGPETDCIRCGRCSQHCPMNLLPKRIMDTVKFQKYAAL------------- 409 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-------KAIAKIKM 252 + C +C CP + I K K Sbjct: 410 -----SATGVMNCIECGSCAYECPAHIPLVQYMKLSKDFIKKGKR 449 >gi|226944038|ref|YP_002799111.1| electron transport complex protein RnfC [Azotobacter vinelandii DJ] gi|226718965|gb|ACO78136.1| Electron transport complex, subunit C [Azotobacter vinelandii DJ] Length = 688 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 22/102 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ CP+ ++L Q + R+ Q Sbjct: 361 ELPPPPPALPCIRCGACADVCPA-----------SLLPQQLHFFALGREHEQLR------ 403 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----AIAKIKMMLLDR 257 + L+ C C CP L + A A+I+ + R Sbjct: 404 -AYNLFDCIECGACAYVCPSSLPLVQYYRVAKAEIRELEQKR 444 >gi|86140148|ref|ZP_01058710.1| formate dehydrogenase, alpha subunit [Roseobacter sp. MED193] gi|85823085|gb|EAQ43298.1| formate dehydrogenase, alpha subunit [Roseobacter sp. MED193] Length = 924 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 46/175 (26%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIK----GAIAVYPLPHMSVIKDLVV---------- 127 +G C +C + I+G TLA + ++ +L+V Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPFDGMVVTTNNARAEGARKMVMELLVADQPKQEEAH 106 Query: 128 -DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPSYWW 185 SH + + + L C+ C C +C Sbjct: 107 DKSSHLWDMAELNGVSESRFPKLEEGRIPLLDDSHVAMSVNLDACISCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + D C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPVFD------------IADDMGASSCVACGECVQACPTG 207 >gi|116495529|ref|YP_807263.1| Iron-binding oxidase subunit [Lactobacillus casei ATCC 334] gi|116105679|gb|ABJ70821.1| Iron-binding oxidase subunit [Lactobacillus casei ATCC 334] Length = 494 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHELLIKHREVMMDK 392 >gi|23015196|ref|ZP_00054979.1| COG0348: Polyferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 481 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 44/152 (28%), Gaps = 12/152 (7%) Query: 92 IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 D A K + AI + + L + R I + + A Sbjct: 146 FDRAPLSAGKLARKALVNAIWLSIAAACGIGFTL--YFGDAFEMLRDIFSGEASTATYGA 203 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 ++ L C CP + S + ++++ W ++R Sbjct: 204 IAVVGGMC-----FLLAGYAREQVCIYMCPYARFQSAMFDEHSLIISYEAWRGETRGPAP 258 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R D C + C Q+CP G++ Sbjct: 259 ASR-----DFTGRGHCVDCLACVQACPTGIDI 285 >gi|256762117|ref|ZP_05502697.1| iron-binding oxidase subunit [Enterococcus faecalis T3] gi|256683368|gb|EEU23063.1| iron-binding oxidase subunit [Enterococcus faecalis T3] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|304317218|ref|YP_003852363.1| ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778720|gb|ADL69279.1| Ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 504 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 19/119 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + S DR+ +C+ C C +CP + + L P I A + + Sbjct: 112 HRCTEVCPKGAISIIDRKSHIDYDKCIECGRCKEACPYNAISDN--LRPCIRSCAAKAI- 168 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 E L + + C + CT +CP G ++ +AI K + Sbjct: 169 -----TMDEELKASINYEK---CTSCGACTLACPFGAITDKSYIVDIIRAIKSGKKVYA 219 >gi|229546212|ref|ZP_04434937.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1322] gi|229550397|ref|ZP_04439122.1| iron-sulfur cluster-binding protein [Enterococcus faecalis ATCC 29200] gi|255973168|ref|ZP_05423754.1| iron-binding oxidase subunit [Enterococcus faecalis T1] gi|256965490|ref|ZP_05569661.1| iron-binding oxidase subunit [Enterococcus faecalis HIP11704] gi|257422974|ref|ZP_05599964.1| iron-sulfur cluster binding protein [Enterococcus faecalis X98] gi|300859639|ref|ZP_07105727.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TUSoD Ef11] gi|307273800|ref|ZP_07555022.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0855] gi|307274589|ref|ZP_07555769.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX2134] gi|307291092|ref|ZP_07570977.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0411] gi|312899584|ref|ZP_07758910.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0470] gi|312951361|ref|ZP_07770259.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0102] gi|229304519|gb|EEN70515.1| iron-sulfur cluster-binding protein [Enterococcus faecalis ATCC 29200] gi|229308736|gb|EEN74723.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1322] gi|255964186|gb|EET96662.1| iron-binding oxidase subunit [Enterococcus faecalis T1] gi|256955986|gb|EEU72618.1| iron-binding oxidase subunit [Enterococcus faecalis HIP11704] gi|257164798|gb|EEU94758.1| iron-sulfur cluster binding protein [Enterococcus faecalis X98] gi|300850457|gb|EFK78206.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TUSoD Ef11] gi|306497746|gb|EFM67278.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0411] gi|306508741|gb|EFM77831.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX2134] gi|306509485|gb|EFM78533.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0855] gi|310630621|gb|EFQ13904.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0102] gi|311293263|gb|EFQ71819.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0470] gi|315030725|gb|EFT42657.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX4000] gi|315153687|gb|EFT97703.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0031] gi|315156550|gb|EFU00567.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0043] gi|315158293|gb|EFU02310.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0312] gi|323480347|gb|ADX79786.1| iron-sulfur cluster binding protein [Enterococcus faecalis 62] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|257423792|ref|ZP_05600221.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257426472|ref|ZP_05602874.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257429111|ref|ZP_05605498.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus 68-397] gi|257431757|ref|ZP_05608120.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus E1410] gi|257434717|ref|ZP_05610768.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282902216|ref|ZP_06310109.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|282906650|ref|ZP_06314498.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909625|ref|ZP_06317434.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911870|ref|ZP_06319666.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282915163|ref|ZP_06322940.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282920889|ref|ZP_06328607.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus C427] gi|282925795|ref|ZP_06333443.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus C101] gi|283959090|ref|ZP_06376531.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|293497563|ref|ZP_06665417.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus 58-424] gi|293511140|ref|ZP_06669837.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus M809] gi|293549747|ref|ZP_06672419.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|297589619|ref|ZP_06948260.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|257272810|gb|EEV04912.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257276103|gb|EEV07554.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257279592|gb|EEV10179.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus 68-397] gi|257282636|gb|EEV12768.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus E1410] gi|257285313|gb|EEV15429.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282312624|gb|EFB43028.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus C101] gi|282315304|gb|EFB45688.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus C427] gi|282320884|gb|EFB51218.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282323566|gb|EFB53882.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282326199|gb|EFB56503.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329549|gb|EFB59070.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596675|gb|EFC01634.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|283788682|gb|EFC27509.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|290918794|gb|EFD95870.1| formate dehydrogenase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|291096494|gb|EFE26752.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus 58-424] gi|291466127|gb|EFF08656.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus M809] gi|297578130|gb|EFH96843.1| formate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|312437277|gb|ADQ76348.1| NAD-dependent formate dehydrogenase [Staphylococcus aureus subsp. aureus TCH60] gi|315193569|gb|EFU23965.1| putative bifunctional protein [Staphylococcus aureus subsp. aureus CGS00] Length = 984 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|149374944|ref|ZP_01892717.1| formate dehydrogenase, alpha subunit [Marinobacter algicola DG893] gi|149360833|gb|EDM49284.1| formate dehydrogenase, alpha subunit [Marinobacter algicola DG893] Length = 956 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 15/86 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C + +G A A + + D +DP Sbjct: 168 MNVNLDACITCGLCERAC--REVQGNDVIGLAHRGAASKVIFD------------FDDPM 213 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAI 247 C C Q+CP G L PA I Sbjct: 214 GDSTCVACGECVQACPTGALMPATLI 239 >gi|89894810|ref|YP_518297.1| hypothetical protein DSY2064 [Desulfitobacterium hafniense Y51] gi|89334258|dbj|BAE83853.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 978 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 20/146 (13%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ---------KIDGLYECVMCACCSTSC 180 S Y + I+ + ++ +++ D + C C C C Sbjct: 524 SKAYELMKRIKSAFDPHNLLNPGVIINDNKNVYLENLKAMPASHDTIDRCTNCGFCQDIC 583 Query: 181 PSYWWNSDRYLGPAILLQAYRWLID----SRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 PS + P + + R + D RD + RL D C T C S Sbjct: 584 PSKHLTTT----PRMRIILQREISDLKRTGRDPQRLMRLLRDYDYAGNATCATDGLCATS 639 Query: 237 CPKGLNPAKAIAKIKMMLL---DRKI 259 CP +N ++ + RK+ Sbjct: 640 CPLNINTGDNTKYLRSRAITPATRKV 665 >gi|326623243|gb|EGE29588.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|323259117|gb|EGA42763.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 1006 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 504 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 562 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 563 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 614 >gi|323204140|gb|EFZ89153.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] Length = 1039 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 537 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 595 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 596 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 647 >gi|322614901|gb|EFY11826.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619341|gb|EFY16221.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623153|gb|EFY19995.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628443|gb|EFY25231.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634850|gb|EFY31581.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638585|gb|EFY35280.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641026|gb|EFY37673.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645391|gb|EFY41919.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651724|gb|EFY48096.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654376|gb|EFY50698.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661216|gb|EFY57442.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662655|gb|EFY58862.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667734|gb|EFY63894.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671854|gb|EFY67975.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677101|gb|EFY73165.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680237|gb|EFY76276.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685334|gb|EFY81330.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194303|gb|EFZ79499.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199393|gb|EFZ84487.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205853|gb|EFZ90816.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213895|gb|EFZ98666.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217181|gb|EGA01902.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220071|gb|EGA04539.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227259|gb|EGA11429.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232042|gb|EGA16149.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234569|gb|EGA18656.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238022|gb|EGA22081.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243377|gb|EGA27396.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246183|gb|EGA30168.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253685|gb|EGA37512.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323260415|gb|EGA44028.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266498|gb|EGA49985.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271222|gb|EGA54649.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|315174628|gb|EFU18645.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1346] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|306819984|ref|ZP_07453635.1| Na(+)-translocating NADH-quinone reductase subunit A [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552020|gb|EFM39960.1| Na(+)-translocating NADH-quinone reductase subunit A [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 448 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 E ID + C+ CA C CP+ +L P + + AY D + E Sbjct: 354 FTEKEAHIDDMQNCIRCAKCVGVCPA-------FLEP-VYISAYSL---KDDFEKAEEYR 402 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C +C+ CP ++I K +L + Sbjct: 403 ALD-------CIECGSCSFICPSKRPLLQSIRVAKREILANR 437 >gi|283853035|ref|ZP_06370292.1| heterodisulfide reductase, C subunit [Desulfovibrio sp. FW1012B] gi|283571572|gb|EFC19575.1| heterodisulfide reductase, C subunit [Desulfovibrio sp. FW1012B] Length = 186 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 13/103 (12%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + + C C C+ CP ++ + Q R L + Sbjct: 16 HRVEEESGQNVSLCYQCGNCTAGCP------YTFVYDIPVSQIMRLLQAGQ-------KK 62 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ C T +CT CP ++ A+ + ++ M + Sbjct: 63 TVLSCKSIWLCATCESCTTRCPNNIDVARVMDVLRHMARREGL 105 >gi|257415723|ref|ZP_05592717.1| iron-binding oxidase subunit [Enterococcus faecalis AR01/DG] gi|257157551|gb|EEU87511.1| iron-binding oxidase subunit [Enterococcus faecalis ARO1/DG] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|256852759|ref|ZP_05558129.1| iron-sulfur cluster binding protein [Enterococcus faecalis T8] gi|256711218|gb|EEU26256.1| iron-sulfur cluster binding protein [Enterococcus faecalis T8] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|238911964|ref|ZP_04655801.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 1204 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|268317678|ref|YP_003291397.1| FAD linked oxidase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335212|gb|ACY49009.1| FAD linked oxidase domain protein [Rhodothermus marinus DSM 4252] Length = 973 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 38/125 (30%), Gaps = 17/125 (13%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAI 195 T E L E+ + +C C CPSY D Sbjct: 539 RMGPTYHTIELIEELDWSEEGGFARAVEQCNGNGACRKLESGVMCPSYMVTRDERHTTRG 598 Query: 196 LLQAYRWLID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 A R ++ +E GE L + D C C CP ++ +A+IK Sbjct: 599 RANALRSVMSGALPVEELTGEALYEVMD-----LCVQCKGCKTECPSNVD----MARIKA 649 Query: 253 MLLDR 257 L + Sbjct: 650 EWLAK 654 >gi|227518362|ref|ZP_03948411.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0104] gi|227074194|gb|EEI12157.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0104] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|224583858|ref|YP_002637656.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468385|gb|ACN46215.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|213584020|ref|ZP_03365846.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 654 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 340 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 398 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 399 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 450 >gi|200389668|ref|ZP_03216279.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602113|gb|EDZ00659.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|170745440|ref|YP_001766897.1| formate dehydrogenase, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170659041|gb|ACB28095.1| formate dehydrogenase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 989 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 53/177 (29%), Gaps = 37/177 (20%) Query: 82 EGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G LA + + + V P + Sbjct: 112 DGNCRACMVEIEGERVLAASCKRTPAVGMKVKSATERATKARAMVLELLVADQPERATSH 171 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D SHF+ Q ++ SH L C+ C C +C Sbjct: 172 D---PTSHFWVQADFLDVSESRFPAAERWTGDFSHPA--MSVNLDACIQCNLCVRACREV 226 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N ++ AYR + + + +DP C C Q+CP G Sbjct: 227 QVND-------VIGMAYR-------SAGAKVVFDFDDPMGGSTCVACGECVQACPTG 269 >gi|168819450|ref|ZP_02831450.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343855|gb|EDZ30619.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085856|emb|CBY95631.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|194445273|ref|YP_002040899.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403936|gb|ACF64158.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|168241208|ref|ZP_02666140.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451230|ref|YP_002045691.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409534|gb|ACF69753.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339538|gb|EDZ26302.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|204927513|ref|ZP_03218714.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322855|gb|EDZ08051.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|197250474|ref|YP_002146381.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214177|gb|ACH51574.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|168235775|ref|ZP_02660833.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735236|ref|YP_002114676.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710738|gb|ACF89959.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290972|gb|EDY30325.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|168230073|ref|ZP_02655131.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469550|ref|ZP_03075534.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455914|gb|EDX44753.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335351|gb|EDZ22115.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|168462895|ref|ZP_02696826.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|198245539|ref|YP_002215497.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207856852|ref|YP_002243503.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|195633910|gb|EDX52262.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197940055|gb|ACH77388.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206708655|emb|CAR32980.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|167549865|ref|ZP_02343623.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325013|gb|EDZ12852.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|161613883|ref|YP_001587848.1| hypothetical protein SPAB_01620 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363247|gb|ABX67015.1| hypothetical protein SPAB_01620 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|78044475|ref|YP_360856.1| hypothetical protein CHY_2037 [Carboxydothermus hydrogenoformans Z-2901] gi|77996590|gb|ABB15489.1| cysteine-rich domain protein/FAD binding domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 1015 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 12/173 (6%) Query: 92 IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIK----DLVVDMSHFYSQHRSIEPWLKTVS 147 + + + K + V P + +K ++ + + + W + Sbjct: 421 ANEAPAVYGERLQKIKELKAKVDPDGLFNPLKLEGKGIINTIMSLANTFEGVARWFGNKA 480 Query: 148 PKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 E ++ Y C C C C Y P R +I Sbjct: 481 KPDLGEKFEAKNGIPGNVAWYAYACAQCGYCRNVCTLYDGRGWESASPRGKWSFIRKVI- 539 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E + + + D F L C T C C L + ++ L+ K Sbjct: 540 ---EGKAKFDQKMVDTFLL--CTTCEKCDFVCQLDLPIEPSWGVLRGDLVMEK 587 >gi|62180215|ref|YP_216632.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127848|gb|AAX65551.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714687|gb|EFZ06258.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|56413424|ref|YP_150499.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362347|ref|YP_002141984.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127681|gb|AAV77187.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093824|emb|CAR59307.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|29375685|ref|NP_814839.1| iron-sulfur cluster binding protein [Enterococcus faecalis V583] gi|227552893|ref|ZP_03982942.1| iron-sulfur cluster-binding protein [Enterococcus faecalis HH22] gi|256958606|ref|ZP_05562777.1| iron-binding oxidase subunit [Enterococcus faecalis DS5] gi|256962295|ref|ZP_05566466.1| iron-binding oxidase subunit [Enterococcus faecalis Merz96] gi|257078040|ref|ZP_05572401.1| iron-binding oxidase subunit [Enterococcus faecalis JH1] gi|257082928|ref|ZP_05577289.1| iron-binding oxidase subunit [Enterococcus faecalis E1Sol] gi|257085630|ref|ZP_05579991.1| iron-binding oxidase subunit [Enterococcus faecalis Fly1] gi|257418938|ref|ZP_05595932.1| iron-binding oxidase [Enterococcus faecalis T11] gi|293383324|ref|ZP_06629239.1| iron-sulfur cluster-binding protein [Enterococcus faecalis R712] gi|293387519|ref|ZP_06632068.1| iron-sulfur cluster-binding protein [Enterococcus faecalis S613] gi|294780980|ref|ZP_06746332.1| iron-sulfur cluster-binding protein [Enterococcus faecalis PC1.1] gi|307268777|ref|ZP_07550145.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX4248] gi|312905831|ref|ZP_07764851.1| iron-sulfur cluster-binding protein [Enterococcus faecalis DAPTO 512] gi|312909114|ref|ZP_07767973.1| iron-sulfur cluster-binding protein [Enterococcus faecalis DAPTO 516] gi|29343146|gb|AAO80909.1| iron-sulfur cluster binding protein [Enterococcus faecalis V583] gi|227177965|gb|EEI58937.1| iron-sulfur cluster-binding protein [Enterococcus faecalis HH22] gi|256949102|gb|EEU65734.1| iron-binding oxidase subunit [Enterococcus faecalis DS5] gi|256952791|gb|EEU69423.1| iron-binding oxidase subunit [Enterococcus faecalis Merz96] gi|256986070|gb|EEU73372.1| iron-binding oxidase subunit [Enterococcus faecalis JH1] gi|256990958|gb|EEU78260.1| iron-binding oxidase subunit [Enterococcus faecalis E1Sol] gi|256993660|gb|EEU80962.1| iron-binding oxidase subunit [Enterococcus faecalis Fly1] gi|257160766|gb|EEU90726.1| iron-binding oxidase [Enterococcus faecalis T11] gi|291079347|gb|EFE16711.1| iron-sulfur cluster-binding protein [Enterococcus faecalis R712] gi|291083029|gb|EFE19992.1| iron-sulfur cluster-binding protein [Enterococcus faecalis S613] gi|294451926|gb|EFG20376.1| iron-sulfur cluster-binding protein [Enterococcus faecalis PC1.1] gi|306514905|gb|EFM83452.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX4248] gi|310628170|gb|EFQ11453.1| iron-sulfur cluster-binding protein [Enterococcus faecalis DAPTO 512] gi|311290538|gb|EFQ69094.1| iron-sulfur cluster-binding protein [Enterococcus faecalis DAPTO 516] gi|315031587|gb|EFT43519.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0017] gi|315034971|gb|EFT46903.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0027] gi|315144622|gb|EFT88638.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX2141] gi|315148446|gb|EFT92462.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX4244] gi|315150320|gb|EFT94336.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0012] gi|315160947|gb|EFU04964.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0645] gi|315168377|gb|EFU12394.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1341] gi|315170960|gb|EFU14977.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1342] gi|315573701|gb|EFU85892.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0309B] gi|315582684|gb|EFU94875.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0309A] gi|327534740|gb|AEA93574.1| iron-sulfur cluster-binding protein [Enterococcus faecalis OG1RF] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|16760237|ref|NP_455854.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141994|ref|NP_805336.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213428539|ref|ZP_03361289.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289825696|ref|ZP_06544867.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25284487|pir||AH0663 probable pyruvate-flavodoxin oxidoreductase (EC 1.-.-.-) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502532|emb|CAD01681.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137623|gb|AAO69185.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 1174 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKV 782 >gi|296132459|ref|YP_003639706.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Thermincola sp. JR] gi|296133454|ref|YP_003640701.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Thermincola sp. JR] gi|296031037|gb|ADG81805.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Thermincola potens JR] gi|296032032|gb|ADG82800.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Thermincola potens JR] Length = 320 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 22/145 (15%) Query: 116 LPHMSVIKDLV----VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 H V+ D + V+++ + I+ + AK L+ C+ Sbjct: 161 ESHNPVVADHMLGDKVNVADVQDNYEEIKRIEAMSPEEKAKFWLR---------QFDRCI 211 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C CP + ++ + F R +L RC Sbjct: 212 RCYACRNICPGCSCRECIFDAIKPDWIGKEVNVEENEAFHLTRAFHLA-----GRCVDCG 266 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLD 256 C + CP + I+ + LL Sbjct: 267 ECDRVCPMDIP----ISLLNKKLLK 287 >gi|238618684|ref|YP_002913509.1| iron-sulfur protein, putative [Sulfolobus islandicus M.16.4] gi|238379753|gb|ACR40841.1| iron-sulfur protein, putative [Sulfolobus islandicus M.16.4] Length = 751 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 17/136 (12%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P + K+ V + ++ + K ++ ++ I +C+ C+ Sbjct: 257 PELFEYLKKNPDVLPFPYLKEYEEFHKDILRNFKKYEIKVRSKRINKNMIIEASKCINCS 316 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C SC +Y ++ P R+ +RL L C +C Sbjct: 317 LCLDSCLAYNTTNNILYSPLG-----RF----------DRL--LTGEGNFEFCFGCASCQ 359 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP G+N + + + Sbjct: 360 EACPVGINISNLMEIL 375 >gi|227826598|ref|YP_002828377.1| iron-sulfur protein [Sulfolobus islandicus M.14.25] gi|229583762|ref|YP_002842263.1| iron-sulfur protein [Sulfolobus islandicus M.16.27] gi|227458393|gb|ACP37079.1| iron-sulfur protein, putative [Sulfolobus islandicus M.14.25] gi|228018811|gb|ACP54218.1| iron-sulfur protein, putative [Sulfolobus islandicus M.16.27] Length = 751 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 17/136 (12%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P + K+ V + ++ + K ++ ++ I +C+ C+ Sbjct: 257 PELFEYLKKNPDVLPFPYLKEYEEFHKDILRNFKKYEIKVRSKRINKNMIIEASKCINCS 316 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C SC +Y ++ P R+ +RL L C +C Sbjct: 317 LCLDSCLAYNTTNNILYSPLG-----RF----------DRL--LTGEGNFEFCFGCASCQ 359 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP G+N + + + Sbjct: 360 EACPVGINISNLMEIL 375 >gi|257051449|ref|YP_003129282.1| protein of unknown function DUF162 [Halorhabdus utahensis DSM 12940] gi|256690212|gb|ACV10549.1| protein of unknown function DUF162 [Halorhabdus utahensis DSM 12940] Length = 738 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 10/91 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQG 212 + D + ++ C+ C+ C+ SC ++ G A W E Sbjct: 312 RMAMRDDEDLEETLYCIRCSACANSCANFQQVGGHAFGGETYTGGIATGWEAGIGGEESA 371 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 E ++L C CT++CP G++ Sbjct: 372 EEFNDL--------CTGCSRCTEACPVGIDI 394 >gi|147920051|ref|YP_686192.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] gi|110621588|emb|CAJ36866.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] Length = 384 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 14/140 (10%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 + P K + + S H+ + W +L H R C Sbjct: 241 KIMVEPANP--KGVEIRAKVESSMHKLADKWRMRD-----FSMLSPHLWRDLEKETSRCT 293 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C CP + +DR P+I+++ +D F RL ++ D C Sbjct: 294 KCYACIDKCPVCFPAADRLKKPSIMVRRGTLPVDQM--FHLRRLAHISD-----SCINCG 346 Query: 232 NCTQSCPKGLNPAKAIAKIK 251 C + CP + A I+ Sbjct: 347 QCEECCPMEIPLALFSHAIR 366 >gi|16078281|ref|NP_389098.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] gi|221309064|ref|ZP_03590911.1| hypothetical protein Bsubs1_06726 [Bacillus subtilis subsp. subtilis str. 168] gi|221313391|ref|ZP_03595196.1| hypothetical protein BsubsN3_06662 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318314|ref|ZP_03599608.1| hypothetical protein BsubsJ_06601 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322587|ref|ZP_03603881.1| hypothetical protein BsubsS_06707 [Bacillus subtilis subsp. subtilis str. SMY] gi|81342378|sp|O34720|YJGC_BACSU RecName: Full=Probable oxidoreductase yjgC gi|2612888|gb|AAC46312.1| formate dehydrogenase alpha subunit homolog [Bacillus subtilis subsp. subtilis str. 168] gi|2633570|emb|CAB13073.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] Length = 985 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 12 VEMEASEEQTVLQLLNNSSIEVPQVCYHPSLGPIETCDTCIVSINGELKRSCSAELKDGD 71 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + P L + + + + H +++ P Sbjct: 72 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDHKP 131 Query: 156 QSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ +C++C C +C + W D Sbjct: 132 YHKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 189 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 190 ------------SCVSCGHCSTVCP 202 >gi|323968397|gb|EGB63803.1| electron transporter [Escherichia coli M863] Length = 740 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 376 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 418 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|257086464|ref|ZP_05580825.1| iron-binding oxidase subunit [Enterococcus faecalis D6] gi|256994494|gb|EEU81796.1| iron-binding oxidase subunit [Enterococcus faecalis D6] gi|315028066|gb|EFT39998.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX2137] Length = 490 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|198284274|ref|YP_002220595.1| hypothetical protein Lferr_2185 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665969|ref|YP_002426935.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248795|gb|ACH84388.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518182|gb|ACK78768.1| iron-sulfur cluster-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 228 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 11/111 (9%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + D + L C+ C C+ +CPS + P ++Q Sbjct: 6 EMREMFDEIRADFRYDHELNGCLNCGICTATCPSAQFYD---YSPREIVQLLWT------ 56 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E + D +++ + C M C CP +P + ++ + + + Sbjct: 57 ENVEQIYDAMQEKM--WACAQCMTCAARCPFKNSPGGLVMIMREVSIRHGM 105 >gi|74317394|ref|YP_315134.1| heterodisulfide reductase [Thiobacillus denitrificans ATCC 25259] gi|74056889|gb|AAZ97329.1| heterodisulfide reductase [Thiobacillus denitrificans ATCC 25259] Length = 420 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 34/120 (28%), Gaps = 13/120 (10%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--- 205 + L+ D CV C C+ +C Y + P ++ R + + Sbjct: 6 EKGIHALKEVIDAPIASYFESCVHCGICADACLFYTETKEPKYTPINKVEPMRRVYEQEY 65 Query: 206 ---SRDEFQGERLDNLEDPF-------RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 R + + D C C+ CP G + I K + L Sbjct: 66 TLLGRLKKLVGLSKPVTDAELDAWQHLAYDACTLCDRCSLVCPVGNDITYMIRKFREGLA 125 >gi|298674390|ref|YP_003726140.1| CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon [Methanohalobium evestigatum Z-7303] gi|298287378|gb|ADI73344.1| CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit [Methanohalobium evestigatum Z-7303] Length = 801 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 24/90 (26%), Gaps = 19/90 (21%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV C C CP+ SD A + L D C Sbjct: 410 ERCVHCKECELVCPTNLSISDAMSAAETGDFAP--------------FEELHDK-----C 450 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C Q CPK + I K ++ Sbjct: 451 IGCGRCEQVCPKDIPVLNVIEKSAQRVIRE 480 >gi|260911526|ref|ZP_05918113.1| iron-sulfur cluster-binding protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634360|gb|EEX52463.1| iron-sulfur cluster-binding protein [Prevotella sp. oral taxon 472 str. F0295] Length = 456 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 12/129 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + R + +++ + E +C+ C C +CP Y Sbjct: 264 STTYTSHFRKARPGGEMHVVIVDNGRSDMIANDE----HWQTLKCIRCGACMNTCPVYR- 318 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ G + L C ++C CP + P Sbjct: 319 -------RSTGYSYSYFIPGPIGINLGMFKSPEQHSGNLSACSLCLSCDNVCPTKVAPGS 371 Query: 246 AIAKIKMML 254 + + L Sbjct: 372 QVYTWRQSL 380 >gi|254410340|ref|ZP_05024119.1| hypothetical protein MC7420_2855 [Microcoleus chthonoplastes PCC 7420] gi|196182546|gb|EDX77531.1| hypothetical protein MC7420_2855 [Microcoleus chthonoplastes PCC 7420] Length = 188 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ S D E ++ L +++ C +C CP+G + A I ++ + + Sbjct: 3 IVQSED---DELIEELLKSDKIWYCGQCFSCKTRCPRGNSVASVILALRRLAI 52 >gi|156740579|ref|YP_001430708.1| FAD linked oxidase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231907|gb|ABU56690.1| FAD linked oxidase domain protein [Roseiflexus castenholzii DSM 13941] Length = 976 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 35/129 (27%), Gaps = 17/129 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSC 180 +VD R E + + + + + C C T C Sbjct: 530 IVDAPPMDRHLRYGERYHPI----QLHTRFRFSDTGGIVGAVELCNGNGLCRKMSGGTMC 585 Query: 181 PSYWWNSDRYLGPAILLQAYRWL---IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 PSY D A R + D G R+ + D C CT C Sbjct: 586 PSYMVTRDEEHSTRGRANALRMVFSGALPLDALTGARMKEVMD-----LCLECKGCTGEC 640 Query: 238 PKGLNPAKA 246 P +N + Sbjct: 641 PSRVNMTRL 649 >gi|37523005|ref|NP_926382.1| oxidoreductase [Gloeobacter violaceus PCC 7421] gi|35214008|dbj|BAC91377.1| glr3436 [Gloeobacter violaceus PCC 7421] Length = 981 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 31/114 (27%), Gaps = 13/114 (11%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + + + C C T CPSY D Sbjct: 533 RYGPGYRTQELATTFDFSREFGFARAAEMCNGNGNCRKQDVGTMCPSYQATLDEKHSTRG 592 Query: 196 LLQAYRWLIDSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R ++ + + F G L + D C + C CP +N AK Sbjct: 593 RANALRSVLAGQAGSESFTGRGLYEVMD-----LCLSCKACQTECPSSVNMAKL 641 >gi|134298017|ref|YP_001111513.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134298024|ref|YP_001111520.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050717|gb|ABO48688.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] gi|134050724|gb|ABO48695.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 314 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 8/97 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C +CP + S+ ++ + + D + + L Sbjct: 193 AAFIAKEMEKCIRCYACRQACP-MCYCSECFVDCGAPAWIGKSAANVDDNALFQAVRVL- 250 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C ++CP G+ + + ++ Sbjct: 251 --HLAGRCVDCGACERACPMGIKL----SLLNRKMVK 281 >gi|114563345|ref|YP_750858.1| electron transport complex protein RnfC [Shewanella frigidimarina NCIMB 400] gi|114334638|gb|ABI72020.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella frigidimarina NCIMB 400] Length = 846 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 41/152 (26%), Gaps = 25/152 (16%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L ++D ++ P VI + + + + + Sbjct: 310 GNYWLRIGTTVEDALSQVSFQPESSQKVI------VGGPMMGYALADLDVPILKGTNCLL 363 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 E D C+ C C+ +CP+ L P L + E Sbjct: 364 TPSQAEIAPDPDEKA-CIRCGECAVACPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D F L C C+ CP + + Sbjct: 406 EYDKAA-SFNLKDCIECGCCSYVCPSDIPLVE 436 >gi|260773218|ref|ZP_05882134.1| electron transport complex protein RnfC [Vibrio metschnikovii CIP 69.14] gi|260612357|gb|EEX37560.1| electron transport complex protein RnfC [Vibrio metschnikovii CIP 69.14] Length = 734 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ C+ C C+ +CP+ L P L Sbjct: 353 PITKTSNCILAPTSKEISAPQAEMACIRCGLCADACPAS-------LLPQQLQWH----- 400 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E D E L C C CP + + + K + RK Sbjct: 401 -----AKAEEYDKCE-ELNLKDCIECGACAYVCPSEIPLVQYYRQAKAEIRTRK 448 >gi|218130126|ref|ZP_03458930.1| hypothetical protein BACEGG_01713 [Bacteroides eggerthii DSM 20697] gi|217987630|gb|EEC53958.1| hypothetical protein BACEGG_01713 [Bacteroides eggerthii DSM 20697] Length = 965 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 13/110 (11%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + ++ E + +C C T CP+Y D Sbjct: 529 RYDQSELEMNTFFDYSRQEGWLCA--IEQCNGAGDCRKLDLFGGTMCPTYRATKDERNTT 586 Query: 194 AILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R LI + Q +R +E L C + C CP ++ Sbjct: 587 RARANILRELLIHPQ---QRDRFSQVEILDILDTCVSCKACKSECPSNVD 633 >gi|315453264|ref|YP_004073534.1| oxidoreductase ferredoxin-type electron transport protein [Helicobacter felis ATCC 49179] gi|315132316|emb|CBY82944.1| oxidoreductase ferredoxin-type electron transport protein [Helicobacter felis ATCC 49179] Length = 451 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 28/84 (33%), Gaps = 10/84 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP--FRLYRC 227 CV C C SC Y + D P L + + E L+ L P C Sbjct: 27 CVKCGKCVPSCTIYRIHKDETTSPRGFLDLIALV-------KQESLE-LNTPLKHIFESC 78 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 C Q CP L I K++ Sbjct: 79 FLCTTCVQVCPFHLPIDSMIEKVR 102 >gi|224584034|ref|YP_002637832.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254807932|sp|C0Q508|RNFC_SALPC RecName: Full=Electron transport complex protein rnfC gi|224468561|gb|ACN46391.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 704 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 28/113 (24%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S + C+ C+ C+ +CP+ Y D+ + Sbjct: 363 PSVAEMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHI 413 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 414 A---------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|170682353|ref|YP_001743625.1| electron transport complex protein RnfC [Escherichia coli SMS-3-5] gi|226735444|sp|B1LEQ7|RNFC_ECOSM RecName: Full=Electron transport complex protein rnfC gi|170520071|gb|ACB18249.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli SMS-3-5] Length = 676 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 376 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 418 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|198244954|ref|YP_002215678.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226735449|sp|B5FIE7|RNFC_SALDC RecName: Full=Electron transport complex protein rnfC gi|197939470|gb|ACH76803.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623424|gb|EGE29769.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 704 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 28/113 (24%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S + C+ C+ C+ +CP+ Y D+ + Sbjct: 363 PSVAEMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHI 413 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 414 A---------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|167551572|ref|ZP_02345326.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323654|gb|EDZ11493.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 735 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 28/113 (24%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S + C+ C+ C+ +CP+ Y D+ + Sbjct: 363 PSVAEMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHI 413 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 414 A---------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|52549638|gb|AAU83487.1| heterodisulfide reductase subunit C [uncultured archaeon GZfos28G7] Length = 210 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 12/115 (10%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + + + L C C+ C+ CP + P ++Q Sbjct: 1 MPIKTWELDPNFKNEIMSEAGGERLASCFQCSTCTLGCPITEFVPG--YNPRKIIQMSLL 58 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + R + L +P L+ C CT CP+ + A + ++ + Sbjct: 59 GM---------RDEVLSNPD-LWVCLICQTCTARCPQDVRIADVLGALRRIAERE 103 >gi|62180045|ref|YP_216462.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75483500|sp|Q57PI0|RNFC_SALCH RecName: Full=Electron transport complex protein rnfC gi|62127678|gb|AAX65381.1| putative respiratory-chain NADH dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714515|gb|EFZ06086.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 704 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 28/113 (24%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 S + C+ C+ C+ +CP+ Y D+ + Sbjct: 363 PSVAEMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHI 413 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 414 A---------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|331677494|ref|ZP_08378169.1| electron transport complex protein RnfC [Escherichia coli H591] gi|331073954|gb|EGI45274.1| electron transport complex protein RnfC [Escherichia coli H591] Length = 544 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 300 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 341 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 342 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 372 >gi|324014761|gb|EGB83980.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 60-1] Length = 574 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323973845|gb|EGB69018.1| electron transporter [Escherichia coli TA007] Length = 623 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323962199|gb|EGB57793.1| electron transporter [Escherichia coli H489] Length = 659 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323937424|gb|EGB33702.1| electron transporter [Escherichia coli E1520] Length = 631 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|315297365|gb|EFU56645.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 16-3] Length = 580 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|315291967|gb|EFU51319.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 153-1] Length = 569 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|331653024|ref|ZP_08354029.1| electron transport complex protein RnfC [Escherichia coli M718] gi|331049122|gb|EGI21194.1| electron transport complex protein RnfC [Escherichia coli M718] Length = 596 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|307310800|ref|ZP_07590446.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli W] gi|306908978|gb|EFN39474.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli W] Length = 608 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|301329557|ref|ZP_07222340.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 78-1] gi|300844326|gb|EFK72086.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 78-1] Length = 576 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300821500|ref|ZP_07101647.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 119-7] gi|300526003|gb|EFK47072.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 119-7] Length = 640 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300931505|ref|ZP_07146822.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 187-1] gi|300460699|gb|EFK24192.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 187-1] Length = 553 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 351 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 392 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 393 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 423 >gi|300936047|ref|ZP_07150994.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 21-1] gi|300458773|gb|EFK22266.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 21-1] Length = 578 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300927478|ref|ZP_07143191.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 182-1] gi|300416582|gb|EFJ99892.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 182-1] Length = 575 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300921314|ref|ZP_07137681.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 115-1] gi|300411733|gb|EFJ95043.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 115-1] Length = 576 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300988844|ref|ZP_07178839.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 45-1] gi|300407382|gb|EFJ90920.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 45-1] Length = 570 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300907218|ref|ZP_07124880.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 84-1] gi|300401022|gb|EFJ84560.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 84-1] Length = 573 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300990137|ref|ZP_07179144.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 200-1] gi|300305772|gb|EFJ60292.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 200-1] Length = 571 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|301050123|ref|ZP_07197027.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 185-1] gi|300298145|gb|EFJ54530.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 185-1] Length = 579 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|293409940|ref|ZP_06653516.1| conserved hypothetical protein [Escherichia coli B354] gi|291470408|gb|EFF12892.1| conserved hypothetical protein [Escherichia coli B354] Length = 634 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 376 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 418 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|293414946|ref|ZP_06657589.1| electron transport complex protein RnfC [Escherichia coli B185] gi|291432594|gb|EFF05573.1| electron transport complex protein RnfC [Escherichia coli B185] Length = 611 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|293446004|ref|ZP_06662426.1| electron transport complex protein RnfC [Escherichia coli B088] gi|291322834|gb|EFE62262.1| electron transport complex protein RnfC [Escherichia coli B088] Length = 662 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|256618693|ref|ZP_05475539.1| iron-binding oxidase subunit [Enterococcus faecalis ATCC 4200] gi|257089521|ref|ZP_05583882.1| iron-binding oxidase [Enterococcus faecalis CH188] gi|312903642|ref|ZP_07762818.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0635] gi|256598220|gb|EEU17396.1| iron-binding oxidase subunit [Enterococcus faecalis ATCC 4200] gi|256998333|gb|EEU84853.1| iron-binding oxidase [Enterococcus faecalis CH188] gi|310632995|gb|EFQ16278.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0635] gi|315577470|gb|EFU89661.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0630] Length = 490 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|256022710|ref|ZP_05436575.1| electron transport complex protein RnfC [Escherichia sp. 4_1_40B] Length = 597 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|256018178|ref|ZP_05432043.1| electron transport complex protein RnfC [Shigella sp. D9] gi|332279226|ref|ZP_08391639.1| electron transport complex protein rnfC [Shigella sp. D9] gi|332101578|gb|EGJ04924.1| electron transport complex protein rnfC [Shigella sp. D9] Length = 565 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|170768759|ref|ZP_02903212.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia albertii TW07627] gi|170122307|gb|EDS91238.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia albertii TW07627] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|332097845|gb|EGJ02818.1| electron transport complex protein rnfC [Shigella dysenteriae 155-74] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|324119385|gb|EGC13272.1| electron transporter [Escherichia coli E1167] Length = 655 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|324019506|gb|EGB88725.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 117-3] Length = 543 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 344 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 385 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 386 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 416 >gi|331673198|ref|ZP_08373966.1| electron transport complex protein RnfC [Escherichia coli TA280] gi|331069396|gb|EGI40783.1| electron transport complex protein RnfC [Escherichia coli TA280] Length = 608 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|307138283|ref|ZP_07497639.1| electron transport complex protein RnfC [Escherichia coli H736] gi|331642222|ref|ZP_08343357.1| electron transport complex protein RnfC [Escherichia coli H736] gi|331039020|gb|EGI11240.1| electron transport complex protein RnfC [Escherichia coli H736] Length = 621 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|255976211|ref|ZP_05426797.1| iron-sulfur cluster binding protein [Enterococcus faecalis T2] gi|307278855|ref|ZP_07559918.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0860] gi|307288586|ref|ZP_07568570.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0109] gi|255969083|gb|EET99705.1| iron-sulfur cluster binding protein [Enterococcus faecalis T2] gi|306500493|gb|EFM69826.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0109] gi|306504526|gb|EFM73733.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX0860] gi|315165520|gb|EFU09537.1| iron-sulfur cluster-binding protein [Enterococcus faecalis TX1302] Length = 490 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 312 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 365 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 366 -CGACTETCPVKIPLHELLIEHRKVMTD 392 >gi|227885955|ref|ZP_04003760.1| electron transport complex protein RnfC [Escherichia coli 83972] gi|227837047|gb|EEJ47513.1| electron transport complex protein RnfC [Escherichia coli 83972] Length = 616 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|332970698|gb|EGK09679.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Kingella kingae ATCC 23330] Length = 1280 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + D L + Sbjct: 815 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLAEAFLYEEQTRRGVSMKHFDELGNI 874 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP ++ I+ L Sbjct: 875 G--DHCTVCHRCVKPCPVNIDFGDVTVDIRAFL 905 >gi|323947999|gb|EGB43992.1| electron transporter [Escherichia coli H120] Length = 643 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|321314956|ref|YP_004207243.1| putative oxidoreductase [Bacillus subtilis BSn5] gi|320021230|gb|ADV96216.1| putative oxidoreductase [Bacillus subtilis BSn5] Length = 985 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 12 VEMEASEEQTVLQLLNNSSIEVPQVCYHPSLGPIETCDTCIVSINGELKRSCSAELKDGD 71 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + P L + + + + H +++ P Sbjct: 72 IIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDHKP 131 Query: 156 QSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ +C++C C +C + W D Sbjct: 132 YHKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 189 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 190 ------------SCVSCGHCSTVCP 202 >gi|331657598|ref|ZP_08358560.1| electron transport complex protein RnfC [Escherichia coli TA206] gi|331055846|gb|EGI27855.1| electron transport complex protein RnfC [Escherichia coli TA206] Length = 622 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|283780117|ref|YP_003370872.1| D-lactate dehydrogenase (cytochrome) [Pirellula staleyi DSM 6068] gi|283438570|gb|ADB17012.1| D-lactate dehydrogenase (cytochrome) [Pirellula staleyi DSM 6068] Length = 999 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 33/127 (25%), Gaps = 14/127 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRYL 191 + + + L + EC C C T CP + Sbjct: 543 EVTVVHEPPGRMESPLELHLAWNEPLPMVASECNGCGRCRTQSPEMRMCPIFRMAPAEEA 602 Query: 192 GPAILLQAY-RWLIDSRDEF--QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 P ++ D ER N+ D C C CP ++ K + Sbjct: 603 SPRAKANLLQSFVAGQLDVADLTKERFKNIAD-----LCVNCHQCRLECPAAVDIPKLMI 657 Query: 249 KIKMMLL 255 + K + Sbjct: 658 ESKAQYV 664 >gi|224827236|ref|ZP_03700330.1| FAD linked oxidase domain protein [Lutiella nitroferrum 2002] gi|224600525|gb|EEG06714.1| FAD linked oxidase domain protein [Lutiella nitroferrum 2002] Length = 1283 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + D L D Sbjct: 815 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGTGLLTEAFLYEEQTRRGVSFKHFDELSDV 874 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP ++ ++ L Sbjct: 875 --ADHCTVCHRCVKPCPVKIDFGDVSVAMRNFL 905 >gi|333018895|gb|EGK38188.1| electron transport complex protein rnfC [Shigella flexneri K-227] Length = 644 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 377 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|333005861|gb|EGK25377.1| electron transport complex protein rnfC [Shigella flexneri K-272] Length = 620 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 353 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 394 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 395 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 425 >gi|262274543|ref|ZP_06052354.1| electron transport complex protein RnfC [Grimontia hollisae CIP 101886] gi|262221106|gb|EEY72420.1| electron transport complex protein RnfC [Grimontia hollisae CIP 101886] Length = 690 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 18/88 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ ++L Q +W +D + E + L+ C Sbjct: 379 CIRCSACAEACPA-----------SLLPQQLQWYAKDQDFDKCE-------EYNLFDCIE 420 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CP + + + K + R Sbjct: 421 CGACAYVCPSEIPLVQYYRQAKSEIRTR 448 >gi|258516627|ref|YP_003192849.1| formate dehydrogenase, alpha subunit [Desulfotomaculum acetoxidans DSM 771] gi|257780332|gb|ACV64226.1| formate dehydrogenase, alpha subunit [Desulfotomaculum acetoxidans DSM 771] Length = 893 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + P +E+ + + +C++C C +C G Sbjct: 112 QNYAYRYDVQGNAFPGEKHNYPIENENPFIVRDMNKCILCGKCVRACAEIQ-------GR 164 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +++ AYR F + ++ P C +C CP G Sbjct: 165 SVIDFAYR-------GFDAKVSPAMDLPLGESECVFCGSCVAVCPVG 204 >gi|70606159|ref|YP_255029.1| formate dehydrogenase alpha chain [Sulfolobus acidocaldarius DSM 639] gi|68566807|gb|AAY79736.1| formate dehydrogenase alpha chain [Sulfolobus acidocaldarius DSM 639] Length = 976 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 53/205 (25%), Gaps = 30/205 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNTLACVKDMKDIKG 109 +++ + L L K P + C +C + ++G + Sbjct: 12 EVELNTELSLALALMEKGFYVPHVCYNTGLTPIQSCDTCIVEVNGK-LVRSCAIKAVEGM 70 Query: 110 AIAV--------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 +I V L + + + + + H ++ K Sbjct: 71 SINVNSPRALNARKTAVSRILRYHKLYCTICENNNGDCELHEAVIKLNINSQKYVDKGYA 130 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +C++C C +C + N ++ + R + D+ Sbjct: 131 LDDTGPFYTYDPSQCILCGRCVEACQDFAVNEVIWIDWNLNPP--RVVWDN--------- 179 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 +P C C CP Sbjct: 180 ---GNPIGNSSCVNCGTCVTVCPVN 201 >gi|332758459|gb|EGJ88780.1| electron transport complex protein rnfC [Shigella flexneri K-671] gi|332767030|gb|EGJ97229.1| electron transport complex, RnfABCDGE type, C subunit [Shigella flexneri 2930-71] Length = 684 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 353 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 394 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 395 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 425 >gi|261367179|ref|ZP_05980062.1| oxidoreductase [Subdoligranulum variabile DSM 15176] gi|282570774|gb|EFB76309.1| oxidoreductase [Subdoligranulum variabile DSM 15176] Length = 378 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 11/138 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P++ ++ + DM+ ++ + + ++ C C+ C Sbjct: 243 PNVKMVLSGMSDMAQLLDNTGYMQRFQPLNKEEEEL--IRQAVSIINSSIAIPCTGCSYC 300 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-EFQGERLDNLEDPFR-LYRCHTIMNCT 234 + CP + + L A ++ +D QGE DNL F C C Sbjct: 301 TDGCPMHIAIPKYF----SLYNADLQEMEGKDWTPQGEYYDNLTKTFGKASDCIACGQCE 356 Query: 235 QSCPKGLNPAKAIAKIKM 252 CP+ L I +K Sbjct: 357 GVCPQHLPI---IENLKQ 371 >gi|189426313|ref|YP_001953490.1| hypothetical protein Glov_3264 [Geobacter lovleyi SZ] gi|189422572|gb|ACD96970.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter lovleyi SZ] Length = 428 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++ + L +CV C C ++CP++ L + L+ + + + Sbjct: 11 QRIEEELKKCVKCGTCRSNCPAFTAFQREPATARGKLTLVQHLLKDDIDLDDQTYLAMS- 69 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C +C CP + + + + L ++ Sbjct: 70 -----KCLLCGSCVDRCPNDVPTDEIVIAAREALAKKR 102 >gi|295675459|ref|YP_003603983.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1002] gi|295435302|gb|ADG14472.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1002] Length = 1368 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 946 >gi|296121131|ref|YP_003628909.1| FAD linked oxidase [Planctomyces limnophilus DSM 3776] gi|296013471|gb|ADG66710.1| FAD linked oxidase domain protein [Planctomyces limnophilus DSM 3776] Length = 1020 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 16/99 (16%) Query: 170 CVMCACC------STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF----QGERLDNLE 219 C C C CP + P +R ++ R + E L L Sbjct: 584 CNGCGNCRREDRNHRMCPFFHVTHQEVSSPRAKAVVFRDILSGRLSPETLTRPEMLPILN 643 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C+ CP ++ + ++K ++ Sbjct: 644 ------SCFNCQQCSLECPSHVDIPRMAIELKGQAAAQQ 676 >gi|85705961|ref|ZP_01037057.1| putative glycolate oxidase [Roseovarius sp. 217] gi|85669549|gb|EAQ24414.1| putative glycolate oxidase [Roseovarius sp. 217] Length = 976 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 11/96 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D R + R D + + Sbjct: 558 EMCNNNGACRKLAGGAMCPSYRVTRDERDVTRGRANTLRLALSGRLGQNALFSDEMAETI 617 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C C + CP G++ +AK+K +L ++ Sbjct: 618 KL--CVGCKACKRECPTGVD----MAKMKTEVLYQR 647 >gi|331668306|ref|ZP_08369154.1| electron transport complex protein RnfC [Escherichia coli TA271] gi|331063500|gb|EGI35411.1| electron transport complex protein RnfC [Escherichia coli TA271] Length = 620 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|301631429|ref|XP_002944800.1| PREDICTED: hypothetical protein LOC100496925 [Xenopus (Silurana) tropicalis] Length = 1475 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L +A+ + +R + ED Sbjct: 1004 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGVSIQHWQEFEDV 1063 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C CP ++ ++ +L+ Sbjct: 1064 S--DHCTVCHKCHTPCPVKIDFGDVTMAMRSLLVK 1096 >gi|301029281|ref|ZP_07192385.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 196-1] gi|299877809|gb|EFI86020.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 196-1] Length = 520 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 321 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 362 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 363 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 393 >gi|284921553|emb|CBG34625.1| electron transport complex protein [Escherichia coli 042] Length = 741 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 376 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 417 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 418 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|111017367|ref|YP_700339.1| oxidoreductase, N-termminal [Rhodococcus jostii RHA1] gi|110816897|gb|ABG92181.1| possible oxidoreductase, N-termminal [Rhodococcus jostii RHA1] Length = 949 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 H+D ++ C C CPSY + + + +I+ D Sbjct: 528 HHDDGDFTQAVHRCTGVGKCRADNTATGAVMCPSYHATREEKDSTRGRARVLQEMINGTD 587 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C+ CP G++ Sbjct: 588 IDGGWRSPEVHDA--LDLCLSCKGCSSDCPTGVD 619 >gi|188495694|ref|ZP_03002964.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli 53638] gi|188490893|gb|EDU65996.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli 53638] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323268765|gb|EGA52224.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 655 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323242646|gb|EGA26667.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] Length = 673 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323232168|gb|EGA16274.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] Length = 561 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323224588|gb|EGA08865.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323254810|gb|EGA38608.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 552 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323217293|gb|EGA02013.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] Length = 579 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323211028|gb|EFZ95887.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323237790|gb|EGA21849.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323266729|gb|EGA50216.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 595 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323205623|gb|EFZ90586.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] Length = 590 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|323198190|gb|EFZ83299.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] Length = 557 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322680007|gb|EFY76046.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] Length = 673 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322677330|gb|EFY73394.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322667964|gb|EFY64124.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] Length = 582 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322665219|gb|EFY61407.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|323194067|gb|EFZ79266.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323202876|gb|EFZ87911.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] Length = 642 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322658697|gb|EFY54955.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] Length = 570 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322650862|gb|EFY47253.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] Length = 559 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322646614|gb|EFY43122.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] Length = 565 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322641119|gb|EFY37762.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 644 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322622924|gb|EFY19766.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] Length = 586 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322620523|gb|EFY17385.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322685564|gb|EFY81560.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] Length = 569 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|322616074|gb|EFY12990.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322628769|gb|EFY25554.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631479|gb|EFY28237.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638814|gb|EFY35509.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322654536|gb|EFY50857.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322671624|gb|EFY67745.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|323221947|gb|EGA06338.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323234339|gb|EGA18426.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323260352|gb|EGA43970.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 562 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|320086067|emb|CBY95841.1| Electron transport complex protein rnfC [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 642 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|319955286|ref|YP_004166553.1| d-lactate dehydrogenase (cytochrome) [Cellulophaga algicola DSM 14237] gi|319423946|gb|ADV51055.1| D-lactate dehydrogenase (cytochrome) [Cellulophaga algicola DSM 14237] Length = 969 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGP 193 + K LL + + +C C + CPSY + Sbjct: 534 RYDIDRKEPEIKTLLDFSDSEGILKAAEKCNGSGDCRKTHHSAGGMCPSYHATKNEKDTT 593 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + + + L++ F L C + C CP ++ A Sbjct: 594 RGRANALREFLTTSEAPNKFNQKELKEAFDL--CLSCKACASECPSNVDVATL 644 >gi|298292504|ref|YP_003694443.1| FAD linked oxidase [Starkeya novella DSM 506] gi|296929015|gb|ADH89824.1| FAD linked oxidase domain protein [Starkeya novella DSM 506] Length = 990 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 42/147 (28%), Gaps = 15/147 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V D S F R + P S + C C Sbjct: 520 PGKIVRPPKFDDRSLF----RYAPDYKVAPIPATLDWTGYSGAGGGLQGAIEMCNNNGAC 575 Query: 177 STS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 CPSY D R I R D + + +L C + Sbjct: 576 RKMAGGVMCPSYRVTRDEKDVTRGRANTLRLAISGRLGPDALASDKMMETLKL--CVSCK 633 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP G++ +AK+K+ L + Sbjct: 634 GCRRECPTGVD----MAKMKIEALAAR 656 >gi|238911689|ref|ZP_04655526.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 644 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|242310575|ref|ZP_04809730.1| ferredoxin-type oxidoreductase [Helicobacter pullorum MIT 98-5489] gi|239522973|gb|EEQ62839.1| ferredoxin-type oxidoreductase [Helicobacter pullorum MIT 98-5489] Length = 431 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 29/103 (28%), Gaps = 6/103 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E+ + CV C C C + N D P + E Sbjct: 1 MAHFENYNYLQTSDACVKCGKCLPDCTIFNINGDEATSPRGFIDLLGAYQRKEIELDKNA 60 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + + C T C CP L I I+ L + Sbjct: 61 KEIF---EKCFLCTT---CVNVCPNSLPTDTLIENIRYELAQK 97 >gi|207857039|ref|YP_002243690.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226735450|sp|B5QV02|RNFC_SALEP RecName: Full=Electron transport complex protein rnfC gi|206708842|emb|CAR33172.1| Electron transport complex protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 704 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|205352830|ref|YP_002226631.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226735451|sp|B5RAK2|RNFC_SALG2 RecName: Full=Electron transport complex protein rnfC gi|205272611|emb|CAR37520.1| putative electron transport complex protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627901|gb|EGE34244.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 673 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168819208|ref|ZP_02831208.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343902|gb|EDZ30666.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 704 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168463131|ref|ZP_02697062.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633861|gb|EDX52213.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168264620|ref|ZP_02686593.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|200390674|ref|ZP_03217285.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603119|gb|EDZ01665.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205346950|gb|EDZ33581.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|194443713|ref|YP_002040706.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226735453|sp|B4T594|RNFC_SALNS RecName: Full=Electron transport complex protein rnfC gi|194402376|gb|ACF62598.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168240973|ref|ZP_02665905.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448184|ref|YP_002045495.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|226735452|sp|B4THD4|RNFC_SALHS RecName: Full=Electron transport complex protein rnfC gi|194406488|gb|ACF66707.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339389|gb|EDZ26153.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|204927691|ref|ZP_03218892.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323033|gb|EDZ08229.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 729 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|197250222|ref|YP_002146588.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226735448|sp|B5F6J0|RNFC_SALA4 RecName: Full=Electron transport complex protein rnfC gi|197213925|gb|ACH51322.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168235530|ref|ZP_02660588.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734341|ref|YP_002114470.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226735455|sp|B4TV17|RNFC_SALSV RecName: Full=Electron transport complex protein rnfC gi|194709843|gb|ACF89064.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291094|gb|EDY30447.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 732 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|168229832|ref|ZP_02654890.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470158|ref|ZP_03076142.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456522|gb|EDX45361.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335440|gb|EDZ22204.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|197265683|ref|ZP_03165757.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243938|gb|EDY26558.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|161614124|ref|YP_001588089.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189043393|sp|A9N025|RNFC_SALPB RecName: Full=Electron transport complex protein rnfC gi|161363488|gb|ABX67256.1| hypothetical protein SPAB_01863 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|56413574|ref|YP_150649.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362498|ref|YP_002142135.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81360680|sp|Q5PIB9|RNFC_SALPA RecName: Full=Electron transport complex protein rnfC gi|226735454|sp|B5BKB2|RNFC_SALPK RecName: Full=Electron transport complex protein rnfC gi|56127831|gb|AAV77337.1| putative NADH reducing dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093975|emb|CAR59471.1| putative NADH reducing dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|29141784|ref|NP_805126.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051629|ref|ZP_03344507.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425981|ref|ZP_03358731.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649168|ref|ZP_03379221.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855037|ref|ZP_03383277.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|29137412|gb|AAO68975.1| putative NADH reducing dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 673 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|16764805|ref|NP_460420.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994288|ref|ZP_02575380.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|24638187|sp|Q8ZPM2|RNFC_SALTY RecName: Full=Electron transport complex protein rnfC gi|16419978|gb|AAL20379.1| putative respiratory-chain NADH dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327844|gb|EDZ14608.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246661|emb|CBG24471.1| Electron transport complex protein rnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993347|gb|ACY88232.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157990|emb|CBW17485.1| Electron transport complex protein rnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912440|dbj|BAJ36414.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224076|gb|EFX49139.1| Electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129727|gb|ADX17157.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988342|gb|AEF07325.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 735 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|16760456|ref|NP_456073.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|25330737|pir||AE0692 probable NADH reducing dehydrogenase STY1665 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502752|emb|CAD01910.1| putative NADH reducing dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi] Length = 673 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 415 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 457 >gi|298380776|ref|ZP_06990375.1| electron transport complex protein RnfC [Escherichia coli FVEC1302] gi|298278218|gb|EFI19732.1| electron transport complex protein RnfC [Escherichia coli FVEC1302] Length = 588 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|194431936|ref|ZP_03064226.1| electron transport complex, RnfABCDGE type, C subunit [Shigella dysenteriae 1012] gi|194419844|gb|EDX35923.1| electron transport complex, RnfABCDGE type, C subunit [Shigella dysenteriae 1012] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|84685192|ref|ZP_01013091.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Maritimibacter alkaliphilus HTCC2654] gi|84666924|gb|EAQ13395.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Rhodobacterales bacterium HTCC2654] Length = 504 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + L+ AYR D R E +G+ + +L C M C Sbjct: 243 CIYACP-WPRIQAAMIDEDTLVVAYR---DWRGEPRGKHRKG-PEAEKLGDCIDCMACVN 297 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 298 VCPMGIDIRD 307 >gi|332096012|gb|EGJ01017.1| electron transport complex protein rnfC [Shigella boydii 3594-74] Length = 716 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 353 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 394 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 395 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 425 >gi|325267328|ref|ZP_08133990.1| NADH-quinone oxidoreductase subunit I [Kingella denitrificans ATCC 33394] gi|324981265|gb|EGC16915.1| NADH-quinone oxidoreductase subunit I [Kingella denitrificans ATCC 33394] Length = 195 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 48 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 105 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 106 CP-----------------AMAINIESEEREDGTRRTTRYDID-LTKCIFCGFCEEACP- 146 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 147 ----TDAIVE 152 >gi|323169935|gb|EFZ55591.1| electron transport complex protein rnfC [Escherichia coli LT-68] Length = 684 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 353 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 394 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 395 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 425 >gi|315286322|gb|EFU45758.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 110-3] Length = 644 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|300819310|ref|ZP_07099509.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 107-1] gi|300528081|gb|EFK49143.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 107-1] Length = 676 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|218961809|ref|YP_001741584.1| electron transport complex protein rnfC, NAD and 4Fe-4S binding subunit (rnfC fragment) [Candidatus Cloacamonas acidaminovorans] gi|167730466|emb|CAO81378.1| electron transport complex protein rnfC, NAD and 4Fe-4S binding subunit (rnfC fragment) [Candidatus Cloacamonas acidaminovorans] Length = 439 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 19/104 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L + ED + + C+ CA C CP L P +++ A ++ Sbjct: 354 LMNTEDARLNEE-GNCLRCARCVDVCPLN-------LVPCMIVSAVKYDNQ--------- 396 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L L C C CP + + I K+ + K Sbjct: 397 --KLAVRSGLNDCMKCGACAYVCPAQIRLVQYIDTGKIRYAEAK 438 >gi|320181352|gb|EFW56271.1| Electron transport complex protein RnfC [Shigella boydii ATCC 9905] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|313648904|gb|EFS13341.1| electron transport complex protein rnfC [Shigella flexneri 2a str. 2457T] Length = 676 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 377 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|326791176|ref|YP_004308997.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium lentocellum DSM 5427] gi|326541940|gb|ADZ83799.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium lentocellum DSM 5427] Length = 439 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 ++ C+ C C T CP + L P L + E D Sbjct: 356 FTDEEVTSVPTTHCMHCGKCVTVCPMH-------LIPNTLHRHALH----------EHYD 398 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D + + C C+ +CP + ++I K ++ +K Sbjct: 399 KFMDYYGM-DCIECGCCSYTCPAKRDIVQSIRTAKAVIRAKK 439 >gi|268595645|ref|ZP_06129812.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 35/02] gi|268549034|gb|EEZ44452.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 35/02] Length = 164 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R +G C+ C C Sbjct: 17 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRCYPNGEERCIACKLCEAV 74 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 75 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 115 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 116 ----TDAIVE 121 >gi|313126262|ref|YP_004036532.1| fad/fmn-dependent dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312292627|gb|ADQ67087.1| FAD/FMN-dependent dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 1040 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 13/133 (9%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCP 181 + + + L + C C C CP Sbjct: 591 TSAHEMTEHLRFSPDYDFDAGFDPALNWENENGFQGMAELCHGCGGCRGPQETTGGVMCP 650 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 ++ + L R + S D E+ ++ C C + CP G+ Sbjct: 651 TFRAEEEEILSTRGRSNMLRQAM-SGDLSPEEQFEDEFVEEVTDLCIGCKGCMKDCPSGV 709 Query: 242 NPAKAIAKIKMML 254 + +AK+K + Sbjct: 710 D----MAKMKAEV 718 >gi|323978231|gb|EGB73317.1| electron transporter [Escherichia coli TW10509] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323186099|gb|EFZ71455.1| electron transport complex protein rnfC [Escherichia coli 1357] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|317492086|ref|ZP_07950517.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919969|gb|EFV41297.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] Length = 712 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y E + R L+ C Sbjct: 378 CIRCSQCADACPAGLLPQQLYWFSRGK------------EHEKAR------QHHLFDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 420 CGACAYVCPSSIPLVQ 435 >gi|145590078|ref|YP_001156675.1| FAD linked oxidase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048484|gb|ABP35111.1| FAD linked oxidase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1279 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 19/213 (8%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +D + L RS I G G+ I L + Sbjct: 699 NIPVNSDDYEMLQDAHRA---VDRIMKLARSLDGVISGEHGIGITKLEYLTEAELKDFRS 755 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 V P L+ + + + + S + + + D + Sbjct: 756 YKNRVDPE-GRFNKGKLMPNADLSMA-YTPSFGLMGHESIIMQQSDIGAIAD-----SVK 808 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + D+ L ++L++A+ + +R + +D Sbjct: 809 DCLRCGKCKPVCSTHVPRANLLYSPRDKILATSLLIEAFLYEEQTRRGVSIRHWEMFDDV 868 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ + ++ +L Sbjct: 869 AA--HCTVCHKCLTPCPVNIDFGEVTMNMRNLL 899 >gi|73669019|ref|YP_305034.1| heterodisulfide reductase subunit D [Methanosarcina barkeri str. Fusaro] gi|72396181|gb|AAZ70454.1| heterodisulfide reductase, subunit D [Methanosarcina barkeri str. Fusaro] Length = 382 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 17/90 (18%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 EC C C CP Y + + Y +L E + E D L RC Sbjct: 9 SECKECGQCLKVCPRYNDLG-------LFTRLYGYL-----EGKSE-----IDADCLLRC 51 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 T CT +CP+GL I+ + + Sbjct: 52 LTCGLCTNACPEGLGIKTLISPARKKWVSE 81 >gi|187732180|ref|YP_001880384.1| electron transport complex protein RnfC [Shigella boydii CDC 3083-94] gi|226735456|sp|B2U2C8|RNFC_SHIB3 RecName: Full=Electron transport complex protein rnfC gi|187429172|gb|ACD08446.1| electron transport complex, RnfABCDGE type, C subunit [Shigella boydii CDC 3083-94] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|330721036|gb|EGG99188.1| Electron transport complex protein RnfC [gamma proteobacterium IMCC2047] Length = 441 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ ++L Q W SR+ + L C Sbjct: 41 CIRCGMCAEACPA-----------SLLPQQLYWFSKSREFDKAL-------SHNLLDCIE 82 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 83 CGACSYVCPSNIPLVQ 98 >gi|329298912|ref|ZP_08256248.1| electron transport complex, RnfABCDGE type subunit C [Plautia stali symbiont] Length = 648 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ CP+ Y W D + Sbjct: 367 EMGQPQEEQSCIRCSACADVCPAKLLPQQLY-----------WYSLGSDHDKAR------ 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP + + Sbjct: 410 -AHHIDDCIECGACAYVCPSNIPLVQ 434 >gi|323956694|gb|EGB52430.1| electron transporter [Escherichia coli H263] Length = 667 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323187054|gb|EFZ72370.1| electron transport complex protein rnfC [Escherichia coli RN587/1] Length = 773 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323169187|gb|EFZ54863.1| electron transport complex protein rnfC [Shigella sonnei 53G] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|315060936|gb|ADT75263.1| electron transport complex protein RnfC [Escherichia coli W] gi|323378493|gb|ADX50761.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli KO11] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|293405128|ref|ZP_06649120.1| electron transport complex protein RnfC [Escherichia coli FVEC1412] gi|291427336|gb|EFF00363.1| electron transport complex protein RnfC [Escherichia coli FVEC1412] Length = 633 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|283785156|ref|YP_003365021.1| electron transport complex protein [Citrobacter rodentium ICC168] gi|282948610|emb|CBG88201.1| electron transport complex protein [Citrobacter rodentium ICC168] Length = 678 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Sbjct: 367 EMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATA------- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----------AIAKIKMMLLDRK 258 + C C CP + + AI++ + + K Sbjct: 411 --HNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAISQEEKRAAEAK 457 >gi|170020019|ref|YP_001724973.1| electron transport complex protein RnfC [Escherichia coli ATCC 8739] gi|312969650|ref|ZP_07783833.1| electron transport complex protein rnfC [Escherichia coli 1827-70] gi|189043391|sp|B1IQC5|RNFC_ECOLC RecName: Full=Electron transport complex protein rnfC gi|169754947|gb|ACA77646.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli ATCC 8739] gi|310337935|gb|EFQ03024.1| electron transport complex protein rnfC [Escherichia coli 1827-70] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|82544003|ref|YP_407950.1| electron transport complex protein RnfC [Shigella boydii Sb227] gi|123741996|sp|Q320Y6|RNFC_SHIBS RecName: Full=Electron transport complex protein rnfC gi|81245414|gb|ABB66122.1| putative membrane protein [Shigella boydii Sb227] gi|320186301|gb|EFW61037.1| Electron transport complex protein RnfC [Shigella flexneri CDC 796-83] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|78356258|ref|YP_387707.1| hydrogenase, iron-sulfur cluster-binding subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218663|gb|ABB38012.1| hydrogenase, iron-sulfur cluster-binding subunit, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 323 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 8/121 (6%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ K + + ++L S + + CV C C +CP Sbjct: 174 ARVEEGTVPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATS 233 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 WL + + RC C ++CP + ++ Sbjct: 234 RNPH----WLTQESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLM----LLRRS 285 Query: 254 L 254 + Sbjct: 286 M 286 >gi|74312044|ref|YP_310463.1| electron transport complex protein RnfC [Shigella sonnei Ss046] gi|123759605|sp|Q3Z1Y4|RNFC_SHISS RecName: Full=Electron transport complex protein rnfC gi|73855521|gb|AAZ88228.1| putative membrane protein [Shigella sonnei Ss046] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|34499690|ref|NP_903905.1| (S)-2-hydroxy-acid oxidase [Chromobacterium violaceum ATCC 12472] gi|34105541|gb|AAQ61895.1| probable (S)-2-hydroxy-acid oxidase [Chromobacterium violaceum ATCC 12472] Length = 1284 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + + L D Sbjct: 816 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSLKHFEELSDV 875 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP ++ ++ L Sbjct: 876 --ADHCTVCHRCVKPCPVKIDFGDVSVAMRNFL 906 >gi|16129587|ref|NP_416146.1| electron transport complex protein required for the reduction of SoxR; predicted membrane-associated NADH oxidoreductase [Escherichia coli str. K-12 substr. MG1655] gi|89108471|ref|AP_002251.1| fused predicted 4Fe-4S ferredoxin-type protein [Escherichia coli str. K-12 substr. W3110] gi|170081293|ref|YP_001730613.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli str. K-12 substr. DH10B] gi|238900845|ref|YP_002926641.1| fused putative 4Fe-4S ferredoxin-type protein/hypothetical protein [Escherichia coli BW2952] gi|17368316|sp|P77611|RNFC_ECOLI RecName: Full=Electron transport complex protein rnfC gi|226735441|sp|B1XFU1|RNFC_ECODH RecName: Full=Electron transport complex protein rnfC gi|259494049|sp|C4ZY92|RNFC_ECOBW RecName: Full=Electron transport complex protein rnfC gi|1742688|dbj|BAA15384.1| fused predicted 4Fe-4S ferredoxin-type protein [Escherichia coli str. K12 substr. W3110] gi|1787916|gb|AAC74701.1| electron transport complex protein required for the reduction of SoxR; predicted membrane-associated NADH oxidoreductase [Escherichia coli str. K-12 substr. MG1655] gi|169889128|gb|ACB02835.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli str. K-12 substr. DH10B] gi|238861218|gb|ACR63216.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli BW2952] gi|260449247|gb|ACX39669.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli DH1] gi|309701855|emb|CBJ01167.1| electron transport complex protein [Escherichia coli ETEC H10407] gi|315136270|dbj|BAJ43429.1| electron transport complex protein RnfC [Escherichia coli DH1] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|191165932|ref|ZP_03027769.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli B7A] gi|193064894|ref|ZP_03045970.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli E22] gi|260843935|ref|YP_003221713.1| fused putative 4Fe-4S ferredoxin-type protein/hypothetical protein [Escherichia coli O103:H2 str. 12009] gi|260855454|ref|YP_003229345.1| fused putative 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli O26:H11 str. 11368] gi|260868121|ref|YP_003234523.1| fused putative 4Fe-4S ferredoxin-type protein/hypothetical protein [Escherichia coli O111:H- str. 11128] gi|301303141|ref|ZP_07209267.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 124-1] gi|190904063|gb|EDV63775.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli B7A] gi|192927381|gb|EDV81999.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli E22] gi|257754103|dbj|BAI25605.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli O26:H11 str. 11368] gi|257759082|dbj|BAI30579.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli O103:H2 str. 12009] gi|257764477|dbj|BAI35972.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli O111:H- str. 11128] gi|300841550|gb|EFK69310.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 124-1] gi|315257571|gb|EFU37539.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 85-1] gi|320197812|gb|EFW72420.1| Electron transport complex protein RnfC [Escherichia coli EC4100B] gi|323163522|gb|EFZ49348.1| electron transport complex protein rnfC [Escherichia coli E128010] gi|323180943|gb|EFZ66481.1| electron transport complex protein rnfC [Escherichia coli 1180] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|157161091|ref|YP_001458409.1| electron transport complex protein RnfC [Escherichia coli HS] gi|166991047|sp|A8A0H2|RNFC_ECOHS RecName: Full=Electron transport complex protein rnfC gi|157066771|gb|ABV06026.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli HS] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|333005285|gb|EGK24805.1| electron transport complex protein rnfC [Shigella flexneri VA-6] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 377 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|332343347|gb|AEE56681.1| electron transport complex RnfC [Escherichia coli UMNK88] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|332091211|gb|EGI96300.1| electron transport complex protein rnfC [Shigella boydii 5216-82] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|331647118|ref|ZP_08348212.1| electron transport complex protein RnfC [Escherichia coli M605] gi|331043901|gb|EGI16037.1| electron transport complex protein RnfC [Escherichia coli M605] Length = 677 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|306813407|ref|ZP_07447597.1| electron transport complex protein RnfC [Escherichia coli NC101] gi|305853152|gb|EFM53592.1| electron transport complex protein RnfC [Escherichia coli NC101] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|284166203|ref|YP_003404482.1| FAD linked oxidase [Haloterrigena turkmenica DSM 5511] gi|284015858|gb|ADB61809.1| FAD linked oxidase domain protein [Haloterrigena turkmenica DSM 5511] Length = 1055 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 37/149 (24%), Gaps = 27/149 (18%) Query: 120 SVIKDLVVDMSHFY-----------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 + +DL + + + L+ D + Sbjct: 587 ELFRDLKTAFDPDWLLNPGNVCGDHRMIEQLRFDPDYEFEAGFEPALEWDNDNGFQGMVE 646 Query: 169 ECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDN 217 C C C + CP+Y + L R + D E L Sbjct: 647 LCHGCGGCRSEQETTGGVMCPTYRAAEEESLSTRGRANMLRQAMSGDLETDAIDEEFLAE 706 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + D C C + CP ++ AK Sbjct: 707 IMD-----LCVGCKGCARDCPSEVDMAKL 730 >gi|261258339|ref|ZP_05950872.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli O157:H7 str. FRIK966] Length = 589 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|253773413|ref|YP_003036244.1| electron transport complex protein RnfC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253324457|gb|ACT29059.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|223041743|ref|ZP_03611936.1| electron transport complex protein RnfC [Actinobacillus minor 202] gi|223017427|gb|EEF15845.1| electron transport complex protein RnfC [Actinobacillus minor 202] Length = 571 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 23/117 (19%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ + H + + C+ C+ CS +CP +L Q W Sbjct: 364 QSPITKTANCIIAPDHFEYAPPEDERACIRCSSCSDACPV-----------GLLPQQLYW 412 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 S D + + + L C C CP + I + KI Sbjct: 413 FARSEDHEKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 457 >gi|218554197|ref|YP_002387110.1| electron transport complex protein RnfC [Escherichia coli IAI1] gi|218695192|ref|YP_002402859.1| electron transport complex protein RnfC [Escherichia coli 55989] gi|226735440|sp|B7M0I6|RNFC_ECO8A RecName: Full=Electron transport complex protein rnfC gi|254807930|sp|B7L5I2|RNFC_ECO55 RecName: Full=Electron transport complex protein rnfC gi|218351924|emb|CAU97649.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli 55989] gi|218360965|emb|CAQ98538.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli IAI1] gi|323152867|gb|EFZ39137.1| electron transport complex protein rnfC [Escherichia coli EPECa14] Length = 708 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|186475140|ref|YP_001856610.1| FAD linked oxidase domain-containing protein [Burkholderia phymatum STM815] gi|184191599|gb|ACC69564.1| FAD linked oxidase domain protein [Burkholderia phymatum STM815] Length = 1371 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D+ D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDDFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|194436648|ref|ZP_03068749.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli 101-1] gi|254161691|ref|YP_003044799.1| electron transport complex protein RnfC [Escherichia coli B str. REL606] gi|194424680|gb|EDX40666.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli 101-1] gi|253973592|gb|ACT39263.1| electron transport complex protein RnfC [Escherichia coli B str. REL606] gi|253977787|gb|ACT43457.1| electron transport complex protein RnfC [Escherichia coli BL21(DE3)] gi|313848649|emb|CAQ32106.2| member of SoxR-reducing complex [Escherichia coli BL21(DE3)] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|193070267|ref|ZP_03051211.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli E110019] gi|192956448|gb|EDV86907.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli E110019] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|157157957|ref|YP_001462918.1| electron transport complex protein RnfC [Escherichia coli E24377A] gi|166991046|sp|A7ZM89|RNFC_ECO24 RecName: Full=Electron transport complex protein rnfC gi|157079987|gb|ABV19695.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli E24377A] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|322832791|ref|YP_004212818.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Rahnella sp. Y9602] gi|321167992|gb|ADW73691.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Rahnella sp. Y9602] Length = 1176 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 18/120 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--I 204 + ++ + I C C C +CP + + + P + A L + Sbjct: 666 PTGTTQWEKRNIAEEVPIWKPDLCTQCNHCVAACP-HSAIRAKVVQPEFMADAPSALQSL 724 Query: 205 D--SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP---------KGLNPAKAIAKIKMM 253 D SRD + + + C C + CP K +N A I ++ Sbjct: 725 DVKSRDMRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQDPSIKAINMADRIEHLEEE 780 >gi|241762604|ref|ZP_04760677.1| electron transport complex, RnfABCDGE type, C subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753652|ref|YP_003226545.1| electron transport complex, RnfABCDGE type, C subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241372799|gb|EER62503.1| electron transport complex, RnfABCDGE type, C subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553015|gb|ACV75961.1| electron transport complex, RnfABCDGE type, C subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 487 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C CP L P + R RD+ + + Sbjct: 359 EEMDHRPTEACLRCGRCVDVCPC-------GLSPVEMASLIR-----RDKLEEVEKLQVM 406 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C + +C+ CP L + K + +R+ Sbjct: 407 D------CFSCGSCSYVCPSHLPLVQYFNYAKGEIWNRR 439 >gi|237809075|ref|YP_002893515.1| electron transport complex, RnfABCDGE type, C subunit [Tolumonas auensis DSM 9187] gi|237501336|gb|ACQ93929.1| electron transport complex, RnfABCDGE type, C subunit [Tolumonas auensis DSM 9187] Length = 483 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 23/91 (25%), Gaps = 18/91 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ED CV C C +CP +D E + + Sbjct: 345 LLLTEDELPNPKASACVRCGRCIGACPMSLTP-----------------LDMVAELKVDN 387 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C +C CP + + Sbjct: 388 FGKAA-EMGVMDCLLCGSCAYVCPAAIPLTQ 417 Score = 35.9 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 17/169 (10%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH------FYSQHRSIEPWLKTVS 147 G L + K + A+ +P + D+ V + + + R P V Sbjct: 222 GLPALYPMGSEKQLIEAVTGRQVPSGKLSADVGVLVQNVATSIAIFEALRFGRPLTHRVI 281 Query: 148 P--KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 A E+ + + C ++ P+ +G AI Sbjct: 282 TISGDAVEVPSNVMAPVGMPISEIVAQCGGLKST-PARIVLGGPMMGRAITDIHA----- 335 Query: 206 SRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + L ED + C C +CP L P +A++K Sbjct: 336 PVTKGTSGVLLLTEDELPNPKASACVRCGRCIGACPMSLTPLDMVAELK 384 >gi|218699803|ref|YP_002407432.1| electron transport complex protein RnfC [Escherichia coli IAI39] gi|226735439|sp|B7NU04|RNFC_ECO7I RecName: Full=Electron transport complex protein rnfC gi|218369789|emb|CAR17560.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli IAI39] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|86158951|ref|YP_465736.1| hypothetical protein Adeh_2529 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775462|gb|ABC82299.1| hypothetical protein Adeh_2529 [Anaeromyxobacter dehalogenans 2CP-C] Length = 164 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 25/100 (25%), Gaps = 9/100 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 DR+ + C+ C C +C L + + R Sbjct: 44 PTLVADREVDEAAAGCISCGLCEPACDLAAAAPAV----RALGVHAAFRLHGRAGPDLAL 99 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP G+ ++ + ++ Sbjct: 100 SAGALA-----ACDGCGACDARCPVGVPISRVVRALRARA 134 >gi|56552708|ref|YP_163547.1| RnfABCDGE type eelectron transport complex subunit C [Zymomonas mobilis subsp. mobilis ZM4] gi|56544282|gb|AAV90436.1| electron transport complex, RnfABCDGE type, C subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 487 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 18/99 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C CP L P + R RD+ + + Sbjct: 359 EEMDHRPTEACLRCGRCVDVCPC-------GLSPVEMASLIR-----RDKLEEVEKLQVM 406 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C + +C+ CP L + K + +R+ Sbjct: 407 D------CFSCGSCSYVCPSHLPLVQYFNYAKGEIWNRR 439 >gi|15802043|ref|NP_288065.1| electron transport complex protein RnfC [Escherichia coli O157:H7 EDL933] gi|17368144|sp|P58324|RNFC_ECO57 RecName: Full=Electron transport complex protein rnfC gi|12515618|gb|AAG56618.1|AE005386_9 putative membrane protein [Escherichia coli O157:H7 str. EDL933] Length = 740 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|309793394|ref|ZP_07687821.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 145-7] gi|308122981|gb|EFO60243.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 145-7] Length = 772 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|281178701|dbj|BAI55031.1| putative transport protein [Escherichia coli SE15] Length = 806 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|261600896|gb|ACX90499.1| FAD linked oxidase domain protein [Sulfolobus solfataricus 98/2] Length = 740 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + K ++ ++ I +C+ C+ C SC +Y ++ P Sbjct: 265 KEYEEFHKDIIRNFKKYEIKIRSKRINKNTIVEASKCINCSLCLDSCLAYNTTNNILYSP 324 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 325 LG-----RFN----------RL--LTGEGNFEFCFGCASCQEACPVGINISNLMEIL 364 >gi|208816704|ref|ZP_03257824.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4045] gi|208731047|gb|EDZ79736.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4045] Length = 708 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|156934161|ref|YP_001438077.1| electron transport complex protein RnfC [Cronobacter sakazakii ATCC BAA-894] gi|166225091|sp|A7MMK9|RNFC_ENTS8 RecName: Full=Electron transport complex protein rnfC gi|156532415|gb|ABU77241.1| hypothetical protein ESA_01988 [Cronobacter sakazakii ATCC BAA-894] Length = 776 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ L C Sbjct: 376 HCIRCSACADACPADLLPQQLYWFSVG---------QQHDKATAHNLA---------DCI 417 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 418 ECGACAYVCPSNIPLVQ 434 >gi|144900808|emb|CAM77672.1| 4Fe-4S ferredoxin, iron-sulfur binding [Magnetospirillum gryphiswaldense MSR-1] Length = 376 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 22/131 (16%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ E K + P A+ L + E + C+ C C+ CP+ + + + Sbjct: 235 KNAETQQKHLDPAAARALAANPEHPRWDQVAARCLTCGNCTMVCPTCFCTTVEDVTDLKG 294 Query: 197 LQAYRW------------LIDSRDEFQGER----------LDNLEDPFRLYRCHTIMNCT 234 A RW I R L D F C C Sbjct: 295 DNAERWRKWDSCFTSDFSYIHGGAVRTETRSRYRQWITHKLSTWVDQFDETGCVGCGRCI 354 Query: 235 QSCPKGLNPAK 245 CP G++ + Sbjct: 355 TWCPVGIDITE 365 >gi|24113019|ref|NP_707529.1| electron transport complex protein RnfC [Shigella flexneri 2a str. 301] gi|30063144|ref|NP_837315.1| electron transport complex protein RnfC [Shigella flexneri 2a str. 2457T] gi|110805602|ref|YP_689122.1| electron transport complex protein RnfC [Shigella flexneri 5 str. 8401] gi|81724487|sp|Q83RB9|RNFC_SHIFL RecName: Full=Electron transport complex protein rnfC gi|122366544|sp|Q0T4E8|RNFC_SHIF8 RecName: Full=Electron transport complex protein rnfC gi|24051983|gb|AAN43236.1| putative membrane protein [Shigella flexneri 2a str. 301] gi|30041393|gb|AAP17122.1| putative membrane protein [Shigella flexneri 2a str. 2457T] gi|110615150|gb|ABF03817.1| putative membrane protein [Shigella flexneri 5 str. 8401] gi|281601063|gb|ADA74047.1| Electron transport complex protein rnfC [Shigella flexneri 2002017] gi|332757136|gb|EGJ87476.1| electron transport complex protein rnfC [Shigella flexneri 4343-70] gi|332758063|gb|EGJ88388.1| electron transport complex protein rnfC [Shigella flexneri 2747-71] gi|333003991|gb|EGK23526.1| electron transport complex protein rnfC [Shigella flexneri K-218] Length = 740 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 377 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|15899148|ref|NP_343753.1| Iron-sulfur protein, putative [Sulfolobus solfataricus P2] gi|284173738|ref|ZP_06387707.1| Iron-sulfur protein, putative [Sulfolobus solfataricus 98/2] gi|13815699|gb|AAK42543.1| Iron-sulfur protein, putative [Sulfolobus solfataricus P2] Length = 751 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ + K ++ ++ I +C+ C+ C SC +Y ++ P Sbjct: 276 KEYEEFHKDIIRNFKKYEIKIRSKRINKNTIVEASKCINCSLCLDSCLAYNTTNNILYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL L C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RL--LTGEGNFEFCFGCASCQEACPVGINISNLMEIL 375 >gi|83311714|ref|YP_421978.1| electron transport complex protein rnfC [Magnetospirillum magneticum AMB-1] gi|82946555|dbj|BAE51419.1| Electron transport complex protein rnfC [Magnetospirillum magneticum AMB-1] Length = 498 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 26/101 (25%), Gaps = 18/101 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L + C+ C C T CP G + A D D Sbjct: 354 LALTQAETNEHAPSPCIRCGSCVTYCPC---------GLVPVEMASYIRNDKLD------ 398 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + C + +C+ CP + K + Sbjct: 399 ---LAAKIGVQDCVSCGSCSYICPSHIPLVHFFNYAKGKIA 436 >gi|330911436|gb|EGH39946.1| electron transport complex protein RnfC [Escherichia coli AA86] Length = 709 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|330830241|ref|YP_004393193.1| RnfABCDGE type electron transport complex subunit C [Aeromonas veronii B565] gi|328805377|gb|AEB50576.1| Electron transport complex, RnfABCDGE type, C subunit [Aeromonas veronii B565] Length = 903 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 47/153 (30%), Gaps = 27/153 (17%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSV-IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 G + ++ + + P V + ++ + ++ ++ ++P A+ Sbjct: 308 GNAWVRLGTPVRWLLQRFELQPEAEQRVIMGGPMMGFTLPHAMVPVVKATNCLLAPTQAE 367 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E C+ C+ C+ +CP+ + Y + Sbjct: 368 LPAPGPEQ--------PCIRCSACADACPATLLPQELYWYSRAKEY-----------DKA 408 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 E+L+ ++ C C CP + + Sbjct: 409 EKLNLMD-------CIECGACAWVCPSEIPLVQ 434 >gi|323952614|gb|EGB48486.1| electron transporter [Escherichia coli H252] Length = 651 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|307256193|ref|ZP_07537980.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865374|gb|EFM97270.1| Electron transport complex protein rnfC [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 661 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP +L Q Sbjct: 355 QSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPV-----------GLLPQQ 403 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 W S D + + + L C C CP + I + KI Sbjct: 404 LYWYARSEDHDKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|215486806|ref|YP_002329237.1| electron transport complex protein RnfC [Escherichia coli O127:H6 str. E2348/69] gi|312966607|ref|ZP_07780827.1| electron transport complex protein rnfC [Escherichia coli 2362-75] gi|254807929|sp|B7URX0|RNFC_ECO27 RecName: Full=Electron transport complex protein rnfC gi|215264878|emb|CAS09264.1| fused predicted 4Fe-4S ferredoxin-type protein/conserved protein [Escherichia coli O127:H6 str. E2348/69] gi|312288717|gb|EFR16617.1| electron transport complex protein rnfC [Escherichia coli 2362-75] Length = 741 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|212212190|ref|YP_002303126.1| NADH dehydrogenase subunit I [Coxiella burnetii CbuG_Q212] gi|212010600|gb|ACJ17981.1| NADH-quinone oxidoreductase chain I [Coxiella burnetii CbuG_Q212] Length = 168 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + +FY + + + R+ +G C+ C C Sbjct: 20 ELLKGLSLTLRYFYR--KKVTIHYPDEEVPSSFRFRGMLALRRYPNGEERCIACKLCEAV 77 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP E G R L D ++C C ++CP Sbjct: 78 CPACAITIEA--GPR--------------EADGSRRTTLYDIDA-FKCINCGFCEEACPV 120 Query: 240 G 240 Sbjct: 121 D 121 >gi|118595249|ref|ZP_01552596.1| (S)-2-hydroxy-acid oxidase [Methylophilales bacterium HTCC2181] gi|118441027|gb|EAV47654.1| (S)-2-hydroxy-acid oxidase [Methylophilales bacterium HTCC2181] Length = 1282 Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 9/99 (9%) Query: 167 LYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C C ++ + ++ L ++L++A+ + +R + D Sbjct: 812 ISDCMRCGKCKPVCTTHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGISLKHFDEFN 871 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C CP ++ ++ L ++ Sbjct: 872 DV--ADHCTVCHKCLNPCPVNIDYGDVSIAMRNFLREQG 908 >gi|324006984|gb|EGB76203.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 57-2] Length = 808 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|313201941|ref|YP_004040599.1| fad linked oxidase domain-containing protein [Methylovorus sp. MP688] gi|312441257|gb|ADQ85363.1| FAD linked oxidase domain protein [Methylovorus sp. MP688] Length = 1279 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 167 LYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C C ++ + ++ LG ++L++A+ + +R + D Sbjct: 807 ISDCLRCGKCKPVCTTHVPRANLLYSPRNKILGTSLLIEAFLYEEQTRRGISIKHFDEFN 866 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C CP ++ ++ L ++ Sbjct: 867 DV--ADHCTVCHKCLNPCPVDIDFGDVSIAMRNFLREQG 903 >gi|300950446|ref|ZP_07164365.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 116-1] gi|300450223|gb|EFK13843.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 116-1] Length = 496 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ + D+ + C Sbjct: 300 CIRCSACADACPADLLPQQLFWFSKG---------QQHDKATT---------HNIADCIE 341 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 342 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 372 >gi|253999968|ref|YP_003052031.1| FAD linked oxidase domain-containing protein [Methylovorus sp. SIP3-4] gi|253986647|gb|ACT51504.1| FAD linked oxidase domain protein [Methylovorus sp. SIP3-4] Length = 1270 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 167 LYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C C ++ + ++ LG ++L++A+ + +R + D Sbjct: 798 ISDCLRCGKCKPVCTTHVPRANLLYSPRNKILGTSLLIEAFLYEEQTRRGISIKHFDEFN 857 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C CP ++ ++ L ++ Sbjct: 858 DV--ADHCTVCHKCLNPCPVDIDFGDVSIAMRNFLREQG 894 >gi|218705130|ref|YP_002412649.1| electron transport complex protein RnfC [Escherichia coli UMN026] gi|300901564|ref|ZP_07119633.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 198-1] gi|226735442|sp|B7NB83|RNFC_ECOLU RecName: Full=Electron transport complex protein rnfC gi|218432227|emb|CAR13117.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli UMN026] gi|300355031|gb|EFJ70901.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 198-1] Length = 740 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|222056797|ref|YP_002539159.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221566086|gb|ACM22058.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 334 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 34/124 (27%), Gaps = 23/124 (18%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID--- 205 + L ++ E + C C C+ CP G A R D Sbjct: 209 EIKTWLTENFESPLWQEIADRCAGCGACAFLCPVCHCFDIVDEGTDAKG-ARRKSWDACG 267 Query: 206 ------------SRDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKGLNPAKA 246 RD + + F+ Y C C + CP G++ Sbjct: 268 FGKFTNHASGHNPRDIQNKRYRNRIMHKFKYYGDKFGQTLCTGCGRCIRHCPVGIDIKAV 327 Query: 247 IAKI 250 + KI Sbjct: 328 LEKI 331 >gi|26247876|ref|NP_753916.1| electron transport complex protein RnfC [Escherichia coli CFT073] gi|81748475|sp|Q8FH95|RNFC_ECOL6 RecName: Full=Electron transport complex protein rnfC gi|26108279|gb|AAN80481.1|AE016761_56 Electron transport complex protein rnfC [Escherichia coli CFT073] gi|307553652|gb|ADN46427.1| electron transport complex protein RnfC [Escherichia coli ABU 83972] Length = 742 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|110641752|ref|YP_669482.1| electron transport complex protein RnfC [Escherichia coli 536] gi|191173436|ref|ZP_03034964.1| electron transport complex protein RnfC [Escherichia coli F11] gi|123049190|sp|Q0THJ8|RNFC_ECOL5 RecName: Full=Electron transport complex protein rnfC gi|110343344|gb|ABG69581.1| electron transport complex protein RnfC [Escherichia coli 536] gi|190906278|gb|EDV65889.1| electron transport complex protein RnfC [Escherichia coli F11] Length = 774 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|323940294|gb|EGB36486.1| electron transporter [Escherichia coli E482] Length = 631 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ + D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLFWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|163733951|ref|ZP_02141393.1| RdxB protein [Roseobacter litoralis Och 149] gi|161393062|gb|EDQ17389.1| RdxB protein [Roseobacter litoralis Och 149] Length = 478 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + + W + R + + ++ + Sbjct: 204 FVFGGFAREQICIYACPWPRIQGAMMDEDTLTVAYRPWRGEPR-----KHSEEVQAGEPM 258 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 259 GDCIDCMACVNVCPVGIDIRD 279 >gi|91210842|ref|YP_540828.1| electron transport complex protein RnfC [Escherichia coli UTI89] gi|218558500|ref|YP_002391413.1| electron transport complex protein RnfC [Escherichia coli S88] gi|218689576|ref|YP_002397788.1| electron transport complex protein RnfC [Escherichia coli ED1a] gi|123387945|sp|Q1RBG7|RNFC_ECOUT RecName: Full=Electron transport complex protein rnfC gi|226735437|sp|B7M9Y3|RNFC_ECO45 RecName: Full=Electron transport complex protein rnfC gi|254807931|sp|B7MVA7|RNFC_ECO81 RecName: Full=Electron transport complex protein rnfC gi|91072416|gb|ABE07297.1| electron transport complex protein RnfC [Escherichia coli UTI89] gi|218365269|emb|CAR02990.1| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli S88] gi|218427140|emb|CAR08023.2| putative 4Fe-4S ferredoxin-type protein fused with unknown protein [Escherichia coli ED1a] gi|294490842|gb|ADE89598.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli IHE3034] gi|307626885|gb|ADN71189.1| electron transport complex protein RnfC [Escherichia coli UM146] Length = 708 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|312883749|ref|ZP_07743469.1| electron transport complex protein RnfC [Vibrio caribbenthicus ATCC BAA-2122] gi|309368599|gb|EFP96131.1| electron transport complex protein RnfC [Vibrio caribbenthicus ATCC BAA-2122] Length = 645 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + C+ C+ C+ +CP+ ++L Q + Sbjct: 350 SQVPITKTSNCILAPTRREISSDQNEMACIRCSACADACPA-----------SLLPQQLQ 398 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 W ++D + E L + C C CP + + Sbjct: 399 WYAKAKDYEKCEEL-------HIGDCIECGACAFVCPSEIPLVQ 435 >gi|291300950|ref|YP_003512228.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stackebrandtia nassauensis DSM 44728] gi|290570170|gb|ADD43135.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stackebrandtia nassauensis DSM 44728] Length = 370 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 30/109 (27%), Gaps = 22/109 (20%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--------LIDSRDE 209 E D C+ C C+ +CP+ + + A RW + +R Sbjct: 248 RESAHWDDVASRCLTCGNCTMACPTCFCTTVTDSTDLTGDHAERWQQWDSCFDIDFARIH 307 Query: 210 FQGER--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R L D F C C CP G++ Sbjct: 308 GDEVRTSAPARYRQWISHKLGTWHDQFGESGCVGCGRCVAWCPVGIDIT 356 >gi|229553131|ref|ZP_04441856.1| iron-sulfur cluster-binding protein [Lactobacillus rhamnosus LMS2-1] gi|229313427|gb|EEN79400.1| iron-sulfur cluster-binding protein [Lactobacillus rhamnosus LMS2-1] Length = 494 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHHLLIKHREVMMDK 392 >gi|114777066|ref|ZP_01452086.1| electron transport complex protein RnfC [Mariprofundus ferrooxydans PV-1] gi|114552587|gb|EAU55047.1| electron transport complex protein RnfC [Mariprofundus ferrooxydans PV-1] Length = 521 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS +CP+ G L A D+ + ++ + E L+ C Sbjct: 386 CIRCGHCSEACPA---------GLVPNLLA--------DQCRSDQFEKAESYD-LFDCIE 427 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C+ CP + IA+ + Sbjct: 428 CGACSYVCPSNIPLVHYFRYGKGQIAQQRRE 458 >gi|282917657|ref|ZP_06325408.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus D139] gi|283767400|ref|ZP_06340315.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus H19] gi|282318412|gb|EFB48771.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus D139] gi|283461279|gb|EFC08363.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus H19] Length = 984 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 54/194 (27%), Gaps = 29/194 (14%) Query: 60 LDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV----- 113 L + ++ P++ S C +C + IDG +C + V Sbjct: 22 LLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVK 81 Query: 114 --------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKI 164 L + + + H +++ W + + + ++ + Sbjct: 82 DAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYR 141 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C++C C +C N + D + + + P Sbjct: 142 YDPNQCILCGRCVEACQDIEVNETIRIDW--------------DREHPRVIWDNDVPINE 187 Query: 225 YRCHTIMNCTQSCP 238 C + C CP Sbjct: 188 SSCVSCGQCATVCP 201 >gi|237752346|ref|ZP_04582826.1| ferredoxin-type oxidoreductase [Helicobacter winghamensis ATCC BAA-430] gi|229375835|gb|EEO25926.1| ferredoxin-type oxidoreductase [Helicobacter winghamensis ATCC BAA-430] Length = 437 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 31/106 (29%), Gaps = 12/106 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ---AYRWLIDSRDEFQ 211 + +D CV C C C + N D P + AY+ D+ Sbjct: 1 MAHFKDYSYFKTSDACVKCGKCLPDCTIFSINGDEATSPRGFIDLLGAYQRKEIPLDKNA 60 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + C T C CP L I I+ + + Sbjct: 61 KNIFET------CFLCTT---CVSVCPNSLPTDTLIENIRYEIAQK 97 >gi|254519305|ref|ZP_05131361.1| electron transport complex protein [Clostridium sp. 7_2_43FAA] gi|226913054|gb|EEH98255.1| electron transport complex protein [Clostridium sp. 7_2_43FAA] Length = 308 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 18/97 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E + Y C+ C C CP L P L++ Y+ + E Sbjct: 227 LFLTEKDSPSEESYSCIRCGKCLRVCP-------EGLNPIKLVELYKM------GEKEEF 273 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + F +C C+ +CP + A+ I K Sbjct: 274 IK-----FGGEKCIDCGLCSFACPSNIEIAQTIKTAK 305 >gi|222033388|emb|CAP76129.1| electron transport complex protein rnfC [Escherichia coli LF82] gi|312946229|gb|ADR27056.1| electron transport complex protein RnfC [Escherichia coli O83:H1 str. NRG 857C] Length = 775 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|218198430|gb|EEC80857.1| hypothetical protein OsI_23475 [Oryza sativa Indica Group] Length = 705 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 16/65 (24%) Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + Q D + D L C C +CP + I + + Sbjct: 353 HVAQQIAAEENAGPDGERLRLKDPALYDEALKYCTNCKRCEVACPSDVKIGDIIQRARAD 412 Query: 254 LLDRK 258 K Sbjct: 413 FAQSK 417 >gi|320658803|gb|EFX26477.1| electron transport complex protein RnfC [Escherichia coli O55:H7 str. USDA 5905] Length = 631 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|320195473|gb|EFW70098.1| Electron transport complex protein RnfC [Escherichia coli WV_060327] Length = 740 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|320104295|ref|YP_004179886.1| FAD linked oxidase domain-containing protein [Isosphaera pallida ATCC 43644] gi|319751577|gb|ADV63337.1| FAD linked oxidase domain protein [Isosphaera pallida ATCC 43644] Length = 1019 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 30/106 (28%), Gaps = 13/106 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWL 203 +PA + + + C C T CPSY D R + Sbjct: 574 EPAHLMFDYTDQGGFARAVEMCSGVGVCRKTDGGTMCPSYMVTRDEDHSTRGRANLLRLV 633 Query: 204 ID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + D + LD D C C CP ++ AK Sbjct: 634 LSGALPADGLASDDLDAALD-----LCLGCKACKTECPSNVDLAKL 674 >gi|331663101|ref|ZP_08364011.1| electron transport complex protein RnfC [Escherichia coli TA143] gi|331058900|gb|EGI30877.1| electron transport complex protein RnfC [Escherichia coli TA143] Length = 640 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|268597677|ref|ZP_06131844.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae FA19] gi|268599929|ref|ZP_06134096.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae MS11] gi|268602263|ref|ZP_06136430.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID18] gi|268604529|ref|ZP_06138696.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae PID1] gi|268682984|ref|ZP_06149846.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID332] gi|268687412|ref|ZP_06154274.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|291042886|ref|ZP_06568627.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae DGI2] gi|293398104|ref|ZP_06642309.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae F62] gi|304389075|ref|ZP_07371119.1| NADH-quinone oxidoreductase subunit I [Neisseria meningitidis ATCC 13091] gi|268551465|gb|EEZ46484.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae FA19] gi|268584060|gb|EEZ48736.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae MS11] gi|268586394|gb|EEZ51070.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID18] gi|268588660|gb|EEZ53336.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae PID1] gi|268623268|gb|EEZ55668.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID332] gi|268627696|gb|EEZ60096.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|291013320|gb|EFE05286.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae DGI2] gi|291611367|gb|EFF40437.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae F62] gi|304336948|gb|EFM03138.1| NADH-quinone oxidoreductase subunit I [Neisseria meningitidis ATCC 13091] Length = 164 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 17 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 74 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 75 CP-----------------AMAINIESEEREDGTRRTKRYDID-LTKCIFCGFCEEACP- 115 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 116 ----TDAIVE 121 >gi|258509065|ref|YP_003171816.1| iron-sulfur cluster binding protein [Lactobacillus rhamnosus GG] gi|257148992|emb|CAR87965.1| Iron-sulfur cluster binding protein [Lactobacillus rhamnosus GG] gi|259650356|dbj|BAI42518.1| iron-sulfur cluster binding protein [Lactobacillus rhamnosus GG] Length = 494 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHHLLIKHREVMMDK 392 >gi|258540256|ref|YP_003174755.1| iron-sulfur cluster binding protein [Lactobacillus rhamnosus Lc 705] gi|257151932|emb|CAR90904.1| Iron-sulfur cluster binding protein [Lactobacillus rhamnosus Lc 705] Length = 494 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 364 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++D+ Sbjct: 365 -CAACTETCPVRIPLHHLLIKHREVMMDK 392 >gi|209918942|ref|YP_002293026.1| electron transport complex protein RnfC [Escherichia coli SE11] gi|226735443|sp|B6IB67|RNFC_ECOSE RecName: Full=Electron transport complex protein rnfC gi|209912201|dbj|BAG77275.1| putative transport protein [Escherichia coli SE11] Length = 740 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|206889910|ref|YP_002249098.1| ferredoxin, 4Fe-4S, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741848|gb|ACI20905.1| ferredoxin, 4Fe-4S, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 446 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAI 195 +++E + K ++L++ + + C+ C C+ SC Y ++ D PA Sbjct: 20 KTLENISEAEIKKAIDKVLKNEASARLKIFVETCMRCGMCTNSCHHYLAHNNDPTYAPAA 79 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ W + +++ + C+ C Q CP G++ A I+ ++ Sbjct: 80 KVKQTVWDMLNKNGNVSKDDIKKYARIAFSECNLCRRCVQFCPFGIDIAYLISLVRR 136 >gi|46202219|ref|ZP_00053559.2| COG4656: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Magnetospirillum magnetotacticum MS-1] Length = 498 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 22/93 (23%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T CP + D D L Sbjct: 362 NEHASSPCIRCGSCVTYCPCGLVPVEMASFIR---------NDKLD---------LAAKI 403 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C + +C+ CP + K + Sbjct: 404 GVQDCVSCGSCSYICPSHIPLVHFFNYAKGKIA 436 >gi|322832828|ref|YP_004212855.1| electron transport complex, RnfABCDGE type, C subunit [Rahnella sp. Y9602] gi|321168029|gb|ADW73728.1| electron transport complex, RnfABCDGE type, C subunit [Rahnella sp. Y9602] Length = 705 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + C+ C+ C+ SCP+ Y +E + R Sbjct: 376 ELGQPEPEEACIRCSLCAESCPAGLLPQQLYWFSKG------------EEHEKAR----- 418 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ C C CP + + Sbjct: 419 -KHNLFDCIECGACAYVCPSNIPLVQ 443 >gi|320653114|gb|EFX21308.1| electron transport complex protein RnfC [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 677 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|82777103|ref|YP_403452.1| electron transport complex protein RnfC [Shigella dysenteriae Sd197] gi|309788404|ref|ZP_07683008.1| electron transport complex protein rnfC [Shigella dysenteriae 1617] gi|123742129|sp|Q32FE4|RNFC_SHIDS RecName: Full=Electron transport complex protein rnfC gi|81241251|gb|ABB61961.1| putative membrane protein [Shigella dysenteriae Sd197] gi|308923786|gb|EFP69289.1| electron transport complex protein rnfC [Shigella dysenteriae 1617] Length = 772 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|15831592|ref|NP_310365.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. Sakai] gi|168763667|ref|ZP_02788674.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4501] gi|217328656|ref|ZP_03444737.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. TW14588] gi|13361805|dbj|BAB35761.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai] gi|189366209|gb|EDU84625.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4501] gi|217318003|gb|EEC26430.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. TW14588] gi|320188315|gb|EFW62977.1| Electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC1212] gi|326341995|gb|EGD65776.1| Electron transport complex protein RnfC [Escherichia coli O157:H7 str. 1044] Length = 772 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|257053891|ref|YP_003131724.1| aldo/keto reductase [Halorhabdus utahensis DSM 12940] gi|256692654|gb|ACV12991.1| aldo/keto reductase [Halorhabdus utahensis DSM 12940] Length = 379 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 32/124 (25%), Gaps = 7/124 (5%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M+ + + DR + +C C C CPS Sbjct: 253 MSTMAQVRENVEIASRSGVNQFTADDRTAVTRARDRFRALMAVDCTGCDYCMP-CPSGVQ 311 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P R + E D+L+ R C C +CP+ L Sbjct: 312 I------PRNFDLYNRLEMGDDPEAVVSAYDDLDAEARADACVACGECEDACPQNLEIIS 365 Query: 246 AIAK 249 + Sbjct: 366 LLED 369 >gi|240948590|ref|ZP_04752963.1| electron transport complex protein RnfC [Actinobacillus minor NM305] gi|240297098|gb|EER47669.1| electron transport complex protein RnfC [Actinobacillus minor NM305] Length = 793 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 23/117 (19%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ + H + + C+ C+ CS +CP +L Q W Sbjct: 358 QSPITKTANCIIAPDHFEYAPPEDERACIRCSSCSDACPV-----------GLLPQQLYW 406 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 S D + + + L C C CP + I + KI Sbjct: 407 FARSEDHEKSK-------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|117623815|ref|YP_852728.1| electron transport complex protein RnfC [Escherichia coli APEC O1] gi|166225090|sp|A1ABH4|RNFC_ECOK1 RecName: Full=Electron transport complex protein rnfC gi|115512939|gb|ABJ01014.1| electron transport complex protein RnfC [Escherichia coli APEC O1] Length = 708 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|78187017|ref|YP_375060.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium luteolum DSM 273] gi|78166919|gb|ABB24017.1| Electron transport complex, RnfABCDGE type, C subunit [Chlorobium luteolum DSM 273] Length = 441 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 18/84 (21%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C++ CP WL+ + E + RLD+ E + L C Sbjct: 364 RTCIRCGKCTSGCPQSLEP---------------WLLAT--EAEFRRLDDAET-YGLMNC 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIK 251 +C+ CP G I K Sbjct: 406 TECGSCSYQCPSGRELVHWIKYAK 429 >gi|168750557|ref|ZP_02775579.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4113] gi|168757455|ref|ZP_02782462.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4401] gi|168771171|ref|ZP_02796178.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4486] gi|168775859|ref|ZP_02800866.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4196] gi|168783452|ref|ZP_02808459.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4076] gi|168789466|ref|ZP_02814473.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC869] gi|168800889|ref|ZP_02825896.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC508] gi|195939018|ref|ZP_03084400.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4024] gi|208810265|ref|ZP_03252141.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4206] gi|208821817|ref|ZP_03262137.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4042] gi|209399637|ref|YP_002270699.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4115] gi|254793246|ref|YP_003078083.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. TW14359] gi|261227926|ref|ZP_05942207.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli O157:H7 str. FRIK2000] gi|226735438|sp|B5Z463|RNFC_ECO5E RecName: Full=Electron transport complex protein rnfC gi|187768715|gb|EDU32559.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4196] gi|188015238|gb|EDU53360.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4113] gi|188999240|gb|EDU68226.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4076] gi|189355522|gb|EDU73941.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4401] gi|189359999|gb|EDU78418.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4486] gi|189370921|gb|EDU89337.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC869] gi|189376869|gb|EDU95285.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC508] gi|208724781|gb|EDZ74488.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4206] gi|208741940|gb|EDZ89622.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4042] gi|209161037|gb|ACI38470.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. EC4115] gi|254592646|gb|ACT72007.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli O157:H7 str. TW14359] gi|326343546|gb|EGD67308.1| Electron transport complex protein RnfC [Escherichia coli O157:H7 str. 1125] Length = 772 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|49484525|ref|YP_041749.1| bifunctional protein [Staphylococcus aureus subsp. aureus MRSA252] gi|295428891|ref|ZP_06821515.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus EMRSA16] gi|81650533|sp|Q6GEC4|FDHL_STAAR RecName: Full=Putative formate dehydrogenase SAR2393 gi|49242654|emb|CAG41375.1| putative bifunctional protein [Staphylococcus aureus subsp. aureus MRSA252] gi|295127240|gb|EFG56882.1| formate dehydrogenase [Staphylococcus aureus subsp. aureus EMRSA16] Length = 984 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIELNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|28898878|ref|NP_798483.1| electron transport complex protein RnfC [Vibrio parahaemolyticus RIMD 2210633] gi|260897154|ref|ZP_05905650.1| electron transport complex protein RnfC [Vibrio parahaemolyticus Peru-466] gi|260902709|ref|ZP_05911104.1| electron transport complex, rnfABCDGE type, c subunit family protein [Vibrio parahaemolyticus AQ4037] gi|28807097|dbj|BAC60367.1| RnfC-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087160|gb|EFO36855.1| electron transport complex protein RnfC [Vibrio parahaemolyticus Peru-466] gi|308109009|gb|EFO46549.1| electron transport complex, rnfABCDGE type, c subunit family protein [Vibrio parahaemolyticus AQ4037] Length = 869 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C C+ +CP+ L P L Sbjct: 350 SQVPITKTANCILAPTRHEISAHQYEMECIRCGQCAEACPAS-------LLPQQLQWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E D LE L C C CP + + Sbjct: 401 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQ 435 >gi|226350053|ref|YP_002777166.1| putative FAD-linked oxidase [Rhodococcus opacus B4] gi|226245965|dbj|BAH47229.1| putative FAD-linked oxidase [Rhodococcus opacus B4] Length = 955 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 H+D ++ C C CPSY + + + +I+ D Sbjct: 534 HHDDGDFTQAVHRCTGVGKCRADNTATGGVMCPSYQATREEKDSTRGRARVLQEMINGTD 593 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C+ CP G++ Sbjct: 594 IDGGWRSPEVHDA--LDLCLSCKGCSSDCPTGVD 625 >gi|167750547|ref|ZP_02422674.1| hypothetical protein EUBSIR_01523 [Eubacterium siraeum DSM 15702] gi|167656473|gb|EDS00603.1| hypothetical protein EUBSIR_01523 [Eubacterium siraeum DSM 15702] Length = 495 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 34/113 (30%), Gaps = 13/113 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E ++ +CV C C+ CP +A + Sbjct: 113 HRCEDVCRMGAITFDEHQKAHIDKSKCVNCGQCAKVCP----YGAILEFKRPCERACKIG 168 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LN----PAKAIAKIK 251 SR ++++ +C + C +CP G ++ I +K Sbjct: 169 AISRATDTSSAAAHIDND----KCISCGACVYTCPFGAISDKSYIVDIIETLK 217 >gi|90408374|ref|ZP_01216537.1| electron transport complex protein RnfC [Psychromonas sp. CNPT3] gi|90310537|gb|EAS38659.1| electron transport complex protein RnfC [Psychromonas sp. CNPT3] Length = 839 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 19/128 (14%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 H + D V + +I+ ++ K L + ++ + + C+ C+ C+ Sbjct: 334 HFNPSADQKVIIGGPM-MGFTIQDLQSPITKKCNCILAPTIQEMPEAEQEQACIRCSYCA 392 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP Q W ++D + E + L C C C Sbjct: 393 DACPVELMP-----------QQLLWYAKNQDHKKLE-------AYNLSSCIECGICAFVC 434 Query: 238 PKGLNPAK 245 P + Sbjct: 435 PSTIPLVD 442 >gi|282165076|ref|YP_003357461.1| formate dehydrogenase beta chain [Methanocella paludicola SANAE] gi|282157390|dbj|BAI62478.1| formate dehydrogenase beta chain [Methanocella paludicola SANAE] Length = 370 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 16/111 (14%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR---YLGPAILLQAYRWL 203 + + + + +C+ C C+ CP + + Y G +L A + Sbjct: 268 KHQKKQFTQAAMDSSYWAKQYSKCIKCRGCTVHCPVIFDLDQKIMPYEGTGLLPPAMAYH 327 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R L C NC CP + ++ +I L Sbjct: 328 F--------ARAAALGTD-----CINCGNCEDVCPMEIPVSRLHHEISKRL 365 >gi|154483141|ref|ZP_02025589.1| hypothetical protein EUBVEN_00842 [Eubacterium ventriosum ATCC 27560] gi|149735949|gb|EDM51835.1| hypothetical protein EUBVEN_00842 [Eubacterium ventriosum ATCC 27560] Length = 379 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 9/128 (7%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + +M ++ + + + + D + C C+ C+ CP Sbjct: 253 MSNMEQLMDNMSYMKDFKPLNNEEQDIIMKAV--DAINSNIAIPCTGCSYCTEGCPKKIA 310 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA 244 + ++ + + + QGE D L F C C + CP+ L+ Sbjct: 311 IPKYF---SLYNADLQEVKEKGWTPQGEYYDRLTHTFGKASDCVACGQCEKVCPQHLSI- 366 Query: 245 KAIAKIKM 252 I +K Sbjct: 367 --IEDLKK 372 >gi|323494238|ref|ZP_08099350.1| formate dehydrogenase, alpha subunit [Vibrio brasiliensis LMG 20546] gi|323311401|gb|EGA64553.1| formate dehydrogenase, alpha subunit [Vibrio brasiliensis LMG 20546] Length = 1402 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 30/105 (28%), Gaps = 5/105 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAI 195 + + WL+ + C+ C C +C + ++ Sbjct: 602 KDHQDWLELRGKDSRHKFTVDRSSEFIEFDANRCISCGQCIQACSEQAVHGILNFVHDQN 661 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A R D R F R + +C C Q+CP G Sbjct: 662 GRPALR--PDDRPHFGSSRSGRIL--MGDSKCVQCGACVQACPTG 702 >gi|315630504|gb|ADU53759.1| formate dehydrogenase beta subunit [Methanosaeta harundinacea] Length = 386 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 14/91 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R I+ C+ C C CP+ + ++ L+ EF R ++ D Sbjct: 278 RAVIEETARCIKCYACVEVCPAL------FNTTGPYRTSFPGLVPPGLEFHLTRYAHVAD 331 Query: 221 PFRLYRCHTIMNCTQSCPKGLN---PAKAIA 248 C C + CP + AIA Sbjct: 332 -----SCINCGQCQELCPMEIPNARIMHAIA 357 >gi|291530234|emb|CBK95819.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum 70/3] gi|291557046|emb|CBL34163.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum V10Sc8a] Length = 495 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 34/113 (30%), Gaps = 13/113 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E ++ +CV C C+ CP +A + Sbjct: 113 HRCEDVCRMGAITFDEHQKAHIDKSKCVNCGQCAKVCP----YGAILEFKRPCERACKIG 168 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LN----PAKAIAKIK 251 SR ++++ +C + C +CP G ++ I +K Sbjct: 169 AISRATDTSSAAAHIDND----KCISCGACVYTCPFGAISDKSYIVDIIETLK 217 >gi|291282761|ref|YP_003499579.1| Electron transport complex protein RnfC [Escherichia coli O55:H7 str. CB9615] gi|290762634|gb|ADD56595.1| Electron transport complex protein RnfC [Escherichia coli O55:H7 str. CB9615] gi|320647300|gb|EFX16108.1| electron transport complex protein RnfC [Escherichia coli O157:H- str. 493-89] gi|320652594|gb|EFX20863.1| electron transport complex protein RnfC [Escherichia coli O157:H- str. H 2687] gi|320668653|gb|EFX35458.1| electron transport complex protein RnfC [Escherichia coli O157:H7 str. LSU-61] Length = 772 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|212634638|ref|YP_002311163.1| iron-sulfur cluster-binding protein [Shewanella piezotolerans WP3] gi|212556122|gb|ACJ28576.1| Iron-sulfur cluster-binding protein [Shewanella piezotolerans WP3] Length = 939 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L D + + Sbjct: 536 DDFVDKCLECGFCEKTCPTSALNLTPRQRIATLREIAR-LEQIGDHLAADNMRAAAKYDV 594 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + K++ Sbjct: 595 IDTCAACQLCTIACPVDNKMGQLVRKLR 622 >gi|16801792|ref|NP_472060.1| hypothetical protein lin2731 [Listeria innocua Clip11262] gi|16415267|emb|CAC97957.1| lin2731 [Listeria innocua Clip11262] Length = 995 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQDRPYREKGYLNDFTHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|306835811|ref|ZP_07468808.1| D-lactate dehydrogenase [Corynebacterium accolens ATCC 49726] gi|304568285|gb|EFM43853.1| D-lactate dehydrogenase [Corynebacterium accolens ATCC 49726] Length = 987 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLG 192 I + A S ++ +D + CV + C + CPS+ D Sbjct: 516 EGIRISTAQRVNEKAPVHKLSQDNSSLVDAVNRCVGVSACRSDSGSMCPSFQITGDEVHS 575 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + R E + + E L C + C CP ++ Sbjct: 576 TRGRARLLSEMF--RGESISKGFKSKEVNEALDLCLSCKACASECPVNVD 623 >gi|302539772|ref|ZP_07292114.1| oxidoreductase, FAD-binding [Streptomyces hygroscopicus ATCC 53653] gi|302457390|gb|EFL20483.1| oxidoreductase, FAD-binding [Streptomyces himastatinicus ATCC 53653] Length = 951 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 29/107 (27%), Gaps = 9/107 (8%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGPAI 195 L +D CV C T+ CPSY D Sbjct: 507 PHRTPLPLTTVLPFHADDGDFAKATRRCVGVGKCRTAAPGSGVMCPSYRVTRDEKDSTRG 566 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + G R + D L C + C+ CP G++ Sbjct: 567 RARLLYEMTRGEVITDGWRSREVRDA--LDLCLSCKGCSSDCPVGVD 611 >gi|222837010|gb|EEE75403.1| predicted protein [Populus trichocarpa] Length = 484 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 + C CP Y ++ +Y R E + R ++ L Sbjct: 222 AGYMREQVCKYMCP-YARFQSAMFDRDTMIVSYDT---GRGEPRAPRTKKVDYKAQGLGD 277 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 278 CIDCKMCVQVCPVGIDI 294 >gi|160898220|ref|YP_001563802.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] gi|160363804|gb|ABX35417.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] Length = 484 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 + C CP Y ++ +Y R E + R ++ L Sbjct: 222 AGYMREQVCKYMCP-YARFQSAMFDRDTMIVSYDT---GRGEPRAPRTKKVDYKAQGLGD 277 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 278 CIDCKMCVQVCPVGIDI 294 >gi|147677742|ref|YP_001211957.1| NADH:ubiquinone oxidoreductase, subunit RnfC [Pelotomaculum thermopropionicum SI] gi|146273839|dbj|BAF59588.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Pelotomaculum thermopropionicum SI] Length = 320 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 10/131 (7%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWW 185 V + + ++ + + + A E L + E C+ C C C Sbjct: 166 VVADVLLGKEQPVKNYEERFAEVKALEQLSTEEKSAYWDKQFSRCLRCYACRNVCTVCTC 225 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + R + E L + RC C + CP + Sbjct: 226 RECVFDQMKPMWVSKRNNL---SENTAFHL--IRAFHVAGRCVDCGECDRICPVDIPL-- 278 Query: 246 AIAKIKMMLLD 256 K+ +L Sbjct: 279 --RKLNQKILK 287 >gi|15791205|ref|NP_281029.1| hypothetical protein VNG2422G [Halobacterium sp. NRC-1] gi|169236961|ref|YP_001690161.1| oxidoreductase (4Fe-4S iron-sulfur cluster containing) [Halobacterium salinarum R1] gi|10581829|gb|AAG20509.1| glycolate oxidase subunit [Halobacterium sp. NRC-1] gi|167728027|emb|CAP14815.1| putative oxidoreductase (4Fe-4S iron-sulfur cluster containing) [Halobacterium salinarum R1] Length = 1012 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 46/172 (26%), Gaps = 24/172 (13%) Query: 94 GTNTLACVKDMKDIKGAIAV-YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 G + A + K + P P + D + + Sbjct: 534 GEDLWASFRRTKAAFDPDWILNPGP-------VCGDAAGEIDMTDHLRVAPDDEFDAGFD 586 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLI 204 L + C CA C+ CP+Y ++ L R + Sbjct: 587 PALNWDTENGFRGMTELCHGCAGCTGHQDTTGGVMCPTYRAANEETLSTRGRANMLRSAM 646 Query: 205 DSR---DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + D E L + D C C CP G++ AK ++K Sbjct: 647 NGHLPADPLDDEFLTEVLD-----LCVGCKGCKLDCPSGVDMAKLKTEVKHA 693 >gi|14521154|ref|NP_126629.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus abyssi GE5] gi|5458372|emb|CAB49860.1| Sulfhydrogenase II, beta chain [Pyrococcus abyssi GE5] Length = 334 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 20/113 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRW---------LIDSRDEFQ 211 +C+ C C+ CP+ D ++ ++ R+ L+ F+ Sbjct: 222 WRKYADKCLGCGNCTLVCPTCRCYEVCDNWIRAYESVRVRRYDSCFMVTHGLVAGGHNFR 281 Query: 212 GERLDNLE---------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RLD DP + C C + CP G+ K + +++ L+ Sbjct: 282 PTRLDRFRHRYYCKSYFDPSSGFNCVGCGRCDEFCPAGIEHVKVLEEVREGLI 334 >gi|213582925|ref|ZP_03364751.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 456 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 255 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 302 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIK---MMLLDRK 258 C C CP + + I I+ + K Sbjct: 303 ------DCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAK 345 >gi|146276590|ref|YP_001166749.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554831|gb|ABP69444.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 477 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 26/116 (22%), Gaps = 4/116 (3%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + C +CP + Sbjct: 169 WVFYFTDAPTLLVDLVTGNAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAM 228 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 I + W + R + + + + + C M C CP G++ Sbjct: 229 MDEETITVAYREWRGEPRGKLKKG--EPVSEAQG--DCIDCMACVNVCPMGIDIRD 280 >gi|89053654|ref|YP_509105.1| D-lactate dehydrogenase (cytochrome) [Jannaschia sp. CCS1] gi|88863203|gb|ABD54080.1| D-lactate dehydrogenase (cytochrome) [Jannaschia sp. CCS1] Length = 961 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 42/159 (26%), Gaps = 11/159 (6%) Query: 106 DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID 165 P M+ K + + R + Sbjct: 494 FHDVKNRFDPEGLMNPGKIVDPPRMDDRTLFRYAPDYSIAPLKTAFDWSAWPGAGDGFQG 553 Query: 166 GLYECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C C CPSY + R I + D + + Sbjct: 554 AVEMCNNNGACRKLQGGAMCPSYRATKNERDVTRGRANTLRLAISGQLGPDALTSDAMAE 613 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 +L C + C + CP G++ +A++K+ + ++ Sbjct: 614 TMKL--CVSCKACKRECPTGVD----MARMKIEVQAAQV 646 >gi|323699636|ref|ZP_08111548.1| iron-sulfur cluster binding protein [Desulfovibrio sp. ND132] gi|323459568|gb|EGB15433.1| iron-sulfur cluster binding protein [Desulfovibrio desulfuricans ND132] Length = 483 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 21/93 (22%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C CP Y + Y GP A+++ R + D +GE L Sbjct: 311 CIRCGGCLNVCPVYGRIGGHAYNGPYPGPIGAVIMPLIRGVNAHADLCRGESL------- 363 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C CP + + +++++ ML Sbjct: 364 -------CGACKDICPVNNDLPRMLSELRHMLA 389 >gi|294784049|ref|ZP_06749371.1| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium sp. 1_1_41FAA] gi|294479861|gb|EFG27640.1| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium sp. 1_1_41FAA] Length = 435 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L + + +D + + + + K LL + + C+ C Sbjct: 308 YILDYCGINRDEMERLVMGGPMMGLAQMTEEATVVKGTSGLLALTNEEMRPYKTKACISC 367 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D + L C +C Sbjct: 368 SKCVSACPMGLAP---------------LMFDRLAAAKE---YEAMAGHNLMDCIECGSC 409 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A+AI K L +K Sbjct: 410 AYICPANRPLAEAIKTGKAKLRAKK 434 >gi|209363825|ref|YP_001423965.2| NADH dehydrogenase subunit I [Coxiella burnetii Dugway 5J108-111] gi|215919184|ref|NP_820423.2| NADH dehydrogenase subunit I [Coxiella burnetii RSA 493] gi|206584068|gb|AAO90937.2| NADH-quinone oxidoreductase chain I [Coxiella burnetii RSA 493] gi|207081758|gb|ABS78476.2| NADH-quinone oxidoreductase chain I [Coxiella burnetii Dugway 5J108-111] Length = 168 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + +FY + + + R+ +G C+ C C Sbjct: 20 ELLKGLSLTLRYFYR--KKVTIHYPDEEVPSSFRFRGMLALRRYPNGEERCIACKLCEAV 77 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP E G R L D ++C C ++CP Sbjct: 78 CPACAITIEA--GPR--------------EADGSRRTTLYDIDA-FKCINCGFCEEACPV 120 Query: 240 G 240 Sbjct: 121 D 121 >gi|315618815|gb|EFU99398.1| electron transport complex protein rnfC [Escherichia coli 3431] Length = 740 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 449 >gi|284161887|ref|YP_003400510.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus profundus DSM 5631] gi|284011884|gb|ADB57837.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus profundus DSM 5631] Length = 734 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 34/130 (26%), Gaps = 17/130 (13%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + S K E + +CV C CS CP Sbjct: 193 NREILRSNVSIFTSSRVLDVEKVDGNFRVKIEKAPQYIDPDKCVSCGKCSEVCPI----- 247 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 P R ID + RL + + C+ C + CP AI Sbjct: 248 -EVPNPFDFGMTKRKAID-----KDFRLAMPDTYNIVEGCNRCGECVKVCP-----TNAI 296 Query: 248 A-KIKMMLLD 256 K +++ Sbjct: 297 NLDAKAEIVE 306 Score = 35.1 bits (79), Expect = 9.2, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 3/87 (3%) Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY--RCHTI 230 + C++ C + L + + ++D R+ + P + +C + Sbjct: 180 ASVCTSEC-VIPVLNREILRSNVSIFTSSRVLDVEKVDGNFRVKIEKAPQYIDPDKCVSC 238 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C++ CP + K +D+ Sbjct: 239 GKCSEVCPIEVPNPFDFGMTKRKAIDK 265 >gi|154149396|ref|YP_001407139.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter hominis ATCC BAA-381] gi|153805405|gb|ABS52412.1| iron-sulfur cluster-binding domain protein [Campylobacter hominis ATCC BAA-381] Length = 426 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 31/102 (30%), Gaps = 6/102 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 ++ D +CV C C C + N D P L + Sbjct: 1 MSKKNEAKFNFKDISDKCVKCGKCIQVCTIHEINRDEVTSPRGFLDLLGAYQNGDLALDK 60 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D L+ +C NC Q CP L AI + + + Sbjct: 61 NLKDILQ------KCFLCTNCVQVCPNSLPVDFAIEQSRNEI 96 >gi|237731407|ref|ZP_04561888.1| electron transport complex protein RnfC [Citrobacter sp. 30_2] gi|226906946|gb|EEH92864.1| electron transport complex protein RnfC [Citrobacter sp. 30_2] Length = 564 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Sbjct: 367 EMGETPEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATA------- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----------AIAKIKMMLLDRK 258 + C C CP + + AI++ + + K Sbjct: 411 --HNIADCIECGACAWVCPSNIPLVQYFRQEKAEIYAISQEEKRAAEAK 457 >gi|222053341|ref|YP_002535703.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] gi|221562630|gb|ACM18602.1| protein of unknown function DUF224 cysteine-rich region domain protein [Geobacter sp. FRC-32] Length = 390 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C + CP WN R L++ L +E ++RC T Sbjct: 32 CYQCGKCDSVCP---WNRVRTFSMRKLVRQASLG-----------LTEIESED-IWRCST 76 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C Q+CP+G+ ++ ++ + ++ Sbjct: 77 CGRCPQNCPRGVKQIESGVALRRIATQNEV 106 >gi|73538270|ref|YP_298637.1| 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Ralstonia eutropha JMP134] gi|72121607|gb|AAZ63793.1| 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Ralstonia eutropha JMP134] Length = 966 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 43/152 (28%), Gaps = 12/152 (7%) Query: 96 NTLACVKDMKDIKGAIAVY-PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 + + M+ ++ PL M+ K VV+ H R + P Sbjct: 494 PIMYPERLMRAFGRFKQIWDPLNRMNPGK--VVNAWHIDQNLRIGTDYNPPEQPVYFHYT 551 Query: 155 LQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 S + CV C CPSY + + ++ Sbjct: 552 TDSG---SFPRAVLRCVGVGECRKNKGVMCPSYMATGEERHSTRGRARMLFEMLKGEVVQ 608 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + + L C + C CP ++ Sbjct: 609 DGWRSEAVH--EALDLCLSCKGCRGECPVNVD 638 >gi|262171980|ref|ZP_06039658.1| electron transport complex protein RnfC [Vibrio mimicus MB-451] gi|261893056|gb|EEY39042.1| electron transport complex protein RnfC [Vibrio mimicus MB-451] Length = 867 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 18/100 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D C+ C C+ +CP ++L Q +W +++ + E L+ Sbjct: 368 ELTNSDHEMACIRCGQCADACPV-----------SLLPQQLQWHAKAQEFDKCEELN--- 413 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C C CP + + + K + R + Sbjct: 414 ----LKDCIECGACAYVCPSDIPLVQYYRQAKAEIRTRSL 449 >gi|116749239|ref|YP_845926.1| heterodisulfide reductase subunit C [Syntrophobacter fumaroxidans MPOB] gi|116698303|gb|ABK17491.1| heterodisulfide reductase, C subunit [Syntrophobacter fumaroxidans MPOB] Length = 189 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + EC C C+ CP+ + L P +++ R + Sbjct: 15 RAEAAGPFNAAECFQCRKCTNGCPATFAMD---LYPDQVIRLAIL----------GRKEE 61 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C + C+ CP G+ A+ + K + + Sbjct: 62 VLHSKTIWVCASCETCSTRCPNGVRIAELMDYFKELAVR 100 >gi|262165247|ref|ZP_06032984.1| electron transport complex protein RnfC [Vibrio mimicus VM223] gi|262024963|gb|EEY43631.1| electron transport complex protein RnfC [Vibrio mimicus VM223] Length = 825 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 18/100 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D C+ C C+ +CP ++L Q +W +++ + E L+ Sbjct: 368 ELTNSDHEMACIRCGQCADACPV-----------SLLPQQLQWHAKAQEFDKCEELN--- 413 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C C CP + + + K + R + Sbjct: 414 ----LKDCIECGACAYVCPSDIPLVQYYRQAKAEIRTRSL 449 >gi|153215071|ref|ZP_01949788.1| RnfC-related protein [Vibrio cholerae 1587] gi|124114934|gb|EAY33754.1| RnfC-related protein [Vibrio cholerae 1587] Length = 505 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + D + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEDFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|148657956|ref|YP_001278161.1| FAD linked oxidase domain-containing protein [Roseiflexus sp. RS-1] gi|148570066|gb|ABQ92211.1| FAD linked oxidase domain protein [Roseiflexus sp. RS-1] Length = 978 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 31/114 (27%), Gaps = 13/114 (11%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + + P + + + + C C T CPSY D Sbjct: 541 RYGASYHPIQLHTHFRFSDTGGIVGAVELCNGNGLCRKVAGGTMCPSYMVTRDEEHSTRG 600 Query: 196 LLQAYRWL---IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + D R+ + D C CT CP +N + Sbjct: 601 RANALRMVFSGALPLDALTSARMKEVMD-----LCLECKGCTGECPSRVNMTRL 649 >gi|51244960|ref|YP_064844.1| heterodisulfide reductase, subunit E (HdrE) [Desulfotalea psychrophila LSv54] gi|50875997|emb|CAG35837.1| probable heterodisulfide reductase, subunit E (HdrE) [Desulfotalea psychrophila LSv54] Length = 404 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 13/85 (15%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C C+ CS CP + D P + +W + + L ++ Sbjct: 21 LKKCYQCSTCSVMCP---LSKDGKPFPRKEMIWAQWGL----------KEKLIADPDVFL 67 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 CH +CT CP+G P ++ I+ Sbjct: 68 CHQCGDCTAGCPRGAKPGDVLSAIR 92 >gi|297619229|ref|YP_003707334.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein [Methanococcus voltae A3] gi|297378206|gb|ADI36361.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus voltae A3] Length = 376 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 55/225 (24%), Gaps = 23/225 (10%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKD 103 D ++D ++ K L R C C + I LAC Sbjct: 144 FDVVKEEIDKGKFIIELKDGTEKAIKIDELEEEGFGRRENCQRCELKIPRNADLACGNWG 203 Query: 104 MKDIKGAIAVYPLPHMSVIKDL----VVDMSHFYSQHRSIEPWLKT------VSPKPAKE 153 + + + +I+D ++ + I ++ + Sbjct: 204 AEKGWTFVEITSEKGRQLIEDAEKAGYIETKEPAEKAMIIRGKIEQSMIKLGKKLQAKYL 263 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + D + + CV C C CP + + + Sbjct: 264 EEEYPADEKWEEYWDRCVKCYGCRDVCPVCSCKE--------CVLNQDIIEKGMMAPEAS 315 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA----KIKMML 254 + C C CP + +K KI+ L Sbjct: 316 FFQGVRLSHIAMSCINCGQCEDVCPMEIPLSKLFHKSQLKIREAL 360 >gi|78043358|ref|YP_359780.1| putative anaerobic sulfite reductase subunit A [Carboxydothermus hydrogenoformans Z-2901] gi|77995473|gb|ABB14372.1| putative anaerobic sulfite reductase, A subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 342 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 22/118 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS------DRYLGPAILLQAYRWLID---- 205 ++ E +C+ C C+ CP+ +G D Sbjct: 222 ENFELPLWEKWAQKCLGCGICTYVCPTCHCFDINDFNRGDGVGERFRCWDSCMFSDFTRM 281 Query: 206 -----SRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + + D + + C C Q CP+ ++ I+ IK Sbjct: 282 AGGHNPRPTKKERVRNRFMHKLKYHLDRYSIVGCVGCGRCVQRCPENIDIRAIISDIK 339 >gi|294787900|ref|ZP_06753144.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Simonsiella muelleri ATCC 29453] gi|294484193|gb|EFG31876.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Simonsiella muelleri ATCC 29453] Length = 1280 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + D L + Sbjct: 815 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLAEAFLYEEQTRRGVSLKHFDELGNI 874 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP ++ I+ L Sbjct: 875 G--DHCTVCHRCVKPCPVNIDFGDVTVDIRAFL 905 >gi|307728442|ref|YP_003905666.1| FAD linked oxidase domain-containing protein [Burkholderia sp. CCGE1003] gi|307582977|gb|ADN56375.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1003] Length = 1364 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFGDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|323524731|ref|YP_004226884.1| hypothetical protein BC1001_0361 [Burkholderia sp. CCGE1001] gi|323381733|gb|ADX53824.1| Protein of unknown function DUF3683 [Burkholderia sp. CCGE1001] Length = 1364 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFGDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|238028622|ref|YP_002912853.1| FAD linked oxidase domain-containing protein [Burkholderia glumae BGR1] gi|237877816|gb|ACR30149.1| FAD linked oxidase domain protein [Burkholderia glumae BGR1] Length = 1337 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIQHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|238027885|ref|YP_002912116.1| FAD linked oxidase domain-containing protein [Burkholderia glumae BGR1] gi|237877079|gb|ACR29412.1| FAD linked oxidase domain protein [Burkholderia glumae BGR1] Length = 1337 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIQHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|188591174|ref|YP_001795774.1| fad/fmn binding Fe-S oxidoreductase [Cupriavidus taiwanensis LMG 19424] gi|170938068|emb|CAP63052.1| putative FAD/FMN binding Fe-S oxidoreductase [Cupriavidus taiwanensis LMG 19424] Length = 1324 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISVKHWDEFSDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 943 >gi|170691442|ref|ZP_02882607.1| FAD linked oxidase domain protein [Burkholderia graminis C4D1M] gi|170143647|gb|EDT11810.1| FAD linked oxidase domain protein [Burkholderia graminis C4D1M] Length = 1364 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFGDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCVTPCPVKIDFGDVTMNMRNLL 946 >gi|161503264|ref|YP_001570376.1| hypothetical protein SARI_01334 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864611|gb|ABX21234.1| hypothetical protein SARI_01334 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1174 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEVKAINMMSRLEHVEEEKV 782 >gi|113866470|ref|YP_724959.1| dehydrogenase [Ralstonia eutropha H16] gi|113525246|emb|CAJ91591.1| Dehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein) [Ralstonia eutropha H16] Length = 1324 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISVKHWDEFSDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 943 >gi|328469843|gb|EGF40756.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes 220] Length = 962 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|330502370|ref|YP_004379239.1| electron transport complex protein RnfC [Pseudomonas mendocina NK-01] gi|328916656|gb|AEB57487.1| electron transport complex protein RnfC [Pseudomonas mendocina NK-01] Length = 814 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 25/106 (23%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C+ +CP+ ++L Q + ++ E+L Sbjct: 361 AELPPPPPAMPCIRCGECAEACPA-----------SLLPQQLHFFALGQEH---EQLKA- 405 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I +++ L Sbjct: 406 ---HNLFDCIECGACAYVCPSSIPLVQYYRVAKAEIRELEQKQLKA 448 >gi|260779357|ref|ZP_05888249.1| electron transport complex protein RnfC [Vibrio coralliilyticus ATCC BAA-450] gi|260605521|gb|EEX31816.1| electron transport complex protein RnfC [Vibrio coralliilyticus ATCC BAA-450] Length = 923 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ C+ C C+ +CP+ L P L Sbjct: 353 PITKTANCILAPTRKEISPNQYEMACIRCGQCAEACPAS-------LLPQQLQWH----- 400 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + E D E L C C CP + + + K + RK Sbjct: 401 -----AKAEEYDKCE-ELNLKDCIECGACAFVCPSEIPLVQYYRQAKAEMRTRK 448 >gi|120553868|ref|YP_958219.1| electron transport complex, RnfABCDGE type, C subunit [Marinobacter aquaeolei VT8] gi|120323717|gb|ABM18032.1| electron transport complex, RnfABCDGE type, C subunit [Marinobacter aquaeolei VT8] Length = 609 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ +CP + + + E L+ L+ C Sbjct: 368 PCIRCGQCAEACPMELLPQQLFWYSKAG-----------EFEKAEHLN-------LFDCI 409 Query: 229 TIMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 410 ECGACSYVCPSSIPLVQ 426 >gi|308271649|emb|CBX28257.1| hypothetical protein N47_G35810 [uncultured Desulfobacterium sp.] Length = 315 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + L C+ C C +CP + + + +W+ S+DE L Sbjct: 197 YFENLLSGCLRCYACRNACPLCYCPTC-----FVDESNPQWVGKSQDEIDIRTFHFLRAY 251 Query: 222 FRLYRCHTIMNCTQSCPKGL 241 RC C ++CP G+ Sbjct: 252 HCAGRCTDCGACERACPVGI 271 >gi|217978574|ref|YP_002362721.1| protein of unknown function DUF162 [Methylocella silvestris BL2] gi|217503950|gb|ACK51359.1| protein of unknown function DUF162 [Methylocella silvestris BL2] Length = 481 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 21/137 (15%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D+ + + + + ++ R+ I + C+ C C C + Sbjct: 275 DITQYTTFHCGPKQPGDRDGPDEFHIVLVDNGRTRMIREGIKEMLRCLRCGACMNHCVVF 334 Query: 184 -----WWNSDRYLGP--AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 Y GP A + + L SRD C C + Sbjct: 335 NEIGGHAYGGVYPGPMGAAMTPVFDGLKASRDLPSA--------------CTLNGRCQEV 380 Query: 237 CPKGLNPAKAIAKIKMM 253 CP + + + Sbjct: 381 CPVDIPLPAMLRGWREK 397 >gi|76666829|emb|CAJ31206.1| Hdr-like menaquinol-oxidizing enzyme, subunit D [uncultured sulfate-reducing bacterium] Length = 539 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 13/136 (9%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F + + + + R + CV C C+ C + + D Sbjct: 56 FDAADEDWQLPENWKEIIYEGLRDRLKKYRSLQVFMDICVRCGACADKCHFFLGSGDPKN 115 Query: 192 GPAILLQAYRWL----------IDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPK 239 P + + R + + R E + + Y+C C+ CP Sbjct: 116 MPVLRAELLRSVYRKDFTTAGKLLGRLAGGRELTPAVIKEWFYYFYQCTECRRCSVFCPY 175 Query: 240 GLNPAKAIAKIKMMLL 255 G++ A+ I + LL Sbjct: 176 GIDTAE-ITMMGRELL 190 >gi|182412665|ref|YP_001817731.1| FAD linked oxidase domain-containing protein [Opitutus terrae PB90-1] gi|177839879|gb|ACB74131.1| FAD linked oxidase domain protein [Opitutus terrae PB90-1] Length = 1011 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 T CPSY + R ++ RD Q D + + L C + C Sbjct: 581 TMCPSYMATRNERDTTRARANMLRHMLTHPRDPAQPWDSDEIAEVMEL--CISCKGCKSE 638 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP ++ + A+ + D + Sbjct: 639 CPSNVDLTRLKAEWQQHYHDAR 660 >gi|261211947|ref|ZP_05926233.1| electron transport complex protein RnfC [Vibrio sp. RC341] gi|260838555|gb|EEX65206.1| electron transport complex protein RnfC [Vibrio sp. RC341] Length = 825 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 18/100 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + D C+ C C+ +CP ++L Q +W +++ + E L+ Sbjct: 368 ELTNSDHEMACIRCGQCADACPV-----------SLLPQQLQWHAKAQEFDKCEELN--- 413 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L C C CP + + + K + R + Sbjct: 414 ----LKDCIECGACAYVCPSDIPLVQYYRQAKAEIRTRSL 449 >gi|159899734|ref|YP_001545981.1| NADH-quinone oxidoreductase subunit I [Herpetosiphon aurantiacus ATCC 23779] gi|159892773|gb|ABX05853.1| NADH-quinone oxidoreductase, chain I [Herpetosiphon aurantiacus ATCC 23779] Length = 168 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 14/120 (11%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M+ K L + + + ++E V + HE ++ +GL C+ C+ C+ Sbjct: 6 MAYFKGLKTTAKYLFKKPVTVEY--PEVKRPVRERFRGRHELKRFANGLERCIGCSLCAA 63 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y+ P A + R GER + + L RC C +CP Sbjct: 64 ACPA----DAIYVVPGQNDPA-----NPR--SAGERHAAVYEINML-RCIFCGYCEDACP 111 >gi|329898085|ref|ZP_08272294.1| Electron transport complex protein RnfC [gamma proteobacterium IMCC3088] gi|328920957|gb|EGG28382.1| Electron transport complex protein RnfC [gamma proteobacterium IMCC3088] Length = 574 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 22/94 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ CP+ L Q + L D L C Sbjct: 365 PCIRCGHCADVCPASLLPQQ--LYWYAKSQNHEQL----------------DAHNLADCI 406 Query: 229 TIMNCTQSCPKGLNPAK----AIAKIKMMLLDRK 258 C CP L + A A+IK ++++ Sbjct: 407 ECGACAYVCPSALPLVQFYRAAKAEIKEKSIEQR 440 >gi|163119487|ref|YP_079382.2| iron-sulfur binding domain-containing protein [Bacillus licheniformis ATCC 14580] gi|145902994|gb|AAU23744.2| iron-sulfur binding domain containing protein [Bacillus licheniformis ATCC 14580] Length = 985 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 58/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 12 VEMEASEEQTVLQLLNNSSIEVPQICYHPSLGPIETCDTCIVSINGELKRSCSAEVKDGD 71 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + P L + + + + H +++ P K Sbjct: 72 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKVNHQSIPFDQKP 131 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + W D Sbjct: 132 YHKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 189 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 190 ------------SCVSCGHCSTVCP 202 >gi|145591512|ref|YP_001153514.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283280|gb|ABP50862.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 419 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--------DEFQGERLD 216 CV CA C+ SCP Y D++ P + R ++ + G +L Sbjct: 14 HYFENCVGCAACAPSCPYYHV--DKHYAPVEKAEFLREILRKKYTLAGKLFGPLTGAKLP 71 Query: 217 NLEDPFR-----LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E+ FR YRC +C +CP G++ + K++ +L Sbjct: 72 KREEEFRKLIEFAYRCADCGHCYVTCPFGIDSGAMVNKLRQVLF 115 >gi|329576402|gb|EGG57915.1| iron-sulfur cluster-binding family protein [Enterococcus faecalis TX1467] Length = 250 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L ++ L L Sbjct: 72 QCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQ--FGELPYASSL---- 125 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 CT++CP + + + + + ++ D Sbjct: 126 -CGACTETCPVKIPLHELLIEHRKVMTD 152 >gi|308274682|emb|CBX31281.1| hypothetical protein N47_E47930 [uncultured Desulfobacterium sp.] Length = 765 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 D C C C++ CP +S P +L+ +D Sbjct: 374 AAVGDTFMICQQCGTCTSVCPVNLISS---YSPRHILRRLALNN-----ATQNSVDKA-- 423 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ C T C SCP+G++ + ++ Sbjct: 424 ---VWDCFTCNACGASCPRGIDIINVVKAVR 451 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 13/90 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ C CS SCP P + YR+L D L Sbjct: 20 MDMEICMQCGACSASCPLSE---GANPFPR---KIYRYLQLGL-------KDKLLQSSVP 66 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C+ C + CP+G PA+ + + L Sbjct: 67 WLCYYCGECNKECPRGAEPAETMMATRRWL 96 >gi|283796033|ref|ZP_06345186.1| Na(+)-translocating NADH-quinone reductase, A subunit [Clostridium sp. M62/1] gi|291076241|gb|EFE13605.1| Na(+)-translocating NADH-quinone reductase, A subunit [Clostridium sp. M62/1] Length = 441 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 18/103 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +D C+ C C CP + L P +++ + E Sbjct: 355 TFTKDEVAAQEPTPCIRCGRCVDVCPEH-------LVPQLMMSVA-------ERGDLEGF 400 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C +CP +A +++ + + Sbjct: 401 QKLNGME----CVECGCCAFTCPAKRPLTQAFKEMRKAVAASR 439 >gi|149277474|ref|ZP_01883615.1| possible ferrodoxin [Pedobacter sp. BAL39] gi|149231707|gb|EDM37085.1| possible ferrodoxin [Pedobacter sp. BAL39] Length = 462 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 17/92 (18%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP Y Y GP +I + E +L Sbjct: 310 YCIRCGACLNACPVYKNIGGHTYDTTYSGPIGS------IITPHLKGMKE-FKHLSYASS 362 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C++ CP ++ K + + Sbjct: 363 L-----CGKCSEVCPAKIDIHKMLLLNRRDAA 389 >gi|117920614|ref|YP_869806.1| electron transport complex protein RnfC [Shewanella sp. ANA-3] gi|117612946|gb|ABK48400.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella sp. ANA-3] Length = 788 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ L P L + E D + L C Sbjct: 378 CIRCGECANACPAL-------LLPQQLFWH----------AKAEEYDKAA-SYNLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 420 CGCCSYVCPSDIPLVE 435 >gi|74316360|ref|YP_314100.1| iron-sulfur cluster-binding protein [Thiobacillus denitrificans ATCC 25259] gi|74055855|gb|AAZ96295.1| iron-sulfur cluster-binding protein [Thiobacillus denitrificans ATCC 25259] Length = 478 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 4/89 (4%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 + C+ CP + S Y + R +R G+R Sbjct: 203 YAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDARRGEGTRGRAPARAGQRTLAERH 262 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + C C Q CP G++ + Sbjct: 263 EKGVGDCVDCGLCVQVCPVGIDIRDGLQY 291 >gi|24374054|ref|NP_718097.1| electron transport complex protein RnfC [Shewanella oneidensis MR-1] gi|24348529|gb|AAN55541.1|AE015693_3 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 790 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ L P L + E D + L C Sbjct: 379 CIRCGECANACPAL-------LLPQQLFWH----------AKAEEYDKAA-SYNLKDCIE 420 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 421 CGCCSYVCPSDIPLVE 436 >gi|113970403|ref|YP_734196.1| electron transport complex protein RnfC [Shewanella sp. MR-4] gi|113885087|gb|ABI39139.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella sp. MR-4] Length = 809 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ L P L + E D + L C Sbjct: 378 CIRCGECANACPAL-------LLPQQLFWH----------AKAEEYDKAA-SYNLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 420 CGCCSYVCPSDIPLVE 435 >gi|114047405|ref|YP_737955.1| electron transport complex protein RnfC [Shewanella sp. MR-7] gi|113888847|gb|ABI42898.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella sp. MR-7] Length = 799 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ L P L + E D + L C Sbjct: 378 CIRCGECANACPAL-------LLPQQLFWH----------AKAEEYDKAA-SYNLKDCIE 419 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 420 CGCCSYVCPSDIPLVE 435 >gi|292492467|ref|YP_003527906.1| formate dehydrogenase, subunit alpha [Nitrosococcus halophilus Nc4] gi|291581062|gb|ADE15519.1| formate dehydrogenase, alpha subunit [Nitrosococcus halophilus Nc4] Length = 936 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 65/225 (28%), Gaps = 39/225 (17%) Query: 36 NPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNK---IDPTLTLRRSCR-EGICGSCGMN 91 NP+ + ++ ++ + +L + + + P L + S R +G C +C + Sbjct: 4 NPEVLQEGELISFKLNGRKMSAQPGETILQVAKRNGVLIPHLCYQESMRPDGNCRACMVE 63 Query: 92 IDGTNTLACVK--------------DMKDIKGAIAVYPLPHMSVIK--DLVVDMSHFYSQ 135 I G LA + + L K L ++ H+ + Sbjct: 64 IKGERVLAPSCCRQPSEGMEVETDNQRARHSQKMVLELLLSDMPEKAYTLHSELDHWARE 123 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 R P PA L C+ C C +C N +G A Sbjct: 124 LRLGPPRFSARKQAPADLSHP-----AMAVNLDACIQCTRCVRACREEQVND--VIGYAF 176 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D DP C C Q+CP G Sbjct: 177 RGPHSTIVFD------------QGDPMGESTCVACGECVQACPTG 209 >gi|237736243|ref|ZP_04566724.1| heterodisulfide reductase [Fusobacterium mortiferum ATCC 9817] gi|229421591|gb|EEO36638.1| heterodisulfide reductase [Fusobacterium mortiferum ATCC 9817] Length = 137 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C CS SCP+ + Q R+L Q L+++++ ++ C Sbjct: 27 ANCMQCGKCSASCPATDGMD------ILPHQIIRYL-------QMGDLESVKNSKTIWTC 73 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + NC CP+ ++ K + +++ ++ +K Sbjct: 74 ASCFNCASRCPRNVDLCKLMEAVRLTIIRKK 104 >gi|149378172|ref|ZP_01895889.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Marinobacter algicola DG893] gi|149357534|gb|EDM46039.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Marinobacter algicola DG893] Length = 612 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP +L Q W S + + E L+ L+ C Sbjct: 368 PCIRCSMCAEACP-----------MELLPQQLFWYSKSGELDKVEHLN-------LFDCI 409 Query: 229 TIMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 410 ECGACSYVCPSSIPLVQ 426 >gi|149197566|ref|ZP_01874617.1| D-lactate dehydrogenase, putative [Lentisphaera araneosa HTCC2155] gi|149139584|gb|EDM27986.1| D-lactate dehydrogenase, putative [Lentisphaera araneosa HTCC2155] Length = 895 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 9/87 (10%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C ++CPS D L P + +R + R E G + F+ Sbjct: 532 DQCIECGFCESACPS----KDLTLSPRQRIAVWREIK--RQENAGVGIKPWLSEFQYQAN 585 Query: 228 HTI---MNCTQSCPKGLNPAKAIAKIK 251 T C CP ++ K I +++ Sbjct: 586 DTCAADGMCATKCPVDIDTGKLIKQLR 612 >gi|108800385|ref|YP_640582.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119869514|ref|YP_939466.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126436008|ref|YP_001071699.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108770804|gb|ABG09526.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119695603|gb|ABL92676.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126235808|gb|ABN99208.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 352 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 25/121 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPS---------------------YWWNSDRYLGP 193 + S E Q + C+ C C+ CP+ +W + + Sbjct: 226 IDSRESPQWEEVAGRCLTCGNCTMVCPTCFCTSVEDVTDLSGEHAERWMHWASCFEFDFT 285 Query: 194 AILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + + R SR + +L + D F C C CP G++ + ++ Sbjct: 286 FVHEGSTRQTASSRYRHWLTHKLGSWHDQFGSSGCVGCGRCIAWCPTGIDITE---EMNR 342 Query: 253 M 253 M Sbjct: 343 M 343 >gi|327252745|gb|EGE64399.1| electron transport complex protein rnfC [Escherichia coli STEC_7v] Length = 633 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 25/92 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C+ +CP+ Y D+ + C Sbjct: 269 NCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCI 310 Query: 229 TIMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 311 ECGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 342 >gi|307596196|ref|YP_003902513.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551397|gb|ADN51462.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 468 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 12/109 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-----IDSRDEFQGER 214 +R + CV C C T+CP+Y D P + R + + + Sbjct: 60 NRNVKLAVETCVHCGACLTACPTYITTGDIRNSPVGRAELIRAVIKAEKPSGKLLGKAVN 119 Query: 215 LDNLEDPFRL-------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 D L ++C C CP G++ A ++ +L + Sbjct: 120 AVKAIDENYLEMLYTYYWQCLLCRKCATICPFGVDQASLTRTVRSILYE 168 >gi|262402646|ref|ZP_06079207.1| electron transport complex protein RnfC [Vibrio sp. RC586] gi|262351428|gb|EEZ00561.1| electron transport complex protein RnfC [Vibrio sp. RC586] Length = 830 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W +++ + E L+ L C Sbjct: 378 CIRCGQCADACPV-----------SLLPQQLQWHAKAQEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSDIPLVQYYRQAKAEIRTRSL 449 >gi|146306434|ref|YP_001186899.1| electron transport complex protein RnfC [Pseudomonas mendocina ymp] gi|145574635|gb|ABP84167.1| electron transport complex, RnfABCDGE type, C subunit [Pseudomonas mendocina ymp] Length = 944 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ +CP+ ++L Q + ++ E+L Sbjct: 362 ELPPPPPAMPCIRCGECAEACPA-----------SLLPQQLHFFALGQEH---EQLKA-- 405 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I +++ L Sbjct: 406 --HNLFDCIECGACAYVCPSSIPLVQYYRAAKAEIRELEQKQLKA 448 >gi|323247769|gb|EGA31709.1| electron transport complex protein RnfC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 447 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C+ C+ +CP+ Y D+ + Sbjct: 367 EMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKG---------QQHDKATAHHIA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 415 ------DCIECGACAWVCPSNIPLVQ 434 >gi|296330667|ref|ZP_06873144.1| iron-sulfur binding domain-containing protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673923|ref|YP_003865595.1| iron-sulfur binding domain-containing protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296152131|gb|EFG93003.1| iron-sulfur binding domain-containing protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412167|gb|ADM37286.1| iron-sulfur binding domain-containing protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 985 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 58/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 12 VEMEASEEQTVLQLLNNSSIEVPQVCYHPSLGPIETCDTCIVSINGELKRSCSAELKDGD 71 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + P L + + + + H +++ P + Sbjct: 72 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDQKP 131 Query: 156 QSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ +C++C C +C + W D Sbjct: 132 YHKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 189 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 190 ------------SCVSCGHCSTVCP 202 >gi|330818299|ref|YP_004362004.1| FAD linked oxidase domain protein [Burkholderia gladioli BSR3] gi|327370692|gb|AEA62048.1| FAD linked oxidase domain protein [Burkholderia gladioli BSR3] Length = 1337 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|325523404|gb|EGD01733.1| FAD/FMN-containing dehydrogenase [Burkholderia sp. TJI49] Length = 1339 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|253682064|ref|ZP_04862861.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum D str. 1873] gi|253561776|gb|EES91228.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum D str. 1873] Length = 439 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ C C +CP +L P+ L R + Sbjct: 355 EKQAVLPDESSCIRCGRCVKACPM-------FLIPSTLDSVGRRNE----------YEEF 397 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E L C +CT CP + ++I K +L K Sbjct: 398 EANHGL-DCIECGSCTFVCPAKRHLIQSIRTSKRTVLANK 436 >gi|237810867|ref|YP_002895318.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei MSHR346] gi|237505727|gb|ACQ98045.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei MSHR346] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|221200063|ref|ZP_03573106.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD2M] gi|221206784|ref|ZP_03579796.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD2] gi|221173439|gb|EEE05874.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD2] gi|221180302|gb|EEE12706.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD2M] Length = 1344 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|206559263|ref|YP_002230024.1| putative oxidoreductase [Burkholderia cenocepacia J2315] gi|198035301|emb|CAR51176.1| putative oxidoreductase [Burkholderia cenocepacia J2315] Length = 1341 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|170699657|ref|ZP_02890694.1| FAD linked oxidase domain protein [Burkholderia ambifaria IOP40-10] gi|170135413|gb|EDT03704.1| FAD linked oxidase domain protein [Burkholderia ambifaria IOP40-10] Length = 1340 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167917590|ref|ZP_02504681.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei BCC215] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167909577|ref|ZP_02496668.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 112] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167835460|ref|ZP_02462343.1| oxidoreductase, FAD-binding protein [Burkholderia thailandensis MSMB43] Length = 1359 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 873 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 932 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 933 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 963 >gi|167737164|ref|ZP_02409938.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 14] gi|217419533|ref|ZP_03451039.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 576] gi|217396837|gb|EEC36853.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 576] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167718134|ref|ZP_02401370.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei DM98] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167617930|ref|ZP_02386561.1| oxidoreductase, FAD-binding protein [Burkholderia thailandensis Bt4] gi|257140231|ref|ZP_05588493.1| oxidoreductase, FAD-binding protein [Burkholderia thailandensis E264] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167585471|ref|ZP_02377859.1| FAD linked oxidase domain protein [Burkholderia ubonensis Bu] Length = 1339 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167579856|ref|ZP_02372730.1| oxidoreductase, FAD-binding protein [Burkholderia thailandensis TXDOH] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167568813|ref|ZP_02361687.1| oxidoreductase, FAD-binding protein [Burkholderia oklahomensis C6786] Length = 1339 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|167561577|ref|ZP_02354493.1| oxidoreductase, FAD-binding protein [Burkholderia oklahomensis EO147] Length = 1339 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|134296932|ref|YP_001120667.1| FAD linked oxidase domain-containing protein [Burkholderia vietnamiensis G4] gi|134140089|gb|ABO55832.1| FAD linked oxidase domain protein [Burkholderia vietnamiensis G4] Length = 1339 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|319426525|gb|ADV54599.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella putrefaciens 200] Length = 793 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 40/152 (26%), Gaps = 25/152 (16%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L ++ + P + + ++ + Sbjct: 310 GNYWLPIGTPVEHVLMQTEFKPEAEQKI-----IVGGPMMGH--ALPTINVPILKGTNCI 362 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L+ S+++ C+ C C+ CP+ L P L + E Sbjct: 363 LVPSNQEIGVTPEEKACIRCGECANVCPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D F L C C+ CP + + Sbjct: 406 EYDKAA-SFNLKDCIECGCCSYVCPSDIPLVE 436 >gi|161523744|ref|YP_001578756.1| FAD linked oxidase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351495|ref|YP_001947123.1| FAD/FMN-containing dehydrogenase [Burkholderia multivorans ATCC 17616] gi|221211245|ref|ZP_03584224.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD1] gi|160341173|gb|ABX14259.1| FAD linked oxidase domain protein [Burkholderia multivorans ATCC 17616] gi|189335517|dbj|BAG44587.1| FAD/FMN-containing dehydrogenase [Burkholderia multivorans ATCC 17616] gi|221168606|gb|EEE01074.1| oxidoreductase, FAD-binding [Burkholderia multivorans CGD1] Length = 1344 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|172061694|ref|YP_001809346.1| FAD linked oxidase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171994211|gb|ACB65130.1| FAD linked oxidase domain protein [Burkholderia ambifaria MC40-6] Length = 1340 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|83719826|ref|YP_441107.1| FAD-binding oxidoreductase [Burkholderia thailandensis E264] gi|83653651|gb|ABC37714.1| oxidoreductase, FAD-binding [Burkholderia thailandensis E264] Length = 1359 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 873 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 932 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 933 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 963 >gi|78067531|ref|YP_370300.1| hypothetical protein Bcep18194_A6062 [Burkholderia sp. 383] gi|77968276|gb|ABB09656.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 1341 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|56698344|ref|YP_168717.1| iron-sulfur-binding protein RdxA/RdxB/FixG family [Ruegeria pomeroyi DSS-3] gi|56680081|gb|AAV96747.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Ruegeria pomeroyi DSS-3] Length = 475 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + +++ W + R + + + L C M C Sbjct: 215 CIYACPWPRIQAAMMDEDTLVVGYREWRGEPRGKGKR------TEDSELGDCIDCMACVN 268 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 269 VCPVGIDIRD 278 >gi|161830697|ref|YP_001597284.1| NADH dehydrogenase subunit I [Coxiella burnetii RSA 331] gi|81722524|sp|Q83BR3|NUOI_COXBU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|189030927|sp|A9KBL3|NUOI_COXBN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|189030928|sp|A9N8W4|NUOI_COXBR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|161762564|gb|ABX78206.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii RSA 331] Length = 163 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + +FY + + + R+ +G C+ C C Sbjct: 15 ELLKGLSLTLRYFYR--KKVTIHYPDEEVPSSFRFRGMLALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP E G R L D ++C C ++CP Sbjct: 73 CPACAITIEA--GPR--------------EADGSRRTTLYDIDA-FKCINCGFCEEACPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|53718277|ref|YP_107263.1| putative oxidoreductase [Burkholderia pseudomallei K96243] gi|52208691|emb|CAH34627.1| putative oxidoreductase [Burkholderia pseudomallei K96243] Length = 1359 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 873 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 932 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 933 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 963 >gi|254251429|ref|ZP_04944747.1| FAD/FMN-containing dehydrogenases [Burkholderia dolosa AUO158] gi|124894038|gb|EAY67918.1| FAD/FMN-containing dehydrogenases [Burkholderia dolosa AUO158] Length = 1344 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|120598969|ref|YP_963543.1| electron transport complex protein RnfC [Shewanella sp. W3-18-1] gi|120559062|gb|ABM24989.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella sp. W3-18-1] Length = 793 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 40/152 (26%), Gaps = 25/152 (16%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G L ++ + P + + ++ + Sbjct: 310 GNYWLPIGTPVEHVLMQTEFKPEAEQKI-----IVGGPMMGH--ALPTINVPILKGTNCI 362 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L+ S+++ C+ C C+ CP+ L P L + E Sbjct: 363 LVPSNQEIGVTPEEKACIRCGECANVCPAL-------LLPQQLFWH----------AKAE 405 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D F L C C+ CP + + Sbjct: 406 EYDKAA-SFNLKDCIECGCCSYVCPSDIPLVE 436 >gi|126453798|ref|YP_001064962.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1106a] gi|167844348|ref|ZP_02469856.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei B7210] gi|242314776|ref|ZP_04813792.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1106b] gi|126227440|gb|ABN90980.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1106a] gi|242138015|gb|EES24417.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1106b] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|115352837|ref|YP_774676.1| FAD linked oxidase domain-containing protein [Burkholderia ambifaria AMMD] gi|115282825|gb|ABI88342.1| FAD linked oxidase domain protein [Burkholderia ambifaria AMMD] Length = 1340 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|254196456|ref|ZP_04902880.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei S13] gi|169653199|gb|EDS85892.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei S13] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|76808607|ref|YP_332255.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1710b] gi|126440911|ref|YP_001057716.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 668] gi|134279762|ref|ZP_01766474.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 305] gi|167814297|ref|ZP_02445977.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 91] gi|167822772|ref|ZP_02454243.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 9] gi|167892860|ref|ZP_02480262.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 7894] gi|167901346|ref|ZP_02488551.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei NCTC 13177] gi|226196652|ref|ZP_03792232.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei Pakistan 9] gi|254187712|ref|ZP_04894224.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei Pasteur 52237] gi|254260148|ref|ZP_04951202.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1710a] gi|254296177|ref|ZP_04963634.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 406e] gi|76578060|gb|ABA47535.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1710b] gi|126220404|gb|ABN83910.1| oxidoreductase, FAD-binding protein [Burkholderia pseudomallei 668] gi|134248962|gb|EBA49044.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 305] gi|157805966|gb|EDO83136.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 406e] gi|157935392|gb|EDO91062.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei Pasteur 52237] gi|225931183|gb|EEH27190.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei Pakistan 9] gi|254218837|gb|EET08221.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1710a] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|254181782|ref|ZP_04888379.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1655] gi|184212320|gb|EDU09363.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei 1655] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|107023670|ref|YP_621997.1| FAD linked oxidase-like [Burkholderia cenocepacia AU 1054] gi|116690755|ref|YP_836378.1| FAD linked oxidase domain-containing protein [Burkholderia cenocepacia HI2424] gi|170734097|ref|YP_001766044.1| FAD linked oxidase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|254247233|ref|ZP_04940554.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gi|105893859|gb|ABF77024.1| FAD linked oxidase-like protein [Burkholderia cenocepacia AU 1054] gi|116648844|gb|ABK09485.1| FAD linked oxidase domain protein [Burkholderia cenocepacia HI2424] gi|124872009|gb|EAY63725.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gi|169817339|gb|ACA91922.1| FAD linked oxidase domain protein [Burkholderia cenocepacia MC0-3] Length = 1341 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|53724988|ref|YP_102022.1| FAD-binding oxidoreductase [Burkholderia mallei ATCC 23344] gi|67642489|ref|ZP_00441245.1| oxidoreductase, FAD-binding [Burkholderia mallei GB8 horse 4] gi|121601440|ref|YP_994059.1| oxidoreductase, FAD-binding [Burkholderia mallei SAVP1] gi|124384892|ref|YP_001028277.1| oxidoreductase, FAD-binding [Burkholderia mallei NCTC 10229] gi|126450719|ref|YP_001081921.1| oxidoreductase, FAD-binding [Burkholderia mallei NCTC 10247] gi|167001922|ref|ZP_02267712.1| oxidoreductase, FAD-binding [Burkholderia mallei PRL-20] gi|254177026|ref|ZP_04883683.1| oxidoreductase, FAD-binding [Burkholderia mallei ATCC 10399] gi|254203703|ref|ZP_04910063.1| oxidoreductase, FAD-binding [Burkholderia mallei FMH] gi|254208678|ref|ZP_04915026.1| oxidoreductase, FAD-binding [Burkholderia mallei JHU] gi|254360266|ref|ZP_04976536.1| oxidoreductase, FAD-binding [Burkholderia mallei 2002721280] gi|52428411|gb|AAU49004.1| oxidoreductase, FAD-binding [Burkholderia mallei ATCC 23344] gi|121230250|gb|ABM52768.1| oxidoreductase, FAD-binding [Burkholderia mallei SAVP1] gi|124292912|gb|ABN02181.1| oxidoreductase, FAD-binding protein [Burkholderia mallei NCTC 10229] gi|126243589|gb|ABO06682.1| oxidoreductase, FAD-binding protein [Burkholderia mallei NCTC 10247] gi|147745215|gb|EDK52295.1| oxidoreductase, FAD-binding [Burkholderia mallei FMH] gi|147750554|gb|EDK57623.1| oxidoreductase, FAD-binding [Burkholderia mallei JHU] gi|148029506|gb|EDK87411.1| oxidoreductase, FAD-binding [Burkholderia mallei 2002721280] gi|160698067|gb|EDP88037.1| oxidoreductase, FAD-binding [Burkholderia mallei ATCC 10399] gi|238523653|gb|EEP87090.1| oxidoreductase, FAD-binding [Burkholderia mallei GB8 horse 4] gi|243062332|gb|EES44518.1| oxidoreductase, FAD-binding [Burkholderia mallei PRL-20] Length = 1342 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 856 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 915 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 916 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 946 >gi|257456864|ref|ZP_05622045.1| nitrogen fixation protein [Treponema vincentii ATCC 35580] gi|257445573|gb|EEV20635.1| nitrogen fixation protein [Treponema vincentii ATCC 35580] Length = 425 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 28/89 (31%), Gaps = 18/89 (20%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D L EC C C SCP+Y ID+ Q +R D Sbjct: 343 KDIDIQQQLEECGHCGQCLRSCPAYIDP-----------------IDTVRRIQKKRYDA- 384 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 E + C C+ CP + I Sbjct: 385 ETMRSIALCSGCGCCSAVCPVRIPLRTII 413 >gi|167630080|ref|YP_001680579.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167592820|gb|ABZ84568.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 337 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 22/123 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRWL---------- 203 Q + +C+ C C+ CP+ D+ ++ W Sbjct: 214 QMFDHPLWDALSRKCLNCGACAYICPTCHCFDISDKKRNAHCGVKIKCWDTCMYSEYALM 273 Query: 204 ---IDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + R + +C C CP L I +++ Sbjct: 274 AGGHNPRPSKKERVRQRFMHKLRYFPERYGKLQCTGCGRCIAKCPVNLEITDVIQQVREA 333 Query: 254 LLD 256 +D Sbjct: 334 KID 336 >gi|158521235|ref|YP_001529105.1| hypothetical protein Dole_1222 [Desulfococcus oleovorans Hxd3] gi|158510061|gb|ABW67028.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfococcus oleovorans Hxd3] Length = 432 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 6/88 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C +CP + + + ++ L L+ C Sbjct: 19 AVCKNCGTCQAACPLFPHTGMEKDIARGKIALLKGVMSEVVTNADTVLKRLD------NC 72 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C CP ++ + + ++ Sbjct: 73 LLCGACKSVCPNRVDTLQIFLSARSLMA 100 >gi|27367730|ref|NP_763257.1| formate dehydrogenase subunit alpha [Vibrio vulnificus CMCP6] gi|27359302|gb|AAO08247.1| formate dehydrogenase, alpha subunit [Vibrio vulnificus CMCP6] Length = 1399 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 8/107 (7%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGP 193 +S + W P + H + C+ C C +C ++ Sbjct: 600 NIKSHDEWQALRQNDPRHKYPIDHSSEFIVFDANRCISCGQCIQACREQSVQGVLSFMNL 659 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R D R F G+ + + RC C Q+CP G Sbjct: 660 EKGRPVVR--PDCRPNFGGQGVRMGDS-----RCVQCGACVQACPVG 699 >gi|332968226|gb|EGK07303.1| NADH-quinone oxidoreductase subunit I [Kingella kingae ATCC 23330] Length = 159 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+++ +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFARKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ N + + R+ ID L +C C ++CP Sbjct: 70 CPAMAINIESEQREDGTRRTTRYDID------------------LTKCIFCGFCEEACP- 110 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 111 ----TDAIVE 116 >gi|256829504|ref|YP_003158232.1| FAD linked oxidase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578680|gb|ACU89816.1| FAD linked oxidase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 937 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 25/100 (25%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DP 221 + CV C C CPS P + A+R + RL+ E D Sbjct: 535 HPKIDMCVDCGFCEPVCPSRHIA----FTPRQRIAAWREI---------TRLEQAEFYDE 581 Query: 222 FRLYR----------CHTIMNCTQSCPKGLNPAKAIAKIK 251 +R C T CT CP ++ A I ++ Sbjct: 582 ASTWRAAFTELGESTCATDGLCTTRCPLAIDVASFIRDLR 621 >gi|237653892|ref|YP_002890206.1| electron transport complex protein RnfC [Thauera sp. MZ1T] gi|237625139|gb|ACR01829.1| electron transport complex, RnfABCDGE type, C subunit [Thauera sp. MZ1T] Length = 573 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ +CP + Y W S++ + + + L+ C Sbjct: 368 PCIRCTECAKACPVELQPFELY-----------WFSRSKNFGKAQ-------EYHLFDCI 409 Query: 229 TIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 410 ECGCCAYVCPSHIPLVD 426 >gi|34558057|ref|NP_907872.1| ferredoxin-type oxidoreductase [Wolinella succinogenes DSM 1740] gi|34483775|emb|CAE10772.1| FERREDOXIN-TYPE OXIDOREDUCTASE [Wolinella succinogenes] Length = 427 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV C C SC Y + D P + E D Sbjct: 4 FNYQQTSQSCVKCGKCIPSCTIYNIHPDEVTSPRGFIDLLGAYQRGELELDKNAKDI--- 60 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +C NCT CP L + I ++ + + Sbjct: 61 ---FEKCFLCTNCTYVCPNLLPTDQVIENVRAEIAQK 94 >gi|328952396|ref|YP_004369730.1| heterodisulfide reductase, C subunit [Desulfobacca acetoxidans DSM 11109] gi|328452720|gb|AEB08549.1| heterodisulfide reductase, C subunit [Desulfobacca acetoxidans DSM 11109] Length = 195 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 13/96 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + + +C C CS+ CP + + Q R + D + Sbjct: 21 QDRHIAVTDCYQCTKCSSGCPLTFAMD------LLPHQIIRLSALGQ-------KDLVLS 67 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 ++ C CT CP ++ A + +K + Sbjct: 68 SNTIWVCSACETCTTRCPNDIDIAGVMDYLKEQAVK 103 >gi|319652053|ref|ZP_08006173.1| YjgC protein [Bacillus sp. 2_A_57_CT2] gi|317396201|gb|EFV76919.1| YjgC protein [Bacillus sp. 2_A_57_CT2] Length = 988 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 49/183 (26%), Gaps = 30/183 (16%) Query: 72 PTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP-------------LP 117 P + S C +C ++++G +C +KD V P L Sbjct: 37 PQVCFHPSLGAIETCDTCIVSVNGELVRSCSTKIKDGDVIDTVDPDVKQAQTIAMDKILF 96 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCAC 175 + + + + H +++ P + ++ +C++C Sbjct: 97 NHELYCTVCDYNNGGCEIHNTVKAMKINHQSIPFDQKPYEKDESHPFYRYDPDQCILCGR 156 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +C + W D C + +C+ Sbjct: 157 CVEACQDVQVTETLTIDWERERPRVIWDNDVPINES--------------SCVSCGHCST 202 Query: 236 SCP 238 CP Sbjct: 203 VCP 205 >gi|307298643|ref|ZP_07578446.1| electron transport complex, RnfABCDGE type, C subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306915808|gb|EFN46192.1| electron transport complex, RnfABCDGE type, C subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 439 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+T CP LQ + + RL + + L C Sbjct: 363 PCIRCGKCATVCPM-------------NLQPFLLNLYG-----TNRLYDKQVENGLLDCI 404 Query: 229 TIMNCTQSCPKGLNPAK 245 +C+ CP + K Sbjct: 405 ECGSCSYVCPANIELVK 421 Score = 35.9 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 9/24 (37%) Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 DP + C C CP L P Sbjct: 357 DPLEEFPCIRCGKCATVCPMNLQP 380 >gi|294676711|ref|YP_003577326.1| cbb3-type cytochrome c oxidase accessory protein CcoG [Rhodobacter capsulatus SB 1003] gi|294475531|gb|ADE84919.1| cytochrome c oxidase, Cbb3-type, accessory protein CcoG [Rhodobacter capsulatus SB 1003] Length = 486 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 4/74 (5%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C +CP + I + W + R + Q C Sbjct: 211 FAREQMCIYACPWPRIQAAMMDEDTITIAYREWRGEPRGKLQKNEKLA----EGQGDCID 266 Query: 230 IMNCTQSCPKGLNP 243 M C CP G++ Sbjct: 267 CMACVNVCPMGIDI 280 >gi|256830026|ref|YP_003158754.1| D-lactate dehydrogenase (cytochrome) [Desulfomicrobium baculatum DSM 4028] gi|256579202|gb|ACU90338.1| D-lactate dehydrogenase (cytochrome) [Desulfomicrobium baculatum DSM 4028] Length = 937 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--IDSRDEFQGERLDNLE-- 219 + + +C+ C C CPS L P + ++R + + + E + E L+ Sbjct: 536 HELVDKCIECGFCEPICPSKHIT----LSPRQRITSWREIQRLQGKPEHKTELAKLLKAY 591 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C T C CP G++ K ++ Sbjct: 592 GYQGDGTCATDGLCGTRCPVGIDTGKMTKALRAE 625 >gi|258452643|ref|ZP_05700644.1| formate dehydrogenase [Staphylococcus aureus A5948] gi|257859680|gb|EEV82527.1| formate dehydrogenase [Staphylococcus aureus A5948] Length = 715 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P++ S C +C + IDG Sbjct: 1 MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL- 143 +C + V L + + + H +++ W Sbjct: 61 RSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGL 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|224500458|ref|ZP_03668807.1| hypothetical protein LmonF1_12634 [Listeria monocytogenes Finland 1988] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|16804624|ref|NP_466109.1| hypothetical protein lmo2586 [Listeria monocytogenes EGD-e] gi|224503621|ref|ZP_03671928.1| hypothetical protein LmonFR_14143 [Listeria monocytogenes FSL R2-561] gi|16412074|emb|CAD00664.1| lmo2586 [Listeria monocytogenes EGD-e] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|332526264|ref|ZP_08402393.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] gi|332110098|gb|EGJ10726.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] Length = 496 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 3/85 (3%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 G + C CP + S + +++ D R + L Sbjct: 224 WGNAGYMREQVCKYMCPYARFQSAMFDKDTLIVSYDAERGDPRGTRSRKVDAR---SQGL 280 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 281 GDCIDCGLCVQVCPTGIDIRDGLQY 305 >gi|320158008|ref|YP_004190386.1| anaerobic dehydrogenase [Vibrio vulnificus MO6-24/O] gi|319933320|gb|ADV88183.1| anaerobic dehydrogenase [Vibrio vulnificus MO6-24/O] Length = 1399 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 8/107 (7%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGP 193 +S + W P + H + C+ C C +C ++ Sbjct: 600 NIKSHDEWQALRQNDPRHKYPIDHSSEFIVFDANRCISCGQCIQACREQSVQGVLSFMNL 659 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R D R F G+ + + RC C Q+CP G Sbjct: 660 EKGRPVVR--PDCRPNFGGQGVRMGDS-----RCVQCGACVQACPVG 699 >gi|284803026|ref|YP_003414891.1| hypothetical protein LM5578_2783 [Listeria monocytogenes 08-5578] gi|284996167|ref|YP_003417935.1| hypothetical protein LM5923_2732 [Listeria monocytogenes 08-5923] gi|284058588|gb|ADB69529.1| hypothetical protein LM5578_2783 [Listeria monocytogenes 08-5578] gi|284061634|gb|ADB72573.1| hypothetical protein LM5923_2732 [Listeria monocytogenes 08-5923] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|254829511|ref|ZP_05234198.1| formate dehydrogenase [Listeria monocytogenes FSL N3-165] gi|258601926|gb|EEW15251.1| formate dehydrogenase [Listeria monocytogenes FSL N3-165] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|158520323|ref|YP_001528193.1| electron transport complex, RnfABCDGE type, C subunit [Desulfococcus oleovorans Hxd3] gi|158509149|gb|ABW66116.1| electron transport complex, RnfABCDGE type, C subunit [Desulfococcus oleovorans Hxd3] Length = 454 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D K CV C C CP L P+ L A R +++ ER + Sbjct: 372 DDVKKAEETACVRCGRCVDVCPLN-------LVPSKLAVASR----NKNLEVAERYN--- 417 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++ C C +CP L + I K ++ Sbjct: 418 ----IFTCLECGCCAYTCPASLPLVQLIRMGKAAIM 449 >gi|37675860|ref|NP_936256.1| anaerobic dehydrogenase [Vibrio vulnificus YJ016] gi|37200399|dbj|BAC96226.1| anaerobic dehydrogenase [Vibrio vulnificus YJ016] Length = 1399 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 8/107 (7%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGP 193 +S + W P + H + C+ C C +C ++ Sbjct: 600 NIKSHDEWQALRQNDPRHKYPIDHSSEFIVFDANRCISCGQCIQACREQSVQGVLSFMNL 659 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R D R F G+ + + RC C Q+CP G Sbjct: 660 EKGRPVVR--PDCRPNFGGQGVRMGDS-----RCVQCGACVQACPVG 699 >gi|126740147|ref|ZP_01755836.1| formate dehydrogenase, alpha subunit [Roseobacter sp. SK209-2-6] gi|126718602|gb|EBA15315.1| formate dehydrogenase, alpha subunit [Roseobacter sp. SK209-2-6] Length = 924 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 47/177 (26%), Gaps = 34/177 (19%) Query: 82 EGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + V P + Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPSEGMVVTTNNTRATSARKMVMELLVADQPKQEEAR 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D + + E + L L C+ C C +C Sbjct: 107 DKSSHLWDMAELNGVSESRFPKLEEGRIP--LLDDSHVAMKVNLDACISCNLCVRACREV 164 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP C C Q+CP G Sbjct: 165 QVND--VIGMAGRGHDAYPVFD------------ISDPMGQSSCVACGECVQACPTG 207 >gi|331268942|ref|YP_004395434.1| RnfABCDGE type electron transport complex subunit C [Clostridium botulinum BKT015925] gi|329125492|gb|AEB75437.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum BKT015925] Length = 440 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ C C+ CP +L P+ L R + Sbjct: 355 EKQAVLPDESSCIRCGRCAEVCPM-------FLIPSTLDSVGRRN----------DYEEF 397 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E L C +CT CP + ++I K +L K Sbjct: 398 EANHGL-DCIECGSCTFVCPAKRHLIQSIRTSKRTVLANK 436 >gi|323702952|ref|ZP_08114609.1| heterodisulfide reductase, C subunit [Desulfotomaculum nigrificans DSM 574] gi|323532083|gb|EGB21965.1| heterodisulfide reductase, C subunit [Desulfotomaculum nigrificans DSM 574] Length = 191 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 PK ++ + C C C++ CP + G Q R + Sbjct: 11 EGGPKALDLNFTKEVKQRSGQEIELCFQCQKCASGCPIAEY------GEIDTNQVLRMIQ 64 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D L ++ C C CP G+ A + ++ M +++ I Sbjct: 65 FGL-------KDELLKSKAIWVCVGCETCGARCPNGIRIAAVMDALREMAIEQGI 112 >gi|253577808|ref|ZP_04855080.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850126|gb|EES78084.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 343 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 37/132 (28%), Gaps = 21/132 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + ++ ++ + + C+ C C+ CP+ + Sbjct: 202 EKLPYSNLSLEGWGQEDYMDRFNSPVWEELYKPCLACGTCTFVCPTCQCYDIKDYDTGHG 261 Query: 197 LQAYR-----------WLIDSRDEF------QGERLDNLE----DPFRLYRCHTIMNCTQ 235 +Q YR + + + + L + ++ C C + Sbjct: 262 VQRYRCWDSCMYSDFTMMAHGNNRNSQMQRFRQRFMHKLVYYPVNNNGMFSCVGCGRCVE 321 Query: 236 SCPKGLNPAKAI 247 CP LN K I Sbjct: 322 KCPSSLNIVKVI 333 >gi|300959104|ref|ZP_07171191.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 175-1] gi|300314283|gb|EFJ64067.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 175-1] Length = 468 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ + D+ + C Sbjct: 270 CIRCSACADACPADLLPQQLFWFSKG---------QQHDKATT---------HNIADCIE 311 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 312 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 342 >gi|152988215|ref|YP_001347022.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PA7] gi|150963373|gb|ABR85398.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PA7] Length = 776 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 25/105 (23%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C+ CP+ + GE L Sbjct: 359 ELPPSPPAMPCIRCGDCAQVCPASLLPQQLHFFALG----------------GEHEQLL- 401 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK-------AIAKIKMMLLDR 257 L+ C C CP + + I + + L Sbjct: 402 -AHHLFDCIECGACAYICPSDIPLVQYYRASKAQIREQRQKLRKA 445 >gi|301647804|ref|ZP_07247591.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 146-1] gi|301074064|gb|EFK88870.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 146-1] Length = 665 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 270 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 311 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 312 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 342 >gi|297521229|ref|ZP_06939615.1| electron transport complex protein RnfC [Escherichia coli OP50] Length = 394 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 197 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 238 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 239 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 269 >gi|268324763|emb|CBH38351.1| conserved hypothetical protein, 4Fe-4S binding domain family [uncultured archaeon] Length = 198 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 12/104 (11%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + + + L C C+ C+ CP + P ++Q + Sbjct: 6 ELDPNFKEEIMNERGGEHLTACFQCSTCTLGCPITEYVPS--YNPRKIIQMSLLGM---- 59 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + L +P L+ C CT CP+ + + + I+ Sbjct: 60 -----RKEVLSNPD-LWVCLICQTCTARCPQDVRISDLLGAIRR 97 >gi|183983483|ref|YP_001851774.1| ferredoxin [Mycobacterium marinum M] gi|183176809|gb|ACC41919.1| ferredoxin [Mycobacterium marinum M] Length = 376 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 38/123 (30%), Gaps = 26/123 (21%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW------------ 202 L+S E Q + C+ C C+ CP+ + S + A RW Sbjct: 254 LRSRESPQWEEVASRCLTCGNCTMVCPTCFCTSTEDVSDLTGEHAERWRHWASCFEFDFT 313 Query: 203 LIDSRDEFQG-----------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + +L D F + C C CP G++ A++ Sbjct: 314 YVHGGGSVRQSGASRYRHWLTHKLATWHDQFGMSGCVGCGRCIAWCPTGIDIT---AEMN 370 Query: 252 MML 254 M Sbjct: 371 KMA 373 >gi|123479045|ref|XP_001322682.1| Iron only hydrogenase large subunit, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121905533|gb|EAY10459.1| Iron only hydrogenase large subunit, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1102 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 57/187 (30%), Gaps = 37/187 (19%) Query: 80 CREGICGSCGMNIDGTNT-LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ--- 135 G CG C + ++G + LAC + + P V K + ++ F Sbjct: 40 PPAGNCGLCVVKVNGNSYELACSTKVTNGMVIETDTPE----VKKRSLDALNAFNDMPLM 95 Query: 136 --HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + IE K + PK ++ + CV C C C +Y+G Sbjct: 96 PGSKEIEDIYKYLIPKRPIRGRKAEKTNALSFDPETCVNCGRCVRVC-----GDMQYIG- 149 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKM 252 E +L D C CT CP L +I+ I Sbjct: 150 ----------------ALDEESHSLNDND----CIQCGMCTTVCPTDCLTYNSSISSIIR 189 Query: 253 MLLDRKI 259 + KI Sbjct: 190 AMAAGKI 196 >gi|220904156|ref|YP_002479468.1| hypothetical protein Ddes_0883 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868455|gb|ACL48790.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 387 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 5/87 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C C C SCP + P R ++ + RLD + Sbjct: 4 LKQCTQCGACLESCPVFLLRKSEEFSPKAKQNLLRSGLN-----RDARLDWRALMELAGQ 58 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +C + L+ +A+A + Sbjct: 59 CAGCGRCKTACARALSVPEALAPARAR 85 >gi|163743706|ref|ZP_02151081.1| formate dehydrogenase, alpha subunit [Phaeobacter gallaeciensis 2.10] gi|161383073|gb|EDQ07467.1| formate dehydrogenase, alpha subunit [Phaeobacter gallaeciensis 2.10] Length = 924 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKD--------------IKGAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G TLA + + + L +D Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPAEGMVVTTNNARAENARKMVMELLVADQPKQDEAR 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S + ++ PK K+ + +D L C+ C C +C Sbjct: 107 DKSSHLWDMAELNGVSESRFPKLEKDRIPLLDDSHVAMKVNLDACISCNLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPVFD------------IADPMGASSCVACGECVQACPTG 207 >gi|70725749|ref|YP_252663.1| hypothetical protein SH0748 [Staphylococcus haemolyticus JCSC1435] gi|123776168|sp|Q4L8G8|FDHL_STAHJ RecName: Full=Putative formate dehydrogenase SH0748 gi|68446473|dbj|BAE04057.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 984 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 53/203 (26%), Gaps = 29/203 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVK------- 102 D L + ++ P++ S C +C + IDG AC Sbjct: 13 DYLVEPGTSLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKIERACSTVVNRPMT 72 Query: 103 ------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELL 155 D+K + L + + + H +++ W + S + + Sbjct: 73 VNTQNNDVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLEEQSYEYKTKPY 132 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +C++C C +C N + W D Sbjct: 133 EKDYGPFYRYDPDQCILCGRCVEACQDIEVNETISIDWNREHPRVIWDNDVPINES---- 188 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 C + C CP Sbjct: 189 ----------SCVSCGQCATVCP 201 >gi|333017993|gb|EGK37298.1| electron transport complex protein rnfC [Shigella flexneri K-304] Length = 601 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 25/91 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP Y D+ + C Sbjct: 270 CIRCSACADACPVDLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 311 Query: 230 IMNCTQSCPKGLNPAK-------AIAKIKMM 253 C CP + + IA I+ Sbjct: 312 CGACAWVCPSNIPLVQYFRQEKAEIAAIRQE 342 >gi|222111967|ref|YP_002554231.1| formate dehydrogenase subunit alpha [Acidovorax ebreus TPSY] gi|221731411|gb|ACM34231.1| formate dehydrogenase, alpha subunit [Acidovorax ebreus TPSY] Length = 961 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A R + + +L+DP Sbjct: 174 MAVHLDACIQCNRCVRACREEQVND-------VIGYALR-------GADSKIVFDLDDPM 219 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L+P I K +DR + Sbjct: 220 GASTCVACGECVQACPTGALSPKTHIGPQK---VDRTV 254 >gi|193211709|ref|YP_001997662.1| DsrK protein [Chlorobaculum parvum NCIB 8327] gi|193085186|gb|ACF10462.1| DsrK protein [Chlorobaculum parvum NCIB 8327] Length = 548 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 18/178 (10%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDL-VVDMSHFYSQHRSIEPWLKTVSPK 149 DG + + +D P V++DL + + + + + Sbjct: 26 KFDGMDWWDIPVEFRDGNWCFPAKPE----VLEDLHFPNPRKWAATDKDWQLPANWEKTI 81 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + R + CV C C+ C + D P + + R + Sbjct: 82 RDGMKDRLKRFRSFKVFMDSCVRCGACADKCHFFLGTGDPKNMPVMRAELVRSIYRQDVN 141 Query: 210 FQGERLDNLEDPFRL-------YR-----CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L +L + C C+ CP G++ A+ I + LL Sbjct: 142 AFARVLTKFSGSRKLTPEVIKEWHMYFNQCTECRRCSVFCPMGIDTAE-ITMMARELL 198 >gi|121595764|ref|YP_987660.1| formate dehydrogenase subunit alpha [Acidovorax sp. JS42] gi|120607844|gb|ABM43584.1| NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein [Acidovorax sp. JS42] Length = 963 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A R + + +L+DP Sbjct: 176 MAVHLDACIQCNRCVRACREEQVND-------VIGYALR-------GADSKIVFDLDDPM 221 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L+P I K +DR + Sbjct: 222 GASTCVACGECVQACPTGALSPKTHIGPQK---VDRTV 256 >gi|52842678|ref|YP_096477.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629789|gb|AAU28530.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 403 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 22/120 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + D C+ C C+ CP+ + +S+ G + DS Sbjct: 281 RWDDVAERCLSCGNCTLVCPTCFCHSEVEKPGLDGCTSEHHREWDSCFTTGHTYLNGKII 340 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ + + L + C C CP G++ + +A I RKI Sbjct: 341 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCVTWCPVGIDITEELAAISGESNARKI 400 >gi|327401972|ref|YP_004342811.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317480|gb|AEA48096.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 320 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 19/108 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD--------RYLGPAILLQAYRWLIDSRD-EFQG 212 L C+ C C CP + + +AY+ + SR E Q Sbjct: 195 FWSSALSRCIRCFACREVCPLCYCKECLVDPTNVVVTPATSAYEKAYKPMWISRAAELQE 254 Query: 213 ERLDNLEDPFRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + +L L RC C ++CP + LL RK+ Sbjct: 255 NIIYHLTRAMHLAGRCADCGECERACPMEIPI---------RLLMRKV 293 >gi|254932171|ref|ZP_05265530.1| formate dehydrogenase [Listeria monocytogenes HPB2262] gi|293583728|gb|EFF95760.1| formate dehydrogenase [Listeria monocytogenes HPB2262] gi|332313016|gb|EGJ26111.1| Putative oxidoreductase yjgC [Listeria monocytogenes str. Scott A] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|149912051|ref|ZP_01900643.1| FixG-related protein [Moritella sp. PE36] gi|149804879|gb|EDM64915.1| FixG-related protein [Moritella sp. PE36] Length = 468 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C+ CP Y L+ Y + R E +G R ++ Sbjct: 205 AFCTYGNAGWMRSIMCTHMCP-YSRFQSAMFDTDTLIVGYDFN---RGEARGPRSRKVDH 260 Query: 221 P-FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 261 KAQGLGDCIDCNLCVQVCPAGIDIRDGLQY 290 >gi|46200214|ref|YP_005881.1| NADH-quinone oxidoreductase chain I [Thermus thermophilus HB27] gi|55980061|ref|YP_143358.1| NADH-quinone oxidoreductase subunit 9 [Thermus thermophilus HB8] gi|2499326|sp|Q56224|NQO9_THET8 RecName: Full=NADH-quinone oxidoreductase subunit 9; AltName: Full=NADH dehydrogenase I subunit 9; AltName: Full=NDH-1 subunit 9 gi|81405222|sp|Q72GD6|NUOI_THET2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|90109660|pdb|2FUG|9 Chain 9, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus gi|90109668|pdb|2FUG|G Chain G, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus gi|90109676|pdb|2FUG|P Chain P, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus gi|90109684|pdb|2FUG|Y Chain Y, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus gi|258588594|pdb|3I9V|9 Chain 9, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 2 MolASU gi|258588602|pdb|3I9V|G Chain G, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 2 MolASU gi|258588610|pdb|3IAM|9 Chain 9, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Reduced, 2 MolASU, With Bound Nadh gi|258588618|pdb|3IAM|G Chain G, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Reduced, 2 MolASU, With Bound Nadh gi|258588626|pdb|3IAS|9 Chain 9, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 4 MolASU, Re-Refined To 3.15 Angstrom Resolution gi|258588634|pdb|3IAS|G Chain G, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 4 MolASU, Re-Refined To 3.15 Angstrom Resolution gi|258588642|pdb|3IAS|P Chain P, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 4 MolASU, Re-Refined To 3.15 Angstrom Resolution gi|258588650|pdb|3IAS|Y Chain Y, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus, Oxidized, 4 MolASU, Re-Refined To 3.15 Angstrom Resolution gi|296863610|pdb|3M9S|9 Chain 9, Crystal Structure Of Respiratory Complex I From Thermus Thermophilus gi|296863623|pdb|3M9S|G Chain G, Crystal Structure Of Respiratory Complex I From Thermus Thermophilus gi|1279869|gb|AAA97946.1| NADH dehydrogenase I, subunit NQO9 [Thermus thermophilus] gi|46197842|gb|AAS82254.1| NADH-quinone oxidoreductase chain I [Thermus thermophilus HB27] gi|55771474|dbj|BAD69915.1| NADH-quinone oxidoreductase chain 9 [Thermus thermophilus HB8] Length = 182 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 14/109 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + H + +GL +C+ C+ C+ +CP+Y Y+ Sbjct: 16 YLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAI----YVE 71 Query: 193 PAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PA D GER + + L RC C ++CP G Sbjct: 72 PA--------ENDPENPVSAGERYAKVYEINML-RCIFCGLCEEACPTG 111 >gi|86743175|ref|YP_483575.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86570037|gb|ABD13846.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 395 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 22/115 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--------LIDS---- 206 E + + C+ C C+ CP+ + S + +A RW L S Sbjct: 271 EHPRWDEVAQRCLSCGNCTMVCPTCFCTSVEDVSDLTGSEAERWRSWESCFSLDHSYLHG 330 Query: 207 ---RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L F + C C CP G++ + + I+ Sbjct: 331 GNVRASGRSRYRQWLTHKFGTWHDQFGTSGCVGCGRCITWCPVGIDVTEELTAIR 385 >gi|320449682|ref|YP_004201778.1| NADH-quinone oxidoreductase subunit I [Thermus scotoductus SA-01] gi|320149851|gb|ADW21229.1| NADH-quinone oxidoreductase, subunit I [Thermus scotoductus SA-01] Length = 182 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 14/109 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + H + +GL +C+ C+ C+ +CP+Y Y+ Sbjct: 16 YLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAI----YVE 71 Query: 193 PAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PA D GER + + L RC C ++CP G Sbjct: 72 PA--------ENDPENPVSAGERYAKVYEINML-RCIFCGLCEEACPTG 111 >gi|157375179|ref|YP_001473779.1| electron transport complex protein RnfC [Shewanella sediminis HAW-EB3] gi|157317553|gb|ABV36651.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella sediminis HAW-EB3] Length = 842 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 41/145 (28%), Gaps = 23/145 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + V + + + L S+E L C+ C C+ Sbjct: 333 GFRGNETDKVIIGGPMMGYALYNDSAPIIKGSNCLLLPDSNELAPAAKELA-CIRCGECA 391 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ L P L + E + F L C CT C Sbjct: 392 QVCPAQ-------LLPQQLFWHAK---------AKEYDKAVN--FNLADCIECGCCTYVC 433 Query: 238 PKGLNPAKA--IAK--IKMMLLDRK 258 P + + IAK +K ++K Sbjct: 434 PSNIPLVEYYRIAKSAVKTEAEEKK 458 >gi|154175353|ref|YP_001407456.1| NADH dehydrogenase subunit G [Campylobacter curvus 525.92] gi|112803263|gb|EAU00607.1| elongation factor Tu (EF-Tu) [Campylobacter curvus 525.92] Length = 779 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 46/189 (24%), Gaps = 20/189 (10%) Query: 72 PTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIKGAIA----VYPLP--------- 117 P L C C C + DG +C K+ I + Sbjct: 30 PALCYLSGCSPTLACRLCMVEADGKRVYSCNAKAKEGMNVITNTAEIDAEREAIMQTYCV 89 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + + Q+ + + + + C++C C Sbjct: 90 NHPLQCGVCDKSGECELQNFAARMRVNSQKFAIKDSHKPHKKWGLINYDPALCIVCERCI 149 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE------DPFRLYRCHTIM 231 T C S P Q + L +S + + + C Sbjct: 150 TVCKDKIGESALKTTPRGADQVAKELKESMPKDAFAVWSKFQKSLIAPSAGDVLECSFCG 209 Query: 232 NCTQSCPKG 240 CT CP G Sbjct: 210 ECTSVCPVG 218 >gi|330836500|ref|YP_004411141.1| electron transport complex, RnfABCDGE type, C subunit [Spirochaeta coccoides DSM 17374] gi|329748403|gb|AEC01759.1| electron transport complex, RnfABCDGE type, C subunit [Spirochaeta coccoides DSM 17374] Length = 438 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 23/94 (24%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C +CP + + L + ++A L Sbjct: 364 RPTTPCISCGRCLDACPVGLSPTTMFKLIASGNIKAALGLN------------------- 404 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIA---KIKMML 254 L C C CP + A + K++ + Sbjct: 405 LMDCRECGACAYVCPAHIPLAAGFSWGKKMRRTV 438 >gi|218781261|ref|YP_002432579.1| hypothetical protein Dalk_3423 [Desulfatibacillum alkenivorans AK-01] gi|218762645|gb|ACL05111.1| protein of unknown function DUF162 [Desulfatibacillum alkenivorans AK-01] Length = 478 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 17/97 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYW-----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +C+ C C CP Y Y GP Q ++ D+ + Sbjct: 304 PTYRQALQCIRCGACLNFCPIYRKVGGYSYGWAYSGPMG--QVLSPMLLGLDKTKDLY-- 359 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C +C CP G+ K + + Sbjct: 360 --------HSCTLCKHCKSVCPGGVEHPKILLTHRAR 388 >gi|221135174|ref|ZP_03561477.1| electron transport complex, RnfABCDGE type, C subunit [Glaciecola sp. HTCC2999] Length = 529 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C+ +CP+ L + Y D+ Q LD C Sbjct: 380 RPCIRCGLCADACPAGLLPQQ--LFWHSKAKEY-------DKAQAYHLDA---------C 421 Query: 228 HTIMNCTQSCPKGLNPAK 245 C CP + Sbjct: 422 IECGACAYVCPSEIPLVH 439 >gi|110678599|ref|YP_681606.1| RdxB protein [Roseobacter denitrificans OCh 114] gi|109454715|gb|ABG30920.1| RdxB protein [Roseobacter denitrificans OCh 114] Length = 478 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + + W + R + + ++ + Sbjct: 204 FVFGGFAREQICIYACPWPRIQGAMMDEDTLTVAYRPWRGEPR-----KHSEEVKAGEPM 258 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 259 GDCIDCMACVNVCPVGIDIRD 279 >gi|210623717|ref|ZP_03294001.1| hypothetical protein CLOHIR_01952 [Clostridium hiranonis DSM 13275] gi|210153405|gb|EEA84411.1| hypothetical protein CLOHIR_01952 [Clostridium hiranonis DSM 13275] Length = 447 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + K + +L E+ + + C+ C C+ CPS +L P Sbjct: 333 MMGFTQWHTEISTNKGSSGILLLTEEESRTPEMQNCIRCGRCTDVCPS-------FLQP- 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L+ AY D + E + ++ C +C+ CP + I K + Sbjct: 385 LLISAYSMKN---DFDKAEEFNAMD-------CIECGSCSFICPARRPLVQTIRTAKREI 434 Query: 255 -LDRK 258 R+ Sbjct: 435 GAKRR 439 >gi|241661962|ref|YP_002980322.1| FAD linked oxidase domain-containing protein [Ralstonia pickettii 12D] gi|240863989|gb|ACS61650.1| FAD linked oxidase domain protein [Ralstonia pickettii 12D] Length = 1345 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 951 >gi|187927432|ref|YP_001897919.1| FAD linked oxidase domain-containing protein [Ralstonia pickettii 12J] gi|309779866|ref|ZP_07674621.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Ralstonia sp. 5_7_47FAA] gi|187724322|gb|ACD25487.1| FAD linked oxidase domain protein [Ralstonia pickettii 12J] gi|308921443|gb|EFP67085.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Ralstonia sp. 5_7_47FAA] Length = 1345 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 951 >gi|114565955|ref|YP_753109.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336890|gb|ABI67738.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 300 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 9/96 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R D L C+ C C +C + + + +W+ + Sbjct: 179 RFFEDILSRCIRCYACRQACVACNCRTCIFDETKP-----QWVGRETSISDNMMYHLVRA 233 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C + CP + I L+ Sbjct: 234 SHMAGRCIECGECERVCPVNIPLM----LINQKLIK 265 >gi|256846561|ref|ZP_05552018.1| NADH dehydrogenase [Fusobacterium sp. 3_1_36A2] gi|294784148|ref|ZP_06749449.1| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium sp. 3_1_27] gi|256718330|gb|EEU31886.1| NADH dehydrogenase [Fusobacterium sp. 3_1_36A2] gi|294488218|gb|EFG35563.1| electron transport complex, RnfABCDGE type, C subunit [Fusobacterium sp. 3_1_27] Length = 435 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 42/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H + ++ + + + K LL + + C+ C Sbjct: 308 YILDHCGINREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKSCISC 367 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D R E + L C +C Sbjct: 368 SKCVSACPMGLAP---------------LMFD-RLAAAKEYEEMAV--HNLMDCIECGSC 409 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A++I K L +K Sbjct: 410 AYICPANRPLAESIKTGKAKLRAKK 434 >gi|237741389|ref|ZP_04571870.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 4_1_13] gi|229430921|gb|EEO41133.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 4_1_13] Length = 435 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 42/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H + ++ + + + K LL + + C+ C Sbjct: 308 YILDHCGINREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKSCISC 367 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D R E + L C +C Sbjct: 368 SKCVSACPMGLAP---------------LMFD-RLAAAKEYEEMAV--HNLMDCIECGSC 409 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A++I K L +K Sbjct: 410 AYICPANRPLAESIKTGKAKLRAKK 434 >gi|255533955|ref|YP_003094327.1| NADH-quinone oxidoreductase subunit I [Pedobacter heparinus DSM 2366] gi|255346939|gb|ACU06265.1| NADH-quinone oxidoreductase, chain I [Pedobacter heparinus DSM 2366] Length = 165 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K + + +SHF+ + +I V + + H ++ +G C C C+ SC Sbjct: 27 IAKGMAITISHFFKKEATIRY--PEVEREFSTNFRGMHSLKRDEEGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ AI + A + ++ ++ E+ ++ + L RC C ++CPK Sbjct: 85 PAE----------AITMIAAERKPEEKELYREEKYASVYEINML-RCIFCGLCEEACPKE 133 >gi|258404661|ref|YP_003197403.1| electron transport complex, RnfABCDGE type, C subunit [Desulfohalobium retbaense DSM 5692] gi|257796888|gb|ACV67825.1| electron transport complex, RnfABCDGE type, C subunit [Desulfohalobium retbaense DSM 5692] Length = 427 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C CP +L A QA + +L + + C Sbjct: 352 EDCFKCGACVRVCPMNLMP---FL-IAGFSQADSF--------------DLAENNSILSC 393 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP + + I K + + Sbjct: 394 VECGCCAYVCPAQIPMVQWIQLGKSEIRAER 424 >gi|71065334|ref|YP_264061.1| hypothetical protein Psyc_0774 [Psychrobacter arcticus 273-4] gi|71038319|gb|AAZ18627.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 469 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 31/118 (26%), Gaps = 7/118 (5%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 Y+ + I + + C CP Y Sbjct: 175 GTDALYNSWQMIG--FIPFPDWATWIWVSIFIFAFSTYVNAGYMREQMCIQICP-YGRFQ 231 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ +Y + R E +G R +P L C C Q CP G++ Sbjct: 232 SVMFDKDTLVVSYDYE---RGEPRGARKKG-TNPENLGDCIECQMCVQVCPTGIDIRD 285 >gi|301062307|ref|ZP_07202973.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300443607|gb|EFK07706.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 186 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 10/126 (7%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V L + + + + + + Q+ D C+ C C Sbjct: 26 PVKHALTTVVRDRFEAVAQKQEIVDPTPVQTLLAMGQAERKAFWHDHFRRCIKCYGCVDI 85 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYR-CHTIMNCTQSC 237 CP + G L+ +W+ R E L +L F+++ C +C Q+C Sbjct: 86 CPV------QMPGTHGSLEIEKWV--PRGEVPPVHPLFHLIRAFQIWDTCVLCGDCEQTC 137 Query: 238 PKGLNP 243 P G+ Sbjct: 138 PAGIPL 143 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 12/82 (14%) Query: 168 YECVMCACCSTSC----PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ------GERLDN 217 +C+ C C +C P + + + ++D ER Sbjct: 9 SKCIQCGDCVNACMAENPVKHALTTVVRDRFEAVAQKQEIVDPTPVQTLLAMGQAERKAF 68 Query: 218 LEDPFRLYRCHTIMNCTQSCPK 239 D FR RC C CP Sbjct: 69 WHDHFR--RCIKCYGCVDICPV 88 >gi|217963307|ref|YP_002348985.1| formate dehydrogenase Alpha subunit [Listeria monocytogenes HCC23] gi|217332577|gb|ACK38371.1| formate dehydrogenase Alpha subunit [Listeria monocytogenes HCC23] gi|307572114|emb|CAR85293.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes L99] Length = 995 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQDRPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|163740366|ref|ZP_02147760.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Phaeobacter gallaeciensis 2.10] gi|161386224|gb|EDQ10599.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Phaeobacter gallaeciensis 2.10] Length = 510 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 22/81 (27%), Gaps = 8/81 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-- 224 C +CP + + + W + R + + D L Sbjct: 237 FGGFAREQICIYACPWPRIQAAMMDEDTLTVGYREWRGEPRGKPRKT------DEPGLVH 290 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 291 GDCIDCMACVNVCPMGIDIRD 311 >gi|157145890|ref|YP_001453209.1| electron transport complex protein RnfC [Citrobacter koseri ATCC BAA-895] gi|166225089|sp|A8AH10|RNFC_CITK8 RecName: Full=Electron transport complex protein rnfC gi|157083095|gb|ABV12773.1| hypothetical protein CKO_01641 [Citrobacter koseri ATCC BAA-895] Length = 705 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATA---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK----------AIAKIKMMLLDRK 258 C CP + + AIA+ + + K Sbjct: 419 CGACAWVCPSSIPLVQYFRQEKAEIYAIAQEEKRAAEAK 457 >gi|76666806|emb|CAJ31184.1| reductase, iron-sulfur binding subunit [uncultured sulfate-reducing bacterium] Length = 538 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 14/100 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLG-PAILLQAYRWLIDSRDEFQGERLDNLEDPFR-- 223 + C C C+ +CP Y + P + R L + G+ L L Sbjct: 106 IEYCAKCQTCANACPIYTETGGEDIYRPTYRGEILRRLYKNYVRKGGKILAKLTGDEIEA 165 Query: 224 -----------LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 YRC C Q+CP G++ +++ Sbjct: 166 SWTMVARVMELCYRCTICRRCAQTCPIGVDNGLVTRELRK 205 >gi|328948183|ref|YP_004365520.1| heterodisulfide reductase subunit C-like protein [Treponema succinifaciens DSM 2489] gi|328448507|gb|AEB14223.1| heterodisulfide reductase subunit C-like protein [Treponema succinifaciens DSM 2489] Length = 131 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C++C CS +CP+Y +S Y + I+ + + +Y C Sbjct: 23 KCMVCGKCSGTCPNY--DSMEYHPHQFVQMVENGEIEPLLKSK-----------SIYTCL 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C + CP+ + PAK I ++ ++ + Sbjct: 70 SCFACLERCPRQVEPAKLIDAVRTVVERER 99 >gi|262037146|ref|ZP_06010638.1| electron transport complex protein RnfC [Leptotrichia goodfellowii F0264] gi|261748834|gb|EEY36181.1| electron transport complex protein RnfC [Leptotrichia goodfellowii F0264] Length = 441 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 18/90 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP P + YR + + ++L L L C Sbjct: 364 NCISCGYCVDACPMGLM-------PMKFEEMYR-------KGKYKKLVKLN----LDMCI 405 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C SCP + K+I + K ML + + Sbjct: 406 ECGACEYSCPSRVPLIKSIKEGKGMLREMR 435 >gi|240167856|ref|ZP_04746515.1| FAD linked oxidase-like protein [Mycobacterium kansasii ATCC 12478] Length = 1051 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 32/120 (26%), Gaps = 13/120 (10%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY-ECVMCACCS------TSCPSY 183 F + + +P ED CV C T CPSY Sbjct: 563 RFDENLKLGTDY----NPWRPAVKFAYPEDHGDFSHAALRCVGVGKCRVPEAQTTMCPSY 618 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + + ++ R E + + E L C CT CP ++ Sbjct: 619 QVTREEKHSTRGRARLLFEML--RGEVITDGWQSAEVADALDLCLACKGCTSDCPVDVDI 676 >gi|71909730|ref|YP_287317.1| hypothetical protein Daro_4121 [Dechloromonas aromatica RCB] gi|71849351|gb|AAZ48847.1| Protein of unknown function DUF224, cysteine-rich region:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Dechloromonas aromatica RCB] Length = 1291 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 9/99 (9%) Query: 166 GLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + C+ C C C ++ + ++ LG ++L++A+ + +R + D Sbjct: 820 MIKNCLRCGKCKPVCSTHVPRANLLYSPRNKILGTSLLVEAFLYEEQTRRGISLKHFDEF 879 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D C C + CP ++ ++ L + Sbjct: 880 NDV--ADHCTVCHRCLKPCPVDIDFGDVSVAMRNFLRKQ 916 >gi|257875824|ref|ZP_05655477.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC20] gi|257809990|gb|EEV38810.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC20] Length = 445 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E+ + C+ C C +CP P + Q YR + D + E L Sbjct: 355 FNEETDWLYAENPCIRCNKCVEACPMLLM-------PMEIDQFYR----AGDYQKCEELL 403 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CT CP + A I K + Sbjct: 404 A-------EACINCGACTFVCPAKRSLAANITAAKGKVAQ 436 >gi|239918455|ref|YP_002958013.1| (4Fe-4S) cluster-containing protein [Micrococcus luteus NCTC 2665] gi|281415343|ref|ZP_06247085.1| (4Fe-4S) cluster-containing protein [Micrococcus luteus NCTC 2665] gi|239839662|gb|ACS31459.1| (4Fe-4S) cluster-containing protein [Micrococcus luteus NCTC 2665] Length = 528 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 40/168 (23%), Gaps = 14/168 (8%) Query: 93 DGTNTLA-CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 +G L + + V + V L+ S + W Sbjct: 243 NGRMCLTLPETLITVMGIEKIVPTFQDLEVFLQLLPRSSTGERMNPYTSMWTGVTPGDGP 302 Query: 152 KELLQSHEDRQKIDGLY--------ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 +E D + L C+ C+ C CP Y G L Sbjct: 303 QEFHLVLLDNGRSAVLSDPEGRSALHCIRCSACMNVCPVYEQTGGHAYGSVYPGPIGAIL 362 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Q +L L C CP ++ + ++ Sbjct: 363 SPQLTGVQEGANGSLPYASSL-----CGACYDVCPVAIDIPSILVHLR 405 >gi|313206207|ref|YP_004045384.1| NADH dehydrogenase subunit i [Riemerella anatipestifer DSM 15868] gi|312445523|gb|ADQ81878.1| NADH dehydrogenase subunit I [Riemerella anatipestifer DSM 15868] gi|325336346|gb|ADZ12620.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Riemerella anatipestifer RA-GD] Length = 175 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 13/119 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++K + + + HF+ + +I+ AK H ++ +G C C C+ +C Sbjct: 26 IVKGMSITLKHFFKKDSTIQY--PEQEKPRAKVWRGRHVLKRDDEGRERCTACGLCAVAC 83 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 P+ YR E+ + + L RC C ++CPK Sbjct: 84 PAEAITMTSAERTKEEKHLYR----------EEKYASTYEINML-RCIFCGLCEEACPK 131 >gi|310778339|ref|YP_003966672.1| electron transport complex, RnfABCDGE type, C subunit [Ilyobacter polytropus DSM 2926] gi|309747662|gb|ADO82324.1| electron transport complex, RnfABCDGE type, C subunit [Ilyobacter polytropus DSM 2926] Length = 438 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 17/93 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D C+ C C CP P ++ R SR E + Sbjct: 349 LALLKDECNEYETKACINCGACVDVCPMGLM-------PLRYVELARKGDYSRMEKR--- 398 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + L C C +CP K+I Sbjct: 399 -------YSLSSCIKCGCCEYACPTKRPIIKSI 424 Score = 40.1 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 3/47 (6%) Query: 209 EFQGERLDNLEDPFRLY---RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + G L L+D Y C C CP GL P + + + Sbjct: 343 KGTGGILALLKDECNEYETKACINCGACVDVCPMGLMPLRYVELARK 389 >gi|295091667|emb|CBK77774.1| Predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Clostridium cf. saccharolyticum K10] Length = 479 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 67/241 (27%), Gaps = 21/241 (8%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 +K + + + P + + LD I N S + + Sbjct: 100 VKLFPMRNFYPAGDEQIMVCDVTGRTVPPSGIPLDVGCVIANTATMYAVFEASQGKPLTR 159 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 N V+ + + + + V+ + S+E Sbjct: 160 KYLTVTGAVNEPCIVRAPLGSSFSDCLRLAGGTGLSRYYVLAGGPMMGKLYSMEEAESLT 219 Query: 147 SPKPAKELLQSHEDRQKIDGLY------------ECVMCACCSTSCPSYWWNSDRYLGPA 194 K L+ ED I C+ C+ C+ CP Y L P Sbjct: 220 VTKTTSGLIVLPEDTPLIRRKTAPVSLSLKLAKTSCIQCSYCTQMCPRYLT--GHPLRPH 277 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMM 253 ++++ + + ++ + C C +CP G+ P + +K + Sbjct: 278 LIMRKLAFCENPKELVGDRDVQQAMI------CSECGLCENYACPMGIYPRQVNIYMKDL 331 Query: 254 L 254 L Sbjct: 332 L 332 >gi|260892888|ref|YP_003238985.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] gi|260865029|gb|ACX52135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] Length = 656 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYL 191 +QH I + T + + ++ L +C C C CP D + Sbjct: 207 AQHPKIRLYPATTLEEVEGFVGNWKVKVKQRPLLVDEKCDRCGRCEEVCPV--EVPDSFN 264 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 L +A + + R L C C + CP+GL Sbjct: 265 YGLSLRKAIYF---PHPDAFPSRYAV-----DLDHCTKCGECVKVCPRGL 306 >gi|291288016|ref|YP_003504832.1| aldo/keto reductase [Denitrovibrio acetiphilus DSM 12809] gi|290885176|gb|ADD68876.1| aldo/keto reductase [Denitrovibrio acetiphilus DSM 12809] Length = 374 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 11/139 (7%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +SV+ + +MS ++ + + + + + ++ + + C C C Sbjct: 238 GVSVVLSGMTEMSQLEDNMKTSDSFRQLNADE--MRAIEQAGEIIRATTAISCTACQYCV 295 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR---CHTIMNCT 234 CP + + QA ++ + Q NL + C C Sbjct: 296 DDCPKNIPIPSYF---GMFNQAKKYNNN---LIQSIYYKNLAGAEGVGSASECIECGLCE 349 Query: 235 QSCPKGLNPAKAIAKIKMM 253 CP+ L + + ++ + Sbjct: 350 DHCPQHLPIIEHLKELHKL 368 >gi|297537691|ref|YP_003673460.1| FAD linked oxidase domain-containing protein [Methylotenera sp. 301] gi|297257038|gb|ADI28883.1| FAD linked oxidase domain protein [Methylotenera sp. 301] Length = 1292 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 167 LYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + +C+ C C C ++ + ++ LG ++L++A+ + +R + D Sbjct: 821 ISDCLRCGKCKPVCTTHVPRANLLYSPRNKILGTSLLIEAFLYEEQTRRGISLKHFDEFN 880 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C CP ++ ++ L ++ Sbjct: 881 DV--ADHCTVCHKCLNPCPVDIDFGDVSVAMRNFLREQG 917 >gi|163794187|ref|ZP_02188159.1| formate dehydrogenase alpha subunit [alpha proteobacterium BAL199] gi|159180355|gb|EDP64876.1| formate dehydrogenase alpha subunit [alpha proteobacterium BAL199] Length = 929 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 33/212 (15%) Query: 48 YYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREG---ICGSCGMNIDGTNTLACV 101 + +D + + + + + +++ P L + + C +C + I+G LA Sbjct: 12 FELDGQSVEALPGETIWQVADRLGTEIPHLCWKPAPGYRGDGNCRACMVEIEGERVLAAS 71 Query: 102 K-DMKDIKGAIAVYPLPHMSVIK---DLVVDMSHFYSQHRS-----IEPWLKTVSPKPAK 152 + S K +L+V +Q + Sbjct: 72 CIRTPSEGMKVQSASERAKSSRKLVMELLVADQPARAQAHQPDSTLWKFANSQGVEASRF 131 Query: 153 ELLQSHEDRQKID----GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 Q+ D L C+ C C +C N +G A + + D Sbjct: 132 PAHQAPCDDNSHPGIAVNLDACIQCNLCVRACREVQVND--VIGLAYRGHQAKIVFD--- 186 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +D C C Q+CP G Sbjct: 187 ---------FDDAMGASTCVGCGECVQACPTG 209 >gi|56476887|ref|YP_158476.1| electron transport complex protein rnfC (nitrogen fixation protein rnfC) [Aromatoleum aromaticum EbN1] gi|56312930|emb|CAI07575.1| Electron transport complex protein rnfC (Nitrogen fixation protein rnfC) [Aromatoleum aromaticum EbN1] Length = 508 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 24/89 (26%), Gaps = 18/89 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C +CP G L A R D F L C Sbjct: 377 PCIRCSTCVRACPV---------GLLPLEIARRIGAGDLDAAVK---------FGLKDCI 418 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CP + + K L R Sbjct: 419 ACGCCAYDCPSHIPLVQYFHHAKGELAAR 447 >gi|16081223|ref|NP_393525.1| anaerobic sulfite reduction protein A related protein [Thermoplasma acidophilum DSM 1728] gi|10639192|emb|CAC11194.1| anaerobic sulfite reduction protein A related protein [Thermoplasma acidophilum] Length = 306 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 67/267 (25%), Gaps = 28/267 (10%) Query: 10 SRVKRGKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKN 68 S++ + + K++ I R + + P + V + +C + Sbjct: 36 SKISSFSQVSEKKSSYSPKDFLIKR-SENVLEVPRAEKKAVFGVKSCDLRGFQLMDLQIL 94 Query: 69 KIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKD---- 124 DP T+RR + C G + + D ++ V D Sbjct: 95 NKDPFYTVRRENTIFVNFVCNEMCPGGFCTSFGGPVLDKFDIQVIHMDGRYFVQADEKYA 154 Query: 125 -----LVVDMSHF-YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 V +S+H E + + C+ C C+ Sbjct: 155 KFLEGFKVSEDQNVFSKHSEAFLQHYGRLELNNIEKRMKWSSKLWNEFANYCISCGACNY 214 Query: 179 SCPS-------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED---PF 222 SCP+ L A D D + + Sbjct: 215 SCPTCYCIDVYDDETGRKKEWDSCILEGFTRTAAGNVRPDLSDRLRQRFYHKFKYYRLSK 274 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 Y C C CP ++ + I Sbjct: 275 GEYLCTGCNRCVDDCPVDIDIKEVITH 301 >gi|116747531|ref|YP_844218.1| iron-sulfur cluster binding protein [Syntrophobacter fumaroxidans MPOB] gi|116696595|gb|ABK15783.1| iron-sulfur cluster binding protein [Syntrophobacter fumaroxidans MPOB] Length = 475 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ CA C CP Y Y GP + + +R + L Sbjct: 312 CIRCAACLNVCPVYGKIGGHAYGHVYCGPVGSVLTPLLVGVNR--AKDLCLGE------- 362 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C +CP ++ + +++ L D Sbjct: 363 ---TLCGACRDACPLHIDIPGMLLRLRSKLAD 391 >gi|307721744|ref|YP_003892884.1| NADH dehydrogenase subunit G [Sulfurimonas autotrophica DSM 16294] gi|306979837|gb|ADN09872.1| NADH dehydrogenase subunit G [Sulfurimonas autotrophica DSM 16294] Length = 828 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 54/215 (25%), Gaps = 29/215 (13%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKD-- 106 ++ L + P + R S C C + DG AC KD Sbjct: 12 EVQTQEGEYLLNAARANDIFIPAICYLTRCSPTLA-CRICLVEADGKQVYACNAKAKDGM 70 Query: 107 --IKGAIAVYPLP---------HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + + + + Q+ ++ + Sbjct: 71 SITTSTETIEKERRAIMEVYDVNHPLQCGVCDQSGECELQNYTLHIGVDAQHYTVKDVDR 130 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 SH+ C++C C T+C ++ P A + + + + Sbjct: 131 SSHDWGHLHYDPGLCIVCERCVTTCKDMIGDNSLKTIPRG---ADALNAEYKGQMPKDAY 187 Query: 216 DN----------LEDPFRLYRCHTIMNCTQSCPKG 240 L + + C + C CP G Sbjct: 188 AMWNKLNKSLIGLTNGTDVLDCTSCGECAAVCPVG 222 >gi|299139947|ref|ZP_07033118.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] gi|298598094|gb|EFI54261.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] Length = 980 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 7/79 (8%) Query: 169 ECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C + CPS+ + L+ E N + Sbjct: 571 RCVGVGACRKTDAGSMCPSFMATGEEMHSTRGRAHLLWELMQG--EVLEGGWKNKQVKES 628 Query: 224 LYRCHTIMNCTQSCPKGLN 242 L C + C CP ++ Sbjct: 629 LDLCLSCKACKSECPVSVD 647 >gi|52785968|ref|YP_091797.1| YjgC [Bacillus licheniformis ATCC 14580] gi|52348470|gb|AAU41104.1| YjgC [Bacillus licheniformis ATCC 14580] Length = 1010 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 58/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 37 VEMEASEEQTVLQLLNNSSIEVPQICYHPSLGPIETCDTCIVSINGELKRSCSAEVKDGD 96 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + P L + + + + H +++ P K Sbjct: 97 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKVNHQSIPFDQKP 156 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + W D Sbjct: 157 YHKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 214 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 215 ------------SCVSCGHCSTVCP 227 >gi|256372754|ref|YP_003110578.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256009338|gb|ACU54905.1| protein of unknown function DUF224 cysteine-rich region domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 412 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 19/78 (24%), Gaps = 9/78 (11%) Query: 163 KIDGLYECVMCA--CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + Y C C CP Y D P + EF+ D + Sbjct: 23 WRNAAYNCYSSGHKFCREVCPVYQVTRDETYLPTAFHANIVAMEQGLVEFEDVARDYVN- 81 Query: 221 PFRLYRCHTIMNCTQSCP 238 C C CP Sbjct: 82 ------CTMCGACELRCP 93 >gi|227874810|ref|ZP_03992963.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris ATCC 35243] gi|269976771|ref|ZP_06183746.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris 28-1] gi|306818102|ref|ZP_07451833.1| glycerol-3-phosphate dehydrogenase [Mobiluncus mulieris ATCC 35239] gi|307700662|ref|ZP_07637690.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris FB024-16] gi|227844585|gb|EEJ54741.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris ATCC 35243] gi|269934968|gb|EEZ91527.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris 28-1] gi|304649066|gb|EFM46360.1| glycerol-3-phosphate dehydrogenase [Mobiluncus mulieris ATCC 35239] gi|307614192|gb|EFN93433.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Mobiluncus mulieris FB024-16] Length = 425 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 12/88 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +CV C C T CP +++ GP + L Sbjct: 29 LDQCVKCTICETQCPVLRVT-EKFPGPKYVGPQA-----------ERYRGGYSVDHSLDY 76 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C+ SCP+G+ A+ A+ + ++ Sbjct: 77 CSGCSICSTSCPQGVKIAEINAQARAVM 104 >gi|123475006|ref|XP_001320683.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121903493|gb|EAY08460.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 496 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 61/215 (28%), Gaps = 29/215 (13%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 +D + +L + +K + + + G C C + ++G +C Sbjct: 13 RFAKVIIDGKQIDFKSQETILELLSKNNINIPHKCQGT-GDCRLCKVLVNGVPRQSCEVI 71 Query: 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 KD P ++ ++ + + S +E + K+ Sbjct: 72 AKDGMIISTKDP----NIKNNIENKVKIYASFDPDVEKAYHLIKNPSMKQHHIDITTGSI 127 Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C CP++ +L Y L +S Sbjct: 128 QLNHETCIDCFKCVDVCPAHVLTKGDHLQTFG----YFGLKES----------------- 166 Query: 224 LYRCHTIMNCTQSCP-KGLNPAKAIAKIKMMLLDR 257 C + NC + CP K + + + + Sbjct: 167 --GCLSCGNCLEVCPTKSFSITDNSGLFRSAMSKK 199 >gi|332703002|ref|ZP_08423090.1| Formate dehydrogenase [Desulfovibrio africanus str. Walvis Bay] gi|332553151|gb|EGJ50195.1| Formate dehydrogenase [Desulfovibrio africanus str. Walvis Bay] Length = 386 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 18/93 (19%) Query: 166 GLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L CV C C +CP + ++LG A R D+ + Sbjct: 258 YLAGCVNCYNCRVACPVCYCKECVFVTDVFDHKPWQFLGWAKQKGVLRMPTDTL-FYHLT 316 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ ++ C C+ +CP + + Sbjct: 317 RMAHMST-----ACVGCGQCSNACPNDIPVMEI 344 >gi|226324700|ref|ZP_03800218.1| hypothetical protein COPCOM_02486 [Coprococcus comes ATCC 27758] gi|225207148|gb|EEG89502.1| hypothetical protein COPCOM_02486 [Coprococcus comes ATCC 27758] Length = 441 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 T K + +L +D C+ C C +CPS S Sbjct: 331 MMGFAMYTTDTPITKTSSSILCMSKDEVSACEPTACINCGRCVDACPSRIIPSRLADF-- 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DE + + LE C +C+ CP +AI ++ Sbjct: 389 ---------AERHDEEAFLKFNGLE-------CVECGSCSYVCPAKRQLKQAIGSMRKTA 432 Query: 255 LDRK 258 L K Sbjct: 433 LANK 436 >gi|147919465|ref|YP_686795.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] gi|110622191|emb|CAJ37469.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] Length = 369 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 16/115 (13%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYL 191 + + E +K + K ++ + +CV C C+ +CP + Sbjct: 255 RAKINESMIKLAAKHQKKHFSEAADPAFWASHFSKCVKCQGCTVNCPVIFDLKLKPMAFE 314 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 G + + + + RL L + C C CP + ++ Sbjct: 315 GMGDIPPSMGYHM--------ARLAALGN-----NCINCGMCEDGCPVEIPLSRL 356 >gi|11498113|ref|NP_069338.1| heterodisulfide reductase, subunit D, putative [Archaeoglobus fulgidus DSM 4304] gi|32699491|sp|O29748|HMED_ARCFU RecName: Full=Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2; Short=Hme subunit D gi|2650123|gb|AAB90735.1| heterodisulfide reductase, subunit D, putative [Archaeoglobus fulgidus DSM 4304] Length = 555 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 27/153 (17%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 +P V +D + + E W + ++R + CV C Sbjct: 48 MPFGDVERD--------FHDLKLPENWKEIFLEAMKD---TLEKNRSFKLFMDICVRCGA 96 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLID--------------SRDEFQGERLDNLEDP 221 C+ C Y D P + R + E + L L Sbjct: 97 CADKCHYYIGTGDPKNMPVARAELIRSVYRRYFTPAGKFFGEWAGARELNEDVLKELY-- 154 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + Y+C C+ CP G++ A+ + ++ ML Sbjct: 155 YYAYQCSLCRRCSLFCPYGIDTAEIVWWLRRML 187 >gi|325292931|ref|YP_004278795.1| Nitrogen fixation protein fixG [Agrobacterium sp. H13-3] gi|325060784|gb|ADY64475.1| Nitrogen fixation protein fixG [Agrobacterium sp. H13-3] Length = 527 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 37/161 (22%), Gaps = 10/161 (6%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + +K AI + VI L FY Sbjct: 152 DRNARMKLDAAPFTFGKLRKRVMKHAIWL-------VIGVLTGGAWIFYFADAPTLAREF 204 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P + C+ CP + ++++ W Sbjct: 205 MTGQAPMIAYTTVAILTATTYVFGGLMREQVCTYMCPWPRIQAAMLDENSLVVTYNDWRG 264 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + R + C C CP G++ Sbjct: 265 EPR---TRHAKKAAATGESVGDCVDCNACVAVCPMGIDIRD 302 >gi|323702958|ref|ZP_08114615.1| Formate dehydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323532089|gb|EGB21971.1| Formate dehydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 372 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 8/85 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF-----QGERLDNL--E 219 L C+ C C +CP + GP +++ ++ + L +L Sbjct: 245 LATCIKCQNCRQACPICFCRECVSAGPIFDHNGEKYMQYAKRKGAIELPTDTVLFHLTRV 304 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPA 244 + L C C +CP + Sbjct: 305 NHMGL-SCVGCGQCENACPMDIPVG 328 >gi|322378677|ref|ZP_08053110.1| NADH dehydrogenase subunit G [Helicobacter suis HS1] gi|321148894|gb|EFX43361.1| NADH dehydrogenase subunit G [Helicobacter suis HS1] Length = 799 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 66/230 (28%), Gaps = 53/230 (23%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKD 103 +D + V+ G +L+ P + C + C C + ++G +C Sbjct: 16 IDGFKVEYK-EGQTILEAA-RSAGVYIPAICYLSGCSPTVACKMCMVEVEGKRVYSCNTK 73 Query: 104 MKDIKGAIAVYP---------LPHMSVIKDLVVDM----------SHFYSQHRSIEPWLK 144 K + P + V L + +P+ Sbjct: 74 PKPNTNILTNTPALKTERQMIMQTYDVNHPLECGVCDKSGECELQDMTMRMQVDTQPFAV 133 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 KP Q+ D C+MC C T+C D L +A + + Sbjct: 134 RDDAKPFAFWAQASYDPN------LCIMCERCVTTCSDN--IGDNNL------KATKVNL 179 Query: 205 DSRDEFQGERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 + D+F+ +DPF ++ C C CP G Sbjct: 180 HAPDKFKE---SMPKDPFSVWSRKQKGMISFVGEVPCFDCGECIAVCPVG 226 >gi|220932271|ref|YP_002509179.1| electron transport complex, RnfABCDGE type, C subunit [Halothermothrix orenii H 168] gi|219993581|gb|ACL70184.1| electron transport complex, RnfABCDGE type, C subunit [Halothermothrix orenii H 168] Length = 441 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 +P S K LL + + C+ CA C SCP Sbjct: 332 MMGISQPHTGIPSNKGTSGLLILPPEEIEDFNPRPCIKCARCVDSCPMMLM--------- 382 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +Q + + E D LE + + C C+ CP + I K + Sbjct: 383 -PIQLSNF-------AKHEMYDELE-KYNVLNCIECGTCSYVCPARRPLVEYIRLGKAEI 433 Query: 255 LDRK 258 + R+ Sbjct: 434 IARR 437 >gi|255532311|ref|YP_003092683.1| D-lactate dehydrogenase (cytochrome) [Pedobacter heparinus DSM 2366] gi|255345295|gb|ACU04621.1| D-lactate dehydrogenase (cytochrome) [Pedobacter heparinus DSM 2366] Length = 977 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 15/119 (12%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGPAILLQ 198 + + +E + + + +C C T CPSY D Sbjct: 537 GQKGFDFKTVFRYEGQNMLQHIEQCNGSGDCRKSHLAGGTMCPSYMATHDEKDTTRARAN 596 Query: 199 AYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 R +L S + + + L C + C CP ++ +AK+K L Sbjct: 597 ILRNFLTHSEQVNKFDHREI---KEILDLCLSCKGCKSECPSNVD----MAKLKAEFLQ 648 >gi|315023108|gb|EFT36121.1| NADH-ubiquinone oxidoreductase chain I [Riemerella anatipestifer RA-YM] Length = 161 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 13/119 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++K + + + HF+ + +I+ AK H ++ +G C C C+ +C Sbjct: 12 IVKGMSITLKHFFKKDSTIQY--PEQEKPRAKVWRGRHVLKRDDEGRERCTACGLCAVAC 69 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 P+ YR E+ + + L RC C ++CPK Sbjct: 70 PAEAITMTSAERTKEEKHLYR----------EEKYASTYEINML-RCIFCGLCEEACPK 117 >gi|91793220|ref|YP_562871.1| electron transport complex protein RnfC [Shewanella denitrificans OS217] gi|91715222|gb|ABE55148.1| electron transport complex, RnfABCDGE type, C subunit [Shewanella denitrificans OS217] Length = 731 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 18/76 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ L P L + E D F L C Sbjct: 383 CIRCGECAVACPAL-------LLPQQLFWH----------AKAEEYDKAA-SFNLKDCIE 424 Query: 230 IMNCTQSCPKGLNPAK 245 C+ CP + + Sbjct: 425 CGCCSYVCPSDIPLVE 440 >gi|319794266|ref|YP_004155906.1| formate dehydrogenase, alpha subunit [Variovorax paradoxus EPS] gi|315596729|gb|ADU37795.1| formate dehydrogenase, alpha subunit [Variovorax paradoxus EPS] Length = 957 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 71/246 (28%), Gaps = 48/246 (19%) Query: 43 PCMDTYYVD----LDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNT 97 P + + +D G +L +I P L R +G C SC + IDG T Sbjct: 11 PAVVEFELDGRPVQGYEGETILQVADRHGVEI-PRLCYTPGYRADGNCRSCMVEIDGERT 69 Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA-----K 152 LA + + V ++ +V + W+ Sbjct: 70 LAPSCC-RAPVAGMKVQAKSERALKSQKMVLEMLLSDMPQKGHKWIGNDETLQHGELSEW 128 Query: 153 ELLQSHEDRQ------------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 E R L C+ C C +C N Sbjct: 129 ASRMDVEVRPALAAISRTQPAPDLSHPAMAVNLDACIQCNRCVRACREEQVND------- 181 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMM 253 ++ A+R D + +L+D C C Q+CP G L P I Sbjct: 182 VIGYAFR----GHDSAI---VFDLQDGMGDSTCVACGECVQACPTGALMPKSHIGA---Q 231 Query: 254 LLDRKI 259 +DRK+ Sbjct: 232 EVDRKV 237 >gi|166032839|ref|ZP_02235668.1| hypothetical protein DORFOR_02555 [Dorea formicigenerans ATCC 27755] gi|166027196|gb|EDR45953.1| hypothetical protein DORFOR_02555 [Dorea formicigenerans ATCC 27755] Length = 321 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 24/98 (24%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + + EC+ C C C +L + D E+L L Sbjct: 1 MKSKNDVSECIHCHVCQKHC--------EFLKKYGI-----------DIGDTEKLKELS- 40 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C CT+ CP G++ I K++ + Sbjct: 41 ----YHCFLCGKCTEVCPIGIDGRDYILKLRRENVREA 74 >gi|163783700|ref|ZP_02178687.1| oxido/reductase iron sulfur protein [Hydrogenivirga sp. 128-5-R1-1] gi|159881025|gb|EDP74542.1| oxido/reductase iron sulfur protein [Hydrogenivirga sp. 128-5-R1-1] Length = 399 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 9/91 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C + CPSY + L ++ E + C Sbjct: 18 KCVKCGLCKSVCPSYH--GEEGSYARGRLALAEMVVKGELPLNEEVAAQWNE------CA 69 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP ++ + + + L ++K+ Sbjct: 70 MCRRCEWVCPNDVHYKDVLVEAR-ELQEKKL 99 >gi|303328331|ref|ZP_07358769.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] gi|302861661|gb|EFL84597.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] Length = 430 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 6/92 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C CP + + + L + + L Sbjct: 15 DDKLVSCMKCGFCQAFCPVFDETGEEGDVTRGKIALVENLAHLVIQNPEAVYERLS---- 70 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RC C SCP G + + + +++ Sbjct: 71 --RCLLCGGCNFSCPAGAPTMEIFLEARAIVV 100 >gi|225016887|ref|ZP_03706079.1| hypothetical protein CLOSTMETH_00800 [Clostridium methylpentosum DSM 5476] gi|224950376|gb|EEG31585.1| hypothetical protein CLOSTMETH_00800 [Clostridium methylpentosum DSM 5476] Length = 373 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 7/126 (5%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M ++ + + + + E R C CA C CP Sbjct: 246 MSSMEQLLDNTDFMQEFQPLTTEEQSVIQRAVEEIR--ASIAVPCTACAYCVAGCPKKIP 303 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA 244 + + L A + + Q +N + + C C ++CP+ + Sbjct: 304 IPNYF----ALYNAEKIAANKGFSIQQVYYENYTESYGKASDCIGCRQCERACPQHIKIV 359 Query: 245 KAIAKI 250 A+ + Sbjct: 360 DALQDV 365 >gi|74316237|ref|YP_313977.1| (S)-2-hydroxy-acid oxidase [Thiobacillus denitrificans ATCC 25259] gi|74055732|gb|AAZ96172.1| (S)-2-hydroxy-acid oxidase [Thiobacillus denitrificans ATCC 25259] Length = 1259 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 790 DCLRCGKCKPVCNTHIPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSLKHFDEFGDV 849 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ ++ +L + Sbjct: 850 --ADHCTICHKCKYPCPVDIDFGDVSIAMRNLLRRQG 884 >gi|332884673|gb|EGK04930.1| hypothetical protein HMPREF9456_00683 [Dysgonomonas mossii DSM 22836] Length = 941 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 13/135 (9%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 +++ + + + H+ I P + + +C+ C C +C + Sbjct: 499 IMLKIKNIFDPHKLINPGVIINENPKIHLENLKPLPAAND-IIDKCMECGFCEPNCVAEG 557 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPFRLYR---CHTIMNCTQSCP 238 L P + R + SR + GE RL + D + Y C T C CP Sbjct: 558 LT----LSPRQRIVIAREI--SRLKALGEDPSRLKQMLDDAKYYSDETCATDGLCGLVCP 611 Query: 239 KGLNPAKAIAKIKMM 253 ++ K I ++ Sbjct: 612 VKIDTGKFIKHVRHE 626 >gi|319645446|ref|ZP_07999678.1| YjgC protein [Bacillus sp. BT1B_CT2] gi|317392332|gb|EFV73127.1| YjgC protein [Bacillus sp. BT1B_CT2] Length = 1035 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 58/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 62 VEMEASEEQTVLQLLNNSSIEVPQICYHPSLGPIETCDTCIVSINGELKRSCSAEVKDGD 121 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + P L + + + + H +++ P K Sbjct: 122 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKVNHQSIPFDQKP 181 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + W D Sbjct: 182 YHKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 239 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 240 ------------SCVSCGHCSTVCP 252 >gi|270159420|ref|ZP_06188076.1| putative (NiFe) hydrogenase beta subunit [Legionella longbeachae D-4968] gi|289165769|ref|YP_003455907.1| hydrogenase subunit [Legionella longbeachae NSW150] gi|269987759|gb|EEZ94014.1| putative (NiFe) hydrogenase beta subunit [Legionella longbeachae D-4968] gi|288858942|emb|CBJ12868.1| putative hydrogenase subunit [Legionella longbeachae NSW150] Length = 380 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 22/111 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + + C+ C C++ CP+ + +S+ ++ DS Sbjct: 258 RWNEVAERCLSCGNCTSVCPTCFCHSEVEKPSLDGTHSEHQREWDSCFTAGHSYLSGKVI 317 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 RD+ + L + C C CP G++ + +A I Sbjct: 318 RDDTRKRYRQWLTHKVGSWFDQFDASGCVGCGRCVTWCPVGIDITEELAAI 368 >gi|239635947|ref|ZP_04676964.1| formate dehydrogenase, alpha subunit [Staphylococcus warneri L37603] gi|239598412|gb|EEQ80892.1| formate dehydrogenase, alpha subunit [Staphylococcus warneri L37603] Length = 989 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 53/203 (26%), Gaps = 29/203 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKG 109 D L + ++ P + S C +C + IDG AC + Sbjct: 13 DYLVEPGTNLLEFIRSRDTFVPAICYNESMGPIQTCDTCTVEIDGKIERACGTTIDRPMT 72 Query: 110 AIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELL 155 L + + + H +++ W + + + ++ Sbjct: 73 VNTTTDHVQASQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDEWGLQHQTYEYKEKPY 132 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +C++C C +C N + D + Sbjct: 133 EKDYGPFYRYDPNQCILCGRCVEACQDIEVNETISIDW--------------DREHPRVI 178 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 + + P C + C CP Sbjct: 179 WDNDVPINESSCVSCGQCATVCP 201 >gi|34496404|ref|NP_900619.1| NADH dehydrogenase subunit I [Chromobacterium violaceum ATCC 12472] gi|81656630|sp|Q7NZH3|NUOI_CHRVO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|34102257|gb|AAQ58623.1| NADH-ubiquinone oxidoreductase, chain I [Chromobacterium violaceum ATCC 12472] Length = 162 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L+V +F++ R I + H R+ +G C+ C C Sbjct: 15 ELVKGLMVTGRYFFA--RKITVQFPEEKTPISPRFRGLHAQRRYANGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + R+ ID L +C C ++CP Sbjct: 73 CPAMAISIESEQREDGTRRTSRYDID------------------LTKCIFCGFCEEACPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|332286601|ref|YP_004418512.1| iron-sulfur binding oxidase [Pusillimonas sp. T7-7] gi|330430554|gb|AEC21888.1| iron-sulfur binding oxidase [Pusillimonas sp. T7-7] Length = 1312 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 846 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSLKHWEEFEDV 905 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ +++ +L Sbjct: 906 --ADHCTVCHKCYNPCPVDIDFGDVSMEMRSLL 936 >gi|258627117|ref|ZP_05721913.1| RnfC-related protein [Vibrio mimicus VM603] gi|258580635|gb|EEW05588.1| RnfC-related protein [Vibrio mimicus VM603] Length = 820 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W +++ + E L+ L C Sbjct: 378 CIRCGQCADACPV-----------SLLPQQLQWHAKAQEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSDIPLVQYYRQAKAEIRTRSL 449 >gi|126730473|ref|ZP_01746284.1| formate dehydrogenase, alpha subunit [Sagittula stellata E-37] gi|126709206|gb|EBA08261.1| formate dehydrogenase, alpha subunit [Sagittula stellata E-37] Length = 939 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 34/177 (19%) Query: 82 EGICGSCGMNIDGTNTLACV------------------KDMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G LA K + + + V P + Sbjct: 59 DGNCRACMVEIEGERVLAASCIREPEDGMVVKSASARAKTARKMVMELLVADQPEQAAAH 118 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 D + ++ E T+ + L L C+ C C +C Sbjct: 119 DKSSHLWDMAAEQGVTESRFPTLEAERIP--LLDDSHVAMSVNLDACIQCGLCVRACREV 176 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D L D C C Q+CP G Sbjct: 177 QVND--VIGMAGRGHDAYPVFD------------LGDDMGASTCVACGECVQACPTG 219 >gi|68304951|gb|AAY89962.1| predicted DsrK [uncultured bacterium BAC13K9BAC] Length = 499 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-----------IDSRDE 209 R L C+ C C+ C Y D P R + Sbjct: 67 RSLRVYLDSCIQCGACTDKCHYYQGTKDPKNMPVGRQNLMRSVYRRYFTLPGKYFPKLVG 126 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + LED + Y C C CP G++ A+ + ++ Sbjct: 127 AKDLTKEVLEDWYSYYHQCSQCRRCAVFCPIGIDTAEISMAAREVM 172 >gi|124027874|ref|YP_001013194.1| hypothetical protein Hbut_1002 [Hyperthermus butylicus DSM 5456] gi|123978568|gb|ABM80849.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 409 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 33/101 (32%), Gaps = 9/101 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR-YLGPAILLQAYRWLIDSRDEFQGE 213 L + C+ C C+ C SY Y P L AY L+ Sbjct: 12 LIDEARMLAEEYHRACIGCLLCTPGCVSYRALGAARYSPPRRLRAAYHVLVKGSPTS--- 68 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ED +Y C CT CP G+ + + ++ L Sbjct: 69 -----EDIETIYTCTMCGACTILCPYGIEVWRVVLAARIKL 104 >gi|54295305|ref|YP_127720.1| hypothetical protein lpl2390 [Legionella pneumophila str. Lens] gi|53755137|emb|CAH16630.1| hypothetical protein lpl2390 [Legionella pneumophila str. Lens] Length = 379 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 22/111 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + D C+ C C+ CP+ + +S+ G + DS Sbjct: 257 RWDDVAERCLSCGNCTLVCPTCFCHSEVEKPGLDGCTSEHHREWDSCFTTGHTYLNGKII 316 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 RD+ + + L + C C CP G++ + +A I Sbjct: 317 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCVTWCPVGIDITEELAAI 367 >gi|296282517|ref|ZP_06860515.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Citromicrobium bathyomarinum JL354] Length = 526 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 4/79 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + L L+ Y+ D R E +G +DP Sbjct: 249 FTLGGFMREQVCIYMCP-WPRIQSAMLDEKSLIVTYK---DWRGEPRGSLKKAKKDPEHF 304 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 305 GDCIDCNQCVAVCPTGIDI 323 >gi|163783186|ref|ZP_02178180.1| heterodisulfide reductase [Hydrogenivirga sp. 128-5-R1-1] gi|159881520|gb|EDP75030.1| heterodisulfide reductase [Hydrogenivirga sp. 128-5-R1-1] Length = 436 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 32/125 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNS-----DRYLGPAILLQAYRWL----------- 203 + + L CV C C+ +C Y + D L PA R + Sbjct: 28 NAEVASYLEACVRCGLCAEACLFYMGENISGKIDPTLTPAYKADLLREIYKENYTLWGRL 87 Query: 204 ---------IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 I+ D + RL Y C CT+ CP G++ + +A ++ L Sbjct: 88 KKALGLGVKIEPEDLKEQVRLA-------FYTCTMCDRCTKVCPMGIDTPRLVAIVRSAL 140 Query: 255 LDRKI 259 + Sbjct: 141 TSAGL 145 >gi|126730281|ref|ZP_01746092.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Sagittula stellata E-37] gi|126709014|gb|EBA08069.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Sagittula stellata E-37] Length = 472 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 8/81 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + + + W + R + + L Sbjct: 203 FFFGGFAREQICIYACPWPRIQAAMMDEDTLTVAYRDWRGEPRGKGKAR--------DTL 254 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 255 GDCIDCNACVNVCPMGIDIRD 275 >gi|319893259|ref|YP_004150134.1| Formate dehydrogenase related protein [Staphylococcus pseudintermedius HKU10-03] gi|317162955|gb|ADV06498.1| Formate dehydrogenase related protein [Staphylococcus pseudintermedius HKU10-03] gi|323463694|gb|ADX75847.1| formate dehydrogenase, alpha subunit [Staphylococcus pseudintermedius ED99] Length = 978 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 29/194 (14%) Query: 60 LDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYP-- 115 L + + P++ S C +C + IDG AC + + P Sbjct: 22 LLEFIKEQQTFVPSICYNESLGPIQTCDTCAVEIDGKIERACGTTVQRSMVVNTTTQPVQ 81 Query: 116 ----------LPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKI 164 L + + + H +++ W + + + + + Sbjct: 82 DSQKEALDRILEKHQLYCTVCDYNNGNCEIHNTMDQWGLEHQTYEYKPKPYEVDFGPFYR 141 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C++C C C N + W D ++ D Sbjct: 142 YDPNQCILCGRCVEVCQDVQVNETLSIDWDREHPRVIWDND----------VSINDS--- 188 Query: 225 YRCHTIMNCTQSCP 238 C C CP Sbjct: 189 -SCVGCGQCATVCP 201 >gi|297195941|ref|ZP_06913339.1| iron-sulfur cluster binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153002|gb|EDY62744.2| iron-sulfur cluster binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 525 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + DP Y Sbjct: 323 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHEAK----NDPNSSLPYA 378 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 379 SSLCGACFDACPVKIDIPSLLVELRHQ 405 >gi|34496625|ref|NP_900840.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Chromobacterium violaceum ATCC 12472] gi|34102480|gb|AAQ58845.1| probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Chromobacterium violaceum ATCC 12472] Length = 477 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DP 221 + C CP Y L+ +Y ++R E +G R + Sbjct: 210 FTYLFAGFMREQVCKYMCP-YARFQSVMFDADTLIISY---DEARGEPRGARKKGTDPKE 265 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 266 QGLGSCINCSICVQVCPVGIDI 287 >gi|150017309|ref|YP_001309563.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium beijerinckii NCIMB 8052] gi|149903774|gb|ABR34607.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium beijerinckii NCIMB 8052] Length = 437 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 20/107 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D C+ C C +CP L+ + ++ R + Sbjct: 348 LALSKDAINSGEESPCIRCGRCVEACPM------------GLIPSMLSILGER-----HK 390 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM---LLDRK 258 ++ + L C +C +CP N + I K + +K Sbjct: 391 FKEAKEEYNLLNCIECGSCVYTCPAKRNIVQYIKYSKSQNLAMAQKK 437 >gi|225850474|ref|YP_002730708.1| oxido/reductase iron sulfur protein [Persephonella marina EX-H1] gi|225646647|gb|ACO04833.1| oxido/reductase iron sulfur protein [Persephonella marina EX-H1] Length = 412 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 9/94 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 ++CV C+ C + CP+Y + P L +ID L +D R + Sbjct: 14 AHQCVKCSACRSVCPTYSVVKEERSSPRGRLALAEAVIDG-------ILPLTDDIARQWN 66 Query: 227 -CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP + + + + + D+KI Sbjct: 67 ECAMCRRCEWICPNEVEYKEIMFRARYKA-DKKI 99 >gi|254487985|ref|ZP_05101190.1| formate dehydrogenase, alpha subunit [Roseobacter sp. GAI101] gi|214044854|gb|EEB85492.1| formate dehydrogenase, alpha subunit [Roseobacter sp. GAI101] Length = 922 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 57/218 (26%), Gaps = 40/218 (18%) Query: 47 TYYVD---LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLAC 100 ++ +D ++ M + + + P L C +C + I+G LA Sbjct: 6 SFTLDGEKVEAEVGMTIWEVANGRGLKIPHLCYTPEPGYRPDGNCRACMVEIEGERVLAA 65 Query: 101 VK------------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + + + + V P V D + IE Sbjct: 66 SCLREPADGMVVTTNNARAENARKMVMELLVTDQPVQDVAHD-KSSHLWDMAALNGIESS 124 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + LL L C+ C C +C N + Sbjct: 125 RFPKLEEGRIPLLDDSHVA-MRVNLDACIQCNLCVRACREVQVNDVIGMSGRGH------ 177 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 DS F + DP C C Q+CP G Sbjct: 178 --DSYPTFD------MADPMGASSCVACGECVQACPTG 207 >gi|254463956|ref|ZP_05077367.1| formate dehydrogenase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206684864|gb|EDZ45346.1| formate dehydrogenase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 924 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 51/175 (29%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKD--------------IKGAIAVYPLPHMSVIKDLVV 127 +G C +C + I+G TLA + + + L ++ Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPAEGMVVTTNNARAENARKMVMELLMADQPKREEAH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S + ++ PK + + +D L C+ C C +C Sbjct: 107 DRSSHMWDMAELNGVTESRFPKLEEGRIPLLDDSHIAMKVNLDACISCGLCVRACREVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D + DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHNAFPTFD------------IADPMGQSTCVACGECVQACPTG 207 >gi|218295768|ref|ZP_03496564.1| NADH-quinone oxidoreductase, chain I [Thermus aquaticus Y51MC23] gi|218243927|gb|EED10454.1| NADH-quinone oxidoreductase, chain I [Thermus aquaticus Y51MC23] Length = 182 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 14/109 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + H + +GL +C+ C+ C+ +CP+Y Y+ Sbjct: 16 YLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAI----YVE 71 Query: 193 PAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PA D GER + + L RC C ++CP G Sbjct: 72 PA--------ENDPENPVSAGERYAKVYEINML-RCIFCGLCEEACPTG 111 >gi|73661910|ref|YP_300691.1| formate dehydrogenase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123775385|sp|Q49ZN0|FDHL_STAS1 RecName: Full=Putative formate dehydrogenase SSP0601 gi|72494425|dbj|BAE17746.1| putative formate dehydrogenase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 984 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 53/203 (26%), Gaps = 29/203 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKG 109 D L + ++ P++ S C +C + IDG AC + Sbjct: 13 DYLVEPGTNLLQFIKSQDTFVPSICYNESLGPIQTCDTCTVEIDGKMERACSTTIDRPMI 72 Query: 110 AIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELL 155 L + + + H +++ W + + + ++ Sbjct: 73 VNTQNDKVQASQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDQWGLEHQTYEYKEKPY 132 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +C++C C C N + W D+ Sbjct: 133 EKDYGPFYRYDPNQCILCGRCVEVCQDVQVNETLTIDWERQQPRVIWDNDT--------- 183 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 ++ D C C CP Sbjct: 184 -SINDS----SCVGCGQCATVCP 201 >gi|302341919|ref|YP_003806448.1| molybdopterin oxidoreductase [Desulfarculus baarsii DSM 2075] gi|301638532|gb|ADK83854.1| molybdopterin oxidoreductase [Desulfarculus baarsii DSM 2075] Length = 376 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 43/164 (26%), Gaps = 23/164 (14%) Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH 136 RR G +I G ++ V P ++DL++ Sbjct: 88 RRLVASGAHNCLVCDIGGDKWQELQMEVMAQPWHDTVCPAWGDCRLQDLIIRYGVSMR-- 145 Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ + + C+ C C ++C N Sbjct: 146 ---------GVEPKIRQHPLDDDQPMIVRDFSRCIKCGRCVSACNDVQVNLAIAPPDEAA 196 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L+A D R + D + C C Q+CP G Sbjct: 197 LKAGLLESDWRP---------VVDYAK---CTHCGQCIQACPVG 228 >gi|283853855|ref|ZP_06371072.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio sp. FW1012B] gi|283570752|gb|EFC18795.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio sp. FW1012B] Length = 537 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + R + + L L Sbjct: 83 RSFKVFMDICVRCGACADKCHFFIGGGDPKNMPVLRAELLRSIYRGEFGGAAKILGKLAG 142 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 Y+C C+ CP G++ A+ I + LL Sbjct: 143 ARKLEEDVVKEWFMYFYQCTECRRCSLFCPYGIDTAE-ITMMARELL 188 >gi|253996808|ref|YP_003048872.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] gi|253983487|gb|ACT48345.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] Length = 476 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP-FRLYR 226 + C CP + S + +++ R E + R ++ L Sbjct: 215 AGFLREQVCKHMCPYARFQSAMFDNDTLIVT----YDQERGEPRSGRSRKVDAKQEGLGD 270 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 271 CIDCNFCVQVCPVGIDI 287 >gi|99082380|ref|YP_614534.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99038660|gb|ABF65272.1| iron-sulfur-binding protein; RdxA/RdxB/FixG family [Ruegeria sp. TM1040] Length = 476 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + + W + R + + + +L C M C Sbjct: 215 CIYACPWPRIQAAMMDEDTLTVGYRDWRGEPRGKHRKS-----AEAEQLGDCIDCMACVN 269 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 270 VCPMGIDIRD 279 >gi|262402292|ref|ZP_06078853.1| formate dehydrogenase-O major subunit [Vibrio sp. RC586] gi|262351074|gb|EEZ00207.1| formate dehydrogenase-O major subunit [Vibrio sp. RC586] Length = 1396 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 41/185 (22%), Gaps = 30/185 (16%) Query: 60 LDGLLYIKNKIDPTLTL---RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL 116 L ++ + + C CG + L + Sbjct: 541 LTAQQREQSFAEVEVGFNNTDAMAEAARCLECGCQANTDCDLRDYATEYQAEQHFTYSLE 600 Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 S E W + P + + C+ C C Sbjct: 601 -------------------VSSHEDWQQRRQQDPRHKYQVDRSGEFIVFDANRCISCGQC 641 Query: 177 STSCPSYWWNSD-RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 +C ++ R D R F G+ + RC C Q Sbjct: 642 IQACREQSVQGVLSFMQTEKGRPVVR--PDCRPNFGGQGV-----SMGDSRCVQCGACVQ 694 Query: 236 SCPKG 240 +CP G Sbjct: 695 ACPVG 699 >gi|217979516|ref|YP_002363663.1| D-lactate dehydrogenase (cytochrome) [Methylocella silvestris BL2] gi|217504892|gb|ACK52301.1| D-lactate dehydrogenase (cytochrome) [Methylocella silvestris BL2] Length = 989 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 11/128 (8%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRY 190 R + + C C CPSY D Sbjct: 534 LRYAPGYEVRDFAPQLSWAGYPGAVGGLQGAVEMCNNNGACRKLEGGAMCPSYRATRDEK 593 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + R + + D + + +L C + C + CP ++ +A++ Sbjct: 594 HVTRGRANSLRLALSGQLGADAFASDAMAETMKL--CVSCKACKRECPTSVD----MARM 647 Query: 251 KMMLLDRK 258 K+ ++ + Sbjct: 648 KIEVMAAR 655 >gi|283768913|ref|ZP_06341823.1| electron transport complex, RnfABCDGE type, C subunit [Bulleidia extructa W1219] gi|283104466|gb|EFC05840.1| electron transport complex, RnfABCDGE type, C subunit [Bulleidia extructa W1219] Length = 438 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 27/129 (20%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L+++ + W + S + E+ C+ C C CP Sbjct: 320 LMINGGPMMGRAIPNNQWSISQSTNGVTVMKHIKEEAI------NCLRCGACVDHCP--- 370 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + A DE + D+L R+ C CT CP ++ Sbjct: 371 -MGLEPVRIA-------------DEHKVVDYDHLV-KLRVTDCIECGLCTYVCPSKIDMT 415 Query: 245 KAIAKIKMM 253 + K++ Sbjct: 416 E---KMRRA 421 >gi|291285965|ref|YP_003502781.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] gi|290883125|gb|ADD66825.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] Length = 165 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + +SH + + + + + DG +CV C C Sbjct: 13 EILKGLSITLSHMFK--KPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKV 70 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPS + + GP ++ +D L RC C + CP Sbjct: 71 CPSECIHIETDCGPNGERLIRKYELD------------------LSRCIYCGYCEEVCPV 112 Query: 240 G 240 Sbjct: 113 D 113 >gi|206602052|gb|EDZ38534.1| NADH dehydrogenase, chain I [Leptospirillum sp. Group II '5-way CG'] Length = 186 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 18/123 (14%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +++ L + +H + + +++ + A R+ +G CV C C Sbjct: 12 FTEIMQGLKLTFTHMFKKKITVQY--PHEKLELADGYRGFIVHRRYENGQERCVGCDLCE 69 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ +A R + D E R RC C +C Sbjct: 70 AICPA---------------KAIRVVGDIHPEIPERRYAKEYTLD-FTRCIFCGFCVVAC 113 Query: 238 PKG 240 P Sbjct: 114 PVN 116 >gi|25028778|ref|NP_738832.1| putative oxidoreductase [Corynebacterium efficiens YS-314] gi|259507840|ref|ZP_05750740.1| D-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|23494064|dbj|BAC19032.1| putative oxidoreductase [Corynebacterium efficiens YS-314] gi|259164633|gb|EEW49187.1| D-lactate dehydrogenase [Corynebacterium efficiens YS-314] Length = 951 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 6/78 (7%) Query: 169 ECVMCACCST----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV + C + CPS+ D + + G R + + L Sbjct: 547 RCVGVSSCRSESGAMCPSFQITGDEVHSTRGRARVLSEMFRGESVTGGYRSEEVH--EAL 604 Query: 225 YRCHTIMNCTQSCPKGLN 242 C + C CP ++ Sbjct: 605 DLCLSCKACASECPVNVD 622 >gi|294083652|ref|YP_003550409.1| formate dehydrogenase subunit alpha [Candidatus Puniceispirillum marinum IMCC1322] gi|292663224|gb|ADE38325.1| formate dehydrogenase alpha subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 924 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 44/173 (25%), Gaps = 29/173 (16%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMS----------VIKDLVVDMSH 131 +G C +C + I+G LA + + V H + ++ D S Sbjct: 50 DGNCRACMVEIEGERVLAASCI-RAPSEGMVVNSQNHRATTARKMVMELLVSDQPARESA 108 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID----GLYECVMCACCSTSCPSYWWNS 187 + S E + C+ C C +C N Sbjct: 109 HDPDSELWKYAETQDVESGRFPARMSAEPDSSHPAIAVNMDACIQCGLCVRACREVQVND 168 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G A + D D C C Q+CP G Sbjct: 169 --VIGLAGRGADAHIVFD------------FGDDMGASTCVGCGECVQACPTG 207 >gi|149280562|ref|ZP_01886678.1| NADH dehydrogenase I chain I [Pedobacter sp. BAL39] gi|149228677|gb|EDM34080.1| NADH dehydrogenase I chain I [Pedobacter sp. BAL39] Length = 167 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L + SH + + +I V + + H ++ DG C C C+ SC Sbjct: 27 IAKGLTITFSHLFKKEATIRY--PEVQREFSTNFRGMHSLKRDEDGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ Q YR E+ ++ + L RC C ++CPK Sbjct: 85 PAEAITMIAAERKPEEKQLYR----------EEKYASVYEINML-RCIFCGLCEEACPKE 133 >gi|110681349|ref|YP_684356.1| formate dehydrogenase, alpha subunit [Roseobacter denitrificans OCh 114] gi|109457465|gb|ABG33670.1| formate dehydrogenase, alpha subunit [Roseobacter denitrificans OCh 114] Length = 925 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 42/175 (24%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKD------IKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 +G C +C + I+G LA + M + L + Sbjct: 47 DGNCRACMVEIEGERVLAASCIREPSEGMVVTTDTHRAESARKMVMELLLADQPEREVAH 106 Query: 136 HRSIEPWLKTVSPKPAKELLQSHED----------RQKIDGLYECVMCACCSTSCPSYWW 185 +S W E+ L C+ C C +C Sbjct: 107 DKSSHLWDMADENGIDVSRFPKLEEGRIPLLDDSHVAMSVNLDACIQCGLCVRACRDVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A D DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPTFD------------FADPMGESTCVACGECVQACPTG 207 >gi|317403754|gb|EFV84238.1| ferredoxin [Achromobacter xylosoxidans C54] Length = 496 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFR 223 G + + C CP Y + P + Y + D R + Sbjct: 226 WGNAGFMRESVCKYMCP-YARFQSVMVDPDTFVVTYDKRRGDPRGGRSRKVDHKAA---G 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 282 LGDCVDCSLCVQVCPTGIDIRDGLQYM 308 >gi|149190373|ref|ZP_01868645.1| electron transport complex protein RnfC [Vibrio shilonii AK1] gi|148835752|gb|EDL52717.1| electron transport complex protein RnfC [Vibrio shilonii AK1] Length = 934 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L ++ + C+ C+ C+ +CP+ ++L Q +W Sbjct: 353 PITKTANCILAPTYREIDPRSHEMSCIRCSQCAEACPA-----------SLLPQQLQWYA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 S++ + E L+ L C C CP + + K + RK Sbjct: 402 KSQEYDKCEELN-------LKDCIECGACAFVCPSEIPLVHYYRQAKAEIRTRK 448 >gi|326799008|ref|YP_004316827.1| NAD(P)H-quinone oxidoreductase subunit I [Sphingobacterium sp. 21] gi|326549772|gb|ADZ78157.1| NAD(P)H-quinone oxidoreductase subunit I [Sphingobacterium sp. 21] Length = 169 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++K + V + HF+ + ++ V +K H ++ +G C C C+ SC Sbjct: 27 ILKGMRVTIRHFFRKKATVSY--PEVERPYSKNYRGMHSLKRDEEGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E+ + + L RC C ++CPK Sbjct: 85 PAEAITMISAERKKGEEHLYR----------EEKYAAVYEINML-RCIFCGLCEEACPKE 133 >gi|296119954|ref|ZP_06838508.1| oxidoreductase, FAD-binding [Corynebacterium ammoniagenes DSM 20306] gi|295967108|gb|EFG80379.1| oxidoreductase, FAD-binding [Corynebacterium ammoniagenes DSM 20306] Length = 972 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 6/107 (5%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----SCPSYWWNSDRYLGPAI 195 + + S + ++ + CV + C + CPS+ D Sbjct: 524 RMAPGQRTFEITPVHKFSQDKGSMVNAVNRCVGVSACRSEEDSMCPSFQITGDEVHSTRG 583 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + R E + ++ E L C + C CP ++ Sbjct: 584 RARLLSEMF--RGESVTDGYESKEVLEALDLCLSCKACASECPVNVD 628 >gi|163737223|ref|ZP_02144641.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Phaeobacter gallaeciensis BS107] gi|161389827|gb|EDQ14178.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Phaeobacter gallaeciensis BS107] Length = 510 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 22/81 (27%), Gaps = 8/81 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-- 224 C +CP + + + W + R + + D L Sbjct: 237 FGGFAREQICIYACPWPRIQAAMMDEDTLTVGYREWRGEPRGKPRKT------DEPGLVH 290 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 291 GDCIDCMACVNVCPMGIDIRD 311 >gi|126739533|ref|ZP_01755225.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. SK209-2-6] gi|126719179|gb|EBA15889.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. SK209-2-6] Length = 446 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 2/81 (2%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + +++ W + R + ++ + +P Sbjct: 171 FFFGGFAREQICIYACPWPRIQAAMMDEDTLVVGYRDWRGEPRGKLNKKQQEAGAEPKG- 229 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 230 -DCIDCMACVNVCPVGIDIRD 249 >gi|52549641|gb|AAU83490.1| heterodisulfide reductase subunit C [uncultured archaeon GZfos29E12] Length = 198 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 12/104 (11%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + + + L C C+ C+ CP + P ++Q + Sbjct: 6 ELDPNFKEEIMNERGGEHLTACFQCSTCTIGCPITEYVPS--YNPRKIIQMSLLGM---- 59 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + L +P L+ C CT CP+ + + + I+ Sbjct: 60 -----RKEVLSNPD-LWVCLICQTCTARCPQDVRISDLLGAIRR 97 >gi|312115139|ref|YP_004012735.1| D-lactate dehydrogenase (cytochrome) [Rhodomicrobium vannielii ATCC 17100] gi|311220268|gb|ADP71636.1| D-lactate dehydrogenase (cytochrome) [Rhodomicrobium vannielii ATCC 17100] Length = 967 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 7/107 (6%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQ 198 K A + ++ C A C T+ CPS+ D P Sbjct: 533 KAADAPVALTWEAEATPARALEHARRCAGHALCRTAEQRFACPSFAMTHDERDSPRGRAG 592 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R + S+ + L + L C + C +CP G++ K Sbjct: 593 TVRLALSSQLGDEALGSPALLETMAL--CVSCKACGSACPFGIDIPK 637 >gi|298487794|ref|ZP_07005835.1| cbb3-type cytochrome c oxidase accessory protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157886|gb|EFH98965.1| cbb3-type cytochrome c oxidase accessory protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 468 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ +R E +G R + L C M C Sbjct: 220 CIYMCPYARFQSVMFDKDTLIIS----YDQNRGEARGPRKKEADPQALGLGDCIDCMMCV 275 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 276 QVCPTGIDIRD 286 >gi|254830988|ref|ZP_05235643.1| hypothetical protein Lmon1_06498 [Listeria monocytogenes 10403S] Length = 995 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|158320804|ref|YP_001513311.1| electron transport complex, RnfABCDGE type, C subunit [Alkaliphilus oremlandii OhILAs] gi|158141003|gb|ABW19315.1| electron transport complex, RnfABCDGE type, C subunit [Alkaliphilus oremlandii OhILAs] Length = 442 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + V K +L E+ +I +C+ C C CP Sbjct: 332 MMGFAQHSVDVVITKGGSGVLVFDENEARIPDPQQCIRCGKCVDICPVSIQP-------- 383 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + AY E+ L+ C +C+ CP ++I K + Sbjct: 384 VQISAYSLNN---MMEHAEKYRALD-------CIECGSCSFICPSKRPLLQSIRVAKREI 433 Query: 255 LDRK 258 + +K Sbjct: 434 VAKK 437 >gi|117923998|ref|YP_864615.1| electron transport complex, RnfABCDGE type, C subunit [Magnetococcus sp. MC-1] gi|117607754|gb|ABK43209.1| electron transport complex, RnfABCDGE type, C subunit [Magnetococcus sp. MC-1] Length = 605 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 18/77 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C CP ++ WL + ++ D L D L+ C Sbjct: 373 PCIRCAKCVNVCPMSLMPNE-----------MAWL------AKNDQFDALADHD-LFDCI 414 Query: 229 TIMNCTQSCPKGLNPAK 245 C+ CP + Sbjct: 415 ECGTCSYVCPSSIPLVH 431 >gi|311107540|ref|YP_003980393.1| cytochrome C oxidase accessory protein CcoG [Achromobacter xylosoxidans A8] gi|310762229|gb|ADP17678.1| cytochrome c oxidase accessory protein CcoG [Achromobacter xylosoxidans A8] Length = 496 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFR 223 G + + C CP Y + P + Y + D R + Sbjct: 226 WGNAGFMRESVCKYMCP-YARFQSVMVDPDTFVVTYDKRRGDPRGGRSRKVDHKAA---G 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 282 LGDCVDCSLCVQVCPTGIDIRDGLQYM 308 >gi|289550091|ref|YP_003470995.1| Formate dehydrogenase related protein [Staphylococcus lugdunensis HKU09-01] gi|315659277|ref|ZP_07912141.1| NAD-dependent formate dehydrogenase [Staphylococcus lugdunensis M23590] gi|289179623|gb|ADC86868.1| Formate dehydrogenase related protein [Staphylococcus lugdunensis HKU09-01] gi|315495702|gb|EFU84033.1| NAD-dependent formate dehydrogenase [Staphylococcus lugdunensis M23590] Length = 984 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 29/203 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVK------- 102 D L + +N P++ S C +C + IDG AC Sbjct: 13 DYLVEPGTNLLEFIKSRNTFVPSICYNESMGPIQTCDTCMVEIDGQIERACSTTIDRPMT 72 Query: 103 ------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELL 155 ++K + L + + + H +++ W + + + ++ Sbjct: 73 VNTENNEVKSSQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDEWGLQHQTYEYKEKPY 132 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +C++C C +C N + D + Sbjct: 133 EKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDW--------------DREHPRVI 178 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 + + P C + C CP Sbjct: 179 WDNDVPINESSCVSCGQCATVCP 201 >gi|121729986|ref|ZP_01682403.1| RnfC-related protein [Vibrio cholerae V52] gi|147674223|ref|YP_001216487.1| electron transport complex protein RnfC [Vibrio cholerae O395] gi|262167228|ref|ZP_06034940.1| electron transport complex protein RnfC [Vibrio cholerae RC27] gi|121628272|gb|EAX60785.1| RnfC-related protein [Vibrio cholerae V52] gi|146316106|gb|ABQ20645.1| RnfC-related protein [Vibrio cholerae O395] gi|262024372|gb|EEY43061.1| electron transport complex protein RnfC [Vibrio cholerae RC27] Length = 773 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|121587381|ref|ZP_01677151.1| RnfC-related protein [Vibrio cholerae 2740-80] gi|153819295|ref|ZP_01971962.1| RnfC-related protein [Vibrio cholerae NCTC 8457] gi|153823435|ref|ZP_01976102.1| RnfC-related protein [Vibrio cholerae B33] gi|255745440|ref|ZP_05419388.1| electron transport complex protein RnfC [Vibrio cholera CIRS 101] gi|262151308|ref|ZP_06028443.1| electron transport complex protein RnfC [Vibrio cholerae INDRE 91/1] gi|17369132|sp|Q9KT88|RNFC_VIBCH RecName: Full=Electron transport complex protein rnfC gi|121548384|gb|EAX58446.1| RnfC-related protein [Vibrio cholerae 2740-80] gi|126510155|gb|EAZ72749.1| RnfC-related protein [Vibrio cholerae NCTC 8457] gi|126519044|gb|EAZ76267.1| RnfC-related protein [Vibrio cholerae B33] gi|255736515|gb|EET91912.1| electron transport complex protein RnfC [Vibrio cholera CIRS 101] gi|262030924|gb|EEY49553.1| electron transport complex protein RnfC [Vibrio cholerae INDRE 91/1] Length = 774 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|327401971|ref|YP_004342810.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317479|gb|AEA48095.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus veneficus SNP6] Length = 309 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 17/108 (15%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAYRWLID-- 205 L + ED C+ C C+ CP+ + + Q + + Sbjct: 194 WLKDAFEDEVWEKVARFCIGCGVCTYLCPTCHCFDITDSGNVRIRTWDSCQFPYFTMHTS 253 Query: 206 ---SRDEFQGERLDNLEDP-------FRLYRCHTIMNCTQSCPKGLNP 243 R E + + + + C C + CP ++ Sbjct: 254 GHNPRPEKKHRLRNRIYHKFSYFPERHGFFACVGCGRCVRMCPSRIDI 301 >gi|163736778|ref|ZP_02144196.1| formate dehydrogenase, alpha subunit [Phaeobacter gallaeciensis BS107] gi|161389382|gb|EDQ13733.1| formate dehydrogenase, alpha subunit [Phaeobacter gallaeciensis BS107] Length = 924 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 48/178 (26%), Gaps = 36/178 (20%) Query: 82 EGICGSCGMNIDGTNTLACVK------------------DMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + + V P + Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPAEGMVVTTNNARAENARKMVMELLVADQPKKEEAR 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPS 182 D SH + + + L C+ C C +C Sbjct: 107 D---KSSHLWDMAELNGVSESRFPKLEKDRIPLLDDSHVAMKVNLDACISCNLCVRACRE 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP C C Q+CP G Sbjct: 164 VQVND--VIGMAGRGHDAYPVFD------------IADPMGASSCVACGECVQACPTG 207 >gi|144900499|emb|CAM77363.1| Nitrogen fixation protein fixG [Magnetospirillum gryphiswaldense MSR-1] Length = 439 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 12/159 (7%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 S MN++ A K + A + + L + + I Sbjct: 94 DRSARMNLERAPWTAQKIVKKAVIQAGWLAVSAACGIAFVL--YFGDAFQMMKDIFTLEA 151 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 +V ++ L C CP + S + ++++ W Sbjct: 152 SVGVYSFIAIIGGFC-----YLLAGFAREQVCLYMCPYSRFQSAMFDEHSLIISYEEWRG 206 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + R + + C C Q CP G++ Sbjct: 207 EPRAPARKG-----QSFEGRGHCIDCKMCVQVCPTGIDI 240 >gi|254848145|ref|ZP_05237495.1| electron transport complex protein RnfC [Vibrio cholerae MO10] gi|298498872|ref|ZP_07008679.1| electron transport complex protein RnfC [Vibrio cholerae MAK 757] gi|254843850|gb|EET22264.1| electron transport complex protein RnfC [Vibrio cholerae MO10] gi|297543205|gb|EFH79255.1| electron transport complex protein RnfC [Vibrio cholerae MAK 757] Length = 776 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 380 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 421 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 422 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 451 >gi|119357071|ref|YP_911715.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354420|gb|ABL65291.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeobacteroides DSM 266] Length = 276 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 9/96 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C +CP + + +W+ S + + Sbjct: 158 FWQSEFSKCIKCYACRQACPMCYCRRC-----IVDCNQPQWVNTSSHTLGNFEWNIVRAF 212 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC NC +SCP + + + Sbjct: 213 HLAGRCVECGNCDRSCPVNIPL----RLLNRRMAKE 244 >gi|240141433|ref|YP_002965913.1| Tungsten-containing formate dehydrogenase alpha subunit [Methylobacterium extorquens AM1] gi|22652728|gb|AAN03799.1|AF489516_2 tungsten-containing formate dehydrogenase alpha subunit [Methylobacterium extorquens] gi|240011410|gb|ACS42636.1| Tungsten-containing formate dehydrogenase alpha subunit [Methylobacterium extorquens AM1] Length = 989 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 52/250 (20%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD---LDNCGPMVLDGLLYIKNKID 71 G+ P+G +K D P + D ++ + + Sbjct: 48 GQAAPDPSGSYGIK---------DAPVAPATIAFEFDGQQVEAQPGETIWAVAKRLGTHI 98 Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACV------------------KDMKDIKGA 110 P L + C +C + I+G LA + + Sbjct: 99 PHLCHKPDPGYRPDGNCRACMVEIEGERVLAASCKRTPAIGMKVKSATERATKARAMVLE 158 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P + D SHF+ Q ++ A+ L C Sbjct: 159 LLVADQPERATSHD---PSSHFWVQADVLDV--TESRFPAAERWTSDVSHPAMSVNLDAC 213 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N ++ AYR + + + +DP C Sbjct: 214 IQCNLCVRACREVQVND-------VIGMAYR-------AAGSKVVFDFDDPMGGSTCVAC 259 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 260 GECVQACPTG 269 >gi|325570424|ref|ZP_08146201.1| electron transport complex protein RnfC [Enterococcus casseliflavus ATCC 12755] gi|325156634|gb|EGC68811.1| electron transport complex protein RnfC [Enterococcus casseliflavus ATCC 12755] Length = 445 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E+ + C+ C C +CP P + Q YR + D + E L Sbjct: 355 FNEETDWLYAENPCIRCNKCVEACPMRLM-------PMEIDQFYR----AGDYQKCEELL 403 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CT CP + A I K + Sbjct: 404 A-------EACINCGACTFVCPAKRSLAANITAAKGKVAQ 436 >gi|307823818|ref|ZP_07654046.1| electron transport complex, RnfABCDGE type, C subunit [Methylobacter tundripaludum SV96] gi|307735112|gb|EFO05961.1| electron transport complex, RnfABCDGE type, C subunit [Methylobacter tundripaludum SV96] Length = 495 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 22/92 (23%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--PFRLYR 226 C+ CA C + CP+ + D R++ L+ L Sbjct: 372 PCIRCAGCVSVCPA--------------------GLRPLDMANNIRINQLDAAVDLGLKD 411 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + C+ CP + + ++ R+ Sbjct: 412 CISCGCCSYICPSNIPLVQFFKYASGEVIARQ 443 Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 13/33 (39%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C CP GL P I++ LD + Sbjct: 373 CIRCAGCVSVCPAGLRPLDMANNIRINQLDAAV 405 >gi|257866189|ref|ZP_05645842.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC30] gi|257872520|ref|ZP_05652173.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC10] gi|257800123|gb|EEV29175.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC30] gi|257806684|gb|EEV35506.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Enterococcus casseliflavus EC10] Length = 445 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E+ + C+ C C +CP P + Q YR + D + E L Sbjct: 355 FNEETDWLYAENPCIRCNKCVEACPMRLM-------PMEIDQFYR----AGDYQKCEELL 403 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CT CP + A I K + Sbjct: 404 A-------EACINCGACTFVCPAKRSLAANITAAKGKVAQ 436 >gi|93005610|ref|YP_580047.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92393288|gb|ABE74563.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 469 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 31/118 (26%), Gaps = 7/118 (5%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 Y+ + I + + C CP Y Sbjct: 175 GTDALYNSWQMIG--FIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICP-YGRFQ 231 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L+ +Y + R E +G R +P L C C Q CP G++ Sbjct: 232 SVMFDKDTLIVSYDYE---RGEPRGARKKG-TNPENLGDCIECQMCVQVCPTGIDIRD 285 >gi|27904613|ref|NP_777739.1| electron transport complex protein RnfC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396891|sp|Q89AW8|RNFC_BUCBP RecName: Full=Electron transport complex protein rnfC gi|27904010|gb|AAO26844.1| electron transport complex protein RnfC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 505 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 47/175 (26%), Gaps = 33/175 (18%) Query: 98 LACVKDMKDIKGAIAV-YPLPHMS-----VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 L K + + + P+ H+ K L V++ + + Sbjct: 312 LYGDKFLPSKNVLVRIGTPISHLMKIYKLNEKTLKVNIGGPITGLLIRNFNFSVLKTNNC 371 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+ CA CS SCP Q Y + S E Sbjct: 372 IMFVSIQNNELNNFEEKNCIRCAACSYSCPMNLLPE----------QLYWYSKHSNHEKT 421 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK---------AIAKIKMMLLDR 257 + + C C Q CP + +IAK K + + Sbjct: 422 Q--------IYNIQDCIECGICEQVCPSDIPLMSYYRREKKQISIAKFKNYQIKK 468 >gi|317486040|ref|ZP_07944894.1| heterodisulfide reductase subunit C [Bilophila wadsworthia 3_1_6] gi|316922718|gb|EFV43950.1| heterodisulfide reductase subunit C [Bilophila wadsworthia 3_1_6] Length = 189 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + + C C C+ CP + L + +++A + + Sbjct: 19 EAESGQKVTNCYQCGNCTAGCP---CGPEYDLQVSQVMRAVQLGN----------KEMAL 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C + CT CP ++ AK + ++ M Sbjct: 66 SSRSLWLCVSCSTCTSRCPNNIDVAKVMDVLRHMAWKEG 104 >gi|219871790|ref|YP_002476165.1| electron transport complex protein RnfC [Haemophilus parasuis SH0165] gi|219691994|gb|ACL33217.1| electron transport complex protein RnfC/NADH:ubiquinone oxidoreductase, subunit RnfC [Haemophilus parasuis SH0165] Length = 666 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 30/117 (25%), Gaps = 23/117 (19%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ + H + + C+ C+ CS +CP Y Sbjct: 352 QSPITKTANCIIAPDHFEYAPPEPERNCIRCSSCSDACPVGLLPQQLYWFARAED----- 406 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ + + L C C CP + I + KI Sbjct: 407 ----HDKSK---------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 445 >gi|254456592|ref|ZP_05070021.1| formate dehydrogenase, alpha subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207083594|gb|EDZ61020.1| formate dehydrogenase, alpha subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 922 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 22/117 (18%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 SPK K + + L C+ C C +C L + + Sbjct: 136 NSPKQHKGIPRDTSHDYMRMNLDNCINCGRCVRACDEIQ--GSFVLTMSGRG------FE 187 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI---KMMLLDRKI 259 SR + + F C + C +CP AI+ + K +D+K+ Sbjct: 188 SRITTDNDMM------FGDSSCVSCGACAHTCP-----TDAISDVFQSKSAAVDKKV 233 >gi|163782134|ref|ZP_02177133.1| hypothetical protein HG1285_18414 [Hydrogenivirga sp. 128-5-R1-1] gi|159882666|gb|EDP76171.1| hypothetical protein HG1285_18414 [Hydrogenivirga sp. 128-5-R1-1] Length = 244 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + L+ C+ C C+ SCPS + P ++Q R+L E E + ++ Sbjct: 34 DFRFKEFLFGCLNCGVCTASCPSNRFFD---YSPREIVQ--RFL-----EEDVEVVYDMM 83 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C C CP NP + ++ + + Sbjct: 84 HEY-IWACSQCFTCWIRCPFVNNPGGLVIIMREVAVR 119 >gi|78188770|ref|YP_379108.1| oxidoreductase, FAD-binding [Chlorobium chlorochromatii CaD3] gi|78170969|gb|ABB28065.1| oxidoreductase, FAD-binding protein [Chlorobium chlorochromatii CaD3] Length = 1214 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 11/97 (11%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T C Y+ + P A L D++ E + Sbjct: 768 DYCIRCGKCKTDCCVYYPARGMFYHPRNKNLAIGSLIEALLFDAQRERSTDFALLQWLEE 827 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP ++ + +L+RKI Sbjct: 828 VADHCTICHKCLKPCPVDIDTGEV------SVLERKI 858 >gi|327398432|ref|YP_004339301.1| Lactate utilization protein B/C [Hippea maritima DSM 10411] gi|327181061|gb|AEA33242.1| Lactate utilization protein B/C [Hippea maritima DSM 10411] Length = 684 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 169 ECVMCACCSTSCPSYWW------NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C +CP Y + Y GP +L ++ D + N+ Sbjct: 295 YCIHCGACQNACPVYTTVSGKLFRGNSYAGPVGVLLSFAAS----DTPNIREVANM---- 346 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C M C + C +N + I IK Sbjct: 347 ----CIGCMACDEICSSRINIQELILSIKAKYTK 376 >gi|322515041|ref|ZP_08068049.1| electron transport complex protein RnfC [Actinobacillus ureae ATCC 25976] gi|322118921|gb|EFX91098.1| electron transport complex protein RnfC [Actinobacillus ureae ATCC 25976] Length = 604 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 30/113 (26%), Gaps = 21/113 (18%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + ++ + H + + C+ C+ CS +CP Y Sbjct: 355 KSLQAPITKTANCIIAPDHFEYAPPEPERSCIRCSSCSDACPVGLLPQQLYWFSRS---- 410 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D D+ + + L C C CP + I + Sbjct: 411 -----DDHDKSK---------EYHLDACIECGVCAYVCPSYIPL---IQYFRQ 446 >gi|284996595|ref|YP_003418362.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|284444490|gb|ADB85992.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 750 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y ++ P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNNIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL E F C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RLFTGETNFEF--CFGCASCQEACPVGINISNLMETL 375 >gi|260867830|ref|YP_003234232.1| fused putative pyruvate-flavodoxin oxidoreductase: hypothetical protein/hypothetical protein/FeS binding protein [Escherichia coli O111:H- str. 11128] gi|257764186|dbj|BAI35681.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O111:H- str. 11128] gi|323178140|gb|EFZ63719.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 1180] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPTWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|260855108|ref|YP_003228999.1| fused putative pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O26:H11 str. 11368] gi|257753757|dbj|BAI25259.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O26:H11 str. 11368] gi|323157325|gb|EFZ43442.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli EPECa14] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPTWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|290892750|ref|ZP_06555742.1| formate dehydrogenase [Listeria monocytogenes FSL J2-071] gi|290557810|gb|EFD91332.1| formate dehydrogenase [Listeria monocytogenes FSL J2-071] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|227829240|ref|YP_002831019.1| iron-sulfur protein, [Sulfolobus islandicus L.S.2.15] gi|227455687|gb|ACP34374.1| iron-sulfur protein, putative [Sulfolobus islandicus L.S.2.15] Length = 750 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 17/117 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 ++ I + K + ++ + +C+ C+ C SC +Y ++ P Sbjct: 276 KEYEEIHKDILKNFKKYEIRVRSRRINKNIVIEASKCINCSLCLDSCLAYNTTNNIIYSP 335 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ RL E F C +C ++CP G+N + + + Sbjct: 336 LG-----RFN----------RLFTGETNFEF--CFGCASCQEACPVGINISNLMETL 375 >gi|284039907|ref|YP_003389837.1| D-lactate dehydrogenase (cytochrome) [Spirosoma linguale DSM 74] gi|283819200|gb|ADB41038.1| D-lactate dehydrogenase (cytochrome) [Spirosoma linguale DSM 74] Length = 1009 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 9/110 (8%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGPAIL 196 + P + ++D+ + +C C T CPSY D Sbjct: 550 EAGQQTPDFKTYFRYKDQNVLQHAEQCNGSGDCRKTEASGGTMCPSYMATRDEKDTTRAR 609 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ + R D+ E C + C CP ++ AK Sbjct: 610 ANILREML--TRSTKENRFDHEEIKATYDLCLSCKGCKNECPSNVDVAKL 657 >gi|171321556|ref|ZP_02910492.1| FAD linked oxidase domain protein [Burkholderia ambifaria MEX-5] gi|171093171|gb|EDT38383.1| FAD linked oxidase domain protein [Burkholderia ambifaria MEX-5] Length = 772 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 288 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFNDV 347 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 348 --ADHCTVCHKCATPCPVKIDFGDVTMNMRNLL 378 >gi|291515633|emb|CBK64843.1| Fe-S oxidoreductase [Alistipes shahii WAL 8301] Length = 593 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 14/111 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S++ I + + + E + C C C C + Sbjct: 238 FSRYMHIFTEIPLIFLRRYNLRSGEKESSYDNFQVEACSRCGICIDPCQLQSVLGVDDVQ 297 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 L+ R+ + RL + C C + CP G++ Sbjct: 298 SVYFLRDRRYNM--------LRLQTAD------NCLMCGRCAEKCPVGIDL 334 >gi|154685660|ref|YP_001420821.1| YjgC [Bacillus amyloliquefaciens FZB42] gi|154351511|gb|ABS73590.1| YjgC [Bacillus amyloliquefaciens FZB42] Length = 996 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 60/205 (29%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C +N++G +C +KD Sbjct: 23 VEMEAPDGQTVLQLLNNSSIDVPHVCYHPSLGPIETCDTCIVNVNGELVRSCSAQIKDGD 82 Query: 109 GAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + L + + + + H +++ P K Sbjct: 83 VIDTLSSDVKKAQIIGMDNILHNHELYCTVCDYNNGSCEVHNTVKEMKINHQSIPFDQKP 142 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + R + D +D E Sbjct: 143 YPKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLSIDWERKRP--RVIWD-QDVPINE 199 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 200 S-----------SCVSCGHCSTVCP 213 >gi|237731645|ref|ZP_04562126.1| pyruvate-flavodoxin oxidoreductase [Citrobacter sp. 30_2] gi|226907184|gb|EEH93102.1| pyruvate-flavodoxin oxidoreductase [Citrobacter sp. 30_2] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|192973039|gb|ACF06939.1| D-lactate dehydrogenase GlcD [uncultured Roseobacter sp.] Length = 937 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 12/128 (9%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGL-YECVMCACCSTS-----CPSYWWNSDRY 190 R+I W K SP+ + + + G C C S CPS+ Sbjct: 514 RAITRWPKNYSPQTPDTVFDWNAWPGGLAGAVEMCNNNGACRKSVGGVMCPSFRVTGAEK 573 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R + + D++ D L C C CP ++ +AK+ Sbjct: 574 DLTRGRANVLRLALTGQLGDDAFASDDMADAMAL--CVGCKACKSECPMSID----MAKM 627 Query: 251 KMMLLDRK 258 K + + Sbjct: 628 KTEVQSAR 635 >gi|157145676|ref|YP_001452995.1| hypothetical protein CKO_01425 [Citrobacter koseri ATCC BAA-895] gi|157082881|gb|ABV12559.1| hypothetical protein CKO_01425 [Citrobacter koseri ATCC BAA-895] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|150403061|ref|YP_001330355.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus maripaludis C7] gi|150034091|gb|ABR66204.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus maripaludis C7] Length = 375 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 52/182 (28%), Gaps = 27/182 (14%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMS 130 R C C + + LAC + + V ++K+ + Sbjct: 179 GRRSNCQRCELKVPRNADLACGNWGAEKGWTFVEVSSEKGEELLKNAQKEGYINVKAPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSY----W 184 IE + + K KE L + Y C+ C C CP Sbjct: 239 KALEIRGKIEKSMINLGKKFQKEHLDEKYPSNEKWNEYWSRCIKCYGCRDVCPICFCKEC 298 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + YL + D FQG RL ++ + C C CP + + Sbjct: 299 ALGEDYLDKGTIP------PDP-VMFQGIRLSHMS-----FSCINCGQCEDVCPVEIPLS 346 Query: 245 KA 246 K Sbjct: 347 KI 348 >gi|124515808|gb|EAY57317.1| NADH dehydrogenase, chain I [Leptospirillum rubarum] Length = 186 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 18/123 (14%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +++ L + +H + + +++ + A R+ +G CV C C Sbjct: 12 FTEIMQGLKLTFTHMFKKKITVQY--PHEKLELADGYRGFIVHRRYENGQERCVGCDLCE 69 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ +A R + D EF R RC C +C Sbjct: 70 AICPA---------------KAIRVVGDIHPEFPERRFAKEYTLD-FTRCIFCGFCVVAC 113 Query: 238 PKG 240 P Sbjct: 114 PVN 116 >gi|73541725|ref|YP_296245.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72119138|gb|AAZ61401.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 490 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 8/104 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P A +L G + C CP Y + + Y Sbjct: 203 GPWQAFWMLFY---AFATWGNAGFMREQVCKYMCP-YARFQSVMVDRDTYVVTYDV---G 255 Query: 207 RDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 R E +G R ++ L C C Q CP G++ + Sbjct: 256 RGEPRGSRSRKVDHHQAGLGDCVNCSICVQVCPTGIDIRDGLQY 299 >gi|47096769|ref|ZP_00234352.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|254900960|ref|ZP_05260884.1| formate dehydrogenase Alpha subunit [Listeria monocytogenes J0161] gi|254913826|ref|ZP_05263838.1| formate dehydrogenase [Listeria monocytogenes J2818] gi|254938215|ref|ZP_05269912.1| formate dehydrogenase [Listeria monocytogenes F6900] gi|47014855|gb|EAL05805.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|258610827|gb|EEW23435.1| formate dehydrogenase [Listeria monocytogenes F6900] gi|293591843|gb|EFG00178.1| formate dehydrogenase [Listeria monocytogenes J2818] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|226225132|ref|YP_002759239.1| formate dehydrogenase alpha chain [Listeria monocytogenes Clip81459] gi|254826313|ref|ZP_05231314.1| formate dehydrogenase [Listeria monocytogenes FSL J1-194] gi|254854412|ref|ZP_05243760.1| formate dehydrogenase [Listeria monocytogenes FSL R2-503] gi|255519930|ref|ZP_05387167.1| formate dehydrogenase alpha chain [Listeria monocytogenes FSL J1-175] gi|300766085|ref|ZP_07076053.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes FSL N1-017] gi|225877594|emb|CAS06308.1| Putative formate dehydrogenase alpha chain [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258607812|gb|EEW20420.1| formate dehydrogenase [Listeria monocytogenes FSL R2-503] gi|293595554|gb|EFG03315.1| formate dehydrogenase [Listeria monocytogenes FSL J1-194] gi|300513231|gb|EFK40310.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes FSL N1-017] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|116873952|ref|YP_850733.1| formate dehydrogenase, alpha subunit [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742830|emb|CAK21954.1| formate dehydrogenase, alpha subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLADGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|89900082|ref|YP_522553.1| FAD linked oxidase-like protein [Rhodoferax ferrireducens T118] gi|89344819|gb|ABD69022.1| FAD linked oxidase-like [Rhodoferax ferrireducens T118] Length = 1307 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + D+ L ++L++A+ + +R ED Sbjct: 837 DCLRCGKCKPVCSTHVPRANLLYSPRDKILATSLLVEAFLYEEQTRRGISIRHWQEFEDV 896 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 897 --ADHCTVCHKCLSPCPVNIDFGDVTMNMRNLL 927 >gi|46908757|ref|YP_015146.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|46882029|gb|AAT05323.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|332830208|gb|EGK02836.1| hypothetical protein HMPREF9455_01086 [Dysgonomonas gadei ATCC BAA-286] Length = 428 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 51/179 (28%), Gaps = 25/179 (13%) Query: 83 GICGSCGMNIDGTN------TLACVKDMKDIKGAIAV-YPLPHMSVIKDLVVDMSHFYSQ 135 IC ++ T++ + + + + + P+ H + L V Sbjct: 260 TICAMYDAVVNRHPVISRTITISGEESLNEGNFEVKIGTPVGHFISLFGLSVTNKTVVLG 319 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + + +K R++ C+ C C CP + Sbjct: 320 GPMMGRGITDWNVPVSKGSSGVLFFRKERIKRSNCISCGYCVDVCPMHLMP---MKFEEN 376 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + + + + + C C CP + ++I + K+ L Sbjct: 377 FRRGKYFNL---------------EKYSISSCIECAACEYICPSNVPLIESIKEGKIKL 420 >gi|308094766|ref|ZP_07663043.1| electron transport complex protein RnfC [Vibrio parahaemolyticus AN-5034] gi|308093502|gb|EFO43197.1| electron transport complex protein RnfC [Vibrio parahaemolyticus AN-5034] Length = 772 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C C+ +CP+ L P L Sbjct: 253 SQVPITKTANCILAPTRHEISAHQYEMECIRCGQCAEACPAS-------LLPQQLQWH-- 303 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E D LE L C C CP + + Sbjct: 304 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQ 338 >gi|297626478|ref|YP_003688241.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922243|emb|CBL56815.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 463 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 13/112 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 SP+ + L +CV C C T CP + QA R+ Sbjct: 40 SPRIKNNPNTYEAQQLNRASLDQCVKCTICETQCPVAKATPLFSGPKFVGPQAERF---- 95 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 GE +D L C + CT CP+G+ A+ + ++ + Sbjct: 96 ---RNGESVD-----HTLDYCSSCGICTLDCPQGVRIAEL-NSMARAVMKQG 138 >gi|298529635|ref|ZP_07017038.1| heterodisulfide reductase, C subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511071|gb|EFI34974.1| heterodisulfide reductase, C subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 186 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 13/89 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP ++ + Q R L + + ++ C T Sbjct: 29 CYQCGNCTAGCP------YTFVYDIPVSQIMRLLQAGQ-------KQKILSSRSIWLCAT 75 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +CT CP ++ A + ++ M Sbjct: 76 CESCTTRCPNEIDVATIMDVLRHMARREG 104 >gi|220904814|ref|YP_002480126.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869113|gb|ACL49448.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 938 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 8/121 (6%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ P + D + +C+ C C + CPS D L P Sbjct: 509 KGILNPGVLMNDDPQGHIKHLKPLHPADDLVDKCMECGFCESVCPSR----DLTLTPRQR 564 Query: 197 LQAYRWLIDSRDEFQG----ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + AYR + R+ G ++L+ + C T C CP G++ I ++ Sbjct: 565 ITAYREICRLRETAPGGNELKKLEKQYEYMGKATCATDSLCRPRCPAGVDTGVFIKSLRQ 624 Query: 253 M 253 Sbjct: 625 K 625 >gi|217077952|ref|YP_002335670.1| electron transport complex protein RnfC [Thermosipho africanus TCF52B] gi|217037807|gb|ACJ76329.1| electron transport complex protein RnfC [Thermosipho africanus TCF52B] Length = 438 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 18/91 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C+ C CP L P +L+D + +R D Sbjct: 356 PHEQKSTFCIRCSYCVNVCPM-------GLQP--------YLLDLL--GKKKRYDEAASI 398 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C +CT CP + K I K Sbjct: 399 -GLMDCIECGSCTYICPAKIEHVKTIKLAKK 428 >gi|150402154|ref|YP_001329448.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanococcus maripaludis C7] gi|150033184|gb|ABR65297.1| CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit [Methanococcus maripaludis C7] Length = 778 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 EC C C CP+ R ++D+ L L D + Sbjct: 403 AKECTECGWCVRVCPNN-----------------RPIMDAVTAAAKGDLKKLADLYEYDM 445 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+T C + C + L I K L+ + Sbjct: 446 CYTCGRCEEECERNLPLVSFITKAGDHLVKNQ 477 >gi|147678981|ref|YP_001213196.1| formate dehydrogenase [Pelotomaculum thermopropionicum SI] gi|146275078|dbj|BAF60827.1| hypothetical formate dehydrogenase [Pelotomaculum thermopropionicum SI] Length = 354 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 46/177 (25%), Gaps = 27/177 (15%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPH-------------MSVIKDLV 126 R G C C + I G L + +G + P + +D + Sbjct: 42 SRPGACRICVVEIPGARNLPASCVTEATEGMVVYTASPAVIEARKTNLELLLANHPEDCL 101 Query: 127 VDMSH---FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 + ++ ++ + + +C++C C C Sbjct: 102 TCHKNGECKLQEYAYYYGVSFGAFKGEKHRYPLEDDNPFIVRDMNKCILCGKCVRVC--- 158 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + G + AYR RL + C NC CP G Sbjct: 159 ----EEIQGNNAIDFAYRGFKAKVGPAMDARL----SDTEISNCVFCGNCVAVCPVG 207 >gi|33151623|ref|NP_872976.1| electron transport complex protein RnfC [Haemophilus ducreyi 35000HP] gi|71153698|sp|Q7VNT4|RNFC_HAEDU RecName: Full=Electron transport complex protein rnfC gi|33147844|gb|AAP95365.1| putative iron-sulfur binding NADH dehydrogenase [Haemophilus ducreyi 35000HP] Length = 702 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 27/117 (23%), Gaps = 23/117 (19%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 V+ + H + + C+ C+ CS +CP Y Sbjct: 358 QSPVTKTANCIIAPDHFEYAPPEPERNCIRCSNCSDACPVSLLPQQLYWFARAEDHQKSM 417 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L C C CP + I + KI Sbjct: 418 ------------------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 451 >gi|47094039|ref|ZP_00231769.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes str. 4b H7858] gi|47017589|gb|EAL08392.1| formate dehydrogenase, alpha subunit [Listeria monocytogenes str. 4b H7858] Length = 995 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|323498079|ref|ZP_08103084.1| electron transport complex protein RnfC [Vibrio sinaloensis DSM 21326] gi|323316859|gb|EGA69865.1| electron transport complex protein RnfC [Vibrio sinaloensis DSM 21326] Length = 617 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ C+ C C+ +CP+ ++L Q +W Sbjct: 353 PITKTANCILAPTRKEISPNQYEMACIRCGQCAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + E L+ L C C CP + + + K + RK Sbjct: 402 KAEEFDKCEELN-------LKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTRK 448 >gi|323698374|ref|ZP_08110286.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio sp. ND132] gi|323458306|gb|EGB14171.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio desulfuricans ND132] Length = 938 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 1/107 (0%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + P + + + C C C + CP+ + R Sbjct: 518 NDDPDCNFTGLKQPWGLHEFVDNCNGCGFCDSVCPTREIGFTPRQRIYVKRTIERLRKQG 577 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D + E + + + L C T C CP ++ A + ++ Sbjct: 578 -DTKRAEHWEEMFRQYGLDICATDGLCQLRCPLAVDTASYMRHLRHE 623 >gi|325954442|ref|YP_004238102.1| NAD(P)H-quinone oxidoreductase subunit I [Weeksella virosa DSM 16922] gi|323437060|gb|ADX67524.1| NAD(P)H-quinone oxidoreductase subunit I [Weeksella virosa DSM 16922] Length = 166 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L++ + HF+ + ++I + H + +G C C C+ +C Sbjct: 27 IFKGLMITIKHFFMKKQTINY--PEEKRPFSPVFRGLHILNRDEEGRENCTACGLCALAC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ + YR E + + RC C ++CPK Sbjct: 85 PAEAITMEAAERLPGEEHLYR-----------EEKYAAKYEINMLRCIFCGFCEEACPKD 133 >gi|315426443|dbj|BAJ48081.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Caldiarchaeum subterraneum] Length = 375 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 22/126 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW------------ 202 + E + C+ C C+ CP+ + S + +A RW Sbjct: 249 YNNLESPVYAEVAERCLACGNCTLVCPTCFCTSTDEVTDLSGEKAERWRRWDSCFNADFS 308 Query: 203 ------LIDSRDEFQGE----RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + SR + +L D F + C C CP G++ + AKI Sbjct: 309 YIHGGPIRASRLSRYRQWITHKLSTWVDQFGMLGCVGCGRCITWCPVGIDITEEAAKIMQ 368 Query: 253 MLLDRK 258 ++ Sbjct: 369 RAVEAG 374 >gi|312890388|ref|ZP_07749925.1| NADH dehydrogenase subunit I [Mucilaginibacter paludis DSM 18603] gi|311297158|gb|EFQ74290.1| NADH dehydrogenase subunit I [Mucilaginibacter paludis DSM 18603] Length = 165 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++ L + HF+ + + + ++ H ++ +G C C C+ SC Sbjct: 27 ILSGLRITGKHFFR--KPVTISYPDEKREFSENFRGMHSLKRDEEGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ + YR E+ + + L RC C ++CPK Sbjct: 85 PAEAITMIAAERQKGEEKLYR----------EEKYAAVYEINML-RCIFCGLCEEACPKE 133 >gi|311744817|ref|ZP_07718613.1| oxidoreductase [Aeromicrobium marinum DSM 15272] gi|311311934|gb|EFQ81855.1| oxidoreductase [Aeromicrobium marinum DSM 15272] Length = 956 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 10/134 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + ++V+ + R + L H+D ++ C C Sbjct: 494 PRNLLNPGVLVEPAAVDDDLRGSGRGWDPGRASSRRGLRLLHDDGDFGAAVHRCTGVGKC 553 Query: 177 ST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 CPS+ D + + ++D R G R + L C Sbjct: 554 IADNRATGGVMCPSFQATRDEKHTTRGRARVLQEMVDGRHVTGGWRSPEVH--EALDLCL 611 Query: 229 TIMNCTQSCPKGLN 242 + C CP G++ Sbjct: 612 SCKGCLSDCPTGVD 625 >gi|281355214|ref|ZP_06241708.1| aldo/keto reductase [Victivallis vadensis ATCC BAA-548] gi|281318094|gb|EFB02114.1| aldo/keto reductase [Victivallis vadensis ATCC BAA-548] Length = 374 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L MS ++ L +++ F + +L + + C C Sbjct: 248 LSGMSTLEQLKDNIATFDR---------PDPLTAEQEAVLMKACELFRNHFNVPCTACRY 298 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP D L+ Y + + +R+D L + R C CTQ Sbjct: 299 CCDDCPQQLNIPD-------LMNIYNSYSITPNVAIMQRMDRLRENERPANCIACGACTQ 351 Query: 236 SCPKGLNPAKAIAKIKMMLLDR 257 CP+ ++ +AK+ ++ R Sbjct: 352 HCPQSIDIPGIMAKLAEVMRTR 373 >gi|260437062|ref|ZP_05790878.1| Na(+)-translocating NADH-quinone reductase, A subunit [Butyrivibrio crossotus DSM 2876] gi|292810371|gb|EFF69576.1| Na(+)-translocating NADH-quinone reductase, A subunit [Butyrivibrio crossotus DSM 2876] Length = 439 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 18/101 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D + C+ C C+ +CP + ++ + E Sbjct: 351 LAFIKDDVSHEEPSACIRCGRCAAACPEHLL----------PMKLAALAGQNEPEE---- 396 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C C+ CP +++ +K +++ Sbjct: 397 FKKLGGME----CVECGCCSYVCPAKRQVTQSVRSMKKLII 433 >gi|332098402|gb|EGJ03375.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella dysenteriae 155-74] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|332095091|gb|EGJ00124.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella boydii 3594-74] Length = 768 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 266 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 324 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 325 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 376 >gi|332091187|gb|EGI96276.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Shigella boydii 5216-82] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331667746|ref|ZP_08368610.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA271] gi|331065331|gb|EGI37226.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA271] Length = 1048 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 546 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 604 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 605 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 656 >gi|324113200|gb|EGC07175.1| ferredoxin oxidoreductase [Escherichia fergusonii B253] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|324006191|gb|EGB75410.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 57-2] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|323187582|gb|EFZ72891.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli RN587/1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|323185485|gb|EFZ70846.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 1357] gi|323947683|gb|EGB43686.1| ferredoxin oxidoreductase [Escherichia coli H120] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|323172832|gb|EFZ58464.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli LT-68] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|320636993|gb|EFX06854.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. G5101] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|320195638|gb|EFW70263.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli WV_060327] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|320190150|gb|EFW64801.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC1212] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|312969296|ref|ZP_07783500.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 2362-75] gi|312286080|gb|EFR13996.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 2362-75] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331682842|ref|ZP_08383461.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H299] gi|331080473|gb|EGI51652.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H299] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331672943|ref|ZP_08373721.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA280] gi|331069851|gb|EGI41228.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA280] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331662865|ref|ZP_08363775.1| putative pyruvate-flavodoxin oxidoreductase [Escherichia coli TA143] gi|331058664|gb|EGI30641.1| putative pyruvate-flavodoxin oxidoreductase [Escherichia coli TA143] Length = 593 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 91 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 149 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 150 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 201 >gi|331657402|ref|ZP_08358364.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA206] gi|315297180|gb|EFU56460.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 16-3] gi|331055650|gb|EGI27659.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli TA206] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331652655|ref|ZP_08353666.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli M718] gi|331049761|gb|EGI21827.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli M718] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|331646680|ref|ZP_08347783.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli M605] gi|330911212|gb|EGH39722.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli AA86] gi|331045432|gb|EGI17559.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli M605] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|307309833|ref|ZP_07589483.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Escherichia coli W] gi|306909551|gb|EFN40045.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Escherichia coli W] gi|315060662|gb|ADT74989.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli W] gi|323378772|gb|ADX51040.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Escherichia coli KO11] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|301304965|ref|ZP_07211068.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 124-1] gi|300839795|gb|EFK67555.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 124-1] gi|315253595|gb|EFU33563.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 85-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|300922988|ref|ZP_07139059.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 182-1] gi|301326913|ref|ZP_07220207.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 78-1] gi|300420717|gb|EFK04028.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 182-1] gi|300846465|gb|EFK74225.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 78-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|300916621|ref|ZP_07133341.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 115-1] gi|300416066|gb|EFJ99376.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 115-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|300901793|ref|ZP_07119828.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 84-1] gi|300406005|gb|EFJ89543.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 84-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|301017799|ref|ZP_07182449.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 69-1] gi|300400010|gb|EFJ83548.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 69-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|300948435|ref|ZP_07162536.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 116-1] gi|300954601|ref|ZP_07167046.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 175-1] gi|300318435|gb|EFJ68219.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 175-1] gi|300452049|gb|EFK15669.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 116-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|294788068|ref|ZP_06753312.1| NADH dehydrogenase (ubiquinone), I subunit [Simonsiella muelleri ATCC 29453] gi|294484361|gb|EFG32044.1| NADH dehydrogenase (ubiquinone), I subunit [Simonsiella muelleri ATCC 29453] Length = 159 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V + +F+ + +I + + H R+ +G C+ C C Sbjct: 12 ELVKGMGVTLKNFFVRKDTI--YFPEEKTPQSVRFRGLHAQRRYPNGEERCIACKLCEAV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R D L +C C ++CP Sbjct: 70 CP-----------------AMAINIESEEREDGTRRTTRYDID-LTKCIFCGFCEEACPV 111 Query: 240 G 240 Sbjct: 112 D 112 >gi|293409742|ref|ZP_06653318.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B354] gi|291470210|gb|EFF12694.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B354] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|293414733|ref|ZP_06657382.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B185] gi|291434791|gb|EFF07764.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B185] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|284921282|emb|CBG34348.1| probable pyruvate-flavodoxin oxidoreductase [Escherichia coli 042] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|281178540|dbj|BAI54870.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE15] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|256018399|ref|ZP_05432264.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Shigella sp. D9] gi|332279453|ref|ZP_08391866.1| pyruvate-flavodoxin oxidoreductase [Shigella sp. D9] gi|332101805|gb|EGJ05151.1| pyruvate-flavodoxin oxidoreductase [Shigella sp. D9] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|253773629|ref|YP_003036460.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161451|ref|YP_003044559.1| fused pyruvate-flavodoxin oxidoreductase/hypothetical protein [Escherichia coli B str. REL606] gi|300927862|ref|ZP_07143424.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 187-1] gi|242377149|emb|CAQ31878.1| predicted pyruvate:flavodoxin oxidoreductase [Escherichia coli BL21(DE3)] gi|253324673|gb|ACT29275.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973352|gb|ACT39023.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved hypothetical protein/conserved hypothetical protein/FeS binding protein [Escherichia coli B str. REL606] gi|253977563|gb|ACT43233.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli BL21(DE3)] gi|300464147|gb|EFK27640.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 187-1] gi|323962440|gb|EGB58023.1| ferredoxin oxidoreductase [Escherichia coli H489] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|222033152|emb|CAP75892.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli LF82] gi|312945985|gb|ADR26812.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O83:H1 str. NRG 857C] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|224477286|ref|YP_002634892.1| putative formate dehydrogenase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421893|emb|CAL28707.1| putative formate dehydrogenase [Staphylococcus carnosus subsp. carnosus TM300] Length = 986 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 49/215 (22%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + + P++ S C +C + IDG Sbjct: 1 MQEHLVITLDGKDYLVEPGTNLLAFIKSQETFVPSICYNESLGPIQTCDTCAVEIDGKIE 60 Query: 98 LACVKDMKDIKGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 AC + L + + + H +++ W Sbjct: 61 RACGTTIDRPMVVNTTNSDVKASQKEALDRILEKHILYCTVCDYNNGDCDIHNTMDEWGI 120 Query: 145 TVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K + +C++C C C N + R + Sbjct: 121 EEQSYEYKPKPYEKDFGPFYRYDPNQCILCGRCVEVCQDVQVNETLSIDWEREQP--RVI 178 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D+ C C CP Sbjct: 179 WDNDVSINES------------SCVNCGQCATVCP 201 >gi|218704867|ref|YP_002412386.1| putative 2-oxoacid-flavodoxin [Escherichia coli UMN026] gi|293404876|ref|ZP_06648868.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli FVEC1412] gi|298380520|ref|ZP_06990119.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli FVEC1302] gi|300900106|ref|ZP_07118300.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 198-1] gi|218431964|emb|CAR12849.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli UMN026] gi|291427084|gb|EFF00111.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli FVEC1412] gi|298277962|gb|EFI19476.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli FVEC1302] gi|300356385|gb|EFJ72255.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 198-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|218689337|ref|YP_002397549.1| putative 2-oxoacid-flavodoxin/oxidoreductase [Escherichia coli ED1a] gi|218426901|emb|CAR07759.2| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli ED1a] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|218700067|ref|YP_002407696.1| putative 2-oxoacid-flavodoxin/oxidoreductase [Escherichia coli IAI39] gi|218370053|emb|CAR17829.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli IAI39] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|218553907|ref|YP_002386820.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli IAI1] gi|218360675|emb|CAQ98236.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli IAI1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|218548974|ref|YP_002382765.1| 2-oxoacid-flavodoxin [Escherichia fergusonii ATCC 35469] gi|218356515|emb|CAQ89138.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia fergusonii ATCC 35469] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|218694923|ref|YP_002402590.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli 55989] gi|301019431|ref|ZP_07183605.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 196-1] gi|218351655|emb|CAU97370.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli 55989] gi|299882221|gb|EFI90432.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 196-1] gi|309701648|emb|CBJ00955.1| probable pyruvate-flavodoxin oxidoreductase [Escherichia coli ETEC H10407] gi|323937532|gb|EGB33801.1| ferredoxin oxidoreductase [Escherichia coli E1520] gi|323942228|gb|EGB38400.1| ferredoxin oxidoreductase [Escherichia coli E482] gi|332343046|gb|AEE56380.1| pyruvate:ferredoxin oxidoreductase NifJ [Escherichia coli UMNK88] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|215486641|ref|YP_002329072.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O127:H6 str. E2348/69] gi|215264713|emb|CAS09087.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O127:H6 str. E2348/69] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|209918652|ref|YP_002292736.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE11] gi|300820091|ref|ZP_07100265.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 107-1] gi|209911911|dbj|BAG76985.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE11] gi|300527348|gb|EFK48410.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 107-1] gi|324021229|gb|EGB90448.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 117-3] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|254457778|ref|ZP_05071206.1| NADH-quinone oxidoreductase, g subunit [Campylobacterales bacterium GD 1] gi|207086570|gb|EDZ63854.1| NADH-quinone oxidoreductase, g subunit [Campylobacterales bacterium GD 1] Length = 682 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 23/212 (10%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKD-- 106 D++ + + P + R S C C + DG AC KD Sbjct: 12 DVETQEGEFILNAARANDIFIPAICYLTRCSPTLA-CRICLVEADGKQVYACNAKSKDGM 70 Query: 107 --IKGAIAVYPLP---------HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + + + + Q+ ++E + + S Sbjct: 71 NITTKTENIEKERRAIMEVYDVNHPLQCGVCDQSGECELQNYTLEMGVDSQSYTVKDVNR 130 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 SH+ C++C C+T+C ++ P ++ + Sbjct: 131 SSHDWGHLHYDPGLCIVCERCATACKDMIGDNSLKTIPRGADALDEEFKNTMPKDAYAMW 190 Query: 216 DNLE-------DPFRLYRCHTIMNCTQSCPKG 240 + L + + C + C CP G Sbjct: 191 NKLNKSVIGLTNGTDVLDCTSCGECAAVCPVG 222 >gi|182626452|ref|ZP_02954204.1| polyA polymerase family protein [Clostridium perfringens D str. JGS1721] gi|177908249|gb|EDT70807.1| polyA polymerase family protein [Clostridium perfringens D str. JGS1721] Length = 436 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKLDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|168749008|ref|ZP_02774030.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4113] gi|168756033|ref|ZP_02781040.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4401] gi|168769434|ref|ZP_02794441.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4486] gi|168775177|ref|ZP_02800184.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4196] gi|168782882|ref|ZP_02807889.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4076] gi|168788322|ref|ZP_02813329.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC869] gi|168799662|ref|ZP_02824669.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC508] gi|195938015|ref|ZP_03083397.1| putative oxidoreductase [Escherichia coli O157:H7 str. EC4024] gi|208811159|ref|ZP_03252992.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4206] gi|208816429|ref|ZP_03257608.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4045] gi|208819161|ref|ZP_03259481.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4042] gi|209400785|ref|YP_002270406.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4115] gi|254792941|ref|YP_003077778.1| fused putative pyruvate-flavodoxin oxidoreductase: conserved protein, conserved protein, FeS binding protein [Escherichia coli O157:H7 str. TW14359] gi|261224340|ref|ZP_05938621.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein, conserved protein, FeS binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257406|ref|ZP_05949939.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein, conserved protein, FeS binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291282497|ref|YP_003499315.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O55:H7 str. CB9615] gi|187769350|gb|EDU33194.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4196] gi|188016608|gb|EDU54730.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4113] gi|188999722|gb|EDU68708.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4076] gi|189356860|gb|EDU75279.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4401] gi|189361511|gb|EDU79930.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4486] gi|189371814|gb|EDU90230.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC869] gi|189377951|gb|EDU96367.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC508] gi|208724665|gb|EDZ74373.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4206] gi|208733077|gb|EDZ81765.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4045] gi|208739284|gb|EDZ86966.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4042] gi|209162185|gb|ACI39618.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4115] gi|209771308|gb|ACI83966.1| putative oxidoreductase [Escherichia coli] gi|209771312|gb|ACI83968.1| putative oxidoreductase [Escherichia coli] gi|209771314|gb|ACI83969.1| putative oxidoreductase [Escherichia coli] gi|209771316|gb|ACI83970.1| putative oxidoreductase [Escherichia coli] gi|254592341|gb|ACT71702.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein, conserved protein, FeS binding protein [Escherichia coli O157:H7 str. TW14359] gi|290762370|gb|ADD56331.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O55:H7 str. CB9615] gi|320642360|gb|EFX11646.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H- str. 493-89] gi|320647716|gb|EFX16461.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H- str. H 2687] gi|320653323|gb|EFX21460.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658992|gb|EFX26615.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O55:H7 str. USDA 5905] gi|320663824|gb|EFX31052.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. LSU-61] gi|326340985|gb|EGD64778.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. 1125] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|170683269|ref|YP_001743829.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli SMS-3-5] gi|170520987|gb|ACB19165.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli SMS-3-5] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|110799068|ref|YP_696102.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens ATCC 13124] gi|110673715|gb|ABG82702.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens ATCC 13124] Length = 436 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKLDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|91210642|ref|YP_540628.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli UTI89] gi|117623652|ref|YP_852565.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli APEC O1] gi|218558334|ref|YP_002391247.1| 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli S88] gi|237705378|ref|ZP_04535859.1| pyruvate-flavodoxin oxidoreductase [Escherichia sp. 3_2_53FAA] gi|91072216|gb|ABE07097.1| probable pyruvate-flavodoxin oxidoreductase [Escherichia coli UTI89] gi|115512776|gb|ABJ00851.1| probable pyruvate-flavodoxin oxidoreductase [Escherichia coli APEC O1] gi|218365103|emb|CAR02812.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli S88] gi|226900135|gb|EEH86394.1| pyruvate-flavodoxin oxidoreductase [Escherichia sp. 3_2_53FAA] gi|294490178|gb|ADE88934.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli IHE3034] gi|307627077|gb|ADN71381.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli UM146] gi|315289083|gb|EFU48481.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 110-3] gi|323949049|gb|EGB44941.1| ferredoxin oxidoreductase [Escherichia coli H252] gi|323956909|gb|EGB52641.1| ferredoxin oxidoreductase [Escherichia coli H263] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|82776743|ref|YP_403092.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|309788912|ref|ZP_07683507.1| pyruvate:ferredoxin oxidoreductase [Shigella dysenteriae 1617] gi|81240891|gb|ABB61601.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|308923183|gb|EFP68695.1| pyruvate:ferredoxin oxidoreductase [Shigella dysenteriae 1617] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|82544174|ref|YP_408121.1| oxidoreductase, Fe-S subunit [Shigella boydii Sb227] gi|81245585|gb|ABB66293.1| putative oxidoreductase, Fe-S subunit [Shigella boydii Sb227] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|74312250|ref|YP_310669.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|73855727|gb|AAZ88434.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|323169667|gb|EFZ55334.1| pyruvate:ferredoxin oxidoreductase [Shigella sonnei 53G] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|15605895|ref|NP_213272.1| hypothetical protein aq_391 [Aquifex aeolicus VF5] gi|2983070|gb|AAC06677.1| putative protein [Aquifex aeolicus VF5] Length = 250 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 11/97 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + L+ C+ C C+ SCPS + P ++Q R+L E + L ++ Sbjct: 38 DFRFKEYLFGCLNCGVCTASCPSNRFFD---YSPREIVQ--RFL-----ENDIDVLYDMM 87 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + ++ C C CP NP + ++ + + Sbjct: 88 HEY-IWACSQCFTCWIRCPFVNNPGGLVIIMREVAVR 123 >gi|15801750|ref|NP_287768.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|12515322|gb|AAG56382.1|AE005366_8 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|26247685|ref|NP_753725.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli CFT073] gi|227886213|ref|ZP_04004018.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 83972] gi|300971597|ref|ZP_07171508.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 45-1] gi|301046199|ref|ZP_07193372.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 185-1] gi|306813626|ref|ZP_07447807.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli NC101] gi|26108087|gb|AAN80287.1|AE016760_146 Probable pyruvate-flavodoxin oxidoreductase [Escherichia coli CFT073] gi|227836417|gb|EEJ46883.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 83972] gi|300301808|gb|EFJ58193.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 185-1] gi|300411211|gb|EFJ94749.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 45-1] gi|305852900|gb|EFM53345.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli NC101] gi|307553411|gb|ADN46186.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli ABU 83972] gi|315295387|gb|EFU54717.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 153-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|16129339|ref|NP_415896.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli str. K-12 substr. MG1655] gi|89108224|ref|AP_002004.1| fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase [Escherichia coli str. K-12 substr. W3110] gi|170081055|ref|YP_001730375.1| fused pyruvate-flavodoxin oxidoreductase: protein; protein; FeS binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238900607|ref|YP_002926403.1| fused putative pyruvate-flavodoxin oxidoreductase: hypothetical protein [Escherichia coli BW2952] gi|2506913|sp|P52647|NIFJ_ECOLI RecName: Full=Probable pyruvate-flavodoxin oxidoreductase gi|1742250|dbj|BAA14982.1| fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase [Escherichia coli str. K12 substr. W3110] gi|1787642|gb|AAC74460.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli str. K-12 substr. MG1655] gi|169888890|gb|ACB02597.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein; conserved protein; FeS binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238861238|gb|ACR63236.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli BW2952] gi|260449493|gb|ACX39915.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Escherichia coli DH1] gi|315136019|dbj|BAJ43178.1| fused putative pyruvate-flavodoxinoxidoreductase: hypothetical protein [Escherichia coli DH1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|15831254|ref|NP_310027.1| oxidoreductase [Escherichia coli O157:H7 str. Sakai] gi|168763116|ref|ZP_02788123.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4501] gi|217329277|ref|ZP_03445357.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. TW14588] gi|13361465|dbj|BAB35423.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai] gi|189366638|gb|EDU85054.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. EC4501] gi|209771310|gb|ACI83967.1| putative oxidoreductase [Escherichia coli] gi|217317716|gb|EEC26144.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. TW14588] gi|326340735|gb|EGD64532.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli O157:H7 str. 1044] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|194431874|ref|ZP_03064164.1| pyruvate-flavodoxin oxidoreductase [Shigella dysenteriae 1012] gi|194419782|gb|EDX35861.1| pyruvate-flavodoxin oxidoreductase [Shigella dysenteriae 1012] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|84502452|ref|ZP_01000588.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Oceanicola batsensis HTCC2597] gi|84389264|gb|EAQ02061.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Oceanicola batsensis HTCC2597] Length = 527 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 22/106 (20%), Gaps = 27/106 (25%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP + + RW + R + +R + Sbjct: 201 FIFGGFMREQVCIYMCPWPRIQGAMMDPGTLTVGYRRWRGEPRGKGGVKRAQAAAEAIGS 260 Query: 224 --------------------------LYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 261 GEAVARYGAALDKDSAAPRTARDGGVLGDCIDCNACVAVCPMGIDI 306 >gi|194436630|ref|ZP_03068731.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 101-1] gi|194424662|gb|EDX40648.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 101-1] gi|323973602|gb|EGB68784.1| ferredoxin oxidoreductase [Escherichia coli TA007] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|191165148|ref|ZP_03026992.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli B7A] gi|293433767|ref|ZP_06662195.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B088] gi|309797096|ref|ZP_07691494.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 145-7] gi|190904920|gb|EDV64625.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli B7A] gi|291324586|gb|EFE64008.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli B088] gi|308119266|gb|EFO56528.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 145-7] gi|320199388|gb|EFW73979.1| Pyruvate-flavodoxin oxidoreductase [Escherichia coli EC4100B] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|188491773|ref|ZP_02999043.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 53638] gi|188486972|gb|EDU62075.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 53638] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|110641583|ref|YP_669313.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli 536] gi|191171078|ref|ZP_03032629.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli F11] gi|300972120|ref|ZP_07171832.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 200-1] gi|110343175|gb|ABG69412.1| probable pyruvate-flavodoxin oxidoreductase [Escherichia coli 536] gi|190908810|gb|EDV68398.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli F11] gi|300309214|gb|EFJ63734.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 200-1] gi|324011369|gb|EGB80588.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 60-1] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|157160859|ref|YP_001458177.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli HS] gi|170020287|ref|YP_001725241.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Escherichia coli ATCC 8739] gi|312971545|ref|ZP_07785720.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 1827-70] gi|157066539|gb|ABV05794.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli HS] gi|169755215|gb|ACA77914.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Escherichia coli ATCC 8739] gi|310336142|gb|EFQ01342.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 1827-70] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|157155711|ref|YP_001462656.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E24377A] gi|193062584|ref|ZP_03043678.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E22] gi|193067006|ref|ZP_03047975.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E110019] gi|260843695|ref|YP_003221473.1| fused putative pyruvate-flavodoxin oxidoreductase: hypothetical protein/hypothetical protein/FeS binding protein [Escherichia coli O103:H2 str. 12009] gi|300825298|ref|ZP_07105380.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 119-7] gi|331677225|ref|ZP_08377907.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H591] gi|157077741|gb|ABV17449.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E24377A] gi|192931706|gb|EDV84306.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E22] gi|192959596|gb|EDV90030.1| pyruvate-flavodoxin oxidoreductase [Escherichia coli E110019] gi|257758842|dbj|BAI30339.1| fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein [Escherichia coli O103:H2 str. 12009] gi|300522225|gb|EFK43294.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 119-7] gi|323162440|gb|EFZ48292.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli E128010] gi|324117639|gb|EGC11544.1| ferredoxin oxidoreductase [Escherichia coli E1167] gi|331075076|gb|EGI46389.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H591] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|187733332|ref|YP_001880205.1| pyruvate-flavodoxin oxidoreductase [Shigella boydii CDC 3083-94] gi|187430324|gb|ACD09598.1| pyruvate-flavodoxin oxidoreductase [Shigella boydii CDC 3083-94] Length = 1174 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|327401563|ref|YP_004342402.1| heterodisulfide reductase subunit D [Archaeoglobus veneficus SNP6] gi|327317071|gb|AEA47687.1| heterodisulfide reductase, subunit D, putative [Archaeoglobus veneficus SNP6] Length = 535 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 43/144 (29%), Gaps = 16/144 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L + + + + K + R + CV C C+ C Y Sbjct: 46 LGIPYRDWDPLDKDWKLPPDWKETFLNKFKELLDKYRSLKVFMDICVRCGACADKCHYYV 105 Query: 185 WNSDRYLGPAILLQAYRWLID--------------SRDEFQGERLDNLEDPFRLYRCHTI 230 D P + R + E + + L + Y+C Sbjct: 106 GTGDPKNMPVARAETLRSIYRRYFTKIGQIFGEWAGARELTEDVIKELY--YYFYQCSLC 163 Query: 231 MNCTQSCPKGLNPAKAIAKIKMML 254 C+ CP G++ A+ + + + +L Sbjct: 164 RRCSAFCPYGIDTAEIVWRGRELL 187 >gi|256833330|ref|YP_003162057.1| D-lactate dehydrogenase (cytochrome) [Jonesia denitrificans DSM 20603] gi|256686861|gb|ACV09754.1| D-lactate dehydrogenase (cytochrome) [Jonesia denitrificans DSM 20603] Length = 973 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 11/94 (11%) Query: 158 HEDRQKIDGLYECVMCACCST---------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 H+D ++ CV C CPSY D + + + + Sbjct: 540 HDDGDMSTAVHRCVGVGKCRADNMSTGAGFMCPSYQATKDEKDSTRGRARVLQEMANGTL 599 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + L C + C+ CP G++ Sbjct: 600 VTGGWRSPEVH--EALDLCLSCKACSSDCPAGVD 631 >gi|212218221|ref|YP_002305008.1| NADH dehydrogenase subunit I [Coxiella burnetii CbuK_Q154] gi|212012483|gb|ACJ19863.1| NADH-quinone oxidoreductase chain I [Coxiella burnetii CbuK_Q154] Length = 168 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + +FY + + + R+ +G C+ C C Sbjct: 20 ELLKGLSLTLRYFYR--KKVTIHYPDEEVPSSFRFRGMLALRRYPNGEERCIACKLCEAF 77 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP E G R L D ++C C ++CP Sbjct: 78 CPACAITIEA--GPR--------------EADGSRRTTLYDIDA-FKCINCGFCEEACPV 120 Query: 240 G 240 Sbjct: 121 D 121 >gi|134096019|ref|YP_001101094.1| putative fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase [Herminiimonas arsenicoxydans] gi|133739922|emb|CAL62973.1| Conserved hypothetical protein, putative oxidoreductase [Herminiimonas arsenicoxydans] Length = 1332 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 15/213 (7%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +I + L RS I G G+ I L + Sbjct: 748 NIPVNSDHYQMLQDAHAAVARI---MKLARSLNGVISGEHGIGITKLEFLTSEELADFRS 804 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 + P H K ++DMS + R+ + + + QS + + Sbjct: 805 YKKRIDPDGHF--NKGKLMDMSELSADLRNAYTPSFGLMGHESLIMQQSDIGA-IANSVK 861 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 862 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 921 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 922 --ADHCTVCHKCLTPCPVDIDFGDVSMNMRNLL 952 >gi|33598516|ref|NP_886159.1| iron-sulfur binding oxidase [Bordetella parapertussis 12822] gi|33574645|emb|CAE39297.1| probable iron-sulfur binding oxidase [Bordetella parapertussis] Length = 1320 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 854 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISLKHWEEFEDV 913 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 914 --ADYCTVCHKCYTPCPVDIDFGDVSMNMRALL 944 >gi|328950039|ref|YP_004367374.1| NAD(P)H-quinone oxidoreductase subunit I [Marinithermus hydrothermalis DSM 14884] gi|328450363|gb|AEB11264.1| NAD(P)H-quinone oxidoreductase subunit I [Marinithermus hydrothermalis DSM 14884] Length = 176 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 16/119 (13%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 K L + + H +S + + H + +GL +C+ C+ C+ CP+ Sbjct: 8 KSLGITLKHLFS--KPVTIPYPDAPVPLKPRYKGRHVLTRHPNGLEKCIGCSLCAAVCPA 65 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 Y + D GER + + L RC C ++CP G Sbjct: 66 YAIYVEAA------------ENDPENPVSAGERYAKVYEINML-RCIFCGLCEEACPTG 111 >gi|332520298|ref|ZP_08396760.1| D-lactate dehydrogenase (cytochrome) [Lacinutrix algicola 5H-3-7-4] gi|332043651|gb|EGI79846.1| D-lactate dehydrogenase (cytochrome) [Lacinutrix algicola 5H-3-7-4] Length = 970 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + K LL + + +C C T CPSY + Sbjct: 532 RYEVDRKEPEVKTLLDFSSSQGILREAEKCNGSGDCRKTERFGGTMCPSYRATKNEKDST 591 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + ++ L+D F L C + C CP ++ A Sbjct: 592 RARANALREYLTHSEKNNKFNHKELKDVFSL--CLSCKACKTECPSSVDVATL 642 >gi|320353815|ref|YP_004195154.1| FAD linked oxidase domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122317|gb|ADW17863.1| FAD linked oxidase domain protein [Desulfobulbus propionicus DSM 2032] Length = 1213 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGE--RLDNLEDP 221 + +CV C C C ++ S + P A LI++ D + R + L++ Sbjct: 769 KISKCVRCGKCKADCCVFYPGSSLFFHPRNKNLAIGSLIEALLYDMQRAHFPRFNQLKNL 828 Query: 222 FRL-YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + CP ++ A+ + +L +R Sbjct: 829 EEIADHCTLCGKCFKPCPVDIDTAQVSILERQILGERG 866 >gi|292491629|ref|YP_003527068.1| (NiFe) hydrogenase subunit beta [Nitrosococcus halophilus Nc4] gi|291580224|gb|ADE14681.1| (NiFe) hydrogenase, beta subunit, putative [Nitrosococcus halophilus Nc4] Length = 398 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 33/117 (28%), Gaps = 22/117 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSY--WWNSDRYLGPAILLQAYR-------------WL 203 E + D C+ CA C CP+ D Q R Sbjct: 275 EHPRWDDVASRCLSCANCVMVCPTCFCHREYDEMSLEGNHSQHKRQWDACFTLEHGSVHG 334 Query: 204 IDSRDEFQGERLDNL-------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + + L + F + C C CP G++ + +A I+ Sbjct: 335 GHLRPQIKQRYRQWLTHKLGSWIEQFGVSGCVGCGRCITWCPTGIDLTEEVAAIRNQ 391 >gi|237752486|ref|ZP_04582966.1| NADH dehydrogenase subunit G [Helicobacter winghamensis ATCC BAA-430] gi|229375975|gb|EEO26066.1| NADH dehydrogenase subunit G [Helicobacter winghamensis ATCC BAA-430] Length = 823 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 46/200 (23%), Gaps = 42/200 (21%) Query: 72 PTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMK---------DIKGAIAVYPLPHMSV 121 P + C C + DG AC +K V + V Sbjct: 33 PAICYLSCASPTLACKMCMVEADGKRVYACNAKVKDGMQIVVHTPEIEEERVAIMQAYDV 92 Query: 122 IKDLVVDM-----SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 L + + + + D C++C C Sbjct: 93 NHPLQCGVCDKSGECELQNYTHYVGVSEQKYALKDTCKPFGKWGKAVYDP-NLCIVCERC 151 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY----------- 225 T C ++A ++ + D+ E + D + ++ Sbjct: 152 VTLCKDKI--------GKSHIKALKYDGEMPDKAYKESMPK--DAYGVWTKFKKSLIGLN 201 Query: 226 -----RCHTIMNCTQSCPKG 240 C C CP G Sbjct: 202 NVEADACGDCGECVSVCPVG 221 >gi|221640149|ref|YP_002526411.1| protein rdxB [Rhodobacter sphaeroides KD131] gi|221160930|gb|ACM01910.1| Protein rdxB [Rhodobacter sphaeroides KD131] Length = 477 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 25/116 (21%), Gaps = 4/116 (3%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + C +CP + Sbjct: 169 WVFYFTDAPTLLVDLLTGNAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAM 228 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 I + W + R + + + L C M C CP G++ Sbjct: 229 MDEETITVAYREWRGEPRGKLKKG--EPLSPDQG--DCIDCMACVNVCPMGIDIRD 280 >gi|126698731|ref|YP_001087628.1| electron transport complex protein [Clostridium difficile 630] gi|254974671|ref|ZP_05271143.1| electron transport complex protein [Clostridium difficile QCD-66c26] gi|255092059|ref|ZP_05321537.1| electron transport complex protein [Clostridium difficile CIP 107932] gi|255100151|ref|ZP_05329128.1| electron transport complex protein [Clostridium difficile QCD-63q42] gi|255306041|ref|ZP_05350213.1| electron transport complex protein [Clostridium difficile ATCC 43255] gi|255313796|ref|ZP_05355379.1| electron transport complex protein [Clostridium difficile QCD-76w55] gi|255516477|ref|ZP_05384153.1| electron transport complex protein [Clostridium difficile QCD-97b34] gi|255649577|ref|ZP_05396479.1| electron transport complex protein [Clostridium difficile QCD-37x79] gi|260682741|ref|YP_003214026.1| electron transport complex protein [Clostridium difficile CD196] gi|260686339|ref|YP_003217472.1| electron transport complex protein [Clostridium difficile R20291] gi|306519703|ref|ZP_07406050.1| electron transport complex protein [Clostridium difficile QCD-32g58] gi|115250168|emb|CAJ67989.1| Electron transport complex protein [Clostridium difficile] gi|260208904|emb|CBA61888.1| electron transport complex protein [Clostridium difficile CD196] gi|260212355|emb|CBE03164.1| electron transport complex protein [Clostridium difficile R20291] Length = 445 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 19/125 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + K + +L E+ + + C+ C C+ CPS +L P Sbjct: 333 MMGIAQYTTEIATNKGSSGILCLDEEESRTPDIQNCLRCGRCTDVCPS-------FLQP- 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + AY +D++ D C +C+ CP ++I K + Sbjct: 385 LFISAYSL----KDDYDTAEYHRAMD------CIECGSCSFICPARRPLLQSIRSAKREI 434 Query: 255 -LDRK 258 R+ Sbjct: 435 GAKRR 439 >gi|328478953|gb|EGF48462.1| iron-sulfur cluster binding protein [Lactobacillus rhamnosus MTCC 5462] Length = 261 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C CP Y G L D + E+ +L L Sbjct: 70 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLSPVLDGY--EKFGDLPFASSL---- 123 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT++CP + + K + +++D+ Sbjct: 124 -CAACTETCPVRIPLHHLLIKHREVMMDK 151 >gi|302341926|ref|YP_003806455.1| molybdopterin oxidoreductase [Desulfarculus baarsii DSM 2075] gi|301638539|gb|ADK83861.1| molybdopterin oxidoreductase [Desulfarculus baarsii DSM 2075] Length = 778 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 28/107 (26%), Gaps = 13/107 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + P L + +CVMC C +C N Sbjct: 110 QRLAYAHGVKNAPVANPLATRLVDDSQAFIVRDFKKCVMCGRCVAACNEIQVN------M 163 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 AI L R +D+ RC C Q+CP G Sbjct: 164 AIPLPFGRREDRPLPAGWLPLVDH-------DRCTQCGECVQACPVG 203 >gi|289424016|ref|ZP_06425805.1| electron transport complex protein RnfC [Peptostreptococcus anaerobius 653-L] gi|289155591|gb|EFD04267.1| electron transport complex protein RnfC [Peptostreptococcus anaerobius 653-L] Length = 447 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 19/125 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K + +L E+ C+ C C+ CP++ + L + Sbjct: 333 MMGLAQYTSDISTNKGSSGILILPEEMAVAPEQMNCIKCGRCTDVCPAFL----QPLFIS 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + DE + R D C +C+ CP +I + K + Sbjct: 389 AYSLKNNF-----DEAEKHR---AMD------CIECGSCSYICPARRLLLPSIRQAKREI 434 Query: 255 -LDRK 258 R+ Sbjct: 435 GAKRR 439 >gi|229543244|ref|ZP_04432304.1| formate dehydrogenase, alpha subunit [Bacillus coagulans 36D1] gi|229327664|gb|EEN93339.1| formate dehydrogenase, alpha subunit [Bacillus coagulans 36D1] Length = 997 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 46/175 (26%), Gaps = 31/175 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLV 126 C +C +N++G AC +KD + L + + + Sbjct: 44 GSIQTCDTCFVNVNGNLVRACATKVEPGMEVESGSKPVKDAQYEAMSRILKNHELYCTVC 103 Query: 127 VDMSHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + + H + E AK +C++C C +C Sbjct: 104 DNNNGNCVVHNTAEHLEIEHQKYQFEAKPYPPDQSHPFYRYEPDQCILCGRCVEACQDLQ 163 Query: 185 WNSDRYLGPAILLQAYRWLID-SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + + W D DE C + +C CP Sbjct: 164 VNETLTIDWDREVPRVIWDNDVPIDES---------------SCVSCGHCVTVCP 203 >gi|167968954|ref|ZP_02551231.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis H37Ra] Length = 86 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Query: 27 LKEYRIYRWNPDNKGN----PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR 81 + +I R+NPD+ ++ V +L+ L+YIK +D TLT RRSC Sbjct: 23 MVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSD-RLLNLLIYIKGYLDGTLTFRRSCA 80 >gi|167754636|ref|ZP_02426763.1| hypothetical protein CLORAM_00138 [Clostridium ramosum DSM 1402] gi|167705468|gb|EDS20047.1| hypothetical protein CLORAM_00138 [Clostridium ramosum DSM 1402] Length = 372 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 12/140 (8%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V LP++ V+ + + + + + + A +Q D K C Sbjct: 238 VASLPNVKVVLSGMSTYEQVLDNLATFKNFEYLKAEEVAL--IQDVRDTLKARTQNGCTG 295 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C CP + + ++ DS D+F+ + L+ + + C Sbjct: 296 CAYCMP-CPFGVDIPNNF-----KYWNNAFVYDSHDQFKAK-LEKMVSEAKAENCKQCGA 348 Query: 233 CTQSCPKGLNPAKAIAKIKM 252 C + CP+ L + +K Sbjct: 349 CEKMCPQQLPIRE---DLKR 365 >gi|77464265|ref|YP_353769.1| iron-sulfur cluster-binding protein [Rhodobacter sphaeroides 2.4.1] gi|34978395|sp|P54932|RDXB_RHOS4 RecName: Full=Protein rdxB gi|7271787|gb|AAF44623.1|AF202779_1 RdxB [Rhodobacter sphaeroides] gi|77388683|gb|ABA79868.1| iron-sulfur cluster-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 477 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 25/116 (21%), Gaps = 4/116 (3%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + C +CP + Sbjct: 169 WVFYFTDAPTLLVDLLTGNAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAM 228 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 I + W + R + + + L C M C CP G++ Sbjct: 229 MDEETITVAYREWRGEPRGKLKKG--EPLSPDQG--DCIDCMACVNVCPMGIDIRD 280 >gi|257790463|ref|YP_003181069.1| electron transport complex, RnfABCDGE type, C subunit [Eggerthella lenta DSM 2243] gi|317490037|ref|ZP_07948528.1| electron transport complex [Eggerthella sp. 1_3_56FAA] gi|257474360|gb|ACV54680.1| electron transport complex, RnfABCDGE type, C subunit [Eggerthella lenta DSM 2243] gi|316910878|gb|EFV32496.1| electron transport complex [Eggerthella sp. 1_3_56FAA] Length = 442 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 22/108 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D + C+ C C+ SCP L P + +AY + Sbjct: 353 LVFSKDAMEQPATTACIRCGRCTNSCPMQ-------LSPIAIKKAY----------TVQD 395 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG--LNPAKAIAK--IKMMLLDRK 258 L+D C C+ CP L +A+ ++ + R Sbjct: 396 AKKLDDLMA-DLCMGCGTCSFVCPAKQPLAQTSKLARDFMRAEMARRG 442 >gi|197303563|ref|ZP_03168602.1| hypothetical protein RUMLAC_02285 [Ruminococcus lactaris ATCC 29176] gi|197297561|gb|EDY32122.1| hypothetical protein RUMLAC_02285 [Ruminococcus lactaris ATCC 29176] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 36/108 (33%), Gaps = 25/108 (23%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ED K C+ CA C CPS R + SR +R Sbjct: 351 LAFKEDIVKKSPETACINCARCVDVCPS------------------RIIP-SRLADFAKR 391 Query: 215 LDNLEDPFRLYR---CHTIMNCTQSCPKGLNPAKAIAKIKM-MLLDRK 258 D F + C +C+ CP ++I ++ L +RK Sbjct: 392 QDEA--SFVAWNGLECVECGSCSYVCPAKRQLKQSIGSMRKITLANRK 437 >gi|168216797|ref|ZP_02642422.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens NCTC 8239] gi|182381000|gb|EDT78479.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens NCTC 8239] Length = 436 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKLDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|167630075|ref|YP_001680574.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167592815|gb|ABZ84563.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 190 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 13/92 (14%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C CS CP+ + ++QA + D+ + ++ C Sbjct: 29 SLCYQCGKCSAGCPAAFAMEHTVRQIIRMVQA-GLIQDALRT------------YSIWAC 75 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C+ CP+ ++PAK + +++ + + Sbjct: 76 AGCETCSSRCPRQVDPAKVMEALRIEAKKQGL 107 >gi|332559154|ref|ZP_08413476.1| iron-sulfur cluster-binding protein [Rhodobacter sphaeroides WS8N] gi|332276866|gb|EGJ22181.1| iron-sulfur cluster-binding protein [Rhodobacter sphaeroides WS8N] Length = 477 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 25/116 (21%), Gaps = 4/116 (3%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + C +CP + Sbjct: 169 WVFYFTDAPTLLVDLLTGNAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAM 228 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 I + W + R + + + L C M C CP G++ Sbjct: 229 MDEETITVAYREWRGEPRGKLKKG--EPLSPDQG--DCIDCMACVNVCPMGIDIRD 280 >gi|300727611|ref|ZP_07061000.1| electron transport complex protein RnfC [Prevotella bryantii B14] gi|299775131|gb|EFI71734.1| electron transport complex protein RnfC [Prevotella bryantii B14] Length = 472 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C +CP + YL + + D LE Sbjct: 367 HRKEAQACIRCGKCVEACP---MGLEPYLLATLSVNKM--------------FDQLEQEE 409 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C + +C +CP IA K ++ Sbjct: 410 VV-SCISCGSCQFTCPAHRPLLDNIANGKGAVM 441 >gi|295134576|ref|YP_003585252.1| FAD-linked oxidase-like protein [Zunongwangia profunda SM-A87] gi|294982591|gb|ADF53056.1| FAD-linked oxidase-like protein [Zunongwangia profunda SM-A87] Length = 975 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 9/111 (8%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + K L+ E++ + +C C T CPSY D Sbjct: 534 RYQPDRIEPEIKTLMNFDENQGILRLAEQCNGSGDCRKSADSGGTMCPSYRATKDEKDTT 593 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R + + D+ +++ + L C + C CP ++ A Sbjct: 594 RARANTLREFLTNSDKENKFSHQEIKEAYDL--CLSCKGCKSECPSSVDVA 642 >gi|189425037|ref|YP_001952214.1| rhodanese-like domain/cysteine-rich domain protein [Geobacter lovleyi SZ] gi|189421296|gb|ACD95694.1| rhodanese-like domain/cysteine-rich domain protein [Geobacter lovleyi SZ] Length = 347 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 22/97 (22%), Gaps = 19/97 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 D C C C C L Sbjct: 1 MADMAANCTSCGECVRPCSFLQHQGTPLTIAQQGATDRNLLA------------------ 42 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP+GL+P+ + ++ R + Sbjct: 43 -AYGCSLCGLCDAVCPEGLSPSDMLLGMRQEAATRGL 78 >gi|91228908|ref|ZP_01262808.1| electron transport complex protein RnfC [Vibrio alginolyticus 12G01] gi|91187539|gb|EAS73871.1| electron transport complex protein RnfC [Vibrio alginolyticus 12G01] Length = 878 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 18/116 (15%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C+ C+ +CP+ L P L Sbjct: 350 SQVPITKTANCILAPTRREISPHQYEMECIRCSQCAEACPAS-------LLPQQLQWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E D LE L C C CP + + + K + R Sbjct: 401 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTR 447 >gi|325279917|ref|YP_004252459.1| D-lactate dehydrogenase (cytochrome) [Odoribacter splanchnicus DSM 20712] gi|324311726|gb|ADY32279.1| D-lactate dehydrogenase (cytochrome) [Odoribacter splanchnicus DSM 20712] Length = 934 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + + + + C+ C C CPS + L P Sbjct: 502 KGVILNEDPDAHLHSIKKMTLFAGELNYKKADTCIECGFCEHVCPSRYVT----LTPRQR 557 Query: 197 LQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAI 247 LQA R + E G R L+ D C C CP G++ AI Sbjct: 558 LQARRII-----ERTGSRELEKEYDYIGEQTCAADGMCQVPCPMGISTAVVTDAI 607 >gi|320095473|ref|ZP_08027147.1| D-lactate dehydrogenase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977594|gb|EFW09263.1| D-lactate dehydrogenase [Actinomyces sp. oral taxon 178 str. F0338] Length = 383 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 19/100 (19%) Query: 168 YECVMCACCST------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C C CPSY D + +D GE + +++ P Sbjct: 201 HRCTGVGKCRAGAPGAFMCPSYKATGDEKDVTRGRARIL------QDAANGELVASIDSP 254 Query: 222 ---FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C C+ CP G++ +AK + R+ Sbjct: 255 DVLEALDLCLACKACSADCPAGVD----MAKYRSEAFFRR 290 >gi|168699975|ref|ZP_02732252.1| FAD linked oxidase domain protein [Gemmata obscuriglobus UQM 2246] Length = 966 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 27/87 (31%), Gaps = 14/87 (16%) Query: 170 CVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLI-----DSRDEFQGERLDNLE 219 C C CPSY D A R + SR G+R + Sbjct: 558 CNGAGVCRKTQGGAMCPSYRATKDEQDTTRARANALRLALTNDPPRSRHAPIGQRW--IL 615 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 D L C + C CP ++ AK Sbjct: 616 DVMDL--CLSCKACKSECPSNVDLAKL 640 >gi|91775254|ref|YP_545010.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91775398|ref|YP_545154.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91709241|gb|ABE49169.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] gi|91709385|gb|ABE49313.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 461 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 25/87 (28%), Gaps = 12/87 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER------LDNL 218 C +CP Y PA + Y W+ R E + R L + Sbjct: 202 YVAAGFAREDVCFVACP-YGKFQGVMQDPATVTVIYDWV---RGEGRRGRKAPTAELKTV 257 Query: 219 ED--PFRLYRCHTIMNCTQSCPKGLNP 243 E C C CP G++ Sbjct: 258 ESRRQQGFGDCIDCNYCVNVCPTGVDI 284 >gi|325829764|ref|ZP_08163222.1| electron transport complex, RnfABCDGE type, C subunit [Eggerthella sp. HGA1] gi|325487931|gb|EGC90368.1| electron transport complex, RnfABCDGE type, C subunit [Eggerthella sp. HGA1] Length = 442 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 22/108 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D + C+ C C+ SCP L P + +AY + Sbjct: 353 LVFSKDAMEQPATTACIRCGRCTNSCPMQ-------LSPIAIKKAY----------TVQD 395 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG--LNPAKAIAK--IKMMLLDRK 258 L+D C C+ CP L +A+ ++ + R Sbjct: 396 AKKLDDLMA-DLCMGCGTCSFVCPAKQPLAQTSKLARDFMRAEMARRG 442 >gi|295092000|emb|CBK78107.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10] Length = 328 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 24/100 (24%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +Q+ G C+ C C C +L ++ ID D ERL L Sbjct: 1 MKQQETIGADACIHCHLCRDRC--------EFL--------RKYNIDIGDT---ERLREL 41 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C++ CP G++ K + ++ ++++ Sbjct: 42 A-----YSCFLCGKCSEICPLGIDGRKIVLDMRRERVEQQ 76 >gi|311694465|gb|ADP97338.1| formate dehydrogenase, alpha subunit [marine bacterium HP15] Length = 963 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 58/232 (25%), Gaps = 54/232 (23%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG---ICGSCGMNIDGTNTLACVKDMK 105 V++ L + +I P L + + C +C + ++G LA + Sbjct: 21 DVEVQAYPGETLWQVAKRAGEIIPHLCFKDAPGYRADGNCRACMVEVEGERVLAASCIRE 80 Query: 106 DIKGAIA---------------VYPLPHMSVIKDLVVDMSHFY----------------- 133 G + + L ++ D S Sbjct: 81 AAPGMVVRSAGSSRVQAARKGVLELLLADQPERESSPDRSSHLWDTADQLAIDAAAVRQR 140 Query: 134 ---SQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSD 188 R + H+ L C+ C C +C + Sbjct: 141 LPARSDRDGPTVHHVEPRSDSLPHAGGHDATHSAMNVNLDACITCGLCERAC--REVQGN 198 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G A A + + D +DP C C Q+CP G Sbjct: 199 DVIGLAHRGAASKVIFD------------FDDPMGDSTCVACGECVQACPTG 238 >gi|167856054|ref|ZP_02478797.1| electron transport complex protein RnfC [Haemophilus parasuis 29755] gi|167852803|gb|EDS24074.1| electron transport complex protein RnfC [Haemophilus parasuis 29755] Length = 629 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 30/117 (25%), Gaps = 23/117 (19%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ++ + H + + C+ C+ CS +CP Y Sbjct: 352 QSPITKTANCIIAPDHFEYAPPEPERNCIRCSSCSDACPVDLLPQQLYWFARAED----- 406 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 D+ + + L C C CP + I + KI Sbjct: 407 ----HDKSK---------EYHLDACIECGVCAYVCPSYIPL---IQYFRQE--KAKI 445 >gi|299530179|ref|ZP_07043605.1| Mbh14 iron-sulfur protein [Comamonas testosteroni S44] gi|298721836|gb|EFI62767.1| Mbh14 iron-sulfur protein [Comamonas testosteroni S44] Length = 430 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 + C CP Y ++ +Y R E +G R +++ L Sbjct: 168 AGYMREQVCKYMCP-YARFQSAMFDKDTMIVSYDAE---RGEARGPRKKDVDYKAQGLGD 223 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 224 CIDCKLCVQVCPVGIDI 240 >gi|326775114|ref|ZP_08234379.1| iron-sulfur cluster binding protein [Streptomyces cf. griseus XylebKG-1] gi|326655447|gb|EGE40293.1| iron-sulfur cluster binding protein [Streptomyces cf. griseus XylebKG-1] Length = 517 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + +DP Y Sbjct: 329 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHAAK----DDPNSSLPYA 384 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 385 SSLCGACFDACPVKIDIPSLLVELRHQ 411 >gi|282862564|ref|ZP_06271625.1| iron-sulfur cluster binding protein [Streptomyces sp. ACTE] gi|282562250|gb|EFB67791.1| iron-sulfur cluster binding protein [Streptomyces sp. ACTE] Length = 516 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + +DP Y Sbjct: 329 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHAAK----DDPNSSLPYA 384 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 385 SSLCGACFDACPVKIDIPSLLVELRHQ 411 >gi|264677950|ref|YP_003277857.1| Mbh14 iron-sulfur protein [Comamonas testosteroni CNB-2] gi|262208463|gb|ACY32561.1| Mbh14 iron-sulfur protein [Comamonas testosteroni CNB-2] Length = 453 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 + C CP Y ++ +Y R E +G R +++ L Sbjct: 191 AGYMREQVCKYMCP-YARFQSAMFDKDTMIVSYDAE---RGEARGPRKKDVDYKAQGLGD 246 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 247 CIDCKLCVQVCPVGIDI 263 >gi|239982965|ref|ZP_04705489.1| putative iron-sulfur protein [Streptomyces albus J1074] gi|291454799|ref|ZP_06594189.1| iron-sulfur cluster binding protein [Streptomyces albus J1074] gi|291357748|gb|EFE84650.1| iron-sulfur cluster binding protein [Streptomyces albus J1074] Length = 522 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + +DP Y Sbjct: 330 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHAAK----DDPNSSLPYA 385 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 386 SSLCGACFDACPVKIDIPSLLVELRHQ 412 >gi|182434589|ref|YP_001822308.1| putative iron-sulfur protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463105|dbj|BAG17625.1| putative iron-sulfur protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 517 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + +DP Y Sbjct: 329 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHAAK----DDPNSSLPYA 384 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 385 SSLCGACFDACPVKIDIPSLLVELRHQ 411 >gi|118467953|ref|YP_886830.1| D-lactate dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118169240|gb|ABK70136.1| D-lactate dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 952 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 25/90 (27%), Gaps = 7/90 (7%) Query: 158 HEDRQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 +D CV C CPSY + + ++ G Sbjct: 544 DDDHDFAQAQRRCVGIGKCRQHSGGVMCPSYQVTREELHSTRGRARLLWEMLQGDVVADG 603 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R + D L C + C CP ++ Sbjct: 604 WRSTEVRDA--LDLCLSCKGCLSDCPVNVD 631 >gi|114764832|ref|ZP_01444014.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Pelagibaca bermudensis HTCC2601] gi|114542718|gb|EAU45741.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseovarius sp. HTCC2601] Length = 477 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 31/153 (20%), Gaps = 5/153 (3%) Query: 93 DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 + L K M K + + +I FY Sbjct: 133 NARLRLHRQKKMDARKLRLRITKWVAWFLIALATGGAWIFYFTDAPTLMVNLVTGNAHPV 192 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 C +CP + + + W + R + + Sbjct: 193 AYTTMLVLTATTFAFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRDWRGEPRGKHRK 252 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L C C CP G++ Sbjct: 253 G-----AGAENLGDCIDCHACVNVCPMGIDIRD 280 >gi|332284694|ref|YP_004416605.1| hypothetical protein PT7_1441 [Pusillimonas sp. T7-7] gi|330428647|gb|AEC19981.1| hypothetical protein PT7_1441 [Pusillimonas sp. T7-7] Length = 499 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 15/106 (14%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLID 205 + G + A C CP S + D ++ + Sbjct: 214 PWQWFWMVFYAFATWGNAGFMREAVCKYMCPYARFQSVMVDDDTFVVTYDHV-------- 265 Query: 206 SRDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R E +G R ++ + C C Q CP G++ + + Sbjct: 266 -RGEPRGGRSRRIDHKEAGMGDCVDCSLCVQVCPTGIDIRDGLQYM 310 >gi|330446485|ref|ZP_08310137.1| electron transport complex, RnfABCDGE type, C subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490676|dbj|GAA04634.1| electron transport complex, RnfABCDGE type, C subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 852 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 26/104 (25%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L ++ C+ C+ C+ CPS L Q Y Sbjct: 351 SNVPITKMTNCILAPKRKELPLHTYEMACIRCSACADVCPSSLLPQQ--LQWYAKDQNY- 407 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + L C C CP + + Sbjct: 408 ---------------EKCEEYNLQDCIECGACAYVCPSEIPLVQ 436 >gi|291545699|emb|CBL18807.1| hypothetical protein CK1_05090 [Ruminococcus sp. SR1/5] Length = 345 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 21/133 (15%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + ++ +E + C+ C C+ CP+ + Sbjct: 201 IELLPYTHLSLEGWAQEEYMDRFNSPVWEKLYKPCLACGTCTFVCPTCQCYDIKDYDTGH 260 Query: 196 LLQAYR-----------WLIDSRDEF------QGERLDNLE----DPFRLYRCHTIMNCT 234 + YR + + + + L + ++ C C Sbjct: 261 GVHRYRCWDSCMYSDFTMMAHGNNRTSQMQRFRQRFMHKLVYYPLNNDGMFSCVGCGRCV 320 Query: 235 QSCPKGLNPAKAI 247 + CP+ LN K I Sbjct: 321 EKCPESLNIVKVI 333 >gi|262393720|ref|YP_003285574.1| electron transport complex protein RnfC [Vibrio sp. Ex25] gi|262337314|gb|ACY51109.1| electron transport complex protein RnfC [Vibrio sp. Ex25] Length = 916 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 18/116 (15%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C+ C+ +CP+ L P L Sbjct: 350 SQVPITKTANCILAPTRREISPHQHEMECIRCSQCAEACPAS-------LLPQQLQWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + E D LE L C C CP + + + K + R Sbjct: 401 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTR 447 >gi|237733731|ref|ZP_04564212.1| aldo/keto reductase [Mollicutes bacterium D7] gi|229383069|gb|EEO33160.1| aldo/keto reductase [Coprobacillus sp. D7] Length = 372 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 12/140 (8%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V LP++ V+ + + + + + + A +Q D K C Sbjct: 238 VASLPNVKVVLSGMSTYGQVLDNLATFKNFEYLKAEEVAL--IQDVRDTLKARTQNGCTG 295 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C CP + + ++ DS D+F+ + L+ + + C Sbjct: 296 CAYCMP-CPFGVDIPNNF-----KYWNNAFVYDSHDQFKAK-LEKMVSEAKAENCKQCGA 348 Query: 233 CTQSCPKGLNPAKAIAKIKM 252 C + CP+ L + +K Sbjct: 349 CEKMCPQQLPIRE---DLKR 365 >gi|114778363|ref|ZP_01453210.1| (S)-2-hydroxy-acid oxidase [Mariprofundus ferrooxydans PV-1] gi|114551326|gb|EAU53883.1| (S)-2-hydroxy-acid oxidase [Mariprofundus ferrooxydans PV-1] Length = 1269 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 9/117 (7%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA-------YR 201 + +L++ + + + C+ C C C +++ ++ P +QA + Sbjct: 788 EMESMILEAADLTDLSESISPCLRCGKCKPVCNTHFPRANMLYSPRNKIQATGAIIEAFL 847 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + E+ + L D C C CP ++ + ++ +L D+ Sbjct: 848 YESQTGSGISFEQFEGLHDV--ADHCTICHKCESPCPVNIDFGEVTESLRALLKDKG 902 >gi|308162304|gb|EFO64710.1| Pyruvate-flavodoxin oxidoreductase [Giardia lamblia P15] Length = 1253 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 49/179 (27%), Gaps = 35/179 (19%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH--RSIE 140 I C + D D + P P V ++ ++ ++ + + Sbjct: 636 SIIEQCHIEYDRARW--INADPSESTANQTYGPEPDKYVKDIILPAVTRKFANIGTKDVM 693 Query: 141 PWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + P +K + C+ C CS CP ++ Sbjct: 694 KYNSGKIPGGYSKYEKLGSAAKVPTWKKENCIQCGFCSVQCP------------HAAVRC 741 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLY------------------RCHTIMNCTQSCPKG 240 + D++ + E + L+ +L C C ++CPK Sbjct: 742 FVMNEDAKPDNVPEDFEMLDMKGKLAAVNSDSSKIKFRVQVSPLDCRGCGVCVEACPKD 800 >gi|256393997|ref|YP_003115561.1| FAD linked oxidase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256360223|gb|ACU73720.1| FAD linked oxidase domain protein [Catenulispora acidiphila DSM 44928] Length = 1043 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 35/132 (26%), Gaps = 9/132 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + +V R W V P +D + CV C Sbjct: 536 PGDKMNPGKIVRPYRVDENLRLGADWRPQVLPTHFDY---PDDDHDFTRAVMRCVGVGNC 592 Query: 177 STS-----CPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTI 230 T CPSY + + ++ D + + E L C Sbjct: 593 RTHEGGVMCPSYRATGEEEHSTRGRARLLFEMLGGHKDSPITDGWRSTEVHDALDLCLAC 652 Query: 231 MNCTQSCPKGLN 242 C CP G++ Sbjct: 653 KGCKSDCPVGVD 664 >gi|134045844|ref|YP_001097330.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanococcus maripaludis C5] gi|132663469|gb|ABO35115.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanococcus maripaludis C5] Length = 778 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 17/90 (18%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 EC C C CP+ R ++D+ L L D + Sbjct: 403 AKECTECGWCVRVCPNN-----------------RPIMDAVTAAAKGDLKKLADLYEYDM 445 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C+T C + C + L I K L+ Sbjct: 446 CYTCGRCEEECERNLPLVSFITKAGDHLVK 475 >gi|317048250|ref|YP_004115898.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pantoea sp. At-9b] gi|316949867|gb|ADU69342.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pantoea sp. At-9b] Length = 1175 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 9/96 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRW 202 + ++ + I C C C +CP + + + P + Sbjct: 666 PTGTTQWEKRNIAEAIPIWQPDLCTQCNHCVAACP-HSAIRAKVVTPEALEGAPISLASL 724 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + SRD + + + C C + CP Sbjct: 725 DVKSRDMRGQKYVLQVAPED----CTGCNLCVEVCP 756 >gi|325105659|ref|YP_004275313.1| NADH dehydrogenase subunit I [Pedobacter saltans DSM 12145] gi|324974507|gb|ADY53491.1| NADH dehydrogenase subunit I [Pedobacter saltans DSM 12145] Length = 175 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + + L + H + + +I+ + + H ++ G C C C+ SC Sbjct: 27 IAQGLSITFKHLFKKKVTIQY--PFEEREFSNNWRGMHSLKRDEQGRERCTACGLCALSC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E+ + + L RC C ++CPK Sbjct: 85 PAEAITMISAERKKGEENLYR----------EEKYAAVYEINML-RCIFCGLCEEACPKE 133 >gi|283797788|ref|ZP_06346941.1| conserved hypothetical protein [Clostridium sp. M62/1] gi|291074471|gb|EFE11835.1| conserved hypothetical protein [Clostridium sp. M62/1] Length = 328 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 24/100 (24%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +Q+ G C+ C C C +L ++ ID D ERL L Sbjct: 1 MKQQETTGADACIHCHLCRDRC--------EFL--------RKYNIDIGDT---ERLREL 41 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C++ CP G++ K + ++ ++++ Sbjct: 42 A-----YSCFLCGKCSEICPLGIDGRKIVLDMRRERVEQQ 76 >gi|218280919|ref|ZP_03487529.1| hypothetical protein EUBIFOR_00087 [Eubacterium biforme DSM 3989] gi|218217775|gb|EEC91313.1| hypothetical protein EUBIFOR_00087 [Eubacterium biforme DSM 3989] Length = 367 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 45/138 (32%), Gaps = 13/138 (9%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++ V+ + ++ ++ + + L D+ + C C Sbjct: 236 LKNVRVVLSGMSNLEQLNDNISYMKEFKPLTQEENNF--LIKLGDQIRTSIAIPCTACNY 293 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCT 234 C+ CP + + + + + + + ++L++ C C Sbjct: 294 CTPGCPKQICIPEYF-------RLFNKRKQNLSSGKSKEYEDLKNEHGRPLDCIECGQCE 346 Query: 235 QSCPKGLNPAKAIAKIKM 252 + CP+ L I+ +K Sbjct: 347 RVCPQKLPI---ISNLKK 361 >gi|281357846|ref|ZP_06244332.1| hydrogenase, Fe-only [Victivallis vadensis ATCC BAA-548] gi|281315793|gb|EFA99820.1| hydrogenase, Fe-only [Victivallis vadensis ATCC BAA-548] Length = 578 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 58/207 (28%), Gaps = 35/207 (16%) Query: 55 CGPMVLDGLLYIKNKIDPTLTLRRSC-----REGICGSCGMNIDGTNTLAC-VKDMKDIK 108 G +L+ ++ KI + C R C C + + G LA Sbjct: 16 PGSTILEAAEKLEIKIPTLCHFKMDCFHVDHRSASCRICVVEVKGRPNLAPACSTPAAEG 75 Query: 109 GAIAVYPLPHMSVI------------KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + L ++ KD ++ + Q +++ + E Sbjct: 76 MEVHTNTLRAINARRTILDLLLSDHPKDCLICPKNLNCQLQALAQEMGLHHLLYKGEQST 135 Query: 157 SHED---RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++D + L +C+MC C T+C + Sbjct: 136 YNKDLSSQAIARDLDKCIMCRRCETACNAIQTVGVLSGVGRGFNAV----------VAPA 185 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L L + C C Q+CP G Sbjct: 186 GLKPLAETE----CVFCGQCVQACPVG 208 >gi|187479570|ref|YP_787595.1| FAD-linked oxidase [Bordetella avium 197N] gi|115424157|emb|CAJ50710.1| probable FAD-linked oxidase [Bordetella avium 197N] Length = 1320 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 854 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLRHWEEFEDV 913 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 914 --ADHCTVCHKCYTPCPVDIDFGDVSMNMRALL 944 >gi|15668177|ref|NP_246968.1| formate dehydrogenase subunit beta [Methanocaldococcus jannaschii DSM 2661] gi|2494429|sp|Q60316|FDHB_METJA RecName: Full=Formate dehydrogenase subunit beta gi|1590818|gb|AAB97986.1| formate dehydrogenase, beta subunit [Methanocaldococcus jannaschii DSM 2661] Length = 379 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 26/186 (13%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMS 130 R C C + I LAC + + + +++D + Sbjct: 179 GRRKNCQRCEIMIPRMADLACGNWGAEKGWTFVEICSERGRKLVEDAEKDGYIKIKQPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCP----SYW 184 IE + ++ K K+ L+ + Y C+ C C +CP Sbjct: 239 KAIQVREKIESIMIKLAKKFQKKHLEEEYPSLEKWKKYWNRCIKCYGCRDNCPLCFCVEC 298 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y+ + + RL ++ C C +CP + A Sbjct: 299 SLEKDYIEEKGKIPPNPLIFQGI------RLSHISQ-----SCINCGQCEDACPMDIPLA 347 Query: 245 KAIAKI 250 ++ Sbjct: 348 YIFHRM 353 >gi|323692711|ref|ZP_08106940.1| aldo/keto reductase [Clostridium symbiosum WAL-14673] gi|323503265|gb|EGB19098.1| aldo/keto reductase [Clostridium symbiosum WAL-14673] Length = 372 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 16/127 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYL 191 Q R ++K P KE E R+ ++ C C C CP + Sbjct: 252 EQMRDNISFMKDFKPLTQKERKVIEEVRKVLESCPTVPCTACGYCMEGCPESVAIYGTFQ 311 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR----CHTIMNCTQSCPKGLNPAKAI 247 I + +D + + C C CP+ ++ + Sbjct: 312 AVNIFKRY-------QDLNGAKGKYKWNTEGHGWGKASACIGCGACEAVCPQHISIRE-- 362 Query: 248 AKIKMML 254 ++K Sbjct: 363 -ELKKAA 368 >gi|311279740|ref|YP_003941971.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Enterobacter cloacae SCF1] gi|308748935|gb|ADO48687.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Enterobacter cloacae SCF1] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPDIKAINMMSRLEHVEEEKI 782 >gi|170290729|ref|YP_001737545.1| heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] gi|170174809|gb|ACB07862.1| Heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] Length = 656 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 39/155 (25%), Gaps = 13/155 (8%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 G ++ TL M + L +++ L + M + + Sbjct: 173 GFDVHLVEKRPTLGGHTAMMGVLNWEGRR-LSGREIVRTL-IKMVKDNPKIKVYTNSEVV 230 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + R+ C +C C CP D Y +A Sbjct: 231 KVDGSIGNFKITVM-RKPRYVNERCNLCGKCEEVCPV--SVPDEYEYGIKKRKAIYL--- 284 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ER + DP C C + CP Sbjct: 285 PYSGAYPERY--VIDPNS---CTFCGKCVEVCPVN 314 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 5/17 (29%), Positives = 8/17 (47%) Query: 226 RCHTIMNCTQSCPKGLN 242 RC+ C + CP + Sbjct: 253 RCNLCGKCEEVCPVSVP 269 >gi|239787506|emb|CAX83976.1| Electron transport complex protein [uncultured bacterium] Length = 490 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T CP + ++ ++ + E+L+ Sbjct: 362 NERPTSPCIRCGTCVTICPC----------GLVPVEMASFI-------RKEKLEEAA-KI 403 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C + +C+ CP + K L Sbjct: 404 GVMDCVSCGSCSYICPSHIPLVHYFNYAKGRL 435 >gi|224418290|ref|ZP_03656296.1| ferredoxin-type oxidoreductase [Helicobacter canadensis MIT 98-5491] gi|253827614|ref|ZP_04870499.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141822|ref|ZP_07804015.1| ferredoxin-type oxidoreductase [Helicobacter canadensis MIT 98-5491] gi|253511020|gb|EES89679.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130853|gb|EFR48470.1| ferredoxin-type oxidoreductase [Helicobacter canadensis MIT 98-5491] Length = 429 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 12/106 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ---AYRWLIDSRDEFQ 211 ++ +D + CV C C C + N D P + AY+ D+ Sbjct: 1 MEHFKDYNYLKTSDACVKCGKCLPDCTIFNINGDEATSPRGFIDLLGAYQRKEIPLDKNA 60 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + C T C CP L I I+ + + Sbjct: 61 KNIFET------CFLCTT---CVSVCPNSLPTDTLIENIRYEIAQK 97 >gi|170755456|ref|YP_001780021.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum B1 str. Okra] gi|169120668|gb|ACA44504.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum B1 str. Okra] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 361 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 403 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 404 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 436 >gi|188585133|ref|YP_001916678.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349820|gb|ACB84090.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 440 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 61/236 (25%), Gaps = 34/236 (14%) Query: 38 DNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT 97 D+ M T+ L + L + C G+ D T Sbjct: 221 DDDSLEVM-TFETKYPQGAEKQLIKAALDREVPSGGLPMDVGCVVNNTGTALAVADALRT 279 Query: 98 LACVKDMKDIKGAIAVYPLPHMSVI-----KDLVVDMSHFYSQHRSIEPWLKTVSPKPAK 152 + + + + V DL+ + Q R I + Sbjct: 280 NKPILERVVTISGPGIEQSGNFMVRLGTLASDLIEQLGGMGDQTRKIIMGGPMMGISQPN 339 Query: 153 EL----------LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L + +I C+ C C SCP + LG + Sbjct: 340 ADFPVIKGTSGVLLLTDQEVQIFEERPCINCGRCVDSCPISLLPN--LLGT--------F 389 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + R + + E + L+ C CT CP I K ++ ++ Sbjct: 390 MEHERPD-KAEDFNALD-------CIECGCCTYICPARRPLVHYIRVAKGEIMAKR 437 >gi|153931630|ref|YP_001382770.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A str. ATCC 19397] gi|153936091|ref|YP_001386321.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A str. Hall] gi|152927674|gb|ABS33174.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A str. ATCC 19397] gi|152932005|gb|ABS37504.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A str. Hall] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 361 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 403 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 404 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 436 >gi|153207231|ref|ZP_01945995.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165918772|ref|ZP_02218858.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii RSA 334] gi|120576719|gb|EAX33343.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917496|gb|EDR36100.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii RSA 334] Length = 163 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + +FY + + + R+ +G C+ C C Sbjct: 15 ELLKGLSLTLRYFYR--KKVTIHYPDEEVPSSFRFRGMLALRRYPNGEERCIACKLCEAF 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP E G R L D ++C C ++CP Sbjct: 73 CPACAITIEA--GPR--------------EADGSRRTTLYDIDA-FKCINCGFCEEACPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|119873445|ref|YP_931452.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674853|gb|ABL89109.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 411 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 13/106 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + CV C C CPSY D P L+ R + E Sbjct: 17 RRITHMAYASLAARACVKCRNCVEICPSYIATRDIKYSPMGRLELLR-------KGASE- 68 Query: 215 LDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 E+ F+++ C C CP GL+ A+ +++ L R + Sbjct: 69 ----EEKFKVFSLCTMCKRCAYFCPLGLDVAEVTRQVRDFLAARGM 110 >gi|33603461|ref|NP_891021.1| iron-sulfur binding oxidase [Bordetella bronchiseptica RB50] gi|33577585|emb|CAE34850.1| probable iron-sulfur binding oxidase [Bordetella bronchiseptica RB50] Length = 1320 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 854 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISLKHWEEFEDV 913 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 914 --ADHCTVCHKCYTPCPVDIDFGDVSMNMRALL 944 >gi|33591393|ref|NP_879037.1| iron-sulfur binding oxidase [Bordetella pertussis Tohama I] gi|33571035|emb|CAE40521.1| probable iron-sulfur binding oxidase [Bordetella pertussis Tohama I] gi|332380794|gb|AEE65641.1| iron-sulfur binding oxidase [Bordetella pertussis CS] Length = 1299 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 833 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISLKHWEEFEDV 892 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 893 --ADHCTVCHKCYTPCPVDIDFGDVSMNMRALL 923 >gi|34762677|ref|ZP_00143668.1| Electron transport complex protein rnfC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887634|gb|EAA24712.1| Electron transport complex protein rnfC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 279 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L H + ++ + + + K LL + + C+ C Sbjct: 152 YILDHCGINREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKSCISC 211 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP L+ R E + + L C +C Sbjct: 212 SKCVSACPMGLAP----------------LMFDRLAAAKEYEEMVV--HNLMDCIECGSC 253 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A++I K L +K Sbjct: 254 AYICPANRPLAESIKTGKAKLRAKK 278 >gi|148378371|ref|YP_001252912.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A str. ATCC 3502] gi|148287855|emb|CAL81921.1| electron transport complex protein [Clostridium botulinum A str. ATCC 3502] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 361 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 403 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 404 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 436 >gi|114321660|ref|YP_743343.1| formate dehydrogenase, alpha subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114228054|gb|ABI57853.1| NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein [Alkalilimnicola ehrlichii MLHE-1] Length = 927 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 64/218 (29%), Gaps = 47/218 (21%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKIDPTL-TLRRSCREG---ICGSCGMNIDGTNTLACVK 102 T+ +D + + LL + + L TL C +C + I+G LA Sbjct: 13 TFTLDGETVTAGPGETLLQVARRQGQALPTLCHQPGYRPAGNCRACMVEIEGERVLAPAC 72 Query: 103 DMKDIKGAIAVYPLPHMSVIK------------------DLVVDMSHFYSQHRSIEPWLK 144 + P P M V D+ ++ + L Sbjct: 73 VRQ---------PSPGMVVHSTSGRAARARRMVLELLQSDMPAAARTPDNELQQWCDRLG 123 Query: 145 TVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +P+ + + L C+ C C +C N ++ A+R Sbjct: 124 VDAPRFPARSQPAPDASHPAMSVRLDACIQCTRCLRACREEQAND-------VIGMAHR- 175 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + +L DP C C Q+CP G Sbjct: 176 ------GDRTAVVFDLADPMGRSSCVACGECVQACPTG 207 >gi|293401465|ref|ZP_06645608.1| putative electron transport complex, RnfABCDGE type, C subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305103|gb|EFE46349.1| putative electron transport complex, RnfABCDGE type, C subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 430 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 18/98 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 K C+ C CS CP+ L P + QA + ++D+ E+L L+ Sbjct: 350 ANKPYDSVACLRCGKCSDHCPA-------GLQPVRIAQAVK----TKDKNAMEKLCALD- 397 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP L+ + + K K L+ K Sbjct: 398 ------CIECGLCTFICPSRLDVTENVRKAKRQLMMAK 429 >gi|269962090|ref|ZP_06176444.1| RnfC-related protein [Vibrio harveyi 1DA3] gi|269833174|gb|EEZ87279.1| RnfC-related protein [Vibrio harveyi 1DA3] Length = 910 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 19/102 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E + C+ C+ C+ +CP+ L Q Y Sbjct: 353 PITKTANCILAPKRREIASDQYEME-CIRCSQCAEACPASLLPQQ--LQWYAKSQEY--- 406 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 E+L+ L L C C CP + + Sbjct: 407 ---------EKLEELN----LKDCIECGACAFVCPSEIPLVQ 435 >gi|260463691|ref|ZP_05811889.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium opportunistum WSM2075] gi|319785177|ref|YP_004144653.1| cytochrome C oxidase accessory protein CcoG [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259030545|gb|EEW31823.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium opportunistum WSM2075] gi|317171065|gb|ADV14603.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 519 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 19/82 (23%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP-FR 223 + C+ CP D R E + ++ Sbjct: 217 YTFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYNDWRGEPRSRHAKKVQASGHS 272 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 273 VGDCVDCNACVAVCPMGIDIRD 294 >gi|188585708|ref|YP_001917253.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350395|gb|ACB84665.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 441 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 18/90 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP+Y ++ + R + N D C Sbjct: 366 PCINCGRCVDDCPAYLL----------PNVIAHYMENGRVNESED--YNAMD------CI 407 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT CP I K ++ ++ Sbjct: 408 ECGCCTYICPANRPLVHYIRMAKADIMKKR 437 >gi|168177711|ref|ZP_02612375.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum NCTC 2916] gi|182670754|gb|EDT82728.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum NCTC 2916] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 361 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 403 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 404 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 436 >gi|222479821|ref|YP_002566058.1| FAD linked oxidase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452723|gb|ACM56988.1| FAD linked oxidase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 1023 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 16/103 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLID- 205 ++ D + C C C CP+Y + + R ++ Sbjct: 595 MEWAIDNGMQGMVELCHGCGGCRGPQETTGGVMCPTYRASEEEIQATRGRANMLRGAMNG 654 Query: 206 --SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 D E + + D C CT+ CP G++ AK Sbjct: 655 ELPDDPTDDEFVTEVMD-----LCVGCKGCTKDCPSGVDMAKL 692 >gi|152990044|ref|YP_001355766.1| NADH dehydrogenase subunit G [Nitratiruptor sp. SB155-2] gi|151421905|dbj|BAF69409.1| NADH-quinone oxidoreductase, chain G [Nitratiruptor sp. SB155-2] Length = 827 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 52/200 (26%), Gaps = 42/200 (21%) Query: 72 PTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIKGAIAV--YPLP----------- 117 P + SC C C + DG AC KD + V L Sbjct: 34 PAICYLTSCSPTLACRLCLVEADGKQVYACNAKAKDGMNIVTVTENILKERRAIMEVYDV 93 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + + Q+ ++E + + C++C C Sbjct: 94 NHPLECGVCDQSGECELQNYTLEMKVDEQHYAIRDTYRPVKKWNFIHYDSSLCIVCERCV 153 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-EDPFRLYR---------- 226 T C D A + + D+ E D + +D + ++ Sbjct: 154 TVCKD--MIGDA---------ALKTVPRGGDKLGKEWKDEMPKDAYAMWNKLQKSIIGAV 202 Query: 227 ------CHTIMNCTQSCPKG 240 C C CP G Sbjct: 203 TGEELDCTWCGECISVCPVG 222 >gi|323704061|ref|ZP_08115673.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] gi|323530976|gb|EGB20903.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum nigrificans DSM 574] Length = 424 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 20/110 (18%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K + ++ + +C+ C C+ CP + D Sbjct: 19 DFSKMDPKFRDEVMEKLQNIDWTQCLACGMCTAGCPYSDIHG---------------NND 63 Query: 206 SRDEFQGERL----DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L + L+DPF ++ C CT CP G+N ++ Sbjct: 64 PRKFLRKLVLGLREEALKDPF-IWNCTVCERCTVECPMGVNFGIITRGMR 112 >gi|284047498|ref|YP_003397837.1| electron transport complex, RnfABCDGE type, C subunit [Acidaminococcus fermentans DSM 20731] gi|283951719|gb|ADB46522.1| electron transport complex, RnfABCDGE type, C subunit [Acidaminococcus fermentans DSM 20731] Length = 455 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 23/93 (24%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-- 225 CV CA C +CP L P ++QA + N +D R + Sbjct: 371 DPCVHCARCVDACPMK-------LEPTEIVQAVK-------------KQNWDDAERFFCH 410 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +C CP + + I ++ + K Sbjct: 411 ACIECGSCAFVCPAHIPLVQYI-RMGKQFIRGK 442 >gi|257462466|ref|ZP_05626878.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. D12] gi|317060123|ref|ZP_07924608.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. D12] gi|313685799|gb|EFS22634.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. D12] Length = 436 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 22/144 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L V ++ V + + + K LL ++ C+ C Sbjct: 309 YLLDACGVDREKVDKLVMGGPMMGMAQFSEEAPVIKGTSGLLALTKEETNPYKPKACIGC 368 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C ++CP L P + + + ++ + L++ L C +C Sbjct: 369 GKCVSACPMS-------LEPVMFARLAAF----------QQWEGLQNYH-LMDCIECGSC 410 Query: 234 TQSCPKGLNPAKAI----AKIKMM 253 CP +AI AK++ M Sbjct: 411 AFICPANRPLTEAIKIGKAKLRSM 434 >gi|255655136|ref|ZP_05400545.1| electron transport complex protein [Clostridium difficile QCD-23m63] gi|296451124|ref|ZP_06892865.1| Na(+)-translocating NADH-quinone reductase subunit A [Clostridium difficile NAP08] gi|296880524|ref|ZP_06904486.1| Na(+)-translocating NADH-quinone reductase subunit A [Clostridium difficile NAP07] gi|296259945|gb|EFH06799.1| Na(+)-translocating NADH-quinone reductase subunit A [Clostridium difficile NAP08] gi|296428478|gb|EFH14363.1| Na(+)-translocating NADH-quinone reductase subunit A [Clostridium difficile NAP07] Length = 445 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 19/125 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + K + +L E+ + + C+ C C+ CPS +L P Sbjct: 333 MMGIAQYTTEIATNKGSSGILCLDEEESRTPDVQNCLRCGRCTDVCPS-------FLQP- 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + AY +D++ D C +C+ CP ++I K + Sbjct: 385 LFISAYSL----KDDYDTAEYHRAMD------CIECGSCSFICPARRPLLQSIRSAKREI 434 Query: 255 -LDRK 258 R+ Sbjct: 435 GAKRR 439 >gi|163788411|ref|ZP_02182857.1| probable oxidoreductase [Flavobacteriales bacterium ALC-1] gi|159876731|gb|EDP70789.1| probable oxidoreductase [Flavobacteriales bacterium ALC-1] Length = 976 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 32/114 (28%), Gaps = 11/114 (9%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + K LL + + +C C T CPSY D Sbjct: 539 RYQVDRKEPEIKTLLDFSNSQGILREAEKCNGSGDCRKLPEFGGTMCPSYRATKDEKNTT 598 Query: 194 AILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R +L +S + + + C + C CP ++ A Sbjct: 599 RARANALREFLTNSENANKFNHSEL---KEVFDLCLSCKACASECPSSVDVASL 649 >gi|153938550|ref|YP_001389736.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum F str. Langeland] gi|168181230|ref|ZP_02615894.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum Bf] gi|170759143|ref|YP_001785705.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A3 str. Loch Maree] gi|226947599|ref|YP_002802690.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A2 str. Kyoto] gi|237793688|ref|YP_002861240.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum Ba4 str. 657] gi|152934446|gb|ABS39944.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum F str. Langeland] gi|169406132|gb|ACA54543.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A3 str. Loch Maree] gi|182675506|gb|EDT87467.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum Bf] gi|226843244|gb|ACO85910.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum A2 str. Kyoto] gi|229260411|gb|ACQ51444.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum Ba4 str. 657] gi|295317824|gb|ADF98201.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium botulinum F str. 230613] Length = 439 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 361 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 403 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 404 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 436 >gi|114765214|ref|ZP_01444346.1| FAD linked oxidase [Pelagibaca bermudensis HTCC2601] gi|114542349|gb|EAU45377.1| FAD linked oxidase [Roseovarius sp. HTCC2601] Length = 946 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + +G +C+ A + CPS+ D P A R + + ++ Sbjct: 545 EKAFRCNGNAQCLSYAAATPMCPSFKATEDLRHSPKGRADAMRAWQEGKRTGAQT-VEEA 603 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNP 243 + L C C +CP ++ Sbjct: 604 DLLGTLDTCLGCKACASTCPVQVDI 628 >gi|322804644|emb|CBZ02196.1| electron transport complex protein RnfC [Clostridium botulinum H04402 065] Length = 403 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L + E+ + Sbjct: 325 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRGE--LASFEELHGI 367 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 368 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 400 >gi|254498959|ref|ZP_05111662.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella drancourtii LLAP12] gi|254351817|gb|EET10649.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella drancourtii LLAP12] Length = 386 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + + C+ C C++ CP+ + +S+ ++ DS Sbjct: 264 RWEEVAERCLSCGNCTSVCPTCFCHSEVEKPSLDGTSSEHQREWDSCFTSGHSALNGSIV 323 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 RD+ + + L + C CT CP G++ + +A I Sbjct: 324 RDDTRKQYRQWLTHKVGSWFDQFDTSGCVGCGRCTTWCPVGIDITEELAAI 374 >gi|227872180|ref|ZP_03990547.1| cysteine-rich domain protein [Oribacterium sinus F0268] gi|227841963|gb|EEJ52226.1| cysteine-rich domain protein [Oribacterium sinus F0268] Length = 329 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 24/104 (23%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + R+ + EC+ C C C ++L + E+ Sbjct: 1 MAEKKKREIHKRVEECIHCNACKRKC--------KFLTKYDICI-----------GDTEK 41 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L L Y C+ CT+ CPKG++ + I + + Sbjct: 42 LRELA-----YHCYLCGECTRVCPKGIDGREIILDFRKEQVKEG 80 >gi|297619345|ref|YP_003707450.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein [Methanococcus voltae A3] gi|297378322|gb|ADI36477.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus voltae A3] Length = 386 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 24/224 (10%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVK-- 102 D ++D ++ K L R C C + I +AC Sbjct: 145 FDVVKEEIDKGKFIIELKDGTHKGIKMHDLEHDGYGRRENCQRCDVKIPRKADVACGNWG 204 Query: 103 ---DMKDIKGAIAVYPLPHMSVIKDL---------VVDMSHFYSQHRSIEPWLKTVSPKP 150 + + V ++IKD + + + + +K Sbjct: 205 VIGEDAGKWTFVEVNTEKGQNLIKDAEKSGYIKTKAPNPKGIEIRDKVEQTMIKMSESGK 264 Query: 151 AKELLQSHED-RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 +L + D + + C+ C C +CP + + + + Sbjct: 265 KAQLETDYPDLSEWDEYFNRCIKCYGCRDACPVCF---------CVECAIPNFTTKGQIP 315 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + Y C C+ CP + AK K++ Sbjct: 316 PEPLMFHGVRMAHMAYSCVNCGQCSDVCPMEIPVAKIFHKVQER 359 >gi|78484971|ref|YP_390896.1| hypothetical protein Tcr_0626 [Thiomicrospira crunogena XCL-2] gi|78363257|gb|ABB41222.1| FAD-linked oxidoreductase [Thiomicrospira crunogena XCL-2] Length = 930 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 12/107 (11%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTS------CPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 D +D + +C C S CPSY + R + + Sbjct: 519 YDWTRDLSLMDAVEKCNGAGACRKSAGNGVMCPSYQATREENYSTRGRSNLLRHALTEPN 578 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + D L+D L C C CP ++ +A++K +L Sbjct: 579 PLAALKKDELQDALSL--CLGCKACKSECPASVD----MARLKSEVL 619 >gi|153005855|ref|YP_001380180.1| FAD linked oxidase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029428|gb|ABS27196.1| FAD linked oxidase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 1227 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 9/87 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPA-------ILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C C C Y + P L++A + + E L L Sbjct: 776 IAHCVRCGKCKADCCVYHPARGMFFHPRNKNLAIGSLIEALLYDAQRERSTKFELLRWL- 834 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ + Sbjct: 835 -EEVADHCTICHKCAKPCPVDIDTGEV 860 >gi|14600571|ref|NP_147088.1| hypothetical protein APE_0257a [Aeropyrum pernix K1] gi|5103651|dbj|BAA79172.1| hypothetical protein [Aeropyrum pernix K1] Length = 56 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CP + + I+K+K R Sbjct: 20 YLCLGCGRCDEVCPVEIPLSSIISKLKARAASR 52 >gi|94309312|ref|YP_582522.1| FAD linked oxidase-like protein [Cupriavidus metallidurans CH34] gi|93353164|gb|ABF07253.1| Putative Fe-S oxidoreductase FAD/FMN-containing dehydrogenase oxidoreductase protein [Cupriavidus metallidurans CH34] Length = 1324 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSIKHWDEFSDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCVTPCPVKIDFGDVSMNMRNLL 943 >gi|325001901|ref|ZP_08123013.1| FAD linked oxidase-like protein [Pseudonocardia sp. P1] Length = 981 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 27/103 (26%), Gaps = 17/103 (16%) Query: 161 RQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQA---YRWLIDSRDEFQG 212 D C+ C + CPSY A D Sbjct: 565 AGMRDVADRCMNIGLCRKTTAGVMCPSYQVTLQEEHSTRGRANALVKALSEPDPAAALGD 624 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ERL + D C C CP ++ +A +K L Sbjct: 625 ERLHEILD-----LCLGCKACKSECPMSVD----MASLKSEAL 658 >gi|296329171|ref|ZP_06871672.1| electron transport complex protein RnfC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153527|gb|EFG94344.1| electron transport complex protein RnfC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 441 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L + + ++ + + + K LL + + C+ C Sbjct: 314 YILDNCGINREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKACISC 373 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + + D R E + L C +C Sbjct: 374 SKCVSACP---------------MGLAPLMFD-RLAAAKEYEEMA--AHNLMDCIECGSC 415 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A++I K L +K Sbjct: 416 AYICPANRPLAESIKTGKAKLRAKK 440 >gi|188587192|ref|YP_001918737.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351879|gb|ACB86149.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 440 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L + + CV C C CP Y + + + + + E Sbjct: 352 LVFPPEMLPEWDYHNCVKCGDCVAHCPMYLYPNKLSIFAEAEMY-----------REAED 400 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D ++ C C CP + I ++K Sbjct: 401 WDIMD-------CIECGLCVYQCPSNRPIVQFIKQVK 430 >gi|73668615|ref|YP_304630.1| hypothetical protein Mbar_A1082 [Methanosarcina barkeri str. Fusaro] gi|72395777|gb|AAZ70050.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 1015 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 8/132 (6%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 V M + I + + K+ + + + Y C C C + C Y+ Sbjct: 464 AVSMGSAFEPFARIAGNMSGIGEVSFKDEKEIPAEV--AELAYSCSQCGYCVSECDQYYG 521 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 P + + R++ C T C C + Sbjct: 522 RGWESQSPRGKWFFIKEYLAGREKLDQR------QTNTFLACTTCQMCDARCELDMPIEH 575 Query: 246 AIAKIKMMLLDR 257 A ++ L+ Sbjct: 576 AWMTMRGKLVQE 587 >gi|321224274|gb|EFX49337.1| Pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 1180 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|213419271|ref|ZP_03352337.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 561 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 470 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 528 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 529 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 556 >gi|169830758|ref|YP_001716740.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637602|gb|ACA59108.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 328 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 22/84 (26%), Gaps = 1/84 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C +CP+ + Q W+ + Q + Sbjct: 203 AFWERRFARCLRCYACRNACPACNCKECSFEQAVPGWQQGACWISKRTNPGQNGFFHLMR 262 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 RC C + CP + Sbjct: 263 MMHVAGRCVDCGECGRVCPVSIPL 286 >gi|168260149|ref|ZP_02682122.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350565|gb|EDZ37196.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|16764995|ref|NP_460610.1| pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992830|ref|ZP_02573926.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262637|ref|ZP_03162711.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16420178|gb|AAL20569.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240892|gb|EDY23512.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329036|gb|EDZ15800.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246843|emb|CBG24658.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993581|gb|ACY88466.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158179|emb|CBW17676.1| probable pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912639|dbj|BAJ36613.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129920|gb|ADX17350.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988538|gb|AEF07521.1| putative pyruvate-flavodoxin oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + + C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPVWKEELCTQCNHCVAACP-HSAIRAKVVSPQAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|327254042|gb|EGE65671.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli STEC_7v] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|325497401|gb|EGC95260.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia fergusonii ECD227] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|323976958|gb|EGB72045.1| ferredoxin oxidoreductase [Escherichia coli TW10509] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|323963945|gb|EGB59437.1| ferredoxin oxidoreductase [Escherichia coli M863] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|300937573|ref|ZP_07152388.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 21-1] gi|300457400|gb|EFK20893.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 21-1] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|254563948|ref|YP_003071043.1| Tungsten-containing formate dehydrogenase subunit alpha [Methylobacterium extorquens DM4] gi|254271226|emb|CAX27238.1| Tungsten-containing formate dehydrogenase alpha subunit [Methylobacterium extorquens DM4] Length = 989 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 52/250 (20%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD---LDNCGPMVLDGLLYIKNKID 71 G+ P+G +K D P + D ++ + + Sbjct: 48 GQAAPDPSGTYGIK---------DAPVAPATIAFEFDGQQVEAQPGETIWAVAKRLGTHI 98 Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACV------------------KDMKDIKGA 110 P L + C +C + I+G LA + + Sbjct: 99 PHLCHKPDPGYRPDGNCRACMVEIEGERVLAASCKRTPAIGMKVKSATERATKARAMVLE 158 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P + D SHF+ Q ++ A+ L C Sbjct: 159 LLVADQPERATSHD---PSSHFWVQADVLDV--TESRFPAAERWTSDVSHPAMSVNLDAC 213 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N ++ AYR + + + +DP C Sbjct: 214 IQCNLCVRACREVQVND-------VIGMAYR-------AAGSKVVFDFDDPMGGSTCVAC 259 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 260 GECVQACPTG 269 >gi|237734473|ref|ZP_04564954.1| electron transport complex [Mollicutes bacterium D7] gi|229382293|gb|EEO32384.1| electron transport complex [Coprobacillus sp. D7] Length = 442 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ED C+ C C CP L P +L + R E + Sbjct: 356 EDEVSKTAPTACIHCGRCVDVCPI-------GLIPQLLYRYAR-------TGDKENFLKV 401 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT +CP N ++ KIK + D + Sbjct: 402 HGND----CMECGCCTFTCPAKRNMTQSFKKIKKAINDDR 437 >gi|254385728|ref|ZP_05001050.1| oxidoreductase [Streptomyces sp. Mg1] gi|194344595|gb|EDX25561.1| oxidoreductase [Streptomyces sp. Mg1] Length = 984 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR--- 223 C+ C C +CPS D P + R ++ R LD L + Sbjct: 576 ADPCIECGFCEPACPS----KDLTTTPRQRILLRREMMRQRPGSP--VLDQLLADYGHDA 629 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP G++ + + Sbjct: 630 VDTCAGDSACKLACPVGIDTGALMKDFRHR 659 >gi|218532920|ref|YP_002423736.1| formate dehydrogenase, subunit alpha [Methylobacterium chloromethanicum CM4] gi|218525223|gb|ACK85808.1| formate dehydrogenase, alpha subunit [Methylobacterium chloromethanicum CM4] Length = 989 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 52/250 (20%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD---LDNCGPMVLDGLLYIKNKID 71 G+ P+G +K D P + D ++ + + Sbjct: 48 GQAAPDPSGTYGIK---------DAPVAPATIAFEFDGQQVEAQPGETIWAVAKRLGTHI 98 Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACV------------------KDMKDIKGA 110 P L + C +C + I+G LA + + Sbjct: 99 PHLCHKPDPGYRPDGNCRACMVEIEGERVLAASCKRTPAIGMKVKSATERATKARAMVLE 158 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P + D SHF+ Q ++ A+ L C Sbjct: 159 LLVADQPERATSHD---PSSHFWVQADVLDV--TESRFPAAERWTSDVSHPAMSVNLDAC 213 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N ++ AYR + + + +DP C Sbjct: 214 IQCNLCVRACREVQVND-------VIGMAYR-------AAGSKVVFDFDDPMGGSTCVAC 259 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 260 GECVQACPTG 269 >gi|163853978|ref|YP_001642021.1| formate dehydrogenase, alpha subunit [Methylobacterium extorquens PA1] gi|163665583|gb|ABY32950.1| formate dehydrogenase, alpha subunit [Methylobacterium extorquens PA1] Length = 989 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 52/250 (20%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVD---LDNCGPMVLDGLLYIKNKID 71 G+ P+G +K D P + D ++ + + Sbjct: 48 GQAAPDPSGTYGIK---------DAPVAPATIAFEFDGQQVEAQPGETIWAVAKRLGTHI 98 Query: 72 PTLTLRRSCREG---ICGSCGMNIDGTNTLACV------------------KDMKDIKGA 110 P L + C +C + I+G LA + + Sbjct: 99 PHLCHKPDPGYRPDGNCRACMVEIEGERVLAASCKRTPAIGMKVKSATERATKARAMVLE 158 Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + V P + D SHF+ Q ++ A+ L C Sbjct: 159 LLVADQPERATSHD---PSSHFWVQADVLDV--TESRFPAAERWTSDVSHPAMSVNLDAC 213 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C N ++ AYR + + + +DP C Sbjct: 214 IQCNLCVRACREVQVND-------VIGMAYR-------AAGSKVVFDFDDPMGGSTCVAC 259 Query: 231 MNCTQSCPKG 240 C Q+CP G Sbjct: 260 GECVQACPTG 269 >gi|332969741|gb|EGK08755.1| cytochrome c oxidase accessory protein CcoG [Kingella kingae ATCC 23330] Length = 475 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C CP Y L+ +Y + R E +G R N E Sbjct: 203 MVTWLFGHIMREQVCLHMCP-YARFQSAMFDHDTLVISY---DEERGEPRGARKKNAEHN 258 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 + C C Q CP G++ Sbjct: 259 D-MGDCINCTACVQVCPTGIDI 279 >gi|315619435|gb|EFU99979.1| pyruvate:ferredoxin oxidoreductase [Escherichia coli 3431] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLLVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|167760460|ref|ZP_02432587.1| hypothetical protein CLOSCI_02834 [Clostridium scindens ATCC 35704] gi|167661959|gb|EDS06089.1| hypothetical protein CLOSCI_02834 [Clostridium scindens ATCC 35704] Length = 324 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 24/88 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C +C + ++ ID D + E L Y C Sbjct: 12 CVHCGVCQKNC----------------VFLKKYGIDIGDTEKLEELA--------YHCFL 47 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 CT+ CP G++ + I +I+ + Sbjct: 48 CGKCTEVCPIGIDGRQKILQIRRQKVKE 75 >gi|160932756|ref|ZP_02080145.1| hypothetical protein CLOLEP_01597 [Clostridium leptum DSM 753] gi|156867830|gb|EDO61202.1| hypothetical protein CLOLEP_01597 [Clostridium leptum DSM 753] Length = 444 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 19/108 (17%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K +L E + C+ C C CP + + SR Sbjct: 351 KQNNAILAFQEQDAVLPAPTACIHCGRCVEGCPMHLMPPEI----------------SRA 394 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + +D L+ + C C +CP G + I ++ L+ Sbjct: 395 VTTKD-IDQLQ-KLGVMTCMECGTCAYNCPAGRQIVQNI-RLGKALVK 439 >gi|330509064|ref|YP_004385492.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanosaeta concilii GP-6] gi|328929872|gb|AEB69674.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit D [Methanosaeta concilii GP-6] Length = 456 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 9/98 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLI---DSRDEFQGERLDNLEDPFRL- 224 C C C CP++ DR + P +R L+ S ED +L Sbjct: 26 CNRCQECMKWCPTFAVRPDRPGITPMYKNARWRELMAKNHSLRAKIFGGKPLEEDEMKLF 85 Query: 225 ----YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C T C C G+ ++ L+ R Sbjct: 86 TEDVYYCTTCGVCGTVCEAGIKTVDLWEAMRPNLVARG 123 >gi|19704917|ref|NP_602412.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712812|gb|AAL93711.1| Nitrogen fixation iron-sulphur protein RNFC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 441 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 42/145 (28%), Gaps = 18/145 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L + + ++ + + + K LL + + C+ C Sbjct: 314 YILDNCGINREEMARLVMGGPMMGLAQMTEDATVIKGTSGLLALTNEEMRPYKTKACISC 373 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 + C ++CP + D R E + L C +C Sbjct: 374 SKCVSACPMGLAP---------------LMFD-RLAAAKEYEEMA--AHNLMDCIECGSC 415 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRK 258 CP A++I K L +K Sbjct: 416 AYICPANRPLAESIKTGKAKLRAKK 440 >gi|261339954|ref|ZP_05967812.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterobacter cancerogenus ATCC 35316] gi|288317867|gb|EFC56805.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterobacter cancerogenus ATCC 35316] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDSRD 208 ++ + I C C C +CP + + + P A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPQDMEAAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|1002882|gb|AAC44520.1| CcoG [Paracoccus denitrificans PD1222] Length = 484 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 3/72 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCHTIMNCT 234 C +CP + + W + R + + + C M C Sbjct: 214 CVYACPCPRIQPAMMDEDTLTVAYREWRGEPRGKLHKG--EPTKSDGGAKGDCIDCMACV 271 Query: 235 QSCPKGLNPAKA 246 CP G++ A Sbjct: 272 NVCPMGIDIRDA 283 >gi|54298471|ref|YP_124840.1| hypothetical protein lpp2535 [Legionella pneumophila str. Paris] gi|53752256|emb|CAH13688.1| hypothetical protein lpp2535 [Legionella pneumophila str. Paris] Length = 379 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 22/120 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + + C+ C C+ CP+ + +S+ G + DS Sbjct: 257 RWDEVAERCLSCGNCTLVCPTCFCHSEVEKPGLDGCTSEHHREWDSCFTTGHTYLNGKII 316 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ + + L + C C CP G++ + +A I RKI Sbjct: 317 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCATWCPVGIDITEELAAISGESNARKI 376 >gi|289191726|ref|YP_003457667.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus sp. FS406-22] gi|288938176|gb|ADC68931.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus sp. FS406-22] Length = 379 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 26/186 (13%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMS 130 R C C + + LAC + + + +++D + Sbjct: 179 GRRKNCQRCEVMVPRMADLACGNWGAEKGWTFVEICSEKGRKLVEDAEKEGYIKIKQPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCP----SYW 184 IE + ++ K K+ L++ + Y C+ C C +CP Sbjct: 239 KAIQIREKIENIMIKLAKKFQKKHLEAEYPSLEEWEKYWNRCIKCYGCRDNCPLCFCVEC 298 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y+ + + RL ++ C C +CP + A Sbjct: 299 RLEKDYIDEKGKIPPNPLIFQG------VRLSHIGQ-----SCINCGQCEDACPMDIPLA 347 Query: 245 KAIAKI 250 ++ Sbjct: 348 YIFHRM 353 >gi|239905237|ref|YP_002951976.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239795101|dbj|BAH74090.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 768 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 12/95 (12%) Query: 166 GLYECVMCAC--CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C C C +C +Y Y P + R + ++ QG R N Sbjct: 305 EAARCLDCQCLECVKAC-TYLARYKGY--PRVY---ARQIYNNLSIVQGARSYNQM---- 354 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C + CP G + I + ++ R Sbjct: 355 INSCTLCGQCEELCPSGFSMPDLILSARRDMVSRG 389 >gi|167756755|ref|ZP_02428882.1| hypothetical protein CLORAM_02302 [Clostridium ramosum DSM 1402] gi|167702930|gb|EDS17509.1| hypothetical protein CLORAM_02302 [Clostridium ramosum DSM 1402] Length = 442 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ED C+ C C CP L P +L + R E + Sbjct: 356 EDEVSKTAPTACIHCGRCVDVCPI-------GLIPQLLYRYAR-------TGDKENFLKV 401 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT +CP N ++ KIK + D + Sbjct: 402 HGND----CMECGCCTFTCPAKRNMTQSFKKIKKAINDDR 437 >gi|162446934|ref|YP_001620066.1| NADH oxidoreductase complex RnfABCDGE type, C subunit [Acholeplasma laidlawii PG-8A] gi|161985041|gb|ABX80690.1| NADH oxidoreductase complex RnfABCDGE type, C subunit [Acholeplasma laidlawii PG-8A] Length = 432 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ CA C SCP + P ++ A + + L L + +C Sbjct: 362 DPCIHCASCVYSCPVQ-------IQPVQIMNAVKAN-------DKDFLKAL----SVNKC 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C+ CP ++ + + K +L Sbjct: 404 IECGLCSFVCPSKIHLTDYMREGKRIL 430 >gi|315640534|ref|ZP_07895642.1| iron-sulfur cluster binding protein [Enterococcus italicus DSM 15952] gi|315483738|gb|EFU74226.1| iron-sulfur cluster binding protein [Enterococcus italicus DSM 15952] Length = 492 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 25/101 (24%) Query: 163 KIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + + +C+ C C CP Y Y GP + + Sbjct: 305 QFQEMLQCIRCGACLNVCPVYRHIGGHGYGSIYPGPMGAVLS----------------PI 348 Query: 218 LEDPFRL----YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L Y CT +CP + K + + + ++ Sbjct: 349 LGGYEEFGDLPYASSLCGACTDTCPVKIPLHKLLIEHRTVM 389 >gi|213021816|ref|ZP_03336263.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 38 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVL 60 E+ IYR+NPD P M Y ++ + M+L Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMML 35 >gi|332702610|ref|ZP_08422698.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio africanus str. Walvis Bay] gi|332552759|gb|EGJ49803.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio africanus str. Walvis Bay] Length = 542 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 13/181 (7%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++ + D + YP + K + + + Sbjct: 13 TSIDYEHLPKTGVFDTPIDFRPGTWCYPAKPEILEKLHFPNPRVWSPADVDWKLPENWKE 72 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + R L CV C C+ C Y + D P + + R + + Sbjct: 73 IVHNGFKERLEKYRSFKVFLDICVRCGACADKCHYYIGSGDPKNMPVLRAELLRSIYRND 132 Query: 208 DEFQGERLDNLEDP------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 G+ L L Y+C C+ CP G++ A+ I + LL Sbjct: 133 FTMAGKILGKLNGARVMEEDVLKEWFLYFYQCSECRRCSLYCPYGIDTAE-ITMMARELL 191 Query: 256 D 256 Sbjct: 192 Q 192 >gi|228993862|ref|ZP_04153766.1| Uncharacterized electron transport protein ykgF [Bacillus pseudomycoides DSM 12442] gi|228765918|gb|EEM14568.1| Uncharacterized electron transport protein ykgF [Bacillus pseudomycoides DSM 12442] Length = 475 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 19/95 (20%) Query: 169 ECVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ CA CP Y Y GP + L+ DE++ Sbjct: 309 QCIRCAA--NVCPIYRHIGGHAYGSIYPGPIGAV--LTPLLGGYDEYKDL---------- 354 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y CT++CP + + K + +++ Sbjct: 355 PYASSLCGACTEACPVKIPLHDLLIKHRRHIVEEA 389 >gi|146311788|ref|YP_001176862.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Enterobacter sp. 638] gi|145318664|gb|ABP60811.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Enterobacter sp. 638] Length = 1174 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEAIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPEEMENAPSSLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|323483744|ref|ZP_08089124.1| aldo/keto reductase [Clostridium symbiosum WAL-14163] gi|323402935|gb|EGA95253.1| aldo/keto reductase [Clostridium symbiosum WAL-14163] Length = 372 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 16/127 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYL 191 Q R ++K P KE E R+ ++ C C C CP + Sbjct: 252 EQMRDNISFMKDFKPLTQKERKVIEEVRKVLESCPTVPCTACGYCMEGCPESVAIYGTFQ 311 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR----CHTIMNCTQSCPKGLNPAKAI 247 I + +D + + C C CP+ ++ + Sbjct: 312 AVNIFKRY-------QDLNGAKGKYKWNTEGHGWGKASACIGCGACEAVCPQHISIRE-- 362 Query: 248 AKIKMML 254 ++K Sbjct: 363 -ELKKAA 368 >gi|291336388|gb|ADD95945.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1] Length = 941 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 45/160 (28%), Gaps = 40/160 (25%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS------------------ 157 L MSVI + S IE +PK L Sbjct: 491 LAGMSVIFSDTTNFSLESDSMGVIENPTYHANPKALDAKLTYAMFIPCLAAGAGVFVVLR 550 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + R + +C C C +CP +N+ L Sbjct: 551 NMARGYEFEMNKCYGCDLCDDACPVRLFNAGDKLNIIYNTWN------------------ 592 Query: 218 LEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + Y C T CT +CP+ +N + I+ L+ Sbjct: 593 -NEDDGVPMYSCLTCTACTNACPQLVNY-DSYVDIRRTLI 630 >gi|239906643|ref|YP_002953384.1| pyruvate-flavodoxin oxidoreductase [Desulfovibrio magneticus RS-1] gi|239796509|dbj|BAH75498.1| pyruvate-flavodoxin oxidoreductase [Desulfovibrio magneticus RS-1] Length = 1213 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 23/80 (28%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L + D+ E L L Sbjct: 682 PHWIKENCIQCNQCSYVCP--HATIRPFLADEAEMAGAPASFDTLPATGKE-LKGLAYRM 738 Query: 223 RLY--RCHTIMNCTQSCPKG 240 +++ C +C CP Sbjct: 739 QVFPMDCMGCGSCADVCPAK 758 >gi|126463107|ref|YP_001044221.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104771|gb|ABN77449.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 477 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 25/116 (21%), Gaps = 4/116 (3%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + C +CP + Sbjct: 169 WVFYFTDAPTLLVDLLTGSAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAM 228 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 I + W + R + + + L C M C CP G++ Sbjct: 229 MDEETITVAYREWRGEPRGKLKKG--EPLSPDQG--DCIDCMACVNVCPMGIDIRD 280 >gi|289191697|ref|YP_003457638.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus sp. FS406-22] gi|288938147|gb|ADC68902.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus sp. FS406-22] Length = 379 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 26/186 (13%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMS 130 R C C + + LAC + + + +++D + Sbjct: 179 GRRKNCQRCEVMVPRMADLACGNWGAEKGWTFVEICSEKGRKLVEDAEKEGYIKIKQPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCP----SYW 184 IE + ++ K K+ L++ + Y C+ C C +CP Sbjct: 239 KAIQIREKIENIMIKLAKKFQKKHLEAEYPSLEEWEKYWNRCIKCYGCRDNCPLCFCVEC 298 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 Y+ + + RL ++ C C +CP + A Sbjct: 299 RLEKDYIDEKGKIPPNPLIFQG------VRLSHIGQ-----SCINCGQCEDACPMDIPLA 347 Query: 245 KAIAKI 250 ++ Sbjct: 348 YIFHRM 353 >gi|297622709|ref|YP_003704143.1| FAD linked oxidase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297163889|gb|ADI13600.1| FAD linked oxidase domain protein [Truepera radiovictrix DSM 17093] Length = 1006 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 32/111 (28%), Gaps = 8/111 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + + + P +D + + C C T CPSY D Sbjct: 546 RYGEGYTVLPIATHFDFSKDDGFMGAIEMCTGVGACRKTTTGTMCPSYMVTRDEEHSTRG 605 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ R L + E L C C CP ++ AK Sbjct: 606 RANLLRDAMNGRLPGG---LTSQEVYNALDLCLECKACKAECPSRVDMAKL 653 >gi|258545780|ref|ZP_05706014.1| electron transport complex protein RnfC [Cardiobacterium hominis ATCC 15826] gi|258518970|gb|EEV87829.1| electron transport complex protein RnfC [Cardiobacterium hominis ATCC 15826] Length = 630 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C+ C+ +CP +L Q W S DE + RL +RLY C Sbjct: 373 SPCIRCSRCADACP-----------MELLPQQLLWYSQS-DEHK--RLKQ----YRLYDC 414 Query: 228 HTIMNCTQSCPKGLNPAK 245 C CP + + Sbjct: 415 IECGICAAVCPSAIPLVQ 432 >gi|146329069|ref|YP_001209463.1| electron transport complex protein, C subunit [Dichelobacter nodosus VCS1703A] gi|146232539|gb|ABQ13517.1| electron transport complex protein, C subunit [Dichelobacter nodosus VCS1703A] Length = 535 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 21/80 (26%), Gaps = 18/80 (22%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 EC+ C CS +CP + Y A +RL+ Sbjct: 368 PTSECIRCGRCSDACPMHLLPQQLYWYSRQQNSAALKN------------------YRLF 409 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C CP L Sbjct: 410 DCIECGICASVCPSRLPLVD 429 >gi|300692540|ref|YP_003753535.1| dehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein) [Ralstonia solanacearum PSI07] gi|299079600|emb|CBJ52278.1| Dehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein) [Ralstonia solanacearum PSI07] Length = 1341 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 951 >gi|300705189|ref|YP_003746792.1| dehydrogenase [Ralstonia solanacearum CFBP2957] gi|299072853|emb|CBJ44209.1| Dehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein) [Ralstonia solanacearum CFBP2957] Length = 1367 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 880 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 939 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 940 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 970 >gi|299067988|emb|CBJ39202.1| Dehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein) [Ralstonia solanacearum CMR15] Length = 1341 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 951 >gi|207742303|ref|YP_002258695.1| fe-s oxidoreductase fad/fmn-containing dehyfrogenase protein [Ralstonia solanacearum IPO1609] gi|206593691|emb|CAQ60618.1| fe-s oxidoreductase fad/fmn-containing dehyfrogenase protein [Ralstonia solanacearum IPO1609] Length = 1345 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 951 >gi|159116967|ref|XP_001708704.1| Pyruvate-flavodoxin oxidoreductase [Giardia lamblia ATCC 50803] gi|960283|gb|AAA74894.1| pyruvate:ferredoxin oxidoreductase [Giardia intestinalis] gi|157436817|gb|EDO81030.1| Pyruvate-flavodoxin oxidoreductase [Giardia lamblia ATCC 50803] Length = 1253 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 51/179 (28%), Gaps = 35/179 (19%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH--RSIE 140 I C + D + D + P P V ++ ++ ++ + + Sbjct: 636 SIIEQCHIEYDKARWV--NADPSESTANQTYGPEPDKYVKDIILPAVTRKFANIGTKDVM 693 Query: 141 PWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + P +K + + C+ C CS CP ++ Sbjct: 694 KYNSGKIPGGYSKYEKLGSAAKVPMWKKENCIQCGFCSVQCP------------HAAVRC 741 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLY------------------RCHTIMNCTQSCPKG 240 + D++ + E + L+ +L C C ++CPK Sbjct: 742 FVMNEDAKPDNVPEDFEMLDMKGKLAAVNSDSSKIKFRVQVSPLDCRGCGVCVEACPKD 800 >gi|17545173|ref|NP_518575.1| oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427464|emb|CAD13982.1| putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 1345 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 861 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 920 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 921 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 951 >gi|83746610|ref|ZP_00943660.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Ralstonia solanacearum UW551] gi|83726744|gb|EAP73872.1| Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Ralstonia solanacearum UW551] Length = 1364 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 880 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 939 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 940 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 970 >gi|103487157|ref|YP_616718.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] gi|98977234|gb|ABF53385.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] Length = 485 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 4/79 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + ++L+ W R E +G + P Sbjct: 207 FILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVTYKDW----RGEPRGSVKKAMAHPGAF 262 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 263 GDCIDCNQCVAVCPTGIDI 281 >gi|313672554|ref|YP_004050665.1| electron transport complex, rnfabcdge type, c subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939310|gb|ADR18502.1| electron transport complex, RnfABCDGE type, C subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 433 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 34/121 (28%), Gaps = 18/121 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 L T + K ++ ED C+ C C +CP L PA Sbjct: 322 MMGFAASSLDTPTTKGTSGVIVLREDDMPDMKKSNCIRCGRCVEACPM-------GLVPA 374 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 I+ Q E + L D + C C+ CP K + Sbjct: 375 IMEQFSL----------NEMYEKLIDWHVV-NCIECGCCSYVCPSRRPLVGYFKTAKRQV 423 Query: 255 L 255 + Sbjct: 424 M 424 >gi|308049948|ref|YP_003913514.1| electron transport complex, RnfABCDGE type, C subunit [Ferrimonas balearica DSM 9799] gi|307632138|gb|ADN76440.1| electron transport complex, RnfABCDGE type, C subunit [Ferrimonas balearica DSM 9799] Length = 895 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 27/158 (17%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G + D++ + PLP +I + M F ++ V Sbjct: 312 GNYWVRLGTDVQWLLEQTQSNPLPGQPLI--MGGPMMGF-----ALPRTDVAVVKATNCL 364 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 LL S ++ C+ C C+ CP ++L Q W + + + Sbjct: 365 LLPSLQELPPSPPARNCIRCGECAQVCPQ-----------SLLPQQLYWHSQAAEYDKAA 413 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA--IAK 249 +L+ L C C CP + IAK Sbjct: 414 QLN-------LSDCIECGACAFVCPSDIPLVHHYRIAK 444 >gi|219851424|ref|YP_002465856.1| CoB--CoM heterodisulfide reductase [Methanosphaerula palustris E1-9c] gi|219545683|gb|ACL16133.1| CoB--CoM heterodisulfide reductase [Methanosphaerula palustris E1-9c] Length = 406 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 30/100 (30%), Gaps = 8/100 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 ++ L C C C +CP I +R + +ED Sbjct: 18 QMLELDACTRCQECVDACPVVRAGYPDGAMERIAGWRRLVTPKTRILSRLTGTPIVEDGE 77 Query: 223 -----RLYRCHTIMNCTQSCPKGL---NPAKAIAKIKMML 254 L+RC + C+ C G+ ++I + Sbjct: 78 AALFSSLFRCTSCGACSVVCESGIATVPLWESIMGAGREM 117 >gi|187777028|ref|ZP_02993501.1| hypothetical protein CLOSPO_00573 [Clostridium sporogenes ATCC 15579] gi|187773956|gb|EDU37758.1| hypothetical protein CLOSPO_00573 [Clostridium sporogenes ATCC 15579] Length = 447 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 28/94 (29%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +CP S +DS L E+ L Sbjct: 369 PQASSCIRCGRCVEACPMNLIPST---------------LDSLSNRSE--LGGFEELHGL 411 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CT CP + ++I K ++ K Sbjct: 412 -DCIECGCCTFVCPAKRHLIQSIRTAKRTVIASK 444 >gi|149174196|ref|ZP_01852824.1| putative oxidase [Planctomyces maris DSM 8797] gi|148847176|gb|EDL61511.1| putative oxidase [Planctomyces maris DSM 8797] Length = 993 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 35/147 (23%), Gaps = 17/147 (11%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + D V R + + Q ++ C C C Sbjct: 524 PGKIINDDPHVT----IRNLRPVPEKFPELVELQLAWSPQELQE-----EASRCNGCGSC 574 Query: 177 ST------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 CP + D P +R L+ L + E C Sbjct: 575 RRQDAGSRMCPVFRIAPDEEASPRAKANLFRGLLSG--ALHPNELSSAETKHLADTCFNC 632 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CP +N + + K + Sbjct: 633 KQCQLDCPSTVNIPQMAIEAKAAYVSA 659 >gi|121997517|ref|YP_001002304.1| RnfABCDGE type electron transport complex subunit C [Halorhodospira halophila SL1] gi|121588922|gb|ABM61502.1| electron transport complex, RnfABCDGE type, C subunit [Halorhodospira halophila SL1] Length = 681 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 14/76 (18%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ CP L P + + R +D + + LD + RC Sbjct: 553 PCISCGRCAEVCP-------EGLQPFEMARRIRAGVDVGEAAEHIDLDPM-------RCT 598 Query: 229 TIMNCTQSCPKGLNPA 244 +C CP + A Sbjct: 599 GCSSCELVCPSSIPLA 614 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C + C + CP+GL P + +I+ Sbjct: 554 CISCGRCAEVCPEGLQPFEMARRIR 578 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 19/73 (26%), Gaps = 27/73 (36%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP D+ Q + L D C Sbjct: 108 SQCIGCTRCLPACPV----------------------DAIVGAQRQVHTVLADE-----C 140 Query: 228 HTIMNCTQSCPKG 240 C +CP Sbjct: 141 TGCRLCVDACPMD 153 >gi|292655844|ref|YP_003535741.1| FAD-linked oxidase domain-containing protein [Haloferax volcanii DS2] gi|291371121|gb|ADE03348.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] Length = 1026 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 41/155 (26%), Gaps = 24/155 (15%) Query: 120 SVIKDLVVDMSHF-----------YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 +V +DL Y ++ + L D + Sbjct: 556 NVFRDLKTAFDPDWLLNPGNICGDYDMTENLRFSPDYEFEAGFEPALNWDNDNGFEGMVE 615 Query: 169 ECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C CA C CP++ + R + D D Sbjct: 616 LCHGCAGCRGQQSTVGGVMCPTFRAAEEEIQATRGRANMLRQAMSGGLPEDEMFTDEFVD 675 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C C++ CP ++ +AK+K ++ Sbjct: 676 E-VLDLCVGCKGCSKDCPSEVD----MAKMKAEVV 705 >gi|295100968|emb|CBK98513.1| Predicted oxidoreductases of the aldo/keto reductase family [Faecalibacterium prausnitzii L2-6] Length = 383 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 43/143 (30%), Gaps = 8/143 (5%) Query: 112 AVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 V ++ V+ + + + + A ++ D + C Sbjct: 246 WVASHKNVKVVLSGMSAEDQLDDNLATFGDFRPMTDAENAA--IRQTADVLRSHIKIGCT 303 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 C C CP D + + + ++D + + D + C Sbjct: 304 GCRYCMP-CPMGVDIPDNF-----SIWNKLGMFGNKDAIRQQWTARFPDAEKAIHCVRCG 357 Query: 232 NCTQSCPKGLNPAKAIAKIKMML 254 C CP+ L ++AK++ L Sbjct: 358 KCEAVCPQHLPIRDSLAKLQTEL 380 >gi|255037827|ref|YP_003088448.1| NADH-quinone oxidoreductase, chain I [Dyadobacter fermentans DSM 18053] gi|254950583|gb|ACT95283.1| NADH-quinone oxidoreductase, chain I [Dyadobacter fermentans DSM 18053] Length = 197 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 13/115 (11%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L + + HF+S+ +I+ V H ++ +G C C C+ +CP+ Sbjct: 30 LAITIKHFFSKKVTIQY--PEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEA 87 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 + YR E+ + + L RC C ++CPK Sbjct: 88 ISMVAAERVKGEENLYR----------EEKYAAVYEVNML-RCIFCGLCEEACPK 131 >gi|156975237|ref|YP_001446144.1| electron transport complex protein RnfC [Vibrio harveyi ATCC BAA-1116] gi|156526831|gb|ABU71917.1| hypothetical protein VIBHAR_02966 [Vibrio harveyi ATCC BAA-1116] Length = 912 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 19/102 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E + C+ C+ C+ +CP+ L Q Y Sbjct: 353 PITKTANCILAPKRREIASDQYEME-CIRCSQCAEACPASLLPQQ--LQWYAKSQEY--- 406 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 E+L+ L L C C CP + + Sbjct: 407 ---------EKLEELN----LKDCIECGACAFVCPSEIPLVQ 435 >gi|301063927|ref|ZP_07204400.1| conserved domain protein [delta proteobacterium NaphS2] gi|300441973|gb|EFK06265.1| conserved domain protein [delta proteobacterium NaphS2] Length = 173 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 17/137 (12%) Query: 125 LVVDMSHFYSQHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + + + ++ E + KTV + + D C C C T CP Sbjct: 1 MRGTGWKNWKRFKNGETLGFKKTVENIADYKEIIDVIKESGGDAFKRCFQCGLCDTVCP- 59 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 WN R L++ + + ++ C T C + CP+ + Sbjct: 60 --WNRVRSFSMRKLVRQATFGF------------TEIESEEMWLCTTCGRCPRQCPRDVQ 105 Query: 243 PAKAIAKIKMMLLDRKI 259 ++ ++ + + + Sbjct: 106 QIESGVALRRVATEYGV 122 >gi|283785355|ref|YP_003365220.1| pyruvate-flavodoxin oxidoreductase [Citrobacter rodentium ICC168] gi|282948809|emb|CBG88405.1| probable pyruvate-flavodoxin oxidoreductase [Citrobacter rodentium ICC168] Length = 1174 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPQDMENAPATLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYMLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|146304084|ref|YP_001191400.1| formate dehydrogenase subunit alpha [Metallosphaera sedula DSM 5348] gi|145702334|gb|ABP95476.1| formate dehydrogenase, alpha subunit [Metallosphaera sedula DSM 5348] Length = 973 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 46/171 (26%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + ++G AC K + L + + + + Sbjct: 44 ESCDTCLVRVNGKLMRACSTRVEDGMTITTNDDKSKGARKEAISRILRYHKLYCTVCENN 103 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H ++ K + + +C++C C +C + N Sbjct: 104 NGDCVLHEAVIKEKVFHQRYVEKPYSLDNSGPFYVYDPAQCILCGRCVEACQDFAVNEVI 163 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ W ++ + + +P C C CP Sbjct: 164 WID---------WNLNP-----PRVVWDQGNPIGNSSCVNCGTCVTVCPVN 200 >gi|148656359|ref|YP_001276564.1| NADH-quinone oxidoreductase subunit I [Roseiflexus sp. RS-1] gi|148568469|gb|ABQ90614.1| NADH-quinone oxidoreductase, chain I [Roseiflexus sp. RS-1] Length = 165 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 14/118 (11%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L + + + + ++E V + H+ ++ +G+ C+ C+ C+ +C Sbjct: 5 LFKGLGTTLKYLFRKPVTVEY--PEVKRPVRERFRGRHQLKRFANGMERCIGCSLCAAAC 62 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 P+ + PA A S E ER + RC C +CP Sbjct: 63 PADAIL----VVPAENDPAA---PHSPGERYAERYEINML-----RCIFCGYCEDACP 108 >gi|55376596|ref|YP_134447.1| 4Fe-S protein [Haloarcula marismortui ATCC 43049] gi|55229321|gb|AAV44741.1| 4Fe-S protein [Haloarcula marismortui ATCC 43049] Length = 726 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 D +++ C+ C+ CS SC ++ G A + Y I + E E Sbjct: 302 RLEMRDDEQLRETLYCIRCSACSNSCANFQSVG----GHAFGGETYSGGIATGWEAGIEG 357 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 LD E L C C +CP G++ Sbjct: 358 LDVAEKFNDL--CTGCTRCVNACPVGIDI 384 >gi|291559406|emb|CBL38206.1| electron transport complex, RnfABCDGE type, C subunit [butyrate-producing bacterium SSC/2] Length = 438 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K L +D + C+ C C + CP PA L D Sbjct: 344 KTFSCFLAFTKDEVAANQPSNCIRCGRCVSVCPQKLM-------PAKLSVLA-------D 389 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Q + + L C +C+ CP N A+++ + +L + Sbjct: 390 HNQFDEFEKLYGAE----CVECGSCSFVCPAKRNLAQSMKTGRKQVLANR 435 >gi|300022223|ref|YP_003754834.1| heterodisulfide reductase subunit C [Hyphomicrobium denitrificans ATCC 51888] gi|299524044|gb|ADJ22513.1| heterodisulfide reductase subunit C [Hyphomicrobium denitrificans ATCC 51888] Length = 260 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%) Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 I + P ++ V + L +D + V P + L Sbjct: 1 MPIHEKSLIRPE-NLKVHETLAIDGIDVSGHWSTF--IETRVVPDYNENLELEIAAFPGG 57 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 ++ C C C+ +C P + R ++ + L D + Sbjct: 58 SKIHRCFQCGSCTNACTINAIEPR--FNPRYWIYLIRMGMEQ---------ELLRDKDII 106 Query: 225 YRCHTIMNCTQSCPKGLNP 243 ++C + CT CP+ + P Sbjct: 107 WQCVSCHKCTNICPRSVEP 125 >gi|167767284|ref|ZP_02439337.1| hypothetical protein CLOSS21_01803 [Clostridium sp. SS2/1] gi|167711259|gb|EDS21838.1| hypothetical protein CLOSS21_01803 [Clostridium sp. SS2/1] Length = 450 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K L +D + C+ C C + CP PA L D Sbjct: 356 KTFSCFLAFTKDEVAANQPSNCIRCGRCVSVCPQKLM-------PAKLSVLA-------D 401 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Q + + L C +C+ CP N A+++ + +L + Sbjct: 402 HNQFDEFEKLYGAE----CVECGSCSFVCPAKRNLAQSMKTGRKQVLANR 447 >gi|300788409|ref|YP_003768700.1| FAD-linked oxidase [Amycolatopsis mediterranei U32] gi|299797923|gb|ADJ48298.1| FAD-linked oxidase [Amycolatopsis mediterranei U32] Length = 989 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 28/119 (23%), Gaps = 11/119 (9%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYW 184 R W H+ + CV C CPSY Sbjct: 541 DENLRLGSTWSPAD--PQHLHFRFPHDGGSFAEAANRCVGVGRCRQHETSGGQVMCPSYQ 598 Query: 185 WNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++D D + + E L C C CP ++ Sbjct: 599 VTGEEEHSTRGRARLLFEMLDGHGDGPITDGWRSTEVREALDLCLACKGCKTDCPANVD 657 >gi|296536625|ref|ZP_06898700.1| cytochrome c oxidase accessory protein CcoG [Roseomonas cervicalis ATCC 49957] gi|296263045|gb|EFH09595.1| cytochrome c oxidase accessory protein CcoG [Roseomonas cervicalis ATCC 49957] Length = 495 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 11/80 (13%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLY 225 L C+ CP + L L+ YR W + R + + E + Sbjct: 214 LAGWAREQVCTYMCP-WPRFQAAMLDENSLVVTYRAWRGEPRGKAKAE---------GVG 263 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 264 DCVDCRACVHVCPTGIDIRD 283 >gi|258405569|ref|YP_003198311.1| aldo/keto reductase [Desulfohalobium retbaense DSM 5692] gi|257797796|gb|ACV68733.1| aldo/keto reductase [Desulfohalobium retbaense DSM 5692] Length = 383 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 10/143 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P +SV+ + + + R + E + + C C C Sbjct: 245 PEVSVVLSGMNSRAQLHENCRVADEATPGSLSTDDYERIGRVRQIYRERIQIPCTSCGYC 304 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL--EDPFRLYRCHTIMNCT 234 CPS + + R++ D+ + + N+ C C Sbjct: 305 LP-CPSGVNIPRIF-----SIMNDRFIYDA--THWSQVMYNVATNSDENAANCVQCGACE 356 Query: 235 QSCPKGLNPAKAIAKIKMMLLDR 257 + CP+ + + + L Sbjct: 357 EVCPQQIPIMAKLQECHETLAQA 379 >gi|297788852|ref|XP_002862462.1| hypothetical protein ARALYDRAFT_920688 [Arabidopsis lyrata subsp. lyrata] gi|297307992|gb|EFH38720.1| hypothetical protein ARALYDRAFT_920688 [Arabidopsis lyrata subsp. lyrata] Length = 101 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/39 (46%), Positives = 29/39 (74%), Gaps = 1/39 (2%) Query: 24 EKNLKEYRIYRWNPDNK-GNPCMDTYYVDLDNCGPMVLD 61 ++ KE++IYRWNPD P + +++VDL +CGPMV++ Sbjct: 63 KEAKKEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVIN 101 >gi|224371235|ref|YP_002605399.1| two domain fusion protein (N:Fe-S oxidoreductase-C:4Fe-4S ferredoxin) [Desulfobacterium autotrophicum HRM2] gi|223693952|gb|ACN17235.1| two domain fusion protein (N:Fe-S oxidoreductase-C:4Fe-4S ferredoxin) [Desulfobacterium autotrophicum HRM2] Length = 287 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 25/100 (25%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED------ 220 +C C C++SCP + + D + RL NL Sbjct: 29 STQCYACGICTSSCPI------------------SLVPEGLDPRRIVRLANLGGLCLDRV 70 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKI-KMMLLDRKI 259 ++ C C CP + P IA + + + + ++ Sbjct: 71 GSSIWHCLDCRRCGNLCPNSVKPWLLIANLQRRAVAEHRV 110 >gi|183222191|ref|YP_001840187.1| hypothetical protein LEPBI_I2840 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912245|ref|YP_001963800.1| oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776921|gb|ABZ95222.1| Oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780613|gb|ABZ98911.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 384 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 25/135 (18%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 +P+ + + + + ++ + +E + C+ C Sbjct: 274 IPNNMDKRYKIASFDTVFDAIQPMDVNALGYFNIYEHYSITLYEKLPVARKEFSCIDCME 333 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ CP++ + + E D +C + CT Sbjct: 334 CNHYCPTHA------------------NPFQLIKGKSEEFDK-------DKCVSCGICTV 368 Query: 236 SCPKGLNPAKAIAKI 250 CP G++ K I ++ Sbjct: 369 YCPAGIDIRKRIEEV 383 >gi|149927069|ref|ZP_01915327.1| FAD linked oxidase-like protein [Limnobacter sp. MED105] gi|149824290|gb|EDM83510.1| FAD linked oxidase-like protein [Limnobacter sp. MED105] Length = 1326 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 68/218 (31%), Gaps = 29/218 (13%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L ++ +D + + R+ I G G+ I L + Sbjct: 743 NIPVNSDDYEML---HEAEHTVDRIMQIARNLDGVISGEHGIGITKYQYLTKEELQPFQD 799 Query: 109 GAIAVYPLPHMSVIK-----DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQK 163 + P + K DL + ++ + Sbjct: 800 YKQRIDPEGRFNKGKLLPGGDLTNAYTPSFNLMGHESLIMSQSDIGSI------------ 847 Query: 164 IDGLYECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + +C+ C C C ++ + ++ L ++L++A+ + +R + + Sbjct: 848 ATSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWE 907 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ED C C CP ++ ++ +L Sbjct: 908 EFEDV--ADHCTVCHKCLTPCPVDIDFGDVSMNMRALL 943 >gi|313679593|ref|YP_004057332.1| NADH dehydrogenase subunit i [Oceanithermus profundus DSM 14977] gi|313152308|gb|ADR36159.1| NADH dehydrogenase subunit I [Oceanithermus profundus DSM 14977] Length = 176 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + H + DGL +C+ C+ C+ +CP+Y + Sbjct: 20 KPVTIPYPSAPVPLKPRFHGRHVLTRHPDGLEKCIGCSLCAAACPAYAIYVEPD------ 73 Query: 197 LQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D GER + + L RC C ++CP G Sbjct: 74 ------ENDPENPVSAGERYAKVYEINML-RCIFCGLCEEACPTG 111 >gi|317152789|ref|YP_004120837.1| hypothetical protein Daes_1075 [Desulfovibrio aespoeensis Aspo-2] gi|316943040|gb|ADU62091.1| protein of unknown function DUF162 [Desulfovibrio aespoeensis Aspo-2] Length = 717 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 13/92 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 CV C C+ CP Y +G + + + + + Sbjct: 312 RCVRCGACANVCPVYRLVGGHKMGHIYIGAIGLILTYFFHGKHAAKNL----------IQ 361 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C G++ + I I + D Sbjct: 362 NCINCEACKDICAGGIDLPRLIKAIHARIQDE 393 >gi|254291762|ref|ZP_04962548.1| RnfC-related protein [Vibrio cholerae AM-19226] gi|150422355|gb|EDN14316.1| RnfC-related protein [Vibrio cholerae AM-19226] Length = 854 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|153829524|ref|ZP_01982191.1| electron transport complex protein RnfC [Vibrio cholerae 623-39] gi|148874984|gb|EDL73119.1| electron transport complex protein RnfC [Vibrio cholerae 623-39] Length = 853 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|121535104|ref|ZP_01666921.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] gi|121306354|gb|EAX47279.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] Length = 398 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 13/78 (16%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFRLY 225 L +C+ C C+ CP + GP ++ A R+ RL + + Sbjct: 7 LDQCIACTACTVQCPVTAAA-REFAGPKMVGPALERF-----------RLFDQDIEISAD 54 Query: 226 RCHTIMNCTQSCPKGLNP 243 C NC +CP + Sbjct: 55 YCTNCKNCDITCPSSVPV 72 >gi|194336712|ref|YP_002018506.1| FAD linked oxidase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309189|gb|ACF43889.1| FAD linked oxidase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 1210 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSR 207 +L+ + + + C+ C C C Y+ + + P A L D++ Sbjct: 754 HILRRAQIAELSKKVDYCIRCGKCKMDCCVYYPSRGMFYHPRNKNLAIGSLIEALLFDAQ 813 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E + C C + CP ++ + + ++ +L Sbjct: 814 RERTTDFALLQWLEEVADHCTICHKCLKPCPVDIDSGEV-SVLEREILSE 862 >gi|315426455|dbj|BAJ48088.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Caldiarchaeum subterraneum] Length = 311 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 22/126 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW------------ 202 + E + C+ C C+ CP+ + S + +A RW Sbjct: 185 YNNLESPVYAEVAERCLACGNCTLVCPTCFCTSTDEVTDLSGEKAERWRRWDSCFNADFS 244 Query: 203 ------LIDSRDEFQGE----RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + SR + +L D F + C C CP G++ + AKI Sbjct: 245 YIHGGPIRASRLSRYRQWITHKLSTWVDQFGMLGCVGCGRCITWCPVGIDITEEAAKIMQ 304 Query: 253 MLLDRK 258 ++ Sbjct: 305 RAVEAG 310 >gi|167947207|ref|ZP_02534281.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 468 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 15/95 (15%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ D + C+ C CS CP + ++ + L D+ D F Sbjct: 111 TQWEKRNISDFIPVWEPDICIQCGNCSFVCP-HSVIRSKF-------YHEKKLADAPDSF 162 Query: 211 QGERLDNLEDPFR-------LYRCHTIMNCTQSCP 238 R+ P L C C ++CP Sbjct: 163 PSARISARGFPETRYTLQIYLEDCTGCGLCVEACP 197 >gi|197116428|ref|YP_002136855.1| heterodisulfide reductase iron-sulfur cluster-binding subunit [Geobacter bemidjiensis Bem] gi|197085788|gb|ACH37059.1| heterodisulfide reductase, iron-sulfur cluster-binding subunit, putative [Geobacter bemidjiensis Bem] Length = 314 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 20/97 (20%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP + + R + Sbjct: 195 AFWKEHFSRCIRCMACRQVCPFCYCEQC----LCDKNRPQAVENSPRPAGNTA-WHIVRA 249 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C + CP + + + Sbjct: 250 MHLAGRCGGCAECERVCPMDIPL----NLLNRRMAKE 282 >gi|227498875|ref|ZP_03929015.1| electron transport complex protein [Acidaminococcus sp. D21] gi|226904327|gb|EEH90245.1| electron transport complex protein [Acidaminococcus sp. D21] Length = 447 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 19/91 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 CV CA C +CP L P ++QA + + +E ER F + C Sbjct: 363 SPCVHCARCVDACPMK-------LEPTEIVQAVKR--QNWEEA--ER-------FSCHAC 404 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C CP + + I ++ + K Sbjct: 405 VECGSCAFVCPAHIPLVQYI-RMGKQFIRGK 434 >gi|224540475|ref|ZP_03681014.1| hypothetical protein BACCELL_05388 [Bacteroides cellulosilyticus DSM 14838] gi|224517917|gb|EEF87022.1| hypothetical protein BACCELL_05388 [Bacteroides cellulosilyticus DSM 14838] Length = 266 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 11/124 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAK----ELLQSHEDR--QKIDGLYECVMCACCSTS 179 V+ +F + + + S + + + EDR I + +C+ C C + Sbjct: 106 VIQFDNFEDIYAYMADYPMLTSEEDRQLIEKIQNMTREDRWQYWIHEMSKCIKCYACRAA 165 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP + N + E+Q R+ ++ RC C ++CP Sbjct: 166 CPLCYCNRCIVEVNCPQWIQAWSAPLTNMEWQVNRVMHMA-----GRCVECGACAKACPV 220 Query: 240 GLNP 243 G+ Sbjct: 221 GIPL 224 >gi|153800907|ref|ZP_01955493.1| RnfC-related protein [Vibrio cholerae MZO-3] gi|124123498|gb|EAY42241.1| RnfC-related protein [Vibrio cholerae MZO-3] Length = 853 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|153004302|ref|YP_001378627.1| hypothetical protein Anae109_1436 [Anaeromyxobacter sp. Fw109-5] gi|152027875|gb|ABS25643.1| protein of unknown function DUF162 [Anaeromyxobacter sp. Fw109-5] Length = 458 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 23/87 (26%), Gaps = 14/87 (16%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C C +CP + + Y P + +D R +L Sbjct: 296 FRRALHCIRCGACMNTCPVFRRSGGYSYAYTIPGPIGSVLAPSVDPRAHASLPFASSL-- 353 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAI 247 +C CP + + Sbjct: 354 ---------CGSCDDVCPVRIPLHDQL 371 >gi|121534105|ref|ZP_01665930.1| electron transport complex, RnfABCDGE type, C subunit [Thermosinus carboxydivorans Nor1] gi|121307208|gb|EAX48125.1| electron transport complex, RnfABCDGE type, C subunit [Thermosinus carboxydivorans Nor1] Length = 439 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 20/85 (23%), Gaps = 17/85 (20%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C +CP S L Y +D Sbjct: 358 NHGPERPCIRCGRCVEACPMGLVPS--MLSVLGERGLY---------------AVAKDEH 400 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C +C CP N I Sbjct: 401 DLLDCVECGSCVYVCPAKRNIVHYI 425 >gi|94496154|ref|ZP_01302732.1| putative iron-sulfur binding protein [Sphingomonas sp. SKA58] gi|94424333|gb|EAT09356.1| putative iron-sulfur binding protein [Sphingomonas sp. SKA58] Length = 464 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 22/88 (25%), Gaps = 7/88 (7%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C+ C C C + G L + D R ++ Sbjct: 303 DMLRCIRCGACMNHCVVFRQIGGHAYGGTYPGPMGAVLTPALDGLAPNR-------DLVH 355 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + CP + + + Sbjct: 356 ACTLNGKCQEVCPVRIPLPTLLKGWREK 383 >gi|86133786|ref|ZP_01052368.1| FAD linked oxidase-like protein [Polaribacter sp. MED152] gi|85820649|gb|EAQ41796.1| FAD linked oxidase-like protein [Polaribacter sp. MED152] Length = 967 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 31/111 (27%), Gaps = 9/111 (8%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + + + + +C C T CPSY D Sbjct: 535 RYEVDRKEPEIDTIQDFSDSKGILRMAEKCNGSGDCRKPVEAGGTMCPSYRATKDEKDTT 594 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R ++ + E L++ L C + C CP ++ A Sbjct: 595 RARANTLREVLTNNKEQNKFNSRELKEVLSL--CLSCKACASECPSNVDVA 643 >gi|323498950|ref|ZP_08103933.1| formate dehydrogenase, alpha subunit [Vibrio sinaloensis DSM 21326] gi|323316062|gb|EGA69090.1| formate dehydrogenase, alpha subunit [Vibrio sinaloensis DSM 21326] Length = 1402 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 5/105 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAI 195 +S + W+ + P + C+ C C +C + ++ Sbjct: 602 KSHQDWVNLRAKDPRHKFDVDRSAEFIEFDANRCISCGQCIQACSEQAVHGILNFIHDQH 661 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A R + D C C Q+CP G Sbjct: 662 GRPALRPDDRPHFGSSKNGRLLMGDS----NCVQCGACVQACPTG 702 >gi|320156874|ref|YP_004189253.1| electron transport complex protein RnfC [Vibrio vulnificus MO6-24/O] gi|319932186|gb|ADV87050.1| electron transport complex protein RnfC [Vibrio vulnificus MO6-24/O] Length = 690 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 22/117 (18%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ EC+ C C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRKEISPAGYEMECIRCGACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMMLLDR 257 + + + E L+ L C C CP + +A A+I+ + Sbjct: 402 KAEEFDKCEELN-------LKDCIECGACAFVCPSEIPLVSYYRQAKAEIRTRAQEA 451 >gi|291534916|emb|CBL08028.1| Predicted oxidoreductases of the aldo/keto reductase family [Roseburia intestinalis M50/1] Length = 380 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 11/211 (5%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT---LA 99 P M+ + ++ + ++ + E + G N+ G A Sbjct: 166 PEMEFVQLQINYYDWESENVQSRKCYEVAEKHGVPVIVMEPVKGGTLANMVGEPARILSA 225 Query: 100 CVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 ++ A+ LP++ ++ + D+ ++ + + Sbjct: 226 LDENASYASYAVRYAASLPNVILVLSGMSDLKQLQDNTAYMKDFQPLTDKEQQAIGKVVE 285 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + C C C CP D + + D +G + Sbjct: 286 E--LEKLPTIPCTNCRYCVEGCPKKIRIPDIF-----GVYNMGVQFGVTDAARGSYRWQI 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + C C CP+ L K + + Sbjct: 339 DGSGKAGDCIKCGKCEAQCPQHLEIRKLLEE 369 >gi|283833001|ref|ZP_06352742.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Citrobacter youngae ATCC 29220] gi|291071613|gb|EFE09722.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Citrobacter youngae ATCC 29220] Length = 1174 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPEAMESAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|62289351|ref|YP_221144.1| iron-sulfur cluster-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82699276|ref|YP_413850.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|189023604|ref|YP_001934372.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus S19] gi|237814838|ref|ZP_04593836.1| cytochrome c oxidase accessory protein CcoG [Brucella abortus str. 2308 A] gi|254688666|ref|ZP_05151920.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus bv. 6 str. 870] gi|254693149|ref|ZP_05154977.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus bv. 3 str. Tulya] gi|254696792|ref|ZP_05158620.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729700|ref|ZP_05188278.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus bv. 4 str. 292] gi|256256913|ref|ZP_05462449.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus bv. 9 str. C68] gi|260545896|ref|ZP_05821637.1| 4Fe-4S ferredoxin [Brucella abortus NCTC 8038] gi|260754143|ref|ZP_05866491.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 6 str. 870] gi|260757363|ref|ZP_05869711.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 4 str. 292] gi|260761187|ref|ZP_05873530.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 2 str. 86/8/59] gi|260883168|ref|ZP_05894782.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 9 str. C68] gi|261213389|ref|ZP_05927670.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 3 str. Tulya] gi|297247765|ref|ZP_06931483.1| cytochrome c oxidase accessory protein CcoG [Brucella abortus bv. 5 str. B3196] gi|62195483|gb|AAX73783.1| iron-sulfur cluster-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82615377|emb|CAJ10344.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Brucella melitensis biovar Abortus 2308] gi|189019176|gb|ACD71898.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Brucella abortus S19] gi|237789675|gb|EEP63885.1| cytochrome c oxidase accessory protein CcoG [Brucella abortus str. 2308 A] gi|260097303|gb|EEW81178.1| 4Fe-4S ferredoxin [Brucella abortus NCTC 8038] gi|260667681|gb|EEX54621.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 4 str. 292] gi|260671619|gb|EEX58440.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 2 str. 86/8/59] gi|260674251|gb|EEX61072.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 6 str. 870] gi|260872696|gb|EEX79765.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 9 str. C68] gi|260914996|gb|EEX81857.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella abortus bv. 3 str. Tulya] gi|297174934|gb|EFH34281.1| cytochrome c oxidase accessory protein CcoG [Brucella abortus bv. 5 str. B3196] Length = 516 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLIREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|301026785|ref|ZP_07190189.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 69-1] gi|300395323|gb|EFJ78861.1| electron transport complex, RnfABCDGE type, C subunit [Escherichia coli MS 69-1] Length = 804 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 26/99 (26%), Gaps = 28/99 (28%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ +CP+ Y D+ + C Sbjct: 377 CIRCSACADACPADLLPQQLYWFSKG---------QQHDKATT---------HNIADCIE 418 Query: 230 IMNCTQSCPKGLNPAK----------AIAKIKMMLLDRK 258 C CP + + AI + + + K Sbjct: 419 CGACAWVCPSNIPLVQYFRQEKAEIAAIHQEEKRAAEAK 457 >gi|256423710|ref|YP_003124363.1| D-lactate dehydrogenase (cytochrome) [Chitinophaga pinensis DSM 2588] gi|256038618|gb|ACU62162.1| D-lactate dehydrogenase (cytochrome) [Chitinophaga pinensis DSM 2588] Length = 976 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 32/214 (14%) Query: 63 LLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL---PHM 119 + + L R I + N + + + + Sbjct: 449 PIINLKTEEGNLLFR-----KIAEEIATLVKKYNGSLSGEHGDGRLRGEFIRQMIGDKNY 503 Query: 120 SVIKDLVVDMSH--FYSQHRSIEPWL-------KTVSPKPAKELLQSHEDRQKIDGLYEC 170 ++++DL ++ ++ ++ P + + ++ + +C Sbjct: 504 TLLRDLKYTWDPENIFNPNKIVDTPSMNSMLRYTPGQKAPELKTIFHFPEQTILQHAEQC 563 Query: 171 VMCACCS-------TSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPF 222 C T CPSY + R +L +S + R D+ E Sbjct: 564 NGSGDCRKTEKSGGTMCPSYMATRNEKDTTRARANILREFLTNS---TKENRFDHKEIYE 620 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C C CP ++ +AK+KM L Sbjct: 621 VLDLCLACKGCKSECPSNVD----MAKLKMEFLQ 650 >gi|253698683|ref|YP_003019872.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251773533|gb|ACT16114.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 314 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 20/97 (20%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP + + R + Sbjct: 195 AFWKEHFSRCIRCMACRQVCPFCYCEQC----LCDKNRPQAVENSPRPAGNTA-WHIVRA 249 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C + CP + + + Sbjct: 250 MHLAGRCGGCAECERVCPMDIPL----NLLNRRMARE 282 >gi|12642421|gb|AAK00236.1|AF250349_1 heterodisulfide reductase subunit C [Carboxydothermus hydrogenoformans] Length = 178 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 14/99 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +++ L +C C C+ CP + P ++ S+ E L Sbjct: 19 EKESGQHLRDCYQCGKCTAGCPVAYAMDYT---PNQIMHL------SKIGIGEEVLR--- 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C CPK ++ A+ + ++ ++ RK Sbjct: 67 -SRTIWICASCNTCYDRCPKNIDIARVMDSLR-IIARRK 103 >gi|315281896|ref|ZP_07870421.1| PduS type ferredoxin, putative [Listeria marthii FSL S4-120] gi|313614458|gb|EFR88077.1| PduS type ferredoxin, putative [Listeria marthii FSL S4-120] Length = 369 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 9/114 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C+ CS CP D + P +++ + D Sbjct: 236 EDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHD--IHPHKVMRHFAVAED 293 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRK 258 D + C C +CP GL+P + +K LL + Sbjct: 294 ISDIKPDPIWEEAMI------CCECGICEVIACPMGLSPRQVNIHVKKELLKQG 341 >gi|299137133|ref|ZP_07030315.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] gi|298600538|gb|EFI56694.1| D-lactate dehydrogenase (cytochrome) [Acidobacterium sp. MP5ACTX8] Length = 984 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 5/118 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + ++ L H + + C+ C C + CPS + P Sbjct: 536 KLMLSPDVMLTRDTKAHLRHLHTVPTVEEEVDRCIECGYCESVCPSRHITTT----PRQR 591 Query: 197 LQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R L E L + + C +C +CP G+N + + + Sbjct: 592 IVLRREMLRQPVGSIVTEALMKQYEYDAIETCAGDGSCALACPVGINTGMLMKRFRHE 649 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Query: 203 LIDSRDEFQGERLDNLED----PFRLYRCHTIMNCTQSCP-KGL--NPAKAIAKIKMMLL 255 ++ +RD L +L + RC C CP + + P + I ++ +L Sbjct: 543 VMLTRD--TKAHLRHLHTVPTVEEEVDRCIECGYCESVCPSRHITTTPRQRIV-LRREML 599 Query: 256 DRKI 259 + + Sbjct: 600 RQPV 603 >gi|320354155|ref|YP_004195494.1| NADH dehydrogenase subunit I [Desulfobulbus propionicus DSM 2032] gi|320122657|gb|ADW18203.1| NADH dehydrogenase subunit I [Desulfobulbus propionicus DSM 2032] Length = 174 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 20/147 (13%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY----SQHRSIEPWLKTVSPKPAKE 153 ++ + + KG L + V K + V HF + P+ Sbjct: 1 MSGKTKIMERKGKDLYERLYLVEVFKGMAVTFGHFISNFLDNSKLYVRHYPEQKPEITAR 60 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 H + DG +CV C C T+CP+ + D R E Sbjct: 61 WRGRHRLTKHEDGTMKCVACFMCQTNCPAKCIMIEAGERV-----------DGRTEKMPV 109 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R D L C C ++CP Sbjct: 110 RFDI-----DLLECIYCGYCVEACPMD 131 >gi|169828796|ref|YP_001698954.1| formate dehydrogenase subunit alpha [Lysinibacillus sphaericus C3-41] gi|168993284|gb|ACA40824.1| Formate dehydrogenase alpha chain [Lysinibacillus sphaericus C3-41] Length = 978 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 45/161 (27%), Gaps = 19/161 (11%) Query: 83 GICGSCGMN-IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + SC +DG N L K + L + + + + + + H + E Sbjct: 55 QLVRSCSTKAVDGMNVLLTSDKAKTAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEL 114 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILL 197 P K ++ HE C+ C C C S N L Sbjct: 115 MEIEHQKYPYKPKVEPHEVDMSHPFYRYDPNQCIACGQCVEVCQSLQVNETLSLDWEAER 174 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D+ + D C + C CP Sbjct: 175 P--RVIWDTGV--------AINDS----SCVSCGQCVTVCP 201 >gi|11498153|ref|NP_069379.1| hypothetical protein AF0543 [Archaeoglobus fulgidus DSM 4304] gi|2650081|gb|AAB90695.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 538 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 27/109 (24%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDR------------------YLGPAILLQAYRWLID 205 + L C C CS +CP + + + YL P L D Sbjct: 106 MLSLEYCARCQTCSEACPIFVSSGRKEIYRPTYRSEVLRRIIKRYLQPTGGLLGKFTGAD 165 Query: 206 -SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAKI 250 + RL L YRC CTQ+CP G++ + I K+ Sbjct: 166 IELNALTVTRLAELA-----YRCTLCRRCTQTCPLGIDNGLITREIRKL 209 >gi|302873897|ref|YP_003842530.1| sulfite reductase, subunit A [Clostridium cellulovorans 743B] gi|307689856|ref|ZP_07632302.1| anaerobic sulfite reductase subunit A [Clostridium cellulovorans 743B] gi|302576754|gb|ADL50766.1| sulfite reductase, subunit A [Clostridium cellulovorans 743B] Length = 339 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 62/214 (28%), Gaps = 35/214 (16%) Query: 68 NKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV---YPLPHMSVIKD 124 + + + C M + T A K+ + +I + + Sbjct: 124 REKTKFVLMECENSFENCFCVSMGTNKTEDYAFFVRHKENQVSIKLQDEEFENFFKAEEV 183 Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V+ S+ S ++ + + + C+ C C+ C + Sbjct: 184 LEVEPSYVDSNDTVVKIPENLDQ--------RVFKATMWKEYSARCIACGRCNMVCGTCA 235 Query: 185 ---------------------WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--- 220 W S G + + + +D + + + + + D Sbjct: 236 CFTMQDIFYKDNPKSGERRRVWASCHVDGFTSMAGGHSFRLDKGERMRFKVMHKVYDYKK 295 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 F + C C CP+ ++ A ++ K+ + Sbjct: 296 RFGYHMCTGCGRCDDVCPEYISFANSVNKLNDAM 329 >gi|153824972|ref|ZP_01977639.1| RnfC-related protein [Vibrio cholerae MZO-2] gi|149741484|gb|EDM55514.1| RnfC-related protein [Vibrio cholerae MZO-2] Length = 853 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|53802984|ref|YP_115216.1| electron transport complex subunit C [Methylococcus capsulatus str. Bath] gi|53756745|gb|AAU91036.1| electron transport complex, C subunit [Methylococcus capsulatus str. Bath] Length = 495 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 18/92 (19%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ CA C ++CP+ L ++A + L++ + L Sbjct: 375 DAKACIRCARCVSACPAGLLP----LEMVARIRAGQ-------------LESAIG-YGLK 416 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C + +C+ CP + L+ R Sbjct: 417 DCISCGSCSYVCPSEIPLVHYFKYASGELVAR 448 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL P + +A+I+ L+ I Sbjct: 378 ACIRCARCVSACPAGLLPLEMVARIRAGQLESAI 411 >gi|116670315|ref|YP_831248.1| FAD linked oxidase domain-containing protein [Arthrobacter sp. FB24] gi|116610424|gb|ABK03148.1| FAD linked oxidase domain protein [Arthrobacter sp. FB24] Length = 1028 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 8/87 (9%) Query: 162 QKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-GERL 215 + L C+ C T CPSY D + + ++ R E Sbjct: 589 PWVHALQSCIGVGRCRTDSGGVMCPSYRATKDEKDSTRGRSRVLQDMV--RGARTVEEGW 646 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + E L C + C+ CP G++ Sbjct: 647 KSEEVREALDLCLSCKACSSDCPTGVD 673 >gi|320526975|ref|ZP_08028164.1| electron transport complex, RnfABCDGE type, C subunit [Solobacterium moorei F0204] gi|320132560|gb|EFW25101.1| electron transport complex, RnfABCDGE type, C subunit [Solobacterium moorei F0204] Length = 442 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 19/122 (15%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + + + + + C+ C C+ +CPS L P + Sbjct: 334 MMGRAVPNDQFVVMAQNNGLTIQKYEKPDTVACLRCGRCTETCPS-------GLQPVRIA 386 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ S D RLD + C CT CP + + + + K + Sbjct: 387 SEHK----SVDYDTLMRLDVMN-------CIECGLCTYVCPSKIEVTENVRRAK-TFVRA 434 Query: 258 KI 259 K+ Sbjct: 435 KL 436 >gi|313638342|gb|EFS03561.1| PduS type ferredoxin, putative [Listeria seeligeri FSL S4-171] Length = 455 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 17/120 (14%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +L ++ + C+ C C+ CP D + P +++ + Sbjct: 235 TEDTGYLHKLHYQTVEQIFNETKSACIQCTLCTDLCPRKQLGHD--IHPHKVMRHF---- 288 Query: 205 DSRDEFQGERLDNLEDPFRLYR----CHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 E + ++D ++ C C +CP GL+P + +K LL + I Sbjct: 289 -----AVAEDISAIKDDP-IWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGI 342 >gi|315302648|ref|ZP_07873447.1| PduS type ferredoxin, putative [Listeria ivanovii FSL F6-596] gi|313628976|gb|EFR97310.1| PduS type ferredoxin, putative [Listeria ivanovii FSL F6-596] Length = 396 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +L ++ + C+ C C+ CP D + P +++ + Sbjct: 177 EDTGYLHKLHYQTVEQIFNETKSACIQCTLCTDLCPRKQLGHD--IHPHKVMRHF----- 229 Query: 206 SRDEFQGERLDNLEDPFRLYR----CHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 E + ++D ++ C C +CP GL+P + +K LL + I Sbjct: 230 ----AVAEDISAIKDDP-IWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGI 283 >gi|261856542|ref|YP_003263825.1| NADH-quinone oxidoreductase, chain I [Halothiobacillus neapolitanus c2] gi|261837011|gb|ACX96778.1| NADH-quinone oxidoreductase, chain I [Halothiobacillus neapolitanus c2] Length = 162 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 25/127 (19%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V +F+ + +++ + H R+ +G C+ C C CP+ Sbjct: 20 LSVTGKYFFGRKFTVQY--PEEKTPMSPRFRGLHALRRYANGEERCIACKLCEAVCPALA 77 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + + R+ ID L++C C ++CP Sbjct: 78 ITIESEQRADGTRRTTRYDID------------------LFKCIYCGFCEEACPV----- 114 Query: 245 KAIAKIK 251 +I + + Sbjct: 115 DSIVETR 121 >gi|262089644|gb|ACY24741.1| iron-sulfur binding protein [uncultured organism] Length = 466 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ D+R + E L C C Q Sbjct: 219 CLHMCPYARFQSVMFDRDTLVISYDAARGDARGSRKKEDTPK---DLGLGDCIDCYMCVQ 275 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 276 VCPTGIDIRD 285 >gi|288559592|ref|YP_003423078.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter ruminantium M1] gi|288542302|gb|ADC46186.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter ruminantium M1] Length = 402 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 20/101 (19%) Query: 161 RQKIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C+ C C +CP ++ P A + +R Sbjct: 286 AEYKEEFSKCMKCYGCREACPLCFCDDCCLEAEGPEWV-PGGYTPAAPFFHLTRMV---- 340 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C++ CP + +K A + + Sbjct: 341 --------HMVDACTNCGQCSEVCPCEIPVSKVWATVNQKV 373 >gi|330835350|ref|YP_004410078.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567489|gb|AEB95594.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 749 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 17/91 (18%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C SC +Y D P RL + + C Sbjct: 312 KCVNCGKCLDSCLAYNLTRDFARSPPGKFS---------------RL--VTEETAFEPCF 354 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 MNC ++CP G+ + + + +RK+ Sbjct: 355 GCMNCQEACPVGVQISSITEALPRINENRKV 385 >gi|210615656|ref|ZP_03290702.1| hypothetical protein CLONEX_02920 [Clostridium nexile DSM 1787] gi|210150199|gb|EEA81208.1| hypothetical protein CLONEX_02920 [Clostridium nexile DSM 1787] Length = 446 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 18/100 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D + C+ C C CPS S L D + E Sbjct: 362 KDEVAANEPSACINCGRCVEVCPSRIIPSR--------------LADFAEHHNEEAFTKW 407 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E C +C+ CP +AI ++ + L + Sbjct: 408 EGLE----CVECGSCSYVCPAKRQLKQAIGSMRKIALANR 443 >gi|254476176|ref|ZP_05089562.1| formate dehydrogenase, alpha subunit [Ruegeria sp. R11] gi|214030419|gb|EEB71254.1| formate dehydrogenase, alpha subunit [Ruegeria sp. R11] Length = 924 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 48/178 (26%), Gaps = 36/178 (20%) Query: 82 EGICGSCGMNIDGTNTLACVK------------------DMKDIKGAIAVYPLPHMSVIK 123 +G C +C + I+G TLA + + + + V P + Sbjct: 47 DGNCRACMVEIEGERTLAASCIREPAEGMVVTTNNARAENARKMVMELLVADQPKREEAR 106 Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPS 182 D SH + + + L C+ C C +C Sbjct: 107 D---KSSHLWDMAELNGVSESRFPKLEKDRIPLLDDSHVAMKVNLDACISCNLCVRACRE 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D + DP C C Q+CP G Sbjct: 164 VQVND--VIGMAGRGHDAYPVFD------------IADPMGQSSCVACGECVQACPTG 207 >gi|167043115|gb|ABZ07825.1| putative FAD-linked oxidase, C-terminal domain protein [uncultured marine microorganism HF4000_ANIW141I9] Length = 928 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 5/83 (6%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCH 228 CV C C + CPS + P + R + + R + E L + C Sbjct: 533 CVECGFCESVCPSRNLT----MTPRQRIIISREMRLPGRTPAELEELRKDFNYSGNETCA 588 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 T C CP ++ I ++ Sbjct: 589 TDGLCELECPVNIDTGSFIKSLR 611 >gi|148643522|ref|YP_001274035.1| formate dehydrogenase, beta subunit, FdhB [Methanobrevibacter smithii ATCC 35061] gi|148552539|gb|ABQ87667.1| formate dehydrogenase, beta subunit, FdhB [Methanobrevibacter smithii ATCC 35061] Length = 382 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 14/186 (7%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSV----IKDLVVDMSHFYS 134 R C C + + +AC +D I + + + ++ Sbjct: 181 GRRHNCQRCDLKVPRNADIACGNWGAEDGWTFIEINSEKGAKIVNQAKAEGYIEGKTPSE 240 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY---ECVMCACCSTSCPSYWWNSDRYL 191 + I ++ + K ++ S D G C+ C C CP W N L Sbjct: 241 KAIGIRSKIENLMTKMGEKEKTSLLDEDISIGSDEWNRCIQCYACRDICPICWCNECE-L 299 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + S FQG RL ++ + C C CP + K KI+ Sbjct: 300 EKSYFENENENCPPSAISFQGVRLSHMA-----FSCVNCGQCGDVCPMEIPVDKLFDKIQ 354 Query: 252 MMLLDR 257 +R Sbjct: 355 RKYKNR 360 >gi|134100178|ref|YP_001105839.1| FAD linked oxidase-like [Saccharopolyspora erythraea NRRL 2338] gi|291006603|ref|ZP_06564576.1| FAD linked oxidase-like protein [Saccharopolyspora erythraea NRRL 2338] gi|133912801|emb|CAM02914.1| FAD linked oxidase-like [Saccharopolyspora erythraea NRRL 2338] Length = 982 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 21/88 (23%), Gaps = 13/88 (14%) Query: 163 KIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQA---YRWLIDSRDEFQGER 214 C+ C S CPSY A D ER Sbjct: 564 MRAAADRCMNIGACRKSTSGVMCPSYIATRSEEHSTRGRANALVKALSEPDPHAALGDER 623 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 L + D C C CP ++ Sbjct: 624 LHGILD-----LCLMCKACKSECPMSVD 646 >gi|327483731|gb|AEA78138.1| Electron transport complex protein RnfC [Vibrio cholerae LMA3894-4] Length = 770 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|325265819|ref|ZP_08132505.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Kingella denitrificans ATCC 33394] gi|324982457|gb|EGC18083.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Kingella denitrificans ATCC 33394] Length = 1280 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 65/215 (30%), Gaps = 19/215 (8%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + +++ +L +I + + RS I G G+ I L + Sbjct: 704 NIPVNSDDYEMLQTAHQAVARI---MRIARSLNGVISGEHGIGITKLEFLTDEEMQPFWD 760 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 + P + K M +H + E + + + Sbjct: 761 YKAKIDPQSRFNRHK----LMRGADLRHAYTPSFELLGFESLIMEQSHLGK---ITEAVK 813 Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ LG +L +A+ + +R + D L Sbjct: 814 DCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLAEAFLYEEQTRRGVSLKHFDELGSI 873 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C C + CP ++ I L + Sbjct: 874 AE--HCTVCHRCVKPCPVNIDFGDVSVDINNFLRE 906 >gi|297578621|ref|ZP_06940549.1| electron transport complex protein RnfC [Vibrio cholerae RC385] gi|297536215|gb|EFH75048.1| electron transport complex protein RnfC [Vibrio cholerae RC385] Length = 862 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|294788408|ref|ZP_06753651.1| cytochrome c oxidase accessory protein CcoG [Simonsiella muelleri ATCC 29453] gi|294483839|gb|EFG31523.1| cytochrome c oxidase accessory protein CcoG [Simonsiella muelleri ATCC 29453] Length = 476 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP Y L+ +Y R E +G R N+ Sbjct: 206 WLFGHIMRGQVCFYMCP-YARFQSAMFDHDTLVISYDTE---RGEPRGARKKNVSREETP 261 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 262 LGDCINCTMCVQVCPTGIDIRDGLQY 287 >gi|257453672|ref|ZP_05618960.1| cytochrome c oxidase accessory protein CcoG [Enhydrobacter aerosaccus SK60] gi|257448950|gb|EEV23905.1| cytochrome c oxidase accessory protein CcoG [Enhydrobacter aerosaccus SK60] Length = 474 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 35/133 (26%), Gaps = 7/133 (5%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + L V + Y + + + Y Sbjct: 164 IMALVTALTFSSYAVGTDYLYHSWQWFGGIPVPDWTPLTWVSVLIFTFATFANAGYMREH 223 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C+ CP Y L+ Y + R E +G R ED L C + Sbjct: 224 --FCTHICP-YGRFQSVMFDKDTLIVTYDY---KRGEPRGARKRGGEDEN-LGDCINCLM 276 Query: 233 CTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 277 CVQVCPTGIDIRD 289 >gi|120601356|ref|YP_965756.1| FAD linked oxidase domain-containing protein [Desulfovibrio vulgaris DP4] gi|120561585|gb|ABM27329.1| FAD linked oxidase domain protein [Desulfovibrio vulgaris DP4] Length = 1187 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 27/100 (27%), Gaps = 17/100 (17%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQA---------YRWLIDSRDEFQ--GERLDNL 218 C C C CP ++ P A Y + R + E + Sbjct: 728 CTRCGKCKQVCPMHYPEQSLQHYPRNKNIALGALIEAVYYSQVNKGRPDPLLLTEVRTMM 787 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E C C CP +N + ++ + + Sbjct: 788 E------HCTGCGKCAAVCPVKINSGEVALALRAFVEEEG 821 >gi|46581474|ref|YP_012282.1| oxidoreductase [Desulfovibrio vulgaris str. Hildenborough] gi|46450896|gb|AAS97542.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235126|gb|ADP87980.1| FAD linked oxidase domain protein [Desulfovibrio vulgaris RCH1] Length = 1187 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 27/100 (27%), Gaps = 17/100 (17%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQA---------YRWLIDSRDEFQ--GERLDNL 218 C C C CP ++ P A Y + R + E + Sbjct: 728 CTRCGKCKQVCPMHYPEQSLQHYPRNKNIALGALIEAVYYSQVNKGRPDPLLLTEVRTMM 787 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E C C CP +N + ++ + + Sbjct: 788 E------HCTGCGKCAAVCPVKINSGEVALALRAFVEEEG 821 >gi|320007207|gb|ADW02057.1| iron-sulfur cluster binding protein [Streptomyces flavogriseus ATCC 33331] Length = 514 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + DP Y Sbjct: 329 NCIRCSACLNVCPVYERAGGHAYGSTYPGPIGAVLTPQLAGMHAAK----NDPNSSLPYA 384 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 385 SSLCGACFDACPVKIDIPSMLVELRHQ 411 >gi|326203997|ref|ZP_08193858.1| aldo/keto reductase [Clostridium papyrosolvens DSM 2782] gi|325985764|gb|EGD46599.1| aldo/keto reductase [Clostridium papyrosolvens DSM 2782] Length = 368 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 33/125 (26%), Gaps = 7/125 (5%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + ++ + + ++ L C C C+ CP Sbjct: 245 MSSLEQMQDNISFMKEFEPLSEKELEAV--SKVQEILHNMNLIPCTACRYCTDGCPKNIS 302 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D + + W D + E C C ++CP+ + Sbjct: 303 IPDLFACMNTKNMYHDWNA---DYYYSEVHTKNNGKAS--DCIKCGKCEKACPQHIQIGD 357 Query: 246 AIAKI 250 + ++ Sbjct: 358 LLVQV 362 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 10/25 (40%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C CT CPK ++ A + Sbjct: 287 CTACRYCTDGCPKNISIPDLFACMN 311 >gi|291613328|ref|YP_003523485.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] gi|291583440|gb|ADE11098.1| electron transport complex, RnfABCDGE type, C subunit [Sideroxydans lithotrophicus ES-1] Length = 492 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 24/92 (26%), Gaps = 22/92 (23%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP--FR 223 C+ C+ C +CP + R+ +L F Sbjct: 363 EASPCIRCSTCVRACPVGLL--------------------PLEMASRIRVSDLAGAVAFG 402 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C +C+ CP + K L Sbjct: 403 LKDCIACGSCSYVCPAHIPLVHYFNYAKGDLA 434 >gi|332298988|ref|YP_004440910.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Treponema brennaborense DSM 12168] gi|332182091|gb|AEE17779.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Treponema brennaborense DSM 12168] Length = 1186 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 33/118 (27%), Gaps = 18/118 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLI 204 + ++ ++ C+ C C+ CP + + L A A Sbjct: 674 PTATTQFEKRAIAEKVPEWDPSVCIQCGQCTVVCP-HAVIRMKTLSDDAAAKAPAGFKSA 732 Query: 205 D--SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP---------KGLNPAKAIAKIK 251 D + E + + + C C CP K +N +++ Sbjct: 733 DLKPKAEAGKKVVLQISTED----CTGCGLCVAVCPAKNKADETKKAINLVHFTEELR 786 >gi|328907019|gb|EGG26785.1| putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing protein [Propionibacterium sp. P08] Length = 745 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 7/91 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 + + CV C C CPS D L P + R + ++ DE L+ Sbjct: 539 QEEVDRCVECGYCEPVCPSR----DLTLTPRQRIVIQRAIAQAQADGDEELATDLEEHAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C +CP +N + +++ Sbjct: 595 YSVVQTCAVDGMCQTNCPLHINTGDLVRRLR 625 >gi|314929358|gb|EFS93189.1| FAD linked oxidase protein [Propionibacterium acnes HL044PA1] Length = 745 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 7/91 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 + + CV C C CPS D L P + R + ++ DE L+ Sbjct: 539 QEEVDRCVECGYCEPVCPSR----DLTLTPRQRIVIQRAIAQAQADGDEELATDLEEHAT 594 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C +CP +N + +++ Sbjct: 595 YSVVQTCAVDGMCQTNCPLHINTGDLVRRLR 625 >gi|262191542|ref|ZP_06049725.1| electron transport complex protein RnfC [Vibrio cholerae CT 5369-93] gi|262032596|gb|EEY51151.1| electron transport complex protein RnfC [Vibrio cholerae CT 5369-93] Length = 814 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 378 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 419 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 420 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 449 >gi|242399495|ref|YP_002994920.1| NiFe hydrogenase II, subunit beta [Thermococcus sibiricus MM 739] gi|242265889|gb|ACS90571.1| NiFe hydrogenase II, subunit beta [Thermococcus sibiricus MM 739] Length = 337 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 20/112 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRW---------LIDSRDEFQ 211 C+ C C+ CP+ D ++ ++ R+ L+ F+ Sbjct: 225 WKKYERICLGCGNCNMVCPTCRCYEVCDLWVNAYEAVRVRRYDSCFMETHGLVAGGHNFR 284 Query: 212 GERLD---------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RLD N DP + C C + CP + K + +++ L Sbjct: 285 ATRLDRFRHRYYCKNYFDPESGFNCVGCGRCDEFCPAKIEHVKVLDEVREGL 336 >gi|226306887|ref|YP_002766847.1| NiFe hydrogenase beta subunit [Rhodococcus erythropolis PR4] gi|226186004|dbj|BAH34108.1| putative NiFe hydrogenase beta subunit [Rhodococcus erythropolis PR4] Length = 369 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 32/124 (25%), Gaps = 22/124 (17%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + L + + D C+ C C+ CP+ + + + RW Sbjct: 224 RQMPDVDLRGMLRDARDADVWADVASRCLTCGNCTMVCPTCFCTTTEDVSDLAGDNVERW 283 Query: 203 --------LIDSRDEFQGER--------------LDNLEDPFRLYRCHTIMNCTQSCPKG 240 L S+ R L D F C C CP G Sbjct: 284 QHWSSCFDLDYSQLHGGAVRVSGESRYRQWISHKLGTWHDQFGSSGCVGCGRCIDWCPVG 343 Query: 241 LNPA 244 ++ Sbjct: 344 IDIT 347 >gi|89096782|ref|ZP_01169674.1| formate dehydrogenase chain A [Bacillus sp. NRRL B-14911] gi|89088797|gb|EAR67906.1| formate dehydrogenase chain A [Bacillus sp. NRRL B-14911] Length = 990 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 40/171 (23%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C ++G AC K + L + + + + Sbjct: 46 QSCDTCMCEVNGNLMRACSTVVEDGMDIATSSEIAKGAQEEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIEPW--LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E P +K +C++C C +C N Sbjct: 106 NGNCRVHNTAEMMGIEHQTRPHRSKGYEVDMSHPFYRYDPDQCILCGRCVETCQDLQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D C + C CP Sbjct: 166 TLTIDWETGQP--RVLWDGGKSINES------------SCVSCGQCVSVCP 202 >gi|313837431|gb|EFS75145.1| FAD linked oxidase protein [Propionibacterium acnes HL037PA2] gi|314971638|gb|EFT15736.1| FAD linked oxidase protein [Propionibacterium acnes HL037PA3] Length = 654 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 7/91 (7%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLED 220 + + CV C C CPS D L P + R + ++ DE L+ Sbjct: 448 QEEVDRCVECGYCEPVCPSR----DLTLTPRQRIVIQRAIAQAQADGDEELATDLEEHAT 503 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C C +CP +N + +++ Sbjct: 504 YSVVQTCAVDGMCQTNCPLHINTGDLVRRLR 534 >gi|260598065|ref|YP_003210636.1| putative pyruvate-flavodoxin oxidoreductase [Cronobacter turicensis z3032] gi|260217242|emb|CBA31152.1| Probable pyruvate-flavodoxin oxidoreductase [Cronobacter turicensis z3032] Length = 1173 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDS 206 + ++ + I C C C +CP + + + P L A + S Sbjct: 670 TQWEKRNIAEAIPIWKEELCTQCNHCVAACP-HSAIRAKVVAPEALADAPGSLAALDVKS 728 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM 253 RD + + + C C + CP KAI + + Sbjct: 729 RDMRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRL 774 >gi|255028983|ref|ZP_05300934.1| hypothetical protein LmonL_07101 [Listeria monocytogenes LO28] Length = 608 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|291295204|ref|YP_003506602.1| iron-sulfur cluster binding protein [Meiothermus ruber DSM 1279] gi|290470163|gb|ADD27582.1| iron-sulfur cluster binding protein [Meiothermus ruber DSM 1279] Length = 464 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 28/96 (29%), Gaps = 9/96 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV CA C +CP Y G L L LE+ L Sbjct: 306 WETLRCVRCAACLNACPVYRQTGGHAYGYVYSGPIGAILSPG--------LVGLEETKPL 357 Query: 225 -YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C Q+CP + K + + + + Sbjct: 358 PYASSLCGACFQACPVRIPIPKLLLTWRNRAVAEGL 393 >gi|126652326|ref|ZP_01724502.1| hypothetical protein BB14905_00250 [Bacillus sp. B14905] gi|126590901|gb|EAZ85014.1| hypothetical protein BB14905_00250 [Bacillus sp. B14905] Length = 978 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 45/161 (27%), Gaps = 19/161 (11%) Query: 83 GICGSCGMN-IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + SC +DG N L K + L + + + + + + H + E Sbjct: 55 QLVRSCSTKAVDGMNILLTSDKAKAAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEL 114 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILL 197 P K ++ HE C+ C C C S N L Sbjct: 115 MEIEHQKYPYKPKVEPHEVDMSHPFYRYDPNQCIACGQCVEVCQSLQVNETLSLDWEAER 174 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D+ + D C + C CP Sbjct: 175 P--RVIWDTGV--------AINDS----SCVSCGQCVTVCP 201 >gi|283833246|ref|ZP_06352987.1| electron transport complex protein RnfC [Citrobacter youngae ATCC 29220] gi|291070882|gb|EFE08991.1| electron transport complex protein RnfC [Citrobacter youngae ATCC 29220] Length = 674 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 28/109 (25%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Sbjct: 367 EMGETPEEKGCIRCSACADACPADLLPQQLYWFSKG---------QQHDKSTT------- 410 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK----------AIAKIKMMLLDRK 258 + C C CP + + AI++ + + K Sbjct: 411 --HNIADCIECGACAWVCPSNIPLVQYFRQEKAEIYAISQEEKRAAEAK 457 >gi|88803004|ref|ZP_01118531.1| FAD linked oxidase-like protein [Polaribacter irgensii 23-P] gi|88781862|gb|EAR13040.1| FAD linked oxidase-like protein [Polaribacter irgensii 23-P] Length = 970 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 29/111 (26%), Gaps = 9/111 (8%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + L ++ + +C C T CPSY + Sbjct: 535 RYEVDRKEPIIETLQDFSDNEGILKLAEKCNGSGDCRKPVEAGGTMCPSYRATKNEKDTT 594 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R ++ + L L C + C CP ++ A Sbjct: 595 RARANMLRDVLTNNTASNKFDSKEL--KEVLDLCLSCKACASECPSNVDIA 643 >gi|302342420|ref|YP_003806949.1| heterodisulfide reductase, C subunit [Desulfarculus baarsii DSM 2075] gi|301639033|gb|ADK84355.1| putative heterodisulfide reductase, C subunit [Desulfarculus baarsii DSM 2075] Length = 214 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 13/126 (10%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +Q + + +E + +C+ C C +CP GP Sbjct: 12 AQGTQSKDKAPATRAYEPDFCNEVYEKVDCGSEIKQCMQCGVCGATCP---LRDQMVYGP 68 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L R R + + + + C + C CP+G+ + + Sbjct: 69 RQLWMLIR----------AGRREQVLNCPDIMLCTSCYTCKVRCPRGVRVIDVMHGLANY 118 Query: 254 LLDRKI 259 + + I Sbjct: 119 AIKQGI 124 >gi|261339612|ref|ZP_05967470.1| electron transport complex protein RnfC [Enterobacter cancerogenus ATCC 35316] gi|288318434|gb|EFC57372.1| electron transport complex protein RnfC [Enterobacter cancerogenus ATCC 35316] Length = 678 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ + L Sbjct: 367 EMGEEQEEKGCIRCSACADACPADLLPQQLYWYSKG---------QLHDKAKAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 415 ------DCIECGACAWVCPSNIPLVQ 434 >gi|14717798|gb|AAB18330.2| formate dehydrogenase alpha subunit [Moorella thermoacetica] Length = 893 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 26/104 (25%), Gaps = 11/104 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P +EL E+ + +C++C C +C L Sbjct: 113 AYTYGVKHGELPVKREELPVLKENPFIVRDYNKCIVCGRCVRACQEVQVQRVVDLVGKGS 172 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R + + C NC Q CP G Sbjct: 173 AA--------RVGATKAGAEVSLEEGG---CVFCGNCVQVCPVG 205 >gi|78188998|ref|YP_379336.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium chlorochromatii CaD3] gi|78171197|gb|ABB28293.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium chlorochromatii CaD3] Length = 278 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 5/96 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C +CP + + +W+ S + + Sbjct: 160 FWKKEFERCIKCYACRQACPMCYCRRC-----VVDNNQPQWVNTSSHTLGNFEWNLVRAF 214 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC NC ++CP + ++ +L+ Sbjct: 215 HLAGRCVGCGNCDRACPVNIPLRLLNTRMAQEVLNA 250 >gi|18977263|ref|NP_578620.1| sulfhydrogenase beta subunit [Pyrococcus furiosus DSM 3638] gi|18892932|gb|AAL81015.1| sulfhydrogenase beta subunit [Pyrococcus furiosus DSM 3638] Length = 367 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 27/154 (17%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 KD+ + ++ + L E + +C+ C C+T+CP+ Sbjct: 188 KDICAFRDFEKRRQQAFKY--HEDWGNLRYLLELEMEHPMWDEEADKCLACGICNTTCPT 245 Query: 183 --------------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--DNLED 220 W+S ++ ++ + + +D F+ L + + Sbjct: 246 CRCYEVQDIVNLDGVTGYRERRWDSCQFRSHGLVAGGHNFRPTKKDRFRNRYLCKNAYNE 305 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C CT CP ++ + ++ +L Sbjct: 306 KLGLSYCVGCGRCTAFCPANIS---FVGNLRRIL 336 >gi|307265233|ref|ZP_07546791.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919677|gb|EFN49893.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] Length = 513 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 19/104 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D++ +C+ C C CP Y SD L P I A + +I E L + Sbjct: 127 DKRAHIDYDKCIECGRCKDVCP-YNAISDT-LRPCIRSCAAKAII------MDEELKAVI 178 Query: 220 DPFRLYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 + + C + CT +CP G ++ +AI K + Sbjct: 179 NYEK---CTSCGMCTLACPFGAITDKSYIVDIIRAIKSGKKVYA 219 >gi|262193785|ref|YP_003264994.1| D-lactate dehydrogenase (cytochrome) [Haliangium ochraceum DSM 14365] gi|262077132|gb|ACY13101.1| D-lactate dehydrogenase (cytochrome) [Haliangium ochraceum DSM 14365] Length = 992 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 27/88 (30%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D C+ C C CPS + + R + + + L Sbjct: 557 EDEAERCIECGFCEPVCPSRRLTLTPRQRIVVRRELARLEAEPGRSSEEQELRRDYAYAG 616 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP ++ + +++ Sbjct: 617 LATCAGDGLCAGACPVAIDTGALVKRLR 644 >gi|189347099|ref|YP_001943628.1| FAD linked oxidase domain protein [Chlorobium limicola DSM 245] gi|189341246|gb|ACD90649.1| FAD linked oxidase domain protein [Chlorobium limicola DSM 245] Length = 1218 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 5/96 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T C Y+ + + P A L D++ E + Sbjct: 777 DYCIRCGKCKTDCCVYYPSRGMFYHPRNKNLAIGSLIEALLFDAQRERSTDFELLQWLDE 836 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ + + +L R Sbjct: 837 VADHCTICHKCLKPCPVDIDTGEVSVLERELLAGRG 872 >gi|320333930|ref|YP_004170641.1| formate dehydrogenase subunit alpha [Deinococcus maricopensis DSM 21211] gi|319755219|gb|ADV66976.1| formate dehydrogenase, alpha subunit [Deinococcus maricopensis DSM 21211] Length = 1008 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 33/202 (16%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMK------- 105 G ++D L + ++ P + C +C + +DG T AC ++ Sbjct: 15 RTGEPLVDALNRAQLEL-PQVCYHPQLGPIQTCDTCIVEVDGQLTRACGTPVRAGMQVRT 73 Query: 106 ------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + L H + + + + + H + +P + + + Sbjct: 74 EVNAARRAREDAFDRLLAHHELYCTVCDNNNGNCTVHNTTALMRVQHQTRPFQPKPYAVD 133 Query: 160 DRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLD 216 D +C++C C +C + N + R L D RD + Sbjct: 134 DTNPFYRYDPDQCILCGRCVEACQNLQVNETLSINWESAHP--RVLWDGGRDIGES---- 187 Query: 217 NLEDPFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 188 ---------SCVSCGHCVTVCP 200 >gi|296108102|ref|YP_003619803.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila 2300/99 Alcoy] gi|295650004|gb|ADG25851.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila 2300/99 Alcoy] Length = 371 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 22/120 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + + C+ C C+ CP+ + +S+ + DS Sbjct: 249 RWDEVAERCLSCGNCTLVCPTCFCHSEVEKPSLDGCTSEHHREWDSCFTTGHTYLNGKII 308 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ + + L + C C CP G++ + +A I RKI Sbjct: 309 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCVTWCPVGIDITEELAAISGESNARKI 368 >gi|283850212|ref|ZP_06367501.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio sp. FW1012B] gi|283574238|gb|EFC22209.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio sp. FW1012B] Length = 949 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 9/127 (7%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 S F Q+ + P+ + L+S + C+ C C + CPS S Sbjct: 512 SAFDPQNLLNPGVILNDDPEVHMKDLKSLTQV--NPVIDPCIECGYCESVCPSRNVTST- 568 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKA 246 P + R++ R++ + D + + T C CP ++ Sbjct: 569 ---PRQRITLQRYMALLRNQGRASEYQAFHDGYEYFGNQTCAADGLCATVCPVSVDTGVF 625 Query: 247 IAKIKMM 253 + Sbjct: 626 TKDYRRR 632 >gi|281412300|ref|YP_003346379.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga naphthophila RKU-10] gi|281373403|gb|ADA66965.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga naphthophila RKU-10] Length = 435 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 18/88 (20%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP YL +R + Sbjct: 355 PQPQKPCIRCSECVQVCPMNLQPYLLYL------------------LSTKRKYDEAVENG 396 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C +CT +CP + + I K Sbjct: 397 LMDCIECGSCTYTCPSKIEHVRYIKLAK 424 >gi|152981491|ref|YP_001354804.1| (S)-2-hydroxy-acid oxidase [Janthinobacterium sp. Marseille] gi|151281568|gb|ABR89978.1| (S)-2-hydroxy-acid oxidase [Janthinobacterium sp. Marseille] Length = 1332 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 862 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 921 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 922 --ADHCTVCHKCLTPCPVDIDFGDVSMNMRNLL 952 >gi|91786760|ref|YP_547712.1| FAD linked oxidase-like protein [Polaromonas sp. JS666] gi|91695985|gb|ABE42814.1| FAD linked oxidase-like protein [Polaromonas sp. JS666] Length = 1300 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 827 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 886 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 887 --ADHCTVCHKCLTPCPVDIDFGDVSMNMRNLL 917 >gi|73540133|ref|YP_294653.1| hypothetical protein Reut_A0427 [Ralstonia eutropha JMP134] gi|72117546|gb|AAZ59809.1| Protein of unknown function DUF224, cysteine-rich region:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Ralstonia eutropha JMP134] Length = 1324 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWDEFSDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCATPCPVKIDFGDVSMNMRNLL 943 >gi|189500206|ref|YP_001959676.1| FAD linked oxidase domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495647|gb|ACE04195.1| FAD linked oxidase domain protein [Chlorobium phaeobacteroides BS1] Length = 1202 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 10/96 (10%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPA-------ILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T C Y+ + P L++A ++ + E L LED Sbjct: 763 CIRCGKCKTDCCVYYPARGMFYHPRNKNLAIGSLIEALLYVAQRERSTEFELLQWLEDV- 821 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ + + ++ +L+ + Sbjct: 822 -ADHCTICHKCLKPCPVDIDTGEV-SVLERDILEAR 855 >gi|312131902|ref|YP_003999242.1| NADH dehydrogenase subunit i [Leadbetterella byssophila DSM 17132] gi|311908448|gb|ADQ18889.1| NADH dehydrogenase subunit I [Leadbetterella byssophila DSM 17132] Length = 183 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 15/124 (12%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP V K + + + HF+S +I H ++ G C C Sbjct: 23 LPG--VFKGMAITLKHFFSPKPTIRY--PEQKRYLGPVFRGHHILKRDEQGRERCTACGL 78 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ +CP+ + YR E+ + L RC C + Sbjct: 79 CAVACPAEAISMVAAERVKGEEHLYR----------EEKYAAAYEINML-RCIFCGLCEE 127 Query: 236 SCPK 239 +CPK Sbjct: 128 ACPK 131 >gi|255026848|ref|ZP_05298834.1| hypothetical protein LmonocytFSL_11906 [Listeria monocytogenes FSL J2-003] Length = 597 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKD-------------MKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + KD + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E K P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R + +R P L C + C CP Sbjct: 166 TLSIDWERS--------QPRVIWDDDR------PANLSSCVSCGLCATVCP 202 >gi|254462535|ref|ZP_05075951.1| cytochrome c oxidase accessory protein CcoG [Rhodobacterales bacterium HTCC2083] gi|206679124|gb|EDZ43611.1| cytochrome c oxidase accessory protein CcoG [Rhodobacteraceae bacterium HTCC2083] Length = 476 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 27/118 (22%), Gaps = 9/118 (7%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY + + C CP + Sbjct: 167 WVFYFADAPTLLSNLINFTAHPAAYITIAILTATTFVFGGFMREQVCIYMCP-WPRIQAA 225 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNPAK 245 + P + AY RD +R ++ C M C CP G++ Sbjct: 226 MMDPDTITVAY------RDWRGEDRKNSEAVKAGAPQGDCIDCMACANVCPVGIDIRD 277 >gi|114707966|ref|ZP_01440858.1| putative glycolate oxidase [Fulvimarina pelagi HTCC2506] gi|114536595|gb|EAU39727.1| putative glycolate oxidase [Fulvimarina pelagi HTCC2506] Length = 1041 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 11/96 (11%) Query: 168 YECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C S CPSY + R I + D + + Sbjct: 563 EMCNNNGACRKSAGAVMCPSYRVTRNERDVTRGRANTLRLAISGQLGPDAIHSDEMAETL 622 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C + C + CP G++ +AK+K +L ++ Sbjct: 623 KL--CVSCKACRRECPTGVD----MAKMKAEVLYQR 652 >gi|94970018|ref|YP_592066.1| FAD linked oxidase-like [Candidatus Koribacter versatilis Ellin345] gi|94552068|gb|ABF41992.1| FAD linked oxidase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 1013 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 13/84 (15%) Query: 169 ECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDS---RDEFQGERLDNLED 220 CV C CPSY + ++ RD +Q E + Sbjct: 562 RCVGVGECRRHENKVMCPSYRVTGEEQHSTRGRAHLLFEMMQGEIIRDGWQSEEVK---- 617 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPA 244 L C + C CP ++ A Sbjct: 618 -ESLDLCLSCKGCKSDCPVNVDVA 640 >gi|330823666|ref|YP_004386969.1| formate dehydrogenase subunit alpha [Alicycliphilus denitrificans K601] gi|329309038|gb|AEB83453.1| formate dehydrogenase, alpha subunit [Alicycliphilus denitrificans K601] Length = 953 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A R + +L+DP Sbjct: 166 MAVQLDACIQCTRCVRACREVQVND-------VIGYALR-------GADAKIAFDLDDPM 211 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L+P + K +DRK+ Sbjct: 212 GESTCVGCGECVQACPTGALSPKTHVGSQK---VDRKV 246 >gi|307611328|emb|CBX00989.1| hypothetical protein LPW_26911 [Legionella pneumophila 130b] Length = 379 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 22/111 (19%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + D C+ C C+ CP+ + +S+ G + DS Sbjct: 257 RWDDVAERCLSCGNCTLVCPTCFCHSEVEKPGLDGCNSEHHREWDSCFTTGHTYLNGKII 316 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 RD+ + + L + C C CP G++ + +A I Sbjct: 317 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCVTWCPVGIDITEELAVI 367 >gi|319764059|ref|YP_004127996.1| formate dehydrogenase, alpha subunit [Alicycliphilus denitrificans BC] gi|317118620|gb|ADV01109.1| formate dehydrogenase, alpha subunit [Alicycliphilus denitrificans BC] Length = 953 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A R + +L+DP Sbjct: 166 MAVQLDACIQCTRCVRACREVQVND-------VIGYALR-------GADAKIAFDLDDPM 211 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L+P + K +DRK+ Sbjct: 212 GESTCVGCGECVQACPTGALSPKTHVGSQK---VDRKV 246 >gi|291296248|ref|YP_003507646.1| NADH-quinone oxidoreductase chain I [Meiothermus ruber DSM 1279] gi|290471207|gb|ADD28626.1| NADH-quinone oxidoreductase, chain I [Meiothermus ruber DSM 1279] Length = 177 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 14/105 (13%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + H + +GL +C+ C+ C+ +CP+Y + Sbjct: 20 KPVTIPYPDAPVPLKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIYVEAA------ 73 Query: 197 LQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D GER + + L RC C ++CP G Sbjct: 74 ------ENDPNNPVSAGERYARVYEINML-RCIFCGMCEEACPTG 111 >gi|146311475|ref|YP_001176549.1| electron transport complex protein RnfC [Enterobacter sp. 638] gi|145318351|gb|ABP60498.1| electron transport complex, RnfABCDGE type, C subunit [Enterobacter sp. 638] Length = 673 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ + L Sbjct: 367 EMGEEQEEKGCIRCSACADACPADLLPQQLYWFSKG---------QLHDKAKAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 415 ------DCIECGACAWVCPSSIPLVQ 434 >gi|94987526|ref|YP_595459.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Lawsonia intracellularis PHE/MN1-00] gi|94731775|emb|CAJ55138.1| Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00] Length = 404 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 11/96 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++ + C+ C+ C+ +CP A R+ RL ++ Sbjct: 1 MNPLESIDSCITCSICTINCPVIAATKKFKGPKLTGPSAERF-----------RLKQQKE 49 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C C SCP + + + Sbjct: 50 IEGLSYCSNCKCCDISCPSNVKISSLNMLARAEYYR 85 >gi|328553883|gb|AEB24375.1| YjgC [Bacillus amyloliquefaciens TA208] gi|328911259|gb|AEB62855.1| formate dehydrogenase, alpha subunit [Bacillus amyloliquefaciens LL3] Length = 985 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++++G +C +KD Sbjct: 12 VEMEAADGQTVLQLLNNSSIDVPHVCYHPSLGPIETCDTCIVDVNGELVRSCSAQIKDGD 71 Query: 109 GAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + L + + + + H +++ P K Sbjct: 72 IIDTLSSDVKKAQIIGMDNILHNHELYCTVCDYNNGSCEVHNTVKEMKINHQSIPFDQKP 131 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + D Sbjct: 132 YPKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLSIDW--------------DRKHPR 177 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 + + + P C + +C+ CP Sbjct: 178 VIWDQDVPINESSCVSCGHCSTVCP 202 >gi|269139125|ref|YP_003295826.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Edwardsiella tarda EIB202] gi|267984786|gb|ACY84615.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Edwardsiella tarda EIB202] gi|304559051|gb|ADM41715.1| Pyruvate-flavodoxin oxidoreductase [Edwardsiella tarda FL6-60] Length = 1176 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + PA L A + +RD Sbjct: 672 WEKRNIAEAIPIWQPALCTQCNHCVAACP-HAAIRAKVVAPAALEHAPATLESLEVRARD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +GER P C C CP Sbjct: 731 -LRGERYVLQVAPE---DCTGCNLCVTVCP 756 >gi|169837543|ref|ZP_02870731.1| electron transport complex protein RnfC [candidate division TM7 single-cell isolate TM7a] Length = 501 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 18/78 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + D ++ + + + + C Sbjct: 187 CISCGYCVEACPMNLMPFEFA-----------------DYYKNGKYEKMATAN-IQNCIE 228 Query: 230 IMNCTQSCPKGLNPAKAI 247 C CP + ++I Sbjct: 229 CGACEFVCPSRVPLMESI 246 Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 9/18 (50%) Query: 226 RCHTIMNCTQSCPKGLNP 243 C + C ++CP L P Sbjct: 186 SCISCGYCVEACPMNLMP 203 >gi|160946965|ref|ZP_02094168.1| hypothetical protein PEPMIC_00927 [Parvimonas micra ATCC 33270] gi|158447349|gb|EDP24344.1| hypothetical protein PEPMIC_00927 [Parvimonas micra ATCC 33270] Length = 444 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K LL ++ + C+ C C CP YL P Sbjct: 334 MMGETQYTPNVTTGKAMGGLLFMTQEESAPKAVSPCIRCGRCVDICPV-------YLQP- 385 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + LQ Y R+ E L C +C+ CP + I K + Sbjct: 386 LYLQLYTL---------KNRVGEAE-KLHLMDCIECGSCSYICPSNRPLVETIRLGKAEV 435 Query: 255 LDRK 258 + Sbjct: 436 RKQG 439 >gi|301058784|ref|ZP_07199771.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447126|gb|EFK10904.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 196 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 13/90 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ SCP L++A + + + + C Sbjct: 27 MCMNCGVCAASCPLREHMDYPPRQIFSLIRAGKR-------------EEVLGSQSIMLCT 73 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C CP+ + + + L + Sbjct: 74 SCYTCVVKCPRSIPVMDVMHGLAHYALKKG 103 >gi|289434387|ref|YP_003464259.1| propanediol utilization protein PduS [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170631|emb|CBH27171.1| propanediol utilization protein PduS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 451 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 17/120 (14%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +L ++ + C+ C C+ CP D + P +++ + Sbjct: 231 TEDTGYLHKLHYQTVEQIFNETKSACIQCTLCTDLCPRKQLGHD--IHPHKVMRHF---- 284 Query: 205 DSRDEFQGERLDNLEDPFRLYR----CHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 E + ++D ++ C C +CP GL+P + +K LL + I Sbjct: 285 -----AVAEDISAIKDDP-IWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGI 338 >gi|282857656|ref|ZP_06266870.1| aldo/keto reductase [Pyramidobacter piscolens W5455] gi|282584506|gb|EFB89860.1| aldo/keto reductase [Pyramidobacter piscolens W5455] Length = 374 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 5/121 (4%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDR 189 Q + ++ +P E + R+ +D + C C C+ CP S Sbjct: 250 NVEQMKDNISYMTDFNPLTEAERRVVAKARETLDALPMIPCTSCNYCAEVCPQNIGISGS 309 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L + + E Q + L R C +C Q CP+ + + K Sbjct: 310 F---TALNLLNIYGNYNYAEGQEKWLVERHGKSRANECVQCGSCEQVCPQHIKIRDNLVK 366 Query: 250 I 250 + Sbjct: 367 V 367 >gi|227012832|gb|ACP09042.1| RnfC-related protein [Vibrio cholerae O395] Length = 800 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|27366363|ref|NP_761891.1| electron transport complex protein RnfC [Vibrio vulnificus CMCP6] gi|27362564|gb|AAO11418.1| Electron transport complex protein rnfC [Vibrio vulnificus CMCP6] Length = 919 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 22/117 (18%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ EC+ C C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRKEISPAGYEMECIRCGACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMMLLDR 257 + + + E L+ L C C CP + +A A+I+ + Sbjct: 402 KAEEFDKCEELN-------LKDCIECGACAFVCPSEIPLVSYYRQAKAEIRTRAQEA 451 >gi|15643016|ref|NP_228058.1| electron transport complex protein, putative [Thermotoga maritima MSB8] gi|4980743|gb|AAD35335.1|AE001708_3 electron transport complex protein, putative [Thermotoga maritima MSB8] Length = 451 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 18/83 (21%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C CP YL +R + L C Sbjct: 376 PCIRCSECVQVCPMNLQPYLLYL------------------LSTKRKYDEAVENGLMDCI 417 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 +CT +CP + + I K Sbjct: 418 ECGSCTYTCPSKIEHVRYIKLAK 440 >gi|300697562|ref|YP_003748223.1| tugsten containing formate dehydrogenase alpha subunit; 2Fe-2S ferredoxin N-term domain (fdwA) [Ralstonia solanacearum CFBP2957] gi|299074286|emb|CBJ53833.1| putative tugsten containing formate dehydrogenase alpha subunit; 2Fe-2S ferredoxin N-term domain (fdwA) [Ralstonia solanacearum CFBP2957] Length = 892 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 48/214 (22%), Gaps = 47/214 (21%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 + + +L L + P L R G C C +++ G Sbjct: 9 IPCEAPEGSLLIDALAAAGAVVPHLCHDKRLTPSGACRLCLVHLQG---------QARPV 59 Query: 109 GAIAVYPLPHMSVIKD---LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE------ 159 + V M V D L + P + E Sbjct: 60 ASCTVEVAEGMRVQSDSGALEALRRTNLELMATHYPASACAAEPHHPFHRLLAEYGVPPG 119 Query: 160 ------------DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + C+ C C C ++ ++R Sbjct: 120 GTPQGGLFQDASHPYIGVSMDRCIYCERCVRICEEVQGQ---------------FVWEAR 164 Query: 208 DEFQGERLDNLEDPFRLY-RCHTIMNCTQSCPKG 240 R+ P L C + C SCP G Sbjct: 165 GRGDATRIATANGPTMLSAGCVSCGACVDSCPSG 198 >gi|268324762|emb|CBH38350.1| hypothetical protein, coenzyme F420 hydrogenase/dehydrogenase beta subunit family [uncultured archaeon] Length = 354 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 16/89 (17%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPA-----------ILLQAYRWLIDSRDEFQGERLDN 217 +C++C C CP + + P L+ L + + R+ + Sbjct: 232 DCIVCKNCRDMCPVCYCKECFFDQPLGDPAGGDLLNLAELRGAIGLPTGQLFYHLTRVYH 291 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + C C +CPK + + Sbjct: 292 VSTT-----CVGCGACEDACPKDIPLTRL 315 >gi|220916528|ref|YP_002491832.1| hypothetical protein A2cp1_1422 [Anaeromyxobacter dehalogenans 2CP-1] gi|219954382|gb|ACL64766.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 167 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 9/95 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 DR+ + C+ C C C L + + R + Sbjct: 49 DREVDEAASACISCGLCEPGCDLARAAP----AVRALGLHAAFRLYGRAGP-----ELAL 99 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C +C CP G+ ++ + + Sbjct: 100 AAGALGACDGCGDCEARCPVGVPISRVVRALHARA 134 >gi|221067715|ref|ZP_03543820.1| cytochrome c oxidase accessory protein CcoG [Comamonas testosteroni KF-1] gi|220712738|gb|EED68106.1| cytochrome c oxidase accessory protein CcoG [Comamonas testosteroni KF-1] Length = 480 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 3/76 (3%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S + + + + R D L C Sbjct: 218 AGYMREQVCKYMCPYARFQSAMFD---KDTMIVSYDVQRGEARGPRRKDVDYKAQGLGDC 274 Query: 228 HTIMNCTQSCPKGLNP 243 C Q CP G++ Sbjct: 275 IDCKLCVQVCPVGIDI 290 >gi|269468925|gb|EEZ80509.1| electron transport complex protein RnfC [uncultured SUP05 cluster bacterium] Length = 502 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 25/86 (29%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D+ K EC+ C C+ CP Y + E D Sbjct: 353 DQSKKPAAQECIRCGACNQVCPVSLLPQQLYWY-----------------AKSENTDKAM 395 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 D + L C C CP + A+ Sbjct: 396 D-YNLADCIECRCCDYVCPSHIPLAE 420 >gi|209885813|ref|YP_002289670.1| D-lactate dehydrogenase [Oligotropha carboxidovorans OM5] gi|209874009|gb|ACI93805.1| D-lactate dehydrogenase [Oligotropha carboxidovorans OM5] Length = 988 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 15/148 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V + D S F R + + C C Sbjct: 521 PGKIVHPPKMDDRSLF----RFKPGYKVEDFKTELDWSAWPGAAGGFQGAVEMCNNNGAC 576 Query: 177 ST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 CPSY + R I + D + + +L C + Sbjct: 577 RKLEGGVMCPSYRATRNEKDVTRGRANTLRLAISGQLGPNALSSDEMMETLKL--CVSCK 634 Query: 232 NCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C + CP G++ +AK+K+ +L ++ Sbjct: 635 GCRRECPTGVD----MAKMKIEVLAARV 658 >gi|148283121|ref|YP_431142.2| formate dehydrogenase subunit alpha [Moorella thermoacetica ATCC 39073] Length = 899 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 26/104 (25%), Gaps = 11/104 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P +EL E+ + +C++C C +C L Sbjct: 113 AYTYGVKHGELPVKREELPVLKENPFIVRDYNKCIVCGRCVRACQEVQVQRVVDLVGKGS 172 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R + + C NC Q CP G Sbjct: 173 AA--------RVGATKAGAEVSLEEGG---CVFCGNCVQVCPVG 205 >gi|146386149|gb|ABC20599.2| formate dehydrogenase alpha subunit [Moorella thermoacetica ATCC 39073] Length = 900 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 26/104 (25%), Gaps = 11/104 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P +EL E+ + +C++C C +C L Sbjct: 113 AYTYGVKHGELPVKREELPVLKENPFIVRDYNKCIVCGRCVRACQEVQVQRVVDLVGKGS 172 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R + + C NC Q CP G Sbjct: 173 AA--------RVGATKAGAEVSLEEGG---CVFCGNCVQVCPVG 205 >gi|329894333|ref|ZP_08270203.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC3088] gi|328923129|gb|EGG30452.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC3088] Length = 469 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 36/133 (27%), Gaps = 10/133 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA-- 174 M +VV + P + V L + Sbjct: 157 KGMKHSSWMVVAFMTGMTFVGYFYPIKQLVPELATFSTGFWQAAWTVFFTLATYINAGWM 216 Query: 175 ---CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTI 230 C CP + S + +++ +R E +G R + + L C Sbjct: 217 REQVCKYMCPYARFQSVMFDKDTLIVS----YNHARGEPRGSRKHDADPKELGLGECIDC 272 Query: 231 MNCTQSCPKGLNP 243 C Q CP G++ Sbjct: 273 QLCVQVCPTGIDI 285 >gi|291483725|dbj|BAI84800.1| hypothetical protein BSNT_02062 [Bacillus subtilis subsp. natto BEST195] Length = 490 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++I+G +C ++KD Sbjct: 12 VEMEASEEQTVLQLLNNSSIEVPQVCYHPSLGPIETCDTCIVSINGELKRSCSAELKDGD 71 Query: 109 GAIAVYP-------------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + P L + + + + H +++ P Sbjct: 72 VIDTLSPDVKKAQVIGMDKILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDHKP 131 Query: 156 QSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ +C++C C +C + W D Sbjct: 132 YHKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 189 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 190 ------------SCVSCGHCSTVCP 202 >gi|269217269|ref|ZP_06161123.1| cysteine-rich domain protein/FAD binding domain protein [Slackia exigua ATCC 700122] gi|269129406|gb|EEZ60491.1| cysteine-rich domain protein/FAD binding domain protein [Slackia exigua ATCC 700122] Length = 1057 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 6/94 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C C C +C Y P + RD + +D + Sbjct: 518 YTAHACARCGYCVRTCEQYAGRGWESQSPRGRYAVIDDIYRGRDSWDRNAIDAVM----- 572 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RC T C C L ++ L+ + Sbjct: 573 -RCTTCERCDTRCQLQLPIEPDSMVLRGKLVHEQ 605 >gi|15641030|ref|NP_230661.1| electron transport complex protein RnfC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227081189|ref|YP_002809740.1| RnfC-related protein [Vibrio cholerae M66-2] gi|229505386|ref|ZP_04394896.1| electron transport complex protein RnfC [Vibrio cholerae BX 330286] gi|229510944|ref|ZP_04400423.1| electron transport complex protein RnfC [Vibrio cholerae B33] gi|229608405|ref|YP_002879053.1| electron transport complex protein RnfC [Vibrio cholerae MJ-1236] gi|9655479|gb|AAF94176.1| RnfC-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227009077|gb|ACP05289.1| RnfC-related protein [Vibrio cholerae M66-2] gi|229350909|gb|EEO15850.1| electron transport complex protein RnfC [Vibrio cholerae B33] gi|229357609|gb|EEO22526.1| electron transport complex protein RnfC [Vibrio cholerae BX 330286] gi|229371060|gb|ACQ61483.1| electron transport complex protein RnfC [Vibrio cholerae MJ-1236] Length = 801 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|563905|emb|CAA53034.1| hydrogenase (alpha subunit) [Pyrococcus furiosus DSM 3638] Length = 367 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 27/154 (17%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 KD+ + ++ + L E + +C+ C C+T+CP+ Sbjct: 188 KDICAFRDFEKRRQQAFQY--HEDWGNLRYLLELEMEHPMWDEEADKCLACGICNTTCPT 245 Query: 183 --------------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--DNLED 220 W+S ++ ++ + + +D F+ L + + Sbjct: 246 CRCYEVQDIVNLDGVTGYRERRWDSCQFRSHGLVAGGHNFRPTKKDRFRNRYLCKNAYNE 305 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C CT CP ++ + ++ +L Sbjct: 306 KLGLSYCVGCGRCTAFCPANIS---FVGNLRRIL 336 >gi|89073352|ref|ZP_01159876.1| electron transport complex protein RnfC [Photobacterium sp. SKA34] gi|89050839|gb|EAR56313.1| electron transport complex protein RnfC [Photobacterium sp. SKA34] Length = 762 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L ++ C+ C+ C+ CPS L Q Y Sbjct: 351 SNVPITKITNCILAPKRKELPLHTYEMACIRCSACADVCPSSLLPQQ--LQWYAKDQNY- 407 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D+ + + L C C CP + + Sbjct: 408 ------DKC---------EEYNLQDCIECGACAYVCPSEIPLVQ 436 >gi|118602283|ref|YP_903498.1| NADH dehydrogenase subunit I [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|156633539|sp|A1AVS0|NUOI_RUTMC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|118567222|gb|ABL02027.1| NADH dehydrogenase subunit I [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 163 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I + H R+ +G C+ C C CP+ Sbjct: 31 KKITVQFPEERTPISPRFRGLHALRRYPNGEERCIACKLCEAVCPA-------------- 76 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A + RD+ R + D L++C C ++CP Sbjct: 77 -NAITIESEMRDDGT--RRTIVYDID-LFKCIFCGFCEEACPVD 116 >gi|73667982|ref|YP_303997.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina barkeri str. Fusaro] gi|72395144|gb|AAZ69417.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanosarcina barkeri str. Fusaro] Length = 806 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 21/127 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 Y + I L + + + D Q + +C C C +CP + Sbjct: 378 YDKLGEISVRLAQEMHPIREAAGVREIPSDEQLKAWVDKCADCGSCYLACPIELDIPEAM 437 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +Y L+NL D C C Q C K + I K Sbjct: 438 KFAKQGDFSY--------------LENLHD-----SCIGCRRCEQVCKKEIPILSVIEKA 478 Query: 251 KMMLLDR 257 ++ Sbjct: 479 SQKIIAE 485 >gi|194337330|ref|YP_002019124.1| DsrK protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309807|gb|ACF44507.1| DsrK protein [Pelodictyon phaeoclathratiforme BU-1] Length = 550 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R L CV C C+ C + D P + + R + + + L Sbjct: 93 RSFKLFLDTCVRCGACADKCHFFLGTGDPKNMPVLRAELIRSVYRNDFPLAEKILKGFSG 152 Query: 221 PFRL-------YR-----CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L + C C+ CP G++ A+ I + LL Sbjct: 153 SRKLTVEVIKEWHMYFNQCTECRRCSVFCPMGIDTAE-ITMMGRELL 198 >gi|300855588|ref|YP_003780572.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528] gi|300435703|gb|ADK15470.1| predicted Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528] Length = 757 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C T C + + +Y + R + + G+ N + Sbjct: 298 EAGRCIKCQC--TECSNVCVHLRKYDIT--PKKYIRQINHNEVIILGDHYAN----EMIN 349 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP L+ I + + +++R Sbjct: 350 SCTLCGLCGEVCPSNLDMKDIIQETRESMVER 381 >gi|297538836|ref|YP_003674605.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] gi|297258183|gb|ADI30028.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] Length = 482 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYR 226 + C CP + + +++ + R E + R N++ L Sbjct: 211 AGFLREQVCLHMCPYARFQGVMFDKDTLIVT----YDEKRGEPRSGRSRNVDAKEKGLGD 266 Query: 227 CHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 267 CIDCSFCVQVCPVGIDIRDGLQY 289 >gi|37679374|ref|NP_933983.1| electron transport complex protein RnfC [Vibrio vulnificus YJ016] gi|37198117|dbj|BAC93954.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Vibrio vulnificus YJ016] Length = 885 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 22/117 (18%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ EC+ C C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRKEISPAGYEMECIRCGACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKMMLLDR 257 + + + E L+ L C C CP + +A A+I+ + Sbjct: 402 KAEEFDKCEELN-------LKDCIECGACAFVCPSEIPLVSYYRQAKAEIRTRAQEA 451 >gi|23015960|ref|ZP_00055722.1| COG0348: Polyferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 485 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 5/82 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C CP + S + ++++ W + R + E Sbjct: 216 LAGYAREQVCLYMCPYSRFQSAMFDEHSLIITYEEWRGEPRKPIRKG-----ESFEGRGH 270 Query: 227 CHTIMNCTQSCPKGLNPAKAIA 248 C C +CP G++ I Sbjct: 271 CIDCRMCVAACPTGIDIRDGIQ 292 >gi|313633764|gb|EFS00506.1| PduS type ferredoxin, putative [Listeria seeligeri FSL N1-067] Length = 455 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 17/120 (14%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 T +L ++ + C+ C C+ CP D + P +++ + Sbjct: 235 TEDTGYLHKLHYQTVEQIFNETKSACIQCTLCTDLCPRKQLGHD--IHPHKVMRHF---- 288 Query: 205 DSRDEFQGERLDNLEDPFRLYR----CHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 E + ++D ++ C C +CP GL+P + +K LL + I Sbjct: 289 -----AVAEDISAIKDDP-IWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGI 342 >gi|255524147|ref|ZP_05391107.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium carboxidivorans P7] gi|296186604|ref|ZP_06855006.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium carboxidivorans P7] gi|255512132|gb|EET88412.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium carboxidivorans P7] gi|296048641|gb|EFG88073.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium carboxidivorans P7] Length = 441 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 30/115 (26%), Gaps = 21/115 (18%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K +L + C+ C C CP + Sbjct: 331 MMGMAQSHIDLPIIKGVSGILALSKKDVNSGRESACIHCGRCVEVCPMHLVP-------- 382 Query: 195 ILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 S+ GER + ++ L C +C CP N + I Sbjct: 383 -----------SKLSILGERGLYEQAKEEANLLDCVECGSCVYVCPAKRNIVQYI 426 >gi|260891964|ref|YP_003238061.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] gi|260864105|gb|ACX51211.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ammonifex degensii KC4] Length = 466 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 31/104 (29%), Gaps = 12/104 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 E R + + CV C C+ C +Y D PA R + Sbjct: 37 KWLDYYRKERRSLVMAMESCVKCGLCAEQCHTYLGTRDPNNIPAGRADLMRKVYKRYFTV 96 Query: 211 QGERLDNLEDPFRL------------YRCHTIMNCTQSCPKGLN 242 QG+ L + Y+C C CP G++ Sbjct: 97 QGKLFGKLVGAEEITMRTLEEWFSYYYQCTECRRCGHVCPFGID 140 >gi|148380718|ref|YP_001255259.1| pyruvate-flavodoxin oxidoreductase [Clostridium botulinum A str. ATCC 3502] gi|153932227|ref|YP_001385002.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. ATCC 19397] gi|153936104|ref|YP_001388472.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. Hall] gi|148290202|emb|CAL84321.1| pyruvate-flavodoxin oxidoreductase [Clostridium botulinum A str. ATCC 3502] gi|152928271|gb|ABS33771.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. ATCC 19397] gi|152932018|gb|ABS37517.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. Hall] Length = 1192 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 53/212 (25%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------QGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ +S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPVLLSDEEVKNAPKGFESKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AAGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|221134899|ref|ZP_03561202.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola sp. HTCC2999] Length = 487 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 22/82 (26%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 G + C CP + S + + + R + + Sbjct: 221 FCTYGNAGWMREIMCIHMCPYARFQSAMFDKDTFTVAYDARRGEGRGPRSRKTTPEQREE 280 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 281 KGLGDCIDCNLCVQVCPTGIDI 302 >gi|11499973|ref|NP_071219.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Archaeoglobus fulgidus DSM 4304] gi|38502847|sp|O30274|ACDA2_ARCFU RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 2; Short=ACDS complex subunit alpha 2; AltName: Full=ACDS complex carbon monoxide dehydrogenase 2; Short=ACDS CODH 2 gi|2650695|gb|AAB91266.1| acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA-2) [Archaeoglobus fulgidus DSM 4304] Length = 798 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 19/86 (22%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + Q ++ C C C+ +CP + + + LE Sbjct: 395 EEQFMEYARACTQCGNCTIACPQGIRIGEAM-----------------EAAENGDRSKLE 437 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + C C Q CPKG+ Sbjct: 438 KEWDV--CIACGRCEQVCPKGIPIID 461 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%) Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R + G RL + C NCT +CP+G+ +A Sbjct: 385 RGDDIGPRLTEEQFMEYARACTQCGNCTIACPQGIRIGEA 424 >gi|119899390|ref|YP_934603.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Azoarcus sp. BH72] gi|119671803|emb|CAL95717.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Azoarcus sp. BH72] Length = 468 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYR 226 + C CP Y P L+ AY + R E +G R ++ L Sbjct: 207 AGFMREQMCKYICP-YAQFQFVMFDPDTLIVAY---DEERGEPRGGRSKKVDARGKGLGD 262 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 263 CIDCSMCVQVCPTGIDI 279 >gi|73669074|ref|YP_305089.1| formate dehydrogenase subunit beta (F420) [Methanosarcina barkeri str. Fusaro] gi|72396236|gb|AAZ70509.1| formate dehydrogenase, beta subunit (F420) [Methanosarcina barkeri str. Fusaro] Length = 401 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 71/252 (28%), Gaps = 55/252 (21%) Query: 15 GKIWNAPTGEKNLKEYRIYRWNPDNKGNPCMDT--YYVDLDNCGPMVLDGLLYIKNKIDP 72 G I + ++ + + NPD+ + + V+ + L N Sbjct: 132 GSISPEMARKMIVETFSV---NPDSVKKERIAKGKFIVETPEEEFSIPIDKLEEAN---- 184 Query: 73 TLTLRRSCREGICGSCGMNIDGTNTLAC--------------------VKDMKDIKGAIA 112 R C C + I LAC + +K K A Sbjct: 185 ------FGRRSNCRRCKLKIPRQADLACGEWGVMGMEATFVEVCSAKGAELLKQAKTAGV 238 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V P V K + + S + E W + + + + +D C+ Sbjct: 239 VETFP--PVPKGVEIRGKIEKSMLKLAEGWREKDFQSLGEGKTRLKQ---LVDETSRCIK 293 Query: 173 CACCSTSCPSY--WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 C C CP+ SD + P + ++ + R + D C Sbjct: 294 CYTCIEVCPALSGTKVSDFTITPGKVPPSFAF--------HALRYSLVAD-----SCINC 340 Query: 231 MNCTQSCPKGLN 242 C + CP + Sbjct: 341 GQCEELCPMDIP 352 >gi|38503399|sp|Q08368|ACDA1_METTE RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 1; Short=ACDS complex subunit alpha 1; AltName: Full=ACDS complex carbon monoxide dehydrogenase 1; Short=ACDS CODH 1 gi|1575538|gb|AAC44650.1| CO dehydrogenase/acetyl-CoA synthase alpha subunit [Methanosarcina thermophila TM-1] Length = 806 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 21/127 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 Y + I L + + D Q + + +C C C CP + Sbjct: 378 YDKLGEISVRLTQEMHPLREAAGLRKIASDEQMKEWVDKCADCGSCYLVCPEELEIPEAM 437 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 Y +L+D D+ C C Q C K + I K Sbjct: 438 --KHAKEGDYSYLVDLHDQ-----------------CIGCRRCEQVCKKEIPILSVIEKA 478 Query: 251 KMMLLDR 257 ++ Sbjct: 479 SQKVIAE 485 >gi|254505773|ref|ZP_05117919.1| putative formate dehydrogenase alpha subunit [Vibrio parahaemolyticus 16] gi|219551426|gb|EED28405.1| putative formate dehydrogenase alpha subunit [Vibrio parahaemolyticus 16] Length = 1402 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 3/104 (2%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +S + WL + + C+ C C +C + + + Sbjct: 602 KSHQDWLNVRAKDSRHKFSVDRSSEFIEFDANRCISCGQCIQACSEQAVHG---ILNFVH 658 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 Q R + D N C C Q+CP G Sbjct: 659 DQHGRPALRPDDRPHFGSSKNGRLLMGDSNCVQCGACVQACPTG 702 >gi|126726909|ref|ZP_01742748.1| formate dehydrogenase, alpha subunit [Rhodobacterales bacterium HTCC2150] gi|126703867|gb|EBA02961.1| formate dehydrogenase, alpha subunit [Rhodobacterales bacterium HTCC2150] Length = 921 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 46/175 (26%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTL-ACVKDMKDIKGAIAV---YPLPHMSVIKDLVVDMSHFYS--Q 135 +G C +C + ++G TL A + ++ +L+V Sbjct: 47 DGNCRACMVEVEGERTLVASCIRPAADGMVVKTDSARAEKARKMVMELLVTDQPDRDAAH 106 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQ----------KIDGLYECVMCACCSTSCPSYWW 185 +S W + E+ + L C+ C C +C Sbjct: 107 DKSSHLWDMADMQDVSDSRFPKLEETRVPLLDASHLAMSVNLDACIQCNLCVRACRDVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N L + D DP C C Q+CP G Sbjct: 167 NDVIGLSGRGADAKITFDFD--------------DPMGASSCVACGECVQACPTG 207 >gi|119899328|ref|YP_934541.1| formate dehydrogenase subunit alpha [Azoarcus sp. BH72] gi|119671741|emb|CAL95654.1| probable formate dehydrogenase, alpha subunit [Azoarcus sp. BH72] Length = 961 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 62/219 (28%), Gaps = 49/219 (22%) Query: 47 TYYVD----LDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNTLACV 101 T+ +D G +L I P L R +G C +C + IDG LA Sbjct: 8 TFELDGRAVDAAPGESILLAARRAGVDI-PHLCYTDGLRADGNCRACVVEIDGERVLAPS 66 Query: 102 KDMKDIKGAIAVYPLPHMSVIK------------------DLVVDMSHFYSQHRSIEPWL 143 P P M V D+ V+ S+ L Sbjct: 67 CCRA---------PKPGMKVQSASSRARASQRMVLELLRADVPVEAEKADSELAYWCEQL 117 Query: 144 KTVSPKPAKELLQSHEDRQKID--GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 + A + L C+ C C +C N ++ A+R Sbjct: 118 GVGDSRFAPREQPVADTSHPGIAVNLAACIQCNRCLRACREIQVND-------VIGYAHR 170 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + +L+ C C Q+CP G Sbjct: 171 -------GAESKIVFDLDVGMGTSSCVGCGECVQACPTG 202 >gi|83309269|ref|YP_419533.1| FdhA-II protein [Magnetospirillum magneticum AMB-1] gi|82944110|dbj|BAE48974.1| FdhA-II protein [Magnetospirillum magneticum AMB-1] Length = 891 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 42/170 (24%), Gaps = 26/170 (15%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHM------SVIKDLVVDM-----S 130 EG C +C + I G LA + + V V + L+ D Sbjct: 44 EGNCRACVVEIKGERALAASCR-RRPTPGMVVEAANGRTAKARRMVFELLLADHASPDPD 102 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 + + A + L C+ C C +C N Sbjct: 103 SAFLGWAGALGVTASRFAPSAAPVRPDTSHPAMAVRLDACIHCTLCLRACREVQVND--V 160 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G + R D C C Q+CP G Sbjct: 161 IGMSGRGADSRITFD------------FAQSMGASSCVGCGECVQACPTG 198 >gi|194332891|ref|YP_002014751.1| DsrK protein [Prosthecochloris aestuarii DSM 271] gi|194310709|gb|ACF45104.1| DsrK protein [Prosthecochloris aestuarii DSM 271] Length = 549 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 16/108 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------------IDS 206 R L CV C C+ C + D P + + R + Sbjct: 92 RSIKLYLDSCVRCGACADKCHFFLGTGDPKNMPVMRAELVRSVYRNDFPMVEKILKGFAG 151 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E L Y+C C+ CP G++ A+ ++ +L Sbjct: 152 SRKLTPEVLKEWH--MYFYQCTECRRCSVFCPMGIDTAEITIMVRELL 197 >gi|119357313|ref|YP_911957.1| FAD linked oxidase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354662|gb|ABL65533.1| FAD linked oxidase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 1218 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 6/96 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T C Y+ + + P A L D++ E + Sbjct: 777 DYCIRCGKCKTDCCVYYPSKGMFYHPRNKNLAIGSLIEALLYDAQRERSTDFELLQWLEE 836 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ + + ++ +L ++ Sbjct: 837 VADHCTICHKCLKPCPVDIDTGEV-SVLEREILSKR 871 >gi|325839544|ref|ZP_08166930.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] gi|325490462|gb|EGC92779.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] Length = 365 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/219 (10%), Positives = 56/219 (25%), Gaps = 24/219 (10%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR---SCREGICGSCGMNID 93 P+ + Y+D ++ + + + Sbjct: 161 PEMDFV-QLQINYLDWEDEQIQSRKCFEVALKHQKDIIVMEPIKGGTLAQVPKPVEALFK 219 Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G N V A LP++ ++ + ++ ++ ++ + Sbjct: 220 GVNPQNSVASWAIRYAAS----LPNVMMVLSGMSNLEQILDNTAYMQNFVPFNEEEFKIV 275 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + C C C CP ++ L +S + Sbjct: 276 ETAT--QIIQNQDFIPCTNCQYCVEGCPKKIAIPSYFI-----------LYNSDTTQKEA 322 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L+ + + C C + CP+ L I +K Sbjct: 323 YLNYTKTHGKASDCIGCKKCERMCPQHLPI---IQYLKE 358 >gi|310658086|ref|YP_003935807.1| iron-sulfur protein [Clostridium sticklandii DSM 519] gi|308824864|emb|CBH20902.1| putative iron-sulfur protein (Cysteine-rich domain protein) [Clostridium sticklandii] Length = 378 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 26/94 (27%), Gaps = 26/94 (27%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL---- 224 +C+ C C CP D L L D Sbjct: 16 KCIGCNACMKGCPMLDRFCD---------------------SPKTLLKKLLDEKSFDYKL 54 Query: 225 -YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C CT+ CP ++ +++ +++ Sbjct: 55 PYSCMQCGYCTKVCPVDVDLKHLFMELRKDTVNQ 88 >gi|312113375|ref|YP_004010971.1| reductase, iron-sulfur binding subunit [Rhodomicrobium vannielii ATCC 17100] gi|311218504|gb|ADP69872.1| putative reductase, iron-sulfur binding subunit [Rhodomicrobium vannielii ATCC 17100] Length = 539 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 16/109 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSR------ 207 +R L CV C C+ C + D P R + + R Sbjct: 70 NRALRFYLDGCVRCGACTDKCHYFLGTGDPNNMPVARQNLMRKVYRRYFTLSGRIAPSLV 129 Query: 208 --DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ E LD ++C C+ CP G++ A+ + ++ Sbjct: 130 GAEDLTREVLDEWYTY--FHQCSQCRRCSVYCPFGIDTAEISMAAREIM 176 >gi|111025575|ref|YP_707995.1| oxidoreductase [Rhodococcus jostii RHA1] gi|110824554|gb|ABG99837.1| probable oxidoreductase [Rhodococcus jostii RHA1] Length = 971 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 8/80 (10%) Query: 169 ECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-GERLDNLEDPF 222 C+ C + CPSY D + + ++ R E + + Sbjct: 566 RCIGVGRCRSHSGGVMCPSYRATGDEKDSTRGRSRVLQDMV--RGARTVDEGWASEDVRD 623 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 L C + C+ CP G++ Sbjct: 624 ALDLCLSCKACSTDCPTGVD 643 >gi|309790986|ref|ZP_07685526.1| hypothetical protein OSCT_1477 [Oscillochloris trichoides DG6] gi|308226959|gb|EFO80647.1| hypothetical protein OSCT_1477 [Oscillochloris trichoides DG6] Length = 524 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 13/106 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ----AYRW-------LIDSRDE 209 + + L C+ C C +C Y + L P YR + Sbjct: 14 AEDVVNLEACMDCKRCGDACAWYLGTGEEKLHPTYKTNFVRDIYRRYMTLEGKIAGPLGL 73 Query: 210 FQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D+L + + C CT +CP GL+ +++ ++ Sbjct: 74 IPTPTADDLREHMASFWHCTACGRCTLACPAGLS-TRSLVRMARAA 118 >gi|315505784|ref|YP_004084671.1| d-lactate dehydrogenase (cytochrome) [Micromonospora sp. L5] gi|315412403|gb|ADU10520.1| D-lactate dehydrogenase (cytochrome) [Micromonospora sp. L5] Length = 931 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 36/134 (26%), Gaps = 16/134 (11%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSC 180 Y R ++ LL D + CV C C C Sbjct: 491 DELYEVMRELKTLCDPDGVLNPGVLLSDDPDIHMRHLKTVPAVEEEVDRCVECGYCEPVC 550 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI---MNCTQSC 237 PS D P + R + ++ L D + T C +C Sbjct: 551 PSR----DLTTTPRQRIVLRREIAAAQAAGDTALARELTDDYDYDAVQTCAVDGMCATAC 606 Query: 238 PKGLNPAKAIAKIK 251 P +N + +++ Sbjct: 607 PVLINTGDLVKRLR 620 >gi|307565941|ref|ZP_07628400.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella amnii CRIS 21A-A] gi|307345369|gb|EFN90747.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Prevotella amnii CRIS 21A-A] Length = 416 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 12/89 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PF 222 + L +C+ C+ C+ CP +Y GP S + + RL N + Sbjct: 11 KNNLEQCLKCSICTAYCPVSAVEP-KYPGPK----------HSGPDVERYRLKNEKYFEE 59 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C C +CP + A I + Sbjct: 60 ILKLCLNCKRCEVACPHNVRIADIIQSSR 88 >gi|148360077|ref|YP_001251284.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila str. Corby] gi|148281850|gb|ABQ55938.1| cytochrome c3 hydrogenase alpha (or beta) chain [Legionella pneumophila str. Corby] Length = 379 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 22/120 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLIDS-------------- 206 + + C+ C C+ CP+ + +S+ + DS Sbjct: 257 RWDEVAERCLSCGNCTLVCPTCFCHSEVEKPSLDGCTSEHHREWDSCFTTGHTYLNGKII 316 Query: 207 RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RD+ + + L + C C CP G++ + +A I RKI Sbjct: 317 RDDTKKQYRQWLTHKVGSWFDQFDTSGCVGCGRCVTWCPVGIDITEELAAISGESNARKI 376 >gi|159043218|ref|YP_001532012.1| nitrogen fixation protein fixG [Dinoroseobacter shibae DFL 12] gi|157910978|gb|ABV92411.1| nitrogen fixation protein fixG [Dinoroseobacter shibae DFL 12] Length = 480 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 23/114 (20%), Gaps = 5/114 (4%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 FY C +CP + Sbjct: 168 WVFYFTDAPTLLRDLVTFSAHPVAYTTIAILTATTFVFGGFAREQICIYACPWPRIQAAM 227 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + + W + R + + E C M C CP G++ Sbjct: 228 MDEDTLTIGYRDWRGEPRGKHRK-----AEGAEEKGDCIDCMACVNVCPMGIDI 276 >gi|329765882|ref|ZP_08257448.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137725|gb|EGG41995.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 180 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 6/93 (6%) Query: 168 YECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 C+ C + CP ++ W PA + + + E Q ERLD + + Sbjct: 73 DSCIAAGSCMSVCPVQTFQWYRTEQDIPAKDVVGKVFEGTGKTE-QDERLDYTDKSQPIR 131 Query: 225 -YRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLL 255 + C M C + CP G + A+ + Sbjct: 132 EHDCTVCMACQEICPTGSIRIEPAMLEWHEKAA 164 >gi|313200191|ref|YP_004038849.1| cytochrome c oxidase accessory protein ccog [Methylovorus sp. MP688] gi|312439507|gb|ADQ83613.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. MP688] Length = 479 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 6/82 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---- 222 C +CP Y P Y R + + L++P Sbjct: 205 AAGFARENICRVACP-YGKFQSAMQDPLTKTVVYDAARGERTQGRQPPAKALKEPGSRQQ 263 Query: 223 -RLYRCHTIMNCTQSCPKGLNP 243 + C C CP G++ Sbjct: 264 QGVGDCIDCGYCVNVCPTGVDI 285 >gi|297617378|ref|YP_003702537.1| heterodisulfide reductase, C subunit [Syntrophothermus lipocalidus DSM 12680] gi|297145215|gb|ADI01972.1| putative heterodisulfide reductase, C subunit [Syntrophothermus lipocalidus DSM 12680] Length = 185 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 13/99 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 LQ + L C C CS C + + P ++Q + Sbjct: 12 LQEQIENDCRVDLSCCYECGKCSGGCSTAYLMDYT---PRQVIQLIKLGA---------- 58 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L ++ C + C CP ++ + + ++ M Sbjct: 59 KEALLQSKAIWVCVSCHLCQDRCPAAIDIPRIMDYLREM 97 >gi|253998122|ref|YP_003050185.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. SIP3-4] gi|253984801|gb|ACT49658.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. SIP3-4] Length = 479 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 6/82 (7%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---- 222 C +CP Y P Y R + + L++P Sbjct: 205 AAGFARENICRVACP-YGKFQSAMQDPLTKTVVYDAARGERTQGRQPPAKALKEPGSRQQ 263 Query: 223 -RLYRCHTIMNCTQSCPKGLNP 243 + C C CP G++ Sbjct: 264 QGVGDCIDCGYCVNVCPTGVDI 285 >gi|268678786|ref|YP_003303217.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulphur binding protein [Sulfurospirillum deleyianum DSM 6946] gi|268616817|gb|ACZ11182.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulphur binding protein [Sulfurospirillum deleyianum DSM 6946] Length = 825 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 23/191 (12%) Query: 72 PTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIKGAIA----VYPLP--------- 117 P L +C C C ++IDG +C K+ I + Sbjct: 33 PALCYVTNCSPTLACRLCLVDIDGKRAYSCNARAKEGMNVITKSEEIEKERRAIMEIYDV 92 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + + Q+ ++ + A + + + C++C C Sbjct: 93 NHPLECGVCDQSGECELQNYTLHMGVDAQHHCIADTHRPTKQWGRIHYDASLCIVCERCV 152 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF--------QGERLDNLEDPFRLYRCHT 229 T C S P + + D ++ Q + L C Sbjct: 153 TVCKDMIGESALKTVPRGGAELDKTWKDKTEKDAYAMWNKLQKSIIGIASGAESL-DCTQ 211 Query: 230 IMNCTQSCPKG 240 CT CP G Sbjct: 212 CGECTAVCPVG 222 >gi|119896806|ref|YP_932019.1| electron transport complex protein RnfC [Azoarcus sp. BH72] gi|119669219|emb|CAL93132.1| probable electronen transport complex protein RnfC [Azoarcus sp. BH72] Length = 519 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 23/91 (25%), Gaps = 18/91 (19%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ CA C +CP L A L++ L Sbjct: 380 AGPCIRCASCVGACPIGLMP----LDMAALIKHGDL--------------AASVDIGLKD 421 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C+ CP + K L + Sbjct: 422 CIGCGTCSYVCPSKIPLVHYFNHAKGELAAQ 452 >gi|294338445|emb|CAZ86771.1| Tungsten-containing formate dehydrogenase alpha subunit [Thiomonas sp. 3As] Length = 949 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 55/204 (26%), Gaps = 46/204 (22%) Query: 82 EGICGSCGMNIDGTNTLACVK--------------DMKDIKGAIAVY------PLPHMSV 121 +G C +C + IDG LA + + P Sbjct: 46 DGNCRACMVEIDGERVLAPSCCRTAAPGMKVHADSPRAVKSQNMVLEMLLSDLPETGYKW 105 Query: 122 IKDLVVDM-----SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 + D Q + P L + L C+ C C Sbjct: 106 LGDDATRPHGELSDWAARQSVQVRPALGETRRTQPAPDVSHPAMAV---NLDACIQCNRC 162 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 +C N ++ A+R E + +L DP C C Q+ Sbjct: 163 VRACREEQVND-------VIGYAFR-------GHHSEIVFDLHDPMGDSTCVACGECVQA 208 Query: 237 CPKG-LNPAKAIAKIKMMLLDRKI 259 CP G L P I +DR++ Sbjct: 209 CPTGALMPKTHIGA---QTVDRRV 229 >gi|226358185|ref|YP_002787924.1| formate dehydrogenase, alpha subunit [Deinococcus deserti VCD115] gi|226319828|gb|ACO47822.1| putative formate dehydrogenase, alpha subunit [Deinococcus deserti VCD115] Length = 999 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 48/171 (28%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVY-------------PLPHMSVIKDLVVDM 129 C +C +N++G T AC + L + + + + Sbjct: 47 QTCDTCIINVNGELTRACGTKVTAGMRVSTETTEARQARATAFDKILGNHLLYCTVCDNN 106 Query: 130 SHFYSQHRS--IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + + V+P K L+ + +C++C C +C + N Sbjct: 107 NGNCVVHNTTALMKVQHQVTPYHPKPYLKDETNPFYRYDPDQCILCGRCVEACQNLQVNE 166 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D C + +C CP Sbjct: 167 TLTINWEDPHP--RVLWDGGRPINES------------SCVSCGHCVTVCP 203 >gi|225018570|ref|ZP_03707762.1| hypothetical protein CLOSTMETH_02519 [Clostridium methylpentosum DSM 5476] gi|224948672|gb|EEG29881.1| hypothetical protein CLOSTMETH_02519 [Clostridium methylpentosum DSM 5476] Length = 372 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 35/127 (27%), Gaps = 13/127 (10%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + ++ + + + E L C C C+ CP Sbjct: 248 MSSVEQMKDNLSYMKDFHRLTEKQQDTIRRAQKELA--KIPLIPCTTCNYCAKVCP---- 301 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGER----LDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + +G + A +L D+ L R +C C CP+ + Sbjct: 302 ---KNIGISGSFTAMNYLTLYGDKAAAAHQEGWLVGGHGKNRADQCIKCGKCETVCPQHI 358 Query: 242 NPAKAIA 248 K + Sbjct: 359 AIRKDLE 365 Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C + CPK + + + + Sbjct: 290 CTTCNYCAKVCPKNIGISGSFTAMN 314 >gi|58198979|gb|AAW66136.1| ferredoxin [Rubrivivax gelatinosus] Length = 496 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 3/85 (3%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 G + C CP + S + +++ D R + L Sbjct: 224 WGNAGYMREQVCKYMCPYARFQSAMFDKDTLIISYDAERGDPRGTRSRKIDAR---SQGL 280 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 281 GDCIDCGLCVQVCPTGIDIRDGLQY 305 >gi|325269239|ref|ZP_08135858.1| pyruvate-ferredoxin oxidoreductase [Prevotella multiformis DSM 16608] gi|324988468|gb|EGC20432.1| pyruvate-ferredoxin oxidoreductase [Prevotella multiformis DSM 16608] Length = 1191 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C CS CP + + + D Sbjct: 675 YDKRGVAAFVPTWDAENCIQCNKCSFVCPHACIRP----FVLDEQEKAGFNEPTLDVLAP 730 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 731 KQLKGMQFRIEVSVLDCTGCGNCADVCP 758 >gi|296132740|ref|YP_003639987.1| FAD linked oxidase domain protein [Thermincola sp. JR] gi|296031318|gb|ADG82086.1| FAD linked oxidase domain protein [Thermincola potens JR] Length = 1023 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 23/93 (24%), Gaps = 6/93 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C +C P R + + + +D Sbjct: 497 MARASFACAQCGYCVDTCTLNMGFGWESSTPRGKWYILREYLKGNLQLDQKTVDM----- 551 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C T C C L + + ML+ Sbjct: 552 -FLMCTTCKRCNPVCQVNLPIMELWDAFRPMLV 583 >gi|289768496|ref|ZP_06527874.1| oxidase [Streptomyces lividans TK24] gi|289698695|gb|EFD66124.1| oxidase [Streptomyces lividans TK24] Length = 1029 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 36/154 (23%), Gaps = 12/154 (7%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + PL M+ K VV R W Sbjct: 530 MYGDRLVEAFGRLKAVFDPLDRMNPGK--VVAPYGLDDNLRLGGDWAP--FEPRDLHFRF 585 Query: 157 SHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGPAILLQAYRWLIDSR-D 208 H+ CV C CPSY + + ++D D Sbjct: 586 PHDGGSFSQAANRCVGVGKCRQHTSDGTVMCPSYQVTREEEHSTRGRARLLFEMLDGHGD 645 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + E L C C + CP ++ Sbjct: 646 GAIRDGWRSQEVKDALDLCLACKGCKKDCPADVD 679 >gi|256784611|ref|ZP_05523042.1| oxidase [Streptomyces lividans TK24] Length = 1006 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 36/154 (23%), Gaps = 12/154 (7%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + PL M+ K VV R W Sbjct: 507 MYGDRLVEAFGRLKAVFDPLDRMNPGK--VVAPYGLDDNLRLGGDWAP--FEPRDLHFRF 562 Query: 157 SHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGPAILLQAYRWLIDSR-D 208 H+ CV C CPSY + + ++D D Sbjct: 563 PHDGGSFSQAANRCVGVGKCRQHTSDGTVMCPSYQVTREEEHSTRGRARLLFEMLDGHGD 622 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + E L C C + CP ++ Sbjct: 623 GAIRDGWRSQEVKDALDLCLACKGCKKDCPADVD 656 >gi|229518065|ref|ZP_04407509.1| electron transport complex protein RnfC [Vibrio cholerae RC9] gi|229344780|gb|EEO09754.1| electron transport complex protein RnfC [Vibrio cholerae RC9] Length = 725 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E LD L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELD-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|170288502|ref|YP_001738740.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga sp. RQ2] gi|170176005|gb|ACB09057.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga sp. RQ2] Length = 435 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP LQ Y + S + E + Sbjct: 355 PQPQKPCIRCSECVQVCPM-------------NLQPYLLYLLSTKKKYDEAV-----ENG 396 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C +CT +CP + + I K Sbjct: 397 LMDCIECGSCTYTCPSKIEHVRYIKLAK 424 >gi|32141279|ref|NP_733680.1| oxidase [Streptomyces coelicolor A3(2)] gi|24429549|emb|CAD55242.1| putative oxidase [Streptomyces coelicolor A3(2)] Length = 1047 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 36/154 (23%), Gaps = 12/154 (7%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + PL M+ K VV R W Sbjct: 507 MYGDRLVEAFGRLKAVFDPLDRMNPGK--VVAPYGLDDNLRLGGDWAP--FEPRDLHFRF 562 Query: 157 SHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGPAILLQAYRWLIDSR-D 208 H+ CV C CPSY + + ++D D Sbjct: 563 PHDGGSFSQAANRCVGVGKCRQHTSDGTVMCPSYQVTREEEHSTRGRARLLFEMLDGHGD 622 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + E L C C + CP ++ Sbjct: 623 GAIRDGWRSQEVKDALDLCLACKGCKKDCPADVD 656 >gi|289522771|ref|ZP_06439625.1| oxidoreductase, aldo/keto reductase family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504607|gb|EFD25771.1| oxidoreductase, aldo/keto reductase family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 379 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 40/140 (28%), Gaps = 21/140 (15%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + ++ ++ + +++ + K + C C C CP + Sbjct: 246 MSSFEQMADNVSVMKNFVPLNDEE--MRIIKESVEIIKKKVVIPCTACRYCVDGCPKHIA 303 Query: 186 NSDRYL-------GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + +Q + + +R+ + C C + CP Sbjct: 304 IPEYFAIFNERKTFGPTPVQVFFYNNLAREHGKAS------------DCIACGQCEEHCP 351 Query: 239 KGLNPAKAIAKIKMMLLDRK 258 + + A+ + L K Sbjct: 352 QHIKIIDALRDVAKELEAEK 371 >gi|212702903|ref|ZP_03311031.1| hypothetical protein DESPIG_00936 [Desulfovibrio piger ATCC 29098] gi|212673765|gb|EEB34248.1| hypothetical protein DESPIG_00936 [Desulfovibrio piger ATCC 29098] Length = 639 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 22/116 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPS------YWWNSDRYLGPAILLQAYRWLI---- 204 LQ + + C+ C C+ CP+ D G + ++ Sbjct: 224 LQGFDHPVWEEITPTCIRCTGCTAVCPTCTCFQFNEERLDAQSGRRVRVKDSCQTAGFTR 283 Query: 205 -----DSRDEFQGER------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + R + R L ++D F C C CP G++ + IA Sbjct: 284 NAGWHNPRSKAAAVRHRIMDKLVYIQDRFGKKGCVGCGRCIDVCPAGIDI-RKIAD 338 >gi|207727897|ref|YP_002256291.1| putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein (partial homology c terminus) [Ralstonia solanacearum MolK2] gi|206591139|emb|CAQ56751.1| putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein (partial homology c terminus) [Ralstonia solanacearum MolK2] Length = 765 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + D Sbjct: 281 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSVKHWEEFADV 340 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 341 G--DHCTVCHKCATPCPVKIDFGDVSMNMRNLL 371 >gi|197121730|ref|YP_002133681.1| hypothetical protein AnaeK_1320 [Anaeromyxobacter sp. K] gi|196171579|gb|ACG72552.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 164 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 23/95 (24%), Gaps = 9/95 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 DR+ C+ C C C L + + R Sbjct: 49 DREVDQAASACISCGLCEPGCDLARAAP----AVRALGLHAAFRLYGRAGPDLALAAGAL 104 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C +C CP G+ ++ + + Sbjct: 105 G-----ACDGCGDCEARCPVGVPISRVVRALHARA 134 >gi|297621063|ref|YP_003709200.1| FAD linked oxidase domain-containing protein [Waddlia chondrophila WSU 86-1044] gi|297376364|gb|ADI38194.1| FAD linked oxidase domain-containing protein [Waddlia chondrophila WSU 86-1044] Length = 916 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 31/106 (29%), Gaps = 10/106 (9%) Query: 154 LLQSHEDRQKIDGLYECVMCACCS----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 L ++ C A C T CPS+ Y Q R ++ Sbjct: 508 FLDFSKEGGIELSADLCNGNAQCRKKEGTMCPSFQATGREYDSTRARAQTLRGILHGSLS 567 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 G L L C C CP ++ +AK+K L Sbjct: 568 ADGLASKELY--HVLDLCLQCKGCKSECPSQVD----MAKMKTEFL 607 >gi|149916439|ref|ZP_01904958.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. AzwK-3b] gi|149809709|gb|EDM69563.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. AzwK-3b] Length = 478 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 21/81 (25%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + + + W + R D ++ Sbjct: 206 FVFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYREWRGEPRKNS-----DEVKAGEEQ 260 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 261 GDCIDCMACVNVCPVGIDIRD 281 >gi|325971162|ref|YP_004247353.1| electron transport complex, RnfABCDGE type, C subunit [Spirochaeta sp. Buddy] gi|324026400|gb|ADY13159.1| electron transport complex, RnfABCDGE type, C subunit [Spirochaeta sp. Buddy] Length = 436 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 18/93 (19%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C +CP + YR + + E + L Sbjct: 362 RTTACLNCGRCVAACPIGLM----------PAKLYRLINNGHYEEAMQ--------TSLM 403 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C+ CP L + K + +K Sbjct: 404 DCKECGCCSFVCPAHLPLVHTMKTGKKLGRKKK 436 >gi|288935781|ref|YP_003439840.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Klebsiella variicola At-22] gi|288890490|gb|ADC58808.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Klebsiella variicola At-22] Length = 1175 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|260220426|emb|CBA27952.1| Formate dehydrogenase subunit alpha [Curvibacter putative symbiont of Hydra magnipapillata] Length = 992 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 69/255 (27%), Gaps = 51/255 (20%) Query: 39 NKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC------REGICGSCGMNI 92 T LD + +G +K + + C +G C +C + I Sbjct: 34 KPAEVMPQTVEFKLDQQTVVAFEGESILKAAKRHGIDIPHLCYKDGLRADGNCRACVVEI 93 Query: 93 DGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIK------------------DLVVDMSHFY 133 G TLA + + K D Sbjct: 94 KGERTLAPSCCRSATAGMEVQAKSERAVKSQKMVLEMLLSDMPDEGYKWNDSAAATPDAS 153 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQ--------KIDGLYECVMCACCSTSCPSYWW 185 QH + W + EL ++ L C+ C C +C Sbjct: 154 QQHGELSGWAARMDVSVRPELKALRREQPKADVSHPAMAVNLDACIQCNRCVRACRESQV 213 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPA 244 N ++ A R E + +L DP C C Q+CP G L P Sbjct: 214 ND-------VIGYANR-------GAHAEIVFDLNDPMADSTCVACGECVQACPTGALMPK 259 Query: 245 KAIAKIKMMLLDRKI 259 I ++D+K+ Sbjct: 260 SHIG---TQVVDKKV 271 >gi|262042923|ref|ZP_06016068.1| pyruvate-ferredoxin oxidoreductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039763|gb|EEW40889.1| pyruvate-ferredoxin oxidoreductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 1175 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|297544478|ref|YP_003676780.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842253|gb|ADH60769.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 506 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 19/104 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D++ +C+ C C CP Y SD L P I A + + E L + Sbjct: 127 DKRAHIDYDKCIECGRCKDVCP-YNAISDT-LRPCIRSCAAKAI------TMDEELKAVI 178 Query: 220 DPFRLYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 + + C + CT +CP G ++ +AI K + Sbjct: 179 NYEK---CTSCGMCTLACPFGAITDKSYIVDIIRAIKSGKKVYA 219 >gi|302879696|ref|YP_003848260.1| hypothetical protein Galf_2497 [Gallionella capsiferriformans ES-2] gi|302582485|gb|ADL56496.1| Protein of unknown function DUF3683 [Gallionella capsiferriformans ES-2] Length = 1273 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + D D Sbjct: 805 DCLRCGKCKPVCTTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIQHFDEFNDV 864 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP ++ ++ L + Sbjct: 865 --ADHCTVCHKCLNPCPVNIDFGDVSMAMRNFLRKQG 899 >gi|238894465|ref|YP_002919199.1| putative oxidoreductase Fe-S subunit [Klebsiella pneumoniae NTUH-K2044] gi|238546781|dbj|BAH63132.1| putative oxidoreductase Fe-S subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 1175 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|206575856|ref|YP_002238852.1| putative pyruvate:ferredoxin (flavodoxin) oxidoreductase [Klebsiella pneumoniae 342] gi|206564914|gb|ACI06690.1| putative pyruvate:ferredoxin (flavodoxin) oxidoreductase [Klebsiella pneumoniae 342] Length = 1175 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|152969999|ref|YP_001335108.1| putative oxidoreductase, Fe-S subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954848|gb|ABR76878.1| putative oxidoreductase, Fe-S subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 1175 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKV 782 >gi|150399358|ref|YP_001323125.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus vannielii SB] gi|150012061|gb|ABR54513.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus vannielii SB] Length = 387 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 10/112 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPA 194 +E + + + K+ L+ + Y C+ C C +CP Sbjct: 251 AKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVC--------FCK 302 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 ++ + + C C CP + A+ Sbjct: 303 ECALEAEYIDRGEIPPNPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARI 354 >gi|260596726|ref|YP_003209297.1| putative formate dehydrogenase yrhE [Cronobacter turicensis z3032] gi|260215903|emb|CBA28461.1| Putative formate dehydrogenase yrhE [Cronobacter turicensis z3032] Length = 990 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 19/105 (18%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H I+ + P +C++C C +C + + L Sbjct: 118 DMHIPIQRYEYQRKPYVKDHSNPF-----YTYDPDQCILCGRCVEACQNVEV--NETLSI 170 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D D G C + +C CP Sbjct: 171 DYTMAHPRVLWDGGDTIAGS------------SCVSCGHCVTVCP 203 >gi|304315261|ref|YP_003850408.1| F420-non-reducing hydrogenase, subunit B, polyferredoxin [Methanothermobacter marburgensis str. Marburg] gi|313104135|sp|P60232|MVHB_METTM RecName: Full=Polyferredoxin protein mvhB gi|302588720|gb|ADL59095.1| F420-non-reducing hydrogenase, subunit B, polyferredoxin [Methanothermobacter marburgensis str. Marburg] Length = 412 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 23/149 (15%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T + + ++ C C C CP + D LG Sbjct: 209 FELDEEACIGCNTCVEACPGDFIVPKSSNLTVELPAICTACGLCEQLCPVDAIDLDVELG 268 Query: 193 PAILLQAYRWLID----------------------SRDEFQGERLDNLEDPFRLYRCHTI 230 PA + D +R+ + + +++ C Sbjct: 269 PAKPASEEGLVWDEGKCDFIGACANICPNDAIRVVTREGMKLPDNEKVDEEPSFAMCTRC 328 Query: 231 MNCTQSCPKG-LNPAKAIAKIKMMLLDRK 258 CT +CPKG L+ I ++ RK Sbjct: 329 GACTMACPKGALSLVDMDKVIDGEVVKRK 357 >gi|120612293|ref|YP_971971.1| FAD linked oxidase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120590757|gb|ABM34197.1| FAD linked oxidase domain protein [Acidovorax citrulli AAC00-1] Length = 1304 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 834 DCLRCGKCKPVCSTHVPRASLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 893 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 894 --ADHCTVCHKCYTPCPVKIDFGDVTMNMRNLL 924 >gi|260592305|ref|ZP_05857763.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella veroralis F0319] gi|260535755|gb|EEX18372.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella veroralis F0319] Length = 1191 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C C+ CP + + + D Sbjct: 675 YDKRGVAAFVPAWDAENCIQCNKCAFVCPHACIRP----FVLDEAEKAGFNEPTLDILAP 730 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 731 KQLKGMQFRIEVSVLDCTGCGNCADVCP 758 >gi|163854772|ref|YP_001629070.1| FAD/iron-sulfur cluster-binding domain-containing protein [Bordetella petrii DSM 12804] gi|163258500|emb|CAP40799.1| FAD/iron-sulfur cluster-binding domain protein [Bordetella petrii] Length = 1319 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLKHWEEFEDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCYNPCPVDIDFGDVSMSMRALL 943 >gi|317471774|ref|ZP_07931113.1| electron transport complex [Anaerostipes sp. 3_2_56FAA] gi|316900751|gb|EFV22726.1| electron transport complex [Anaerostipes sp. 3_2_56FAA] Length = 438 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D C+ C C + CP + + + + A D E Sbjct: 350 LAFTKDPVSAVEPSNCINCGRCVSVCPQ------KLMPARLSVLA--------DNNNFEA 395 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C+ CP N A+++ + +L + Sbjct: 396 FEALHGDE----CVECGCCSFICPAKRNLAQSMKTGRKQVLANR 435 >gi|260431153|ref|ZP_05785124.1| formate dehydrogenase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260414981|gb|EEX08240.1| formate dehydrogenase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 927 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 15/112 (13%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPSYWWNSD 188 SHF+ R + K +++ + L C+ C C +C N Sbjct: 113 SHFWDMARLNDVSDSRFPAKEPEKIPLLDDSHVAMRVNLDACINCNLCVRACREVQVND- 171 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G A + + D DP C C Q+CP G Sbjct: 172 -VIGMAGRGHTAQVVFD------------QNDPMGESTCVACGECVQACPTG 210 >gi|256003828|ref|ZP_05428815.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum DSM 2360] gi|255992166|gb|EEU02261.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum DSM 2360] Length = 403 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 22/126 (17%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + L T K LL E + C+ C C +CP Sbjct: 293 MMGIAQYTLDTPVLKHTNALLAFDETTAVLPKEQACIRCGRCVRACPMNLLPL------Y 346 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI----AKI 250 + + R I+ + + + C +C CP +N ++I A++ Sbjct: 347 LNNNSIRGNIEEL------------NRYHVMDCIECGSCAYVCPAKINLVQSIRLGKAQV 394 Query: 251 KMMLLD 256 + Sbjct: 395 RQAAAK 400 >gi|167746962|ref|ZP_02419089.1| hypothetical protein ANACAC_01674 [Anaerostipes caccae DSM 14662] gi|167653922|gb|EDR98051.1| hypothetical protein ANACAC_01674 [Anaerostipes caccae DSM 14662] Length = 438 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L +D C+ C C + CP + + + + A D E Sbjct: 350 LAFTKDPVSAVEPSNCINCGRCVSVCPQ------KLMPARLSVLA--------DNNNFEA 395 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + L C C+ CP N A+++ + +L + Sbjct: 396 FEALHGDE----CVECGCCSFICPAKRNLAQSMKTGRKQVLANR 435 >gi|148269816|ref|YP_001244276.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga petrophila RKU-1] gi|147735360|gb|ABQ46700.1| electron transport complex, RnfABCDGE type, C subunit [Thermotoga petrophila RKU-1] Length = 435 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C+ C+ C CP LQ Y + S + E + Sbjct: 355 PQPQKPCIRCSECVQVCPM-------------NLQPYLLYLLSTKKKYDEAV-----ENG 396 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C +CT +CP + + I K Sbjct: 397 LMDCIECGSCTYTCPSKIEHVRYIKLAK 424 >gi|325954458|ref|YP_004238118.1| cytochrome C oxidase accessory protein CcoG [Weeksella virosa DSM 16922] gi|323437076|gb|ADX67540.1| cytochrome c oxidase accessory protein CcoG [Weeksella virosa DSM 16922] Length = 484 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 20/85 (23%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ++ C+ CP I + + R R + Sbjct: 218 FYFVFTWFREQACTLVCPYGRLQGVLIDSHTINVAYDYRRGEGRIGRAKFRKNEDRKAAG 277 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIA 248 C C CP G++ I Sbjct: 278 KGDCIDCGQCVVVCPTGIDIRNGIQ 302 >gi|260891188|ref|ZP_05902451.1| electron transport complex, RnfABCDGE type, C subunit [Leptotrichia hofstadii F0254] gi|260859215|gb|EEX73715.1| electron transport complex, RnfABCDGE type, C subunit [Leptotrichia hofstadii F0254] Length = 464 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 18/79 (22%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP + D ++ + E++ + C Sbjct: 390 NCISCGYCVEACPMNLMPFE--------------FADYYEKGKYEKMVKAN----IQNCI 431 Query: 229 TIMNCTQSCPKGLNPAKAI 247 C CP + ++I Sbjct: 432 ECGACEFVCPSRVPLMESI 450 >gi|21228191|ref|NP_634113.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina mazei Go1] gi|2494432|sp|Q49161|ACDA1_METMA RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 1; Short=ACDS complex subunit alpha 1; AltName: Full=ACDS complex carbon monoxide dehydrogenase 1; Short=ACDS CODH 1 gi|609518|gb|AAC37044.1| carbon monoxide dehydrogenase large subunit [Methanosarcina mazei Go1] gi|20906642|gb|AAM31785.1| CO dehydrogenase/acetyl-COA synthase alpha subunit [Methanosarcina mazei Go1] Length = 806 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 21/127 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKE--LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 Y + I L + + + D Q + + +C C C +CP + Sbjct: 378 YEKLGEISVRLAQEMHPIREAAGVREIPSDEQLKEWVDKCADCGACYLACPIELDIPEAM 437 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +Y L++L D C C Q C K + I K Sbjct: 438 KFAKQGDFSY--------------LEDLHD-----ACIGCRRCEQVCKKEIPILSVIEKA 478 Query: 251 KMMLLDR 257 ++ Sbjct: 479 SQKIIAE 485 >gi|148643465|ref|YP_001273978.1| formate dehydrogenase, beta subunit, FdhB [Methanobrevibacter smithii ATCC 35061] gi|222445701|ref|ZP_03608216.1| hypothetical protein METSMIALI_01342 [Methanobrevibacter smithii DSM 2375] gi|261349750|ref|ZP_05975167.1| formate dehydrogenase beta chain [Methanobrevibacter smithii DSM 2374] gi|89953724|gb|ABD83340.1| FdhB [Methanobrevibacter smithii] gi|148552482|gb|ABQ87610.1| formate dehydrogenase, beta subunit, FdhB [Methanobrevibacter smithii ATCC 35061] gi|222435266|gb|EEE42431.1| hypothetical protein METSMIALI_01342 [Methanobrevibacter smithii DSM 2375] gi|288861705|gb|EFC94003.1| formate dehydrogenase beta chain [Methanobrevibacter smithii DSM 2374] Length = 401 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 20/99 (20%) Query: 163 KIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 D +C+ C C +CP ++ P A + +R Sbjct: 288 YEDEFSKCMKCYGCREACPLCFCDDCCLEAEGPEWV-PGGYTPAAPFFHLTRMV------ 340 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C CT+ CP + AK + + + Sbjct: 341 ------HMVDSCTNCGQCTEVCPCEIPVAKVWSTVNNKI 373 >gi|332830196|gb|EGK02824.1| NADH-quinone oxidoreductase subunit I [Dysgonomonas gadei ATCC BAA-286] Length = 178 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 +++ + + + HF+ + +I+ + + H + G C C C+ +C Sbjct: 32 IVQGMWITIKHFFKKKNTIQY--PEQQREFSPVYRGQHVLMRDDQGRERCTACGLCALAC 89 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E+ + L RC C +CPK Sbjct: 90 PAEAITMVAAERKKGEEHLYR----------EEKYAATYEINML-RCIFCGLCEDACPK- 137 Query: 241 LNPAKAIAKIKMMLL 255 +AI K LL Sbjct: 138 ----EAIFLTKSKLL 148 >gi|300703650|ref|YP_003745252.1| NADH-quinone oxidoreductase subunit i [Ralstonia solanacearum CFBP2957] gi|299071313|emb|CBJ42631.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CFBP2957] Length = 163 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + + H R+ +G C+ C C CP+ + Sbjct: 31 RKITVFFPEEKTPLSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIES------- 83 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D RD+ D L +C C ++CP Sbjct: 84 --------DQRDDGTRRTTRYDID---LTKCIFCGFCEEACPVD 116 >gi|188584959|ref|YP_001916504.1| aldo/keto reductase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349646|gb|ACB83916.1| aldo/keto reductase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 381 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 2/137 (1%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + ++ M+ F ++ T +E L++ ED ++I + C C Sbjct: 243 NYPEVTTVLSGMNSFKQLKENMTIATDTYPNSMTREELKTIEDVKEIYKERIQIGCTDCR 302 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 P + + L L +D+ + ++ RC C Q C Sbjct: 303 YCLP--CEPENIPISSIFNLYNELHLFKDQDKAKQTYQKLIDGERDGGRCIECGACEQEC 360 Query: 238 PKGLNPAKAIAKIKMML 254 P+ ++ + KI L Sbjct: 361 PQDIHIRSWLNKIHKEL 377 >gi|78042839|ref|YP_360066.1| putative heterodisulfide reductase subunit C [Carboxydothermus hydrogenoformans Z-2901] gi|77994954|gb|ABB13853.1| putative heterodisulfide reductase, C subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 177 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 13/96 (13%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C C CS CP YL ++ D + L Sbjct: 15 HQPVSRCFQCQKCSLGCPVAEEMD--YLPHQVV-----------DLINKNLSEKLIGSNA 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C + C Q CP G++ +K + K+ Sbjct: 62 SWICVSCKTCVQRCPNGIDIGAIHDALKNIHFKHKL 97 >gi|328952778|ref|YP_004370112.1| formate dehydrogenase, alpha subunit [Desulfobacca acetoxidans DSM 11109] gi|328453102|gb|AEB08931.1| formate dehydrogenase, alpha subunit [Desulfobacca acetoxidans DSM 11109] Length = 898 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 14/92 (15%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P L +C+MC C +C N+ +G + DS Sbjct: 129 PPETPYHLEDNKNLIRRDLSKCIMCGRCVRACKERQVNNAISIGYRGSHNKIVTMADS-- 186 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + C C Q+CP G Sbjct: 187 ------------SYGDSDCVFCGECVQACPVG 206 >gi|291613546|ref|YP_003523703.1| NADH-quinone oxidoreductase, chain I [Sideroxydans lithotrophicus ES-1] gi|291583658|gb|ADE11316.1| NADH-quinone oxidoreductase, chain I [Sideroxydans lithotrophicus ES-1] Length = 162 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 25/133 (18%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + ++K + V +F+++H ++E + H R+ +G C+ C C Sbjct: 14 LELLKGMSVTGRYFFARHITVEY--PEEKTPQSFRFRGLHAQRRYPNGEERCIGCKLCEA 71 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID L +C C +SCP Sbjct: 72 VCPALAIKIEVAEREDGTRRTTRYDID------------------LVKCIFCGFCEESCP 113 Query: 239 KGLNPAKAIAKIK 251 AI + + Sbjct: 114 V-----DAIVETR 121 >gi|222099416|ref|YP_002533984.1| Electron transport complex protein [Thermotoga neapolitana DSM 4359] gi|221571806|gb|ACM22618.1| Electron transport complex protein [Thermotoga neapolitana DSM 4359] Length = 435 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 18/83 (21%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C+ C CP YL +R + L C Sbjct: 360 PCIRCSECVQVCPMNLQPYLLYL------------------LSTKRKYDEAVENGLMDCI 401 Query: 229 TIMNCTQSCPKGLNPAKAIAKIK 251 +CT +CP + + I K Sbjct: 402 ECGSCTYTCPSKIEHVRYIKLAK 424 >gi|260574211|ref|ZP_05842216.1| cytochrome c oxidase accessory protein CcoG [Rhodobacter sp. SW2] gi|259023677|gb|EEW26968.1| cytochrome c oxidase accessory protein CcoG [Rhodobacter sp. SW2] Length = 476 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 9/81 (11%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQG-ERLDNLEDPF 222 L C +CP + L L AYR W + R + E + N D Sbjct: 204 FFLAGFFREQICIYACP-WPRIQAAMLDEDSLTVAYRSWRGEPRGKLHKGEIVPNQGD-- 260 Query: 223 RLYRCHTIMNCTQSCPKGLNP 243 C M C CP G++ Sbjct: 261 ----CIDCMACVNVCPMGIDI 277 >gi|309390313|gb|ADO78193.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Halanaerobium praevalens DSM 2228] Length = 1178 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P ++ + + C+ C CS +CP +L Sbjct: 667 HFPPGLSQYEKRGIAINVPDWKIDTCIQCNQCSLACP--HAVIRPFLLNEEEAANAPEGF 724 Query: 205 DSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKG 240 ++ D + L+ LE ++ Y C C + CP Sbjct: 725 ETLDARGKQ-LEGLEYKIQVSPYDCTGCGVCAEVCPVD 761 >gi|257469747|ref|ZP_05633839.1| heterodisulfide reductase subunit C-like protein [Fusobacterium ulcerans ATCC 49185] gi|317063979|ref|ZP_07928464.1| 4Fe-4S ferredoxin [Fusobacterium ulcerans ATCC 49185] gi|313689655|gb|EFS26490.1| 4Fe-4S ferredoxin [Fusobacterium ulcerans ATCC 49185] Length = 137 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 40/99 (40%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C CS CP+ + P +++ + ++ ++ Sbjct: 19 EEISKEKTANCMQCGKCSAGCPAAEGMD---ILPHQVIRHLQM----------GDVETIK 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C + C CP+ ++ K + +++ ++ +K Sbjct: 66 NSKTIWTCASCFTCASRCPRNVDLCKLMEAVRLTIVRKK 104 >gi|188528055|ref|YP_001910742.1| NADH dehydrogenase subunit G [Helicobacter pylori Shi470] gi|188144295|gb|ACD48712.1| NADH dehydrogenase subunit G [Helicobacter pylori Shi470] Length = 844 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+MC C T+C + L+A + + + D+F+ + Sbjct: 133 WAQALYDPNLCIMCERCVTTCKDNVGEDN--------LKATKANLHAPDKFKDR---MSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|118593605|ref|ZP_01550982.1| D-lactate dehydrogenase (cytochrome) [Stappia aggregata IAM 12614] gi|118433823|gb|EAV40483.1| D-lactate dehydrogenase (cytochrome) [Stappia aggregata IAM 12614] Length = 980 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 11/96 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY + + R + + D + + Sbjct: 569 EMCNNNGACRKLAGGTMCPSYRATRNERDLTRGRANSLRLALSGQLGPDALTSDEMMETL 628 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C + C + CP G++ +AK+K+ +L + Sbjct: 629 KL--CVSCKGCKRECPTGVD----MAKMKIEVLAAR 658 >gi|111025096|ref|YP_707516.1| D-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] gi|110824075|gb|ABG99358.1| D-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] Length = 1023 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 33/117 (28%), Gaps = 7/117 (5%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-----CPSYWW 185 H Y ++ + +PA ++ + CV C CPSY Sbjct: 536 HPYRLDENLRQGTHYLPLEPATHFAYPDDEHRFSRAAARCVGVGKCRGHESGVMCPSYRA 595 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++ E + ++ L C C CP ++ Sbjct: 596 TGEEEHSTRGRARLLFEMLQG--EVITDGWKSVAVRDALDLCLACKGCLSDCPVNVD 650 >gi|148257004|ref|YP_001241589.1| D-lactate dehydrogenase / anaerobic glycerol-3-phosphate dehydrogenase subunit C [Bradyrhizobium sp. BTAi1] gi|146409177|gb|ABQ37683.1| D-lactate dehydrogenase / Anaerobic glycerol-3-phosphate dehydrogenase subunit C [Bradyrhizobium sp. BTAi1] Length = 984 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 35/124 (28%), Gaps = 11/124 (8%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPA 194 + + C C CPSY + Sbjct: 542 PDYRIDDIKTVLDWSAYPGAAGGFQGAVEMCNNNGACRKLDGGVMCPSYRATRNEKDVTR 601 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 R I + D + + +L C + C + CP G++ +AK+K+ + Sbjct: 602 GRANTLRLAISGQLGPGALSSDEMMETLKL--CVSCKACRRECPTGVD----MAKMKIEV 655 Query: 255 LDRK 258 L + Sbjct: 656 LAAR 659 >gi|118581920|ref|YP_903170.1| formate dehydrogenase subunit alpha [Pelobacter propionicus DSM 2379] gi|118504630|gb|ABL01113.1| NAD-dependent formate dehydrogenase catalytic subunit [Pelobacter propionicus DSM 2379] Length = 904 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 59/221 (26%), Gaps = 40/221 (18%) Query: 45 MDTYYVD---LDNCGPMVLDGLLYIKNKIDPTLTL-----RRSCREGICGSCGMNIDGTN 96 M VD ++ + PTL + S C C + + G Sbjct: 1 MVHVTVDGRVVEIPKGSAVIDATKKAGAKIPTLCFLELHKKMSGLNSSCRVCVVEVAGRK 60 Query: 97 TLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 LA G + ++ K ++ + + Q I + + Sbjct: 61 NLAAACSTPVTDGMDIITASERVIAARKTMIELLLSDHEQDCLICGKAGNCTLQDLCFEY 120 Query: 156 QSHEDRQ---------------KIDGLYECVMCACCSTSCPSYW-WNSDRYLGPAILLQA 199 E R + +CV C C T+C +Y + + G ++ Sbjct: 121 DIKESRYRGMMNSFPLDESNEFYSRNMNKCVKCRRCVTTCSAYQCSEAIDFAGRGFGVRV 180 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +D R C + NC CP G Sbjct: 181 A---------------APFDDQIRNSSCVSCGNCVSVCPVG 206 >gi|257064475|ref|YP_003144147.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792128|gb|ACV22798.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 284 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 11/95 (11%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C CP + ++ + R +L Sbjct: 165 YFENMYASCIRCYACRDVCP-CCTCRECFVDQRREGWVGKQNN-----VAENRFYSLTRV 218 Query: 222 FRLY-RCHTIMNCTQSCPKGLNPAKA----IAKIK 251 + RC C ++CP GL K I + Sbjct: 219 MHIGDRCIECGECERACPMGLPLMKLNRKVIQDMN 253 >gi|20093197|ref|NP_619272.1| hypothetical protein MA4410 [Methanosarcina acetivorans C2A] gi|19918544|gb|AAM07752.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 1016 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 6/97 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + Y C C C + C Y+ P + + R++ Sbjct: 498 AEVAELAYSCSQCGYCVSECDQYYGRGWESQSPRGKWFFIKEYLAGREKLDQR------Q 551 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C T C C + A ++ L++ Sbjct: 552 TNTFLACTTCQMCDARCELDMPIEHAWMTMRGKLVEE 588 >gi|332528530|ref|ZP_08404518.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] gi|332042041|gb|EGI78379.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] Length = 497 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 23/76 (30%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S + +++ +SR + L C Sbjct: 224 AGFMREQVCKYMCPYARFQSAMFDKDTLIVSYDEKRGESRGARSRQADARALKAQGLGDC 283 Query: 228 HTIMNCTQSCPKGLNP 243 C Q CP G++ Sbjct: 284 IDCTMCVQVCPTGIDI 299 >gi|315607997|ref|ZP_07882990.1| pyruvate:ferredoxin oxidoreductase [Prevotella buccae ATCC 33574] gi|315250466|gb|EFU30462.1| pyruvate:ferredoxin oxidoreductase [Prevotella buccae ATCC 33574] Length = 1195 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C CS CP + + + D Sbjct: 677 YDKRGVAAFVPTWASENCIQCNKCSYVCPHACIRP----FVLDENEKAGFNEPTLDVLAP 732 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 733 KQLKGMQFRIEVSVLDCTGCGNCADVCP 760 >gi|312136949|ref|YP_004004286.1| formate dehydrogenase, beta subunit (f420) [Methanothermus fervidus DSM 2088] gi|311224668|gb|ADP77524.1| formate dehydrogenase, beta subunit (F420) [Methanothermus fervidus DSM 2088] Length = 380 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 59/189 (31%), Gaps = 18/189 (9%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIK----DLVVDMSHFYS 134 R +C C M I +AC + I V +++ D +++ Sbjct: 179 GRRDMCQRCEMMIPRNADVACGNWGADEGWTFIEVVTEKGKKLVENAINDGFIEVKSPSD 238 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDR------QKIDGLYECVMCACCSTSCPSYWWNSD 188 + +I ++ K AK + + D+ C+ C C +CP + Sbjct: 239 KAITIRSKIEKSMIKMAKNFKEKYLDKEYPKLEDWEKYFKRCIKCYACRDACPICFCEEC 298 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L + + F G RL ++ + C C CP + A+ Sbjct: 299 E-LEKEWYKEPENVPPNPL-TFHGIRLWHMG-----FSCINCGQCEDVCPMDIPVARLFH 351 Query: 249 KIKMMLLDR 257 KI+ Sbjct: 352 KIQEKYRKE 360 >gi|288924962|ref|ZP_06418898.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella buccae D17] gi|288338152|gb|EFC76502.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella buccae D17] Length = 1193 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C CS CP + + + D Sbjct: 675 YDKRGVAAFVPTWASENCIQCNKCSYVCPHACIRP----FVLDENEKAGFNEPTLDVLAP 730 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 731 KQLKGMQFRIEVSVLDCTGCGNCADVCP 758 >gi|118475651|ref|YP_892701.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter fetus subsp. fetus 82-40] gi|118414877|gb|ABK83297.1| iron-sulfur cluster-binding domain protein [Campylobacter fetus subsp. fetus 82-40] Length = 420 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 24/98 (24%), Gaps = 6/98 (6%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + CV C C +C + + D P L E D Sbjct: 1 MQKYNFNTVSDACVKCGKCKPNCTIFKISGDEVRSPRGFLDLLGAYNRGELELDKNAKDI 60 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C NC CP L I ++ + Sbjct: 61 ------FESCFLCTNCVSECPSSLATDTMIENVRRDIA 92 >gi|27381152|ref|NP_772681.1| glycolate oxidase [Bradyrhizobium japonicum USDA 110] gi|27354319|dbj|BAC51306.1| blr6041 [Bradyrhizobium japonicum USDA 110] Length = 991 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 11/96 (11%) Query: 168 YECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY + R I + D + + Sbjct: 566 EMCNNNGACRKLEGGVMCPSYRATRNEKDVTRGRANTLRLAISGQLGADALSSDEMMETL 625 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C + C CP G++ +AK+K+ +L + Sbjct: 626 KL--CVSCKACRHECPTGVD----MAKMKIEVLAAR 655 >gi|314934357|ref|ZP_07841716.1| formate dehydrogenase, alpha subunit [Staphylococcus caprae C87] gi|313652287|gb|EFS16050.1| formate dehydrogenase, alpha subunit [Staphylococcus caprae C87] Length = 984 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 60/215 (27%), Gaps = 35/215 (16%) Query: 45 MDTYYV------DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNT 97 M + V D L + ++ P + S C +C + IDG Sbjct: 1 MQEHLVVTLDATDYLVEPGTNLLEFIRSRDIFVPAICYNESMGPIQTCDTCMVEIDGEIA 60 Query: 98 LACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW-L 143 AC D+K + L + + + H +++ W + Sbjct: 61 RACGTTIDRPMNVKTDNNDVKSSQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDEWGI 120 Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + + ++ + +C++C C +C N + Sbjct: 121 QHQTYEYKEKPYEKDYGPFYRYDPDQCILCGRCVEACQDIEVNETISIDW---------- 170 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D + + + P C + C CP Sbjct: 171 ----DREHPRVIWDNDVPINESSCVSCGQCATVCP 201 >gi|312879382|ref|ZP_07739182.1| aldo/keto reductase [Aminomonas paucivorans DSM 12260] gi|310782673|gb|EFQ23071.1| aldo/keto reductase [Aminomonas paucivorans DSM 12260] Length = 400 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 31/105 (29%), Gaps = 7/105 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + L C C C CP +D YL + + Sbjct: 296 EALSTRILAGCTSCGYCLPFCPVGVQIPMNLALLNDLYLVAGHKVPTMDRSLMKAYYGPF 355 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 R D L R C C CP+GL+ +A+ L +R Sbjct: 356 IRYDRLLPSERAEACVGCGACAAHCPQGLDLPGLLARAAEALRER 400 >gi|332981731|ref|YP_004463172.1| RnfABCDGE type electron transport complex subunit C [Mahella australiensis 50-1 BON] gi|332699409|gb|AEE96350.1| electron transport complex, RnfABCDGE type, C subunit [Mahella australiensis 50-1 BON] Length = 442 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + L K +L E+ + + C+ CA C +CP L Sbjct: 333 MMGIAQYSLDVPVIKGTSGILVLTEEEAQAPQVQVCIRCARCVEACP------MGLLPLY 386 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 I A + D + E+ + ++ C C+ CP ++I K + Sbjct: 387 ISRYALAGMYD-----KAEQYNAMD-------CIECGCCSFECPAKRPLVESIRLAKRAI 434 Query: 255 LDRK 258 + Sbjct: 435 AANR 438 >gi|332525577|ref|ZP_08401732.1| FAD linked oxidase domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332109142|gb|EGJ10065.1| FAD linked oxidase domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 1312 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 841 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLRHWEEFEDV 900 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 901 SE--HCTVCHKCLTPCPVKIDFGDVSMNMRNLL 931 >gi|257437722|ref|ZP_05613477.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Faecalibacterium prausnitzii A2-165] gi|257200029|gb|EEU98313.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Faecalibacterium prausnitzii A2-165] Length = 1181 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 24/86 (27%), Gaps = 8/86 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C+ C + A L A SRD + Sbjct: 690 PEWDASKCVGCNQCAFVCS--HATIRPFQLTADELAAAPAQTKSRDNRPANEYKFVMAVS 747 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C C CP KAIA Sbjct: 748 PL-DCMGCGECVTVCP-----TKAIA 767 >gi|239945712|ref|ZP_04697649.1| putative iron-sulfur protein [Streptomyces roseosporus NRRL 15998] gi|239992182|ref|ZP_04712846.1| putative iron-sulfur protein [Streptomyces roseosporus NRRL 11379] gi|291449171|ref|ZP_06588561.1| iron-sulfur cluster binding protein [Streptomyces roseosporus NRRL 15998] gi|291352118|gb|EFE79022.1| iron-sulfur cluster binding protein [Streptomyces roseosporus NRRL 15998] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YR 226 C+ C+ C CP Y G L + +DP Y Sbjct: 329 NCIRCSACLNVCPVYERTGGHAYGSTYPGPIGAVLTPQLAGMHAAK----DDPNSSLPYA 384 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C +CP ++ + +++ Sbjct: 385 SSLCGACFDACPVKIDVPSLLVELRHQ 411 >gi|88603272|ref|YP_503450.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein [Methanospirillum hungatei JF-1] gi|88188734|gb|ABD41731.1| formate dehydrogenase, beta subunit (F420) [Methanospirillum hungatei JF-1] Length = 383 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 7/90 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C CP ++G I S F R ++ D Sbjct: 283 FIKKETSRCIKCYSCIEKCPVCISTP--FVGRPESYMVRPGYIPSDPMFHLRRFASISD- 339 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + A I+ Sbjct: 340 ----SCVNCGQCEELCPVEIPLALISHAIR 365 >gi|332981045|ref|YP_004462486.1| aldo/keto reductase [Mahella australiensis 50-1 BON] gi|332698723|gb|AEE95664.1| aldo/keto reductase [Mahella australiensis 50-1 BON] Length = 378 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 7/155 (4%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A K V+ P +S++ + +M S + ++L Sbjct: 228 APTKRSLADWALQWVWNQPEVSIVLSGMSNMEQVKQNIESANRSGVNTLTQEELDILTKA 287 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ + C C C CPS + + A+ + R + ++ Sbjct: 288 KETYRKLSPIPCTGCYYCMP-CPSGVNIPGNF---ELYNNAHIYNDFER---FQKAYMHM 340 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R C C CP+G+ +A++K Sbjct: 341 NEADRASACEACGTCEGVCPQGIEITDRMAEVKEY 375 >gi|322437052|ref|YP_004219264.1| formate dehydrogenase, alpha subunit [Acidobacterium sp. MP5ACTX9] gi|321164779|gb|ADW70484.1| formate dehydrogenase, alpha subunit [Acidobacterium sp. MP5ACTX9] Length = 1008 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-------------KGAIAVYPLPHMSVIKDLVVDM 129 C +C + +DG AC + + L + + + + Sbjct: 64 QSCDTCMVKVDGKLVRACGTPVTSQMKVETEGYEVDVAQREAFDRILQNHMLYCTVCDNN 123 Query: 130 SHFYSQHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + + H + P K + + +C++C C +C S N Sbjct: 124 NQNCTVHNATADLDVKHQARPYMEKPYEKDMSNPFYRYDPNQCILCGRCVEACQSVQVNE 183 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D ++ +G C + +C CP Sbjct: 184 TLTINWESEHP--RVLWDGGEKIEGS------------SCVSCGHCVTVCP 220 >gi|242278078|ref|YP_002990207.1| heterodisulfide reductase, C subunit [Desulfovibrio salexigens DSM 2638] gi|242120972|gb|ACS78668.1| heterodisulfide reductase, C subunit [Desulfovibrio salexigens DSM 2638] Length = 186 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +++ + C C C+ CP + Y P + R + + + + Sbjct: 19 EKESGQNVSLCYQCGNCTAGCP----YTFAYDIPVS--RIMRMVQAGQ-------KETVL 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L+ C T +CT CP ++ A + ++ M Sbjct: 66 KCKSLWLCATCESCTTRCPNNIDVAHIMDVLRHMARREG 104 >gi|167463835|ref|ZP_02328924.1| formate dehydrogenase chain A [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384672|ref|ZP_08058350.1| oxidoreductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150557|gb|EFX44038.1| oxidoreductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 982 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 44/171 (25%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDI-------------KGAIAVYPLPHMSVIKDLVVDM 129 C +C DG AC +K + L + + + + Sbjct: 45 QSCDTCMCEADGKLVRACSTTLKPGMRIRTSSEKAQIAQKEAMDRILENHMLYCTVCDNN 104 Query: 130 SHFYSQHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E P K + + +C++C C +C N Sbjct: 105 NGNCKVHNTTEMLGIEHQSRPFRPKGYKKDMSNPFYRYDPDQCILCGRCVEACQDLQVNE 164 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + W D + + C + +C CP Sbjct: 165 TLSIDWEREIPRVIWDDD----------KAINES----SCVSCGHCVTVCP 201 >gi|150021446|ref|YP_001306800.1| electron transport complex, RnfABCDGE type, C subunit [Thermosipho melanesiensis BI429] gi|149793967|gb|ABR31415.1| electron transport complex, RnfABCDGE type, C subunit [Thermosipho melanesiensis BI429] Length = 438 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 18/83 (21%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C CP L P +L+D + +R D L C Sbjct: 364 CIRCSYCVNVCPM-------GLQP--------YLLDLL--GKKKRYDEAA-KIGLLDCIE 405 Query: 230 IMNCTQSCPKGLNPAKAIAKIKM 252 +CT CP + K I K Sbjct: 406 CGSCTYICPAKIEHVKTIKLTKK 428 >gi|15888854|ref|NP_354535.1| nitrogen fixation protein FixG [Agrobacterium tumefaciens str. C58] gi|15156618|gb|AAK87320.1| nitrogen fixation protein FixG [Agrobacterium tumefaciens str. C58] Length = 527 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 23/126 (18%), Gaps = 5/126 (3%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 VI L FY P + C+ C Sbjct: 181 VIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC 240 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPK 239 P D R E + + C C CP Sbjct: 241 P----WPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPM 296 Query: 240 GLNPAK 245 G++ Sbjct: 297 GIDIRD 302 >gi|296131592|ref|YP_003638839.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermincola sp. JR] gi|296030170|gb|ADG80938.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermincola potens JR] Length = 445 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 15/93 (16%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C+ C+ CP + L P +++ W+ + D C Sbjct: 250 SVCIQCSMCTEVCPRHLLGHR--LSPHKIMRGLAWMRPNEDTKTALL------------C 295 Query: 228 HTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 C CP L+P + A IK L + I Sbjct: 296 CECGACELYGCPMQLSPRQVNAAIKRELGKQGI 328 >gi|291539480|emb|CBL12591.1| Predicted oxidoreductases of the aldo/keto reductase family [Roseburia intestinalis XB6B4] Length = 380 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 62/211 (29%), Gaps = 11/211 (5%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT---LA 99 P M+ + ++ + ++ + E + G N+ G A Sbjct: 166 PEMEFVQLQINYYDWESENVQSRKCYEVAEKHGVPVIVMEPVKGGTLANMVGEPARILSA 225 Query: 100 CVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 ++ A+ LP++ ++ + D+ ++ + + Sbjct: 226 LDENASYASYAVRYAASLPNVILVLSGMSDLKQLQDNTAYMKDFQPLTDKEQQAIGKVVE 285 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + C C C CP D + + ++ + D +G + Sbjct: 286 E--LEKLPTIPCTNCRYCVEGCPKKIRIPDIF---GVYNMGVQFGL--TDVTRGSYRCQI 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + C C CP+ L K + + Sbjct: 339 DGSGKAGDCIKCGKCEAQCPQHLEIRKLLEE 369 >gi|224369305|ref|YP_002603469.1| DsrA1 [Desulfobacterium autotrophicum HRM2] gi|223692022|gb|ACN15305.1| DsrA1 [Desulfobacterium autotrophicum HRM2] Length = 351 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 35/128 (27%), Gaps = 22/128 (17%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRW 202 K +L H D + C+ C C+ CP+ W + A + + Sbjct: 218 TDKLAQKSILDLHGAPFWEDLAFTCINCGTCTFVCPTCWCFDIQDETKGNSAARFRNWDT 277 Query: 203 LI-----------DSRDEFQGERLDNLEDPFRLY--------RCHTIMNCTQSCPKGLNP 243 + + R E + + C C + CP ++ Sbjct: 278 CMSPLFTKHGSGHNPRGEKTQRVRQRFMHKLKYFLDKYDSGTMCVGCGRCVEKCPVNIDI 337 Query: 244 AKAIAKIK 251 + K+ Sbjct: 338 RQVCNKMN 345 >gi|254381625|ref|ZP_04996989.1| 4Fe-4S ferredoxin [Streptomyces sp. Mg1] gi|194340534|gb|EDX21500.1| 4Fe-4S ferredoxin [Streptomyces sp. Mg1] Length = 389 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 22/126 (17%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDS------ 206 + + E + D C+ C C+ CP+ + + + A RW L DS Sbjct: 260 MRDNLEAERWDDVTARCLSCGNCTMVCPTCFCTTTEDVTDLTGDHAERWRLWDSCYDLDF 319 Query: 207 --------RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L + C C CP G++ + + Sbjct: 320 SLLHGGPVRSTPRSRYRQWLTHKLGTWHDQFDSSGCVGCGRCIVWCPTGIDLTEEAHALH 379 Query: 252 MMLLDR 257 R Sbjct: 380 QEATQR 385 Score = 39.0 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +G ++ R L+ RD + ER D++ RC + NCT CP Sbjct: 247 MGRSMPPVDLRTLM--RDNLEAERWDDVTA-----RCLSCGNCTMVCP 287 >gi|209547065|ref|YP_002278983.1| cytochrome c oxidase accessory protein CcoG [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538309|gb|ACI58243.1| cytochrome c oxidase accessory protein CcoG [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 523 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCT 234 C+ CP L L+ Y D R E + L + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEARSRHAKKILAAGQSVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|163802832|ref|ZP_02196721.1| electron transport complex protein RnfC [Vibrio sp. AND4] gi|159173372|gb|EDP58195.1| electron transport complex protein RnfC [Vibrio sp. AND4] Length = 911 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 32/115 (27%), Gaps = 19/115 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + E + C+ C+ C+ +CP+ L Q Y Sbjct: 353 PITKTANCILAPKRREIASDQYEME-CIRCSQCAEACPASLLPQQ--LQWYSKSQEY--- 406 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E+L+ L L C C CP + + + K + R Sbjct: 407 ---------EKLEELN----LKDCIECGACAFVCPSEIPLVQYYRQAKAEIRTRA 448 >gi|303256299|ref|ZP_07342315.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Burkholderiales bacterium 1_1_47] gi|330998996|ref|ZP_08322721.1| FAD binding domain protein [Parasutterella excrementihominis YIT 11859] gi|302861028|gb|EFL84103.1| FAD binding/4Fe-4S binding/cysteine-rich domain protein [Burkholderiales bacterium 1_1_47] gi|329575738|gb|EGG57264.1| FAD binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 1302 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 9/107 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-------DSR 207 +Q E +Q D + C+ C C C ++ N++ P + A L+ +R Sbjct: 816 MQKSEAKQIADEIKTCLRCGKCKPVCTTHVPNANLLYSPRNKVIATSLLLEAFLYEEQTR 875 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D C C + CP ++ ++ ML Sbjct: 876 RGVSLKHFTEFGDVS--DHCTICQKCQKPCPVKIDFGHVTMLMRDML 920 >gi|257065960|ref|YP_003152216.1| aldo/keto reductase [Anaerococcus prevotii DSM 20548] gi|256797840|gb|ACV28495.1| aldo/keto reductase [Anaerococcus prevotii DSM 20548] Length = 374 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 54/159 (33%), Gaps = 8/159 (5%) Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 N L D+ + A+ PL +V+ L M+ ++E T AKE Sbjct: 219 RNMLKDFTDLSPAQEALKF-PLSLDNVMTVLS-GMNDIDQVRENLEMASTTDYNSLAKED 276 Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +E + I E + C C P D + L +L D D+ + E Sbjct: 277 EDFYEKARAIYKSRERIGCTACEYCLP---CTVDINIPKVFGLWNKAYLYDEADKSRKEY 333 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D LE+ C C CP+ L I +K Sbjct: 334 KDYLEEGVSPTECIECGKCEGICPQNLEI---IKGLKEA 369 >gi|116254650|ref|YP_770486.1| transmembrane nitrogen fixation cation transport protein FixG [Rhizobium leguminosarum bv. viciae 3841] gi|115259298|emb|CAK10433.1| transmembrane nitrogen fixation cation transport protein FixG [Rhizobium leguminosarum bv. viciae 3841] Length = 522 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCT 234 C+ CP L L+ Y D R E + L + + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHAKKALVNGLSVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|2398782|emb|CAA04805.1| FixG protein [Rhizobium leguminosarum] Length = 522 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCT 234 C+ CP L L+ Y D R E + L + + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHAKKALVNGLSVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|73668311|ref|YP_304326.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro] gi|72395473|gb|AAZ69746.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro] Length = 379 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 5/120 (4%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M + + + ++ D D C C C CP Sbjct: 247 MNTMEQVLDNTSYMTDFKPLNEEE--YRIISQVIDIINEDTAIPCTTCRYCVEGCPENIA 304 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D + A+ A R + DS L+ + C C ++CP+ L + Sbjct: 305 IPDYF---ALYNSAKRAVTDSISSQFVYYLNLTSTHGKASDCIDCKQCEKACPQHLKITE 361 >gi|325290014|ref|YP_004266195.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophobotulus glycolicus DSM 8271] gi|324965415|gb|ADY56194.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Syntrophobotulus glycolicus DSM 8271] Length = 295 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 5/111 (4%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q++ + + + L + ++ +CV C C CP+ + Sbjct: 149 KQNKKLPEGKDYSDVQAVEGLTADEKYQKFTANYAKCVRCYACRNVCPACNCRDCIFDHS 208 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 WL + + RC C + CP + Sbjct: 209 EKG-----WLGKTNSVSENLFFALTRAMHVAGRCIDCGECERVCPSNVPIM 254 >gi|296134509|ref|YP_003641751.1| formate dehydrogenase, alpha subunit [Thiomonas intermedia K12] gi|295794631|gb|ADG29421.1| formate dehydrogenase, alpha subunit [Thiomonas intermedia K12] Length = 977 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 31/98 (31%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N +G A + D L DP Sbjct: 177 MAVNLDACIQCNRCVRACREEQVND--VIGYAFRGHHSEIVFD------------LHDPM 222 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L P I +DR++ Sbjct: 223 GDSTCVACGECVQACPTGALMPKTHIGA---QTVDRRV 257 >gi|326318360|ref|YP_004236032.1| hypothetical protein Acav_3566 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375196|gb|ADX47465.1| Protein of unknown function DUF3683 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1303 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 833 DCLRCGKCKPVCATHVPRASLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 892 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 893 --ADHCTVCHKCYTPCPVKIDFGDVTMNMRNLL 923 >gi|125974915|ref|YP_001038825.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum ATCC 27405] gi|125715140|gb|ABN53632.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum ATCC 27405] gi|316939126|gb|ADU73160.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum DSM 1313] Length = 439 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 22/126 (17%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + L T K LL E + C+ C C +CP Sbjct: 329 MMGIAQYTLDTPVLKHTNALLAFDETTAVLPKEQACIRCGRCVRACPMNLLPL------Y 382 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI----AKI 250 + + R I+ + + + C +C CP +N ++I A++ Sbjct: 383 LNNNSIRGNIEEL------------NRYHVMDCIECGSCAYVCPAKINLVQSIRLGKAQV 430 Query: 251 KMMLLD 256 + Sbjct: 431 RQAAAK 436 >gi|256368816|ref|YP_003106322.1| cytochrome c oxidase accessory protein CcoG [Brucella microti CCM 4915] gi|255998974|gb|ACU47373.1| cytochrome c oxidase accessory protein CcoG [Brucella microti CCM 4915] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|224368797|ref|YP_002602958.1| FdhA6 [Desulfobacterium autotrophicum HRM2] gi|223691513|gb|ACN14796.1| FdhA6 [Desulfobacterium autotrophicum HRM2] Length = 921 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 31/120 (25%), Gaps = 15/120 (12%) Query: 122 IKDLVVDMSH-FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 +DL P+ + + I C++C C +C Sbjct: 124 EQDLCPVWGECKLQDLAYRYQVKARGLPQSKSKYPMERVNPFIIRDFSRCILCGRCVQAC 183 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ G D++ + L+D C C +CP G Sbjct: 184 REIQVNNAIDFGYRG--------ADTKIIAGADV--ALKDSD----CVFCGECVDACPVG 229 >gi|218887441|ref|YP_002436762.1| FAD linked oxidase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758395|gb|ACL09294.1| FAD linked oxidase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1204 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 23/80 (28%), Gaps = 9/80 (11%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPF 222 C C C CP ++ P A L++ ++ L L Sbjct: 728 CTRCGKCKQVCPMFYPEQSLQYHPRNKNIALGALVEAVYYSQVNKGRPDPFLLGELRTMM 787 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 C CT CP ++ Sbjct: 788 E--HCTGCGRCTSVCPVKID 805 >gi|254168232|ref|ZP_04875078.1| hypothetical protein ABOONEI_2758 [Aciduliprofundum boonei T469] gi|197622741|gb|EDY35310.1| hypothetical protein ABOONEI_2758 [Aciduliprofundum boonei T469] Length = 339 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 22/125 (17%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDS 206 + ++E+ ++ + CV C C+ CP+ + + R + DS Sbjct: 213 KRCSQEIKNKADNNIWKELGDICVSCGRCNFICPTCHCFDVKDISDFDGNNGERIRVWDS 272 Query: 207 --------------RDEFQGERLDNLEDPF-------RLYRCHTIMNCTQSCPKGLNPAK 245 R E + D F +Y C CT +C G+N + Sbjct: 273 CHLYEYALTSAENFRKERHARVRYRVYDKFVFPVMRYGVYACTGCGRCTDACHAGINIRE 332 Query: 246 AIAKI 250 + ++ Sbjct: 333 VLRRL 337 >gi|88811672|ref|ZP_01126926.1| cytochrome c3 hydrogenase alpha (or beta) chain [Nitrococcus mobilis Nb-231] gi|88791063|gb|EAR22176.1| cytochrome c3 hydrogenase alpha (or beta) chain [Nitrococcus mobilis Nb-231] Length = 378 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 22/120 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRW--------- 202 ++ E + + C+ C C+ CP+ + L A + RW Sbjct: 251 RRNLEHSRWDNVAERCLTCGNCTMVCPTCFCTSVEDETDLSGATAARTRRWDSCFTMDFS 310 Query: 203 LIDSRDEFQGER----------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 I R L D F C C CP G++ + + I Sbjct: 311 YIHGGSVRSSTRARYRQWMTHKLSTWVDQFGTSGCVGCGRCISWCPVGIDITEEVRAIHE 370 >gi|114565956|ref|YP_753110.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336891|gb|ABI67739.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 339 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 21/112 (18%) Query: 163 KIDGLYECVMCACCSTSCPSY----------WWNSDRYLGPAILLQAYRWLI----DSRD 208 + C C C+ CPS R+ + ++ + R Sbjct: 224 WEELSDACQTCGICTYLCPSCYCFDIQVKNQGEAGYRFRCWDSCMYGEYTMMAGGHNPRA 283 Query: 209 EFQGE-------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +L+ + + + C C +CP G++ +K I K Sbjct: 284 SATERFRNRFLHKLEFFNERYGMPLCTGCGRCIIACPAGIDISKIITAAKEA 335 >gi|222823439|ref|YP_002575013.1| hypothetical protein Cla_0404 [Campylobacter lari RM2100] gi|222538661|gb|ACM63762.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 212 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 71/241 (29%), Gaps = 45/241 (18%) Query: 28 KEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGS 87 RI+R++ D+ Y V V D L IK + C Sbjct: 3 ITLRIFRFDKDSDYLAYYKPY-VYDSKNFKSVYDVLSQIKK---DDIYFDFEENPESCIK 58 Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 ++ + + PL KDL++D S F + + Sbjct: 59 VNQVTIRQRR-DLNNIIERFGKELIIEPLDTKRATKDLIMDKSDFLEKLELFKG------ 111 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + E ++ D LY YLG + + AY+ L+ Sbjct: 112 ----LIDIHDIELYKQYDFLYYTSEV----------REFLPEYLGDSFFVFAYKMLL-KY 156 Query: 208 DEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPK--------GLNPAKAIAKIKMMLLDRK 258 E + L + D +Y HT K L+ I ++K+ML+ Sbjct: 157 PEKAPQFLKLVADEEKGIYY-HT---------KFKNFISSNELDYESYIKELKVMLVKSG 206 Query: 259 I 259 + Sbjct: 207 L 207 >gi|300709836|ref|YP_003735650.1| 4Fe-S protein [Halalkalicoccus jeotgali B3] gi|299123519|gb|ADJ13858.1| 4Fe-S protein [Halalkalicoccus jeotgali B3] Length = 737 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C+ SC ++ G A + Y I + E E LD E+ L C Sbjct: 324 YCIRCGACANSCANFQSVG----GHAFGGETYTGGIATGWEAGIEGLDVAEEFNDL--CT 377 Query: 229 TIMNCTQSCPKGLNP 243 C +CP ++ Sbjct: 378 GCSRCVNACPVKIDI 392 >gi|298675732|ref|YP_003727482.1| FAD linked oxidase domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288720|gb|ADI74686.1| FAD linked oxidase domain protein [Methanohalobium evestigatum Z-7303] Length = 1017 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 6/92 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 Y C C C + C Y+ P + + RDE Sbjct: 506 AYSCSQCGYCVSECDQYYGRGWESQSPRGKWFFIKEYLAGRDELDQ------GQTNTFLS 559 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C T C C + ++ K++ L+ K Sbjct: 560 CTTCEMCDTRCELNMPIEQSWRKLRPKLVQEK 591 >gi|237796195|ref|YP_002863747.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Ba4 str. 657] gi|229260863|gb|ACQ51896.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Ba4 str. 657] Length = 1192 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L +C+ C CS CP L ++ +S+ + L+ Sbjct: 682 PEWQLDKCIQCNQCSYVCP--HAVIRPVLLSDEEVKNAPEGFESKPAAGAKGLNFTM-AI 738 Query: 223 RLYRCHTIMNCTQSCPKG 240 Y C NC CP Sbjct: 739 SPYDCTGCGNCADVCPAK 756 >gi|255532381|ref|YP_003092753.1| cytochrome c oxidase accessory protein CcoG [Pedobacter heparinus DSM 2366] gi|255345365|gb|ACU04691.1| cytochrome c oxidase accessory protein CcoG [Pedobacter heparinus DSM 2366] Length = 466 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ +CP Y L ++ AY D R E + +R+ E+ C C Sbjct: 219 CTVACP-YGRLQGVLLDNQSIIVAY---DDLRGEPRAKRVKEQENQNG--DCIDCKLCVD 272 Query: 236 SCPKGLNP 243 CP G++ Sbjct: 273 VCPTGIDI 280 >gi|168183176|ref|ZP_02617840.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Bf] gi|182673633|gb|EDT85594.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Bf] Length = 1192 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L +C+ C CS CP L ++ +S+ + L+ Sbjct: 682 PEWQLDKCIQCNQCSYVCP--HAVIRPVLLSDEEVKNAPEGFESKPAAGAKGLNFTM-AI 738 Query: 223 RLYRCHTIMNCTQSCPKG 240 Y C NC CP Sbjct: 739 SPYDCTGCGNCADVCPAK 756 >gi|152968073|ref|YP_001363857.1| FAD linked oxidase domain protein [Kineococcus radiotolerans SRS30216] gi|151362590|gb|ABS05593.1| FAD linked oxidase domain protein [Kineococcus radiotolerans SRS30216] Length = 975 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 24/193 (12%) Query: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP--- 115 L+ + + +L+ G + DG A + + + + P Sbjct: 476 FLEDAARLVARHGGSLSGEHGDGRARGGLLPLMYDGEAIAAFEEVKRAFDPSDLLNPGII 535 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL-YECVMCA 174 + V DL V P + DR + + CV Sbjct: 536 VRPADVAADLRV-------------PASRPAHALGMPTKFAYSADRGDLTRAVHRCVGVG 582 Query: 175 CCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C CPSY D + + +++ + + E L C + Sbjct: 583 KCRADSGGVMCPSYLATGDEKDSTRGRARLLQEMVNG--TLVTDGWKSQEVKDVLDLCLS 640 Query: 230 IMNCTQSCPKGLN 242 C+ CP G++ Sbjct: 641 CKGCSADCPTGVD 653 >gi|330684502|gb|EGG96218.1| molybdopterin oxidoreductase Fe4S4 domain protein [Staphylococcus epidermidis VCU121] Length = 578 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 53/203 (26%), Gaps = 29/203 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKG 109 D L + ++ P + S C +C + IDG AC + Sbjct: 13 DYLVEPGTNLLEFIRSRDTFVPAICYNESMGPIQTCDTCTVEIDGKIERACGTTIDRPMT 72 Query: 110 AIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELL 155 L + + + H +++ W + + + ++ Sbjct: 73 VNTTTDHVQASQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDEWGLQHQTYEYKEKPY 132 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + +C++C C +C N + D + Sbjct: 133 EKDYGPFYRYDPNQCILCGRCVEACQDIEVNETISIDW--------------DREHPRVI 178 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 + + P C + C CP Sbjct: 179 WDNDVPINESSCVSCGQCATVCP 201 >gi|145588644|ref|YP_001155241.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047050|gb|ABP33677.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 485 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 15/92 (16%) Query: 165 DGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 G + C CP S + D +L + R E +G R + + Sbjct: 210 WGNAGFMREQVCKYMCPYARFQSVMVDKDTFLVTYDKV---------RGEPRGSRSKSAD 260 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 261 QSSLGLGDCVDCSICVQVCPTGIDIRDGLQYM 292 >gi|110598345|ref|ZP_01386619.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] gi|110340043|gb|EAT58544.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] Length = 337 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 21/154 (13%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + DL+ + S + ++ + + ++ E R + C+ C C+ Sbjct: 179 AFKSVADLLQEGSDPAAATVTVPEKFNADACAEWLKNPENFESRFWKEISARCIGCGSCT 238 Query: 178 TSCPSYWWN-----SDRYLGPAILLQA----YRWLID-----SRDEFQGERLDNLEDPFR 223 CP+ + G + + R + F Sbjct: 239 YLCPTCHCFDIQDEGGSFEGIRRKNWDSCSFALFTMHTSGHNPRSTQSARWRQRIMHKFN 298 Query: 224 LY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 + C CT+ CP + + + +I Sbjct: 299 YFPGKFSANSCSGCGRCTRECPVDMGITETLQEI 332 >gi|83645087|ref|YP_433522.1| polyferredoxin [Hahella chejuensis KCTC 2396] gi|83633130|gb|ABC29097.1| Polyferredoxin [Hahella chejuensis KCTC 2396] Length = 477 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLY 225 + C CP Y L+ +Y D R E +G R + + L Sbjct: 217 AGWMREQVCLYMCP-YARFQSVMFDRDTLVVSY----DPNRGEPRGSRKRSADPKEIGLG 271 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 272 DCVDCGMCVQVCPTGIDIRDGLQY 295 >gi|300775181|ref|ZP_07085043.1| NADH-quinone oxidoreductase subunit I [Chryseobacterium gleum ATCC 35910] gi|300505921|gb|EFK37057.1| NADH-quinone oxidoreductase subunit I [Chryseobacterium gleum ATCC 35910] Length = 185 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 11/96 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 V H ++ +G C C C+ +CP+ YR Sbjct: 52 PEVQKPRTTIWRGQHVLKRDEEGRERCTACGLCAVACPAEAITMTAAERTKEEKHLYR-- 109 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 E+ ++ + L RC C ++CPK Sbjct: 110 --------EEKYASVYEINML-RCIFCGMCEEACPK 136 >gi|254361779|ref|ZP_04977914.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] gi|261494020|ref|ZP_05990523.1| electron transport complex protein RnfC [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496221|ref|ZP_05992627.1| electron transport complex protein RnfC [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093314|gb|EDN74310.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] gi|261308173|gb|EEY09470.1| electron transport complex protein RnfC [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310186|gb|EEY11386.1| electron transport complex protein RnfC [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 764 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 28/108 (25%), Gaps = 21/108 (19%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ + H + + C+ C+ CS +CP Y Sbjct: 360 PITKTANCLIAPDHFEYAPPEPERSCIRCSSCSDACPVGLLPQQLYWFARAED------- 412 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D+ + + L C C CP + I + Sbjct: 413 --HDKSK---------EYHLDACIECGVCAYVCPSYIPL---IQYFRQ 446 >gi|126726681|ref|ZP_01742521.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Rhodobacterales bacterium HTCC2150] gi|126704010|gb|EBA03103.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Rhodobacterales bacterium HTCC2150] Length = 471 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 19/77 (24%), Gaps = 9/77 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + C CP + + W + R + + Sbjct: 204 FGGFMREQVCIYMCPWPRIQGAMMDDDTLTVAYRDWRGEPRGKKRDATR---------GD 254 Query: 227 CHTIMNCTQSCPKGLNP 243 C M C CP G++ Sbjct: 255 CIDCMACVNVCPMGIDI 271 >gi|118470838|ref|YP_888220.1| [NiFe] hydrogenase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118172125|gb|ABK73021.1| [NiFe] hydrogenase, beta subunit, putative [Mycobacterium smegmatis str. MC2 155] Length = 361 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 22/118 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI---------- 204 ++S E + +C+ C C+ CP+ + S + A RW+ Sbjct: 235 IESRESPHWNEVASQCLTCGNCTMVCPTCFCTSVEDVTDLTGEHAERWMNWASCFEMDFT 294 Query: 205 --------DSRDEFQGE----RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 S +L D F C C CP G++ + +A + Sbjct: 295 FIHEGTVRQSAPSRYRHWITHKLGTWHDQFGTTGCVGCGRCIAWCPTGIDITEEMATL 352 >gi|78187097|ref|YP_375140.1| oxidoreductase, FAD-binding [Chlorobium luteolum DSM 273] gi|78166999|gb|ABB24097.1| oxidoreductase, FAD-binding protein [Chlorobium luteolum DSM 273] Length = 1217 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 5/84 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C T C Y+ + P A L D++ E + Sbjct: 776 DYCIRCGKCKTDCCVYYPARGMFYHPRNKNLAIGSLIEALLFDAQRERSTDFALLRWLEE 835 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ Sbjct: 836 VADHCTICHKCLKPCPVDIDTGDV 859 >gi|260425798|ref|ZP_05779778.1| cytochrome c oxidase accessory protein CcoG [Citreicella sp. SE45] gi|260423738|gb|EEX16988.1| cytochrome c oxidase accessory protein CcoG [Citreicella sp. SE45] Length = 477 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C +CP + + + W + R + + L Sbjct: 205 FAFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRDWRGEPRGKHRKG-----PGAEAL 259 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 260 GDCIDCHACVNVCPMGIDIRD 280 >gi|260171471|ref|ZP_05757883.1| putative hydrogenase 4Fe-4S binding subunit [Bacteroides sp. D2] Length = 266 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ + +C+ C C +CP + + + + +W+ Sbjct: 148 YWMEEMSKCIKCYACRAACPLCYCSRC-----IVEVNCPQWVQPWSAPLTNMEWQINRVM 202 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C Q+CP G+ I + + Sbjct: 203 HMAGRCIGCGACKQACPVGIPLHLMIQSMMEDI 235 >gi|302867812|ref|YP_003836449.1| D-lactate dehydrogenase (cytochrome) [Micromonospora aurantiaca ATCC 27029] gi|302570671|gb|ADL46873.1| D-lactate dehydrogenase (cytochrome) [Micromonospora aurantiaca ATCC 27029] Length = 931 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 7/108 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 S P + + + CV C C CPS D P + R + + Sbjct: 517 SDDPEIHMRHLKTVPAVEEEVDRCVECGYCEPVCPSR----DLTTTPRQRIVLRREIAAA 572 Query: 207 RDEFQGERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIK 251 + L D + T C +CP +N + +++ Sbjct: 573 QAAGDTALARELTDDYDYDAVQTCAVDGMCATACPVLINTGDLVKRLR 620 >gi|332525158|ref|ZP_08401335.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] gi|332108444|gb|EGJ09668.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] Length = 484 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 5/70 (7%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP Y + L+ AY R E +G R + L C C Sbjct: 224 MCKYICP-YARFQSAMIDRDSLVIAYDS---GRGEPRGARSKKADAGALGLGSCVDCTLC 279 Query: 234 TQSCPKGLNP 243 Q CP G++ Sbjct: 280 VQVCPTGIDI 289 >gi|295096019|emb|CBK85109.1| electron transport complex, RnfABCDGE type, C subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 673 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Q L Sbjct: 367 EMGETQEEKGCIRCSACADACPADLLPQQLYWYSKG---------QLHDKAQAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 415 ------DCIECGACAWVCPSNIPLVQ 434 >gi|281418619|ref|ZP_06249638.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum JW20] gi|281407703|gb|EFB37962.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium thermocellum JW20] Length = 439 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 22/126 (17%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + L T K LL E + C+ C C +CP Sbjct: 329 MMGIAQYTLDTPVLKHTNALLAFDETTAVLPKEQACIRCGRCVRACPMNLLPL------Y 382 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI----AKI 250 + + R I+ + + + C +C CP +N ++I A++ Sbjct: 383 LNNNSIRGNIEEL------------NRYHVMDCIECGSCAYVCPAKINLVQSIRLGKAQV 430 Query: 251 KMMLLD 256 + Sbjct: 431 RQAAAK 436 >gi|199598589|ref|ZP_03212005.1| Iron-binding oxidase subunit [Lactobacillus rhamnosus HN001] gi|199590512|gb|EDY98602.1| Iron-binding oxidase subunit [Lactobacillus rhamnosus HN001] Length = 494 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 15/93 (16%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL---- 224 +C+ C C CP Y G L L + Sbjct: 311 QCIRCGACLNVCPVYRHIGGHGYGSIYPGPIGAVLS-----------PVLNGYEKFGDLP 359 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + CT++CP + + K + +++D+ Sbjct: 360 FASSLCAACTETCPVRIPLHHLLIKHREVMMDQ 392 >gi|21674071|ref|NP_662136.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium tepidum TLS] gi|21647224|gb|AAM72478.1| hydrogenase, iron-sulfur binding protein, putative [Chlorobium tepidum TLS] Length = 276 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 12/128 (9%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-------QKIDGLYECVMCAC 175 KD+V S E P E + E + +C+ C Sbjct: 112 KDVVPLEGRNISDFNIGEKIRSHTPPPHVIEAAEKIEAMSAQERFEFWKEEFAKCIKCYA 171 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + + + +W+ S + + RC C + Sbjct: 172 CRQVCPMCYCRRC-----IVDVNQPQWISTSSHTLGNFEWNLVRAFHLAGRCAACGACDR 226 Query: 236 SCPKGLNP 243 +CP + Sbjct: 227 ACPVNIPL 234 >gi|312131306|ref|YP_003998646.1| d-lactate dehydrogenase (cytochrome) [Leadbetterella byssophila DSM 17132] gi|311907852|gb|ADQ18293.1| D-lactate dehydrogenase (cytochrome) [Leadbetterella byssophila DSM 17132] Length = 982 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 11/119 (9%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNS 187 + + ++P+ +D+ + +C C T CPSY Sbjct: 535 MDEFLRYYPGQITPEFKTAFR--FKDQDILQHAEQCNGSGDCRKSHLSGGTMCPSYMATK 592 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + R + + R D+ E L C C CP ++ AK Sbjct: 593 NEKDTTRARANILRETL--TRSNKPNRFDSDEIKEVLDLCLACKACKSECPSNVDMAKL 649 >gi|285808569|gb|ADC36090.1| NADH-quinone oxidoreductase subunit 9 [uncultured bacterium 164] Length = 173 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 10/73 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +CV C C+ +CPS + P A R RDE + RC Sbjct: 59 EKCVACYLCAAACPSDCIYIEAEDDPRPY--AERV---GRDERYARVYNI-----DYGRC 108 Query: 228 HTIMNCTQSCPKG 240 C ++CPK Sbjct: 109 IFCGFCVEACPKD 121 >gi|302535960|ref|ZP_07288302.1| oxidoreductase [Streptomyces sp. C] gi|302444855|gb|EFL16671.1| oxidoreductase [Streptomyces sp. C] Length = 831 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 10/84 (11%) Query: 169 ECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 CV A C ++ CPSY + + ++D G R + Sbjct: 415 RCVGVAKCRSAEPGGPEVMCPSYRVTGEERHSTRGRARLLHEMLDGEILTDGWRSTEV-- 472 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPA 244 L C C CP G++ A Sbjct: 473 AEALDLCLGCKGCRSDCPVGVDVA 496 >gi|241113300|ref|YP_002973135.1| cytochrome c oxidase accessory protein CcoG [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861508|gb|ACS59174.1| cytochrome c oxidase accessory protein CcoG [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 522 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFRLYRCHTIMNCT 234 C+ CP L L+ Y D R E + L + + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHAKKALVNGLSVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|56707219|ref|YP_169115.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis SCHU S4] gi|89257082|ref|YP_514444.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica LVS] gi|110669689|ref|YP_666246.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis FSC198] gi|115315439|ref|YP_764162.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica OSU18] gi|134301254|ref|YP_001121222.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis WY96-3418] gi|167009474|ref|ZP_02274405.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica FSC200] gi|187930996|ref|YP_001890980.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. mediasiatica FSC147] gi|224456280|ref|ZP_03664753.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis MA00-2987] gi|254368318|ref|ZP_04984336.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. holarctica 257] gi|254368973|ref|ZP_04984986.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica FSC022] gi|254371435|ref|ZP_04987436.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|254874057|ref|ZP_05246767.1| NADH-quinone oxidoreductase subunit I [Francisella tularensis subsp. tularensis MA00-2987] gi|81598102|sp|Q5NIM7|NUOI_FRATT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|115502530|sp|Q2A1F8|NUOI_FRATH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|122324576|sp|Q0BK59|NUOI_FRATO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123169702|sp|Q14K30|NUOI_FRAT1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633520|sp|A4IW00|NUOI_FRATW RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737393|sp|B2SEV7|NUOI_FRATM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|54114125|gb|AAV29696.1| NT02FT1744 [synthetic construct] gi|56603711|emb|CAG44672.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|89144913|emb|CAJ80261.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. holarctica LVS] gi|110320022|emb|CAL08055.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. tularensis FSC198] gi|115130338|gb|ABI83525.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp. holarctica OSU18] gi|134049031|gb|ABO46102.1| NADH dehydrogenase I subunit I [Francisella tularensis subsp. tularensis WY96-3418] gi|134254126|gb|EBA53220.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. holarctica 257] gi|151569674|gb|EDN35328.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|157121894|gb|EDO66064.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica FSC022] gi|187711905|gb|ACD30202.1| NADH dehydrogenase I, I subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|254840056|gb|EET18492.1| NADH-quinone oxidoreductase subunit I [Francisella tularensis subsp. tularensis MA00-2987] gi|282158327|gb|ADA77718.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis NE061598] Length = 162 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L V HF+++ +++ + H R+ +G C+ C C Sbjct: 15 ELLKGLKVTGKHFFTRKVTVQY--PDEKTPISNRFRGLHALRRYENGEERCIACKLCEVV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + +D L++C C +SCP Sbjct: 73 CPALAITINSTEREDGTRRTSSYEMD------------------LFKCIFCGYCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|119384581|ref|YP_915637.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Paracoccus denitrificans PD1222] gi|119374348|gb|ABL69941.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Paracoccus denitrificans PD1222] Length = 485 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 21/80 (26%), Gaps = 3/80 (3%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-Y 225 C +CP + + + W + R + + + Sbjct: 206 FGGFAREQICVYACPWPRIQAAMMDEDTLTVAYREWRGEPRGKLHKG--EPTKSDGGAKG 263 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 264 DCIDCMACVNVCPMGIDIRD 283 >gi|254718547|ref|ZP_05180358.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. 83/13] gi|265983520|ref|ZP_06096255.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella sp. 83/13] gi|306838456|ref|ZP_07471298.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. NF 2653] gi|264662112|gb|EEZ32373.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella sp. 83/13] gi|306406460|gb|EFM62697.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. NF 2653] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|253584347|ref|ZP_04861545.1| 4Fe-4S ferredoxin [Fusobacterium varium ATCC 27725] gi|251834919|gb|EES63482.1| 4Fe-4S ferredoxin [Fusobacterium varium ATCC 27725] Length = 137 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 41/99 (41%), Gaps = 13/99 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C CS CP+ D + P +++ + ++ ++ Sbjct: 19 EEISKEKTANCMQCGKCSAGCPAA---DDMDILPHQVIRHLQM----------GDVETIK 65 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C + C CP+ ++ K + +++ ++ +K Sbjct: 66 NSKTIWTCASCFTCASRCPRNVDLCKLMEAVRLTIVRKK 104 >gi|229523194|ref|ZP_04412601.1| electron transport complex protein RnfC [Vibrio cholerae TM 11079-80] gi|229339557|gb|EEO04572.1| electron transport complex protein RnfC [Vibrio cholerae TM 11079-80] Length = 880 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|306844995|ref|ZP_07477576.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. BO1] gi|306274627|gb|EFM56416.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. BO1] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTVTTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|289435849|ref|YP_003465721.1| formate dehydrogenase, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172093|emb|CBH28639.1| formate dehydrogenase, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 995 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 47/172 (27%), Gaps = 31/172 (18%) Query: 83 GICGSCGMNIDGTNTLACVKDM-------------KDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + K+ + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTKVTEGMEIKTNSDVAKEAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E + P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEQQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCP 238 + E R+ +D P L C + C CP Sbjct: 166 TLSIDW---------------ERSQPRVIWDDDKPANLSSCVSCGLCATVCP 202 >gi|256112877|ref|ZP_05453798.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis bv. 3 str. Ether] gi|265994324|ref|ZP_06106881.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella melitensis bv. 3 str. Ether] gi|262765437|gb|EEZ11226.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella melitensis bv. 3 str. Ether] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|289582545|ref|YP_003481011.1| D-lactate dehydrogenase (cytochrome) [Natrialba magadii ATCC 43099] gi|289532098|gb|ADD06449.1| D-lactate dehydrogenase (cytochrome) [Natrialba magadii ATCC 43099] Length = 1035 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 17/124 (13%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILL 197 + L+ D + C C C CP+Y + + Sbjct: 593 DFEADFEPTLEWQNDNGMQGMVELCHGCGGCRGEQETTGGVMCPTYRASQEEITATRGRA 652 Query: 198 QAYRWLI----DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A R + D+ + E ++ + D C C CP ++ AK A++ Sbjct: 653 NALRQAMSGGMDADEATSDEFVEEVMD-----LCIGCKGCAIDCPSEVDMAKLKAEVTHE 707 Query: 254 LLDR 257 R Sbjct: 708 YHQR 711 >gi|171058161|ref|YP_001790510.1| cytochrome c oxidase accessory protein CcoG [Leptothrix cholodnii SP-6] gi|170775606|gb|ACB33745.1| cytochrome c oxidase accessory protein CcoG [Leptothrix cholodnii SP-6] Length = 481 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYR 226 + C CP Y + ++ AY R E +G R + L Sbjct: 210 AGFMREQVCKYMCP-YARFQSALIDRDSMVIAYDS---GRGEPRGSRSKKADLATLGLGS 265 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 266 CVDCTMCVQVCPTGIDI 282 >gi|90420175|ref|ZP_01228083.1| FAD-containing oxidoreductase [Aurantimonas manganoxydans SI85-9A1] gi|90335509|gb|EAS49259.1| FAD-containing oxidoreductase [Aurantimonas manganoxydans SI85-9A1] Length = 1057 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 11/96 (11%) Query: 168 YECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C S CPSY + R I + D + + Sbjct: 587 EMCNNNGACRKSAGAVMCPSYRVTRNERDVTRGRANTLRLAISGQLGPDALASDEMAETL 646 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +L C + C + CP G++ +AK+K +L ++ Sbjct: 647 KL--CVSCKACRRECPTGVD----MAKMKAEVLYQR 676 >gi|17987850|ref|NP_540484.1| nitrogen fixation protein FIXG [Brucella melitensis bv. 1 str. 16M] gi|23501264|ref|NP_697391.1| iron-sulfur cluster-binding protein [Brucella suis 1330] gi|161618339|ref|YP_001592226.1| cytochrome c oxidase accessory protein CcoG [Brucella canis ATCC 23365] gi|163842646|ref|YP_001627050.1| cytochrome c oxidase accessory protein CcoG [Brucella suis ATCC 23445] gi|225626878|ref|ZP_03784917.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti str. Cudo] gi|225851903|ref|YP_002732136.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis ATCC 23457] gi|254701175|ref|ZP_05163003.1| cytochrome c oxidase accessory protein CcoG [Brucella suis bv. 5 str. 513] gi|254703721|ref|ZP_05165549.1| cytochrome c oxidase accessory protein CcoG [Brucella suis bv. 3 str. 686] gi|254709516|ref|ZP_05171327.1| cytochrome c oxidase accessory protein CcoG [Brucella pinnipedialis B2/94] gi|256031010|ref|ZP_05444624.1| cytochrome c oxidase accessory protein CcoG [Brucella pinnipedialis M292/94/1] gi|256044082|ref|ZP_05446993.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis bv. 1 str. Rev.1] gi|256060503|ref|ZP_05450672.1| cytochrome c oxidase accessory protein CcoG [Brucella neotomae 5K33] gi|256159064|ref|ZP_05456893.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti M490/95/1] gi|256254413|ref|ZP_05459949.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti B1/94] gi|256264586|ref|ZP_05467118.1| 4Fe-4S ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|260168142|ref|ZP_05754953.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. F5/99] gi|260563443|ref|ZP_05833929.1| 4Fe-4S ferredoxin [Brucella melitensis bv. 1 str. 16M] gi|260567027|ref|ZP_05837497.1| 4Fe-4S ferredoxin [Brucella suis bv. 4 str. 40] gi|261221579|ref|ZP_05935860.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti B1/94] gi|261317042|ref|ZP_05956239.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella pinnipedialis B2/94] gi|261324495|ref|ZP_05963692.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella neotomae 5K33] gi|261751712|ref|ZP_05995421.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella suis bv. 5 str. 513] gi|261754365|ref|ZP_05998074.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella suis bv. 3 str. 686] gi|261757600|ref|ZP_06001309.1| 4Fe-4S ferredoxin [Brucella sp. F5/99] gi|265988079|ref|ZP_06100636.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella pinnipedialis M292/94/1] gi|265990496|ref|ZP_06103053.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella melitensis bv. 1 str. Rev.1] gi|265997543|ref|ZP_06110100.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M490/95/1] gi|294851745|ref|ZP_06792418.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. NVSL 07-0026] gi|17983580|gb|AAL52748.1| nitrogen fixation protein fixg [Brucella melitensis bv. 1 str. 16M] gi|23347149|gb|AAN29306.1| iron-sulfur cluster-binding protein [Brucella suis 1330] gi|161335150|gb|ABX61455.1| cytochrome c oxidase accessory protein CcoG [Brucella canis ATCC 23365] gi|163673369|gb|ABY37480.1| cytochrome c oxidase accessory protein CcoG [Brucella suis ATCC 23445] gi|225618535|gb|EEH15578.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti str. Cudo] gi|225640268|gb|ACO00182.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis ATCC 23457] gi|260153459|gb|EEW88551.1| 4Fe-4S ferredoxin [Brucella melitensis bv. 1 str. 16M] gi|260156545|gb|EEW91625.1| 4Fe-4S ferredoxin [Brucella suis bv. 4 str. 40] gi|260920163|gb|EEX86816.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti B1/94] gi|261296265|gb|EEX99761.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella pinnipedialis B2/94] gi|261300475|gb|EEY03972.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella neotomae 5K33] gi|261737584|gb|EEY25580.1| 4Fe-4S ferredoxin [Brucella sp. F5/99] gi|261741465|gb|EEY29391.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella suis bv. 5 str. 513] gi|261744118|gb|EEY32044.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella suis bv. 3 str. 686] gi|262552011|gb|EEZ08001.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M490/95/1] gi|263001280|gb|EEZ13855.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella melitensis bv. 1 str. Rev.1] gi|263094950|gb|EEZ18658.1| 4Fe-4S ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|264660276|gb|EEZ30537.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella pinnipedialis M292/94/1] gi|294820334|gb|EFG37333.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. NVSL 07-0026] gi|326408401|gb|ADZ65466.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis M28] gi|326538115|gb|ADZ86330.1| cytochrome c oxidase accessory protein CcoG [Brucella melitensis M5-90] Length = 516 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|315919787|ref|ZP_07916027.1| 4Fe-4S ferredoxin [Bacteroides sp. D2] gi|313693662|gb|EFS30497.1| 4Fe-4S ferredoxin [Bacteroides sp. D2] Length = 294 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ + +C+ C C +CP + + + + +W+ Sbjct: 176 YWMEEMSKCIKCYACRAACPLCYCSRC-----IVEVNCPQWVQPWSAPLTNMEWQINRVM 230 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C Q+CP G+ I + + Sbjct: 231 HMAGRCIGCGACKQACPVGIPLHLMIQSMMEDI 263 >gi|255535803|ref|YP_003096174.1| NADH-ubiquinone oxidoreductase chain I [Flavobacteriaceae bacterium 3519-10] gi|255341999|gb|ACU08112.1| NADH-ubiquinone oxidoreductase chain I [Flavobacteriaceae bacterium 3519-10] Length = 182 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 11/120 (9%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + M H + V AK H ++ +G C C C+ Sbjct: 25 EILKGMAITMKHALQGSKGKVFSYPEVEKPRAKVWRGLHVLKRDEEGRERCTACGLCAVV 84 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ YR E+ ++ + L RC C ++CPK Sbjct: 85 CPAEAITMTSAERTREEKHLYR----------EEKYASVYEINML-RCIFCGLCEEACPK 133 >gi|258514565|ref|YP_003190787.1| hypothetical protein Dtox_1282 [Desulfotomaculum acetoxidans DSM 771] gi|257778270|gb|ACV62164.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 416 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 12/103 (11%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K + K C+ C C+ C Y ++L R Sbjct: 10 KFDPAFRAEVANLVKGFDFGNCLACGMCTAGC--------AYSDVHANNDPRKFL---RK 58 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 G R + + DP+ + C CT CP G+N A + I+ Sbjct: 59 LILGMREEAMNDPYY-WLCTMCERCTIECPMGINVAAIVRGIR 100 >gi|224541300|ref|ZP_03681839.1| hypothetical protein CATMIT_00460 [Catenibacterium mitsuokai DSM 15897] gi|224525737|gb|EEF94842.1| hypothetical protein CATMIT_00460 [Catenibacterium mitsuokai DSM 15897] Length = 402 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 20/106 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L D ++ C+ C C +CPS+ L P L QA D + Sbjct: 315 LAFTHDEVALNTPTACIRCGRCIDACPSH-------LIPQKLNQASLKN----DINTFIQ 363 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML--LDRK 258 L+ +E C C+ CP N +AI K K ++ L RK Sbjct: 364 LNGME-------CIECGCCSYVCPAKRNMTQAIRKCKSIVASLKRK 402 >gi|55376836|ref|YP_134687.1| putative oxidoreductase [Haloarcula marismortui ATCC 43049] gi|55229561|gb|AAV44981.1| putative oxidoreductase [Haloarcula marismortui ATCC 43049] Length = 1014 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 44/157 (28%), Gaps = 33/157 (21%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE------------ 169 +DL + + + + D L Sbjct: 548 FRDLKSAFDPDWR-LNPGNICGEHDPAENLRYDPDYEFDAGFDPALDWDNENGFQGMVEL 606 Query: 170 CVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNL 218 C CA C+ CP+Y + R +D D F+ E + + Sbjct: 607 CHGCAGCTGHQETTGGVMCPTYRAAEEEITSTRGRANMLRSAMDGDLPDDPFEEEFVTEV 666 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D C C + CP G++ +AK+K ++ Sbjct: 667 LD-----LCIGCKGCKKDCPSGVD----MAKLKAEVV 694 >gi|297626008|ref|YP_003687771.1| oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921773|emb|CBL56331.1| oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 942 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 10/91 (10%) Query: 160 DRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 D +++C C CPSY + + +I+ R Sbjct: 528 DPLFTRHVHQCTGVGKCLANSTKAGGVMCPSYQATGNERDSTRGRSHVLQEMINGRLITG 587 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + L C C + CP G++ Sbjct: 588 GWRAPEV--AEALDFCLACKGCRRECPTGID 616 >gi|258544176|ref|ZP_05704410.1| cytochrome c oxidase accessory protein FixG [Cardiobacterium hominis ATCC 15826] gi|258520552|gb|EEV89411.1| cytochrome c oxidase accessory protein FixG [Cardiobacterium hominis ATCC 15826] Length = 461 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 9/119 (7%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + +F + I + + + + + V C CP + Sbjct: 166 VGYFVPIRQLIPEFFTLHADVETYFWVAFYGSFCYLQ--AGIVREQFCKYVCPYARFQGA 223 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L+ AY D + RL + +P L C C Q CP G++ Sbjct: 224 MFDQ-DTLIIAY----DPQRGEPRRRLKKQDRENPDALGFCVDCTMCVQVCPTGIDIRD 277 >gi|258404551|ref|YP_003197293.1| response regulator receiver protein [Desulfohalobium retbaense DSM 5692] gi|257796778|gb|ACV67715.1| response regulator receiver protein [Desulfohalobium retbaense DSM 5692] Length = 1142 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 10/126 (7%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 PL + F+ + T + + + + ++C+ C Sbjct: 63 PLTERDDSSQFCLRKGLFHRNLDILLSSRLTSLEGEPGKFQAVVKQQSSLVDAHKCISCG 122 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CST CP D + + +A +L + +D C C Sbjct: 123 QCSTVCPVR--IPDTF-NAGLGERAAIYLPVPHNIPNQYVVDLAH-------CTRCWKCA 172 Query: 235 QSCPKG 240 ++CP G Sbjct: 173 EACPTG 178 >gi|226939927|ref|YP_002795000.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Laribacter hongkongensis HLHK9] gi|226714853|gb|ACO73991.1| Probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Laribacter hongkongensis HLHK9] Length = 474 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 11/95 (11%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLD 216 + +Y+ P Q+ + D+ R E +G R Sbjct: 197 QAFWIFFYAGFTYLLAAVMREQVCKYMCPYARFQSVMFDADTLIISYDVERGEPRGARKK 256 Query: 217 NLEDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAK 249 + DP + C C Q CP G++ + Sbjct: 257 GV-DPKTVNKGDCVNCGICVQVCPTGIDIRDGLQY 290 >gi|313631834|gb|EFR99003.1| putative formate dehydrogenase [Listeria seeligeri FSL N1-067] Length = 995 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 47/172 (27%), Gaps = 31/172 (18%) Query: 83 GICGSCGMNIDGTNTLACVKDM-------------KDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C +DG AC + K+ + L + + + + Sbjct: 46 QSCDTCMCEVDGELMRACSTKVTEGMEIKTNSDVAKEAQLEAMDRILENHLLYCTVCDNN 105 Query: 130 SHFYSQHRSIE--PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + E + P K L +C++C C +C N Sbjct: 106 NGNCKVHNTTELLGVEQQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNE 165 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCP 238 + E R+ +D P L C + C CP Sbjct: 166 TLSIDW---------------ERSQPRVIWDDDKPANLSSCVSCGLCATVCP 202 >gi|258516623|ref|YP_003192845.1| formate dehydrogenase, alpha subunit [Desulfotomaculum acetoxidans DSM 771] gi|257780328|gb|ACV64222.1| formate dehydrogenase, alpha subunit [Desulfotomaculum acetoxidans DSM 771] Length = 900 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 49/203 (24%), Gaps = 30/203 (14%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDG-TNTLACVKDMKDIKGAIA 112 G VL I I + R G C C + + G N A + Sbjct: 16 PKGTSVLYAARKIGIDIPTFCHDQELARFGACRICVVEVPGMRNLPASCVTEATDGMVVY 75 Query: 113 VYPLPHMSVIKD-------------LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + K L + + ++ E Sbjct: 76 TESETVVEARKTILELMLANHPADCLTCSKNGDCRLQDYAYRYNIRGDVFFGEKHNYPIE 135 Query: 160 DRQKI--DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 D + +C++C C +C G ++ AYR L Sbjct: 136 DSNPFIIRDMNKCILCGKCVRACAEVQ-------GRGVIDFAYRGFNAK--VATAMDLPL 186 Query: 218 LEDPFRLYRCHTIMNCTQSCPKG 240 +E C +C CP G Sbjct: 187 IESE-----CVFCGSCVAVCPVG 204 >gi|238756600|ref|ZP_04617897.1| hypothetical protein yruck0001_34480 [Yersinia ruckeri ATCC 29473] gi|238705180|gb|EEP97600.1| hypothetical protein yruck0001_34480 [Yersinia ruckeri ATCC 29473] Length = 376 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 14/44 (31%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D + L C C +CP + I + K Sbjct: 17 DGERLRLKDPMLYDEALKYCTNCKRCEVACPSDVKIGDIIQRAK 60 >gi|148559439|ref|YP_001258393.1| cytochrome c oxidase accessory protein CcoG [Brucella ovis ATCC 25840] gi|148370696|gb|ABQ60675.1| cytochrome c oxidase accessory protein CcoG [Brucella ovis ATCC 25840] Length = 515 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 141 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 193 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 194 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 251 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 252 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 291 >gi|2338743|gb|AAC46112.1| ferrodoxin like protein [Rhodobacter capsulatus] Length = 486 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 4/74 (5%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C +CP + + + AYR R + ++ + L C Sbjct: 211 FAREQMCIYACP-WPRIQAAMMDEDTITIAYR-EWRGRTRGKLQKNEKL--AEGQGDCID 266 Query: 230 IMNCTQSCPKGLNP 243 M C CP G++ Sbjct: 267 CMACVNVCPMGIDI 280 >gi|76666799|emb|CAJ31177.1| Quinone-interacting membrane-bound oxidoreductase complex subunit C [uncultured sulfate-reducing bacterium] Length = 392 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L +C CA CST+C + D P + W + ++DP ++ Sbjct: 27 LKKCYQCATCSTTC---NLSPDGKPFPRKEMLLASWGQTG---------ELMKDPD-VWL 73 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C+ +C+ CP+G P +A ++ + Sbjct: 74 CYQCNDCSIHCPRGARPGDVLAAVRSFAYKQ 104 >gi|114321028|ref|YP_742711.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227422|gb|ABI57221.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 460 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 5/83 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYR 226 + C CP Y P L+ +Y + R E +G R ++ L Sbjct: 202 AGYMREQVCKYMCP-YARFQGAMFDPDTLIISY---DEERGEPRGPRKRGIDHRAKGLGD 257 Query: 227 CHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 258 CIDCKLCVQVCPTGIDIRDGLQY 280 >gi|331699335|ref|YP_004335574.1| D-lactate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326954024|gb|AEA27721.1| D-lactate dehydrogenase (cytochrome) [Pseudonocardia dioxanivorans CB1190] Length = 982 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 12/132 (9%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE-CVMCAC 175 P + +V + R L +DR C+ Sbjct: 511 PDDRMNPGCLVRPAKLDDDLRVFVGMPSIADTPQ----LAFADDRGSFTRATRRCLGVGR 566 Query: 176 CST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 C T CPSY + + + + + G D+ + L C + Sbjct: 567 CVTGSGGVMCPSYRATGEEMHSTRGRARLLFEMANGQVVGGG--WDSPDVAEALDLCLSC 624 Query: 231 MNCTQSCPKGLN 242 C + CP G++ Sbjct: 625 KGCKRDCPVGVD 636 >gi|308183376|ref|YP_003927503.1| NADH dehydrogenase subunit G [Helicobacter pylori PeCan4] gi|308065561|gb|ADO07453.1| NADH dehydrogenase subunit G [Helicobacter pylori PeCan4] Length = 844 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 63/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C + L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGEDN--------LKATKANLHAPDKFKDR---MSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|296269834|ref|YP_003652466.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Thermobispora bispora DSM 43833] gi|296092621|gb|ADG88573.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Thermobispora bispora DSM 43833] Length = 356 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 22/134 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + + + +H+ + D C+ CA C+ CP+ + ++ Sbjct: 223 ARMGRRVDTDGMKERVASAHDSPRWQDVGARCLTCANCTMVCPTCFCSTVEDATVPGTGT 282 Query: 199 AYRW-LIDS--------------RDEFQGERLDNL-------EDPFRLYRCHTIMNCTQS 236 A R + DS R L D F +Y C C Sbjct: 283 AERTEVWDSCFTLGFTELGGTPVRRSSAARYRQWLTHKFSTWYDQFGVYGCVGCGRCITW 342 Query: 237 CPKGLNPAKAIAKI 250 CP G++ + +A + Sbjct: 343 CPVGIDVTEELANL 356 >gi|296102198|ref|YP_003612344.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056657|gb|ADF61395.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 1174 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSAIRAKVVSPDAMESAPSSLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + K+ Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPDIKAINMMSRLEHVEEEKV 782 >gi|254284317|ref|ZP_04959285.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [gamma proteobacterium NOR51-B] gi|219680520|gb|EED36869.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [gamma proteobacterium NOR51-B] Length = 335 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 38/118 (32%), Gaps = 22/118 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-------WLID-SR 207 + + Q D C+ C C+ +CP+ + +S + A R + +D S Sbjct: 212 DNPDHAQWDDVAARCLSCGNCTFACPTCFCHSTEDVTTIDGEVAERQQRWDSCFSLDFSY 271 Query: 208 DEFQGER--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R L N D F C C CP G++ A I+ Sbjct: 272 IRGGAVRPGVASRYRQWMTHKLANWFDQFGESGCVGCGRCITWCPSGIDITAEAAAIR 329 >gi|258514563|ref|YP_003190785.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778268|gb|ACV62162.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 343 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 25/127 (19%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWN----------------SDRYLGPAILLQA 199 ED +C+ C C+ CP+ D + P L Sbjct: 217 NMFEDSIWSSIHEKCLGCGTCTYFCPTCHCFDLIDEAVDVNGCRVRNWDSCMFPLFTLHG 276 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R + + FR + C C ++CP L+ + I+ I+ Sbjct: 277 SGHN--PRTSGKERYRQRVMHKFRYFVENVNETACVGCGRCIKNCPVNLDIRQVISSIQA 334 Query: 253 MLLDRKI 259 ++ + Sbjct: 335 KNIEAGV 341 >gi|254485741|ref|ZP_05098946.1| cytochrome c oxidase accessory protein CcoG [Roseobacter sp. GAI101] gi|214042610|gb|EEB83248.1| cytochrome c oxidase accessory protein CcoG [Roseobacter sp. GAI101] Length = 412 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 11/82 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFR 223 + C+ CP + + P + AYR W + R + Sbjct: 144 FVFGGFLREQVCNYMCP-WPRIQAAMMDPDTITVAYREWRGEPRGKKH---------DGT 193 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 C M C CP G++ Sbjct: 194 TGDCIDCMACVNVCPAGIDIRD 215 >gi|254476182|ref|ZP_05089568.1| cytochrome c oxidase accessory protein CcoG [Ruegeria sp. R11] gi|214030425|gb|EEB71260.1| cytochrome c oxidase accessory protein CcoG [Ruegeria sp. R11] Length = 446 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 4/70 (5%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + + W + R + + D C M C Sbjct: 182 CIYACPWPRIQAAMMDEDTLTVGYREWRGEPRGKARKT--DEPGTQHG--DCIDCMACVN 237 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 238 VCPMGIDIRD 247 >gi|296102657|ref|YP_003612803.1| electron transport complex protein RnfC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057116|gb|ADF61854.1| electron transport complex protein RnfC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 607 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C+ +CP+ Y D+ Q L Sbjct: 367 EMGEEQEEKGCIRCSACADACPADLLPQQLYWYSKG---------QLHDKAQAHNLA--- 414 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP + + Sbjct: 415 ------DCIECGACAWVCPSNIPLVQ 434 >gi|220904638|ref|YP_002479950.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868937|gb|ACL49272.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 441 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 16/115 (13%) Query: 148 PKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 P + + D + L C C+ C+ CP LG + ++D Sbjct: 231 PPDHNVVNRKVMDPHVVKRLTNTVCCQCSQCTDLCP------RNLLGHKLHPHKLMRVLD 284 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 + + L C C + +CP GL+P + A +K L+ I Sbjct: 285 GQTISNPVAKEALL-------CSECGICEKFACPMGLSPREVNAMLKQELMKAGI 332 >gi|89098845|ref|ZP_01171726.1| YjgC [Bacillus sp. NRRL B-14911] gi|89086521|gb|EAR65641.1| YjgC [Bacillus sp. NRRL B-14911] Length = 989 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 52/206 (25%), Gaps = 30/206 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDI 107 V + + LL + P + S C +C ++++G +C + D Sbjct: 16 EVKVAAGDETTILQLLQNSSVEVPNVCYHPSLGPIETCDTCIVSVNGELVRSCSTKLNDG 75 Query: 108 KGAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAK 152 V L + + + + H +++ P K Sbjct: 76 DIIDTVSADVKEAQVIGMDRILTNHELYCTVCDYNNGGCEVHNTVKEMKINHQSVPFAQK 135 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + +C++C C +C + W D Sbjct: 136 PYPADNSHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWEREKPRVIWDNDVPINES- 194 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 195 -------------SCVSCGHCSTVCP 207 >gi|86147961|ref|ZP_01066265.1| electron transport complex protein RnfC [Vibrio sp. MED222] gi|85834286|gb|EAQ52440.1| electron transport complex protein RnfC [Vibrio sp. MED222] Length = 902 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + + EC+ C+ C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRREISPSTYEMECIRCSACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + E L+ + C C CP + + + K + RK Sbjct: 402 KANELDKCEELN-------IKDCIECGACAFVCPSEIPLVQYYRQAKAEIKTRK 448 >gi|84393396|ref|ZP_00992155.1| electron transport complex protein RnfC [Vibrio splendidus 12B01] gi|84376005|gb|EAP92894.1| electron transport complex protein RnfC [Vibrio splendidus 12B01] Length = 967 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + + EC+ C+ C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRREISPSTYEMECIRCSACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + E L+ + C C CP + + + K + RK Sbjct: 402 KANELDKCEELN-------IKDCIECGACAFVCPSEIPLVQYYRQAKAEIKTRK 448 >gi|331641950|ref|ZP_08343085.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H736] gi|331038748|gb|EGI10968.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli H736] Length = 1048 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 546 WEKRNIAEEIPILKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 604 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 605 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 656 >gi|328880835|emb|CCA54074.1| Predicted D-lactate dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 974 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 5/88 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRLY 225 C+ C C +CPS D P + R ++ D E RL + Sbjct: 570 ADPCIECGFCEPTCPS----QDLTTTPRQRIVLRREMMRQNDGSAVETRLLESYGYDAVD 625 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP G++ + + + Sbjct: 626 TCAGDSTCKLACPVGIDTGALMKEFRHE 653 >gi|325968018|ref|YP_004244210.1| dissimilatory sulfite reductase subunit D [Vulcanisaeta moutnovskia 768-28] gi|323707221|gb|ADY00708.1| dissimilatory sulfite reductase subunit D [Vulcanisaeta moutnovskia 768-28] Length = 472 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 16/128 (12%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 T K + E+ + + CV C C +CP+Y D Y P + Sbjct: 45 TDEKKVEYFRRRLLEEYENNKNVRMAVDVCVHCGQCLNACPTYITTGDPYNSPLGRAELI 104 Query: 201 RWLIDSRDEFQGERLDNLEDPFRL------------YRCHTIMNCTQSCPKGLNPAKAIA 248 R +I + + ++ + C C +CP G+ Sbjct: 105 RAVIKADKVSGKLFGRAVGAVKKIDMNYIKKIYTYYWLCLICRRCGYACPLGVEQTDVTR 164 Query: 249 KIKMMLLD 256 ++ +L + Sbjct: 165 VVRGILYE 172 >gi|323492348|ref|ZP_08097501.1| electron transport complex protein RnfC [Vibrio brasiliensis LMG 20546] gi|323313395|gb|EGA66506.1| electron transport complex protein RnfC [Vibrio brasiliensis LMG 20546] Length = 728 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + ++ C+ C C+ +CP+ L P L+ Sbjct: 350 SQVPITKTSNCILAPTRKEISPNQYEMACIRCGQCAEACPAS-------LLPQQLVWH-- 400 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E D E + C C CP + + Sbjct: 401 --------AKAEEFDKCE-ELNIKDCIECGACAFVCPSEIPLVQ 435 >gi|307138027|ref|ZP_07497383.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia coli H736] Length = 1039 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 537 WEKRNIAEEIPILKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 595 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 596 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 647 >gi|256022939|ref|ZP_05436804.1| putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein [Escherichia sp. 4_1_40B] gi|301647151|ref|ZP_07246973.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 146-1] gi|301074740|gb|EFK89546.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Escherichia coli MS 146-1] Length = 1174 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPILKEELCTQCNHCVAACP-HSAIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|281422077|ref|ZP_06253076.1| electron transport complex, RnfABCDGE type, C subunit [Prevotella copri DSM 18205] gi|281403866|gb|EFB34546.1| electron transport complex, RnfABCDGE type, C subunit [Prevotella copri DSM 18205] Length = 450 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ CA C +CP L +++ Y ERL+ Sbjct: 366 HRKKAQPCIRCAKCVDACPMGLEPY--LLATLSVVKDY------------ERLEA----E 407 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C +CP I K ++ Sbjct: 408 EVTSCIACGSCQFTCPSHRPILDNIINGKGAVM 440 >gi|48478477|ref|YP_024183.1| NADH dehydrogenase subunit I [Picrophilus torridus DSM 9790] gi|48431125|gb|AAT43990.1| NADH-quinone oxidoreductase chain I [Picrophilus torridus DSM 9790] Length = 170 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 7/124 (5%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 PLP L+ ++ Y + I T+ K + + C+ C Sbjct: 19 PLP-------LIGEIQTMYHVGKFIFKKPVTIQYPEEKGDIPERFRYRIFLSPESCIGCT 71 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C CP++ + + + A+ + +L C NC Sbjct: 72 LCQQICPNHSIKMEVWDLSSQNTGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCE 131 Query: 235 QSCP 238 + CP Sbjct: 132 EICP 135 >gi|327401007|ref|YP_004341846.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Archaeoglobus veneficus SNP6] gi|327316515|gb|AEA47131.1| Acetyl-CoA decarbonylase/synthase complex subunit alpha [Archaeoglobus veneficus SNP6] Length = 797 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 19/116 (16%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + I + K + + + + C C C +CP + D+ + Sbjct: 370 DKVGEIAVRVAMEIRKKKGKKPPFMSEEELKTEIDRCTGCMNCVFACP-HNLRIDKAMSA 428 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + +ED C C Q CP+ + I K Sbjct: 429 AK-------------DGDFSVFKTVED-----SCIACGRCEQVCPRDIRIVDVIMK 466 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + RC MNC +CP L KA++ K Sbjct: 403 IDRCTGCMNCVFACPHNLRIDKAMSAAK 430 >gi|288573372|ref|ZP_06391729.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569113|gb|EFC90670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 737 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 12/93 (12%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLG-PAILLQAYRWLID-SRDEFQGERLDNLEDPFR 223 C+ C C C + Y G P ++ Y + ++ R+ Sbjct: 287 EAARCLTCQC--LICHPWCLYLQEYGGSPRKYIRTYHNNLIINKGNRTANRM-------- 336 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C C + CP GL+ +A + + ++D Sbjct: 337 IDSCSLCGLCAEVCPTGLDVGQASLESRRKMVD 369 >gi|297584293|ref|YP_003700073.1| glycerol-3-phosphate dehydrogenase anaerobic subunit C [Bacillus selenitireducens MLS10] gi|297142750|gb|ADH99507.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Bacillus selenitireducens MLS10] Length = 407 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 10/93 (10%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C+ CP +D + + R+ + + Sbjct: 1 MQALYDTDFNPCLKCNACTVQCPVSAVTNDFGGPKHLGPELARFTSQQ---------EFI 51 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 DP + C C +CP+G++ A+ A +K Sbjct: 52 LDP-AIDLCTLCGTCDVTCPEGVHVAELTASLK 83 >gi|67527074|gb|AAY68343.1| putative FAD/FMN-containing dehydrogenases [uncultured marine bacterium 66A03] Length = 1001 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 39/143 (27%), Gaps = 14/143 (9%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P+ V + D S F R + P + + C C Sbjct: 544 PNKIVDAPKMDDRSLF----RFAPGYQADDLPVIFDWSSWPGKSGGLQGAIEMCNNNGAC 599 Query: 177 ST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 CPSY + + R + + D + L C + Sbjct: 600 RKLEVGVMCPSYRVTREERDSTRGRANSLRLALSGQLGPNALIGDEM--EETLKYCVSCK 657 Query: 232 NCTQSCPKGLNPAKA---IAKIK 251 C + CP ++ AK I ++ Sbjct: 658 ACKRECPTSVDMAKMKLEIIAMR 680 >gi|315180795|gb|ADT87709.1| electron transport complex protein RnfC [Vibrio furnissii NCTC 11218] Length = 824 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + D C+ C C+ +CP+ Y S+ E + Sbjct: 368 EIPQHDYEMACIRCGQCADACPASLLPQQLY-------------WHSKAEEYDK-----C 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L C C CP + + Sbjct: 410 EELNLKDCIECGACAYVCPSEIPLVQ 435 >gi|258514633|ref|YP_003190855.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778338|gb|ACV62232.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 320 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 22/95 (23%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C + + A R S + + Sbjct: 202 YWDMYFSRCLRCYACRNVCTACTCQECIFNQ-AKPAWVDRINNLSNNTS----FHLIRAF 256 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C + CP + + +L Sbjct: 257 HVAGRCVDCGECDRVCPVNIPL----RHLNQKILK 287 >gi|154497258|ref|ZP_02035954.1| hypothetical protein BACCAP_01551 [Bacteroides capillosus ATCC 29799] gi|150273657|gb|EDN00785.1| hypothetical protein BACCAP_01551 [Bacteroides capillosus ATCC 29799] Length = 452 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 36/124 (29%), Gaps = 8/124 (6%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ + D + C+ C C+ CP Y Sbjct: 222 KTTGNIIVLPPDHYLFRRATLSMDAIRHQAKSACIQCRMCTDLCPRYLIGH----QIRPH 277 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLL 255 L + E + E L D C C +CP GL+P K + +K L Sbjct: 278 LMMRNLWREKSVEDKEEYLATFGDAA---NCCDCGVCEMFACPMGLSPRKVNSYLKGELR 334 Query: 256 DRKI 259 R I Sbjct: 335 SRGI 338 >gi|329909311|ref|ZP_08275040.1| Putative fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase [Oxalobacteraceae bacterium IMCC9480] gi|327546511|gb|EGF31496.1| Putative fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase [Oxalobacteraceae bacterium IMCC9480] Length = 1330 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 860 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 919 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ + ++ +L Sbjct: 920 --ADHCTVCHKCLTPCPVDIDFGEVSMNMRNLL 950 >gi|327313771|ref|YP_004329208.1| pyruvate synthase [Prevotella denticola F0289] gi|326945207|gb|AEA21092.1| pyruvate synthase [Prevotella denticola F0289] Length = 1191 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C CS CP + + + D Sbjct: 675 YDKRGVAAFVPTWDAENCIQCNKCSFVCPHACIRP----FVLDEQEKAGFNDTTLDILAP 730 Query: 213 ERLDNLEDPFRLY--RCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 731 KQLKGMQFRIGVSVLDCTGCGNCADVCP 758 >gi|325860047|ref|ZP_08173174.1| pyruvate synthase [Prevotella denticola CRIS 18C-A] gi|325482573|gb|EGC85579.1| pyruvate synthase [Prevotella denticola CRIS 18C-A] Length = 1191 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C CS CP + + + D Sbjct: 675 YDKRGVAAFVPTWDAENCIQCNKCSFVCPHACIRP----FVLDEQEKAGFNDTTLDILAP 730 Query: 213 ERLDNLEDPFRLY--RCHTIMNCTQSCP 238 ++L ++ + C NC CP Sbjct: 731 KQLKGMQFRIGVSVLDCTGCGNCADVCP 758 >gi|323706136|ref|ZP_08117705.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534580|gb|EGB24362.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] Length = 504 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 19/100 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C +CP + + L P I + + + E L + + Sbjct: 131 NIDYDKCIECGRCKDACPYNAISDN--LRPCIRSCSAKAI------TMDEELKAAINYEK 182 Query: 224 LYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 C + CT +CP G ++ +AI K + Sbjct: 183 ---CTSCGACTVACPFGAITDKSYIVDIIRAIKSGKKVYA 219 >gi|319795435|ref|YP_004157075.1| fad linked oxidase domain protein [Variovorax paradoxus EPS] gi|315597898|gb|ADU38964.1| FAD linked oxidase domain protein [Variovorax paradoxus EPS] Length = 1304 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 832 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 891 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 892 --ADHCTVCHKCLTPCPVKIDFGDVSMNMRNLL 922 >gi|308173196|ref|YP_003919901.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7] gi|307606060|emb|CBI42431.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7] Length = 781 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ + LL + P + S C +C ++++G +C +KD Sbjct: 12 VEMEAADGQTVLQLLNNSSIDVPHVCYHPSLGPIETCDTCIVDVNGELVRSCSAQIKDGD 71 Query: 109 GAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKE 153 + L + + + + H +++ P K Sbjct: 72 IIDTLSSDVKKAQIIGMDNILHNHELYCTVCDYNNGSCEVHNTVKEMKINHQSIPFDQKP 131 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + +C++C C +C + D Sbjct: 132 YPKDESNPFYRYDPDQCILCGRCVEACQDVQVTETLSIDW--------------DRKHPR 177 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 + + + P C + +C+ CP Sbjct: 178 VIWDQDVPINESSCVSCGHCSTVCP 202 >gi|260769054|ref|ZP_05877988.1| electron transport complex protein RnfC [Vibrio furnissii CIP 102972] gi|260617084|gb|EEX42269.1| electron transport complex protein RnfC [Vibrio furnissii CIP 102972] Length = 875 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 18/86 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + D C+ C C+ +CP+ Y S+ E + Sbjct: 368 EIPQHDYEMACIRCGQCADACPASLLPQQLY-------------WHSKAEEYDK-----C 409 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAK 245 + L C C CP + + Sbjct: 410 EELNLKDCIECGACAYVCPSEIPLVQ 435 >gi|239817101|ref|YP_002946011.1| FAD linked oxidase [Variovorax paradoxus S110] gi|239803678|gb|ACS20745.1| FAD linked oxidase domain protein [Variovorax paradoxus S110] Length = 1292 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 820 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWEEFEDV 879 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 880 --ADHCTVCHKCLTPCPVKIDFGDVSMNMRNLL 910 >gi|186473080|ref|YP_001860422.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gi|184195412|gb|ACC73376.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 1005 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R + + E L + E Sbjct: 594 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLALSGQ--LGDEGLASQEVKD 651 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + + Sbjct: 652 TLDLCVSCKGCKRDCPTGIDMAKFKIEARAAWAQK 686 >gi|330014991|ref|ZP_08308024.1| pyruvate synthase [Klebsiella sp. MS 92-3] gi|328532424|gb|EGF59224.1| pyruvate synthase [Klebsiella sp. MS 92-3] Length = 1175 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEALCTQCNHCVAACP-HSAIRAKVVAPEEMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 731 MRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|303249217|ref|ZP_07335454.1| heterodisulfide reductase subunit C [Desulfovibrio fructosovorans JJ] gi|302489392|gb|EFL49343.1| heterodisulfide reductase subunit C [Desulfovibrio fructosovorans JJ] Length = 186 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 13/94 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + +C C C+ CP + Y P Q R + + + + Sbjct: 24 QKVSQCYQCGNCTAGCP----YTFAYDIPVS--QIMRLVQAGQ-------KKTILSSKSI 70 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C T +CT CP ++ A + ++ M Sbjct: 71 WLCATCESCTTRCPNNIDVACVMDVLRHMARREG 104 >gi|227540688|ref|ZP_03970737.1| FAD/FMN-containing dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183537|gb|EEI64509.1| FAD/FMN-containing dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] Length = 939 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 10/78 (12%) Query: 169 ECVMCACCSTS----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV + C + CPS+ D + L +GE +D L Sbjct: 531 RCVGVSACRSMEGAMCPSFQITHDEVHSTRGRARVLSELF------RGETVDGDGAEEAL 584 Query: 225 YRCHTIMNCTQSCPKGLN 242 C + C CP ++ Sbjct: 585 DLCLSCKACASECPVNVD 602 >gi|269839157|ref|YP_003323849.1| FAD linked oxidase [Thermobaculum terrenum ATCC BAA-798] gi|269790887|gb|ACZ43027.1| FAD linked oxidase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 1015 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 30/120 (25%), Gaps = 12/120 (10%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS----------TSCPS 182 Y ++ P +D CV C T CPS Sbjct: 522 YRLDENLRLGPTYDPPPVRTHFAFISDDGDFSKAALRCVGVGKCRRHGSQDPDDDTMCPS 581 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y + + ++ +G R + + L C C CP ++ Sbjct: 582 YMVTREEMHATRGRARLLFEMLQGNPLSEGWRSEAVR--EALDLCLACKGCKADCPVSVD 639 >gi|315229832|ref|YP_004070268.1| sulfhydrogenase II subunit b [Thermococcus barophilus MP] gi|315182860|gb|ADT83045.1| sulfhydrogenase II subunit b [Thermococcus barophilus MP] Length = 334 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 20/142 (14%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS--DRY 190 + + RS A L + + C+ C C+ CP+ D + Sbjct: 192 FEEKRSASFKKHLNKEGLADLLDLAFDSPVWKKYERICLGCGNCNMVCPTCRCYEVCDYW 251 Query: 191 LGPAILLQAYRW---------LIDSRDEFQGERLDNLE---------DPFRLYRCHTIMN 232 + ++ R+ L+ F+ RLD DP + C Sbjct: 252 VNAYEAVRVRRYDSCFMESHGLVAGGHNFRPTRLDRFRHRYYCKSYFDPSAGFNCVGCGR 311 Query: 233 CTQSCPKGLNPAKAIAKIKMML 254 C + CP + K + +I+ L Sbjct: 312 CDEFCPAKIEHVKVLDEIREAL 333 >gi|163782515|ref|ZP_02177512.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159882088|gb|EDP75595.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 359 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 22/130 (16%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQA 199 K + ++LL+ E + C+ C C+ CP+ Y + L + ++ Sbjct: 226 RKVETEGLPQKLLERLESPLWEEVAKRCLACGSCAMVCPTCFCYEVVDEVSLDGSESVRF 285 Query: 200 YRWLIDSRDEFQG-------------------ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 W + R+EF + F + C C CP G Sbjct: 286 RSWDVCFREEFSAIHGVPLRSSIASRYRQWLLHKFSYWVGQFGEFGCVGCGRCITWCPVG 345 Query: 241 LNPAKAIAKI 250 ++ + + ++ Sbjct: 346 IDITEEVGRL 355 >gi|90579150|ref|ZP_01234960.1| electron transport complex protein RnfC [Vibrio angustum S14] gi|90439983|gb|EAS65164.1| electron transport complex protein RnfC [Vibrio angustum S14] Length = 858 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L ++ C+ C+ C+ CPS L Q Y Sbjct: 351 SNVPITKITNCILAPKRKELPLHTYEMACIRCSACADVCPSSLLPQQ--LQWYAKDQNY- 407 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D+ + + L C C CP + + Sbjct: 408 ------DKC---------EEYNLKDCIECGACAYVCPSEIPLVQ 436 >gi|57642007|ref|YP_184485.1| cytosolic NiFe-hydrogenase, beta subunit [Thermococcus kodakarensis KOD1] gi|21327885|dbj|BAC00528.1| sulfhydrogenase beta subunit [Thermococcus kodakaraensis] gi|57160331|dbj|BAD86261.1| cytosolic NiFe-hydrogenase, beta subunit [Thermococcus kodakarensis KOD1] Length = 367 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 23/145 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V + + + F ++ + L E + C+ C C+T+ Sbjct: 184 EVTTEDICNFREFENKRSQAFKY-HEDWSNLRYLLELEMEHPMWEEQADLCLACGICNTT 242 Query: 180 CPS--------------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--DN 217 CP+ W+S ++ ++ + + +D F+ L ++ Sbjct: 243 CPTCRCYEVQDIVNLDGNTGYRERRWDSCQFRSHGLVAGGHNFRPTKKDRFRNRYLCKNS 302 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLN 242 + L C CT CP G++ Sbjct: 303 YNEKLGLSYCVGCGRCTYFCPAGIS 327 >gi|153833480|ref|ZP_01986147.1| sulfite reductase, subunit A [Vibrio harveyi HY01] gi|148870255|gb|EDL69190.1| sulfite reductase, subunit A [Vibrio harveyi HY01] Length = 342 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 64/206 (31%), Gaps = 31/206 (15%) Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV---YPLPHMSVIKDLVVDMS 130 + + S C M + T+ A D + + P+ S KD V+ S Sbjct: 131 VLIECSESFENCFCVSMGTNKTDNFAASVQFSDHGAIVTIKDPELTPYFSQGKD--VEHS 188 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSH-EDRQKIDGLYECVMCACCSTSCPSYW----- 184 + Q ++ + ++ + + C+ C C++SCP+ Sbjct: 189 VSFVQSNPVKVRTPDSVCDDSTKIREVLLGHPVWSEYDSRCIGCGRCTSSCPTCACFNVF 248 Query: 185 ---WNSDRYLGPAILLQAYRWLI--------DSRDEFQGERL-----DNLED----PFRL 224 +N + +G A + S GERL + D Sbjct: 249 DVVYNQEAKVGERRRQHASCMIDGFSDMAGGHSFRHKTGERLRYRALHKVNDFKSRQGEH 308 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C CP ++ + I K+ Sbjct: 309 HMCVGCGRCDDRCPHYISFSNIINKM 334 >gi|119357070|ref|YP_911714.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354419|gb|ABL65290.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeobacteroides DSM 266] Length = 337 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 44/154 (28%), Gaps = 21/154 (13%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 S I DL++D S + + + + ++ + + C+ C C+ Sbjct: 179 AFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCT 238 Query: 178 TSCPSYWWN-----SDRYLGPAILLQA----YRWLID-----SRDEFQGERLDNLEDPFR 223 CP+ D Y G + + R + F Sbjct: 239 FLCPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFN 298 Query: 224 LY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 + C CT+ CP + + + +I Sbjct: 299 YFPGKFDMNSCSGCGRCTRQCPVDMGITETLQEI 332 >gi|254511850|ref|ZP_05123917.1| formate dehydrogenase, alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221535561|gb|EEE38549.1| formate dehydrogenase, alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 927 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 28/173 (16%) Query: 82 EGICGSCGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVIKDLVV---------D 128 +G C +C + ++G TL + +++ +L+V Sbjct: 52 DGNCRACMVEVEGERTLVASCIRPAADGMVVKTDTDRAEKSRAMVMELLVADQPEEAHDR 111 Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPSYWWNS 187 SHF+ + + K A+++ + L C+ C C +C N Sbjct: 112 SSHFWDMAKLNDVSDSRFPAKEAEKIPLLDDSHVAMRVNLDACINCNLCVRACREVQVND 171 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +G A + + D +DP C C Q+CP G Sbjct: 172 --VIGMAGRGHTSQVVFD------------QQDPMGDSTCVACGECVQACPTG 210 >gi|170759049|ref|YP_001788076.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A3 str. Loch Maree] gi|169406038|gb|ACA54449.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A3 str. Loch Maree] Length = 1192 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L + +S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPVLLSDEEAKNAPKGFESKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AAGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|121534439|ref|ZP_01666262.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] gi|121306932|gb|EAX47851.1| protein of unknown function DUF224, cysteine-rich region domain protein [Thermosinus carboxydivorans Nor1] Length = 444 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 12/110 (10%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 R + L C C C+ C SY D PA +R + G L Sbjct: 38 RQMARSLMVMLETCTKCGACAKQCHSYLGTGDFNNIPAARADLFRKIYKRYFTVTGRLLA 97 Query: 217 NLEDPFR------------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C+ C CP G++ A+ + +L Sbjct: 98 RFSGAEDFDAETLGKWVTYFYQCNECRRCAVFCPFGIDTAEITIAARHIL 147 >gi|300087837|ref|YP_003758359.1| putative heterodisulfide reductase subunit C [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527570|gb|ADJ26038.1| putative heterodisulfide reductase, C subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 196 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 16/105 (15%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 L + C C C++ CP + P ++ A R + Sbjct: 14 PGHISELAGNIKAMHGVDANMCYQCGKCTSGCPLNEYMDMT---PTQVIHAVRLGL---- 66 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKI 250 D + + + C CT CP+ L A+A I Sbjct: 67 ------KDIVLNSNTYWLCVACGTCTGRCPQDTGLLMVMDALANI 105 >gi|229525628|ref|ZP_04415033.1| electron transport complex protein RnfC [Vibrio cholerae bv. albensis VL426] gi|229339209|gb|EEO04226.1| electron transport complex protein RnfC [Vibrio cholerae bv. albensis VL426] Length = 841 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|148977610|ref|ZP_01814186.1| electron transport complex protein RnfC [Vibrionales bacterium SWAT-3] gi|145963125|gb|EDK28393.1| electron transport complex protein RnfC [Vibrionales bacterium SWAT-3] Length = 964 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + + EC+ C+ C+ +CP+ ++L Q +W Sbjct: 353 PITKTSNCILAPTRREIAPSTYEMECIRCSACAEACPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + E L+ + C C CP + + + K + RK Sbjct: 402 KANELDKCEELN-------IKDCIECGACAFVCPSEIPLVQYYRQAKAEIKTRK 448 >gi|302562804|ref|ZP_07315146.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302480422|gb|EFL43515.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 467 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 22/126 (17%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW----------- 202 + S E + D C+ C C+ CP+ + + + A RW Sbjct: 338 MRDSLEAERWDDVTSRCLSCGNCTMVCPTCFCTTTEDVTDLTGDHAERWRRWDSCYDLDF 397 Query: 203 -LIDS---RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 L+ R L + C C CP G++ + A + Sbjct: 398 SLLHGGPVRATPHSRYRQWLTHKLGTWHDQFDSSGCVGCGRCIVWCPTGIDLTEEAAALH 457 Query: 252 MMLLDR 257 + Sbjct: 458 REASRK 463 >gi|293396004|ref|ZP_06640285.1| pyruvate-ferredoxin oxidoreductase [Serratia odorifera DSM 4582] gi|291421502|gb|EFE94750.1| pyruvate-ferredoxin oxidoreductase [Serratia odorifera DSM 4582] Length = 1177 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--ID--S 206 + ++ ++ I C C C +CP + + + P + A L +D + Sbjct: 670 TQWEKRNIAEQVPIWQAELCTQCNHCVAACP-HSAIRAKVVAPEAIADAPAGLQSLDVKA 728 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RD + L + C C + CP Sbjct: 729 RDMRGQKYLLQVAPED----CTGCNLCVEVCPAK 758 >gi|229515401|ref|ZP_04404860.1| electron transport complex protein RnfC [Vibrio cholerae TMA 21] gi|229347170|gb|EEO12130.1| electron transport complex protein RnfC [Vibrio cholerae TMA 21] Length = 800 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP ++L Q +W + + + E L+ L C Sbjct: 405 CIRCGQCAEACPV-----------SLLPQQLQWHAKAEEFDKCEELN-------LKDCIE 446 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + + K + R + Sbjct: 447 CGACAYVCPSEIPLVQYYRQAKAEIRTRSL 476 >gi|313672286|ref|YP_004050397.1| NADH-quinone oxidoreductase, chain i [Calditerrivibrio nitroreducens DSM 19672] gi|312939042|gb|ADR18234.1| NADH-quinone oxidoreductase, chain I [Calditerrivibrio nitroreducens DSM 19672] Length = 145 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 25/141 (17%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + L +++ L + + H + + + P H + G +CV Sbjct: 5 IDTLFFTEILQGLGITLKHMFK--KPVTLKYPFEKPIIFDRFRGIHYIKTDEKGNPKCVG 62 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C CPS + + GP ++ L RC Sbjct: 63 CYLCQKVCPSECIHIETDAGPNGERLIRKF------------------EIELDRCIYCGF 104 Query: 233 CTQSCPKGLNPAKAIAKIKMM 253 C ++CPK AI + Sbjct: 105 CEEACPK-----DAIHMGRRY 120 >gi|308064044|gb|ADO05931.1| NADH dehydrogenase subunit G [Helicobacter pylori Sat464] Length = 844 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 39/197 (19%) Query: 72 PTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYP---------LPHMSV 121 PT+ C + C C + +DG +C K+ + P + V Sbjct: 31 PTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILTNTPTLMDERKSIMQTYDV 90 Query: 122 IKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCS 177 L V D S P + ++ + + C+MC C Sbjct: 91 NHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAQALYDPNLCIMCERCV 150 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR----------- 226 T+C + L+A + + + D+F+ +D F ++ Sbjct: 151 TTCKDNVGEDN--------LKATKANLHAPDKFKDR---MSKDAFSVWSRKQKGIISFVG 199 Query: 227 ---CHTIMNCTQSCPKG 240 C+ C CP G Sbjct: 200 SVPCYDCGECIAVCPVG 216 >gi|240144004|ref|ZP_04742605.1| oxidoreductase, aldo/keto reductase family [Roseburia intestinalis L1-82] gi|257204040|gb|EEV02325.1| oxidoreductase, aldo/keto reductase family [Roseburia intestinalis L1-82] Length = 380 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 11/211 (5%) Query: 43 PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNT---LA 99 P M+ + ++ + ++ + E + G N+ G A Sbjct: 166 PEMEFVQLQINYYDWESENVQSRKCYEVAEKHGVPVIVMEPVKGGTLANMVGEPARILSA 225 Query: 100 CVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 ++ A+ LP++ ++ + D+ ++ + + Sbjct: 226 LDENASYASYAVRYAASLPNVILVLSGMSDLKQLQDNTAYMKDFQPLTDKEQQAIGKVVE 285 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + C C C CP D + + D +G + Sbjct: 286 E--LEKLPTIPCTNCRYCVEGCPKKIRIPDIF-----GVYNMGVQFGVTDVTRGSYRCQI 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + C C CP+ L K + + Sbjct: 339 DGSGKAGDCIKCGKCEAQCPQHLEIRKLLEE 369 >gi|222110008|ref|YP_002552272.1| fad linked oxidase domain-containing protein [Acidovorax ebreus TPSY] gi|221729452|gb|ACM32272.1| FAD linked oxidase domain protein [Acidovorax ebreus TPSY] Length = 1307 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L +A+ + +R ED Sbjct: 836 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGVSIRHWQEFEDV 895 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 896 --ADHCTVCHKCYSPCPVKIDFGDVTMNMRNLL 926 >gi|121593286|ref|YP_985182.1| FAD linked oxidase domain-containing protein [Acidovorax sp. JS42] gi|120605366|gb|ABM41106.1| FAD linked oxidase domain protein [Acidovorax sp. JS42] Length = 1307 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L +A+ + +R ED Sbjct: 836 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGVSIRHWQEFEDV 895 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 896 --ADHCTVCHKCYSPCPVKIDFGDVTMNMRNLL 926 >gi|55379012|ref|YP_136863.1| oxidoreductase [Haloarcula marismortui ATCC 43049] gi|55231737|gb|AAV47156.1| putative oxidoreductase [Haloarcula marismortui ATCC 43049] Length = 1021 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 14/137 (10%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST- 178 V + + + ++ + L+ D + C C C Sbjct: 566 EVESGAMPERARTVDMTENLRFDPEYEFDAGFDPALEWDNDNGMQGMVELCHGCGGCRGP 625 Query: 179 -------SCPSYWWNSDRYLGPAILLQAYRWLI--DSRDEFQGERLDNLEDPFRLYRCHT 229 CP+Y + + R + D D+ E + L C Sbjct: 626 QETTGGVMCPTYRASEEEMTTTRGRANMLRQAMSGDLPDDPTDEEFMH----EVLDLCIG 681 Query: 230 IMNCTQSCPKGLNPAKA 246 C + CP ++ AK Sbjct: 682 CKGCAKDCPSEVDMAKL 698 >gi|238020971|ref|ZP_04601397.1| hypothetical protein GCWU000324_00868 [Kingella oralis ATCC 51147] gi|237867951|gb|EEP68957.1| hypothetical protein GCWU000324_00868 [Kingella oralis ATCC 51147] Length = 489 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 25/86 (29%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP Y L+ +Y R E +G R N Sbjct: 218 WLFGHILREKVCLHMCP-YARFQSAMFDHDTLVISYDVE---RGEPRGARKKNASKEDTQ 273 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 274 LGDCINCTMCVQVCPTGIDIRDGLQY 299 >gi|289582102|ref|YP_003480568.1| hypothetical protein Nmag_2446 [Natrialba magadii ATCC 43099] gi|289531655|gb|ADD06006.1| protein of unknown function DUF162 [Natrialba magadii ATCC 43099] Length = 812 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 11/90 (12%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQGE 213 + ED Q + LY C+ C CS SC ++ G A W + Sbjct: 348 EMREDDQLRETLY-CIRCGACSNSCSNFQAVGGHGFGGETYSGGIATGWEAGVHGQDSAA 406 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ++L C C +CP ++ Sbjct: 407 EFNDL--------CTGCTRCVDACPVKIDI 428 >gi|71908532|ref|YP_286119.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dechloromonas aromatica RCB] gi|71848153|gb|AAZ47649.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Dechloromonas aromatica RCB] Length = 467 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 G + C CP Y P L+ AY +R + +G R + Sbjct: 199 AFATYGNAGFLRDQMCRQICP-YARFQFVMFDPDTLIIAYDT---ARGDARGPRAKGADP 254 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 255 KALGLGDCVDCGICVQVCPTGIDI 278 >gi|260062832|ref|YP_003195912.1| FAD linked oxidase-like protein [Robiginitalea biformata HTCC2501] gi|88784400|gb|EAR15570.1| FAD linked oxidase-like protein [Robiginitalea biformata HTCC2501] Length = 970 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 32/113 (28%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGP 193 + LL + + + +C C S CPSY Sbjct: 534 RYEPDREEPEPGTLLDFSDSQGILRAAEKCNGSGDCRKSHTMAGAMCPSYQATRRESDTT 593 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ G L++ F L C + C + CP ++ A Sbjct: 594 RGRANTLREMLTQYPGNNGFNRPELKEVFDL--CLSCKACARECPSNVDVATL 644 >gi|189500466|ref|YP_001959936.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium phaeobacteroides BS1] gi|189495907|gb|ACE04455.1| electron transport complex, RnfABCDGE type, C subunit [Chlorobium phaeobacteroides BS1] Length = 441 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP + + R+ + + L L C Sbjct: 364 RTCIRCGKCVDVCPQ-----------GLAPWLLANVAQLREFDEIQLL-------SLANC 405 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +CT CP I K ++ +R+ Sbjct: 406 TECGSCTYVCPSKRELVHWIKYAKALVNNRQ 436 >gi|300023557|ref|YP_003756168.1| cytochrome C oxidase accessory protein CcoG [Hyphomicrobium denitrificans ATCC 51888] gi|299525378|gb|ADJ23847.1| cytochrome c oxidase accessory protein CcoG [Hyphomicrobium denitrificans ATCC 51888] Length = 494 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + LL +YR D R E + R C C Sbjct: 234 CIYMCPWPRIQG-AMVDHDSLLISYR---DLRGEPRAAHKKGTTWDDR-GDCIDCRACVA 288 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 289 VCPMGIDIRD 298 >gi|254713067|ref|ZP_05174878.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti M644/93/1] gi|254716580|ref|ZP_05178391.1| cytochrome c oxidase accessory protein CcoG [Brucella ceti M13/05/1] gi|261218379|ref|ZP_05932660.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M13/05/1] gi|261320772|ref|ZP_05959969.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M644/93/1] gi|260923468|gb|EEX90036.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M13/05/1] gi|261293462|gb|EEX96958.1| cytochrome c oxidase cbb3 type accessory protein FixG [Brucella ceti M644/93/1] Length = 516 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLLKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTAATYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|224438402|ref|ZP_03659329.1| hypothetical protein HcinC1_10456 [Helicobacter cinaedi CCUG 18818] gi|313144843|ref|ZP_07807036.1| hypothetical protein HCCG_02039 [Helicobacter cinaedi CCUG 18818] gi|313129874|gb|EFR47491.1| hypothetical protein HCCG_02039 [Helicobacter cinaedi CCUG 18818] Length = 437 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY- 225 CV C C +C Y N D P +D ++ L+ ++ Sbjct: 8 ASACVKCGKCIPNCTIYMANRDEVTSPRGF-------LDLLGAYKRGDLELNSQSREIFE 60 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C CP L AI +++ + ++ Sbjct: 61 SCFLCTTCVTHCPSSLPVDVAIESVRVDIAEK 92 >gi|32266767|ref|NP_860799.1| hypothetical protein HH1268 [Helicobacter hepaticus ATCC 51449] gi|32262819|gb|AAP77865.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 966 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNLEDP- 221 D + +C+ C C CPS A+ + R + S+ + + L L++ Sbjct: 543 EDFINQCMECGFCEKVCPSKELTFTPRQRIAVRKEIKRLENLQSKSLEEEKWLKELKEGY 602 Query: 222 --FRLYRCHTIMNCTQSCPKGLNPAKA 246 F + C C CP ++ AK Sbjct: 603 VYFGIDTCAICSMCATLCPLEIDSAKI 629 >gi|85710368|ref|ZP_01041433.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Erythrobacter sp. NAP1] gi|85689078|gb|EAQ29082.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Erythrobacter sp. NAP1] Length = 515 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 4/77 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L + C CP L L+ Y+ D R E +G +L++P Sbjct: 241 LGGFMREQVCIYMCPWPRIQG-AMLDEKSLIVTYK---DWRGEKRGSLKKSLKNPDEYGD 296 Query: 227 CHTIMNCTQSCPKGLNP 243 C + C CP G++ Sbjct: 297 CVDCLQCVAVCPTGIDI 313 >gi|302548614|ref|ZP_07300956.1| oxidoreductase, FAD-binding [Streptomyces hygroscopicus ATCC 53653] gi|302466232|gb|EFL29325.1| oxidoreductase, FAD-binding [Streptomyces himastatinicus ATCC 53653] Length = 979 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 9/132 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + VV R W + + CV C Sbjct: 464 PGNRMNPGKVVTPHGVDDNLRLGPHWRPRTVATHFGY---PDDQGSFAQAVMRCVGIGNC 520 Query: 177 STS-----CPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTI 230 + CPSY + + +++ D + + E L C Sbjct: 521 RSHRGGVMCPSYRATGEEEHSTRGRARLLFEMLEGHTDSTVADGWRSTEVRDALDLCLAC 580 Query: 231 MNCTQSCPKGLN 242 C CP G++ Sbjct: 581 KGCKSDCPVGVD 592 >gi|157370844|ref|YP_001478833.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Serratia proteamaculans 568] gi|157322608|gb|ABV41705.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Serratia proteamaculans 568] Length = 1177 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 3/91 (3%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-E 209 + ++ + I C C C +CP + + + P + A L S D + Sbjct: 670 TQWEKRNIAEAIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMENAPASL-QSLDVK 727 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R C C + CP Sbjct: 728 ARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|73667753|ref|YP_303768.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina barkeri str. Fusaro] gi|72394915|gb|AAZ69188.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanosarcina barkeri str. Fusaro] Length = 806 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 26/90 (28%), Gaps = 19/90 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + + +C C C +CP + +Y LD L Sbjct: 407 DEEFTNWVMKCADCGACMIACPEELDIPEAMGFAKEGDYSY--------------LDILH 452 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D C C Q C K + I K Sbjct: 453 DQ-----CIGCRRCEQVCKKEIPILNIIEK 477 >gi|117928223|ref|YP_872774.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648686|gb|ABK52788.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 389 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 22/135 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 + + + L ++ E Q D C+ C C+ +CP S +D G Sbjct: 245 GRMGRQLDTRDLPELLARNLEHPQWDDVAARCLSCGNCTLACPTCFCFSVEDTTDLLDGA 304 Query: 194 AILLQAYRW---LIDS-------RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQS 236 A + + L S R + L + C C Sbjct: 305 AQRSRVWASCFSLEHSYIHGGSVRASAKARYRQWLTHKLGTWWEQFGTAGCVGCGRCITW 364 Query: 237 CPKGLNPAKAIAKIK 251 CP G++ A I+ Sbjct: 365 CPVGIDITAEAAAIR 379 >gi|311109276|ref|YP_003982129.1| FAD linked oxidase C-terminal domain-containing protein 6 [Achromobacter xylosoxidans A8] gi|310763965|gb|ADP19414.1| FAD linked oxidase, C-terminal domain protein 6 [Achromobacter xylosoxidans A8] Length = 1319 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLKHWEEFEDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCYNPCPVDIDFGDVSMNMRAVL 943 >gi|309776462|ref|ZP_07671448.1| putative electron transport complex, RnfABCDGE type, C subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308915853|gb|EFP61607.1| putative electron transport complex, RnfABCDGE type, C subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 433 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS CP+ L P + QA + D+ E+L ++ C Sbjct: 362 CLRCGKCSDHCPA-------GLQPVRIAQAVKTN----DKKAMEKLCAMD-------CIE 403 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT CP L+ + + + K L+ K Sbjct: 404 CGLCTYICPSRLDVTENVRRAKRQLMLAK 432 >gi|297519204|ref|ZP_06937590.1| predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain [Escherichia coli OP50] Length = 151 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 16/35 (45%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 Y C C CP + +K I + + ++ ++ I Sbjct: 36 YACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGI 70 >gi|293602363|ref|ZP_06684809.1| FAD/iron-sulfur cluster-binding domain protein [Achromobacter piechaudii ATCC 43553] gi|292819125|gb|EFF78160.1| FAD/iron-sulfur cluster-binding domain protein [Achromobacter piechaudii ATCC 43553] Length = 1319 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 853 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLKHWEEFEDV 912 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 913 --ADHCTVCHKCYNPCPVDIDFGDVSMNMRAVL 943 >gi|160903101|ref|YP_001568682.1| aldo/keto reductase [Petrotoga mobilis SJ95] gi|160360745|gb|ABX32359.1| aldo/keto reductase [Petrotoga mobilis SJ95] Length = 377 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 7/140 (5%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + ++ MS +I+ + +++ L++ E + I + C C+ Sbjct: 243 NHPEVTTVLSGMSTMEQVIENIKTADDSDQNSLSEKELKAIEQVRNIYKSKSKIDCTGCN 302 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR--CHTIMNCTQ 235 P + + ++ D+ E + ER L + C +C Sbjct: 303 YCVPCKNGIPIPTIF---SIYNEGYIFDNLIEAK-ERYQTLI-KQGIDASICEECGDCEA 357 Query: 236 SCPKGLNPAKAIAKIKMMLL 255 CP+ L + ++K L Sbjct: 358 ECPQHLPIRSLLKQVKNELA 377 >gi|332299855|ref|YP_004441776.1| Electron transport complex protein rnfC [Porphyromonas asaccharolytica DSM 20707] gi|332176918|gb|AEE12608.1| Electron transport complex protein rnfC [Porphyromonas asaccharolytica DSM 20707] Length = 450 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 18/92 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +++C+ C C + CP L PA L+ RD + + Sbjct: 369 RPEMHDCIRCGKCVSVCPM-------GLNPAFLM---------RDTIYKDW--ESTEHNY 410 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C+ +CP G I K ++ Sbjct: 411 IADCIECGSCSYTCPAGRPLLDYIRVGKQTVM 442 >gi|310643155|ref|YP_003947913.1| molybdopterin oxidoreductase family protein [Paenibacillus polymyxa SC2] gi|309248105|gb|ADO57672.1| Molybdopterin oxidoreductase family protein [Paenibacillus polymyxa SC2] Length = 980 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 39/161 (24%), Gaps = 19/161 (11%) Query: 83 GICGSCGMN-IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + SC +G N K + L + + + + + H + E Sbjct: 59 KLVRSCSTLATNGMNIHLHSDRAKAAQTEAMDRLLENHLLYCTVCDNNNGNCKLHNTAEL 118 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILL 197 P + + E C+ C C C + N L Sbjct: 119 MEIEHQKYPYRPKVDPTEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAER 178 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D + D C + C CP Sbjct: 179 P--RVIWDEGV--------AINDS----SCVSCGQCVTVCP 205 >gi|159045864|ref|YP_001534658.1| D-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157913624|gb|ABV95057.1| D-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 973 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 42/164 (25%), Gaps = 11/164 (6%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + P + K + R + Sbjct: 498 PQMVASFNEVKDRFDPNRLFNPGKIVQPPKMDDRRLFRYGPDYTVKPMKTALDWSAWPGA 557 Query: 160 DRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + C C CPSY + + R I + Sbjct: 558 GGGFQGAVEMCNNNGACRKLKGGVMCPSYRVTRNERDVVRGRANSLRLAISGQLGPDAFA 617 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D++ +L C + C + CP G++ +AK+K+ +L + Sbjct: 618 SDDMVSAMKL--CVSCKGCKRECPTGVD----MAKMKIEVLAAR 655 >gi|20089891|ref|NP_615966.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina acetivorans C2A] gi|38503088|sp|Q8TRZ4|ACDA1_METAC RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 1; Short=ACDS complex subunit alpha 1; AltName: Full=ACDS complex carbon monoxide dehydrogenase 1; Short=ACDS CODH 1 gi|19914844|gb|AAM04446.1| carbon-monoxide dehydrogenase, subunit alpha [Methanosarcina acetivorans C2A] Length = 806 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 20/121 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I ++ + A+ + D + D + +C C C +CP + Sbjct: 386 IRLTMEMGPIRDAEGITAIPTDEEFADWVAKCADCGACMIACPEELDIPEAMGFAKEGDF 445 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI-KMMLLDR 257 +Y L+ L D C C Q C K + I K+ + + + Sbjct: 446 SY--------------LEELHDQ-----CIGCRRCEQVCKKEIPILNIIEKVAQKQIAEE 486 Query: 258 K 258 K Sbjct: 487 K 487 >gi|189346714|ref|YP_001943243.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] gi|189340861|gb|ACD90264.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 337 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 21/119 (17%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPS-----YWWNSDRYLGPAILLQA----YRWL 203 + ++ E + C+ C C+ CP+ + D Y G + Sbjct: 214 QNPENFESHFWKEISMRCIGCGTCTFLCPTCHCFDFQDEGDTYTGIRRKNWDSCSFALFT 273 Query: 204 ID-----SRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + R + F L C CT+ CP + + + +I Sbjct: 274 MHTSGHNPRSTQSARWRQRIMHKFNYFPGKFNLNSCSGCGRCTRECPVDMGITETLQEI 332 >gi|313897601|ref|ZP_07831143.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium sp. HGF2] gi|312957553|gb|EFR39179.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium sp. HGF2] Length = 430 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 18/89 (20%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C CS CP+ L P + QA + D+ E+L ++ C Sbjct: 359 CLRCGKCSDHCPA-------GLQPVRIAQAVKTN----DKKAMEKLCAMD-------CIE 400 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT CP L+ + + + K L+ K Sbjct: 401 CGLCTYICPSRLDVTENVRRAKRQLMLAK 429 >gi|293606396|ref|ZP_06688756.1| cytochrome c oxidase accessory protein CcoG [Achromobacter piechaudii ATCC 43553] gi|292815256|gb|EFF74377.1| cytochrome c oxidase accessory protein CcoG [Achromobacter piechaudii ATCC 43553] Length = 496 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFR 223 G + + C CP Y + P + Y + D R + Sbjct: 226 WGNAGFMRESVCKYMCP-YARFQSVMVDPDTFVVTYDKRRGDPRGGRSRKVDHKAA---G 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C Q CP G++ + + Sbjct: 282 MGDCVDCSLCVQVCPTGIDIRDGLQYM 308 >gi|257452980|ref|ZP_05618279.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 3_1_5R] gi|317059520|ref|ZP_07924005.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. 3_1_5R] gi|313685196|gb|EFS22031.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. 3_1_5R] Length = 436 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 22/144 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 Y L V ++ V + + + K LL + C+ C Sbjct: 309 YLLDACGVDREKVDKLVMGGPMMGMAQFSEEAPVIKGTSGLLALTTEETNPYKPKACIGC 368 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C + CP L P + + + ++ + L++ L C +C Sbjct: 369 GKCVSVCPMS-------LEPVMFARLAAF----------QQWEGLQNYH-LMDCIECGSC 410 Query: 234 TQSCPKGLNPAKAI----AKIKMM 253 CP +AI AK++ M Sbjct: 411 AFICPANRPLTEAIKIGKAKLRSM 434 >gi|241113248|ref|YP_002973083.1| ferredoxin III, nif-specific [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861456|gb|ACS59122.1| ferredoxin III, nif-specific [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 97 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 7/73 (9%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C C R + + ++D+ D E L RC Sbjct: 23 ASCIGCGRCFKVC-------SRDVMHLGGITDSGDIVDAGDGADDEVERLLMIVDHPGRC 75 Query: 228 HTIMNCTQSCPKG 240 C + CPK Sbjct: 76 IGCGACARVCPKN 88 >gi|207723231|ref|YP_002253630.1| iron-sulfur 4fe-4s ferredoxin protein [Ralstonia solanacearum MolK2] gi|206588427|emb|CAQ35390.1| iron-sulfur 4fe-4s ferredoxin protein [Ralstonia solanacearum MolK2] Length = 487 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 31/110 (28%), Gaps = 16/110 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 E W ++ P +L G + C CP S + D Y+ Sbjct: 194 AEVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT 250 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + SR E R L C C Q CP G++ Sbjct: 251 YDAERGEPRGNRSRSEDFAAR--------GLGACVDCSICVQVCPTGIDI 292 >gi|51892034|ref|YP_074725.1| Na+-transporting NADH-quinone reductase subunit 1 [Symbiobacterium thermophilum IAM 14863] gi|51855723|dbj|BAD39881.1| Na+-transporting NADH-quinone reductase subunit 1 [Symbiobacterium thermophilum IAM 14863] Length = 446 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 18/95 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C +CP L PA L A + D ER Sbjct: 360 EDLDETPAGPCIRCGRCVAACPM-------GLLPARLCSAAL----AGDWGAAER----- 403 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + C +C+ CP ++I K L Sbjct: 404 --YHVRACMECGSCSYVCPARRPLVQSIRLAKYEL 436 >gi|121603689|ref|YP_981018.1| FAD linked oxidase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120592658|gb|ABM36097.1| FAD linked oxidase domain protein [Polaromonas naphthalenivorans CJ2] Length = 1265 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 794 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISLKHWEEFEDV 853 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ + ++ +L Sbjct: 854 --ADHCTVCHKCLNPCPVDIDFGEVSMNMRNLL 884 >gi|288933735|ref|YP_003437794.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Klebsiella variicola At-22] gi|288888464|gb|ADC56782.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Klebsiella variicola At-22] Length = 450 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDEHTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|255524552|ref|ZP_05391506.1| aldo/keto reductase [Clostridium carboxidivorans P7] gi|296185800|ref|ZP_06854207.1| oxidoreductase, aldo/keto reductase family protein [Clostridium carboxidivorans P7] gi|255511705|gb|EET87991.1| aldo/keto reductase [Clostridium carboxidivorans P7] gi|296049628|gb|EFG89055.1| oxidoreductase, aldo/keto reductase family protein [Clostridium carboxidivorans P7] Length = 374 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 43/167 (25%), Gaps = 12/167 (7%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 + + A + L MS + ++ + + Sbjct: 220 KANEKASYASWAIRFAASLDGVITVLSGMS-------NREQMEDNLSYMKNFTSLSKLER 272 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 LQ + L C C C+ CP+ S + + + + Sbjct: 273 DT--LQEAQKVLNNIPLIPCTSCNYCAKVCPNNIGISGSF---TAMNYLTLYKNEESART 327 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Q L + C C + CP+ + K + K+ + Sbjct: 328 QENWLVSGHGKKSACECIKCGKCEEVCPQHIAIRKELVKVNNAFAKK 374 >gi|254425853|ref|ZP_05039570.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Synechococcus sp. PCC 7335] gi|196188276|gb|EDX83241.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Synechococcus sp. PCC 7335] Length = 1256 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 6/104 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + ++ + CV CA C CP + + P++L +A + + + Sbjct: 690 PTGTTQWEKRNIAQSIPVWDPEVCVQCAKCVMVCP-HSVIRAKAYDPSLLRKAPKTFLHT 748 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP---KGLNPAKAI 247 + L+ C C CP K + KAI Sbjct: 749 EAREWEGKAFTLQVAAE--DCTGCGICVDVCPAKNKAVPRLKAI 790 >gi|149372827|ref|ZP_01891848.1| probable oxidoreductase [unidentified eubacterium SCB49] gi|149354524|gb|EDM43089.1| probable oxidoreductase [unidentified eubacterium SCB49] Length = 975 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 19/148 (12%) Query: 116 LPHMSVIKDLVVDMSHF--YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDG------- 166 + + K + ++ + +E + + + + L D + Sbjct: 498 EKNYDLFKTIKTTFDPHNIFNPGKIVEAYPMDEALRYVPDALVKEIDTKFDFSDSQGLLR 557 Query: 167 -LYECVMCACCSTS-------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C C + CPSY + R + + D +L Sbjct: 558 LAEKCNGSGDCRKTERSFGVMCPSYQATKNEKDSTRGRANVLRETLTNSDTINAFDSKDL 617 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 ++ F L C + C CP ++ A A Sbjct: 618 KEVFDL--CISCKACANECPSNVDMATA 643 >gi|325479368|gb|EGC82464.1| pyruvate synthase [Anaerococcus prevotii ACS-065-V-Col13] Length = 1178 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 15/112 (13%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P ++ + + C+ C CS CP + P +L + + Sbjct: 666 QYMPGTSQYEKRGIALFVPEWKIENCIQCNQCSFVCP------HATIRPFLLDEEAKKNA 719 Query: 205 DSRDEFQGERLDNLEDPF-----RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 E + LE+ Y C NC CP P KA+ ++K Sbjct: 720 PEGFETKKAIGKGLENYEFRIQVSPYDCMGCGNCVDVCPA---PTKAL-EMK 767 >gi|313886233|ref|ZP_07819962.1| electron transport complex, RnfABCDGE type, C subunit [Porphyromonas asaccharolytica PR426713P-I] gi|312924304|gb|EFR35084.1| electron transport complex, RnfABCDGE type, C subunit [Porphyromonas asaccharolytica PR426713P-I] Length = 450 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 18/92 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +++C+ C C + CP L PA L+ RD + + Sbjct: 369 RPEMHDCIRCGKCVSVCPM-------GLNPAFLM---------RDTIYKDW--ESTEHNY 410 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C+ +CP G I K ++ Sbjct: 411 IADCIECGSCSYTCPAGRPLLDYIRVGKQTVM 442 >gi|306817876|ref|ZP_07451615.1| NADH-quinone oxidoreductase subunit I [Mobiluncus mulieris ATCC 35239] gi|304649355|gb|EFM46641.1| NADH-quinone oxidoreductase subunit I [Mobiluncus mulieris ATCC 35239] Length = 291 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 42/140 (30%), Gaps = 17/140 (12%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A K + K L + V +F+ + + H Sbjct: 38 ADPKLWEPTKKGFIAEQLKA---VAGFGVTFRNFFRPY--VTEQWPFEKVPTQPRYHGRH 92 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + DGL +C+ C C+ +CP+ + GER + Sbjct: 93 QLNRYPDGLEKCIGCELCAWACPADAIYVEAASNTPEAQH-----------SPGERYGRV 141 Query: 219 EDPFRLYRCHTIMNCTQSCP 238 L RC CT++CP Sbjct: 142 YQINYL-RCIFCGMCTEACP 160 >gi|226359900|ref|YP_002777678.1| FAD-linked oxidase [Rhodococcus opacus B4] gi|226238385|dbj|BAH48733.1| putative FAD-linked oxidase [Rhodococcus opacus B4] Length = 954 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 H+D ++ C C CPSY + + + +I+ Sbjct: 534 HHDDGDFTQAVHRCTGVGKCRADNTATGGVMCPSYQATREEKDSTRGRARVLQEMINGTA 593 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C+ CP G++ Sbjct: 594 VEGGWRSPEVHDA--LDLCLSCKGCSSDCPTGVD 625 >gi|288919210|ref|ZP_06413547.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Frankia sp. EUN1f] gi|288349380|gb|EFC83620.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Frankia sp. EUN1f] Length = 1175 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 24/79 (30%), Gaps = 7/79 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDP 221 CV C C+ CP + PA L A +R + RL P Sbjct: 682 WDAELCVSCGKCAIVCP-HAAIRMTLFDPARLADAPATFRHTRPKDPRLGDYRLTIQVAP 740 Query: 222 FRLYRCHTIMNCTQSCPKG 240 C C ++CP Sbjct: 741 D---DCTGCGVCVEACPAK 756 >gi|257457105|ref|ZP_05622282.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Treponema vincentii ATCC 35580] gi|257445484|gb|EEV20550.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Treponema vincentii ATCC 35580] Length = 1184 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 30/106 (28%), Gaps = 8/106 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL--QAYRWLI 204 + ++ + I C+ C C+ CP Y I A+R + Sbjct: 673 PTATTQYEKRAIAEHIPIWKSELCIQCGQCTVVCPHAAIRMKVYDKSNIDHAPSAFRSIP 732 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP---KGLNPAKAI 247 EF P C C + CP K +AI Sbjct: 733 YKGKEFDNSLFTIQVSPE---DCTGCGICVEQCPAKSKENPAIRAI 775 >gi|217979113|ref|YP_002363260.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Methylocella silvestris BL2] gi|217504489|gb|ACK51898.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Methylocella silvestris BL2] Length = 1217 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 25/102 (24%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL--------------GPAILLQ 198 ++ D I C+ C CS +CP + Y + + Sbjct: 693 WEKRNIADEVPIWETDLCIQCGQCSIACPHSVIRARFYDEARLADPNEPAPPTFKSAPVN 752 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A R DSR Q F + C C + CP Sbjct: 753 A-RGYPDSRFTLQ----------FYVEDCTGCGICVEVCPAH 783 >gi|113868290|ref|YP_726779.1| polyferredoxin [Ralstonia eutropha H16] gi|113527066|emb|CAJ93411.1| Polyferredoxin [Ralstonia eutropha H16] Length = 492 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 28/104 (26%), Gaps = 8/104 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + +L G + C CP Y + + Y Sbjct: 205 GPWQSFWMLFY---AFATWGNAGFMREQVCKYMCP-YARFQSVMVDRDTYVVTYDV---G 257 Query: 207 RDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 R E +G R L C C Q CP G++ + Sbjct: 258 RGEPRGSRSRKTDHHKAGLGDCVNCSICVQVCPTGIDIRDGLQY 301 >gi|300691033|ref|YP_003752028.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] gi|299078093|emb|CBJ50736.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] Length = 163 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + L Sbjct: 31 RKITVLFPEEKTPLSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESDLRDDGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 91 RRTTRYDID------------------LTKCIFCGFCEEACPVD 116 >gi|297625387|ref|YP_003687150.1| Pyruvate synthase/Pyruvate-flavodoxin oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921152|emb|CBL55699.1| Pyruvate synthase/Pyruvate-flavodoxin oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1255 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 42/153 (27%), Gaps = 27/153 (17%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA----KELLQSH 158 K + P+P + V + Q S+ + ++ Sbjct: 676 PAKVTSTEDYLPPVPSFAPDFVKDVTAAMMTEQGESLPVSKLPADGSFPSGTTQYEKRNV 735 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER---- 214 + + C+ C C+ CP +L+A + D D+ Sbjct: 736 SEIIAVWDQDNCIQCGNCAFVCP------------HGVLRAKYYKPDVLDDAPKSFQAVP 783 Query: 215 LDNLEDPFRLY-------RCHTIMNCTQSCPKG 240 L+ P +Y C C ++CP Sbjct: 784 LNAAGLPDEMYTLQVFAEDCTGCGLCVEACPVH 816 >gi|71083382|ref|YP_266101.1| formate dehydrogenase subunit alpha (fdhF-2) [Candidatus Pelagibacter ubique HTCC1062] gi|71062495|gb|AAZ21498.1| formate dehydrogenase Alpha subunit (fdhF-2) [Candidatus Pelagibacter ubique HTCC1062] Length = 922 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 22/117 (18%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 +PK K + + L C+ C C +C L + + Sbjct: 136 NTPKQHKGIPRDTSHDYMRMNLDNCINCGRCVRACDEIQ--GSFVLTMSGRG------FE 187 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI---KMMLLDRKI 259 S+ + L F C + C +CP AI+ + K + +D+K+ Sbjct: 188 SKITTDNDAL------FGDSSCVSCGACAHTCP-----TDAISDVYQSKSVAVDKKV 233 >gi|134299193|ref|YP_001112689.1| formate dehydrogenase [Desulfotomaculum reducens MI-1] gi|134051893|gb|ABO49864.1| formate dehydrogenase, beta subunit (F420) [Desulfotomaculum reducens MI-1] Length = 370 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 8/85 (9%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF-----QGERLDNL--E 219 L C+ C C +CP + GP ++L ++ + L +L Sbjct: 243 LATCIKCQNCRQACPICFCRECVSAGPIFDHNGDKYLEYAKRKGAIELPTDTTLFHLTRV 302 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPA 244 + L C C +CP + Sbjct: 303 NHMGL-SCVGCGQCENACPMNIPVG 326 >gi|255523188|ref|ZP_05390159.1| protein of unknown function DUF224 cysteine-rich region domain protein [Clostridium carboxidivorans P7] gi|296186155|ref|ZP_06854560.1| cysteine-rich domain protein [Clostridium carboxidivorans P7] gi|255513056|gb|EET89325.1| protein of unknown function DUF224 cysteine-rich region domain protein [Clostridium carboxidivorans P7] gi|296049423|gb|EFG88852.1| cysteine-rich domain protein [Clostridium carboxidivorans P7] Length = 380 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%) Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DP Y C+T CT+ CPKGL + ++ + Sbjct: 55 DPNIPYSCNTCGTCTKVCPKGLKLEELFVDMRKEHIR 91 >gi|167768984|ref|ZP_02441037.1| hypothetical protein ANACOL_00305 [Anaerotruncus colihominis DSM 17241] gi|167668624|gb|EDS12754.1| hypothetical protein ANACOL_00305 [Anaerotruncus colihominis DSM 17241] Length = 976 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 20/102 (19%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + +L HED + ++ C+ C+ C+ +CP L P YR + +R Sbjct: 256 TPSTRAILAFHEDFKNLNI--GCIGCSRCAHACP-------EGLNP---FYLYRSI-QNR 302 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 LD C C+ CP L+ ++ I + Sbjct: 303 RYGLFRVLDAQM-------CIGCGTCSYVCPSKLDLSETIQR 337 >gi|163857553|ref|YP_001631851.1| hypothetical protein Bpet3241 [Bordetella petrii DSM 12804] gi|163261281|emb|CAP43583.1| unnamed protein product [Bordetella petrii] Length = 506 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 G + + C CP Y + P + Y R + +G R ++ Sbjct: 235 WGNAGFMRESVCKYMCP-YARFQSVMVDPDTFVVTYDK---GRGDPRGGRSRKIDHKAAG 290 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C Q CP G++ + + Sbjct: 291 MGDCVDCSLCVQVCPTGIDIRDGLQYM 317 >gi|254173035|ref|ZP_04879709.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Thermococcus sp. AM4] gi|214033191|gb|EEB74019.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Thermococcus sp. AM4] Length = 334 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 20/109 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWW------NSDRYLGPAILLQAYRWLI------------ 204 + +C+ C C+ CP+ D Y ++ Sbjct: 222 WKEYAEKCLACGNCNLVCPTCRCYEVCDRWVDAYRAVRERRYDSCFMESHGLVAGGHNFR 281 Query: 205 DSRDEFQGERL--DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R + R + DP + C C + CP G+ K + +I+ Sbjct: 282 PTRLDRFRHRYYCKSYFDPSAGFNCVGCGRCDEFCPAGIEHVKVLDEIR 330 >gi|322807070|emb|CBZ04644.1| pyruvate-flavodoxin oxidoreductase [Clostridium botulinum H04402 065] Length = 1192 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPVLLTDEEVKNAPEGFKSKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AAGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|121998737|ref|YP_001003524.1| hypothetical protein Hhal_1958 [Halorhodospira halophila SL1] gi|121590142|gb|ABM62722.1| protein of unknown function DUF224, cysteine-rich region domain protein [Halorhodospira halophila SL1] Length = 517 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 21/157 (13%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-----DRQKIDGLYECV 171 PHM V S+H+ + + + L E +R + CV Sbjct: 21 PHMETEATGHVRPHPASSEHQQALGFPGEIPEDWQERALARMETLLERNRSLRVYMDACV 80 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSRD--------EFQGERLDN 217 C C+ C Y SD P R + R+ E E ++ Sbjct: 81 RCGACTDKCHFYLGTSDPQNMPVARQDLMRDVYRRHFTPAGRNFPSLVRGRELTREVMEA 140 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++C C+ CP G++ A+ + +L Sbjct: 141 WFTY--FHQCSQCRRCSVFCPYGIDTAEISMAAREIL 175 >gi|288962886|ref|YP_003453180.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288915152|dbj|BAI76636.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 505 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 23/86 (26%), Gaps = 6/86 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + L L+ Y+ D D +R D Sbjct: 222 AGMTYVMAGWTREQMCMYMCP-WPRIQSAMLDEHSLVVTYQ--ADRGDNRGPKRKSQSWD 278 Query: 221 P---FRLYRCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 279 ERRAQGFGDCIDCGQCVQVCPIGIDV 304 >gi|213586351|ref|ZP_03368177.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 62 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 GM ++ LAC ++D + V L + + +DLV+DM+HF +I+P++ S Sbjct: 1 GMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVIDMTHFIESLEAIKPYIIGNSR 60 >gi|164687861|ref|ZP_02211889.1| hypothetical protein CLOBAR_01505 [Clostridium bartlettii DSM 16795] gi|164603136|gb|EDQ96601.1| hypothetical protein CLOBAR_01505 [Clostridium bartlettii DSM 16795] Length = 452 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + S K +L E++ +I C+ C C+ CP+ +L P Sbjct: 334 MMGNTQYTTQAASTKGTSGILCLSEEKARIPEPTACLRCGRCTEVCPA-------FLQPL 386 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ + + +R + R C +C+ CP ++I K + Sbjct: 387 -------YISANSLKGDFDRAE----EHRALDCIECGSCSFICPARRPLVESIRNAKRQI 435 Query: 255 LDRK 258 ++ Sbjct: 436 QAKR 439 >gi|146342337|ref|YP_001207385.1| putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] gi|146195143|emb|CAL79168.1| Putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] Length = 497 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 23/86 (26%), Gaps = 7/86 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 GL C+ CP + + P YR D R E + E Sbjct: 228 AGTTYGLAGFAREQVCTFMCPWPRFQGAIWD-PQAFTVNYR---DYRGEVRMSVKKAAEA 283 Query: 221 ---PFRLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 284 RALGEPAGDCVDCGACVAVCPIGIDI 309 >gi|319777796|ref|YP_004134226.1| cytochrome c oxidase accessory protein ccog [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171515|gb|ADV15052.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 521 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 19/82 (23%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 + C+ CP D R E + ++ Sbjct: 219 YTFGGLMREQVCTYMCP----WPRIQAAMLDESSLTVTYNDWRGEPRSRHAKKVQAAGQS 274 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 275 VGDCVDCNACVAVCPMGIDIRD 296 >gi|283852917|ref|ZP_06370177.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfovibrio sp. FW1012B] gi|283571675|gb|EFC19675.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfovibrio sp. FW1012B] Length = 1217 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 23/80 (28%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L + D+ E L L Sbjct: 682 PHWIKENCIQCNQCSLVCP--HATIRPFLADEAEMAGAPASYDTLPASGKE-LKGLAYRM 738 Query: 223 RLY--RCHTIMNCTQSCPKG 240 +++ C +C CP Sbjct: 739 QVFPMDCMGCGSCADVCPAK 758 >gi|288802771|ref|ZP_06408209.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella melaninogenica D18] gi|288334921|gb|EFC73358.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella melaninogenica D18] Length = 1191 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 6/78 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-- 220 C+ C CS CP + + ++ D ++L ++ Sbjct: 685 PKWDAENCIQCNKCSYVCPHACIRP----FVLDEAEKANFNEETLDVIAPKQLKGMQFRI 740 Query: 221 PFRLYRCHTIMNCTQSCP 238 + C NC CP Sbjct: 741 EVSVLDCTGCSNCADVCP 758 >gi|271499269|ref|YP_003332294.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya dadantii Ech586] gi|270342824|gb|ACZ75589.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya dadantii Ech586] Length = 1177 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 3/91 (3%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-E 209 + ++ + + C C C +CP + PA + + S D + Sbjct: 670 TQWEKRNIAEAIPLWKPELCTQCNHCVAACP--HSAIRAKVVPAEAMADAPASLQSLDVK 727 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R C C + CP Sbjct: 728 ARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|302345315|ref|YP_003813668.1| pyruvate synthase [Prevotella melaninogenica ATCC 25845] gi|302149161|gb|ADK95423.1| pyruvate synthase [Prevotella melaninogenica ATCC 25845] Length = 1191 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 6/78 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-- 220 C+ C CS CP + + ++ D ++L ++ Sbjct: 685 PKWDAENCIQCNKCSYVCPHACIRP----FVLDEAEKANFNEETLDVIAPKQLKGMQFRI 740 Query: 221 PFRLYRCHTIMNCTQSCP 238 + C NC CP Sbjct: 741 EVSVLDCTGCSNCADVCP 758 >gi|116749582|ref|YP_846269.1| molybdopterin oxidoreductase [Syntrophobacter fumaroxidans MPOB] gi|116698646|gb|ABK17834.1| molybdopterin oxidoreductase [Syntrophobacter fumaroxidans MPOB] Length = 880 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 20/96 (20%), Gaps = 14/96 (14%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 SP+ R CV C C C +R Sbjct: 120 PYSPEEFGRHRAEQAGRYFERDYDLCVRCGRCVRVCHEVR---------GAKAIVFR-EK 169 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R E L + C C CP G Sbjct: 170 HGRQEVGTPFDRPLAET----GCQFCGACVDVCPVG 201 >gi|146302538|ref|YP_001197129.1| D-lactate dehydrogenase (cytochrome) [Flavobacterium johnsoniae UW101] gi|146156956|gb|ABQ07810.1| D-lactate dehydrogenase (cytochrome) [Flavobacterium johnsoniae UW101] Length = 971 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 13/137 (9%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P+ + +V+ S R + K + + + +C C Sbjct: 516 PNTILNVGKIVNASKMDENLR----FEAGRVEPDIKTIQDFSDSLGILRAAEKCNGSGDC 571 Query: 177 S-------TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 T CPSY + A R + + ++ L F L C + Sbjct: 572 RKLPSAGGTLCPSYRATRNEKDTTRARANALREYLTNSEKENKFDHQELYKVFEL--CVS 629 Query: 230 IMNCTQSCPKGLNPAKA 246 C CP ++ A Sbjct: 630 CKACASECPSNVDVATL 646 >gi|62262897|gb|AAX78111.1| unknown protein [synthetic construct] Length = 197 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L V HF+++ +++ + H R+ +G C+ C C Sbjct: 41 ELLKGLKVTGKHFFTRKVTVQY--PDEKTPISNRFRGLHALRRYENGEERCIACKLCEVV 98 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + +D L++C C +SCP Sbjct: 99 CPALAITINSTEREDGTRRTSSYEMD------------------LFKCIFCGYCEESCPV 140 Query: 240 G 240 Sbjct: 141 D 141 >gi|297618224|ref|YP_003703383.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297146061|gb|ADI02818.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 301 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C C + + +W+ + + Sbjct: 181 FFAEMFSRCIRCYACRQICVACNCRKCIFDETRP-----QWVGREVNLADNWMYHVVRAM 235 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 RC C ++CP GL + L+ Sbjct: 236 HIAGRCVECGECERACPVGLPLM----LLNRKLIK 266 >gi|260463633|ref|ZP_05811831.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium opportunistum WSM2075] gi|259030487|gb|EEW31765.1| cytochrome c oxidase accessory protein CcoG [Mesorhizobium opportunistum WSM2075] Length = 536 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 35/162 (21%), Gaps = 12/162 (7%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D A ++ K A+ + VI FY Sbjct: 161 DRNARMKLDAGPWTARKLMLRLSKHAVWL-------VIGAATGGAWIFYFADAPTLVGEL 213 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + C+ CP Sbjct: 214 FTGTAAPVAYITIAVLTATTYTFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYN 269 Query: 205 DSRDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAK 245 D R E + ++ + C C CP G++ Sbjct: 270 DWRGEPRSRHAKKVQATGQSVGDCVDCNACVAVCPMGIDIRD 311 >gi|313126267|ref|YP_004036537.1| hypothetical protein Hbor_15190 [Halogeometricum borinquense DSM 11551] gi|312292632|gb|ADQ67092.1| uncharacterized conserved protein containing a ferredoxin-like domain [Halogeometricum borinquense DSM 11551] Length = 739 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 ++ ED Q + LY C+ C+ CS SC ++ G A + Y I + E E Sbjct: 308 MEMREDDQLRETLY-CIRCSACSNSCANFQHVG----GHAFGGETYSGGIGTGWEAGVEG 362 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 LD + L C C +CP ++ Sbjct: 363 LDTAAEFNDL--CTGCSRCVNACPVEIDI 389 >gi|292655839|ref|YP_003535736.1| 4Fe-S protein [Haloferax volcanii DS2] gi|291372063|gb|ADE04290.1| 4Fe-S protein [Haloferax volcanii DS2] Length = 733 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ++ C+ C+ CS C ++ G A + Y I + E E Sbjct: 307 RFDMREDDQLRETLYCIRCSACSNVCANFQHVG----GHAFGGETYSGGIGTGWEAGVEG 362 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 LD+ + L C CT +CP ++ Sbjct: 363 LDSAAEFNDL--CTGCSRCTTACPVEIDI 389 >gi|291277207|ref|YP_003516979.1| putative oxidoreductase ferredoxin-type electron transport protein [Helicobacter mustelae 12198] gi|290964401|emb|CBG40251.1| putative oxidoreductase ferredoxin-type electron transport protein [Helicobacter mustelae 12198] Length = 460 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 11/91 (12%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 CV CA C +C +Y + D P L+ + S Sbjct: 1 MQKIPSACVKCAKCIQACTTYQVHRDEVHSPRGFLELIEGVEISNKAGAA---------- 50 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L C +C +CP GL AI + + Sbjct: 51 -LQSCFLCAHCVSACPLGLPVDFAIMQARSR 80 >gi|253741756|gb|EES98619.1| Pyruvate-flavodoxin oxidoreductase [Giardia intestinalis ATCC 50581] Length = 1253 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 43/147 (29%), Gaps = 33/147 (22%) Query: 115 PLPHMSVIKDLVVDMSHFYSQH--RSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECV 171 P P V ++ ++ ++ + + + P +K + C+ Sbjct: 666 PEPDKYVKDIILPSVTRKFANISTKDVMKYNSGKIPGGYSKYEKLGSAAKVPTWKKENCI 725 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY------ 225 C CS CP ++ + D++ + E + L+ +L Sbjct: 726 QCGFCSVQCP------------HAAVRCFVMNEDNKPDNVPEDFEMLDMKGKLAAVNSDS 773 Query: 226 ------------RCHTIMNCTQSCPKG 240 C C ++CPK Sbjct: 774 SKIKFRVQVSPLDCRGCGVCVEACPKD 800 >gi|251790931|ref|YP_003005652.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya zeae Ech1591] gi|247539552|gb|ACT08173.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya zeae Ech1591] Length = 1177 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 3/91 (3%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-E 209 + ++ ++ + C C C +CP + PA + + S D + Sbjct: 670 TQWEKRNIAEQIPLWKPALCTQCNHCVAACP--HSAIRAKVVPAEAMADAPASLQSLDVK 727 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R C C + CP Sbjct: 728 ARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|237654244|ref|YP_002890558.1| iron-sulfur cluster binding protein [Thauera sp. MZ1T] gi|237625491|gb|ACR02181.1| iron-sulfur cluster binding protein [Thauera sp. MZ1T] Length = 469 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 21/98 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSY-----WWNSDRYLGPAILL--QAYRWLIDSRDEFQGE 213 R+ + + C+ C C C + Y GP + + L SRD Sbjct: 302 REGMKEMLRCIRCGACMNHCVVFRQLGGHVYGGTYPGPMGAVLTPVFDGLEKSRDLPHA- 360 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP + + + Sbjct: 361 -------------CTMNGKCQEVCPVAIPLPTLLRGWR 385 >gi|213027004|ref|ZP_03341451.1| fumarate reductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 74 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%) Query: 86 GSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 GSCGM ++ LAC ++D + V L + + +DLV+DM+HF + Sbjct: 1 GSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERDLVIDMTHFTKAWKR 53 >gi|110597512|ref|ZP_01385798.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110340831|gb|EAT59305.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 1218 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 10/96 (10%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGER--LDNLEDP 221 C+ C C T C Y+ + P A L D++ E + L L Sbjct: 778 YCIRCGKCKTDCCVYYPARGMFYHPRNKNLAIGSLIEALLFDAQRERTTDFDLLKWL--E 835 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C + CP ++ + + ++ +L Sbjct: 836 EIADHCTICHKCLKPCPVDIDTGEV-SVLEREILSE 870 >gi|152974336|ref|YP_001373853.1| formate dehydrogenase, alpha subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023088|gb|ABS20858.1| formate dehydrogenase, alpha subunit [Bacillus cytotoxicus NVH 391-98] Length = 980 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 59/216 (27%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D + DG ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTIDGQEFVSSDGKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVKDM-------------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C + K + L + + + + + H ++ Sbjct: 64 CSTKVEDGMHIERKSARAKTAQTEAMDRILENHLLYCTVCDNNNGNCKIHNTVHMMGIEE 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P K + E C+ C C C + N + ++ R Sbjct: 124 QKYPYKPKVSPSEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLERP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|306842348|ref|ZP_07475006.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. BO2] gi|306287528|gb|EFM58990.1| cytochrome c oxidase accessory protein CcoG [Brucella sp. BO2] Length = 516 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K +I + VI L FY Sbjct: 142 DRNARMKLDKAPWTFDKVWKRLAKHSIWI-------VIGVLTGGAWIFYFADAPTLFKDF 194 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + C+ CP + L + + Sbjct: 195 VTGHAAPVAYFTVAILTATTYIFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 252 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C +CP G++ Sbjct: 253 RGEPRSR-----HSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 292 >gi|295101854|emb|CBK99399.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Faecalibacterium prausnitzii L2-6] Length = 1174 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 23/86 (26%), Gaps = 8/86 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C+ C + A L A SRD + Sbjct: 683 PEWDAAKCVGCNQCAFVCS--HATIRPFQLTADELAAAPAQTKSRDNKPANEYKFVMAVS 740 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C C CP KAI Sbjct: 741 PL-DCMGCGECVTVCP-----TKAIQ 760 >gi|124004009|ref|ZP_01688856.1| D-lactate dehydrogenase [Microscilla marina ATCC 23134] gi|123990588|gb|EAY30068.1| D-lactate dehydrogenase [Microscilla marina ATCC 23134] Length = 984 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 37/129 (28%), Gaps = 13/129 (10%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSD 188 + + +L + + G C C T CPSY Sbjct: 538 MDTFLRYDAGQDTPAFDTVLDFSGTQGILRGAEMCNGSGDCRKTEISGGTMCPSYMATRS 597 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 R + D + R D+ E + C + C CP ++ +A Sbjct: 598 EKDTTRARANILREYLTRSD--KPNRFDHEEIKEVMDLCLSCKGCKSECPSNVD----MA 651 Query: 249 KIKMMLLDR 257 K+K L + Sbjct: 652 KMKAEFLQQ 660 >gi|121608288|ref|YP_996095.1| FAD linked oxidase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552928|gb|ABM57077.1| FAD linked oxidase domain protein [Verminephrobacter eiseniae EF01-2] Length = 1292 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 824 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 883 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 884 --ADHCTVCHKCESPCPVKIDFGAVTMNMRNLL 914 >gi|54027581|ref|YP_121823.1| putative oxidoreductase [Nocardia farcinica IFM 10152] gi|54019089|dbj|BAD60459.1| putative oxidoreductase [Nocardia farcinica IFM 10152] Length = 952 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 13/104 (12%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQ 198 A +D ++ CV C CPSY D + Sbjct: 519 PMPQAGGFAFPRDDADLSTAVHRCVGVGKCRADTRAAGGFMCPSYLATGDEKDTTRGRAR 578 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + ++ +D+ L C + C+ CP G++ Sbjct: 579 VLQEVV-----RGAVAIDSPAVAESLDLCLSCKACSADCPAGVD 617 >gi|257466640|ref|ZP_05630951.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium gonidiaformans ATCC 25563] gi|315917794|ref|ZP_07914034.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium gonidiaformans ATCC 25563] gi|313691669|gb|EFS28504.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium gonidiaformans ATCC 25563] Length = 436 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 22/98 (22%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + C+ C C + CP L P + + + ++ + L+ Sbjct: 355 EETNPYKPKACIGCGKCVSVCPMS-------LEPVMFARLAAF----------QQWEGLQ 397 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAI----AKIKMM 253 + L C +C CP +AI AK++ M Sbjct: 398 NYH-LMDCIECGSCAFICPANRPLTEAIKIGKAKLRSM 434 >gi|220903330|ref|YP_002478642.1| FAD linked oxidase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867629|gb|ACL47964.1| FAD linked oxidase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1183 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 17/145 (11%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V +DL V F + + + L + + + C C C Sbjct: 683 PAKLVYRDLPVRPFTF--------SFNRLIRDIRESGLPDKDKLIHLLTSIQVCTRCGKC 734 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPFRLYRCHT 229 C + P L++ ++ L + D + C Sbjct: 735 KQVCSMCYPERSMQYHPRNKNMVMGMLLEAVYYSQVNKGRIDDRLLKWMRDL--VEHCTA 792 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 C +CP + + ++ +L Sbjct: 793 CGRCMANCPVKIPSGEVALTLRALL 817 >gi|78189900|ref|YP_380238.1| DsrK protein [Chlorobium chlorochromatii CaD3] gi|78172099|gb|ABB29195.1| putative sulfite reductase-associated electron transfer protein DsrK [Chlorobium chlorochromatii CaD3] Length = 549 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 51/178 (28%), Gaps = 18/178 (10%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDL-VVDMSHFYSQHRSIEPWLKTVSPK 149 N G + +D + P V+++L + + + + Sbjct: 26 NYSGKEWWDLPVEFRDGNWSFPAKPE----VLEELHFPNPRKWMATDADWQLPAGWEKTI 81 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + R + CV C C+ C + D P + + R + + Sbjct: 82 KEGLRDRLKRFRSFKLFMDACVRCGACADKCHFFLGTGDPKNMPVVRAELLRSVYRNDFP 141 Query: 210 FQGERLDNLEDPFRL-------YR-----CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + +L + C C+ CP G++ A+ I + LL Sbjct: 142 LAEKIFKGFAGSRKLTPEVIKEWHMYFNQCTECRRCSVFCPMGIDTAE-ITIMGRELL 198 >gi|189346237|ref|YP_001942766.1| DsrK protein [Chlorobium limicola DSM 245] gi|189340384|gb|ACD89787.1| DsrK protein [Chlorobium limicola DSM 245] Length = 549 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 12/121 (9%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + + R L CV C C+ C + D P + + R + Sbjct: 77 QKTLMDGMRERIKKYRSLKLYLDSCVRCGACADKCHFFLGTGDPKNMPVLRAELVRSVYR 136 Query: 206 SRDEFQGERLDNLEDP------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L Y+C C+ CP G++ A+ ++ + Sbjct: 137 GDFPMVEKILKGFAGSRKLTKEVLKEWFMYFYQCTECRRCSVFCPMGIDTAEITIMVREI 196 Query: 254 L 254 L Sbjct: 197 L 197 >gi|326955339|gb|AEA29032.1| D-lactate dehydrogenase (cytochrome) [Pseudonocardia dioxanivorans CB1190] Length = 975 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C T+ CPSY + + + + E + + E Sbjct: 549 RRCLGVGKCITASGGVMCPSYRATGEEMHSTRGRARLLFEMANG--ELISDGWQSPEVAE 606 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 L C + C + CP G++ Sbjct: 607 ALDLCLSCKGCKRDCPVGVD 626 >gi|323529097|ref|YP_004231249.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] gi|323386099|gb|ADX58189.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] Length = 1006 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G D+++D Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLAISGQLGEAGLASDDVKDT- 654 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + + R Sbjct: 655 -LDLCVSCKGCKRDCPTGVDMAKFKIEARAARVKR 688 >gi|170690952|ref|ZP_02882118.1| D-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] gi|170144201|gb|EDT12363.1| D-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] Length = 1006 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G D+++D Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLAISGQLGEAGLASDDVKDT- 654 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + + R Sbjct: 655 -LDLCVSCKGCKRDCPTGVDMAKFKIEARAARVKR 688 >gi|319901162|ref|YP_004160890.1| NADH dehydrogenase I, chain I [Bacteroides helcogenes P 36-108] gi|319416193|gb|ADV43304.1| NADH dehydrogenase I, chain I [Bacteroides helcogenes P 36-108] Length = 176 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F Q + + + K + + + + CV C C +CP+ Sbjct: 21 MKTSMTVFLRQKTTEQYPENRATLKLSPRFRGTLIMPHNDNNEHRCVACGLCQMACPN-- 78 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ +++ D + + L+ + L C C +CP Sbjct: 79 ----------DTIRVTSHTVETEDGKKKKVLEKY--EYDLGSCMFCQLCVNACP 120 >gi|313159410|gb|EFR58773.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 593 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 14/111 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 +S++ I + + + + E + C C C C + Sbjct: 238 FSRYMHIFTEIPLIFLRHYELRSTEKEGAFDHFQVEACSRCGICIDPCQLQSVLGINDVQ 297 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 L+ R+ + RL + C C + CP ++ Sbjct: 298 SVYFLRDRRYRM--------LRLATAD------NCLMCGRCAEKCPVDIDL 334 >gi|222148752|ref|YP_002549709.1| cytochrome c oxidase accessory protein CcoG [Agrobacterium vitis S4] gi|221735738|gb|ACM36701.1| cytochrome c oxidase accessory protein CcoG [Agrobacterium vitis S4] Length = 528 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 19/79 (24%), Gaps = 3/79 (3%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C CP ++++ W + R + Sbjct: 222 YVFGGLMREQVCIYMCPWPRIQGAMLDEKSLVVTYNDWRGEPR---TRHAKKVAAAGETV 278 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 279 GDCVDCNACVVVCPMGIDI 297 >gi|197118354|ref|YP_002138781.1| hypothetical protein Gbem_1971 [Geobacter bemidjiensis Bem] gi|197087714|gb|ACH38985.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 325 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 26/148 (17%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS- 182 DL+V+ P + + P L+ + CV C CS CP+ Sbjct: 175 DLLVETEKELE-----PPPCGSCNVLPQDPQLRFSDHPLWEKFAETCVSCGACSVCCPTC 229 Query: 183 YWWNSDRYLGPAILLQAYR------WLIDSRDEF---QGERLDNLEDPF----------- 222 Y ++ Y + + R ++ + RL+ L F Sbjct: 230 YCFDLREYPSLSGGGERVREWDNCLFVTHGEVAGGNFRATRLERLRYRFLHKYCGFTPLT 289 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C + CP G++ + + Sbjct: 290 GITSCVGCGRCKEFCPVGIDLRELFQDL 317 >gi|89893059|ref|YP_516546.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 [Desulfitobacterium hafniense Y51] gi|89332507|dbj|BAE82102.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 [Desulfitobacterium hafniense Y51] Length = 542 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C Y + D P + + R + R Sbjct: 87 RSFKIMMDICVRCGACADKCHFYIGSGDPKNMPVLRAELLRSVYRRYFTPSGKFLGRLAG 146 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + + Y+C C+ CP G++ A+ I I LL Sbjct: 147 ARDLTPEVIKEWWYYFYQCTECRRCSVFCPYGIDQAE-ITIIGRELL 192 >gi|18310391|ref|NP_562325.1| hypothetical protein CPE1409 [Clostridium perfringens str. 13] gi|18145071|dbj|BAB81115.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 436 Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKFDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|317401300|gb|EFV81940.1| FAD/iron-sulfur cluster-binding domain-containing protein [Achromobacter xylosoxidans C54] Length = 1320 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + + ED Sbjct: 854 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLKHWEEFEDV 913 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 914 --ADHCTVCHKCYNPCPVDIDFGDVSMSMRAVL 944 >gi|269977608|ref|ZP_06184575.1| NADH-quinone oxidoreductase subunits h/i [Mobiluncus mulieris 28-1] gi|269934211|gb|EEZ90778.1| NADH-quinone oxidoreductase subunits h/i [Mobiluncus mulieris 28-1] Length = 291 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + H+ + DGL +C+ C C+ +CP+ Sbjct: 61 FGVTFRNFFRPY--VTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADA 118 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + GER + L RC CT++CP Sbjct: 119 IYVEAASNTPEAQH-----------SPGERYGRVYQINYL-RCIFCGMCTEACP 160 >gi|227874592|ref|ZP_03992755.1| NADH dehydrogenase subunit I [Mobiluncus mulieris ATCC 35243] gi|227844801|gb|EEJ54947.1| NADH dehydrogenase subunit I [Mobiluncus mulieris ATCC 35243] Length = 291 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + H+ + DGL +C+ C C+ +CP+ Sbjct: 61 FGVTFRNFFRPY--VTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADA 118 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + GER + L RC CT++CP Sbjct: 119 IYVEAASNTPEAQH-----------SPGERYGRVYQINYL-RCIFCGMCTEACP 160 >gi|254468778|ref|ZP_05082184.1| NADH-quinone oxidoreductase chain i [beta proteobacterium KB13] gi|207087588|gb|EDZ64871.1| NADH-quinone oxidoreductase chain i [beta proteobacterium KB13] Length = 163 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 25/136 (18%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++K + + +S+F+++ +I+ + H R+ +G C+ C Sbjct: 12 LSLYELLKGMKLTLSYFFAKKVTIQY--PEQKTPQSPRFRGLHALRRYPNGEERCIACKL 69 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + L + R+ ID L +C C + Sbjct: 70 CEAVCPAMAITIESELREDNSRRTTRYDID------------------LTKCIFCGFCEE 111 Query: 236 SCPKGLNPAKAIAKIK 251 SCP +I + + Sbjct: 112 SCPV-----DSIVETR 122 >gi|89056344|ref|YP_511795.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88865893|gb|ABD56770.1| iron-sulfur-binding protein RdxA/RdxB/FixG family [Jannaschia sp. CCS1] Length = 506 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 25/104 (24%), Gaps = 25/104 (24%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL---DNLEDP-- 221 C +CP + +I + W + R + + R+ + D Sbjct: 205 FGGFAREQICIYACPWPRIQAAMMDEHSITVAYRDWRGEPRGKGKNRRVVAEKAIADSRL 264 Query: 222 --------------------FRLYRCHTIMNCTQSCPKGLNPAK 245 L C C CP G++ Sbjct: 265 AGSLVTGQEPGSTTTASPDIQVLGDCIDCNACVNVCPMGIDIRD 308 >gi|307701294|ref|ZP_07638315.1| NADH-quinone oxidoreductase, chain I [Mobiluncus mulieris FB024-16] gi|307613455|gb|EFN92703.1| NADH-quinone oxidoreductase, chain I [Mobiluncus mulieris FB024-16] Length = 291 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + H+ + DGL +C+ C C+ +CP+ Sbjct: 61 FGVTFRNFFRPY--VTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADA 118 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + GER + L RC CT++CP Sbjct: 119 IYVEAASNTPEAQH-----------SPGERYGRVYQINYL-RCIFCGMCTEACP 160 >gi|289767008|ref|ZP_06526386.1| oxidoreductase [Streptomyces lividans TK24] gi|289697207|gb|EFD64636.1| oxidoreductase [Streptomyces lividans TK24] Length = 992 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPF 222 C+ C C +CPS+ D P + R L E+L Sbjct: 567 EPVADPCIECGFCEPTCPSH----DLTTTPRQRIVLRREMLRQPDGSPVEEQLLASYGYD 622 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP G++ + + Sbjct: 623 AVDTCAGDSTCAIACPVGIDTGAMMKDFRHR 653 >gi|256783126|ref|ZP_05521557.1| oxidoreductase [Streptomyces lividans TK24] Length = 998 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPF 222 C+ C C +CPS+ D P + R L E+L Sbjct: 573 EPVADPCIECGFCEPTCPSH----DLTTTPRQRIVLRREMLRQPDGSPVEEQLLASYGYD 628 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP G++ + + Sbjct: 629 AVDTCAGDSTCAIACPVGIDTGAMMKDFRHR 659 >gi|194289959|ref|YP_002005866.1| iron-sulfur 4fe-4S ferredoxin transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|193223794|emb|CAQ69801.1| IRON-SULFUR 4FE-4S FERREDOXIN TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 490 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 29/104 (27%), Gaps = 8/104 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P A +L G + C CP Y + + Y Sbjct: 203 GPWQAFWMLFY---AFATWGNAGFMREQVCKYMCP-YARFQSVMVDRDTYVVTYDV---G 255 Query: 207 RDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 R E +G R + L C C Q CP G++ + Sbjct: 256 RGEPRGSRSRKTDHHQAGLGDCVNCSICVQVCPTGIDIRDGLQY 299 >gi|71281638|ref|YP_268922.1| electron transport complex protein RnfC [Colwellia psychrerythraea 34H] gi|71147378|gb|AAZ27851.1| electron transport complex, RnfABCDGE type, C subunit [Colwellia psychrerythraea 34H] Length = 788 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 22/89 (24%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 EC+ C CS CPS + L + + Y L+ L L C Sbjct: 383 ECIRCGQCSDVCPSQLLPQE--LQWSAKAKDYSQ------------LEKLN----LRDCI 424 Query: 229 TIMNCTQSCPKGLNPAK----AIAKIKMM 253 C CP + A A+I+ Sbjct: 425 DCGACAYVCPSQIPLVHYYRIAKAEIREQ 453 >gi|21225836|ref|NP_631615.1| oxidoreductase [Streptomyces coelicolor A3(2)] gi|11228469|emb|CAC16452.1| putative oxidoreductase [Streptomyces coelicolor A3(2)] Length = 998 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPF 222 C+ C C +CPS+ D P + R L E+L Sbjct: 567 EPVADPCIECGFCEPTCPSH----DLTTTPRQRIVLRREMLRQPDGSPVEEQLLASYGYD 622 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP G++ + + Sbjct: 623 AVDTCAGDSTCAIACPVGIDTGAMMKDFRHR 653 >gi|296169123|ref|ZP_06850782.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896243|gb|EFG75905.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 968 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 35/117 (29%), Gaps = 7/117 (5%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWW 185 H Y ++ + +PA H+D + CV C CPSY Sbjct: 520 HPYRLDENLRKGVDFRPAEPATVFAYPHDDHRFSRAADRCVGIGKCRGEESGVMCPSYRA 579 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + +++ G R + D L C C CP ++ Sbjct: 580 TQEEEHSTRGRARLLFEMVEGDVITDGWRSTEVHDA--LDLCLACKGCRSDCPVNVD 634 >gi|241763110|ref|ZP_04761170.1| cytochrome c oxidase accessory protein CcoG [Acidovorax delafieldii 2AN] gi|241367735|gb|EER61989.1| cytochrome c oxidase accessory protein CcoG [Acidovorax delafieldii 2AN] Length = 482 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 7/78 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP Y L+ +Y D R E +G R ++ L Sbjct: 220 AGFMREQVCKYMCP-YARFQSAMFDRDTLIVSY----DPERGEPRGPRTKAVDYKAKGLG 274 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 275 DCIDCTLCVQVCPVGIDI 292 >gi|78357315|ref|YP_388764.1| reductase, iron-sulfur binding subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219720|gb|ABB39069.1| putative sulfite reductase-associated electron transfer protein DsrK [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 536 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 13/118 (11%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + + R + CV C C+ C + D P + + R + Sbjct: 72 YNAMQERLEKYRSFKVFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRRDFT 131 Query: 210 FQGERLDNLEDPFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 G+ L L +L Y+C C+ CP G++ A+ I + LL Sbjct: 132 TAGKILGKLAGARKLDKDVIKEWFYYFYQCTECRRCSVYCPYGIDTAE-ITMMARELL 188 >gi|15616735|ref|NP_239947.1| membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682046|ref|YP_002468430.1| membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|17368120|sp|P57215|RNFC_BUCAI RecName: Full=Electron transport complex protein rnfC gi|25403549|pir||A84943 membrane protein [imported] - Buchnera sp. (strain APS) gi|10038798|dbj|BAB12833.1| membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621779|gb|ACL29935.1| membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085858|gb|ADP65940.1| membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087011|gb|ADP67091.1| membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087582|gb|ADP67661.1| membrane protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 473 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 18/118 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ K + +++ + C+ C CS CP Sbjct: 304 KKINNLNHSILKKTNSIFITHKKEKNESISEKTCIRCGYCSYVCPVNLLPQ--------- 354 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q Y ++ + + + C C + CP + K + K +L Sbjct: 355 -QLYWYIKNKNHVQTKKHY--------VLDCIECKACEKVCPSYIPLVKYFIQEKNIL 403 >gi|219666326|ref|YP_002456761.1| 4Fe-4S ferredoxin iron-sulfur binding [Desulfitobacterium hafniense DCB-2] gi|219536586|gb|ACL18325.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfitobacterium hafniense DCB-2] Length = 542 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C Y + D P + + R + R Sbjct: 87 RSFKIMMDICVRCGACADKCHFYIGSGDPKNMPVLRAELLRSVYRRYFTPSGKFLGRLAG 146 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + + Y+C C+ CP G++ A+ I I LL Sbjct: 147 ARDLTPEVIKEWWYYFYQCTECRRCSVFCPYGIDQAE-ITIIGRELL 192 >gi|312880739|ref|ZP_07740539.1| electron transport complex, RnfABCDGE type, C subunit [Aminomonas paucivorans DSM 12260] gi|310784030|gb|EFQ24428.1| electron transport complex, RnfABCDGE type, C subunit [Aminomonas paucivorans DSM 12260] Length = 443 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 26/104 (25%), Gaps = 18/104 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E C+ C C CP L + + R Sbjct: 353 LAFTEGAAMTPPESACIRCGKCVEVCP------------------MGLLPFALNAAVIRR 394 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + C C +CP + +A K + R+ Sbjct: 395 DYDAFEAQGGMNCLECGCCAYACPSKRHLTQACRDGKRTVAARR 438 >gi|110668459|ref|YP_658270.1| oxidoreductase ( glycolate oxidase iron-sulfur subunit) [Haloquadratum walsbyi DSM 16790] gi|109626206|emb|CAJ52662.1| probable oxidoreductase (probable glycolate oxidase iron-sulfur subunit) [Haloquadratum walsbyi DSM 16790] Length = 1036 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 15/109 (13%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLI-D 205 + + C C C CP+Y + R + Sbjct: 609 MNWEVENGFEGMAELCHGCGGCRGPQETTGGVMCPTYRAAEEEIQSTRGRANMLRQAMSG 668 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 S DE E ++ L C C + CP G++ +AK+K + Sbjct: 669 SLDE--NELFEDEFVEEVLDLCIGCKGCAKDCPSGVD----MAKMKAEI 711 >gi|51245927|ref|YP_065811.1| D-lactate dehydrogenase [Desulfotalea psychrophila LSv54] gi|50876964|emb|CAG36804.1| probable D-lactate dehydrogenase [Desulfotalea psychrophila LSv54] Length = 943 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 7/131 (5%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 +L+ ++ + + P + L Q + +C+ C C +C S Sbjct: 497 ELMCEIKRLFDPDTILNPGVIINDDP-ECYLKNFKPLPQCDPLIDKCIECGFCEVNCMSN 555 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY---RCHTIMNCTQSCPKG 240 ++ + + R + ERL LE F C C SCP Sbjct: 556 HFSLSARQRIVVQREIARL---KKSGENPERLAELEKGFVFQGEESCAGDGLCETSCPVS 612 Query: 241 LNPAKAIAKIK 251 ++ K I +I+ Sbjct: 613 IDTGKYIKQIR 623 >gi|325662019|ref|ZP_08150638.1| hypothetical protein HMPREF0490_01376 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471682|gb|EGC74901.1| hypothetical protein HMPREF0490_01376 [Lachnospiraceae bacterium 4_1_37FAA] Length = 373 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 9/139 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP++ VI + M E + + +++ D K C CA Sbjct: 241 LPNVKVILSGMSTMGQVEDNLSIFETFEPLSEKEQKL--IENTADTLKSRVKNGCTGCAY 298 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + QA E ++ +++ + C C + Sbjct: 299 CMP-CPAGVDIPGNFRIW--NDQAVYQNT----EQTKKKWSGMDEKAKADHCIRCGKCEK 351 Query: 236 SCPKGLNPAKAIAKIKMML 254 CP+ ++ + + ++ L Sbjct: 352 VCPQKISIRENLHQVAEEL 370 >gi|323219137|gb|EGA03637.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 414 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 206 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRALNFH---QA 260 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 261 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 300 >gi|322613681|gb|EFY10621.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620252|gb|EFY17121.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623298|gb|EFY20139.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630503|gb|EFY27272.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632820|gb|EFY29565.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638847|gb|EFY35541.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640332|gb|EFY36991.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647162|gb|EFY43661.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648988|gb|EFY45431.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653895|gb|EFY50219.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661002|gb|EFY57231.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663057|gb|EFY59264.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668502|gb|EFY64657.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673362|gb|EFY69465.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679149|gb|EFY75203.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683243|gb|EFY79258.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685887|gb|EFY81877.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195173|gb|EFZ80354.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198741|gb|EFZ83841.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202385|gb|EFZ87428.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209230|gb|EFZ94166.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209787|gb|EFZ94710.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216113|gb|EGA00843.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223718|gb|EGA08025.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231324|gb|EGA15438.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232584|gb|EGA16681.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240973|gb|EGA25013.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245608|gb|EGA29603.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247638|gb|EGA31587.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251080|gb|EGA34954.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254849|gb|EGA38644.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263372|gb|EGA46906.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266309|gb|EGA49798.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271453|gb|EGA54875.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 451 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRALNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|259417230|ref|ZP_05741149.1| cytochrome c oxidase accessory protein CcoG [Silicibacter sp. TrichCH4B] gi|259346136|gb|EEW57950.1| cytochrome c oxidase accessory protein CcoG [Silicibacter sp. TrichCH4B] Length = 476 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 5/68 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + + W + R + + D + C M C Sbjct: 215 CIYACPWPRIQAAMMDEDTLTVGYRDWRGEPRGKHRKS-----ADADQKGDCIDCMACVN 269 Query: 236 SCPKGLNP 243 CP G++ Sbjct: 270 VCPMGIDI 277 >gi|168206315|ref|ZP_02632320.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens E str. JGS1987] gi|170662230|gb|EDT14913.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens E str. JGS1987] Length = 436 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKFDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|168238788|ref|ZP_02663846.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737944|ref|YP_002115086.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713446|gb|ACF92667.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288433|gb|EDY27814.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 451 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRALNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|74317278|ref|YP_315018.1| hypothetical protein Tbd_1260 [Thiobacillus denitrificans ATCC 25259] gi|74056773|gb|AAZ97213.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 373 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 22/118 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPS-------------------YWWNSDRYLGPAI 195 + + + D C+ C C+ CP+ + Sbjct: 249 MSRLDHPRWDDVAARCLACTNCTLVCPTCFCHAEVDEVAVDGDTTEHARVWDSCFGEAHG 308 Query: 196 LLQAYRWLIDSRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L + D R ++ +LD D F C C CP G++ + A + Sbjct: 309 HLHGFNVRPDVRTRYRQWLTHKLDTWHDQFGRSGCVGCGRCIAWCPAGIDLTEEFAAL 366 >gi|239904829|ref|YP_002951567.1| heterodisulfide reductase subunit C [Desulfovibrio magneticus RS-1] gi|239794692|dbj|BAH73681.1| heterodisulfide reductase subunit C [Desulfovibrio magneticus RS-1] Length = 186 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 13/103 (12%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 + + + C C C+ CP + Y P Q R + + Sbjct: 16 HRVEEESGQNVSLCYQCGNCTAGCP----YTFAYDIPVS--QIMRLVQAGQ-------KK 62 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + ++ C T +CT CP ++ A + ++ M + Sbjct: 63 TVLSSKSIWLCATCESCTTRCPNMIDVACVMDVLRHMARREGL 105 >gi|121608149|ref|YP_995956.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121552789|gb|ABM56938.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 496 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 24/77 (31%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYR 226 + C CP Y L+ Y R E +G R L+ L Sbjct: 231 AGFMREQVCKYMCP-YARFQSAMFDKDTLIVGYDI---GRGEPRGPRSKRLDHQARGLGD 286 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 287 CIDCTLCVQVCPVGIDI 303 >gi|91773357|ref|YP_566049.1| electron transport complex, RnfABCDGE type, C subunit [Methanococcoides burtonii DSM 6242] gi|91712372|gb|ABE52299.1| Transport complex rnfC-like protein [Methanococcoides burtonii DSM 6242] Length = 453 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 20/97 (20%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDN 217 D D +C CA C CP I + + R DE + Sbjct: 350 ADEVIRDVSIDCTHCARCVDVCPVD----------LIPSRITAFADQGRFDECRQ----- 394 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C C+ CP ++ + I K + Sbjct: 395 ----MNILNCVECGRCSAVCPSKIHLLQLIRYAKNSI 427 >gi|78358643|ref|YP_390092.1| oxidoreductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221048|gb|ABB40397.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 943 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 25/88 (28%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C CPS + R + + L + Sbjct: 536 HSIVDKCIECGFCEPICPSRDVTFTPRQRIVSWREVCRMENEEEKNKLLKTLLKGYNYLG 595 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C CP G+N I ++ Sbjct: 596 EDTCAADGLCATRCPVGINTGSFIKHLR 623 >gi|16125654|ref|NP_420218.1| ferredoxin [Caulobacter crescentus CB15] gi|221234408|ref|YP_002516844.1| polyferredoxin protein fixG [Caulobacter crescentus NA1000] gi|13422764|gb|AAK23386.1| ferredoxin, putative [Caulobacter crescentus CB15] gi|220963580|gb|ACL94936.1| polyferredoxin protein fixG [Caulobacter crescentus NA1000] Length = 496 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ CP ++ + R + R + + Sbjct: 226 YIFAGWMREQVCTYMCPWPRIQGAMLDQHSLQVTYLRERGEPRGAHKKG-----QSWEGR 280 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 281 GDCIDCRQCVVVCPMGIDIRD 301 >gi|320178009|gb|EFW52991.1| Pyruvate-flavodoxin oxidoreductase [Shigella boydii ATCC 9905] Length = 1174 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P + A + + SRD Sbjct: 672 WEKRNIAEEIPIWKEELCTQCNHCVAACP-HSTIRAKVVPPEAMENAPASLHSLDVKSRD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM--LLDRKI 259 + + + C C + CP KAI + + + + KI Sbjct: 731 MRGQKYVLQVAPED----CIGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKI 782 >gi|308070037|ref|YP_003871642.1| formate dehydrogenase subunit alpha [Paenibacillus polymyxa E681] gi|305859316|gb|ADM71104.1| Formate dehydrogenase alpha chain [Paenibacillus polymyxa E681] Length = 980 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 41/161 (25%), Gaps = 19/161 (11%) Query: 83 GICGSCGMNI-DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + SC DG N K + L + + + + + + H + E Sbjct: 59 KLMRSCSTLASDGMNIHLHSDRAKAAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEL 118 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILL 197 P + + E C+ C C C + N L Sbjct: 119 MEIEHQKYPYQPKVDPTEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAER 178 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D R + D C + C CP Sbjct: 179 P--RVIWDDRV--------AINDS----SCVSCGQCVTVCP 205 >gi|78044809|ref|YP_359568.1| putative heterodisulfide reductase, B/C subunits [Carboxydothermus hydrogenoformans Z-2901] gi|77996924|gb|ABB15823.1| putative heterodisulfide reductase, B/C subunits [Carboxydothermus hydrogenoformans Z-2901] Length = 431 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 22/165 (13%) Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFY 133 LR C +C M D L + + L ++ L ++ Sbjct: 221 TNLRADALTVTCPACFMQFDQKQALYARQGDILNLPVLTYMELLALA----LGIEAEELN 276 Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + ++P E L +E+ L C+ C C CPS G Sbjct: 277 LKEHRVDPSPVLRKAGIINEPLPFNEEV-----LKRCLTCGACEYDCPSARTGVMSPQG- 330 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R+L ++ L + ++ C C + CP Sbjct: 331 ----IIKRFLN--------GEIEELINSSEIWECVECHTCLEYCP 363 >gi|254167911|ref|ZP_04874760.1| hypothetical protein ABOONEI_1553 [Aciduliprofundum boonei T469] gi|289596650|ref|YP_003483346.1| heterodisulfide reductase subunit C-like protein [Aciduliprofundum boonei T469] gi|197623202|gb|EDY35768.1| hypothetical protein ABOONEI_1553 [Aciduliprofundum boonei T469] gi|289534437|gb|ADD08784.1| heterodisulfide reductase subunit C-like protein [Aciduliprofundum boonei T469] Length = 133 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 13/116 (11%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 T+ P K L + ++ C C CS+ CP + + Q + Sbjct: 1 MKYTIKEDPHKNELVQKVMEISGENIFSCYQCGRCSSGCPMAEFMD------VLPNQVFM 54 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +L + +D L + + C CT CP GL+ A + I+ + L + Sbjct: 55 FLQEG-------DVDTLLNAKTPWICAACFTCTVRCPVGLDLAAVMEAIRELQLRK 103 >gi|89902038|ref|YP_524509.1| formate dehydrogenase subunit alpha [Rhodoferax ferrireducens T118] gi|89346775|gb|ABD70978.1| formate dehydrogenase, alpha subunit [Rhodoferax ferrireducens T118] Length = 942 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 14/78 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A+R Q + + +L D Sbjct: 162 MAVNLDACIQCTRCVRACREVQVND-------VIGYAHR-------GAQSQIVFDLNDAM 207 Query: 223 RLYRCHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 208 GDSSCVACGECVQACPTG 225 >gi|150016726|ref|YP_001308980.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149903191|gb|ABR34024.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 1171 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 31/98 (31%), Gaps = 29/98 (29%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--- 219 C+ C CS CP ++A+ D + E E L L+ Sbjct: 684 PEWIPENCIQCTQCSYICP------------HATIRAFLLNEDEK-EKAPESLKVLDSKG 730 Query: 220 --DPFRLY--------RCHTIMNCTQSCPKGLNPAKAI 247 +LY C NC Q CP P KA+ Sbjct: 731 IKGDEKLYFSIGVTPLDCTGCGNCAQVCPA---PGKAL 765 >gi|171463971|ref|YP_001798084.1| cytochrome c oxidase accessory protein CcoG [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193509|gb|ACB44470.1| cytochrome c oxidase accessory protein CcoG [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 485 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 15/92 (16%) Query: 165 DGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 G + C CP S + D +L + R E +G R + + Sbjct: 210 WGNAGFMREQVCKYMCPYARFQSVMVDKDTFLVTYDKV---------RGEPRGSRSKSAD 260 Query: 220 -DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 261 HTSLGLGDCVDCSICVQVCPTGIDIRDGLQYM 292 >gi|160900896|ref|YP_001566478.1| FAD linked oxidase domain-containing protein [Delftia acidovorans SPH-1] gi|160366480|gb|ABX38093.1| FAD linked oxidase domain protein [Delftia acidovorans SPH-1] Length = 1304 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R ED Sbjct: 834 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSLRHWQEFEDV 893 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 894 S--DHCTVCHKCFNPCPVKIDFGDVTMNMRNLL 924 >gi|74318496|ref|YP_316236.1| reductase, iron-sulfur binding subunit [Thiobacillus denitrificans ATCC 25259] gi|74057991|gb|AAZ98431.1| reductase, iron-sulfur binding subunit, putative [Thiobacillus denitrificans ATCC 25259] Length = 507 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 34/106 (32%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LIDSRDE 209 R L CV C C+ C Y SD P R L Sbjct: 67 RSLKVFLDACVHCGACTDKCHYYLGTSDPKNMPVARQDLMRQVYRRYFTTPGKLFPKLVG 126 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + L+D + Y C C+ CP G++ A+ + +L Sbjct: 127 AKDLTKETLDDWYSYYHQCSECRRCSVFCPYGIDTAEITMAGREIL 172 >gi|317491980|ref|ZP_07950413.1| ferredoxin oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920005|gb|EFV41331.1| ferredoxin oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1177 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRW 202 + ++ + I C C C +CP + + + P + A + Sbjct: 666 PTGTTRWEKRNIAEEIPIWEAPLCTQCNHCVAACP-HSAIRAKVVMPEAMEHAPDSLHSL 724 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMML 254 + +RD + + + C C + CP KAI +K L Sbjct: 725 DVKARDMRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAIN-MKSRL 774 >gi|315651309|ref|ZP_07904337.1| Na(+)-translocating NADH-quinone reductase subunit A [Eubacterium saburreum DSM 3986] gi|315486461|gb|EFU76815.1| Na(+)-translocating NADH-quinone reductase subunit A [Eubacterium saburreum DSM 3986] Length = 448 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 18/91 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + C+ C C +CPS +L P ++++ L D D E+L+ +E Sbjct: 358 DEVEDNPETPCIKCGRCIDACPS-------FLVPVLMMEKA--LAD--DTQGFEKLNGME 406 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 C +C CP + + Sbjct: 407 -------CVECGSCAYVCPAKRPLTQGFKYM 430 >gi|255502232|gb|ACU11597.1| HfsD [Thermoanaerobacterium saccharolyticum] Length = 495 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 19/100 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C +CP + + L P I + + + E L + + Sbjct: 122 NIDYDKCIECGRCKDACPYNAISDN--LRPCIRSCSAKAI------TMDEELKAAINYEK 173 Query: 224 LYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 C + CT +CP G ++ +AI K + Sbjct: 174 ---CTSCGACTLACPFGAITDKSYIVDIIRAIKSGKKVYA 210 >gi|256821763|ref|YP_003145726.1| cytochrome c oxidase accessory protein CcoG [Kangiella koreensis DSM 16069] gi|256795302|gb|ACV25958.1| cytochrome c oxidase accessory protein CcoG [Kangiella koreensis DSM 16069] Length = 469 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 8/89 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-- 222 G + C CP Y L+ AY + R E +G R ++ Sbjct: 204 WGNAGMLREQVCIYMCP-YARFQSSMFDKDTLIIAY---DEERGEDRGPRKKDMPKEEYE 259 Query: 223 --RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C + C CP G++ + Sbjct: 260 AKGLGDCIDCLQCVHVCPTGIDIRDGLQY 288 >gi|229829143|ref|ZP_04455212.1| hypothetical protein GCWU000342_01228 [Shuttleworthia satelles DSM 14600] gi|229792306|gb|EEP28420.1| hypothetical protein GCWU000342_01228 [Shuttleworthia satelles DSM 14600] Length = 454 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 18/121 (14%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 S K LL + C+ C C +CP L P Sbjct: 336 MMGFAMYDTHVASTKTTSALLAMTAETCVSYEASACINCGRCVEACP-------ENLIPC 388 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L D D Q E + C +C+ CP + A+++ +K + Sbjct: 389 -------RLADYNDRGQKELFEQWHGLE----CIECGSCSFVCPARRHTAQSVRLMKKQV 437 Query: 255 L 255 + Sbjct: 438 M 438 >gi|51093222|gb|AAT94936.1| putative oxygenase gene [Rhodococcus sp. P400] Length = 949 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 H+D ++ C C CPSY + + + +I+ Sbjct: 528 HHDDGDFTQAVHRCTGVGKCRADNTATGGVMCPSYQATREEKDSTRGRARVLQEMINGTA 587 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C+ CP G++ Sbjct: 588 VDGGWRSPEVHDA--LDLCLSCKGCSSDCPTGVD 619 >gi|14591101|ref|NP_143176.1| cytochrome-c3 hydrogenase alpha chain [Pyrococcus horikoshii OT3] gi|3257710|dbj|BAA30393.1| 372aa long hypothetical cytochrome-c3 hydrogenase alpha chain [Pyrococcus horikoshii OT3] Length = 372 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 23/145 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V + + F + + + + L+ E + +C+ C C+ + Sbjct: 189 EVTDEDICAFREFEKKRQEAFKYHEDWDNLRYLLELEM-EHPMWEEEANKCLACGICTLT 247 Query: 180 CPS--------------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--DN 217 CP+ W+S ++ ++ + + +D F+ L + Sbjct: 248 CPTCRCYEVQDIVNLDGITGYRERRWDSCQFRSHGLVAGGHNFRPTKKDRFRNRYLCKNA 307 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLN 242 + L C CT CP G++ Sbjct: 308 YNEKLGLSYCVGCGRCTAFCPAGIS 332 >gi|86151920|ref|ZP_01070133.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|121612601|ref|YP_001001108.1| hypothetical protein CJJ81176_1452 [Campylobacter jejuni subsp. jejuni 81-176] gi|167006002|ref|ZP_02271760.1| hypothetical protein Cjejjejuni_07645 [Campylobacter jejuni subsp. jejuni 81-176] gi|205356108|ref|ZP_03222875.1| hypothetical protein Cj8421_1502 [Campylobacter jejuni subsp. jejuni CG8421] gi|315124896|ref|YP_004066900.1| hypothetical protein ICDCCJ07001_1392 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841028|gb|EAQ58277.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|87249719|gb|EAQ72678.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205345951|gb|EDZ32587.1| hypothetical protein Cj8421_1502 [Campylobacter jejuni subsp. jejuni CG8421] gi|315018618|gb|ADT66711.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 357 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 M ++ K K+ ++ + PL IKDL++D + F +++ +E + Sbjct: 58 ---YMVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|324114121|gb|EGC08094.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Escherichia fergusonii B253] gi|325497743|gb|EGC95602.1| propanediol utilization protein: ferredoxin pduS [Escherichia fergusonii ECD227] Length = 446 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + +++ C C C+ CP + + L P +L++A + Sbjct: 236 DSHPLIQRRKQNDNAVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNF---- 289 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 + + L + C C CP G++P + IK L + + Sbjct: 290 QSVATPQVLLSALT------CSECNVCESVACPVGISPMRINRMIKRELRAQNL 337 >gi|307243115|ref|ZP_07525289.1| electron transport complex, RnfABCDGE type, C subunit [Peptostreptococcus stomatis DSM 17678] gi|306493475|gb|EFM65454.1| electron transport complex, RnfABCDGE type, C subunit [Peptostreptococcus stomatis DSM 17678] Length = 447 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 18/120 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + K + +L ED C+ C C+ CP+ +L P Sbjct: 333 MMGFAQFTDDISTNKGSSGILILDEDIAVAPEPMNCIKCGRCTDVCPA-------FLQP- 384 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + AY D D + R D C +C+ CP +I + K + Sbjct: 385 LFISAYSLKND-FDAAEQHR---AMD------CIECGSCSFICPSRRLLLPSIRQAKREI 434 >gi|288931220|ref|YP_003435280.1| heterodisulfide reductase, subunit C (HdrC) [Ferroglobus placidus DSM 10642] gi|288893468|gb|ADC65005.1| heterodisulfide reductase, subunit C (HdrC) [Ferroglobus placidus DSM 10642] Length = 170 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 12/89 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C + CP D + ++++ + E + L + C Sbjct: 26 SKCIQCGSCMSVCPVTLIGFDH-----PNKKLFKFV-----QMGEE--EVLLSDPSPWAC 73 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C + C + +NP ++ + Sbjct: 74 VACGRCIEVCTQDVNPFSVYFALRRFQVK 102 Score = 35.5 bits (80), Expect = 8.2, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 2/35 (5%) Query: 207 RDEFQGERLDNLED--PFRLYRCHTIMNCTQSCPK 239 R E + + + D + +C +C CP Sbjct: 6 RVEKKKNLVKVISDLGGEGVSKCIQCGSCMSVCPV 40 >gi|218549355|ref|YP_002383146.1| propanediol utilization protein: ferredoxin pduS [Escherichia fergusonii ATCC 35469] gi|218356896|emb|CAQ89528.1| putative propanediol utilization protein: ferredoxin pduS [Escherichia fergusonii ATCC 35469] Length = 446 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + +++ C C C+ CP + + L P +L++A + Sbjct: 236 DSHPLIQRRKQNDNAVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNF---- 289 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 + + L + C C CP G++P + IK L + + Sbjct: 290 QSVATPQVLLSALT------CSECNVCESVACPVGISPMRINRMIKRELRAQNL 337 >gi|227498924|ref|ZP_03929063.1| pyruvate ferredoxin oxidoreductase [Acidaminococcus sp. D21] gi|226904375|gb|EEH90293.1| pyruvate ferredoxin oxidoreductase [Acidaminococcus sp. D21] Length = 1169 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 35/140 (25%), Gaps = 7/140 (5%) Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDM----SHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 +YP + + D++V M H + + T A + Sbjct: 620 WANAADTELYPKTGNAWVDDVMVPMNKQEGHDLPVSKLMGQVDGTFPAGTAAYEKRGIAI 679 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C CS CP + + + + Sbjct: 680 NVPEWKIENCIQCNQCSYVCPHAAIRPVLLNDEEVKAAPAEFTTKPAVGAKDLHFRMMVS 739 Query: 221 PFRLYRCHTIMNCTQSCPKG 240 P C NC +CP Sbjct: 740 PM---DCQGCGNCVDACPAK 756 >gi|224437351|ref|ZP_03658323.1| NADH dehydrogenase subunit I [Helicobacter cinaedi CCUG 18818] gi|313143814|ref|ZP_07806007.1| NADH-quinone oxidoreductase subunit I [Helicobacter cinaedi CCUG 18818] gi|313128845|gb|EFR46462.1| NADH-quinone oxidoreductase subunit I [Helicobacter cinaedi CCUG 18818] Length = 234 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 19/120 (15%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + ++ L + F+S + +++ + +P + R C+ C C Sbjct: 33 LDLLSGLKTALGAFFSPNVTVQ-YPLESNPLSPRYRAIHKLQRLLESENERCIGCGLCEK 91 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 C S R + D + R L+ RC C + CP Sbjct: 92 ICTSNCI---------------RII---TDRGEDGRKKILDYSINFGRCIYCGLCAEVCP 133 >gi|219681490|ref|YP_002467875.1| membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471170|ref|ZP_05635169.1| membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624333|gb|ACL30488.1| membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 473 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 18/118 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ K + +++ + C+ C CS CP Sbjct: 304 KKINNLNHSILKKTNSIFITHKKEKNESISEKTCIRCGYCSYVCPVNLLPQ--------- 354 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q Y ++ + + + C C + CP + K + K +L Sbjct: 355 -QLYWYIKNKNHVQTKKHY--------VLDCIECKACEKVCPSYIPLVKYFIQEKNIL 403 >gi|193212740|ref|YP_001998693.1| FAD linked oxidase domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086217|gb|ACF11493.1| FAD linked oxidase domain protein [Chlorobaculum parvum NCIB 8327] Length = 1222 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C Y+ + P A L D++ E + Sbjct: 777 DHCIRCGKCKPDCCVYYPARGMFYHPRNKNLAIGSLIEALLYDAQRERSTDFSLLQWLEE 836 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ + + ++ +L + Sbjct: 837 VADHCTICHKCLKPCPVDIDTGEV-SILEREILSAR 871 >gi|224583451|ref|YP_002637249.1| ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467978|gb|ACN45808.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 451 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPRLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|169347227|ref|ZP_02866166.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens C str. JGS1495] gi|169296623|gb|EDS78754.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens C str. JGS1495] Length = 436 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C SCP L P L + L D DEF E L ++ C Sbjct: 362 SHCIRCGKCLNSCPMN-------LIPQKLNELA--LKDKFDEF--EFLGGMD-------C 403 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 CT SCP ++ I K L Sbjct: 404 LECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|149197690|ref|ZP_01874740.1| FAD linked oxidase-like protein [Lentisphaera araneosa HTCC2155] gi|149139260|gb|EDM27663.1| FAD linked oxidase-like protein [Lentisphaera araneosa HTCC2155] Length = 958 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 15/128 (11%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSD 188 + + + ++ + C C T CPSY + Sbjct: 523 MDEALRFEAGTLTPDFETMYDFSHEQGYLRAAEFCNGSGDCRKSSLMGGTMCPSYMAEKE 582 Query: 189 RYLGPAILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 R +L D+ E + L C + C CP ++ + Sbjct: 583 EKYTTRARANILREYLRKPFDKSAFEHEEI---KEVLDTCLSCKGCKSECPSNVD----M 635 Query: 248 AKIKMMLL 255 AK+K L Sbjct: 636 AKLKSEFL 643 >gi|78778016|ref|YP_394331.1| NADH dehydrogenase subunit G [Sulfurimonas denitrificans DSM 1251] gi|78498556|gb|ABB45096.1| Ferredoxin [Sulfurimonas denitrificans DSM 1251] Length = 828 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 59/223 (26%), Gaps = 45/223 (20%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 ++ + + P + R S C C + DG AC K+ Sbjct: 12 EIQTQEGEYILNAARANDIFIPAICYLTRCSPTLA-CRLCLVEADGKQVYACNAKSKEGM 70 Query: 109 GAIA----VYPLP---------HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + + + + + Q+ ++E + Sbjct: 71 SVVTSTENIIKERRAIMEVYDVNHPLECGVCDQSGECELQNYTLEMGVDAQHYAVKDVNR 130 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + + C++C C T+C I A + + D + E Sbjct: 131 KDIDWGHIHYNPGLCIVCERCVTTCKDM-----------IGDNALKTVARGADALEAEYK 179 Query: 216 DNL-EDPFRLYR-----------------CHTIMNCTQSCPKG 240 +++ +D + ++ C + C CP G Sbjct: 180 ESMPKDAYAMWNKLNKSLIGLTSGEEMLDCTSCGECAAVCPVG 222 >gi|226944106|ref|YP_002799179.1| cytochrome c oxidase accessory protein CcoG [Azotobacter vinelandii DJ] gi|226719033|gb|ACO78204.1| cytochrome c oxidase accessory protein CcoG [Azotobacter vinelandii DJ] Length = 470 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP + S + +++ D R E +G R N++ L Sbjct: 213 AGFLREQVCVHMCPYARFQSVMFDKDTLIVSY-----DPNRGEQRGPRKKNIDYKAQGLG 267 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C Q CP G++ Sbjct: 268 DCIDCTMCVQVCPTGIDIRD 287 >gi|298246358|ref|ZP_06970164.1| NADH-quinone oxidoreductase, chain I [Ktedonobacter racemifer DSM 44963] gi|297553839|gb|EFH87704.1| NADH-quinone oxidoreductase, chain I [Ktedonobacter racemifer DSM 44963] Length = 208 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 14/122 (11%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 ++K + + + + +I + A H + +GL CV C C+ Sbjct: 3 FEILKGMTTTLKNMGKKPTTISY--PEEERELAPRFRGRHVLHRYDNGLERCVGCYLCAG 60 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y+ A + R GER + D L RC C +CP Sbjct: 61 ACPA----DAIYIEAAENTEEERVSP-------GERYARVFDVNML-RCIFCGYCQAACP 108 Query: 239 KG 240 G Sbjct: 109 TG 110 >gi|297545414|ref|YP_003677716.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843189|gb|ADH61705.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 1171 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 39/159 (24%), Gaps = 27/159 (16%) Query: 103 DMKDIKGAIAV-YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS----PKPAKELLQS 157 + K+ K + P P +K++ M + + + Sbjct: 619 EWKNAKEGQKIVNPEPDF--VKNIQRPMERNEGDLLPVSAFGGMEDGTFPTGTTAYEKRG 676 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + C+ C CS CP +L ++ + Sbjct: 677 IAVLIPEWQIDNCIQCNQCSYVCP--HAVIRPFLLTEEEMKKA-------PPTFKLKKAI 727 Query: 218 LEDPFRLY--------RCHTIMNCTQSCPKGLNPAKAIA 248 L+ C NC CP P KA+ Sbjct: 728 GRGLEGLWYRIQVSPLDCTGCGNCADVCPA---PTKALI 763 >gi|296187945|ref|ZP_06856337.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium carboxidivorans P7] gi|296047071|gb|EFG86513.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium carboxidivorans P7] Length = 757 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 160 DRQKIDGLYECVMCAC--CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +++ I C+ C C C+ +C + + R + + G+ N Sbjct: 292 EQEAIKEASRCIKCQCSECAKACTHLKKYDIK------PKRYIRVINHNESIILGDHYAN 345 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C ++CP LN I + + ++++ Sbjct: 346 KM----INSCTLCGLCKEACPSSLNVKDIIQETRESMVEK 381 >gi|294505488|ref|YP_003569550.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Z176003] gi|262367482|gb|ACY64039.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis D182038] gi|294355947|gb|ADE66288.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Yersinia pestis Z176003] Length = 388 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 13/44 (29%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 17 DGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 60 >gi|269796500|ref|YP_003315955.1| FAD/FMN-dependent dehydrogenase [Sanguibacter keddieii DSM 10542] gi|269098685|gb|ACZ23121.1| FAD/FMN-dependent dehydrogenase [Sanguibacter keddieii DSM 10542] Length = 974 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 10/83 (12%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C CPSY D + + + + G R + Sbjct: 553 HRCVGVGKCRADSTPAGGFMCPSYLATKDEKDSTRGRARVLQEMANGTLVTGGWRSPEVH 612 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 L C + C+ CP G++ Sbjct: 613 --EALDLCLSCKACSSDCPAGVD 633 >gi|195541961|gb|ACF98160.1| putative 4Fe-4S ferredoxin iron-sulfur binding domain protein [uncultured bacterium 1116] Length = 330 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 46/231 (19%) Query: 31 RIYRWNPDNKGNPCMDTYYVDLDNCG--PMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 RI RW+ Y +L G + L +L+++ K P L I Sbjct: 71 RIARWD------ERHKYYNDELTLTGLEEIALSMVLWLEQKGYPAL---------IVPPT 115 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 ++ K +K + L H +V L ++ + V Sbjct: 116 HVD----PWRYQGDPDKPMKP---LLSLDHAAVEAGLGTLG---LNRMLLTPEFGPRVML 165 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY--------WWNSDRYLGPAILLQAY 200 + ++ L + C C ++CP W D+Y P + Sbjct: 166 TGVLSSVPVESGKRMEQALCKGPECGRCLSACPGDVIKHWDRDWAACDKYRSPHGFAKLA 225 Query: 201 RW---LIDSRDEFQGERLDNLEDPFRLYRC--------HTIMNCTQSCPKG 240 ++ ++D D + + + ED F L+ C CP G Sbjct: 226 QFFGKMLDQPDPAKQKAMLRSEDSFYLWESILRGAGVVTGCRRCQDVCPVG 276 >gi|193212603|ref|YP_001998556.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086080|gb|ACF11356.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobaculum parvum NCIB 8327] Length = 276 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + +C+ C C +CP + + + +W+ S + + Sbjct: 158 YWKEQFAKCIKCYACRQACPMCYCRRC-----IVDVNQPQWVSTSSHTLGNFEWNLVRAF 212 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 RC C ++CP + Sbjct: 213 HLAGRCAACGACDRACPVNIPL 234 >gi|311086429|gb|ADP66510.1| membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 451 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 18/118 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ K + +++ + C+ C CS CP Sbjct: 304 KKINNLNHSILKKTNSIFITHKKEKNESISEKTCIRCGYCSYVCPVNLLPQ--------- 354 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Q Y ++ + + + C C + CP + K + K +L Sbjct: 355 -QLYWYIKNKNHVQTKKHY--------VLDCIECKACEKVCPSYIPLVKYFIQEKNIL 403 >gi|268611858|ref|ZP_06145585.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus flavefaciens FD-1] Length = 425 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 23/146 (15%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE----DRQKIDGLYECVM 172 P +++ DM ++ + S+ + C+ Sbjct: 299 PFREILEFCKTDMDAMIKLIGGGPMMGMSIPDVEMPVVKTSNALLAIKSYDVSKTTSCIR 358 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C CP L PA + +AYR + L L + C + Sbjct: 359 CGRCVRVCPME-------LVPADIDRAYRI-------RNIDELKKLN----VLLCMNCGS 400 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRK 258 CT CP A+ ++ L+ RK Sbjct: 401 CTYVCPANRKLAET-NQLAKALIPRK 425 >gi|238763634|ref|ZP_04624594.1| hypothetical protein ykris0001_16190 [Yersinia kristensenii ATCC 33638] gi|238698112|gb|EEP90869.1| hypothetical protein ykris0001_16190 [Yersinia kristensenii ATCC 33638] Length = 387 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 13/44 (29%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D + D L C C +CP + I + K Sbjct: 17 DGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIGDIIQRAK 60 >gi|255036912|ref|YP_003087533.1| D-lactate dehydrogenase (cytochrome) [Dyadobacter fermentans DSM 18053] gi|254949668|gb|ACT94368.1| D-lactate dehydrogenase (cytochrome) [Dyadobacter fermentans DSM 18053] Length = 983 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 27/119 (22%), Gaps = 14/119 (11%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSD 188 + + + + +C C T CPSY Sbjct: 537 MNEFLRYGQDKPNPQIDTVFDFSRQEGMLRLAEKCSGSGDCRKTELTGGTMCPSYMATRS 596 Query: 189 RYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R ++ E + + D C + C CP ++ K Sbjct: 597 ERDTTRARANILRQYLTPETAPATSQEMVKEVLD-----LCLSCKGCKSECPSSVDIGK 650 >gi|289583458|ref|YP_003481868.1| FAD linked oxidase domain protein [Natrialba magadii ATCC 43099] gi|289532956|gb|ADD07306.1| FAD linked oxidase domain protein [Natrialba magadii ATCC 43099] Length = 1070 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 16/114 (14%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L+ + + C CA C CP+Y + L R + Sbjct: 643 LEWDNENGFQGMVELCHGCAGCRGDQETTGGVMCPTYRAAEEESLTTRGRANMLRAAMSG 702 Query: 207 ---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 D E L + D C C + CP ++ AK A+++ R Sbjct: 703 DLETDATDDEFLAEVMD-----LCIGCKGCARDCPSEVDMAKLKAEVEHAAHQR 751 >gi|148925731|ref|ZP_01809419.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845741|gb|EDK22832.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486] Length = 925 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|91214855|ref|ZP_01251828.1| FAD linked oxidase-like protein [Psychroflexus torquis ATCC 700755] gi|91187282|gb|EAS73652.1| FAD linked oxidase-like protein [Psychroflexus torquis ATCC 700755] Length = 976 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 16/115 (13%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGP 193 + + + + +C C S CPSY + Sbjct: 535 RYEVNRVEPEISTKMDFSKSMGILRAAEQCNGSGDCRKSHEFEGGMCPSYQATRNEKDTT 594 Query: 194 AILLQAYRWLI----DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R ++ +S++ F E L + D C + C CP ++ Sbjct: 595 RARANMLREVLTNGHESKNPFDNENLKEIFD-----LCISCKACKNECPSNVDVG 644 >gi|91202359|emb|CAJ75419.1| conserved hypothetical iron sulfur protein [Candidatus Kuenenia stuttgartiensis] Length = 446 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 25/97 (25%), Gaps = 18/97 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q + C+ C C SCP Y N + L Sbjct: 365 QPHYESHACIRCGRCIVSCP-YGLNPSELSIMGESMNISLAL-----------------E 406 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C CT CP I K ++ +K Sbjct: 407 NNVLECKECGCCTYICPAKRPIVHHIKFTKALIAKQK 443 >gi|74316657|ref|YP_314397.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Thiobacillus denitrificans ATCC 25259] gi|74056152|gb|AAZ96592.1| probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Thiobacillus denitrificans ATCC 25259] Length = 483 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE 219 G + C CP + S + + + + + R + Sbjct: 214 AFATWGNAGFMREQVCKYMCPYARFQSVMFDSDTLTVTYDNSIGEPRGPRSRKTDYKAA- 272 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 273 ---GLGTCVDCGVCVQVCPTGIDI 293 >gi|57238598|ref|YP_179729.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni RM1221] gi|57167402|gb|AAW36181.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni RM1221] gi|315059035|gb|ADT73364.1| Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing protein [Campylobacter jejuni subsp. jejuni S3] Length = 923 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|77464661|ref|YP_354165.1| NAD-dependent formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|77389079|gb|ABA80264.1| NAD-dependent formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides 2.4.1] Length = 960 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 28/106 (26%), Gaps = 13/106 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + + + +C++C+ C +C Sbjct: 144 YEAVENHFTPRSAAGDLNPQWMAKDESNPYFTYDPSKCIVCSRCVRACEEVQGT------ 197 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + ID R D F C + C Q+CP Sbjct: 198 -------FALTIDGRGFDSRVSAGMASDSFLTSDCVSCGACVQACP 236 >gi|262203926|ref|YP_003275134.1| FAD linked oxidase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087273|gb|ACY23241.1| FAD linked oxidase domain protein [Gordonia bronchialis DSM 43247] Length = 993 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Query: 170 CVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFR 223 C+ C T+ CPSY D + + ++ R E+ + + Sbjct: 583 CIGVGRCRTTSGGVMCPSYRATRDEKDSTRGRARVLQDMV--RTAPTVEKGWRSADVADA 640 Query: 224 LYRCHTIMNCTQSCPKGLN 242 L C + C+ CP G++ Sbjct: 641 LDLCLSCKACSSDCPTGVD 659 >gi|218780440|ref|YP_002431758.1| formate dehydrogenase, alpha subunit [Desulfatibacillum alkenivorans AK-01] gi|218761824|gb|ACL04290.1| Cytoplasmic formate dehydrogenase, alpha subunit [Desulfatibacillum alkenivorans AK-01] Length = 918 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 35/117 (29%), Gaps = 20/117 (17%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 DL Q + + ++ + KE + + + C+ C C +C Sbjct: 129 DLCPVWGDCRLQDLAFKYQVQGQNIPSDKEYPKDLANPFFVRDYSRCIKCGRCEAACNEV 188 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N A W + +D L + F C C Q+CP G Sbjct: 189 QVN-----------LAIDWNRNDKDASYP-----LANEF----CVYCGECVQTCPVG 225 >gi|71906596|ref|YP_284183.1| NADH dehydrogenase subunit I [Dechloromonas aromatica RCB] gi|115502525|sp|Q47HG8|NUOI_DECAR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71846217|gb|AAZ45713.1| NADH dehydrogenase subunit I [Dechloromonas aromatica RCB] Length = 162 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V +F+++ +++ + H R+ +G C+ C C Sbjct: 15 ELLKGMSVTGKYFFARKITVQY--PEEKTPQSFRFRGLHALRRYPNGEERCIACKLCEAI 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + RD+ D L +C C ++CP Sbjct: 73 CPALAITIE---------------AEPRDDGSRRTTRYDID---LTKCIFCGFCEEACPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|88596568|ref|ZP_01099805.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 84-25] gi|88191409|gb|EAQ95381.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 84-25] Length = 923 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|86149302|ref|ZP_01067533.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni CF93-6] gi|218563174|ref|YP_002344954.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840084|gb|EAQ57342.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni CF93-6] gi|112360881|emb|CAL35682.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926780|gb|ADC29132.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927669|gb|EFV07000.1| FAD binding domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 923 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|290511185|ref|ZP_06550554.1| Cob(III)alamin / Cob(II)alamin reductase [Klebsiella sp. 1_1_55] gi|289776178|gb|EFD84177.1| Cob(III)alamin / Cob(II)alamin reductase [Klebsiella sp. 1_1_55] Length = 450 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|262039817|ref|ZP_06013093.1| propanediol utilization protein PduS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042875|gb|EEW43870.1| propanediol utilization protein PduS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 450 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|238896324|ref|YP_002921060.1| propanediol utilization polyhedral body protein [Klebsiella pneumoniae NTUH-K2044] gi|238548642|dbj|BAH64993.1| propanediol utilization polyhedral body protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 450 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|206579430|ref|YP_002236769.1| propanediol utilization protein PduS [Klebsiella pneumoniae 342] gi|206568488|gb|ACI10264.1| propanediol utilization protein PduS [Klebsiella pneumoniae 342] Length = 450 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|152971737|ref|YP_001336846.1| propanediol utilization: polyhedral bodies [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330009165|ref|ZP_08306449.1| Respiratory-chain NADH dehydrogenase subunit [Klebsiella sp. MS 92-3] gi|150956586|gb|ABR78616.1| Propanediol utilization: polyhedral bodies [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328534884|gb|EGF61421.1| Respiratory-chain NADH dehydrogenase subunit [Klebsiella sp. MS 92-3] Length = 450 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRINRLLKRELRAKNL 341 >gi|168215248|ref|ZP_02640873.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens CPE str. F4969] gi|170713346|gb|EDT25528.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens CPE str. F4969] Length = 436 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 25/89 (28%), Gaps = 22/89 (24%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR- 226 C+ C C SCP + +E L++ L Sbjct: 362 SHCIRCGKCLNSCP------------------MNLIPQKLNELA--LKGKLDEFEFLGGM 401 Query: 227 -CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C CT SCP ++ I K L Sbjct: 402 DCLECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|110637779|ref|YP_677986.1| NADH dehydrogenase I subunit I [Cytophaga hutchinsonii ATCC 33406] gi|123163631|sp|Q11VC0|NUOI_CYTH3 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|110280460|gb|ABG58646.1| NADH dehydrogenase subunit I [Cytophaga hutchinsonii ATCC 33406] Length = 175 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 13/120 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++ +++ +SH + + +I+ V + A H ++ G C C C+ SC Sbjct: 26 IVSGMMITLSHLFKKKATIQY--PEVQREFAFVYRGKHILKRDEQGRENCTACGLCAVSC 83 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ Y + E+ +L + L RC C ++CPK Sbjct: 84 PAEAITIIADERKKGEEHLY----------KEEKYASLYEINML-RCIFCGLCEEACPKD 132 >gi|307748325|gb|ADN91595.1| Putative uncharacterized protein [Campylobacter jejuni subsp. jejuni M1] gi|315930968|gb|EFV09943.1| hypothetical protein CSU_1722 [Campylobacter jejuni subsp. jejuni 327] Length = 357 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ ++ + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GNEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|257066555|ref|YP_003152811.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Anaerococcus prevotii DSM 20548] gi|256798435|gb|ACV29090.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Anaerococcus prevotii DSM 20548] Length = 1178 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 68/227 (29%), Gaps = 34/227 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNK---IDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMK 105 V L + MV+ +I ++ ID + + + G G +I N A + + Sbjct: 551 EVGLGHRTNMVIQTAFFILSEVLPIDDAINYLKESIQASYGMKGQDIVDMNNKAVDRTRE 610 Query: 106 DIKGAIAVYPLPHMSVI--KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ- 162 ++ ++ V +D + + + I + P A + Sbjct: 611 ELSKVEVPESWKNLKVEAAEDNSDEPDFIRNMVKPIINLHEDDLPVSAYLPYDDGQYMAG 670 Query: 163 -------------KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + C+ C CS CP + P +L + E Sbjct: 671 TSQYEKRGIALFVPEWKIDNCIQCNQCSFVCP------HATIRPFLLDDEAKANAPEGFE 724 Query: 210 FQGERLDNLEDPF-----RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + LE Y C NC CP P KA+ ++K Sbjct: 725 TKKAIGKGLEGYEFRIQVSPYDCMGCGNCVDVCPA---PTKAL-EMK 767 >gi|157415684|ref|YP_001482940.1| hypothetical protein C8J_1365 [Campylobacter jejuni subsp. jejuni 81116] gi|157386648|gb|ABV52963.1| hypothetical protein C8J_1365 [Campylobacter jejuni subsp. jejuni 81116] Length = 357 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ ++ + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GNEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|157960582|ref|YP_001500616.1| formate dehydrogenase subunit alpha [Shewanella pealeana ATCC 700345] gi|157845582|gb|ABV86081.1| formate dehydrogenase, alpha subunit [Shewanella pealeana ATCC 700345] Length = 1440 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 30/93 (32%), Gaps = 19/93 (20%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWN------SDRYLGP-----AILLQAYRWLIDSRDEF 210 C+ C C C S + D Y + +Y L DS DE Sbjct: 638 FITFDANRCISCGSCVEICHSASGHNAISFAKDHYQAIPISCDSSCASSYASLRDS-DER 696 Query: 211 QGERL---DNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ++ D C NC Q CP G Sbjct: 697 RAPRVGFSASMNDSD----CVQCGNCVQVCPTG 725 >gi|78358748|ref|YP_390197.1| ferredoxin, 4Fe-4S [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221153|gb|ABB40502.1| ferredoxin, 4Fe-4S, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 439 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 3/118 (2%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR--YLGPA 194 R I + ++Q + C+ C C+ +C Y + Y Sbjct: 15 RGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHYYLSHDGDPSYSPVG 74 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + Q ++ S + + L C+ CT CP G++ ++ ++ Sbjct: 75 KVEQTMWKILRSEGRLTPDDIY-LMAQLAYTECNLCRRCTHYCPVGIDTGYIMSTVRR 131 >gi|21675052|ref|NP_663117.1| DsrK protein [Chlorobium tepidum TLS] gi|21648289|gb|AAM73459.1| dsrK protein [Chlorobium tepidum TLS] Length = 550 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + R + + + L + Sbjct: 94 RSFKVFMDSCVRCGACADKCHFFLGTGDPKNMPVLRAELVRSVYRNDFTGLAKILKDFSG 153 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++C C+ CP G++ A+ ++ +L Sbjct: 154 SRTLTQDVIKEWHMYFHQCTECRRCSVFCPMGIDTAEITMMVRELL 199 >gi|62484855|emb|CAI78872.1| putative dehydrogenase [uncultured bacterium] Length = 846 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 29/107 (27%), Gaps = 15/107 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + L +E+ C+ CA C C LG Sbjct: 186 RKVAEYVGVKEQTPRYRPAGLPVLNEEPLFARDFNLCIDCARCVRVCN--QVRGVEALG- 242 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 I+ A R ++ S L D C C + CP G Sbjct: 243 -IVHNAGRLIVGS-------VAPTLTDS----GCRFCGACVEVCPTG 277 >gi|307266765|ref|ZP_07548290.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918207|gb|EFN48456.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter wiegelii Rt8.B1] Length = 1170 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 24/94 (25%), Gaps = 20/94 (21%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP +L ++ + Sbjct: 681 PEWQIDNCIQCNQCSYVCP--HAVIRPFLLTEEEMKKA-------PSTFKLKKAIGRGLE 731 Query: 223 RLY--------RCHTIMNCTQSCPKGLNPAKAIA 248 L+ C NC CP P KA+ Sbjct: 732 GLWYRIQVSPLDCTGCGNCADVCPA---PTKALI 762 >gi|296169063|ref|ZP_06850723.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896254|gb|EFG75915.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 395 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 36/137 (26%), Gaps = 23/137 (16%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + L +S E Q + C+ C C+ CP+ + S + A Sbjct: 258 RMGRQMPDTDLRDLLFRSRESPQWEEVASRCLTCGNCTMVCPTCFCTSTEDVSDLTGDHA 317 Query: 200 YRW------------LIDS----RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQS 236 RW I R L + C C Sbjct: 318 ERWQNWASCFEPDFTYIHGGGSVRQSGASRYRHWLTHKLGTWHDQFDMSGCVGCGRCIAW 377 Query: 237 CPKGLNPAKAIAKIKMM 253 CP G++ + + K+ Sbjct: 378 CPTGIDITEEMNKMARD 394 >gi|269469176|gb|EEZ80718.1| NADH dehydrogenase I chain I [uncultured SUP05 cluster bacterium] Length = 173 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I + H R+ +G C+ C C CP+ Sbjct: 31 KKITVQFPEERTPISPRFRGLHALRRYPNGEERCIACKLCEAVCPA-------------- 76 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A + RD+ R D L++C C ++CP Sbjct: 77 -NAITIESEMRDDGT--RRTTQYDID-LFKCIFCGFCEEACPVD 116 >gi|255009987|ref|ZP_05282113.1| putative FAD-binding oxidoreductase [Bacteroides fragilis 3_1_12] gi|313147780|ref|ZP_07809973.1| D-lactate dehydrogenase [Bacteroides fragilis 3_1_12] gi|313136547|gb|EFR53907.1| D-lactate dehydrogenase [Bacteroides fragilis 3_1_12] Length = 953 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 31/211 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 V++ ++ D + +K D +L G N +A + + Sbjct: 447 EVEIKRYEALMNDIKKLVVDKYDGSLKAEHGT-------------GRN-MAPFVKQEWGE 492 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 A A+ M +K L F + + L E + + Sbjct: 493 EAFAI-----MKAVKQLFDPKGLFNPGVIFNDDPQCHIKHFKPLSPLAIGEGSEVTRQID 547 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-- 226 C+ C C +C S + L + R + SR + GE LE +LYR Sbjct: 548 RCIECGFCEVNCLSCGFT----LSSRQRIVIQREI--SRLKKSGENPQLLETLSKLYRYP 601 Query: 227 ----CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C SCP G+N ++ Sbjct: 602 GNQTCAGDGLCATSCPMGINTGDLTHLLRQA 632 >gi|254167830|ref|ZP_04874679.1| hypothetical protein ABOONEI_1472 [Aciduliprofundum boonei T469] gi|197623121|gb|EDY35687.1| hypothetical protein ABOONEI_1472 [Aciduliprofundum boonei T469] Length = 133 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 13/92 (14%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 ++ C C CS+ CP + + Q + +L + +D L + + Sbjct: 25 NIFSCYQCGRCSSGCPMAEFMD------VLPNQVFMFLQEG-------DVDTLLNAKTPW 71 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C CT CP GL+ A + I+ + L + Sbjct: 72 ICAACFTCTVRCPVGLDLAAVMEAIRELQLRK 103 >gi|168210001|ref|ZP_02635626.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens B str. ATCC 3626] gi|170711860|gb|EDT24042.1| electron transport complex, RnfABCDGE type, C subunit [Clostridium perfringens B str. ATCC 3626] Length = 436 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 25/89 (28%), Gaps = 22/89 (24%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR- 226 C+ C C SCP + +E L++ L Sbjct: 362 SHCIRCGKCLNSCP------------------MNLIPQKLNELA--LKGKLDEFEFLGGM 401 Query: 227 -CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C CT SCP ++ I K L Sbjct: 402 DCLECGCCTFSCPAKISIVNNIRNAKKSL 430 >gi|257077352|ref|ZP_05571713.1| formate dehydrogenase alpha chain [Ferroplasma acidarmanus fer1] Length = 978 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 29/176 (16%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP-------------LPHMSVIKDLV 126 C +C +N DG AC K+ + P L + + + Sbjct: 42 GAIESCDTCIVNADGKYVRACTTQAKNNMKVLFNSPDVKARETEAVNRILHNHDLYCTVC 101 Query: 127 VDMSHFYSQHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + + + H +++ + P +K + + +C++C C +C Sbjct: 102 ENNNGDCALHSAVDTLQVTRQKYPFTSKGYEPDYSNPFYRYDPDQCILCGRCVEACQDVE 161 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N ++ + L R + + D C + +C CP Sbjct: 162 VNETLHIDWS--------LERPRVVWDDN--KAINDS----SCVSCGHCVTVCPVN 203 >gi|304392865|ref|ZP_07374797.1| cytochrome c oxidase accessory protein CcoG [Ahrensia sp. R2A130] gi|303295033|gb|EFL89401.1| cytochrome c oxidase accessory protein CcoG [Ahrensia sp. R2A130] Length = 540 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 11/85 (12%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + L + A+R S + R + Sbjct: 227 YVFGGLMREQVCTYMCPWPRIQAAMLDEHSL--TVTYNAWRGEPRSLHMKRQRR-----E 279 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 280 GVPVGDCVDCNACVAVCPMGIDIRD 304 >gi|317152093|ref|YP_004120141.1| reductase, iron-sulfur-binding subunit [Desulfovibrio aespoeensis Aspo-2] gi|316942344|gb|ADU61395.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio aespoeensis Aspo-2] Length = 546 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL-- 218 R + CV C C+ C + + D P + + R + G+ L L Sbjct: 90 RTLKLFMDICVRCGACADKCHFFIGSGDPKNMPVLRAELMRSVYRGEFTLAGKILSKLTG 149 Query: 219 ---EDPFRL-------YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + L Y+C C+ CP G++ A+ + ++ Sbjct: 150 SRVMEEDVLKEWFIYFYQCTQCRRCSLYCPYGIDTAEMTMMARELM 195 >gi|269957791|ref|YP_003327580.1| FAD linked oxidase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269306472|gb|ACZ32022.1| FAD linked oxidase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 1010 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 31/117 (26%), Gaps = 17/117 (14%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSD 188 RS H+ ++ CV C CPSY D Sbjct: 556 RSGGALQGIEKKAGHAGFSFRHDHHDLTTAVHRCVGVGKCRADNHASGGFMCPSYQATKD 615 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLN 242 + +D G + L P L C + C+ CP G++ Sbjct: 616 EKDVTRGRARVL------QDAVNGTLIGGLNAPEVRQSLDLCLSCKACSADCPAGVD 666 >gi|205355600|ref|ZP_03222370.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346377|gb|EDZ33010.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421] Length = 925 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|158520785|ref|YP_001528655.1| hypothetical protein Dole_0768 [Desulfococcus oleovorans Hxd3] gi|158509611|gb|ABW66578.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfococcus oleovorans Hxd3] Length = 385 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 13/84 (15%) Query: 161 RQKIDGLYECVMCACCST-------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + + L+ C C C +CP+Y P + + + + E Sbjct: 1 MEHQEILHRCFRCGYCKFPSNYTDINCPAYLAYRFETFAPGGRMWLLSAWLSGKIDVS-E 59 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSC 237 RL + + C NC C Sbjct: 60 RLGRIM-----FSCTGCGNCVAHC 78 >gi|222056798|ref|YP_002539160.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221566087|gb|ACM22059.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 315 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 21/97 (21%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP + + R + Sbjct: 196 AFWKEHFSRCIRCLACRQVCPFCYCEQC----MCDRNRPQAVETTPRPAGNTA-WHIVRA 250 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + + + Sbjct: 251 MHLAGRCAGCAECERACPMDIPL----NLLNRKMAKE 283 >gi|85712566|ref|ZP_01043613.1| Iron-sulfur cluster-binding protein [Idiomarina baltica OS145] gi|85693557|gb|EAQ31508.1| Iron-sulfur cluster-binding protein [Idiomarina baltica OS145] Length = 474 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 24/84 (28%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C+ CP Y +Y R E +G R + Sbjct: 208 AFCTYGNAGYMREIMCTHMCP-YARFQSAMFDKDTYTVSYDAN---RGEPRGPRSRKADP 263 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 264 AEKGLGHCIDCYMCVQVCPTGIDI 287 >gi|57168310|ref|ZP_00367444.1| probable oxidoreductase Cj1585c [Campylobacter coli RM2228] gi|57020118|gb|EAL56792.1| probable oxidoreductase Cj1585c [Campylobacter coli RM2228] Length = 923 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|331085869|ref|ZP_08334952.1| hypothetical protein HMPREF0987_01255 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406792|gb|EGG86297.1| hypothetical protein HMPREF0987_01255 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 373 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 9/139 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP++ VI + M E + + +++ D K C CA Sbjct: 241 LPNVKVILSGMSTMGQVEDNLSIFETFEPLSEKEQKL--IENTADTLKSRVKNGCTGCAY 298 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + QA E ++ +++ + C C + Sbjct: 299 CMP-CPAGVDIPGNFRIW--NDQAVYQNT----EQTKKKWSGMDEKAKADHCIRCGKCEK 351 Query: 236 SCPKGLNPAKAIAKIKMML 254 CP+ ++ + + ++ L Sbjct: 352 VCPQKISIRENLHQVAEEL 370 >gi|302526649|ref|ZP_07278991.1| oxidase [Streptomyces sp. AA4] gi|302435544|gb|EFL07360.1| oxidase [Streptomyces sp. AA4] Length = 974 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 29/119 (24%), Gaps = 11/119 (9%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYW 184 R W ++ CV C S CPSY Sbjct: 528 DENLRLGGSWSPA--EPQDLYFRFPNDGGSFSQAANRCVGVGRCRQSTSDNGDVMCPSYQ 585 Query: 185 WNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + +++ D + + E L C + C CP ++ Sbjct: 586 VTGEEEHSTRGRARLLFEMLNGHHDSPISDGWRSTEVREALDLCLSCKGCKSDCPADVD 644 >gi|288800889|ref|ZP_06406346.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella sp. oral taxon 299 str. F0039] gi|288332350|gb|EFC70831.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella sp. oral taxon 299 str. F0039] Length = 1191 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C+ C C+ CP + ++ + D Sbjct: 675 FEKRGVEAFNPEWTADNCIQCNKCAYVCPHACIRP----FVLDEAEHAQFNDTTLDMKVP 730 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 + + + + C NC CP Sbjct: 731 KTMAGMHFRIQVSVLDCVGCGNCADVCP 758 >gi|153004205|ref|YP_001378530.1| hypothetical protein Anae109_1338 [Anaeromyxobacter sp. Fw109-5] gi|152027778|gb|ABS25546.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5] Length = 166 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 9/101 (8%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + EDR + CV C C C L + + SR Sbjct: 46 PTTAEDRAVAEAASSCVSCGLCEPRCELAGAAP----AVRALGLHAAFRLYSRSAAALPL 101 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C CP G+ ++ + ++ ++ Sbjct: 102 AAEALS-----ACAGCAGCDALCPTGVPISRIVRHLRAKVV 137 >gi|24373095|ref|NP_717138.1| iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] gi|24347281|gb|AAN54582.1|AE015598_1 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 914 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D + +C+ C C +CP+ N A L + R L S D+ ++ Sbjct: 516 DDFVDKCIECGFCEKTCPTSALNFSPRQRIATLREIER-LEQSGDKAAAAKMRADAKYDV 574 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + C CT +CP + + + K++ Sbjct: 575 IDTCAACQLCTIACPVDNSMGQLVRKLR 602 >gi|295103724|emb|CBL01268.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Faecalibacterium prausnitzii SL3/3] Length = 1174 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 24/85 (28%), Gaps = 8/85 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C+ C +L A L A SRD + Sbjct: 683 PEWDAAKCVGCNQCAFVCS--HATIRPFLLTADELAAAPAQTKSRDNKLTPEYKFVMAVS 740 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C C CP KAI Sbjct: 741 PL-DCMGCGECVTVCP-----TKAI 759 >gi|317133605|ref|YP_004092919.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] gi|315471584|gb|ADU28188.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] Length = 482 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 11/96 (11%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 S+E + + +C C C +CP + + P + A + + Sbjct: 102 HKCHAACPFGAISYEKHRAVIDPEKCRECGRCMKACPYHAIIERQ--RPCVAGCAAKAI- 158 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 E ++ + RC + NC CP G Sbjct: 159 ----EIDDQKKAKINYD----RCTSCGNCVYQCPFG 186 >gi|171057439|ref|YP_001789788.1| FAD linked oxidase domain-containing protein [Leptothrix cholodnii SP-6] gi|170774884|gb|ACB33023.1| FAD linked oxidase domain protein [Leptothrix cholodnii SP-6] Length = 1309 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 842 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGISIRHWEEFEDV 901 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 902 AE--HCTVCHKCLSPCPVKIDFGDVSMNMRNLL 932 >gi|160944252|ref|ZP_02091481.1| hypothetical protein FAEPRAM212_01761 [Faecalibacterium prausnitzii M21/2] gi|158444434|gb|EDP21438.1| hypothetical protein FAEPRAM212_01761 [Faecalibacterium prausnitzii M21/2] Length = 1206 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 24/85 (28%), Gaps = 8/85 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C+ C +L A L A SRD + Sbjct: 715 PEWDAAKCVGCNQCAFVCS--HATIRPFLLTADELAAAPAQTKSRDNKLTPEYKFVMAVS 772 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C C CP KAI Sbjct: 773 PL-DCMGCGECVTVCP-----TKAI 791 >gi|154496410|ref|ZP_02035106.1| hypothetical protein BACCAP_00699 [Bacteroides capillosus ATCC 29799] gi|150274493|gb|EDN01570.1| hypothetical protein BACCAP_00699 [Bacteroides capillosus ATCC 29799] Length = 416 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 9/132 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP + + + M ++ P+ A L + + G C C Sbjct: 281 LPGVMTVLSGMSAMEQVEDNIATMSPFQPLTEEDRAV--LARAVEVYRSAGTIPCTGCRY 338 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ CP + P I ++ +D + D + + R +C C Sbjct: 339 CTD-CPKHV------DIPRIFAIYNQFCVDGKKSSFDNTWDLIPESMRPDQCVRCGQCVD 391 Query: 236 SCPKGLNPAKAI 247 CP+ + I Sbjct: 392 RCPQHIAIPDRI 403 >gi|307352200|ref|YP_003893251.1| aldo/keto reductase [Methanoplanus petrolearius DSM 11571] gi|307155433|gb|ADN34813.1| aldo/keto reductase [Methanoplanus petrolearius DSM 11571] Length = 406 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 8/141 (5%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + + R E L + EL + ++ + C C+ C Sbjct: 243 PEVTVVLSGMTETDQLDENLRIAEEGLPGSLTEEELELAKRAGEKYREIMKVGCTGCSYC 302 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE--FQGERLDNLEDPFRLYR-CHTIMNC 233 CP + + +Y D R E RL L + C C Sbjct: 303 MP-CPFGVNIPACF----EIYNSYHMFDDKRHEKFMYMSRLGGLLNKKSAASLCRNCGRC 357 Query: 234 TQSCPKGLNPAKAIAKIKMML 254 ++CP+ ++ + K+K + Sbjct: 358 VKACPQHIDIPNELKKVKNDM 378 >gi|284163801|ref|YP_003402080.1| FAD linked oxidase [Haloterrigena turkmenica DSM 5511] gi|284013456|gb|ADB59407.1| FAD linked oxidase domain protein [Haloterrigena turkmenica DSM 5511] Length = 1024 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 11/112 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L+ D + C C C CP+Y + + A R + Sbjct: 599 LEWDTDNGMQGMVELCHGCGGCRGEQETTGGVMCPTYRASREEITATRGRANALRQAMSG 658 Query: 207 RDEFQGERLDN-LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E D +E+ L C C CP ++ AK A++ R Sbjct: 659 NLEPDEAVSDEFVEEVMGL--CIGCKGCAIDCPSEVDMAKLKAEVTHEYHQR 708 >gi|86159440|ref|YP_466225.1| FAD linked oxidase-like [Anaeromyxobacter dehalogenans 2CP-C] gi|85775951|gb|ABC82788.1| FAD linked oxidase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 1213 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 5/85 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGE--RLDNLE-DP 221 + CV C C C Y + P A LI++ D + R + L Sbjct: 767 IAHCVRCGKCKPDCCVYHPARGMFFHPRNKNLAIGSLIEALLYDAQRKRSTRFELLRWLE 826 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ K Sbjct: 827 EVADHCTICHKCLKPCPVDIDSGKV 851 >gi|17545999|ref|NP_519401.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum GMI1000] gi|17428294|emb|CAD14982.1| probable iron-sulfur 4fe-4s ferredoxin transmembrane protein [Ralstonia solanacearum GMI1000] Length = 477 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 16/110 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 +E W ++ P +L G + C CP S + D Y+ Sbjct: 184 MEVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT 240 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + SR+E R L C C Q CP G++ Sbjct: 241 YDTQRGEPRGSRSRNEDFAAR--------GLGACVDCSICVQVCPTGIDI 282 >gi|86139116|ref|ZP_01057687.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Roseobacter sp. MED193] gi|85824347|gb|EAQ44551.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Roseobacter sp. MED193] Length = 448 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 4/72 (5%) Query: 176 CSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP + + +R + + D + P C M C Sbjct: 182 CIYACPWPRIQAAMMDEDTLVVGYRDWRGEPRGKLNKNKGKADVADPPQG--DCIDCMAC 239 Query: 234 TQSCPKGLNPAK 245 CP G++ Sbjct: 240 VNVCPVGIDIRD 251 >gi|328952551|ref|YP_004369885.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452875|gb|AEB08704.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfobacca acetoxidans DSM 11109] Length = 421 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D + C C CS CP S R +A R ++ + Sbjct: 17 RFADLISAAHVNACYTCGTCSGGCPLTGMESTR-DERLDCRKALRMVLLGME-------Q 68 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 L D + C C CP G+ + K + ++ Sbjct: 69 ELIDSRFPWICTACYRCLAGCPMGVKLTDIWTRAKALRPREQV 111 >gi|305432381|ref|ZP_07401543.1| oxidoreductase [Campylobacter coli JV20] gi|304444420|gb|EFM37071.1| oxidoreductase [Campylobacter coli JV20] Length = 925 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 531 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 590 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 591 LVDSSCAACGVCSFSCPLGINFAD 614 >gi|254449936|ref|ZP_05063373.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 238] gi|198264342|gb|EDY88612.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 238] Length = 441 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + I + W + R + D + C M C Sbjct: 177 CIYACPWPRIQAAMMDEDTITIGYRSWRGEPR-----KHSDAITKETPQGDCIDCMACVN 231 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 232 VCPVGIDIRD 241 >gi|121997094|ref|YP_001001881.1| RnfABCDGE type electron transport complex subunit C [Halorhodospira halophila SL1] gi|121588499|gb|ABM61079.1| electron transport complex, RnfABCDGE type, C subunit [Halorhodospira halophila SL1] Length = 506 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 21/91 (23%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP D A L C Sbjct: 369 RPCIRCGRCVDACPMGLMPFDIANRAAAGDVDG------------------AAATGLMDC 410 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 T +C CP + + L ++ Sbjct: 411 LTCGSCAYVCPSARPLVQLFHYARGQLAEQA 441 >gi|167581036|ref|ZP_02373910.1| formate dehydrogenase, alpha subunit [Burkholderia thailandensis TXDOH] Length = 984 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R DSR D D Sbjct: 187 YFSYDPAKCIVCNRCVRAC-------EETQGTFALTIAAR-GFDSRVAASAG--DAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|159905760|ref|YP_001549422.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus maripaludis C6] gi|159887253|gb|ABX02190.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus maripaludis C6] Length = 387 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 27/114 (23%), Gaps = 10/114 (8%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K + + +C+ C C CP ++ Sbjct: 262 EDYKNKWLEEEYPTIEEWNRQWNKCIKCYGCRDVCPVC--------FCRECALNADYIDT 313 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + C C CP + A+ K++ RK+ Sbjct: 314 GSIPPNPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQEK--TRKV 365 >gi|323703675|ref|ZP_08115317.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531390|gb|EGB21287.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Desulfotomaculum nigrificans DSM 574] Length = 315 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C+ C C +CP + + + W+ S L Sbjct: 195 AFIAKEMSKCIRCYACRQACPMCYCSEC-----FVDCNTPAWIGKSAKSIDDNALFQAVR 249 Query: 221 PFRL-YRCHTIMNCTQSCPKGLNP 243 F L RC C ++CP G+ Sbjct: 250 VFHLAGRCVDCGACERACPMGIKL 273 >gi|311694579|gb|ADP97452.1| iron-sulfur cluster-binding protein [marine bacterium HP15] Length = 463 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L L+ Y +R E +G R + L C C Sbjct: 215 CLHMCP-YGRFQSSMLDQDSLVITYDA---ARGESRGPRKKGADYKSEGLGDCIDCQMCV 270 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 271 QVCPTGIDIRD 281 >gi|291528935|emb|CBK94521.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium rectale M104/1] Length = 443 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 20/115 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T + E C+ C C +CP L P+ + ++ Sbjct: 342 PTTKTSSSILCFTHDEVAAFEPQA--CINCGRCVEACP-------EQLIPS---RLAKFG 389 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + +D E L C +C+ +CP A+ I +K ++L K Sbjct: 390 LRGQ-------MDEFEKWHGLE-CIECGSCSFACPSRRQVAQPIKTMKKLVLAEK 436 >gi|194368700|pdb|3CF4|A Chain A, Structure Of The Codh Component Of The M. Barkeri Acds Complex Length = 807 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 21/102 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + ++ + +C C C +CP + +Y + + Sbjct: 407 DEELVNMVAKCADCGACLLACPEEIDIPEAMGFAKKGDFSY--------------FEEIH 452 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI--KMMLLDRKI 259 D C C Q C K + I KI K + ++ + Sbjct: 453 DT-----CIGCRRCEQVCKKEIPILNVIEKIAQKQIAEEKGL 489 >gi|56696440|ref|YP_166797.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56678177|gb|AAV94843.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 926 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 23/78 (29%), Gaps = 14/78 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N +G A + + D DP Sbjct: 147 MRVNLDACINCNLCVRACREVQVND--VIGMAGRGAGAQVVFD------------QNDPM 192 Query: 223 RLYRCHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 193 GASTCVACGECVQACPTG 210 >gi|314958755|gb|EFT02857.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL002PA1] Length = 416 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|308125451|ref|ZP_05775364.2| electron transport complex protein RnfC [Vibrio parahaemolyticus K5030] gi|308111312|gb|EFO48852.1| electron transport complex protein RnfC [Vibrio parahaemolyticus K5030] Length = 528 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C C+ +CP+ L P L Sbjct: 9 SQVPITKTANCILAPTRHEISAHQYEMECIRCGQCAEACPAS-------LLPQQLQWH-- 59 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E D LE L C C CP + + Sbjct: 60 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQ 94 >gi|303326145|ref|ZP_07356588.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio sp. 3_1_syn3] gi|302864061|gb|EFL86992.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [Desulfovibrio sp. 3_1_syn3] Length = 1181 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 17/145 (11%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P V ++L V F + + ++ A L + + + C C C Sbjct: 683 PAKLVHRELPVRPFTF--------SFNRLINDIHASGLPDKEKLISLLTAIQICTRCGKC 734 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDNLEDPFRLYRCHT 229 C + P L++ ++ L L D + C Sbjct: 735 KQVCSMCYPERSMQYHPRNKNMVLGMLLEAVYYSQVNKGRIDERLLKWLRDL--VEHCTA 792 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 C +CP + + ++ +L Sbjct: 793 CGRCMANCPVKIPSGEVALTLRALL 817 >gi|302532956|ref|ZP_07285298.1| oxidoreductase [Streptomyces sp. C] gi|302441851|gb|EFL13667.1| oxidoreductase [Streptomyces sp. C] Length = 980 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR--- 223 C+ C C +CPS D P + R + +R + L D + Sbjct: 572 ADPCIECGFCEPTCPS----GDLTTTPRQRIVLRREM--TRQRPGSPVVAELLDAYGYDA 625 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C +CP G++ + + Sbjct: 626 VDTCAGDSTCMLACPVGIDTGALMRDFRHR 655 >gi|261402826|ref|YP_003247050.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus vulcanius M7] gi|261369819|gb|ACX72568.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus vulcanius M7] Length = 379 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 65/221 (29%), Gaps = 21/221 (9%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCREGICGSCGMNIDGTNTLAC 100 +D + V + L L R R C C + + +AC Sbjct: 140 KVDPFDVVKEEIDKGKFIIKLKNGEHKAIKIDELEERGFGRRKSCQRCEVMVPRMADIAC 199 Query: 101 -VKDMKDIKGAIAVYPLPHMSVIK--------DLVVDMSHFYSQHRSIEPWLKTVSPKPA 151 ++ + + +I+ ++ IE + ++ K Sbjct: 200 GNWGAEEGWTFVEICSERGKELIENAKKEGYIEVKEPSERAIKIREKIENSMIKLAKKFQ 259 Query: 152 KELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 K L+ + + Y C+ C C CP + R L + + + D Sbjct: 260 KIHLEDNFPSLEEWKKYWNRCIKCYGCRDICPLCFCEDCR-LEKDYVDEKGKIPPDPL-M 317 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 FQG RL ++ C C CP + A ++ Sbjct: 318 FQGIRLSHVSQ-----SCINCGQCEDVCPMDIPLAYIFHRM 353 >gi|238924003|ref|YP_002937519.1| rnfC/nqrF [Eubacterium rectale ATCC 33656] gi|238875678|gb|ACR75385.1| rnfC/nqrF [Eubacterium rectale ATCC 33656] gi|291524744|emb|CBK90331.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium rectale DSM 17629] Length = 443 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 20/115 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 T + E C+ C C +CP L P+ + ++ Sbjct: 342 PTTKTSSSILCFTHDEVAAFEPQA--CINCGRCVEACP-------EQLIPS---RLAKFG 389 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + +D E L C +C+ +CP A+ I +K ++L K Sbjct: 390 LRGQ-------MDEFEKWHGLE-CIECGSCSFACPSRRQVAQPIKTMKKLVLAEK 436 >gi|257126678|ref|YP_003164792.1| electron transport complex, RnfABCDGE type, C subunit [Leptotrichia buccalis C-1013-b] gi|257050617|gb|ACV39801.1| electron transport complex, RnfABCDGE type, C subunit [Leptotrichia buccalis C-1013-b] Length = 458 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 18/85 (21%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C +CP + D ++ + E++ + C Sbjct: 385 CISCGYCVEACPMNLMPFE--------------FADYYEKGKYEKMIKAN----IQNCIE 426 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 C CP + ++I K +L Sbjct: 427 CGACEFVCPSRVPLIESIKNGKAIL 451 Score = 36.3 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 9/18 (50%) Query: 226 RCHTIMNCTQSCPKGLNP 243 C + C ++CP L P Sbjct: 384 SCISCGYCVEACPMNLMP 401 >gi|83718922|ref|YP_442160.1| formate dehydrogenase subunit alpha [Burkholderia thailandensis E264] gi|167619114|ref|ZP_02387745.1| formate dehydrogenase, alpha subunit [Burkholderia thailandensis Bt4] gi|257138349|ref|ZP_05586611.1| formate dehydrogenase, alpha subunit [Burkholderia thailandensis E264] gi|83652747|gb|ABC36810.1| formate dehydrogenase, alpha subunit [Burkholderia thailandensis E264] Length = 984 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R DSR D D Sbjct: 187 YFSYDPAKCIVCNRCVRAC-------EETQGTFALTIAAR-GFDSRVAASAG--DAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|58038499|ref|YP_190463.1| putative oxidoreductase [Gluconobacter oxydans 621H] gi|58000913|gb|AAW59807.1| Putative oxidoreductase [Gluconobacter oxydans 621H] Length = 813 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 32/140 (22%), Gaps = 18/140 (12%) Query: 122 IKDLVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHED-----RQKIDGLYECVMCAC 175 IKD+ F + ED R+ C Sbjct: 398 IKDVFDPKDIFNRGKLAPGGAGYPVDRIDSIPFKGSFDEDIAPALREPYALSISCNGNGA 457 Query: 176 C------STSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLDNLEDPF---R 223 C CPSY DR P R R D + + Sbjct: 458 CFNREPDMAMCPSYKATKDRSQSPKGRALLLRSWARLRSLPDNAPDREMLPVLTEELKAS 517 Query: 224 LYRCHTIMNCTQSCPKGLNP 243 L C + C CP ++ Sbjct: 518 LDTCLSCKACATQCPIRVDI 537 >gi|15612208|ref|NP_223861.1| D-lactate dehydrogenase [Helicobacter pylori J99] gi|4155750|gb|AAD06729.1| D-LACTATE DEHYDROGENASE [Helicobacter pylori J99] Length = 946 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 23/137 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGLLNPDVIITNDKEIHTKNLKSIYPIEEHLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + DE Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREVERLKERVSHGHDEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKAIA 248 C+ CP G++ +IA Sbjct: 613 MCSTLCPLGID-TGSIA 628 >gi|314956257|gb|EFT00629.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL027PA1] Length = 416 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|195541937|gb|ACF98137.1| putative nitrogen fixation protein FixG [uncultured bacterium 1062] Length = 520 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 21/81 (25%), Gaps = 3/81 (3%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ CP ++ + W + R + + + Sbjct: 218 YTFGGLMREQVCTYMCPWPRIQGAMLDENSLTVTYNDWRGEPR---TRHAKKAIAEGKPV 274 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 275 GDCVDCNACVVVCPMGIDIRD 295 >gi|167947658|ref|ZP_02534732.1| hypothetical protein Epers_14392 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 67 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%) Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + + C CPKG+ A+ I ++ + L + Sbjct: 5 EAIWLCVSCLTCNTRCPKGVRIAELIESLRQVKLRAR 41 >gi|218778461|ref|YP_002429779.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfatibacillum alkenivorans AK-01] gi|218759845|gb|ACL02311.1| Sulfite reduction-associated complex , DsrK [Desulfatibacillum alkenivorans AK-01] Length = 539 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 53/185 (28%), Gaps = 25/185 (13%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVI----KDLVVDMSHFYSQHRSIEPWLKTV 146 + N D I P M K L + + IE Sbjct: 10 EMAAINHTPPKTGWMDTPAVIR----PGMYCYSAKAKPLNILSMPYGRDWDPIEDDWHLP 65 Query: 147 SPKPAKELLQSHED----RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 L HE R + CV C C+ C + + D P + + R Sbjct: 66 ENWIEIVLEGLHERLHKFRSLQLFMDVCVRCGACADKCHFFIGSGDPKNMPVLRAELLRS 125 Query: 203 LIDSRDEFQGERLDNLEDPFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKI 250 + G+ L + +L ++C C+ CP G++ A+ I I Sbjct: 126 VYRKEYTLAGKLLGKMVGARKLDERVLKEWWTYFFQCTECRRCSVFCPYGIDTAE-ITII 184 Query: 251 KMMLL 255 LL Sbjct: 185 GRELL 189 >gi|160941885|ref|ZP_02089212.1| hypothetical protein CLOBOL_06781 [Clostridium bolteae ATCC BAA-613] gi|158435382|gb|EDP13149.1| hypothetical protein CLOBOL_06781 [Clostridium bolteae ATCC BAA-613] Length = 327 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 24/90 (26%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C C +D D + L Y C Sbjct: 11 DKCIHCHLCQKHCSFLTKYG----------------VDIGDTAKLRALA--------YHC 46 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C++ CP G++ I ++ ++ Sbjct: 47 FLCGKCSEVCPIGIDGRGIILDMRRAQVEE 76 >gi|56695736|ref|YP_166087.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56677473|gb|AAV94139.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 925 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 23/78 (29%), Gaps = 14/78 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N +G A + + D DP Sbjct: 147 MRVNLDACINCNLCVRACREVQVND--VIGMAGRGAGAQVVFD------------QNDPM 192 Query: 223 RLYRCHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 193 GASTCVACGECVQACPTG 210 >gi|11498700|ref|NP_069929.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Archaeoglobus fulgidus DSM 4304] gi|38502842|sp|O29165|ACDA1_ARCFU RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 1; Short=ACDS complex subunit alpha 1; AltName: Full=ACDS complex carbon monoxide dehydrogenase 1; Short=ACDS CODH 1 gi|2649482|gb|AAB90136.1| acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA-1) [Archaeoglobus fulgidus DSM 4304] Length = 802 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 18/106 (16%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 ++ D ++ + +C C C +CP L+ + + Sbjct: 381 KKHGGERKYKFFESDEALMEEINKCTQCMNCVFTCP-------------HSLRVDQGMAH 427 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ +L LE+ C M C Q+CPK + I + Sbjct: 428 AQKTGDLSKLAQLEEQ-----CLACMKCEQACPKNIKIINVIMRAN 468 >gi|260893191|ref|YP_003239288.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] gi|260865332|gb|ACX52438.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] Length = 318 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 29/101 (28%), Gaps = 14/101 (13%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDS--RDEFQGERLDNL 218 C+ C C CP+ + + P + W+ + E L Sbjct: 203 FWDRAFKRCLRCYACREVCPACSCHECCFDPPLPGWQRTVDWMSKACYLPEIYQYHLTRA 262 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 RC C + CP + MLL RK+ Sbjct: 263 L--HVAGRCGECGECERVCPVKIPL---------MLLARKL 292 >gi|239908885|ref|YP_002955627.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239798752|dbj|BAH77741.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 437 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + CV C C+ +C Y + D P + W + D + Sbjct: 40 ARMKTYMETCVRCGMCAKACHYYMSHKDPSYTPVAKVSQTMWRLFDADGKVDPEVIYQCA 99 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C+ C CP G++ I+ ++ + Sbjct: 100 QVAYTECNLCRRCIHYCPLGIDTGYIISVVRRL 132 >gi|45358860|ref|NP_988417.1| formate dehydrogenase subunit beta [Methanococcus maripaludis S2] gi|29650130|gb|AAO85929.1| formate dehydrogenase beta subunit [Methanococcus maripaludis] gi|45047726|emb|CAF30853.1| formate dehydrogenase beta subunit [Methanococcus maripaludis S2] Length = 387 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 23/105 (21%), Gaps = 8/105 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K + + +C+ C C CP ++ Sbjct: 262 EDYKNKWLEEKYPTIEEWNRQWNKCIKCYGCRDVCPVC--------FCRECALTADYVDT 313 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + C C CP + A+ KI Sbjct: 314 GSIPPDPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKI 358 >gi|300727115|ref|ZP_07060534.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella bryantii B14] gi|299775659|gb|EFI72250.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella bryantii B14] Length = 1196 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 10/90 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--RDEF 210 + E + + C+ C CS CP + P +L +A + +D Sbjct: 675 YEKRGVETFVPVWNVENCIQCNKCSFVCP------HAAVRPFVLDEAEKANFQGATQDIL 728 Query: 211 QGERLDNLED--PFRLYRCHTIMNCTQSCP 238 + L + + C NC CP Sbjct: 729 APKALKGMNFRIQVSVLDCLGCGNCADVCP 758 >gi|282936126|gb|ADB04320.1| putative NADH:acceptor oxidoreductase [bacterium enrichment culture clone N47] gi|308274032|emb|CBX30631.1| hypothetical protein N47_E41430 [uncultured Desulfobacterium sp.] Length = 840 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 16/129 (12%) Query: 120 SVIKDLVVDMSH-FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 V + V+ + + + + L +D C+ C C Sbjct: 144 KVEERCCVNFGNCELQKVAEYIGIPEDTGRYIPQNLPIIKDDPLYNRNFNLCIGCLRCVR 203 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +C S N + D R ++ L + C C + CP Sbjct: 204 ACNSLREND----------VLGFVVKDGRVIVGPKKAPMLREAD----CRFCGACVEVCP 249 Query: 239 KGLNPAKAI 247 G I Sbjct: 250 TG-ALTDKI 257 >gi|90110038|sp|Q53046|NIFJ_RHORT RecName: Full=Pyruvate-flavodoxin oxidoreductase Length = 1191 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A+ + + C+ C C CP A Sbjct: 673 PTETARWEKRDIAQQVCSWDADLCIQCNKCVMVCPHAALRVKAVPAEAAAALPASMNSTP 732 Query: 207 ---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D+ +G P C C ++CP Sbjct: 733 YKGKDDLKGSAYVLALSPE---DCTGCGICVEACP 764 >gi|453436|emb|CAA54651.1| pyruvate oxidoreductase [Rhodospirillum rubrum] Length = 1191 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A+ + + C+ C C CP A Sbjct: 673 PTETARWEKRDIAQQVCSWDADLCIQCNKCVMVCPHAALRVKAVPAEAAAALPASMNSTP 732 Query: 207 ---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D+ +G P C C ++CP Sbjct: 733 YKGKDDLKGSAYVLALSPE---DCTGCGICVEACP 764 >gi|239815798|ref|YP_002944708.1| cytochrome C oxidase accessory protein CcoG [Variovorax paradoxus S110] gi|239802375|gb|ACS19442.1| cytochrome c oxidase accessory protein CcoG [Variovorax paradoxus S110] Length = 486 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 7/78 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP Y L+ +Y D R E + R ++ L Sbjct: 225 AGFMREQVCKYMCP-YARFQSAMFDRDTLIVSY----DPKRGEPRAPRRKGIDPRSMALG 279 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 280 DCIDCGLCVQVCPTGIDI 297 >gi|83593733|ref|YP_427485.1| pyruvate-ferredoxin (flavodoxin) oxidoreductase [Rhodospirillum rubrum ATCC 11170] gi|83576647|gb|ABC23198.1| Pyruvate-ferredoxin (flavodoxin) oxidoreductase [Rhodospirillum rubrum ATCC 11170] Length = 1186 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 24/95 (25%), Gaps = 6/95 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + A+ + + C+ C C CP A Sbjct: 668 PTETARWEKRDIAQQVCSWDADLCIQCNKCVMVCPHAALRVKAVPAEAAAALPASMNSTP 727 Query: 207 ---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D+ +G P C C ++CP Sbjct: 728 YKGKDDLKGSAYVLALSPE---DCTGCGICVEACP 759 >gi|89093172|ref|ZP_01166122.1| probable ferredoxin [Oceanospirillum sp. MED92] gi|89082468|gb|EAR61690.1| probable ferredoxin [Oceanospirillum sp. MED92] Length = 474 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ + R E +G+R + L C C Sbjct: 223 CIYMCPYARFQSVMFDQDTLIIS----YDEKRGENRGKRKKGSDYKAKGLGDCIDCNACV 278 Query: 235 QSCPKGLNPAKAIAK 249 CP G++ + Sbjct: 279 HVCPVGIDIRDGLQY 293 >gi|297569863|ref|YP_003691207.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925778|gb|ADH86588.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 250 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 17/74 (22%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQ-AYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C C + +++ GP LQ A ++ D RD + Sbjct: 61 SNCSGCGACLNVCHTMGYDAIAMAGPRHGLQGATPYIKDMRD----------------FP 104 Query: 227 CHTIMNCTQSCPKG 240 C M C CP G Sbjct: 105 CTLCMECPSQCPTG 118 >gi|292493660|ref|YP_003529099.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] gi|291582255|gb|ADE16712.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] Length = 162 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 35/115 (30%), Gaps = 23/115 (20%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + H R+ +G C+ C C CP Sbjct: 30 KKVTVQFPEERTPQSPRFRGLHALRRYPNGEERCIACKLCEAVCP--------------- 74 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A IDS G R L D L++C C +SCP +I + + Sbjct: 75 --ALAITIDSEQREDGTRRTTLYDID-LFKCIYCGFCEESCPV-----DSIVETR 121 >gi|241765437|ref|ZP_04763406.1| FAD linked oxidase domain protein [Acidovorax delafieldii 2AN] gi|241364810|gb|EER59788.1| FAD linked oxidase domain protein [Acidovorax delafieldii 2AN] Length = 1305 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 834 DCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 893 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 894 --ADHCTVCHKCLSPCPVKIDFGDVTMNMRNLL 924 >gi|331699756|ref|YP_004335995.1| D-lactate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326954445|gb|AEA28142.1| D-lactate dehydrogenase (cytochrome) [Pseudonocardia dioxanivorans CB1190] Length = 1050 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 8/116 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC------STSCPSYWWN 186 Y +++ +P +D CV C T CPSY Sbjct: 554 YRMDENLKLGTDYNPWRPEVRFAYPQDDGDFAHAALRCVGVGKCRDPEPAQTMCPSYQVT 613 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++ R E + + E L C CT CP ++ Sbjct: 614 REEKHTTRGRSRLLFEML--RGEVITDGWQSKEVADGLELCLACKGCTSDCPVDVD 667 >gi|296133458|ref|YP_003640705.1| putative heterodisulfide reductase, C subunit [Thermincola sp. JR] gi|296032036|gb|ADG82804.1| putative heterodisulfide reductase, C subunit [Thermincola potens JR] Length = 193 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 11/99 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + +C C CS C + + R + + D + Sbjct: 23 RMSGQDVRKCYQCGKCSAGCAVHRCEG----FDVSPNRVMRMVQLGME-------DEVLR 71 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++ C CT CP+ ++ A+ + +++M + I Sbjct: 72 TKTIWTCVLCSTCTARCPRDIDIARVMDALRIMSKKKNI 110 >gi|293375054|ref|ZP_06621346.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] gi|292646347|gb|EFF64365.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] Length = 168 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 16/137 (11%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP++ ++ + ++ ++ ++ + ++ + C C Sbjct: 41 LPNVMMVLSGMSNLEQLLDNTAYMQNFVPFNEEEFKIV--ETATQIIQNQDFIPCTNCQY 98 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP ++ L +S + L+ + + C C + Sbjct: 99 CVEGCPKKIAIPSYFI-----------LYNSDTTQKEAYLNYTQTHGKASDCIGCKKCER 147 Query: 236 SCPKGLNPAKAIAKIKM 252 CP+ L I +K Sbjct: 148 MCPQHLPI---IQYLKE 161 >gi|218200865|gb|EEC83292.1| hypothetical protein OsI_28652 [Oryza sativa Indica Group] Length = 673 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 20/114 (17%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 361 YAFRRKVTVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESDVR 420 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + R+ ID L +C C +SCP + A Sbjct: 421 ADGSRRTTRYDID------------------LTKCIFCGFCEESCP--IRFMDA 454 >gi|254412467|ref|ZP_05026241.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Microcoleus chthonoplastes PCC 7420] gi|196180777|gb|EDX75767.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Microcoleus chthonoplastes PCC 7420] Length = 1204 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 29/103 (28%), Gaps = 3/103 (2%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P T K ++ + CV C C CP Y + Sbjct: 662 AMPVDGTFPTGTTKWEKRNVALEVPVWDPDVCVQCGKCVMVCPHAVIRGKSYDSQVLENA 721 Query: 199 AYRW-LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D+RD+ G + ++ + C C CP Sbjct: 722 PDSFKSTDTRDKEYGGQKFTIQVA--VEDCTGCGICVDVCPAK 762 >gi|118498233|ref|YP_899283.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. novicida U112] gi|156503296|ref|YP_001429361.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica FTNF002-00] gi|194324417|ref|ZP_03058190.1| NADH-quinone oxidoreductase, chain i family [Francisella tularensis subsp. novicida FTE] gi|208780260|ref|ZP_03247602.1| NADH-quinone oxidoreductase, chain i family [Francisella novicida FTG] gi|254373574|ref|ZP_04989060.1| NADH dehydrogenase I [Francisella tularensis subsp. novicida GA99-3549] gi|254375041|ref|ZP_04990521.1| NADH-quinone oxidoreductase subunit I [Francisella novicida GA99-3548] gi|290952997|ref|ZP_06557618.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica URFT1] gi|295313817|ref|ZP_06804390.1| NADH dehydrogenase subunit I [Francisella tularensis subsp. holarctica URFT1] gi|156633519|sp|A0Q8G4|NUOI_FRATN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|166918792|sp|A7NEK2|NUOI_FRATF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|118424139|gb|ABK90529.1| NADH dehydrogenase I, I subunit [Francisella novicida U112] gi|151571298|gb|EDN36952.1| NADH dehydrogenase I [Francisella novicida GA99-3549] gi|151572759|gb|EDN38413.1| NADH-quinone oxidoreductase subunit I [Francisella novicida GA99-3548] gi|156253899|gb|ABU62405.1| NADH-quinone oxidoreductase, chain I [Francisella tularensis subsp. holarctica FTNF002-00] gi|194321482|gb|EDX18967.1| NADH-quinone oxidoreductase, chain i family [Francisella tularensis subsp. novicida FTE] gi|208743909|gb|EDZ90211.1| NADH-quinone oxidoreductase, chain i family [Francisella novicida FTG] gi|332184788|gb|AEE27042.1| NADH-ubiquinone oxidoreductase chain I [Francisella cf. novicida 3523] gi|332678969|gb|AEE88098.1| NADH-ubiquinone oxidoreductase chain I [Francisella cf. novicida Fx1] Length = 162 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L V HF+++ +++ + H R+ +G C+ C C Sbjct: 15 ELLKGLKVTGKHFFTRKVTVQY--PDEKTPISNRFRGLHALRRYENGEERCIACKLCEVV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + ID L++C C +SCP Sbjct: 73 CPALAITINSTEREDGTRRTSSYEID------------------LFKCIFCGYCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|187921584|ref|YP_001890616.1| D-lactate dehydrogenase [Burkholderia phytofirmans PsJN] gi|187720022|gb|ACD21245.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phytofirmans PsJN] Length = 1007 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G D + Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLAISGQLGEAGLASDEV--KE 653 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + + R Sbjct: 654 TLDLCVSCKGCKRDCPTGVDMAKFKIEARAARVKR 688 >gi|217970164|ref|YP_002355398.1| NADH dehydrogenase subunit I [Thauera sp. MZ1T] gi|217507491|gb|ACK54502.1| NADH-quinone oxidoreductase, chain I [Thauera sp. MZ1T] Length = 161 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 25/132 (18%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + HF+ R I + H R+ +G C+ C C Sbjct: 14 ELVKGMALTGRHFFQ--RKITILFPEEKTPQSNRFRGLHALRRYPNGEERCIACKLCEAI 71 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + D RD+ D L +C C ++CP Sbjct: 72 CPAMAITIES---------------DQRDDGSRRTTRYDID---LTKCIFCGFCEEACPV 113 Query: 240 GLNPAKAIAKIK 251 AI + + Sbjct: 114 -----DAIVETR 120 >gi|154248924|ref|YP_001409749.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1] gi|154152860|gb|ABS60092.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1] Length = 667 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 61/207 (29%), Gaps = 30/207 (14%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNTLACVKDMKDI 107 V++ N VL+ L + +I P L G C C + +DG M Sbjct: 9 EVEIRNDARNVLEALREVGIEI-PNLCYLSETSVYGACRMCLVEVDGREITTSCTLMPRE 67 Query: 108 KGAIA-----VYPLPHMSVIKDL--------VVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 I +Y + + L +M+ + + + T + Sbjct: 68 GMEIKTHTPKIYEMRKGILQLLLASHDGDCTTCEMNGKCKLQKYAQDFGLTTNRFEKISK 127 Query: 155 LQSHEDRQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + I +C++C C +C A + AYR E Sbjct: 128 KTITDKNSIIVRDNAKCILCGDCVRACDEIQT-------VAAIDFAYRGFEAQVVPSFEE 180 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +L+N E C C CP G Sbjct: 181 KLENTE-------CVFCGQCVAYCPTG 200 >gi|317486154|ref|ZP_07944998.1| hypothetical protein HMPREF0179_02353 [Bilophila wadsworthia 3_1_6] gi|316922603|gb|EFV43845.1| hypothetical protein HMPREF0179_02353 [Bilophila wadsworthia 3_1_6] Length = 554 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 14/109 (12%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL--- 215 + R + CV C C+ C + +D P + + R + RD RL Sbjct: 81 KHRSLKIFMDTCVRCGACADKCHFFLGTNDPKNMPVLRAELLRSVYR-RDFTTAGRLLGK 139 Query: 216 ---------DNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D +++ F Y+C C+ CP G++ A+ A ++ +L Sbjct: 140 VAGARKLTTDVIKEWFTYFYQCTECRRCSLFCPYGIDTAEITAIVRELL 188 >gi|314965968|gb|EFT10067.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL082PA2] Length = 416 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|262381166|ref|ZP_06074304.1| electron transport complex protein [Bacteroides sp. 2_1_33B] gi|301311165|ref|ZP_07217093.1| Na(+)-translocating NADH-quinone reductase, A subunit [Bacteroides sp. 20_3] gi|262296343|gb|EEY84273.1| electron transport complex protein [Bacteroides sp. 2_1_33B] gi|300830739|gb|EFK61381.1| Na(+)-translocating NADH-quinone reductase, A subunit [Bacteroides sp. 20_3] Length = 443 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 18/101 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ + +C+ CA C CP L P +L+ A + Sbjct: 353 LLLTKEESVRKPIRDCIRCAKCVGVCPM-------GLNPTLLMNATEFQN---------- 395 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + + C +C+ +CP I K ++ Sbjct: 396 -WELAEKNYITDCIECGSCSYTCPANRPLLDQIRLGKGKVM 435 >gi|240171844|ref|ZP_04750503.1| ferredoxin [Mycobacterium kansasii ATCC 12478] Length = 377 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 46/159 (28%), Gaps = 24/159 (15%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 PH + D + + + + + + L++S E Q + C+ C C Sbjct: 215 PHRAASSDEMDC-ARADVEAATHRMGRQMPDADLRELLVRSRESPQWEEVASRCLTCGNC 273 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRW------------LIDS----RDEFQGERLDNLED 220 + CP+ + S + A RW + R L Sbjct: 274 TMVCPTCYCTSTEDVTDLTGEHAERWQHWASCYEFDFTYVHGGGSVRRSGASRYRHWLTH 333 Query: 221 PFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + C C CP G++ + + K+ Sbjct: 334 KLGTWHDQFDMSGCVGCGRCIAWCPTGIDITEEMNKMAR 372 >gi|254492559|ref|ZP_05105731.1| hypothetical protein MDMS009_2901 [Methylophaga thiooxidans DMS010] gi|224462451|gb|EEF78728.1| hypothetical protein MDMS009_2901 [Methylophaga thiooxydans DMS010] Length = 43 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 1/44 (2%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + C C CPK +N AI + +L + Sbjct: 1 MLKAMEDEGFGSCSNYRECESVCPKEIN-VSAITTMNRLLYRSR 43 >gi|50843682|ref|YP_056909.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Propionibacterium acnes KPA171202] gi|289425932|ref|ZP_06427684.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes SK187] gi|289428167|ref|ZP_06429866.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes J165] gi|50841284|gb|AAT83951.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Propionibacterium acnes KPA171202] gi|289153708|gb|EFD02417.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes SK187] gi|289158647|gb|EFD06851.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes J165] gi|313765142|gb|EFS36506.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL013PA1] gi|313794121|gb|EFS42141.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL110PA1] gi|313803242|gb|EFS44438.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL110PA2] gi|313808577|gb|EFS47037.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL087PA2] gi|313813930|gb|EFS51644.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL025PA1] gi|313817133|gb|EFS54847.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL059PA1] gi|313819079|gb|EFS56793.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL046PA2] gi|313821643|gb|EFS59357.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL036PA1] gi|313823779|gb|EFS61493.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL036PA2] gi|313826883|gb|EFS64597.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL063PA1] gi|313839224|gb|EFS76938.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL086PA1] gi|314916852|gb|EFS80683.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL005PA4] gi|314919030|gb|EFS82861.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL050PA1] gi|314921140|gb|EFS84971.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL050PA3] gi|314926119|gb|EFS89950.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL036PA3] gi|314932514|gb|EFS96345.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL067PA1] gi|314960959|gb|EFT05060.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL002PA2] gi|314964017|gb|EFT08117.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL082PA1] gi|314968781|gb|EFT12879.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL037PA1] gi|314979085|gb|EFT23179.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL072PA2] gi|314985934|gb|EFT30026.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL005PA2] gi|314989243|gb|EFT33334.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL005PA3] gi|315078264|gb|EFT50303.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL053PA2] gi|315081429|gb|EFT53405.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL078PA1] gi|315084928|gb|EFT56904.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL027PA2] gi|315087459|gb|EFT59435.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL002PA3] gi|315089631|gb|EFT61607.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL072PA1] gi|315100067|gb|EFT72043.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL059PA2] gi|315107325|gb|EFT79301.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL030PA1] gi|327334008|gb|EGE75723.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL096PA3] gi|327334426|gb|EGE76137.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL097PA1] gi|327450381|gb|EGE97035.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL013PA2] gi|327455540|gb|EGF02195.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL087PA3] gi|327456197|gb|EGF02852.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL083PA2] gi|327457554|gb|EGF04209.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL092PA1] gi|328756795|gb|EGF70411.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL087PA1] gi|328757684|gb|EGF71300.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL020PA1] gi|328759078|gb|EGF72694.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL025PA2] gi|332676636|gb|AEE73452.1| anaerobic glycerol-3-phosphate dehydrogenase subunit C [Propionibacterium acnes 266] Length = 416 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|86152276|ref|ZP_01070487.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 260.94] gi|315124993|ref|YP_004066997.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840765|gb|EAQ58016.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 260.94] gi|315018715|gb|ADT66808.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 681 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + L C+ C C CPS + AIL + R + DE + + D + Sbjct: 289 DEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKAKLKDIKKYYNH 348 Query: 224 L--YRCHTIMNCTQSCPKGLNPAK 245 L C C+ SCP G+N A Sbjct: 349 LVDSSCAACGVCSFSCPLGINFAD 372 >gi|313829253|gb|EFS66967.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL063PA2] gi|315110525|gb|EFT82501.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL030PA2] Length = 416 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|313113215|ref|ZP_07798836.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624467|gb|EFQ07801.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Faecalibacterium cf. prausnitzii KLE1255] Length = 1181 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 8/85 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +CV C C+ C + A L A SRD + Sbjct: 690 PEWDAAKCVGCNQCAFVCS--HATIRPFQLTADELAAAPAQTKSRDNKPANEYKFVMAVS 747 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C C CP KAI Sbjct: 748 PL-DCMGCGECVTVCP-----TKAI 766 >gi|322417569|ref|YP_004196792.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|322420731|ref|YP_004199954.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320123956|gb|ADW11516.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] gi|320127118|gb|ADW14678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 314 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 20/97 (20%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP + + R + Sbjct: 195 AFWKEHFSRCIRCMACRQVCPFCYCEQC----LCDKNRPQAVESSPRPAGNTA-WHLVRA 249 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C + CP + + + Sbjct: 250 MHLAGRCGGCAECERVCPMDIPL----NLLNRRMAQE 282 >gi|218708971|ref|YP_002416592.1| electron transport complex protein RnfC [Vibrio splendidus LGP32] gi|218321990|emb|CAV18000.1| Electron transport complex protein RnfC (fragment) [Vibrio splendidus LGP32] Length = 663 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 18/114 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + + EC+ C+ C+ +CP+ ++L Q +W Sbjct: 82 PITKTSNCILAPTRREISPSTYEMECIRCSACAEACPA-----------SLLPQQLQWHA 130 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + + E L+ + C C CP + + + K + RK Sbjct: 131 KANELDKCEELN-------IKDCIECGACAFVCPSEIPLVQYYRQAKAEIKTRK 177 >gi|33602300|ref|NP_889860.1| putative ferredoxin [Bordetella bronchiseptica RB50] gi|33576739|emb|CAE33817.1| putative ferredoxin [Bordetella bronchiseptica RB50] Length = 496 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 G + + C CP Y + + Y R E +G R ++ Sbjct: 226 WGNAGFMRESVCKYMCP-YARFQSVMVDHDTFVVTYDK---RRGEPRGGRSRKIDHKAAG 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 282 LGDCVDCSLCVQVCPTGIDIRDGLQYM 308 >gi|33593178|ref|NP_880822.1| putative ferredoxin [Bordetella pertussis Tohama I] gi|33563553|emb|CAE42451.1| putative ferredoxin [Bordetella pertussis Tohama I] gi|332382589|gb|AEE67436.1| putative ferredoxin [Bordetella pertussis CS] Length = 496 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 G + + C CP Y + + Y R E +G R ++ Sbjct: 226 WGNAGFMRESVCKYMCP-YARFQSVMVDHDTFVVTYDK---RRGEPRGGRSRKIDHKAAG 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 282 LGDCVDCSLCVQVCPTGIDIRDGLQYM 308 >gi|315105314|gb|EFT77290.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL050PA2] Length = 416 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|298528244|ref|ZP_07015648.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Desulfonatronospira thiodismutans ASO3-1] gi|298511896|gb|EFI35798.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Desulfonatronospira thiodismutans ASO3-1] Length = 682 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 52/208 (25%), Gaps = 36/208 (17%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE-GICGSCGMNIDG--TNTLACVKDMKD- 106 ++ M L + P L + + G C C + ++G +AC +K Sbjct: 13 EVQAPAGMNLIDAAELAGIHIPNLCYLKGMKGIGACRMCLVEVEGLKAPVIACNTKVKQD 72 Query: 107 ---IKGAIAVYPLPHMSVIKDLVVDMSHFY------------SQHRSIEPWLKTVSPKPA 151 V + V DL++ M + ++ + Sbjct: 73 MAVHTRTERVQEIRRFVV--DLILSMHPLDCVTCTKSGVCNLQDYAYEFGLRESSFSRKK 130 Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + C++C C C N ++G I + E Sbjct: 131 FTYPVDEGNPFVKRDPAYCILCGRCVRVCKEQGTNVLDFMGRGIESKVITANDMPLHES- 189 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPK 239 C +C CP Sbjct: 190 --------------GCTFCGSCIDVCPV 203 >gi|207723881|ref|YP_002254279.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum MolK2] gi|206589086|emb|CAQ36048.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum MolK2] Length = 163 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 31 RKITVLFPEEKTPLSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIES------- 83 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D RD+ D L +C C ++CP Sbjct: 84 --------DQRDDGTRRTTRYDID---LTKCIFCGFCEEACPVD 116 >gi|167771614|ref|ZP_02443667.1| hypothetical protein ANACOL_02986 [Anaerotruncus colihominis DSM 17241] gi|167666254|gb|EDS10384.1| hypothetical protein ANACOL_02986 [Anaerotruncus colihominis DSM 17241] Length = 437 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E + ++ + C+ C C +CP + P + +AY + E Sbjct: 349 LAFDESQTVVEPEHPCIRCGRCMQNCPYHLM-------PRQIEKAY----------ESEN 391 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + L+ ++ C C+ CP N Sbjct: 392 IAMLQ-KLKVMLCMECGCCSFVCPAKRNLT 420 >gi|120405063|ref|YP_954892.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957881|gb|ABM14886.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 1193 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 23/80 (28%), Gaps = 5/80 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP S Y G + + D L ++ Sbjct: 686 WDPDTCIQCGNCGFVCPHSVIRSKFYDGSQLAGAPADFDSAPLDAVG---LPGARFSLQV 742 Query: 225 Y--RCHTIMNCTQSCPKGLN 242 Y C C ++CP + Sbjct: 743 YTEDCTGCGLCVEACPVVIP 762 >gi|282854530|ref|ZP_06263866.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes J139] gi|282582391|gb|EFB87772.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes J139] gi|314922012|gb|EFS85843.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL001PA1] gi|314980709|gb|EFT24803.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL110PA3] gi|315090972|gb|EFT62948.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL110PA4] Length = 416 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|212223200|ref|YP_002306436.1| Sulfhydrogenase II, beta chain [Thermococcus onnurineus NA1] gi|212008157|gb|ACJ15539.1| Sulfhydrogenase II, beta chain [Thermococcus onnurineus NA1] Length = 334 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 20/109 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWW------NSDRYLGPAILLQAYRWLID----------- 205 + C+ C C+ CP+ Y ++ + Sbjct: 222 WKEYAEICLACGNCNMVCPTCRCYEVCDNWISAYDAVRERRYDSCFMENHGLVAGGHNFR 281 Query: 206 -SRDEFQGERL--DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 +R + R + DP Y C C + CP + K + +++ Sbjct: 282 PTRLDRFRHRYYCKSYFDPSSGYNCVGCGRCDEFCPAKIEHVKVLEEVR 330 >gi|220918315|ref|YP_002493619.1| FAD linked oxidase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956169|gb|ACL66553.1| FAD linked oxidase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 1212 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 5/85 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGE--RLDNLE-DP 221 + CV C C C Y + P A LI++ D + R + L Sbjct: 767 IAHCVRCGKCKPDCCVYHPARGMFFHPRNKNLAIGSLIEALLYDAQRKRSTRFELLRWLE 826 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ K Sbjct: 827 EIADHCTICHKCLKPCPVDIDSGKV 851 >gi|197123516|ref|YP_002135467.1| FAD linked oxidase [Anaeromyxobacter sp. K] gi|196173365|gb|ACG74338.1| FAD linked oxidase domain protein [Anaeromyxobacter sp. K] Length = 1212 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 5/85 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGE--RLDNLE-DP 221 + CV C C C Y + P A LI++ D + R + L Sbjct: 767 IAHCVRCGKCKPDCCVYHPARGMFFHPRNKNLAIGSLIEALLYDAQRKRSTRFELLRWLE 826 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ K Sbjct: 827 EIADHCTICHKCLKPCPVDIDSGKV 851 >gi|160942347|ref|ZP_02089655.1| hypothetical protein CLOBOL_07232 [Clostridium bolteae ATCC BAA-613] gi|158434711|gb|EDP12478.1| hypothetical protein CLOBOL_07232 [Clostridium bolteae ATCC BAA-613] Length = 450 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 9/90 (10%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C+ C+ CP Y L P ++++ + + + E + C Sbjct: 255 CIQCSYCTQMCPRYLT--GHPLKPHMIMRKLAYAQSPEEVLEDEHVRQAMI------CSE 306 Query: 230 IMNCTQ-SCPKGLNPAKAIAKIKMMLLDRK 258 C +CP GL P + +K +L K Sbjct: 307 CGLCETYACPMGLQPRQVNIYVKNLLRQNK 336 >gi|53804214|ref|YP_114196.1| oxidoreductase [Methylococcus capsulatus str. Bath] gi|53757975|gb|AAU92266.1| putative oxidoreductase [Methylococcus capsulatus str. Bath] Length = 1308 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R ED Sbjct: 837 DCLRCGKCKPVCSTHVPQANLPYSPRNKILATSLLIEAFLYEEQTRRGVSITHWKEFEDV 896 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ + ++ +L Sbjct: 897 --ADHCTVCHKCYNPCPVDIDFGQVSMNMRNLL 927 >gi|17546773|ref|NP_520175.1| NADH dehydrogenase subunit I [Ralstonia solanacearum GMI1000] gi|83746305|ref|ZP_00943358.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] gi|187929285|ref|YP_001899772.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12J] gi|207742743|ref|YP_002259135.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] gi|241663476|ref|YP_002981836.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12D] gi|309781860|ref|ZP_07676593.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] gi|81504319|sp|Q8XXQ9|NUOI_RALSO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|17429073|emb|CAD15761.1| probable nadh dehydrogenaseI(chainI oxidoreductase protein [Ralstonia solanacearum GMI1000] gi|83727055|gb|EAP74180.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] gi|187726175|gb|ACD27340.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12J] gi|206594137|emb|CAQ61064.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] gi|240865503|gb|ACS63164.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12D] gi|299066341|emb|CBJ37525.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CMR15] gi|308919501|gb|EFP65165.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] Length = 163 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 31 RKITVLFPEEKTPLSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIES------- 83 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D RD+ D L +C C ++CP Sbjct: 84 --------DQRDDGTRRTTRYDID---LTKCIFCGFCEEACPVD 116 >gi|330503012|ref|YP_004379881.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] gi|328917298|gb|AEB58129.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] Length = 471 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLY 225 + C CP + S + +++ D R E +G R + + L Sbjct: 214 AGYLREQVCIYMCPYARFQSVMFDQDTLIVSY-----DPRRGEKRGPRKKDADYKAQGLG 268 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C Q CP G++ Sbjct: 269 DCIDCKMCVQVCPTGIDIRD 288 >gi|315924585|ref|ZP_07920804.1| Na(+)-translocating NADH-quinone reductase subunit A [Pseudoramibacter alactolyticus ATCC 23263] gi|315622115|gb|EFV02077.1| Na(+)-translocating NADH-quinone reductase subunit A [Pseudoramibacter alactolyticus ATCC 23263] Length = 410 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 19/101 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ + C+ C C++ CP + L P +L D Q +R ++ Sbjct: 320 KEAAQTPEPTACIRCGRCASVCPIH-------LQPFLLA----------DYAQHKRWEDC 362 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML-LDRK 258 ++ L C +C+ CP +I K + +RK Sbjct: 363 DELHAL-DCVECGSCSFICPAKRTLVSSIRVGKRQVQAERK 402 >gi|57238483|ref|YP_179614.1| hypothetical protein CJE1633 [Campylobacter jejuni RM1221] gi|57167287|gb|AAW36066.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|315058914|gb|ADT73243.1| hypothetical protein CJS3_1540 [Campylobacter jejuni subsp. jejuni S3] Length = 357 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ ++ + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|328952767|ref|YP_004370101.1| formate dehydrogenase, alpha subunit [Desulfobacca acetoxidans DSM 11109] gi|328453091|gb|AEB08920.1| formate dehydrogenase, alpha subunit [Desulfobacca acetoxidans DSM 11109] Length = 902 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 32/205 (15%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGTNTLACVKDMKDIK---- 108 + G +L+ PTL ++ G C C + I+G TLA Sbjct: 16 DPGQTILEVARQAGIYSIPTLCYMKNTHPTGSCRVCVVEIEGWRTLAPACSTAATAGMVI 75 Query: 109 ----------GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL---KTVSPKPAKELL 155 + + L LV + + + + + P Sbjct: 76 KTESERVTAARKMVIELLLSSGNHNCLVCEANGACELQALAYRYQVPTPSFAAPPDTPYY 135 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +++ + +C+MC C +C N + YR + + Sbjct: 136 FEDDNKLIVRDFSKCIMCGRCVRACNEIQVN-------RAIQIGYR-------GSHNKIV 181 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 + P++ C C Q+CP G Sbjct: 182 AKSDLPYKDSDCVFCGQCVQACPVG 206 >gi|299531488|ref|ZP_07044894.1| heterodisulfide reductase [Comamonas testosteroni S44] gi|298720451|gb|EFI61402.1| heterodisulfide reductase [Comamonas testosteroni S44] Length = 1299 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 829 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 888 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 889 --ADHCTVCHKCFNPCPVKIDFGDVTMNMRNLL 919 >gi|264676926|ref|YP_003276832.1| heterodisulfide reductase [Comamonas testosteroni CNB-2] gi|262207438|gb|ACY31536.1| heterodisulfide reductase [Comamonas testosteroni CNB-2] Length = 1299 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 829 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 888 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 889 --ADHCTVCHKCFNPCPVKIDFGDVTMNMRNLL 919 >gi|295131772|ref|YP_003582435.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes SK137] gi|291375563|gb|ADD99417.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium acnes SK137] gi|313771589|gb|EFS37555.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL074PA1] gi|313811987|gb|EFS49701.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL083PA1] gi|313832421|gb|EFS70135.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL007PA1] gi|313834148|gb|EFS71862.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL056PA1] gi|314975086|gb|EFT19181.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL053PA1] gi|314977497|gb|EFT21592.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL045PA1] gi|314985875|gb|EFT29967.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL005PA1] gi|315096873|gb|EFT68849.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL038PA1] gi|327333015|gb|EGE74747.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL096PA2] gi|327448722|gb|EGE95376.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL043PA1] gi|327449083|gb|EGE95737.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL043PA2] gi|328762187|gb|EGF75683.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL099PA1] Length = 416 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|148925631|ref|ZP_01809319.1| hypothetical protein Cj8486_1497 [Campylobacter jejuni subsp. jejuni CG8486] gi|145845641|gb|EDK22732.1| hypothetical protein Cj8486_1497 [Campylobacter jejuni subsp. jejuni CG8486] Length = 357 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 10/127 (7%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K +K+ ++ + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIVKEFDFSLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPK 149 K Sbjct: 115 GDEEDKK 121 >gi|315102772|gb|EFT74748.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL046PA1] Length = 416 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|294102861|ref|YP_003554719.1| aldo/keto reductase [Aminobacterium colombiense DSM 12261] gi|293617841|gb|ADE57995.1| aldo/keto reductase [Aminobacterium colombiense DSM 12261] Length = 381 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 6/92 (6%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ K +C C C CP + + ++ D + + Sbjct: 285 KEEYKRRMKVDCTNCRYCMP-CPQGVNIPECF-----NRYNMAFMFDDEKMAKDTYFVFV 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 +D R C C + CP+ L + + ++ Sbjct: 339 KDYERASLCVECGACEEVCPQNLPIRQQLKEV 370 >gi|283853097|ref|ZP_06370352.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B] gi|283571495|gb|EFC19500.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B] Length = 585 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 59/223 (26%), Gaps = 43/223 (19%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKID---PTLTL------RRSCREGICGSCGMNIDGT 95 M T +D +L K+D PTL R + + C C + + G Sbjct: 3 MMTITIDGKTTSVPADSTILDAARKLDIDIPTLCYLNLEDLRINNKGASCRICVVEVQGR 62 Query: 96 NTLACVKDMK----DIKGAIAVYPLPHMSVI---------KDLVVD-MSHFYSQHRSIEP 141 LA + + L + KD +V S E Sbjct: 63 RNLAPACATPVSEGMVVKTNTLRVLNARRTVLELLLSDHPKDCLVCAKSGECELQTLAER 122 Query: 142 WLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWWNS--DRYLGPAILL 197 + SP E+ +D + +C+MC C T C + Sbjct: 123 FGVRESPYDGGEMSHYRKDISPSIIRDMDKCIMCRRCETMCNVVQTCGVLSGVNRGFTAV 182 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 A + ++ D C C CP G Sbjct: 183 VAPAFEMNLADTV----------------CTNCGQCVAVCPVG 209 >gi|260911000|ref|ZP_05917638.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260911003|ref|ZP_05917640.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634878|gb|EEX52931.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634907|gb|EEX52959.1| fumarate reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 46 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 1/45 (2%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + + C C CPK + A IA++ + K+ Sbjct: 1 MVMTMEELGFGNCTNTRACEAECPKNESIAN-IARLNREFISAKL 44 >gi|302528257|ref|ZP_07280599.1| D-lactate dehydrogenase [Streptomyces sp. AA4] gi|302437152|gb|EFL08968.1| D-lactate dehydrogenase [Streptomyces sp. AA4] Length = 954 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 7/81 (8%) Query: 167 LYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 CV C ++ CPSY + ++ G R + D Sbjct: 551 SRRCVGVGKCVSASGGMMCPSYRATGKEEHSTRGRARLLFEMLAGDVLEDGWRSPEVRDA 610 Query: 222 FRLYRCHTIMNCTQSCPKGLN 242 L C C CP G++ Sbjct: 611 --LDLCLGCKACKSDCPVGVD 629 >gi|224367244|ref|YP_002601407.1| putative D-lactate dehydrogenase (FAD / iron-sulfur cluster-binding domain protein) [Desulfobacterium autotrophicum HRM2] gi|223689960|gb|ACN13243.1| putative D-lactate dehydrogenase (FAD / iron-sulfur cluster-binding domain protein) [Desulfobacterium autotrophicum HRM2] Length = 946 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 35/127 (27%), Gaps = 6/127 (4%) Query: 133 YSQHRSIEPWLKTVSP------KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 Q ++I ++P + + + + C+ C C CPS Sbjct: 499 MKQIKNIFDPHGILNPGVILNDDAQAHIKNLKPMPEADEIIDTCIECGFCEPVCPSRHIT 558 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + R + + R + C T C CP +N Sbjct: 559 FSPRHRIVGWRETKRLEKEKPGSSELNRHLKGYAYDAMATCATDGLCKTRCPVDINTGTF 618 Query: 247 IAKIKMM 253 I K++ Sbjct: 619 IKKLRAR 625 >gi|325960198|ref|YP_004291664.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325331630|gb|ADZ10692.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 204 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R K G +C+ C C+ SCPS + D + RD + ++L Sbjct: 29 RFKKSGFKKCIQCGRCTGSCPSTVIHKD---------------FNPRDMMRRFMFEDLNS 73 Query: 221 PFR---LYRCHTIMNCTQSCPKG 240 +++C +C CP+ Sbjct: 74 DHVNEIIWKCGQCYSCRSRCPRN 96 >gi|217969702|ref|YP_002354936.1| cytochrome C oxidase accessory protein CcoG [Thauera sp. MZ1T] gi|217507029|gb|ACK54040.1| cytochrome c oxidase accessory protein CcoG [Thauera sp. MZ1T] Length = 477 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNL 218 + +Y+ P QA + D+ R E +G R + Sbjct: 202 FWILFYAGFTYLFAGVLREQVCKYMCPYARFQAVMFDPDTLVITYDEARGEPRGTRKKGI 261 Query: 219 EDPFRL--YRCHTIMNCTQSCPKGLNPAKAIAK 249 DP + C C Q CP G++ + Sbjct: 262 -DPRSVSKGDCIDCGICVQVCPTGIDIRDGLQY 293 >gi|315095196|gb|EFT67172.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL060PA1] gi|327328824|gb|EGE70584.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL103PA1] Length = 416 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|307305166|ref|ZP_07584915.1| cytochrome c oxidase accessory protein CcoG [Sinorhizobium meliloti BL225C] gi|306902506|gb|EFN33101.1| cytochrome c oxidase accessory protein CcoG [Sinorhizobium meliloti BL225C] Length = 524 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 11/85 (12%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + L + +R SR + + Sbjct: 221 YVFGGLMREQVCTYMCPWPRIQAAMLDENSL--VVTYNDWRGEPRSRHAKKAAAAGEV-- 276 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 277 ---VGDCVDCNACVAVCPMGIDIRD 298 >gi|290955595|ref|YP_003486777.1| anaerobic sulfite reductase subunit A [Streptomyces scabiei 87.22] gi|260645121|emb|CBG68207.1| putative anaerobic sulfite reductase subunit A [Streptomyces scabiei 87.22] Length = 375 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 32/114 (28%), Gaps = 22/114 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW------------LIDS 206 E + D C+ C C+ CP+ + + + RW + Sbjct: 247 EAERWDDVAARCLTCGNCTMVCPTCFCVTTEEVTDLTGDHTERWQRWDSCFDLDFSHLHE 306 Query: 207 RDEFQGER----------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R L D F C C CP G++ + +A + Sbjct: 307 GPVRASGRSRYRQWLTHKLGTWHDQFGTSGCVGCGRCIAWCPTGIDITEEVAAL 360 >gi|150402467|ref|YP_001329761.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus maripaludis C7] gi|150033497|gb|ABR65610.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus maripaludis C7] Length = 387 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 23/105 (21%), Gaps = 8/105 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K + + +C+ C C CP ++ Sbjct: 262 EDYKNKWLEEKYPSIEEWNRQWNKCIKCYGCRDVCPVC--------FCKECALTADYIDT 313 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + C C CP + A+ KI Sbjct: 314 GSIPPDPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKI 358 >gi|32267096|ref|NP_861128.1| NADH dehydrogenase subunit G [Helicobacter hepaticus ATCC 51449] gi|32263148|gb|AAP78194.1| donor-ubiquinone reductase I [Helicobacter hepaticus ATCC 51449] Length = 824 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 39/198 (19%) Query: 72 PTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL-------------P 117 P + C + C C ++IDG +C K+ + P Sbjct: 33 PAICYLSGCSPTMACKLCMVDIDGKRNYSCNTKAKEGMNILTHTPEINEERNAIMQSYDV 92 Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + + Q+ +++ + + + + C+MC C+ Sbjct: 93 NHPLQCGVCDKSGECELQNYTLKMNVTNQHYSIKESNKPHKSWAKAVYDPNLCIMCERCA 152 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFRLYR---------- 226 T+C L+A + ++ D E++ D ++ Sbjct: 153 TTCKDNL--------GEANLKAQKADLEPLDTALWKEKMPK--DALSVWSRKQKALIEFV 202 Query: 227 ----CHTIMNCTQSCPKG 240 C C CP G Sbjct: 203 GDTPCFDCGECISVCPVG 220 >gi|16263114|ref|NP_435907.1| FixG iron sulfur membrane protein [Sinorhizobium meliloti 1021] gi|120197|sp|P18396|FIXG_RHIME RecName: Full=Nitrogen fixation protein fixG gi|49412|emb|CAA79905.1| FixG [Sinorhizobium meliloti] gi|14523775|gb|AAK65319.1| FixG iron sulfur membrane protein [Sinorhizobium meliloti 1021] Length = 524 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 11/85 (12%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + L + +R SR + + Sbjct: 221 YVFGGLMREQVCTYMCPWPRIQAAMLDENSL--VVTYNDWRGEPRSRHAKKAAAAGEV-- 276 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 277 ---VGDCVDCNACVAVCPMGIDIRD 298 >gi|332524244|ref|ZP_08400469.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] gi|332107578|gb|EGJ08802.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] Length = 463 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 7/81 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPF 222 G + C CP Y L+ +Y D R E +G R + Sbjct: 191 WGNAGTMREQVCKYMCP-YARFQSAMFDKDTLIISY----DPERGEPRGRRSKKTDPKQA 245 Query: 223 RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 246 GLGSCVDCGVCVQVCPTGIDI 266 >gi|313836443|gb|EFS74157.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL037PA2] gi|314929056|gb|EFS92887.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL044PA1] gi|314970997|gb|EFT15095.1| glycerol-3-phosphate dehydrogenase [NAD(P)+ ] C subunit [Propionibacterium acnes HL037PA3] gi|328906658|gb|EGG26433.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Propionibacterium sp. P08] Length = 416 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 L CV C C T CP Y GP D Sbjct: 15 RQSLDACVKCTICETMCPVAKATP-LYTGPKYNGPQGERYRDG-----------ASVDHS 62 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C+ CT CP+G+ IA++ + Sbjct: 63 LEWCNFCGICTLHCPQGV----KIAELNEQAAAK 92 >gi|298528318|ref|ZP_07015722.1| molybdopterin oxidoreductase [Desulfonatronospira thiodismutans ASO3-1] gi|298511970|gb|EFI35872.1| molybdopterin oxidoreductase [Desulfonatronospira thiodismutans ASO3-1] Length = 353 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 57/208 (27%), Gaps = 33/208 (15%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIKG 109 DL M + + N PT+ G C C + + G LA + + Sbjct: 13 DLPFQEGMTILDAARMHNIFIPTMCHLPGAPPTGACRLCVVEVQGARNLAASC-VTPAQR 71 Query: 110 AIAVYPLPHMSVI--------------KDLVVDMSH---FYSQHRSIEPWLKTVSPKPAK 152 + + V D ++ S Sbjct: 72 DMQINTESPRVVNSRRLNLQLLLAMGEHDCLLCPSSGQCVLQDLAYRYQINPKRFTPRGV 131 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + +CV+C C +C N+ + AYR + S+ G Sbjct: 132 LHRTEAVNPFILRDFSKCVLCGRCVQACCDIQVNN-------AISHAYRGIK-SKIAAAG 183 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +R P + C C Q+CP G Sbjct: 184 DR------PLKESDCVFCGECMQACPVG 205 >gi|220934170|ref|YP_002513069.1| NADH-quinone oxidoreductase, chain I [Thioalkalivibrio sp. HL-EbGR7] gi|219995480|gb|ACL72082.1| NADH-quinone oxidoreductase, chain I [Thioalkalivibrio sp. HL-EbGR7] Length = 163 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 31 RKITVQYPEEKTPMSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESEQRADGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L++C C ++CP Sbjct: 91 RRTTRYDID------------------LFKCIFCGFCEEACPVD 116 >gi|221068943|ref|ZP_03545048.1| FAD linked oxidase domain protein [Comamonas testosteroni KF-1] gi|220713966|gb|EED69334.1| FAD linked oxidase domain protein [Comamonas testosteroni KF-1] Length = 1305 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 835 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHWQEFEDV 894 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 895 --ADHCTVCHKCFNPCPVKIDFGDVTMNMRNLL 925 >gi|15920746|ref|NP_376415.1| hypothetical protein ST0529 [Sulfolobus tokodaii str. 7] gi|15621529|dbj|BAB65524.1| 758aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 758 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 23/86 (26%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C C +Y + P + R +++ +D Sbjct: 313 YNEATKCINCGLCLNVCKAYEVTHNPLYSPVG--KIGRLIMEEKDFE------------- 357 Query: 224 LYRCHTIMNC---TQSCPKGLNPAKA 246 T C + CP + +K Sbjct: 358 -----TCFGCVKDEEVCPVNIPISKL 378 >gi|145219648|ref|YP_001130357.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205812|gb|ABP36855.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeovibrioides DSM 265] Length = 337 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 28/107 (26%), Gaps = 21/107 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAY----RWLID 205 ++ E + C+ C C+ CP+ D Y G + + Sbjct: 216 PENFESHFWKEISERCIGCGTCTYLCPTCHCFDIQDEGDTYEGIRRKNWDSCSFKLFTMH 275 Query: 206 -----SRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKG 240 R + D F + C CT+ CP Sbjct: 276 TSGHNPRATQSARWRQRIMHKFNYFSDKFTVNSCTGCGRCTRECPVD 322 >gi|291612805|ref|YP_003522962.1| FAD linked oxidase domain protein [Sideroxydans lithotrophicus ES-1] gi|291582917|gb|ADE10575.1| FAD linked oxidase domain protein [Sideroxydans lithotrophicus ES-1] Length = 1284 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R D D Sbjct: 816 DCLRCGKCKPVCTTHVPRANLLYSPRNKILATSLLIEAFLYEEQTRRGVSIAHFDEFNDV 875 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ ++ L + Sbjct: 876 --ADHCTVCHKCLKPCPVDIDFGDVSVAMRNFLRKQG 910 >gi|254509395|ref|ZP_05121478.1| eleCtron transport complex, rnfabcdge type, c subunit [Vibrio parahaemolyticus 16] gi|219547669|gb|EED24711.1| eleCtron transport complex, rnfabcdge type, c subunit [Vibrio parahaemolyticus 16] Length = 840 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 18/101 (17%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 ++ L + ++ C+ C C+ CP+ ++L Q +W Sbjct: 353 PITKTANCILAPTRKEISPDHYEMACIRCGQCAEVCPA-----------SLLPQQLQWHA 401 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + E L+ L C C CP + + Sbjct: 402 KAEEFDKCEELN-------LKDCIECGACAFVCPSEIPLVQ 435 >gi|121605716|ref|YP_983045.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120594685|gb|ABM38124.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polaromonas naphthalenivorans CJ2] Length = 474 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 30/124 (24%), Gaps = 8/124 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC-----CSTS 179 L V + ++ P + G C Sbjct: 165 LAVALWTGFTFVGYFTPIKVLGMEFVQMSMSSWEAFWTFFYGFATYGNAGFMREQVCKHM 224 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP + S + +++ D R + + L C C Q CP Sbjct: 225 CPYARFQSAMFDKDTLIVTYDAERGDPRGARSRKADPAALN---LGSCVDCNLCVQVCPT 281 Query: 240 GLNP 243 G++ Sbjct: 282 GIDI 285 >gi|315186451|gb|EFU20211.1| electron transport complex, RnfABCDGE type, C subunit [Spirochaeta thermophila DSM 6578] Length = 444 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 20/101 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ CA C +CP + YL R R E R Sbjct: 359 EEVVRRPVEPCIRCAKCVQACP---MGLEPYL-------LERLSARERWEEAEAR----- 403 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM--MLLDRK 258 + C +C CP I K M+L +K Sbjct: 404 ---GVVDCVECGSCAYICPASRPLLDYIRYGKATVMMLRKK 441 >gi|159906055|ref|YP_001549717.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanococcus maripaludis C6] gi|159887548|gb|ABX02485.1| CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit [Methanococcus maripaludis C6] Length = 778 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 EC C C CP+ R ++D+ L L + + Sbjct: 403 AKECTECGWCVRVCPNN-----------------RPIMDAVTAAAKGDLTKLANLYEYDM 445 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+T C + C + L I K L+ + Sbjct: 446 CYTCGRCEEECERNLPLVSFITKAGDHLVKNQ 477 >gi|32266473|ref|NP_860505.1| hypothetical protein HH0974 [Helicobacter hepaticus ATCC 51449] gi|32262524|gb|AAP77571.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 436 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 26/94 (27%), Gaps = 6/94 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C C C Y N D P L E D Sbjct: 5 QQTASACVKCGKCIPHCTIYMVNRDEVTSPRGFLDLLGAYKRGDIELDSTSRDIF---ES 61 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C T C CP L AI +++ + + Sbjct: 62 CFLCTT---CVTHCPSSLPVDVAIESVRVDIAQK 92 >gi|14521076|ref|NP_126551.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus abyssi GE5] gi|5458293|emb|CAB49782.1| hydB-1 cytochrome-c3 hydrogenase, beta chain (EC 1.12.2.1) [Pyrococcus abyssi GE5] Length = 367 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 28/153 (18%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 +D+ +H + + L E + +C+ C C+T+CP Sbjct: 187 NEDICAFREFEKKRHEAFKY--HEDWGNLRYLLELEMEHPMWDEEAEKCLACGICNTTCP 244 Query: 182 S---YWWNSDRYLGPAILLQAYRWLIDS---------------RDEFQGERLD------N 217 + Y L + RW DS R + L+ + Sbjct: 245 TCRCYEVQDIVNLDGVTGYRERRW--DSCQFRSHGLVAGGHNFRPTKKSRFLNRYLCKNS 302 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + C CT CP G++ + + +I Sbjct: 303 YNEKLGISFCVGCGRCTAFCPAGISFVRNLRRI 335 >gi|298208769|ref|YP_003716948.1| FAD linked oxidase-like protein [Croceibacter atlanticus HTCC2559] gi|83848696|gb|EAP86565.1| FAD linked oxidase-like protein [Croceibacter atlanticus HTCC2559] Length = 967 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 9/118 (7%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS-------CPSYWWNSD 188 S ++ LL + + +C C TS CPSY D Sbjct: 528 MESALRYVPERKELQINTLLNFDDTGGILRLAEKCNGSGDCRTSVNSGGTMCPSYRATKD 587 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ + + + ++ E C + C CP ++ A Sbjct: 588 EKDSTRGRANTLREILTT--SNKVNKFNHTELKEVFDLCISCKGCKSECPSNVDVASL 643 >gi|255522756|ref|ZP_05389993.1| pduS type ferredoxin, putative [Listeria monocytogenes FSL J1-175] Length = 184 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 9/101 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++ + C+ C+ CS CP D + P +++ + D D + Sbjct: 12 EQIFNETKSACIQCSLCSDLCPRKQLGHD--IHPHKVMRHFAVAEDITDIKPDPIWEEAM 69 Query: 220 DPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL+P + +K LL + + Sbjct: 70 I------CCECGICEVIACPMGLSPRQVNIHVKKELLKQGV 104 >gi|239628853|ref|ZP_04671884.1| aldo/keto reductase [Clostridiales bacterium 1_7_47_FAA] gi|239518999|gb|EEQ58865.1| aldo/keto reductase [Clostridiales bacterium 1_7_47FAA] Length = 383 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 41/134 (30%), Gaps = 8/134 (5%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + ++ + ++ P++ + ++ + C C C Sbjct: 239 PGVKLVLSGMSSEEQLEDNIKTFSPFVPLSREEENI--IEQAAQAIRTRIKNGCTACRYC 296 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP+ + + + + D + + + E C C + Sbjct: 297 MP-CPAGVDIPGNF-----AIWNEKAMYDVEERARKAFKEKQEAGAGADLCIQCGKCEKV 350 Query: 237 CPKGLNPAKAIAKI 250 CP+G+ K +A + Sbjct: 351 CPQGIGIRKDLAAL 364 >gi|163746329|ref|ZP_02153687.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161380214|gb|EDQ04625.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 535 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 22/106 (20%), Gaps = 27/106 (25%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP + + +W + R + +R + Sbjct: 201 FIFGGFMREQVCIYMCPWPRIQGAMMDPGTLTVGYRKWRGEPRGKGGVKRQQAAAEAIGS 260 Query: 224 --------------------------LYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 261 GDAVARYGAALDKNSAGGRQSRSGEVLGDCIDCNACVAVCPMGIDI 306 >gi|224824815|ref|ZP_03697922.1| NADH-quinone oxidoreductase, chain I [Lutiella nitroferrum 2002] gi|224603308|gb|EEG09484.1| NADH-quinone oxidoreductase, chain I [Lutiella nitroferrum 2002] Length = 162 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L++ HF++ R I + H R+ +G C+ C C Sbjct: 15 ELVQGLMLTGRHFFA--RKITVQFPEEKTPLSPRFRGLHAQRRYANGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L +C C ++CP Sbjct: 73 CPAMAITIESEQRDDGTRRTSRYDID------------------LTKCIFCGFCEEACPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|149913158|ref|ZP_01901692.1| formate dehydrogenase, alpha subunit [Roseobacter sp. AzwK-3b] gi|149813564|gb|EDM73390.1| formate dehydrogenase, alpha subunit [Roseobacter sp. AzwK-3b] Length = 927 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 51/175 (29%), Gaps = 30/175 (17%) Query: 82 EGICGSCGMNIDGTNTLAC--------------VKDMKDIKGAIAVYPLPHMSVIKDLVV 127 +G C +C + ++G TL + + + L +D+ Sbjct: 47 DGNCRACMVEVEGERTLVASCIREVAEGMVVKTDTARAETSRKMVMELLLADQPEQDVSH 106 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWW 185 D S + + PK KE + +D L C+ C C +C Sbjct: 107 DKSSHLWDMARLNGVETSRFPKLEKERIPLLDDSHVAMRVNLDACIQCNLCVRACRDVQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N +G A + D DP C C Q+CP G Sbjct: 167 ND--VIGMAGRGHDAYPVFD------------FADPMGESTCVACGECVQACPTG 207 >gi|332307904|ref|YP_004435755.1| cytochrome c oxidase accessory protein CcoG [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175233|gb|AEE24487.1| cytochrome c oxidase accessory protein CcoG [Glaciecola agarilytica 4H-3-7+YE-5] Length = 475 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 19/86 (22%), Gaps = 6/86 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C+ CP D+ A R Sbjct: 210 AVCTYGNAAYMREIMCTHICPYARFQSAMFDKDTFTVAYDAARGEQRGPRPRKATR---E 266 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 267 QNAAKGLGDCIDCNLCVQVCPTGIDI 292 >gi|94263958|ref|ZP_01287760.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93455630|gb|EAT05812.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 713 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 19/92 (20%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ C Y P + A+ D + Sbjct: 316 ASHCTRCGACAARC----AFLQEYGLPGDIAAAWAAGSGKVDP---------------FA 356 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP+ L P + +++ Sbjct: 357 CSLCNLCAAVCPEQLEPGNFLLQLRRRAATAA 388 >gi|332883529|gb|EGK03812.1| hypothetical protein HMPREF9456_01879 [Dysgonomonas mossii DSM 22836] Length = 430 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 18/87 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP P + YR ++ NLE + + C Sbjct: 354 SNCISCGYCVDVCPMRLM-------PMKFEENYR----------KKKYFNLE-KYNISSC 395 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C CP + ++I + K+ L Sbjct: 396 IECAACEYICPSNVPLIESIKEGKVKL 422 >gi|320352434|ref|YP_004193773.1| putative sulfite reductase-associated electron transfer protein DsrK [Desulfobulbus propionicus DSM 2032] gi|320120936|gb|ADW16482.1| putative sulfite reductase-associated electron transfer protein DsrK [Desulfobulbus propionicus DSM 2032] Length = 543 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C + D P + + R + I R Sbjct: 96 RSLKIFMDCCVRCGACADKCHFFLGTGDPKNMPVLRAELLRSIYRQNFTRAGKILGRLAG 155 Query: 211 QGERLDNLEDPFRLYR--CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E + + +Y C C+ CP G++ A+ ++ +L Sbjct: 156 GREMTVGVLKEWFMYAYQCTECRRCSVFCPYGIDTAEITMMLRELL 201 >gi|317488478|ref|ZP_07947029.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912410|gb|EFV33968.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 374 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 33/143 (23%), Gaps = 9/143 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP + + + + + + + C C Sbjct: 239 LPGVLTVLSGMSTPDQVSENTQIMRSFHPLTHEEDEALARVR--AILDGVSTVPCTDCRY 296 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP R L D E D C C Sbjct: 297 CLKNCP----KGVRIPAALASLNILELFHDMH--RAQENYDWNASSGPASTCVGCGACES 350 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 CP+ + K + + L ++K Sbjct: 351 VCPQHIEIVKELGRA-AELFEKK 372 >gi|269964101|ref|ZP_06178403.1| hypothetical protein VME_47870 [Vibrio harveyi 1DA3] gi|269831160|gb|EEZ85317.1| hypothetical protein VME_47870 [Vibrio harveyi 1DA3] Length = 342 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 31/206 (15%) Query: 74 LTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV---YPLPHMSVIKDLVVDMS 130 + + S C M + T+ A + + + P+ S KD V+ S Sbjct: 131 VLIECSESFENCFCVSMGTNKTDNFAASVQFSEHGAIVTIKDPELAPYFSQGKD--VEHS 188 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ-KIDGLYECVMCACCSTSCPSYW----- 184 + + ++ ++ + + C+ C C++SCP+ Sbjct: 189 VSFVKSNPVKVRTPDSVCDDPTKIREVLLSHPVWSEYDSRCIGCGRCTSSCPTCACFNVF 248 Query: 185 ---WNSDRYLGPAILLQAYRWLI--------DSRDEFQGERL-----DNLED----PFRL 224 +N + +G A + S GERL + D Sbjct: 249 DVVYNQEAKVGERRRQHASCMIDGFSDMAGGHSFRHKTGERLRYRALHKVNDFKSRQGEH 308 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C CP ++ + I K+ Sbjct: 309 HMCVGCGRCDDRCPHYISFSNIINKM 334 >gi|257790811|ref|YP_003181417.1| aldo/keto reductase [Eggerthella lenta DSM 2243] gi|257474708|gb|ACV55028.1| aldo/keto reductase [Eggerthella lenta DSM 2243] Length = 374 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 33/143 (23%), Gaps = 9/143 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP + + + + + + + C C Sbjct: 239 LPGVLTVLSGMSTPDQVRDNTQIMRSFHPLAHEEDEALARVR--AILDGVPTVPCTDCRY 296 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP R L D E D C C Sbjct: 297 CLKNCP----KGVRIPAALASLNILELFHDMH--RAQENYDWNASSGPASTCVGCGACES 350 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 CP+ + K + + L ++K Sbjct: 351 VCPQHIEIVKELGRA-AELFEKK 372 >gi|160903100|ref|YP_001568681.1| aldo/keto reductase [Petrotoga mobilis SJ95] gi|160360744|gb|ABX32358.1| aldo/keto reductase [Petrotoga mobilis SJ95] Length = 370 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 60/230 (26%), Gaps = 36/230 (15%) Query: 45 MDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 + T +D+ G LD + + RS GI G A Sbjct: 156 IKTIDLDVVMTGFNYLDIFN-FPSTYQEVIPFARSKNMGIVGMKAF--------ADGYLY 206 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 + A+ + V+ + E + ++ E Sbjct: 207 RSTYDALNYALTQDLDVMVVGANSEDMLRRDIQIAENFKPLPKKSVENLYYRAPE----- 261 Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR---DEFQGERLD----N 217 G Y C C C CP + + R D ERL N Sbjct: 262 LGNYVCRQCGKCLP-CPEDIEIMKVFEYEGWYDRQIR-DYQPHEAPDYALRERLAFWFGN 319 Query: 218 LEDPFRLYR--------CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + Y C C + CP + I K+K L+D K+ Sbjct: 320 QNEAKMAYSKLNKTFKDCTECGICEERCPYDIPI---IRKLK--LVDYKL 364 >gi|118443355|ref|YP_877927.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium novyi NT] gi|118133811|gb|ABK60855.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium novyi NT] Length = 1168 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 4/85 (4%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP + + +GE+L + Sbjct: 681 PEWSMENCIQCNQCSYVCPHAVIRPTLLTEEEYNNKPEGFKAVEAKGIKGEKLYYAMNV- 739 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 + C NC + CP P KA+ Sbjct: 740 SVLDCTGCGNCAEVCPA---PTKAL 761 >gi|325678152|ref|ZP_08157782.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus albus 8] gi|324110157|gb|EGC04343.1| electron transport complex, RnfABCDGE type, C subunit [Ruminococcus albus 8] Length = 421 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 23/93 (24%) Query: 168 YECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C C+ +CP+ ++ + + R D Sbjct: 345 TNCIRCGRCAKACPAGLMPMRIEKAVKKRKRTELRRLRPD-------------------- 384 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C +CT CP A+ K K +LDRK Sbjct: 385 LCIGCGSCTYVCPAKRELKDAVDKAK-TILDRK 416 Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 6/73 (8%) Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA--- 244 D L A + + L + C C ++CP GL P Sbjct: 311 DPELPLGKCDSAALIFMKPLESGGKGSLKVVGGQT---NCIRCGRCAKACPAGLMPMRIE 367 Query: 245 KAIAKIKMMLLDR 257 KA+ K K L R Sbjct: 368 KAVKKRKRTELRR 380 >gi|71280819|ref|YP_267040.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] gi|71146559|gb|AAZ27032.1| iron-sulfur cluster-binding protein [Colwellia psychrerythraea 34H] Length = 460 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 24/76 (31%), Gaps = 7/76 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF--RLYRCHTIMNC 233 C CP Y LL AY R E + R +DP L C C Sbjct: 213 CIHLCP-YSRFQSAMFDKNTLLVAYDAE---RGENRAPRKRK-DDPKALGLGDCVDCNLC 267 Query: 234 TQSCPKGLNPAKAIAK 249 CP G++ I Sbjct: 268 VDVCPAGIDIRNGIQY 283 >gi|13540834|ref|NP_110522.1| ferredoxin subunit of sulfhydrogenase II [Thermoplasma volcanium GSS1] gi|14324217|dbj|BAB59145.1| cytochrome c3 hydrogenase [sulfhydrogenase] beta subunit [Thermoplasma volcanium GSS1] Length = 306 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 26/103 (25%), Gaps = 16/103 (15%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS---------RDEFQGE 213 C+ C C+ SCP+ + + +++ R E Sbjct: 199 WNKFANYCISCGACNYSCPTCYCVDVYDDDDGRKKEWDSCILEGFTRTAAGNVRPELSER 258 Query: 214 RLDNLEDPF-------RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 F Y C C CP ++ + I Sbjct: 259 LRQRFYHKFKYYKLSRGAYLCTGCNRCVDDCPVDIDIKEVITH 301 >gi|83748674|ref|ZP_00945691.1| Iron-Sulfur 4Fe-4S Ferredoxin [Ralstonia solanacearum UW551] gi|207743371|ref|YP_002259763.1| iron-sulfur 4fe-4s ferredoxin protein [Ralstonia solanacearum IPO1609] gi|83724636|gb|EAP71797.1| Iron-Sulfur 4Fe-4S Ferredoxin [Ralstonia solanacearum UW551] gi|206594768|emb|CAQ61695.1| iron-sulfur 4fe-4s ferredoxin protein [Ralstonia solanacearum IPO1609] Length = 487 Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 31/110 (28%), Gaps = 16/110 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 E W ++ P +L G + C CP S + D Y+ Sbjct: 194 AEVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT 250 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + SR E R L C C Q CP G++ Sbjct: 251 YDTERGEPRGSRSRSEDFAAR--------GLGACVDCSICVQVCPTGIDI 292 >gi|326391175|ref|ZP_08212720.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter ethanolicus JW 200] gi|325992808|gb|EGD51255.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter ethanolicus JW 200] Length = 1170 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 24/94 (25%), Gaps = 20/94 (21%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP +L ++ + Sbjct: 681 PEWQIDNCIQCNQCSYVCP--HAVIRPFLLTEEEMKKA-------PPTFKLKKAIGRGLE 731 Query: 223 RLY--------RCHTIMNCTQSCPKGLNPAKAIA 248 L+ C NC CP P KA+ Sbjct: 732 GLWYRIQVSPLDCTGCGNCADVCPA---PTKALI 762 >gi|300691730|ref|YP_003752725.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum PSI07] gi|299078790|emb|CBJ51450.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum PSI07] Length = 487 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 31/109 (28%), Gaps = 16/109 (14%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-----DRYLGPA 194 E W ++ P +L G + C CP + D Y+ Sbjct: 195 EVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQGVMVDCDTYVVTY 251 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + SR+E R L C C Q CP G++ Sbjct: 252 DTQRGEPRGGRSRNEDFAAR--------GLGACVDCSICVQVCPTGIDI 292 >gi|258592355|emb|CBE68664.1| NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I) [NC10 bacterium 'Dutch sediment'] Length = 153 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 14/119 (11%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + H + + + A H DG+ CV C C+ + Sbjct: 4 EILKGMATTFKHIFR--KPVTVSYPEERLPLAPRYRGLHMLVVGDDGMERCVGCELCAVA 61 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ AI ++A R +GER + L RC C ++CP Sbjct: 62 CPAD----------AIYVEAAENTGQER-HSKGERYAKVYKIHML-RCIFCGYCEEACP 108 >gi|291278902|ref|YP_003495737.1| electron transport complex protein RnfC [Deferribacter desulfuricans SSM1] gi|290753604|dbj|BAI79981.1| electron transport complex protein RnfC [Deferribacter desulfuricans SSM1] Length = 435 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 18/90 (20%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 ++ C+ C C +CP L PAI+ Q + ERL + + + Sbjct: 353 NMHNCIRCGRCVEACPM-------GLVPAIMEQFALNEMY-------ERL----NEWHVL 394 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C C+ CP K ++ Sbjct: 395 NCIECGCCSYVCPSRRPLVGYFKTAKREIM 424 >gi|124022345|ref|YP_001016652.1| aldo/keto reductase [Prochlorococcus marinus str. MIT 9303] gi|123962631|gb|ABM77387.1| Aldo/keto reductase family protein [Prochlorococcus marinus str. MIT 9303] Length = 378 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 37/130 (28%), Gaps = 16/130 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +Q + + L + +L Q E R + +C C C S P R L Sbjct: 252 AQLANADGPLNQREQRALNQLRQQGERRLGENRCGQCKACLPCPNSVPIPDLLRLRNLAV 311 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCPKGLNPAKAI 247 LQA+ ER + + + C C CP L + Sbjct: 312 GHNLQAF----------TEERYNLIGRAGHWWEGIDGSACERCGECLPRCPHHLPIPDLL 361 Query: 248 AKIKMMLLDR 257 A L Sbjct: 362 ADTHQRLAAA 371 >gi|134045341|ref|YP_001096827.1| formate dehydrogenase subunit beta (F420) [Methanococcus maripaludis C5] gi|132662966|gb|ABO34612.1| formate dehydrogenase, beta subunit (F420) [Methanococcus maripaludis C5] Length = 387 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 21/101 (20%), Gaps = 8/101 (7%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 K + + +C+ C C CP +L Sbjct: 262 EDYKNKWLEEEYPTIEEWNRQWNKCIKCYGCRDVCPVC--------FCRECALNADYLDS 313 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + C C CP + A+ Sbjct: 314 GSIPPNPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARI 354 >gi|317497311|ref|ZP_07955634.1| electron transport complex [Lachnospiraceae bacterium 5_1_63FAA] gi|316895380|gb|EFV17539.1| electron transport complex [Lachnospiraceae bacterium 5_1_63FAA] Length = 438 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K L +D + C+ C C + CP PA L D Sbjct: 344 KTFSCFLAFTKDEVAANQPSNCIRCGRCVSVCPQKLM-------PAKLSVLA-------D 389 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Q + + L C +C+ CP N A+++ + +L + Sbjct: 390 HNQFDEFEKLYGAE----CVECGSCSFICPAKRNLAQSMKTGRKQVLANR 435 >gi|300704345|ref|YP_003745948.1| iron-sulfur 4fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299072009|emb|CBJ43339.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 487 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 31/110 (28%), Gaps = 16/110 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 E W ++ P +L G + C CP S + D Y+ Sbjct: 194 AEVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT 250 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + SR E R L C C Q CP G++ Sbjct: 251 YDAQRGEPRGSRSRSEDFAAR--------GLGACVDCSICVQVCPTGIDI 292 >gi|290968408|ref|ZP_06559948.1| putative iron-sulfur cluster-binding protein [Megasphaera genomosp. type_1 str. 28L] gi|290781595|gb|EFD94183.1| putative iron-sulfur cluster-binding protein [Megasphaera genomosp. type_1 str. 28L] Length = 720 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 6/103 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + + CV CA C CP++ G +I L+ S ER Sbjct: 299 RRKIMESEDYKDMACCVRCAACLNVCPAFRLVGGHVYGGSIYTGGIGTLLTS-FLNNRER 357 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++++ C C C L+ A I K++ Sbjct: 358 GKDIQNI-----CLQCGTCNTVCGGKLDVAGMILKLRTKFAQE 395 >gi|288940989|ref|YP_003443229.1| DsrK protein [Allochromatium vinosum DSM 180] gi|288896361|gb|ADC62197.1| DsrK [Allochromatium vinosum DSM 180] Length = 524 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C + D P R + + + Sbjct: 67 RSLRVYMDACVKCGACTDKCHYFLGTGDPKNMPVARQDLMRKVYRRYFTLSGKLFPKLVG 126 Query: 211 QGERLDNLEDPFR--LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + + D + ++C C+ CP G++ A+ + ++ Sbjct: 127 AEDFTEEVLDDWYSYFHQCSQCRRCSVFCPYGIDTAEISMAAREIM 172 >gi|291287819|ref|YP_003504635.1| electron transport complex, RnfABCDGE type, C subunit [Denitrovibrio acetiphilus DSM 12809] gi|290884979|gb|ADD68679.1| electron transport complex, RnfABCDGE type, C subunit [Denitrovibrio acetiphilus DSM 12809] Length = 436 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ Y+C+ C C +CP L P+ + R+++ E Sbjct: 342 LVYRDEDMPDLTQYKCMRCGRCIEACPM-------GLVPSAMD---RFVV-------KEM 384 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPK 239 ++L D + C C+ CP Sbjct: 385 YESLADWH-VMNCIECGCCSYVCPS 408 >gi|147919469|ref|YP_686791.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] gi|110622187|emb|CAJ37465.1| formate dehydrogenase, beta subunit [uncultured methanogenic archaeon RC-I] Length = 347 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 16/110 (14%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLI 204 + + L + + +C+ C C CP + Y G L A+ + I Sbjct: 247 HQAEQFSLNNADIDYWAREFSKCIKCQGCILYCPVAFEAKLKTPHYEGKGRLPPAFSYHI 306 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + C C CP + +K ++ L Sbjct: 307 -----AKAAAVGQ--------NCVNCGCCDDVCPVDIPISKLYHDVQKRL 343 >gi|62184296|gb|AAC35401.2| DsrK [Allochromatium vinosum DSM 180] Length = 524 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C + D P R + + + Sbjct: 67 RSLRVYMDACVKCGACTDKCHYFLGTGDPKNMPVARQDLMRKVYRRYFTLSGKLFPKLVG 126 Query: 211 QGERLDNLEDPFR--LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + + D + ++C C+ CP G++ A+ + ++ Sbjct: 127 AEDFTEEVLDDWYSYFHQCSQCRRCSVFCPYGIDTAEISMAAREIM 172 >gi|332703408|ref|ZP_08423496.1| FAD linked oxidase domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332553557|gb|EGJ50601.1| FAD linked oxidase domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 1187 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 16/99 (16%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPA---------ILLQAYRWLIDSRDEFQ-GERLDNLE 219 C C C CP Y+ P + Y + + R E + + L L Sbjct: 728 CTRCGKCKQVCPMYYPEKGLLYHPRNKNMTIGALVEAVYYSQMHEGRPEQRLLDSLRRLT 787 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C CP +N A ++ L ++K Sbjct: 788 E-----HCTACGRCAS-CPVKINSADVTLFMRAFLDEKK 820 >gi|312138948|ref|YP_004006284.1| ferredoxin [Rhodococcus equi 103S] gi|311888287|emb|CBH47599.1| putative ferredoxin [Rhodococcus equi 103S] Length = 377 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 30/112 (26%), Gaps = 22/112 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRW-----LIDS 206 + ++ D C+ C C+ CP+ LG + RW L S Sbjct: 244 RAARDEPVWDDVADRCLTCGNCTMVCPTCFCTTAEDVSELGGEGTERRQRWASCFELDYS 303 Query: 207 RDEFQGER--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R L D F C C CP G++ Sbjct: 304 HLHGGNVRTSGAARYRQWMTHKLGTWFDQFGSSGCVGCGRCIDWCPVGIDIT 355 >gi|269103785|ref|ZP_06156482.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Photobacterium damselae subsp. damselae CIP 102761] gi|268163683|gb|EEZ42179.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Photobacterium damselae subsp. damselae CIP 102761] Length = 445 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 5/88 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLEDP 221 + C CP + S + ++ + + R + + L Sbjct: 185 CTYLNAGWLRATVCLHMCPYARFQSAMFDKDTYIVAYHNDRAEPRGPRSRKQDPKQL--- 241 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 242 -GLGDCIDCNLCVQVCPTGIDIRDGLQY 268 >gi|315185458|gb|EFU19229.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Spirochaeta thermophila DSM 6578] Length = 597 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 28/172 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIK-----------DLVVDMSH 131 GICG C + ++G +C+ +++ + P+ + K D + + H Sbjct: 50 GICGICLVKVNGEYVRSCITRVQEGMEVVTSDPVIRETRRKILELILATHPDDCLKCIKH 109 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI---DGLYECVMCACCSTSCPSYWWNSD 188 + + + L+ S K DR + +C+ C C C + Sbjct: 110 GKCELQDLAERLEVRSIPYDKYERGLPVDRTSPSIVRDMNKCIGCGRCIEVCHNVQSVGA 169 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + C C CP G Sbjct: 170 IFFHHRGSHTI--------------VANAAGQTMGTSVCVACGQCVVYCPVG 207 >gi|307726699|ref|YP_003909912.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1003] gi|307587224|gb|ADN60621.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1003] Length = 1006 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G L + + Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLAISGQLGEAG--LASDDVKE 653 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + + R Sbjct: 654 TLDLCVSCKGCKRDCPTGVDMAKFKIEARAARVKR 688 >gi|302875667|ref|YP_003844300.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridium cellulovorans 743B] gi|307688105|ref|ZP_07630551.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridium cellulovorans 743B] gi|302578524|gb|ADL52536.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridium cellulovorans 743B] Length = 1179 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 8/90 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C+ C C+ CP +++ + ++ + G L+ + Sbjct: 680 MLPQWQIDKCIQCGQCAFVCP--HATIRQFVLDKGEQEKAPATFATK-KATGRGLEEYQY 736 Query: 221 PFRL--YRCHTIMNCTQSCPKGLNPAKAIA 248 ++ C NC CP P KAI Sbjct: 737 RIQIAPMDCTGCGNCADVCPA---PGKAII 763 >gi|224368394|ref|YP_002602557.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691110|gb|ACN14393.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] Length = 636 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 18/184 (9%) Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 T + G+ + ++ + L+ +K M +I + L + + L++ Sbjct: 169 TFYWVSQLGMLPGTAIFVNAGSQLSQIKSMDNIVSPGFLVSL-ALLGLFPLIIKKIITRY 227 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + + LK L + ++ C C C C + Sbjct: 228 RSHTHKNALKIPETGNITVELPASLQKEIETMANACTNCGACKRKCAFLQEHGTP----- 282 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + ++++ D + E L + C C CP+ L+P K ++ Sbjct: 283 ------KEILETVDFTKPENLALA------FECSLCNLCGAICPENLDPRKLFFTLRQQA 330 Query: 255 LDRK 258 + Sbjct: 331 IKAG 334 >gi|227822339|ref|YP_002826310.1| nitrogen fixation protein FixG [Sinorhizobium fredii NGR234] gi|227341339|gb|ACP25557.1| nitrogen fixation protein FixG [Sinorhizobium fredii NGR234] Length = 523 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 34/163 (20%), Gaps = 14/163 (8%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M ++ + K AI + VI FY Sbjct: 149 DRNARMRLNAGPWTLDKFSKRIAKHAIWL-------VIGVATGGAWIFYFADAPSLLRSF 201 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRW 202 P + C+ CP + +R Sbjct: 202 VTFEAPPVAYFTVAILTATTYVFGGLMREQVCTYMCPWPRIQATMLDENSLVVTYNDWRG 261 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 SR + + + C C CP G++ Sbjct: 262 EPRSRHAKKAAAAGEV-----VGDCVDCNACVAVCPMGIDIRD 299 >gi|289207901|ref|YP_003459967.1| NADH-quinone oxidoreductase, chain I [Thioalkalivibrio sp. K90mix] gi|288943532|gb|ADC71231.1| NADH-quinone oxidoreductase, chain I [Thioalkalivibrio sp. K90mix] Length = 162 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP A Sbjct: 37 PDEKTPMSPRFRGLHALRRYPNGEERCIACKLCEAVCP-----------------ALAIT 79 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 IDS + G R D L++C C ++CP Sbjct: 80 IDSEERADGTRRTTRYDID-LFKCIFCGFCEEACPVD 115 >gi|220904812|ref|YP_002480124.1| molybdopterin oxidoreductase Fe4S4 region [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869111|gb|ACL49446.1| molybdopterin oxidoreductase Fe4S4 region [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 374 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 25/94 (26%), Gaps = 20/94 (21%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRWLIDS 206 ++ CV C C++ C + N G +A+ ++D Sbjct: 149 PEPGSFPLDNDHPMITRDFSRCVQCGRCASVCSAVQVNDAIPPQFGRRAEKEAWWPVVD- 207 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RC C Q CP G Sbjct: 208 -----------------YQRCTHCGECVQVCPTG 224 >gi|308270429|emb|CBX27041.1| hypothetical protein N47_A10700 [uncultured Desulfobacterium sp.] Length = 177 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 12/34 (35%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C C CP +NP +++ + Sbjct: 69 FECSLCGLCAAVCPVNVNPVSMFLEMRREAARQG 102 >gi|238753581|ref|ZP_04614943.1| Pyruvate-flavodoxin oxidoreductase [Yersinia ruckeri ATCC 29473] gi|238708133|gb|EEQ00489.1| Pyruvate-flavodoxin oxidoreductase [Yersinia ruckeri ATCC 29473] Length = 1176 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 14/117 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDS 206 + ++ + I C C C +CP + + + P+ + A + + + Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVPPSAMTDAPASLHALDVKA 728 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM-----LLDRK 258 RD + + + C C + CP AI I M L++ K Sbjct: 729 RDMRGQKYVLQVAPED----CTGCNLCYEVCPAKDRQNPAIKAINMQPRLAHLVEEK 781 >gi|149203818|ref|ZP_01880787.1| NAD-dependent formate dehydrogenase, alpha subunit [Roseovarius sp. TM1035] gi|149142935|gb|EDM30977.1| NAD-dependent formate dehydrogenase, alpha subunit [Roseovarius sp. TM1035] Length = 964 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 13/96 (13%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 T + L + + +C++C C +C + G L R Sbjct: 158 RNTSGEANPEWLPKDDSNPYFSYDPSKCIVCNRCVRAC-------EEVQGTFALTIQGR- 209 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR N +D F C + C Q+CP Sbjct: 210 GFDSRVSA-----GNADDDFLASDCVSCGACVQACP 240 >gi|153869101|ref|ZP_01998789.1| FixG-related protein [Beggiatoa sp. PS] gi|152074338|gb|EDN71202.1| FixG-related protein [Beggiatoa sp. PS] Length = 349 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 G + C CP Y ++ AY + R E +G R + + Sbjct: 201 AFATYGNAGWMREQVCIYMCP-YARFQSAMFDKNTMIIAY---DEKRGEPRGSRKRDTDY 256 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 257 KAQGLGDCINCTMCVQVCPTGIDI 280 >gi|146299885|ref|YP_001194476.1| D-lactate dehydrogenase (cytochrome) [Flavobacterium johnsoniae UW101] gi|146154303|gb|ABQ05157.1| D-lactate dehydrogenase (cytochrome) [Flavobacterium johnsoniae UW101] Length = 968 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 13/137 (9%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P+ + +V+ HR + + K + + +C C Sbjct: 515 PNSVLNIGKIVNALKMDENHRVVSGRV----EPDIKTFQDFSDSLGILRAAEKCNGSGDC 570 Query: 177 S-------TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CPSY + A R + ++ L + F L C + Sbjct: 571 RKMPSAGGAMCPSYRATRNEKETTRARANALREYLTYSEKENKFDQKELYEVFEL--CVS 628 Query: 230 IMNCTQSCPKGLNPAKA 246 C CP ++ A Sbjct: 629 CKACASECPSNVDVATL 645 >gi|332298653|ref|YP_004440575.1| ferredoxin [Treponema brennaborense DSM 12168] gi|332181756|gb|AEE17444.1| ferredoxin [Treponema brennaborense DSM 12168] Length = 224 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 42/178 (23%) Query: 78 RSCREGICGSCGM--NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 CR G CG+C I G N L + V D+ V F+ Sbjct: 37 CGCRNGFCGACATIYRIKGKNELHACLACQT-------------QVEADMYVATLPFFPL 83 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + K + L +Y C+ C C+ +C + N +Y+ Sbjct: 84 VKQVYDIEKIKPEQSVMMQL--------YPEIYSCIGCNACTKAC-TQGLNVMQYV---- 130 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 +R + + + C C+ CP G++ + + + Sbjct: 131 --------------AYAQRGEFEKCAEESFDCVMCGVCSSRCPAGISHPQVGLLARRL 174 >gi|255654583|ref|ZP_05399992.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-23m63] gi|296449357|ref|ZP_06891139.1| probable iron-sulfur cluster protein [Clostridium difficile NAP08] gi|296880709|ref|ZP_06904661.1| probable iron-sulfur cluster protein [Clostridium difficile NAP07] gi|296261827|gb|EFH08640.1| probable iron-sulfur cluster protein [Clostridium difficile NAP08] gi|296428282|gb|EFH14177.1| probable iron-sulfur cluster protein [Clostridium difficile NAP07] Length = 304 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP + + P L ++ + + E L+ +++ C Sbjct: 178 CFKCGKCVKYCPGNAILGNYDMNPKKCL---SYITQKKGDLSQEEKAVLKSGKKVFGCDI 234 Query: 230 IMNCTQSCPKGLN-PAKAIAKIKMMLLD 256 C + CP + P I + K ++D Sbjct: 235 ---CQEVCPHNVEIPTTHILEFKENIID 259 >gi|56478354|ref|YP_159943.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Aromatoleum aromaticum EbN1] gi|56314397|emb|CAI09042.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Aromatoleum aromaticum EbN1] Length = 477 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 23/82 (28%), Gaps = 5/82 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DP 221 + C CP Y L+ Y R E +G R + Sbjct: 210 FTYLFAGVMREQVCKYMCP-YARFQSVMFDADTLVITY---DQERGEPRGSRRKGVAPRS 265 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 266 SGLGDCVDCGICVQVCPTGIDI 287 >gi|16081547|ref|NP_393903.1| formate dehydrogenase related protein [Thermoplasma acidophilum DSM 1728] gi|10639595|emb|CAC11567.1| formate dehydrogenase related protein [Thermoplasma acidophilum] Length = 996 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 17/164 (10%) Query: 80 CREGICGSCGMNI-DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 I SC + + N + +KD++ L + ++ + + + H + Sbjct: 72 ADGKIVRSCATQVHENMNVVYSEDRVKDLRKEAVQRILANHNLYCTVCDNNNGDCELHNA 131 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + P +D +C++C C +C N ++ ++ Sbjct: 132 VLDLKIDKQKYPFSRKPYDVDDSNPFYVYDPSQCILCGRCVEACQDVQVNETLHIDWSLE 191 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R + D + C + +C CP Sbjct: 192 RP--RVVWDDGSKINES------------SCVSCGHCVTVCPVN 221 >gi|325831911|ref|ZP_08165008.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325486232|gb|EGC88684.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 374 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 32/143 (22%), Gaps = 9/143 (6%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 LP + + + + + + + C C Sbjct: 239 LPGVLTVLSGMSTPDQVSENTQIMRSFHPLTHEEDEALARVR--AILDGVPTVPCTDCRY 296 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP R L D E D C C Sbjct: 297 CLKNCP----KGVRIPAALASLNILELFHDMH--RAQENYDWNASSGPASTCVGCGACES 350 Query: 236 SCPKGLNPAKAIAKIKMMLLDRK 258 CP+ + K + + L + K Sbjct: 351 VCPQHIEIVKELGRA-AELFEEK 372 >gi|315925372|ref|ZP_07921583.1| propanediol utilization protein PduS [Pseudoramibacter alactolyticus ATCC 23263] gi|315621273|gb|EFV01243.1| propanediol utilization protein PduS [Pseudoramibacter alactolyticus ATCC 23263] Length = 456 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 8/107 (7%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 Q + K + C+ C C+ CP R ++ A++ + D Sbjct: 239 HRQLSIRQMKRQAMAACIQCRMCTDLCP-RQLIGHRVTPHRVMRNAFKEAALTADA---- 293 Query: 214 RLDNLEDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 D L + C C +CP GL+P + K L +RK+ Sbjct: 294 --DYLSAYGSVVNCCGCGVCEMFACPMGLSPKRINDYFKGQLRERKL 338 >gi|284167132|ref|YP_003405410.1| hypothetical protein Htur_3879 [Haloterrigena turkmenica DSM 5511] gi|284016787|gb|ADB62737.1| protein of unknown function DUF162 [Haloterrigena turkmenica DSM 5511] Length = 741 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 11/91 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQG 212 + ED Q + LY C+ C CS SC ++ G A W + Sbjct: 307 MDMREDDQLRETLY-CIRCGACSNSCANFQSVGGHAFGGETYSGGIATGWEAGVHGQESA 365 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + ++L C C CP ++ Sbjct: 366 DEFNDL--------CTGCSRCVNQCPVKIDI 388 >gi|188585339|ref|YP_001916884.1| formate dehydrogenase, alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350026|gb|ACB84296.1| formate dehydrogenase, alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 900 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 50/205 (24%), Gaps = 32/205 (15%) Query: 53 DNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTL--ACVKDMKD--- 106 G +L+ L PTL G C C + I G L AC + D Sbjct: 22 TEPGESILNALER-HGFHIPTLCYEEGLPIIGACRLCVVEISGARKLHPACSTPVADGMN 80 Query: 107 ------IKGAIAVYPLPHMSVIKDLVV--DMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 L + DL + + + K + Sbjct: 81 IFTESEQVVEARREILKLLLANHDLRCLTCERNADCRLQDYCYRYKVEDTPYVGDTKNYP 140 Query: 159 EDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 DR + C+MC C + C Y ++ D Sbjct: 141 IDRSNPFFFRDYGKCIMCGKCVSICAEIN-----------GAYVYDFMDRGFDSK---VT 186 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 +D + C C CP G Sbjct: 187 SAFDDELQNTTCTFCGMCVNVCPVG 211 >gi|332981477|ref|YP_004462918.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mahella australiensis 50-1 BON] gi|332699155|gb|AEE96096.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mahella australiensis 50-1 BON] Length = 343 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 14/130 (10%), Positives = 29/130 (22%), Gaps = 21/130 (16%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + E + C+ C C+ C + ++ Y Sbjct: 201 MMPPEFDLADLPDEKTFFEAPLWDEAYQRCIGCGTCTYVCSTCHCFEFYDERTKGAVKRY 260 Query: 201 R--------------WLIDSRDEFQGERLDNLEDPF-------RLYRCHTIMNCTQSCPK 239 R + R + F + C C + CP Sbjct: 261 RDWDSCMYALFTEHTSGHNPRPTQKERVRQRFMHKFCYYPINFGVVSCVGCGRCVRQCPT 320 Query: 240 GLNPAKAIAK 249 ++ + I + Sbjct: 321 NVDIRRIIKQ 330 >gi|332159308|ref|YP_004424587.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus sp. NA2] gi|331034771|gb|AEC52583.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Pyrococcus sp. NA2] Length = 367 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 29/118 (24%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDS-------- 206 E + +C+ C C+T+CP+ Y L + RW DS Sbjct: 221 MEHPLWDEEADKCLACGICNTTCPTCRCYEVQDIVNLDGMTGYRERRW--DSCQFRSHGL 278 Query: 207 -------RDEFQGERLD------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L+ + + L C CT CP G++ I ++ Sbjct: 279 VAGGHNFRPTKKARFLNRYLCKNSYNEKLGLSFCVGCGRCTAFCPAGIS---FIRNLR 333 >gi|330828686|ref|YP_004391638.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Aeromonas veronii B565] gi|328803822|gb|AEB49021.1| Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Aeromonas veronii B565] Length = 1181 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQAYRWLIDSRD 208 ++ I C C C +CP + + + P A + SRD Sbjct: 677 WEKRNIAKEIPIWEAELCTQCNYCVAACP-HSAIRAKVVEPDALAAAPATLDALDVKSRD 735 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 736 MRGQQYVLQVAPED----CTGCNLCVEVCPAK 763 >gi|255994383|ref|ZP_05427518.1| Na(+)-translocating NADH-quinone reductase, A subunit [Eubacterium saphenum ATCC 49989] gi|255993096|gb|EEU03185.1| Na(+)-translocating NADH-quinone reductase, A subunit [Eubacterium saphenum ATCC 49989] Length = 448 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K +L ++ + C+ C C +CP L PA +AY+ S+D Sbjct: 356 KNNNAILAFADEDKFTMPETPCISCGKCHQACPF-------DLLPAAYYKAYK----SQD 404 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L+ L + +C +C+ CP Sbjct: 405 VDT---LNKLM----INQCMECGSCSYVCP 427 >gi|87311483|ref|ZP_01093602.1| putative oxidase [Blastopirellula marina DSM 3645] gi|87285739|gb|EAQ77654.1| putative oxidase [Blastopirellula marina DSM 3645] Length = 986 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 12/95 (12%) Query: 170 CVMCACCSTS------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C CA C TS CP + + P R ++ + + +PFR Sbjct: 562 CNGCARCRTSGADARMCPIFRFEPKEEASPRAKANLLRGVMTGHIAPE----EMATEPFR 617 Query: 224 --LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + C C CP ++ K + ++K + Sbjct: 618 RIVDLCVNCHQCRIECPATVDIPKIVTEVKAQYYE 652 >gi|325288341|ref|YP_004264522.1| aldo/keto reductase [Syntrophobotulus glycolicus DSM 8271] gi|324963742|gb|ADY54521.1| aldo/keto reductase [Syntrophobotulus glycolicus DSM 8271] Length = 385 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 11/134 (8%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 L M+ ++ L +++ F ++ ++Q + + C C Sbjct: 252 ILSGMTTLEQLKENIALFSR-----PDFVPGCLTSREHAIIQQAKAAYESLATIPCTGCG 306 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C CP+ SD +L + D+ + + + C C Sbjct: 307 YCMP-CPNGVNISDIFLKYNAGCMFENF-----DQSKRSYMFTVRGEQDASHCAACGLCE 360 Query: 235 QSCPKGLNPAKAIA 248 + CP+ + + + Sbjct: 361 EKCPQSIAIGRQLQ 374 >gi|325673776|ref|ZP_08153467.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|325555797|gb|EGD25468.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 383 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 30/112 (26%), Gaps = 22/112 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRW-----LIDS 206 + ++ D C+ C C+ CP+ LG + RW L S Sbjct: 250 RAARDEPVWDDVADRCLTCGNCTMVCPTCFCTTAEDVSELGGEGTERRQRWASCFELDYS 309 Query: 207 RDEFQGER--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 R L D F C C CP G++ Sbjct: 310 HLHGGNVRTSGAARYRQWMTHKLGTWFDQFGSSGCVGCGRCIDWCPVGIDIT 361 >gi|260892798|ref|YP_003238895.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] gi|260864939|gb|ACX52045.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] Length = 657 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 10/74 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C CP D + +A + + R L C Sbjct: 244 EKCDRCGRCEEVCPV--EVPDPFNYGLSSRKAIYF---PYRDAFPSRYAI-----DLDHC 293 Query: 228 HTIMNCTQSCPKGL 241 C ++CP+GL Sbjct: 294 TRCGECVKACPRGL 307 >gi|20093936|ref|NP_613783.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19] gi|19886886|gb|AAM01713.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19] Length = 308 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 19/91 (20%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C C C + CP+ + + + + E L D Sbjct: 17 WERVLARCDGCGACESRCPN-------------DVPRRLFNVLAASGRFEEALSVASD-- 61 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + CP + + I ++ Sbjct: 62 ----CTVCGLCERLCPHNIPYTEVITDLRRE 88 >gi|270262058|ref|ZP_06190330.1| hypothetical protein SOD_b02650 [Serratia odorifera 4Rx13] gi|270043934|gb|EFA17026.1| hypothetical protein SOD_b02650 [Serratia odorifera 4Rx13] Length = 1177 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 3/91 (3%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-E 209 + ++ + + C C C +CP + + + P + A L S D + Sbjct: 670 TQWEKRNIAETIPLWQPDLCTQCNHCVAACP-HSAIRAKVVQPQAMEHAPASL-QSLDVK 727 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R C C + CP Sbjct: 728 ARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|78186974|ref|YP_375017.1| hydrogenase/sulfur reductase, beta subunit [Chlorobium luteolum DSM 273] gi|78166876|gb|ABB23974.1| hydrogenase/sulfur reductase, beta subunit [Chlorobium luteolum DSM 273] Length = 337 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 28/107 (26%), Gaps = 21/107 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAY----RWLID 205 ++ E R + C+ C C+ CP+ D Y G + + Sbjct: 216 PENFESRFWKEISERCIGCGSCTYLCPTCHCFDIQDEGDTYKGIRRKNWDSCSFSLFTMH 275 Query: 206 -----SRDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 R + F + C CT+ CP Sbjct: 276 TSGHNPRATQSARWRQRIMHKFNYFSLKFNVNSCTGCGRCTRECPVD 322 >gi|281358700|ref|ZP_06245177.1| hydrogenase, Fe-only [Victivallis vadensis ATCC BAA-548] gi|281314826|gb|EFA98862.1| hydrogenase, Fe-only [Victivallis vadensis ATCC BAA-548] Length = 676 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 50/218 (22%), Gaps = 50/218 (22%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTL-RRSCREGICGSCGMNIDGTNTLACVKDMKDI 107 +++ L ++ PT G C C ++I G +A Sbjct: 12 NTEVEFSDERNLLEVIRKAGIDIPTFCYHSELSIYGACRLCLVDIKGRGIMASCS----- 66 Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--- 164 + P P M V D + + P + + +D + Sbjct: 67 -----IKPEPGMVVQTDTKAIRNMRKINVELLLASHNRECPTCQRSANCTLQDLARKLGV 121 Query: 165 ----------------------DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +CV+C C C L A R Sbjct: 122 KDVRYKQTQKNLPLDTSSPSLVRDPNKCVLCGDCVRVCSEVQSVG-------ALDFASR- 173 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++ C C Q CP G Sbjct: 174 ------GSNARVVPAFDNDLSEGECVNCGQCAQVCPTG 205 >gi|66046648|ref|YP_236489.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|63257355|gb|AAY38451.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] Length = 470 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ +R E +G R + L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIIS----YDQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|87308888|ref|ZP_01091026.1| putative oxidoreductase [Blastopirellula marina DSM 3645] gi|87288231|gb|EAQ80127.1| putative oxidoreductase [Blastopirellula marina DSM 3645] Length = 980 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLYR 226 CV C C CPS ++ P + R ++ D L + + Sbjct: 566 DRCVECGYCEPVCPSRNLSTT----PRQRIILRREMMRQPADSPVTLALLRDYEYEAIET 621 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP +N + + + Sbjct: 622 CAGDGVCAIACPVNINTGNLMKEFRRQ 648 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLN--PAKAIAKIKMMLLDR 257 + RC C CP + L+ P + I ++ ++ + Sbjct: 562 EDEVDRCVECGYCEPVCPSRNLSTTPRQRII-LRREMMRQ 600 >gi|281205874|gb|EFA80063.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Polysphondylium pallidum PN500] Length = 179 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++ L + M +F+ + +I + + H R+ G C+ C C Sbjct: 32 EIMVGLYITMGYFFRKKATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCEAI 89 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 90 CPAQAITIEAEPRKDGSRRTTRYDIDMT------------------KCIYCGYCQEACPV 131 Query: 240 G 240 Sbjct: 132 D 132 >gi|126179326|ref|YP_001047291.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanoculleus marisnigri JR1] gi|125862120|gb|ABN57309.1| formate dehydrogenase, beta subunit (F420) [Methanoculleus marisnigri JR1] Length = 383 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C +CP + +D G + ++ + F R ++ D C Sbjct: 290 RCIKCYSCIENCPVCFPVADELKGNSRMVT--SGEVPPNPMFHLRRFAHISD-----SCI 342 Query: 229 TIMNCTQSCPKGLNPA 244 C + CP + A Sbjct: 343 NCGQCEELCPMDIPLA 358 >gi|13475531|ref|NP_107095.1| nitrogen fixation protein fixG [Mesorhizobium loti MAFF303099] gi|14026283|dbj|BAB52881.1| nitrogen fixation protein; FixG [Mesorhizobium loti MAFF303099] Length = 519 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 38/161 (23%), Gaps = 10/161 (6%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D A ++ K AI + VI FY Sbjct: 144 DRNARMKLDAGPWTARKLVLRVSKHAIWL-------VIGAATGGAWIFYFADAPTLAGEL 196 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + C+ CP + ++ + W Sbjct: 197 FTGTAAPVAYITVAVLTATTYTFGGLMREQVCTYMCPWPRIQAAMLDENSLTVTYNDWRG 256 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + R + L + C C CP G++ Sbjct: 257 EPRSRHAKKVLAA---GQPVGDCVDCNACVAVCPMGIDIRD 294 >gi|94310978|ref|YP_584188.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93354830|gb|ABF08919.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cupriavidus metallidurans CH34] Length = 509 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 8/104 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + +L G + C CP Y + + Y Sbjct: 222 GPWQSFWMLFY---AFATWGNAGFMREQVCKYMCP-YARFQSVMVDRDTYVVTYDV---G 274 Query: 207 RDEFQGERLDNLE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 R E +G R + + C C Q CP G++ + Sbjct: 275 RGEPRGSRSRKTDRHAAGIGDCVNCSICVQVCPTGIDIRDGLQY 318 >gi|315126244|ref|YP_004068247.1| iron-sulfur cluster-binding protein FixG [Pseudoalteromonas sp. SM9913] gi|315014758|gb|ADT68096.1| iron-sulfur cluster-binding protein FixG [Pseudoalteromonas sp. SM9913] Length = 451 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 7/85 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 G + C+ +CP + S + +++ DS R E +G R + Sbjct: 189 AFCTYGNAGFLREKMCTVACPYSRFQSVMFDKDTLVVTY-----DSERGENRGPRKRKAD 243 Query: 220 -DPFRLYRCHTIMNCTQSCPKGLNP 243 + L C C + CP G++ Sbjct: 244 PNALNLGDCVDCNLCVEVCPAGIDI 268 >gi|283956832|ref|ZP_06374306.1| hypothetical protein C1336_000310030 [Campylobacter jejuni subsp. jejuni 1336] gi|283791693|gb|EFC30488.1| hypothetical protein C1336_000310030 [Campylobacter jejuni subsp. jejuni 1336] Length = 357 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ + + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIAKEFDFNLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|257095311|ref|YP_003168952.1| NADH dehydrogenase subunit I [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047835|gb|ACV37023.1| NADH-quinone oxidoreductase, chain I [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 162 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 25/132 (18%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K + V + +++ +++ + H R+ +G C+ C C Sbjct: 15 ELFKGMSVTGRYMFARKITVQY--PEEKTPQSFRFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + D RD+ D L +C C ++CP Sbjct: 73 CPAMAITIES---------------DQRDDGSRRTTRYDID---LTKCIFCGFCEEACPV 114 Query: 240 GLNPAKAIAKIK 251 AI + + Sbjct: 115 -----DAIVETR 121 >gi|229497138|ref|ZP_04390841.1| electron transport complex protein RnfC [Porphyromonas endodontalis ATCC 35406] gi|229315955|gb|EEN81885.1| electron transport complex protein RnfC [Porphyromonas endodontalis ATCC 35406] Length = 443 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + +C+ C C CP L PA ++ RD + Sbjct: 362 RRPMRDCIRCGKCVGVCPM-------GLNPAFIM---------RDTVAKNWDSC--EKMN 403 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C+ +CP I K ++ Sbjct: 404 VADCIECGSCSFTCPADRPLLDHIRIGKQTVM 435 >gi|124485782|ref|YP_001030398.1| NADH-plastoquinone oxidoreductase subunit [Methanocorpusculum labreanum Z] gi|124363323|gb|ABN07131.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanocorpusculum labreanum Z] Length = 146 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 18/126 (14%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P+ ++ L ++ F Q + L P+ + DR C C Sbjct: 16 PVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLYDRN------LCNGCG 69 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C CP++ Y P D+ D+ + ++ + + C C Sbjct: 70 LCMKVCPAHAIEQVVYPVPPAK--------DAEDKPRAQKRVRIY----VGNCIFCGQCI 117 Query: 235 QSCPKG 240 CPKG Sbjct: 118 DICPKG 123 >gi|86740730|ref|YP_481130.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Frankia sp. CcI3] gi|86567592|gb|ABD11401.1| Pyruvate:ferredoxin (flavodoxin) oxidoreductase [Frankia sp. CcI3] Length = 1195 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 21/78 (26%), Gaps = 5/78 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPA-ILLQAYRWLIDSRDEFQGE-RLDNLEDPF 222 C+ C C+ SCP + A +D RL P Sbjct: 705 WDADLCIDCGKCAISCPHAAIRMTLFDPARLADAPASFRHKKPKDRTLAAFRLAVQVAPD 764 Query: 223 RLYRCHTIMNCTQSCPKG 240 C C ++CP Sbjct: 765 ---DCTGCGICVEACPAK 779 >gi|42526786|ref|NP_971884.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] gi|41817101|gb|AAS11795.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] Length = 493 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 18/89 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP + P +A S+DE ER+D ++C Sbjct: 147 EKCINCGICLKNCPYHAVIK----IPVPCEEACPVGAISKDENGKERIDY-------HKC 195 Query: 228 HTIMNCTQSCP------KGLNPAKAIAKI 250 NC + CP KG I + Sbjct: 196 IFCGNCMRECPFGAMMDKG-QIVDVIKHL 223 >gi|153007810|ref|YP_001369025.1| cytochrome c oxidase cbb3 type accessory protein FixG [Ochrobactrum anthropi ATCC 49188] gi|151559698|gb|ABS13196.1| Cytochrome c oxidase cbb3 type accessory protein FixG [Ochrobactrum anthropi ATCC 49188] Length = 521 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 33/162 (20%), Gaps = 12/162 (7%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + M +D + K ++ + VI L FY Sbjct: 147 DRNARMKLDKAPWTFDKVWKRVAKHSVWI-------VIGVLTGGAWIFYFADAPKLLMDF 199 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + C+ CP Sbjct: 200 VTGQAAPVAYFTVAILTATTYIFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYN 255 Query: 205 DSRDEFQGER-LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D R E + + + C C +CP G++ Sbjct: 256 DWRGEPRSRHSKKAIAAGETVGDCVDCNACVAACPMGIDIRD 297 >gi|124267923|ref|YP_001021927.1| putative oxidoreductase [Methylibium petroleiphilum PM1] gi|124260698|gb|ABM95692.1| putative oxidoreductase protein [Methylibium petroleiphilum PM1] Length = 1308 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Query: 169 ECVMCACCSTSCPSY-------WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C+ C C C ++ + ++ L ++L++A+ + +R + ED Sbjct: 838 DCLRCGKCKPVCATHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGISIKHWQEFEDV 897 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP ++ ++ +L Sbjct: 898 --ADHCTVCHKCLSPCPVKIDFGDVSMNMRNLL 928 >gi|319794660|ref|YP_004156300.1| NADH-quinone oxidoreductase, chain i [Variovorax paradoxus EPS] gi|315597123|gb|ADU38189.1| NADH-quinone oxidoreductase, chain I [Variovorax paradoxus EPS] Length = 181 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + K L + + ++ R I + H R+ +G C+ C C Sbjct: 33 FELFKGLAITGKYAFA--RKITVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEA 90 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + + R+ ID L +C C +SCP Sbjct: 91 VCPALAITIESDVRDDGSRRTTRYDID------------------LTKCIFCGFCEESCP 132 Query: 239 KG 240 Sbjct: 133 VD 134 >gi|262277037|ref|ZP_06054830.1| bifunctional protein [alpha proteobacterium HIMB114] gi|262224140|gb|EEY74599.1| bifunctional protein [alpha proteobacterium HIMB114] Length = 967 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYL 191 RS+ + + + Q D + C C CPSY + Sbjct: 526 RSLMRYKSDYKAENISTHYDWSDWGQFSDAVEMCNNNGACRKLDSGVMCPSYRVTKEEKD 585 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + ++ + + L C + C + CP ++ +AK+K Sbjct: 586 LVRGRANTLRLALSNQLPEGSFVSKGMYETMEL--CVSCKACQRECPMSVD----MAKMK 639 Query: 252 MMLL 255 L Sbjct: 640 SEFL 643 >gi|312139316|ref|YP_004006652.1| NADH dehydrogenase (quinone) chain i nuoi [Rhodococcus equi 103S] gi|311888655|emb|CBH47967.1| NADH dehydrogenase (quinone) chain I NuoI [Rhodococcus equi 103S] Length = 181 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V S + + + + A+ H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTFSTMFK--KPVTEFYPEQKAPTAERYHGRHQLNRHPDGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A + R+ GER + L RC C ++CP Sbjct: 67 --DAIYVEGADNTEEERYSP-------GERYGRVYQINYL-RCIGCGLCVEACP 110 >gi|299537486|ref|ZP_07050780.1| formate dehydrogenase alpha chain [Lysinibacillus fusiformis ZC1] gi|298727047|gb|EFI67628.1| formate dehydrogenase alpha chain [Lysinibacillus fusiformis ZC1] Length = 978 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 44/161 (27%), Gaps = 19/161 (11%) Query: 83 GICGSCGMN-IDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEP 141 + SC +DG N K + L + + + + + + H + E Sbjct: 55 QLVRSCSTKAVDGMNVFLTSDKAKAAQTEAMDRLLENHLLYCTVCDNNNGNCALHNTAEM 114 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILL 197 P + ++ HE C+ C C C + N L Sbjct: 115 MEIEHQKYPYQPKVEPHEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAER 174 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D+ + D C + C CP Sbjct: 175 P--RVIWDTGV--------AINDS----SCVSCGQCVTVCP 201 >gi|325676675|ref|ZP_08156350.1| NADH-quinone oxidoreductase subunit I [Rhodococcus equi ATCC 33707] gi|325552530|gb|EGD22217.1| NADH-quinone oxidoreductase subunit I [Rhodococcus equi ATCC 33707] Length = 181 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V S + + + + A+ H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTFSTMFK--KPVTEFYPEQKAPTAERYHGRHQLNRHPDGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A + R+ GER + L RC C ++CP Sbjct: 67 --DAIYVEGADNTEEERYSP-------GERYGRVYQINYL-RCIGCGLCVEACP 110 >gi|116254599|ref|YP_770435.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] gi|115259247|emb|CAK10379.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] Length = 107 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 4/85 (4%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + + C+ C C C S + A + + D D+F GE Sbjct: 12 RWMPEYLNSINPAMCIGCGRCFKVC-SREVMHAHGIDEAGDMLG---VCDGEDDFNGELS 67 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 + RC C + CPK Sbjct: 68 RVIMVIDYPGRCIGCGACARVCPKN 92 >gi|325681422|ref|ZP_08160948.1| oxidoreductase, aldo/keto reductase family protein [Ruminococcus albus 8] gi|324106912|gb|EGC01202.1| oxidoreductase, aldo/keto reductase family protein [Ruminococcus albus 8] Length = 383 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 24/91 (26%), Gaps = 7/91 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D L C C C CP D + + R D D N+ Sbjct: 292 DTILDTPLIGCTSCRYCVDGCPMSIKIPDIF----RCVNTLRLYPD--DWRAKNFYGNVI 345 Query: 220 DPFR-LYRCHTIMNCTQSCPKGLNPAKAIAK 249 + C C CP+ L + + Sbjct: 346 NGAGRAGDCIQCGQCEGVCPQHLEIITLLQE 376 >gi|258513440|ref|YP_003189662.1| hypothetical protein Dtox_0076 [Desulfotomaculum acetoxidans DSM 771] gi|257777145|gb|ACV61039.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 454 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 12/94 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSR-----DE 209 R + + CV C C+ +C +Y D P + R + ++ R Sbjct: 47 RSFVMAMESCVKCGQCAENCHTYLGTRDPNNIPTNRAELIRKIYKRYFTLEGRWFGKLVG 106 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLN 242 + LD +E + Y C C CP G++ Sbjct: 107 AEDINLDVIESWYSYYYQCSQCRRCAYVCPFGID 140 >gi|150007170|ref|YP_001301913.1| electron transport complex protein RnfC [Parabacteroides distasonis ATCC 8503] gi|255015216|ref|ZP_05287342.1| electron transport complex, protein RnfC [Bacteroides sp. 2_1_7] gi|298377595|ref|ZP_06987547.1| Na(+)-translocating NADH-quinone reductase, A subunit [Bacteroides sp. 3_1_19] gi|149935594|gb|ABR42291.1| electron transport complex, protein RnfC [Parabacteroides distasonis ATCC 8503] gi|298265614|gb|EFI07275.1| Na(+)-translocating NADH-quinone reductase, A subunit [Bacteroides sp. 3_1_19] Length = 443 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + +C+ CA C CP L P +L+ A + L Sbjct: 358 EESVRKPIRDCIRCAKCVGVCPM-------GLNPTLLMNATEFQN-----------WELA 399 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + C +C+ +CP I K ++ Sbjct: 400 EKNYITDCIECGSCSYTCPANRPLLDQIRLGKGKVM 435 >gi|110639798|ref|YP_680008.1| oxidoreductase [Cytophaga hutchinsonii ATCC 33406] gi|110282479|gb|ABG60665.1| probable oxidoreductase [Cytophaga hutchinsonii ATCC 33406] Length = 975 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 28/113 (24%), Gaps = 9/113 (7%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + K + + +C C T CPS+ + Sbjct: 533 RYASGQHTPDIKTTFNFEKSLGIVRMAEQCNGAGDCRKSSIIGGTMCPSFQATRNEKDTT 592 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R + + + + + L C + C CP ++ K Sbjct: 593 RARANILREFLTTSGKQNKFDHKEIYEVMDL--CLSCKGCKSECPSNVDVTKL 643 >gi|163753540|ref|ZP_02160664.1| probable ferredoxin [Kordia algicida OT-1] gi|161327272|gb|EDP98597.1| probable ferredoxin [Kordia algicida OT-1] Length = 474 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 27/117 (23%), Gaps = 1/117 (0%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V +++ I+ L C +CP Sbjct: 171 VFLAYLIGSDELIQDILDGPFKHLETLFPLLIFTAVFYFVFAWF-REQVCIIACPYGRLQ 229 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 +I++ + + + R + C C CP G++ Sbjct: 230 GVLLDDKSIVVAYDHKRGEGENGRKKFRKNEDRYELGFGDCIDCFQCVNVCPTGIDI 286 >gi|153840324|ref|ZP_01992991.1| electron transport complex protein RnfC [Vibrio parahaemolyticus AQ3810] gi|149746011|gb|EDM57141.1| electron transport complex protein RnfC [Vibrio parahaemolyticus AQ3810] Length = 452 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 ++ L + + EC+ C C+ +CP+ L P L Sbjct: 9 SQVPITKTANCILAPTRHEISAHQYEMECIRCGQCAEACPAS-------LLPQQLQWH-- 59 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + E D LE L C C CP + + Sbjct: 60 --------AKAEEYDKLE-ELNLKDCIECGACAFVCPSEIPLVQ 94 >gi|330972475|gb|EGH72541.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 470 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|330899469|gb|EGH30888.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 470 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|320353022|ref|YP_004194361.1| ferredoxin-dependent glutamate synthase [Desulfobulbus propionicus DSM 2032] gi|320121524|gb|ADW17070.1| ferredoxin-dependent glutamate synthase [Desulfobulbus propionicus DSM 2032] Length = 546 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 11/102 (10%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 RSI ++S +++ EDR C +C C+ +CP + + Sbjct: 5 RSIYTSPSSLSYHDLPWIIEHREDR--------CTLCGRCTAACPVGAISLSHF---RQR 53 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + L R + RC C CP Sbjct: 54 VPKLDVLQKRRGSDYRHFTGIRQSTDIAKRCIGCGMCASVCP 95 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 9/20 (45%) Query: 221 PFRLYRCHTIMNCTQSCPKG 240 R RC CT +CP G Sbjct: 24 EHREDRCTLCGRCTAACPVG 43 >gi|294102538|ref|YP_003554396.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulfur binding protein [Aminobacterium colombiense DSM 12261] gi|293617518|gb|ADE57672.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulfur binding protein [Aminobacterium colombiense DSM 12261] Length = 674 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 64/227 (28%), Gaps = 34/227 (14%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRS-CREGICGSCGMNIDGTNTL-ACV 101 T +D C V D +L I K D PTL G C C + ++G+N L Sbjct: 5 TLNIDGKVCKGTVGDTILDIARKNDVYIPTLCYLEGISAIGSCRMCVVEVEGSNKLLTSC 64 Query: 102 KDMKDIKGAIAVYPLP----HMSVIKDLVVDMSHFY-----------SQHRSIEPWLKTV 146 I + +++ L +HF + K Sbjct: 65 TTPATDGMKIHTQTEKLRAYRLQILELLFAGRNHFCMFCSQSGDCELQRLAIEHGMDKVR 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + D C++C C C +G L R S Sbjct: 125 YPYLYSDFHNDASDEDLQVDHNRCILCLRCIRVC-------GEKVGAHTLDLEKRGWNAS 177 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKM 252 G+ L + C + C Q CP G + + + + Sbjct: 178 VVSDLGKVLGESDT------CVSCGACAQVCPTGTITIRDFVYRGRR 218 >gi|256371188|ref|YP_003109012.1| NADH-quinone oxidoreductase, chain I [Acidimicrobium ferrooxidans DSM 10331] gi|256007772|gb|ACU53339.1| NADH-quinone oxidoreductase, chain I [Acidimicrobium ferrooxidans DSM 10331] Length = 229 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 19/109 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 H + DG+ +C+ C C+ +CP A + Sbjct: 29 PEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAGACP------------ARCIYVRGAN 76 Query: 204 IDS-RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 D R GER + + L RC C ++CP +AI + K Sbjct: 77 NDPERPTSPGERFGFVYEINYL-RCIHCDLCVEACP-----TEAITESK 119 >gi|239816475|ref|YP_002945385.1| NADH dehydrogenase subunit I [Variovorax paradoxus S110] gi|239803052|gb|ACS20119.1| NADH-quinone oxidoreductase, chain I [Variovorax paradoxus S110] Length = 181 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + K L + + ++ R I + H R+ +G C+ C C Sbjct: 33 FELFKGLAITGKYAFA--RKITVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEA 90 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + + R+ ID L +C C +SCP Sbjct: 91 VCPALAITIESDVRDDGSRRTTRYDID------------------LTKCIFCGFCEESCP 132 Query: 239 KG 240 Sbjct: 133 VD 134 >gi|302184938|ref|ZP_07261611.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. syringae 642] Length = 470 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|300711324|ref|YP_003737138.1| putative oxidoreductase [Halalkalicoccus jeotgali B3] gi|299125007|gb|ADJ15346.1| putative oxidoreductase [Halalkalicoccus jeotgali B3] Length = 1006 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 40/156 (25%), Gaps = 20/156 (12%) Query: 121 VIKDLVVDMSHFY-----------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 V +DL + + +L+ D Sbjct: 546 VFRDLKTAFDPDWLLNPGSVCGDFDMSEHLRFDPDYEFEMGFDPVLEWDNDNGFQGMAEL 605 Query: 170 CVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C C C CP++ + + R + S D +GE Sbjct: 606 CHGCGGCRGPQETTGGVMCPTFRASEEEITSTRGRANMLRQAM-SGDLPEGEAFSEEFVT 664 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + C C + CP ++ AK A++ R Sbjct: 665 EVMDLCIGCKGCAKDCPSEVDMAKLKAEVTHEYHQR 700 >gi|160872870|ref|ZP_02063002.1| NADH-quinone oxidoreductase subunit i 2 (nadhdehydrogenase i subunit i 2) (ndh-1 subunit i 2) [Rickettsiella grylli] gi|159121669|gb|EDP47007.1| NADH-quinone oxidoreductase subunit i 2 (nadhdehydrogenase i subunit i 2) (ndh-1 subunit i 2) [Rickettsiella grylli] Length = 165 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K L V +F+ + + + H R+ +G C+ C C Sbjct: 18 ELFKGLGVTGRYFFK--KKVTLQFPEEETPRSVRFRGLHALRRYPNGEERCIACKLCEAV 75 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R++ R L + L++C C +SCP Sbjct: 76 CPALAITIE---------------AEPREDGS--RRTTLYEID-LFKCIYCGFCEESCPV 117 Query: 240 G 240 Sbjct: 118 D 118 >gi|83593395|ref|YP_427147.1| FAD linked oxidase [Rhodospirillum rubrum ATCC 11170] gi|83576309|gb|ABC22860.1| FAD linked oxidase [Rhodospirillum rubrum ATCC 11170] Length = 978 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 7/92 (7%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP--FRLY 225 +C + CPS+ ++ P R +++ + L Sbjct: 577 AQCQAYSTSVPMCPSFKATGEKRHSPKGRADLLRA-WHGLVSAGDPVAEDVAEEVYEALD 635 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C SCP ++ ++K + LDR Sbjct: 636 GCLGCKACLSSCPIHVDVP----ELKSLFLDR 663 >gi|307129491|ref|YP_003881507.1| Pyruvate-flavodoxin oxidoreductase [Dickeya dadantii 3937] gi|306527020|gb|ADM96950.1| Pyruvate-flavodoxin oxidoreductase [Dickeya dadantii 3937] Length = 1177 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 3/91 (3%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-E 209 + ++ + + C C C +CP + PA + + S D + Sbjct: 670 TQWEKRNIAEEIPLWKPDLCTQCNHCVAACP--HSAIRAKVVPADAMAGAPESLQSLDVK 727 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R C C + CP Sbjct: 728 ARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|153938741|ref|YP_001390542.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. Langeland] gi|152934637|gb|ABS40135.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. Langeland] gi|295318623|gb|ADF99000.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. 230613] Length = 1172 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---------FQ 211 + +C+ C CS CP +++AY D +++ Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKSPSAFETKKAT 727 Query: 212 GERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ L+ L ++ C NC CP P KA+ ++ Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MRNA 767 >gi|91762194|ref|ZP_01264159.1| formate dehydrogenase Alpha subunit (fdhF-2) [Candidatus Pelagibacter ubique HTCC1002] gi|91717996|gb|EAS84646.1| formate dehydrogenase Alpha subunit (fdhF-2) [Candidatus Pelagibacter ubique HTCC1002] Length = 922 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 23/124 (18%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I + + D L C+ C C +C L + Sbjct: 130 ISDHRYNSPKQHKGITKDTSHD-YMRMNLDNCINCGRCVRACDEIQ--GSFVLTMSGRG- 185 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI---KMMLL 255 +S+ + L F C + C +CP AI+ + K + + Sbjct: 186 -----FESKITTDNDAL------FGDSSCVSCGACAHTCP-----TDAISDVYQSKSVAV 229 Query: 256 DRKI 259 D+K+ Sbjct: 230 DKKV 233 >gi|474055|emb|CAA53462.1| succinate dehydrogenase subunit-B [Haemonchus contortus] Length = 41 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/39 (53%), Positives = 29/39 (74%) Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 D+Y GPA+L+QAYR +IDSRD++ ERL + D F +R Sbjct: 3 DKYHGPAVLMQAYRRIIDSRDDYPKERLARMHDAFSAFR 41 >gi|116748266|ref|YP_844953.1| response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Syntrophobacter fumaroxidans MPOB] gi|116697330|gb|ABK16518.1| response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Syntrophobacter fumaroxidans MPOB] Length = 1139 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 40/150 (26%), Gaps = 10/150 (6%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 N+ GT + D G + P+ + F+ + Sbjct: 39 NLGGTLRQLDHQFPTDHCGMCRMLPMTERDTCSQFCLRKGLFHDNIEIMLSTELAALQGE 98 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + + + R + C C C+ CP + G A Y + + Sbjct: 99 PGKFVATLRYRPSLIDPERCNGCGECTRVCPV-EVPDEFNAGLATRKAVYLPVPHNLPNS 157 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D C+ C +CP G Sbjct: 158 ------YVIDTD---ACNHCGACQNACPTG 178 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 23/88 (26%), Gaps = 3/88 (3%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 Q D + + CS C D A + Sbjct: 49 HQFPTDHCGMCRMLPMTERDTCSQFCLRKGLFHDNIEIMLSTELAALQGEPGKFVATLRY 108 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +L DP RC+ CT+ CP + Sbjct: 109 RPSLIDPE---RCNGCGECTRVCPVEVP 133 Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 26/73 (35%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C +C C +CP + D + ER+ + D F C Sbjct: 1072 SLCSLCERCVVACPFHARWYDE---------------------EEERI--VVDEFV---C 1105 Query: 228 HTIMNCTQSCPKG 240 C+ +CP G Sbjct: 1106 QGCGACSAACPNG 1118 >gi|302340161|ref|YP_003805367.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Spirochaeta smaragdinae DSM 11293] gi|301637346|gb|ADK82773.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Spirochaeta smaragdinae DSM 11293] Length = 583 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 64/232 (27%), Gaps = 46/232 (19%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGIC 85 +K I R N ++ P G +L + KI P L C Sbjct: 1 MKTVNI-RINGESVQVP-----------EGTTILKAAEQVNVKI-PVLCYHPDLPPWAAC 47 Query: 86 GSCGMNIDGTNTL--ACVKDMKDIKGAIAVYPLPH------------MSVIKDLVVDMSH 131 G C + ++ + + AC + + G I P H L + Sbjct: 48 GICVVKLENSPKMVRACATPVSEGMGIITHDPELHEIRRTVIELILSTHPNDCLKCGRNG 107 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYW-WNSD 188 + + P + + +CV C C+ C + Sbjct: 108 NCELQKLAADFGIREQPFEQRIREIEPDTSTPSIVFNPEKCVNCGRCANVCQVMQGVWAL 167 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++G ++ + S D D L D C C+ CP G Sbjct: 168 EFIGRGENVR----IAPSAD-------DTLNDSP----CIKCGQCSAHCPVG 204 >gi|298717366|ref|YP_003730008.1| molybdopterin oxidoreductase family protein [Pantoea vagans C9-1] gi|298361555|gb|ADI78336.1| molybdopterin oxidoreductase family protein [Pantoea vagans C9-1] Length = 990 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 27/105 (25%), Gaps = 19/105 (18%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H I+ + P +C++C C +C + + L Sbjct: 118 DMHIPIQYYPHQPKPYAKDHSNPF-----YTYDPDQCILCGRCVEACQNVEV--NETLSI 170 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R L D E G C + +C CP Sbjct: 171 DYTQAHPRVLWDGGTEIAGS------------SCVSCGHCVTVCP 203 >gi|217967478|ref|YP_002352984.1| electron transport complex, RnfABCDGE type, C subunit [Dictyoglomus turgidum DSM 6724] gi|217336577|gb|ACK42370.1| electron transport complex, RnfABCDGE type, C subunit [Dictyoglomus turgidum DSM 6724] Length = 437 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 ED+ + CV C C CP + R++ + E Sbjct: 352 FPEDKVEYYDPIPCVRCGKCLEVCPMGLMPTT----------LARYVKKGKLVEAEE--- 398 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +C CP + I K +L R+ Sbjct: 399 -----LGILDCIECGSCNYICPSRRPLLQWIRVGKTDILARR 435 >gi|167553155|ref|ZP_02346905.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322355|gb|EDZ10194.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 451 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHMLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|153810354|ref|ZP_01963022.1| hypothetical protein RUMOBE_00735 [Ruminococcus obeum ATCC 29174] gi|149833533|gb|EDM88614.1| hypothetical protein RUMOBE_00735 [Ruminococcus obeum ATCC 29174] Length = 338 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 25/206 (12%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 + +C GTN L + L + Sbjct: 131 ENTVFAVMGCKESGKNCFCVSMGTNRCEEYDMYIFPDEKGCYMELRCRELEVLLWDYGQN 190 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 + +E V + +D + C+ C C+ CP+ + + + Sbjct: 191 AQEKLNFVEKNEIHVEIPENLPDIIH-QDSMWQEYGSRCIGCGRCNFVCPTCTCFTMQDI 249 Query: 192 GPAILLQA--------------YRWLI--DSRDEFQGERL--------DNLEDPFRLYRC 227 +A Y + S + QGER+ + + F + C Sbjct: 250 FYKDNPKAGERRRVWASCQVDGYSDIAGGHSFRQSQGERMRFKVLHKVADYKKRFGYHMC 309 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMM 253 C CP+ ++ + K+K Sbjct: 310 VGCGRCENVCPEYISYVACLQKLKEK 335 >gi|56461673|ref|YP_156954.1| Iron-sulfur cluster-binding protein [Idiomarina loihiensis L2TR] gi|56180683|gb|AAV83405.1| Iron-sulfur cluster-binding protein [Idiomarina loihiensis L2TR] Length = 476 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 G + C+ CP + S + + R E +G R + Sbjct: 210 AFCTYGNAGYMREIMCTHMCPYARFQSAMFDKDTYTVSYDA----ERGEPRGPRSRKADP 265 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 266 AEKGLGHCIDCYMCVQVCPTGIDI 289 >gi|56418994|ref|YP_146312.1| formate dehydrogenase chain A [Geobacillus kaustophilus HTA426] gi|56378836|dbj|BAD74744.1| formate dehydrogenase chain A [Geobacillus kaustophilus HTA426] Length = 987 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 42/176 (23%), Gaps = 31/176 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVKDM-------------KDIKGAIAVYPLPHMSVIKDLV 126 C +C ++GT AC + K + L + + + Sbjct: 44 GAIQTCDTCIAEVNGTLLRACATPVEDGMVVELGSPRAKAAQKEAMDRLLENHLLYCTVC 103 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPS 182 + + H + E P + + E C+ C C +C + Sbjct: 104 DNNNGNCKLHNTAEMMQIEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQN 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R + D C + C CP Sbjct: 164 LQVNETLSIDWEAERP--RVVWDGGVPINES------------SCVSCGQCVTVCP 205 >gi|253995914|ref|YP_003047978.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] gi|253982593|gb|ACT47451.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] Length = 477 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C CP + S + +++ R E + R ++ Sbjct: 209 AFATYGNAGFLREQICKHMCPYARFQSAMFDNDTLIVT----YDQERGEPRSGRSRKVDA 264 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 265 KQTGLGDCIDCSFCVQVCPTGIDI 288 >gi|206967976|ref|ZP_03228932.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH1134] gi|206736896|gb|EDZ54043.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH1134] Length = 978 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 54/216 (25%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D + ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKMILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|78485170|ref|YP_391095.1| NADH dehydrogenase subunit I [Thiomicrospira crunogena XCL-2] gi|115502545|sp|Q31HF2|NUOI_THICR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|78363456|gb|ABB41421.1| NADH dehydrogenase I chain I [Thiomicrospira crunogena XCL-2] Length = 163 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K L V + + + I + H R+ +G C+ C C Sbjct: 16 ELFKGLAVTGKYLFK--KKITVRYPEEKTPLSPRFRGHHALRRYENGEERCIACKLCEAV 73 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ A + RD+ R D +++C C ++CP Sbjct: 74 CPA---------------NAITIESEERDDGT--RRTTQYDID-MFKCIYCGFCEEACPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|163858668|ref|YP_001632966.1| hypothetical protein Bpet4348 [Bordetella petrii DSM 12804] gi|163262396|emb|CAP44699.1| unnamed protein product [Bordetella petrii] Length = 1009 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 8/99 (8%) Query: 167 LYECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C C T CPSY D R + + D + Sbjct: 590 AEMCNNNGHCRKFDAGTMCPSYRVTRDEQHLTRGRANTLRLALSGQLGPDALVSDEMRAT 649 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRKI 259 L C + C + CP G++ A+ I + R + Sbjct: 650 MDL--CVSCKGCKRDCPTGIDMARMKIEFLNQWRQKRGL 686 >gi|256751838|ref|ZP_05492710.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter ethanolicus CCSD1] gi|256749245|gb|EEU62277.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter ethanolicus CCSD1] Length = 1197 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 35/147 (23%), Gaps = 24/147 (16%) Query: 113 VYPLPHM--SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + P P ++ + + + + T + + C Sbjct: 656 IKPEPDFVKNIQRPIERNEGDLLPVSAFVGMEDGTFPTGTTAYEKRGIAVLIPEWQIDNC 715 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLY---- 225 + C CS CP +L ++ + L+ Sbjct: 716 IQCNQCSFVCP--HAVIRPFLLTEKEVKKA--------PPTFNVKKAIGRGLEGLWYRIQ 765 Query: 226 ----RCHTIMNCTQSCPKGLNPAKAIA 248 C NC CP P KA+ Sbjct: 766 VSPLDCTGCGNCADVCPA---PTKALI 789 >gi|320115140|ref|YP_004185299.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319928231|gb|ADV78916.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 1197 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 35/147 (23%), Gaps = 24/147 (16%) Query: 113 VYPLPHM--SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + P P ++ + + + + T + + C Sbjct: 656 IKPEPDFVKNIQRPIERNEGDLLPVSAFVGMEDGTFPTGTTAYEKRGIAVLIPEWQIDNC 715 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLY---- 225 + C CS CP +L ++ + L+ Sbjct: 716 IQCNQCSFVCP--HAVIRPFLLTEKEVKKA--------PPTFNVKKAIGRGLEGLWYRIQ 765 Query: 226 ----RCHTIMNCTQSCPKGLNPAKAIA 248 C NC CP P KA+ Sbjct: 766 VSPLDCTGCGNCADVCPA---PTKALI 789 >gi|167770275|ref|ZP_02442328.1| hypothetical protein ANACOL_01618 [Anaerotruncus colihominis DSM 17241] gi|167667597|gb|EDS11727.1| hypothetical protein ANACOL_01618 [Anaerotruncus colihominis DSM 17241] Length = 388 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 13/135 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + S++ + + K+ + ++ L C C C+ CP Sbjct: 263 MSSLEQMEDNLASMKRFSGLTT--VQKQTIVQAQEALAEIPLIPCTNCNYCAKVCP---- 316 Query: 186 NSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDPFRLYR---CHTIMNCTQSCPKGL 241 + +G + A +L + S E + + L R C C Q+CP+ + Sbjct: 317 ---KNIGISGSFTAMNYLTLYSSREMAVNQENWLVGRHGKNRANECIKCGKCEQACPQHI 373 Query: 242 NPAKAIAKIKMMLLD 256 + + ++ LL+ Sbjct: 374 HIRDELEQVSKALLE 388 >gi|52549744|gb|AAU83593.1| carbon monoxide dehydrogenase subunit alpha [uncultured archaeon GZfos31B6] Length = 717 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 19/102 (18%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +L E + EC+ C C +CP+ D + Sbjct: 380 KPKRDKLNHLPELDEVQKLAEECIKCGWCDRACPNSLPVKDAMI---------------- 423 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + + L L + F C + C C K L I K Sbjct: 424 -KAKEGDLSELSNLFS--PCMSCGRCESECKKDLPIVSMILK 462 >gi|73540672|ref|YP_295192.1| NADH dehydrogenase subunit I [Ralstonia eutropha JMP134] gi|115502538|sp|Q473T5|NUOI_RALEJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|72118085|gb|AAZ60348.1| NADH-quinone oxidoreductase, chain I [Ralstonia eutropha JMP134] Length = 163 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + + H R+ +G C+ C C CP+ + + Sbjct: 31 RKVTVQFPEEKTPISPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESDVRADGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 91 RRTTRYDID------------------LTKCIFCGFCEEACPVD 116 >gi|167036716|ref|YP_001664294.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039436|ref|YP_001662421.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Thermoanaerobacter sp. X514] gi|300915448|ref|ZP_07132761.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter sp. X561] gi|307725240|ref|YP_003904991.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter sp. X513] gi|166853676|gb|ABY92085.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Thermoanaerobacter sp. X514] gi|166855550|gb|ABY93958.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300888508|gb|EFK83657.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter sp. X561] gi|307582301|gb|ADN55700.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thermoanaerobacter sp. X513] Length = 1171 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 35/147 (23%), Gaps = 24/147 (16%) Query: 113 VYPLPHM--SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYEC 170 + P P ++ + + + + T + + C Sbjct: 630 IKPEPDFVKNIQRPIERNEGDLLPVSAFVGMEDGTFPTGTTAYEKRGIAVLIPEWQIDNC 689 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLY---- 225 + C CS CP +L ++ + L+ Sbjct: 690 IQCNQCSFVCP--HAVIRPFLLTEKEVKKA--------PPTFNVKKAIGRGLEGLWYRIQ 739 Query: 226 ----RCHTIMNCTQSCPKGLNPAKAIA 248 C NC CP P KA+ Sbjct: 740 VSPLDCTGCGNCADVCPA---PTKALI 763 >gi|119775967|ref|YP_928707.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella amazonensis SB2B] gi|119768467|gb|ABM01038.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella amazonensis SB2B] Length = 512 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 23/96 (23%), Gaps = 19/96 (19%) Query: 158 HEDRQKIDGLYECVMCAC-------CSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSR 207 D + C C CP D + A R Sbjct: 237 FWDTAWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAA-------R 289 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 E +G R L C C + CP G++ Sbjct: 290 GESRGPRKRKAATD--LGDCVDCNLCVEVCPTGIDI 323 >gi|189500776|ref|YP_001960246.1| DsrK protein [Chlorobium phaeobacteroides BS1] gi|189496217|gb|ACE04765.1| DsrK protein [Chlorobium phaeobacteroides BS1] Length = 549 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R L CV C C+ C + D P + + R + + + L Sbjct: 92 RSFKLFLDTCVRCGACADKCHFFLGTGDPKNMPVVRAELIRSVYRNDFPLAEKILKGFSG 151 Query: 221 PFRL-------YR-----CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L + C C+ CP G++ A+ I + LL Sbjct: 152 SRKLTPEVIKEWHMYFHQCTECRRCSVFCPFGIDTAE-ITMMGRELL 197 >gi|242240653|ref|YP_002988834.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya dadantii Ech703] gi|242132710|gb|ACS87012.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Dickeya dadantii Ech703] Length = 1177 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 11/93 (11%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSR 207 ++ + + C C C +CP + +D G LQ + +R Sbjct: 672 WEKRNIAEEIPLWKPALCTQCNHCVAACPHSAIRAKVVPADAMAGAPASLQ--SLEVKAR 729 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + + C C + CP Sbjct: 730 DMRGQKYVLQVAPED----CTGCNLCVEVCPAK 758 >gi|220936154|ref|YP_002515053.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997464|gb|ACL74066.1| iron-sulfur cluster-binding protein [Thioalkalivibrio sp. HL-EbGR7] Length = 468 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 12/87 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED---- 220 + C+ CP + S + +++ D R E R Sbjct: 200 YVMAGLAREQVCTYMCPYARFQSVMFDRDTLIVS----YDDKRGEGSAGRAKVAAGLKSR 255 Query: 221 ----PFRLYRCHTIMNCTQSCPKGLNP 243 + C C Q CP G++ Sbjct: 256 DERQARGVGDCIDCGYCVQVCPTGIDI 282 >gi|167764933|ref|ZP_02437054.1| hypothetical protein BACSTE_03325 [Bacteroides stercoris ATCC 43183] gi|167697602|gb|EDS14181.1| hypothetical protein BACSTE_03325 [Bacteroides stercoris ATCC 43183] Length = 169 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F+ + + + + K ++ + + CV C C T+CP+ Sbjct: 24 MKTTMTVFWRKKTTEQYPENRKTLKLSERFRGTLTMPHNEKNEHHCVACGLCQTACPN-- 81 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ I++ D + + L + L C C +CP Sbjct: 82 ----------DTIKVTSQTIETEDGKKKKILAKY--EYDLGSCIFCQLCVNACP 123 >gi|291279648|ref|YP_003496483.1| formate dehydrogenase subunit alpha [Deferribacter desulfuricans SSM1] gi|290754350|dbj|BAI80727.1| formate dehydrogenase, alpha subunit [Deferribacter desulfuricans SSM1] Length = 908 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 51/202 (25%), Gaps = 29/202 (14%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDIKG 109 D M + P L R G C C + ++ AC ++D Sbjct: 10 DYSFKEKMTIIDACESVGIYIPKLCYDKRLKPIGRCKLCIVKVNDKIVTACETKIEDGMD 69 Query: 110 AIA--VYPLPHMSVIKDLVVD------MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 I + DL+VD ++ + + + + + Sbjct: 70 IITNDEELRSFRKINFDLLVDNIYVERVNDISELSKLFKYFGYKSISSRCFSENRIVSNP 129 Query: 162 QKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 CV C C ++C + Y G L DE E L Sbjct: 130 FFSFDNNLCVQCGRCVSACKELQCRFVWNFAYKGKNQKLTI------GADESFEEAL--- 180 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 C C CP G Sbjct: 181 --------CEFCGTCVDFCPTG 194 >gi|238913465|ref|ZP_04657302.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|289825954|ref|ZP_06545113.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 442 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 234 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 288 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 289 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 328 >gi|224542163|ref|ZP_03682702.1| hypothetical protein CATMIT_01338 [Catenibacterium mitsuokai DSM 15897] gi|224524931|gb|EEF94036.1| hypothetical protein CATMIT_01338 [Catenibacterium mitsuokai DSM 15897] Length = 374 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 18/142 (12%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++ V+ + +M +E + + A ++ D C C+ Sbjct: 238 LDNVQVVLSGMSNMEQLLDNTGYMEDFKPLNEEEQAL--IKKAVDIINSSIEIPCTGCSY 295 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG------ERLDNLEDPFR-LYRCH 228 C+ CP + + + D ++ E L F C Sbjct: 296 CTEGCPMHIAIPKYF---------SLYNADKQEVATKSWRPQGEYYTRLTHTFGKASECI 346 Query: 229 TIMNCTQSCPKGLNPAKAIAKI 250 C +CP+ L + + K+ Sbjct: 347 GCGQCEATCPQHLPIIENLQKV 368 >gi|213616359|ref|ZP_03372185.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 356 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 234 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 288 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 289 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 328 >gi|213580723|ref|ZP_03362549.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 394 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 186 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 240 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 241 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 280 >gi|213024342|ref|ZP_03338789.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 344 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 234 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 288 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 289 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 328 >gi|207857488|ref|YP_002244139.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206709291|emb|CAR33631.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|205353196|ref|YP_002226997.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272977|emb|CAR37924.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628282|gb|EGE34625.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|168466298|ref|ZP_02700168.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631413|gb|EDX49973.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|168259651|ref|ZP_02681624.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350789|gb|EDZ37420.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|204928972|ref|ZP_03220115.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321516|gb|EDZ06715.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|168229366|ref|ZP_02654424.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472885|ref|ZP_03078869.1| respiratory-chain NADH dehydrogenase 51 Kd subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459249|gb|EDX48088.1| respiratory-chain NADH dehydrogenase 51 Kd subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335834|gb|EDZ22598.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|198245042|ref|YP_002216138.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939558|gb|ACH76891.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623884|gb|EGE30229.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|62180631|ref|YP_217048.1| propanediol utilization polyhedral bodies [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128264|gb|AAX65967.1| Propanediol utilization: polyhedral bodies [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715103|gb|EFZ06674.1| Propanediol utilization protein pduS [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|56413045|ref|YP_150120.1| ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361969|ref|YP_002141606.1| ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127302|gb|AAV76808.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093446|emb|CAR58904.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 442 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 234 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 288 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 289 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 328 >gi|16765383|ref|NP_460998.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167990962|ref|ZP_02572061.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242119|ref|ZP_02667051.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447410|ref|YP_002046101.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197261904|ref|ZP_03161978.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|5069461|gb|AAD39017.1| PduS [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420583|gb|AAL20957.1| propanediol utilization protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194405714|gb|ACF65933.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197240159|gb|EDY22779.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330467|gb|EDZ17231.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338363|gb|EDZ25127.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247267|emb|CBG25091.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994102|gb|ACY88987.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158614|emb|CBW18125.1| propanediol utilization ferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913044|dbj|BAJ37018.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224698|gb|EFX49761.1| Cob(III)alamin reductase @ Cob(II)alamin reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130376|gb|ADX17806.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988988|gb|AEF07971.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 451 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|16760985|ref|NP_456602.1| ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141319|ref|NP_804661.1| ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052538|ref|ZP_03345416.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418914|ref|ZP_03351980.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425584|ref|ZP_03358334.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649054|ref|ZP_03379107.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850296|ref|ZP_03381194.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25513185|pir||AH0761 probable ferredoxin pduS [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503283|emb|CAD02414.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi] gi|29136946|gb|AAO68510.1| putative ferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 442 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 234 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 288 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 289 ATPQLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 328 >gi|86152662|ref|ZP_01070867.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843547|gb|EAQ60757.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 357 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL + D + E C Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYVYDNYENFASFYDLLLQV---QDDDIYFDFDKDEDTC 58 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ ++ + L IKDL++D + F +++ +E + Sbjct: 59 ----IVVNKQIIPLFTPLEKIAKEFDFSLCIESLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|120599991|ref|YP_964565.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560084|gb|ABM26011.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 487 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL D Sbjct: 222 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQATNLAD 281 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 P L C C + CP G++ Sbjct: 282 PT-LGDCVDCHLCVEVCPTGIDI 303 >gi|307321790|ref|ZP_07601177.1| cytochrome c oxidase accessory protein CcoG [Sinorhizobium meliloti AK83] gi|306892531|gb|EFN23330.1| cytochrome c oxidase accessory protein CcoG [Sinorhizobium meliloti AK83] Length = 524 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 11/85 (12%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + L + +R SR + ++ Sbjct: 221 YVFGGLMREQVCTYMCPWPRIQAAMLDENSL--VVTYNDWRGEPRSRHAKKAAAAGDV-- 276 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 277 ---VGDCVDCNACVAVCPMGIDIRD 298 >gi|288942126|ref|YP_003444366.1| NADH-quinone oxidoreductase, chain I [Allochromatium vinosum DSM 180] gi|288897498|gb|ADC63334.1| NADH-quinone oxidoreductase, chain I [Allochromatium vinosum DSM 180] Length = 163 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K L V +F+ + +++ + H R+ +G C+ C C Sbjct: 16 ELFKGLSVTGRYFFKRKFTVQY--PEEKAPISPRFRGLHALRRYPNGEERCIACKLCEAV 73 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L++C C +SCP Sbjct: 74 CPALAITIECEPREDGSRRTTRYEID------------------LFKCIYCGFCEESCPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|238919826|ref|YP_002933341.1| pyruvate:ferredoxin [Edwardsiella ictaluri 93-146] gi|238869395|gb|ACR69106.1| pyruvate:ferredoxin [Edwardsiella ictaluri 93-146] Length = 1176 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 9/90 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA----YRWLIDSRD 208 ++ + I C C C +CP + + + P L A + +RD Sbjct: 672 WEKRNIAETIPIWQPALCTQCNHCVAACP-HAAIRAKVVTPTALEHAPATLESLEVRARD 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +GER P C C CP Sbjct: 731 -LRGERYVLQVAPE---DCTGCNLCVTVCP 756 >gi|224370287|ref|YP_002604451.1| RnfC2 [Desulfobacterium autotrophicum HRM2] gi|223693004|gb|ACN16287.1| RnfC2 [Desulfobacterium autotrophicum HRM2] Length = 426 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 27/89 (30%), Gaps = 17/89 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 Y C+ C C CP+ + R+L S + D F L C Sbjct: 347 YPCINCGKCIRVCPANI----------PVNLLVRYLEASM-------YEEAADNFDLKSC 389 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C+ C + + I K LL Sbjct: 390 IECGMCSYVCTSRIPLFQYIRLGKHELLK 418 Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 12/34 (35%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C + CP + + ++ + + Sbjct: 347 YPCINCGKCIRVCPANIPVNLLVRYLEASMYEEA 380 >gi|20803840|emb|CAD31418.1| PROBABLE IRON-SULFUR PROTEIN FIXG [Mesorhizobium loti R7A] Length = 521 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C+ CP D R E + ++ + Sbjct: 219 YTFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYNDWRGEPRSRHAKKVQAAGQP 274 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 275 VGDCVDCNACVAVCPMGIDIRD 296 >gi|13475368|ref|NP_106932.1| nitrogen fixation protein fixG [Mesorhizobium loti MAFF303099] gi|14026120|dbj|BAB52718.1| nitrogen fixation protein; FixG [Mesorhizobium loti MAFF303099] Length = 513 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C+ CP D R E + ++ + Sbjct: 211 YTFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYNDWRGEPRSRHAKKVQAAGQP 266 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 267 VGDCVDCNACVAVCPMGIDIRD 288 >gi|146292075|ref|YP_001182499.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563765|gb|ABP74700.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 487 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL D Sbjct: 222 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQATNLAD 281 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 P L C C + CP G++ Sbjct: 282 PT-LGDCVDCHLCVEVCPTGIDI 303 >gi|241765113|ref|ZP_04763103.1| molybdopterin oxidoreductase [Acidovorax delafieldii 2AN] gi|241365264|gb|EER60099.1| molybdopterin oxidoreductase [Acidovorax delafieldii 2AN] Length = 936 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 18/98 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C C +C N ++ A R + + +L+DP Sbjct: 183 MAVNLDACIQCNRCVRACREEQVND-------VIGYALR-------GADSKIVFDLDDPM 228 Query: 223 RLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C Q+CP G L+P I K +DRK+ Sbjct: 229 AESTCVACGECVQACPTGALSPKMHIGSQK---VDRKV 263 >gi|226950172|ref|YP_002805263.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A2 str. Kyoto] gi|226842326|gb|ACO84992.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A2 str. Kyoto] Length = 1192 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPILLTDEEVKNAPEGFKSKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AVGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|170755903|ref|YP_001782366.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum B1 str. Okra] gi|169121115|gb|ACA44951.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum B1 str. Okra] Length = 1192 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPILLTDEEVKNAPEGFKSKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AVGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|168180834|ref|ZP_02615498.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum NCTC 2916] gi|182668364|gb|EDT80343.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum NCTC 2916] Length = 1192 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPILLTDEEVKNAPEGFKSKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AVGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|153940490|ref|YP_001392038.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. Langeland] gi|152936386|gb|ABS41884.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. Langeland] gi|295320051|gb|ADG00429.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum F str. 230613] Length = 1192 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 52/212 (24%), Gaps = 21/212 (9%) Query: 30 YRIYRWNPDNKGNPCMDTYYV-DLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 ++I P + V + G ++D ++ + C Sbjct: 565 FKIANIIPVEDAVKYLKDAVVTNYGKKGQKIIDMNNAAIDEGVNAIVKIEVPASWKDAKC 624 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 AC V P+ K L V + T + Sbjct: 625 --------EGACEAKENPEFIKNIVEPMNRQEGDK-LPVS---AFKGMEDGTFPSGTAAY 672 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + E L +C+ C CS CP L ++ S+ Sbjct: 673 EKRGIAINVPE-----WQLDKCIQCNQCSYVCP--HAVIRPILLTDEEVKNAPEGFKSKP 725 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + L+ Y C NC CP Sbjct: 726 AVGAKGLNFTM-AISPYDCTGCGNCADVCPAK 756 >gi|134298018|ref|YP_001111514.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134298025|ref|YP_001111521.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050718|gb|ABO48689.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] gi|134050725|gb|ABO48696.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 334 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 25/118 (21%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWN----------------SDRYLGPAILLQAY 200 E +C+ C C+ CP+ D + P L Sbjct: 216 MFEHPYWDSLYEKCLGCGACTYLCPTCHCFDIADEATDCNGCRVRNWDACMFPLFTLHGS 275 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L F + C C ++CP L+ + +A ++ Sbjct: 276 GHN--PRPGGKARWRQRLMHKFNYFVERYNATACVGCGRCIKNCPVNLDIRQVLADVR 331 >gi|148257236|ref|YP_001241821.1| putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. BTAi1] gi|146409409|gb|ABQ37915.1| Putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. BTAi1] Length = 495 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 24/89 (26%), Gaps = 13/89 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 GL C+ CP + A + ++ RD R+ + Sbjct: 226 AGTTYGLAGFAREQVCTFMCPWPRLQG-------AIWDAEAFTVNYRDYRGEVRMSAKKA 278 Query: 221 PF----RL--YRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 279 AEARSQGLPAGDCVDCGACVAVCPIGIDI 307 >gi|326387130|ref|ZP_08208740.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208311|gb|EGD59118.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 494 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 23/79 (29%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP ++++ W + R + + E L Sbjct: 212 FALGGFMREQVCIYMCPWPRIQGAMLDEKSLIVTYKHWRGEPRGSLKASQKRVEEGLPPL 271 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 272 GDCIDCKQCEAVCPTGIDI 290 >gi|304395180|ref|ZP_07377064.1| formate dehydrogenase, alpha subunit [Pantoea sp. aB] gi|304357433|gb|EFM21796.1| formate dehydrogenase, alpha subunit [Pantoea sp. aB] Length = 990 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 27/105 (25%), Gaps = 19/105 (18%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H I+ + P +C++C C +C + + L Sbjct: 118 DMHIPIQYYPHQPKPYAKDHSNPF-----YTYDPDQCILCGRCVEACQNVEV--NETLSI 170 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R L D E G C + +C CP Sbjct: 171 DYTQAHPRVLWDGGTEIAGS------------SCVSCGHCVTVCP 203 >gi|300773294|ref|ZP_07083163.1| FAD linked oxidase domain protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759465|gb|EFK56292.1| FAD linked oxidase domain protein [Sphingobacterium spiritivorum ATCC 33861] Length = 972 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 15/124 (12%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + K +D + +C C T CPS+ Sbjct: 534 RYDNNDNRTEIKTYFDFSKDESILRLAEKCSGSGDCRKTEITGGTMCPSFMATRREKDTT 593 Query: 194 AILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R +L +S Q R D+ E + C + C CP ++ AK+K Sbjct: 594 RARANVLRQFLTNS---TQTNRFDHEELKEVMDLCLSCKGCKTECPSSVDV----AKMKA 646 Query: 253 MLLD 256 L Sbjct: 647 EFLQ 650 >gi|227536863|ref|ZP_03966912.1| possible bifunctional FAD/FMN dehydrogenase/Fe-S oxidoreductase [Sphingobacterium spiritivorum ATCC 33300] gi|227243290|gb|EEI93305.1| possible bifunctional FAD/FMN dehydrogenase/Fe-S oxidoreductase [Sphingobacterium spiritivorum ATCC 33300] Length = 600 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 15/124 (12%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGP 193 + + K +D + +C C T CPS+ Sbjct: 162 RYDNNDNRTEIKTYFDFSKDESILRLAEKCSGSGDCRKTEITGGTMCPSFMATRREKDTT 221 Query: 194 AILLQAYR-WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R +L +S Q R D+ E + C + C CP ++ AK+K Sbjct: 222 RARANVLRQFLTNS---TQTNRFDHEELKEVMDLCLSCKGCKTECPSSVDV----AKMKA 274 Query: 253 MLLD 256 L Sbjct: 275 EFLQ 278 >gi|220934308|ref|YP_002513207.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thioalkalivibrio sp. HL-EbGR7] gi|219995618|gb|ACL72220.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thioalkalivibrio sp. HL-EbGR7] Length = 375 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 22/115 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPS-YWWNSDRYLGPAILLQAYRWLIDS----------- 206 E + C+ CA C+ CP+ + + L DS Sbjct: 249 EHPRWAQTAERCLSCANCTLVCPTCFCAQMEELPDLEGNASERVRLWDSCFNGEHSYMIG 308 Query: 207 ---RDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R L + C C CP G++ + +A I+ Sbjct: 309 GPHRSTVAARYRQWLTHKLSTWHTQFGSSGCVGCGRCITWCPVGIDITEEVAAIR 363 >gi|71906800|ref|YP_284387.1| electron transport complex protein RnfC [Dechloromonas aromatica RCB] gi|71846421|gb|AAZ45917.1| Electron transport complex, RnfABCDGE type, C subunit [Dechloromonas aromatica RCB] Length = 570 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 18/85 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C C+ +CP L P + R + Sbjct: 362 FPPKPPEMPCIRCGECARACP-------HELQPFEMYWFSRAKNFGK-----------TQ 403 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ C C+ CP + + Sbjct: 404 EYAIFDCIECGCCSFVCPSRIPLVQ 428 >gi|192358987|ref|YP_001984163.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] gi|190685152|gb|ACE82830.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] Length = 468 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ D+R + L C C Q Sbjct: 218 CLHMCPYARFQSVMFDRDTLVVAYNAARGDTRGSRKKGDDPQAL---GLGDCVDCYLCVQ 274 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 275 VCPTGIDIRD 284 >gi|332674023|gb|AEE70840.1| oxidoreductase [Helicobacter pylori 83] Length = 946 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEYLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRL--YRCHTIM 231 PS D L P + +R + E + + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSQGHHEDKVLLDELLKESEYLAHDTCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSTLCPLGIDTGKI 627 >gi|331011102|gb|EGH91158.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 470 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|307721742|ref|YP_003892882.1| NADH dehydrogenase subunit I [Sulfurimonas autotrophica DSM 16294] gi|306979835|gb|ADN09870.1| NADH dehydrogenase subunit I [Sulfurimonas autotrophica DSM 16294] Length = 205 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 29/114 (25%), Gaps = 18/114 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V + + + P + R C+ C C C S Sbjct: 48 LWVVLREMIRFDTHTVKYPEEKMPIGPRYRAVHEMKRLWESDTERCIGCGLCEKICISDC 107 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D R +SR E ++ L RC C + CP Sbjct: 108 IRIDT-----------RIDENSRKEVSEYTIN-------LGRCIFCGYCAEVCP 143 >gi|289678933|ref|ZP_06499823.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. syringae FF5] Length = 428 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 225 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 280 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 281 QVCPTGIDIRD 291 >gi|297587688|ref|ZP_06946332.1| Na(+)-translocating NADH-quinone reductase subunit A [Finegoldia magna ATCC 53516] gi|297574377|gb|EFH93097.1| Na(+)-translocating NADH-quinone reductase subunit A [Finegoldia magna ATCC 53516] Length = 442 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 27/100 (27%), Gaps = 18/100 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + +E + C+ CA C CP + LQ D + Sbjct: 353 IFMNEKDATLASPEPCIKCAKCVDVCPIGLLP--------LFLQLKSLNGDFEGAEK--- 401 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C+ CP +AI K L Sbjct: 402 -------MHLNDCIECGTCSYVCPSNRPLVEAIVHAKTQL 434 >gi|77919232|ref|YP_357047.1| NAD-reducing iron-only hydrogenase large subunit [Pelobacter carbinolicus DSM 2380] gi|77545315|gb|ABA88877.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Pelobacter carbinolicus DSM 2380] Length = 585 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 57/215 (26%), Gaps = 54/215 (25%) Query: 56 GPMVLDGLLYIKNKIDPTLTL------RRSCREGICGSCGMNIDGTNTLACVKDMKDIK- 108 G +LD + I PTL + + C C + ++ LA + Sbjct: 18 GSTILDAAKKLDVHI-PTLCFLQMDEMKFNNMTASCRICVVEVEKRRNLAPACATPVMDG 76 Query: 109 ---GAIAVYPLPHMSVI---------KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + L + KD +V + +++ + A + Sbjct: 77 MVVKTNTIRVLNARRSVLELMLSDHPKDCLVCAKSGDCELQNLAEYFGIREVGVAGAMST 136 Query: 157 SHEDRQKI--DGLYECVMCACCSTSCPSYWWNS---------DRYLGPAILLQAYRWLID 205 ED + +C++C C T C D + PA + Y + Sbjct: 137 YREDVSPSIIRDMDKCILCRRCETMCNDVQTCGVLSGVNRGFDAVVAPAFEMNLYDTV-- 194 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 C CT CP G Sbjct: 195 ---------------------CTNCGQCTAVCPVG 208 >gi|41406193|ref|NP_959029.1| NADH dehydrogenase subunit I [Mycobacterium avium subsp. paratuberculosis K-10] gi|81700783|sp|Q744Z4|NUOI1_MYCPA RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|41394541|gb|AAS02412.1| NuoI_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 175 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 14/121 (11%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + +I V S + + + A H+ + DGL +C+ C C+ Sbjct: 4 FLKLIAGFRVTFSAMFK--KPVTEGYPEKPGPVAPRYHGRHQLNRWPDGLEKCIGCELCA 61 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ ++ A +A R+ GER + L RC C ++C Sbjct: 62 WACPA----DAIFVESADNTEAERFSP-------GERYGRVYQINYL-RCIGCGFCIEAC 109 Query: 238 P 238 P Sbjct: 110 P 110 >gi|222824432|ref|YP_002576006.1| NADH-quinone oxidoreductase, G subunit [Campylobacter lari RM2100] gi|222539653|gb|ACM64754.1| NADH-quinone oxidoreductase, G subunit [Campylobacter lari RM2100] Length = 817 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 62/217 (28%), Gaps = 32/217 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKD-- 106 ++ + + + + P + C C C + DG +C +K+ Sbjct: 8 IECEANEGEYILNVARKNDIFIPAICYLNGCSPTLACRMCMVEADGKKVYSCNTKVKEGM 67 Query: 107 ---------IKGAIAVY-------PLPHMSVIKDLVVDMSHFYSQHR-SIEPWLKTVSPK 149 A+ PL K ++ +F + R +++ + + K Sbjct: 68 VVESDLPNLWDERNAIMQAYCINHPLQCGVCDKSGECELQNFTHKARVNVQNYWIKDTHK 127 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-----AYRWLI 204 K+ + + D C++C C T C S P Sbjct: 128 EHKKWGEINYDP------ALCIVCERCITVCKDKIGESALKTTPRGANAPDVSFKESMSK 181 Query: 205 DSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKG 240 D+ + + + + C CT CP G Sbjct: 182 DALAIWTKFQKSLITPSNGDILDCSFCGECTSVCPTG 218 >gi|323700294|ref|ZP_08112206.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio sp. ND132] gi|323460226|gb|EGB16091.1| D-lactate dehydrogenase (cytochrome) [Desulfovibrio desulfuricans ND132] Length = 940 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 32/94 (34%), Gaps = 12/94 (12%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLED 220 D + C+ C C CPS L P + AYR + SR E E D Sbjct: 536 DDMIDRCIECGFCEPVCPSRTLT----LTPRQRIVAYREI--SRREQAGDAAETKKAFHD 589 Query: 221 PFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIK 251 F T C CP ++ K I + + Sbjct: 590 SFDYDGEATCAADGLCGTRCPVAIDTGKFIKQYR 623 >gi|269120526|ref|YP_003308703.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Sebaldella termitidis ATCC 33386] gi|268614404|gb|ACZ08772.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Sebaldella termitidis ATCC 33386] Length = 444 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 18/146 (12%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P+ V +D + + + ++ + + + E + C+ C Sbjct: 204 PMMGKIVHRDELAEKAV----IKTTGALIILPEDHYVIKRKERPEAHILNESRAACIQCR 259 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C+ CP Y L P +++A E E L C C Sbjct: 260 MCTDMCPRYLIGHK--LRPHRVMRAM-----GMGEQDEEILKEALI------CCECNVCE 306 Query: 235 -QSCPKGLNPAKAIAKIKMMLLDRKI 259 +CP G++P +K + ++ + Sbjct: 307 LFACPMGISPKSTNTYLKGVFREKGV 332 >gi|256829008|ref|YP_003157736.1| iron-sulfur cluster binding protein [Desulfomicrobium baculatum DSM 4028] gi|256578184|gb|ACU89320.1| iron-sulfur cluster binding protein [Desulfomicrobium baculatum DSM 4028] Length = 481 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 49/199 (24%), Gaps = 33/199 (16%) Query: 79 SCREGICGSCGMNI---DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 S C G + N + + + + D+++ M + Sbjct: 203 SGGNTACAETGHVTIVSNEGNIRMATTMPRVHVVLLGIEKIAATLEDHDILLRMLTRAAA 262 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQ---------------KIDGLYECVMCACCSTSC 180 + I ++ V E E+ + CV C C C Sbjct: 263 GQKISTYVSYVGGPRLDEEPDGPEEFHLVLVDNGRSRILADPDFREVLHCVRCGGCLNVC 322 Query: 181 PSYWWNSDR-YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC---HTIMNCTQS 236 P Y Y P + ++ L C C Q Sbjct: 323 PVYMAIGGHSYGSPYCGPIGAVFTPLTQGINTCHHL-----------CQGETLCGACKQV 371 Query: 237 CPKGLNPAKAIAKIKMMLL 255 CP + + ++ ++ L Sbjct: 372 CPVDNDLPRMLSLLRFKLA 390 >gi|160898495|ref|YP_001564077.1| D-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] gi|160364079|gb|ABX35692.1| D-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] Length = 1032 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 54/201 (26%), Gaps = 32/201 (15%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP 115 GP + + L IK DP I T + + + P Sbjct: 519 GPAITEALRAIKQHFDPDSLFNPG-----------KIIDTPKMDDGRLFRFAPAD---TP 564 Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 P+ V V+D S + Q + + C Sbjct: 565 RPYRRVPITPVLDWSAWNVQADPVTEITTAPGTGGDVTG-------GFAKAVEMCNNNGH 617 Query: 176 CS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 C T CPSY D R I + + L D L C Sbjct: 618 CRKFDAGTMCPSYRVTRDEQHLTRGRANTLRLAISGQLGPDAFTSEALHDTMDL--CVGC 675 Query: 231 MNCTQSCPKGLNPAKAIAKIK 251 C + CP G++ +A++K Sbjct: 676 KGCRRDCPTGVD----MARMK 692 >gi|148653545|ref|YP_001280638.1| cytochrome c oxidase cbb3 type, accessory protein FixG [Psychrobacter sp. PRwf-1] gi|148572629|gb|ABQ94688.1| Cytochrome c oxidase cbb3 type, accessory protein FixG [Psychrobacter sp. PRwf-1] Length = 468 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 27/102 (26%), Gaps = 5/102 (4%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P + + C CP Y L+ +Y + Sbjct: 187 IPFPDWPGWVWVSMFIFTFATYANAAYMREFMCIHICP-YGRFQSVMFDKDTLIVSYDYN 245 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R E +G R P L C C Q CP G++ Sbjct: 246 ---RGEPRGTRKKGTH-PEHLGDCIDCTMCVQVCPTGIDIRD 283 >gi|32267094|ref|NP_861126.1| NADH dehydrogenase subunit I [Helicobacter hepaticus ATCC 51449] gi|81665422|sp|Q7VFT0|NUOI_HELHP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|32263146|gb|AAP78192.1| donor-ubiquinone reductase I [Helicobacter hepaticus ATCC 51449] Length = 212 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 33/120 (27%), Gaps = 19/120 (15%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + + L + F+S +I + +P + R C+ C C Sbjct: 35 LDLFSGLKTALGAFFSPKVTIH-YPLESAPLSPRYRAIHKLQRLLESENERCIGCGLCEK 93 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 C S R + D+ + R L RC C + CP Sbjct: 94 ICTSNCI---------------RII---TDKGEDGRKKILNYSINFGRCIYCGLCAEVCP 135 >gi|194333784|ref|YP_002015644.1| FAD linked oxidase domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311602|gb|ACF45997.1| FAD linked oxidase domain protein [Prosthecochloris aestuarii DSM 271] Length = 1221 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLED 220 + C+ C C T C Y+ + P A L D++ E + + Sbjct: 777 KIDYCIRCGKCKTDCCVYYPARGMFYHPRNKNLAIGSLIEAMLYDAQRERKTDFELLRWL 836 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ + Sbjct: 837 EEVADHCTICHKCLKPCPVDIDTGEV 862 >gi|284039496|ref|YP_003389426.1| D-lactate dehydrogenase (cytochrome) [Spirosoma linguale DSM 74] gi|283818789|gb|ADB40627.1| D-lactate dehydrogenase (cytochrome) [Spirosoma linguale DSM 74] Length = 1034 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 9/104 (8%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGPAILLQAYR 201 K + +D ++ +C C T CPSY + R Sbjct: 576 PQPKTVFDFSKDGGLLELAEKCSGSGDCRKTEITGGTMCPSYMATRREHDTTRARANILR 635 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 S ++ + ++D L C + C CP ++ + Sbjct: 636 HFYSSTEKPVESDYEAVKDV--LDLCLSCKACKAECPSSVDMTR 677 >gi|10802737|gb|AAG23590.1|AF244641_1 heterodisulfide reductase subunit C [Carboxydothermus hydrogenoformans] Length = 99 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 13/92 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +++ L +C C C+ CP + P ++ S+ E L Sbjct: 19 EKESGQHLRDCYQCGKCTAGCPVAYAMDYT---PNQIMHL------SKIGIGEEVLR--- 66 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ++ C + CT CPK ++ A+ + ++ Sbjct: 67 -SRTIWICASCNTCTTRCPKNIDIARVMDSLR 97 >gi|306821256|ref|ZP_07454869.1| pyruvate:ferredoxin oxidoreductase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550697|gb|EFM38675.1| pyruvate:ferredoxin oxidoreductase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 1179 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 5/88 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + C+ C C+ CP YL D+ + G Sbjct: 673 YEKRGIATHVPEWKIENCIQCNQCAFVCP--HAAIRPYLLDEKQKADAPEGFDTL-KAVG 729 Query: 213 ERLDNLEDPFRL--YRCHTIMNCTQSCP 238 + L+ LE ++ Y C NC CP Sbjct: 730 KGLEGLEYRIQVSPYDCTGCGNCVDVCP 757 >gi|241667630|ref|ZP_04755208.1| cytochrome c3 hydrogenase alpha (or beta) chain [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 366 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 25/142 (17%) Query: 134 SQHRSIEPWLKTVSPKPAKELL---QSHEDRQKIDGLYECVMCACCSTSCPS---YWWNS 187 + +++ + P A+ S++ Q D C+ C C+ SCP+ + Sbjct: 221 QKIKAVYAMQEKTLPPIAQVEKALTSSYDHPQWDDVAERCLSCGSCTQSCPTCFCHTEKE 280 Query: 188 DRYLGPAILLQAYRW-----LIDS-------RDEFQGERLDNLEDPFRLYR-------CH 228 + L W L S R+E + L F +R C Sbjct: 281 EPSLDGKESEHTREWDSCFGLDHSYTHGELYREEPKHRYRQWLTHKFGTWREQFKTKGCV 340 Query: 229 TIMNCTQSCPKGLNPAKAIAKI 250 C CP ++ + I I Sbjct: 341 GCGRCITWCPVKIDVTEEINAI 362 >gi|152981534|ref|YP_001352125.1| glycolate oxidase subunit [Janthinobacterium sp. Marseille] gi|151281611|gb|ABR90021.1| glycolate oxidase subunit [Janthinobacterium sp. Marseille] Length = 1000 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + + L + E Sbjct: 589 EMCNNNGHCRKFDADTMCPSYRITKDERHVTRGRANTLRLAISGQ--LGDDGLASAEVKE 646 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + R Sbjct: 647 VLDLCVSCKGCKRDCPTGVDMAKVKIEARAAWASR 681 >gi|113867078|ref|YP_725567.1| NADH dehydrogenase subunit I [Ralstonia eutropha H16] gi|194289167|ref|YP_002005074.1| NADH dehydrogenase subunit i [Cupriavidus taiwanensis LMG 19424] gi|123033156|sp|Q0KCS2|NUOI_RALEH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737389|sp|B3R3X5|NUOI_CUPTR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|113525854|emb|CAJ92199.1| NADH dehydrogenase chain I [Ralstonia eutropha H16] gi|193223002|emb|CAQ69007.1| NADH:ubiquinone oxidoreductase complex I, chain I [Cupriavidus taiwanensis LMG 19424] Length = 163 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 31 RKITVQFPEEKTPISPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESDARADGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 91 RRTTRYDID------------------LTKCIFCGFCEEACPVD 116 >gi|330940654|gb|EGH43680.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 470 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ +R E +G R + L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIIS----YDQNRGEARGPRRKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|329851617|ref|ZP_08266374.1| cytochrome c oxidase accessory protein CcoG [Asticcacaulis biprosthecum C19] gi|328840463|gb|EGF90035.1| cytochrome c oxidase accessory protein CcoG [Asticcacaulis biprosthecum C19] Length = 470 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 40/155 (25%), Gaps = 16/155 (10%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS--IEPWLKTVSP 148 +D K + AI + VI L FY E + P Sbjct: 130 RLDDGPWTLEKIGKKTLTHAIWL-------VIGALTGGAWVFYFNDAPTLAEGLVHLDLP 182 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + C CP Y L+ +Y R Sbjct: 183 ASVWSWIVAL--TLSTYFMAGFARENICKYVCP-YARFQSAMFDRDTLIISY---AHERG 236 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 E +G+ + C +C CP G++ Sbjct: 237 EPRGKHKRG-DSWEGRGHCIDCDSCVVVCPMGIDI 270 >gi|296128462|ref|YP_003635712.1| FAD linked oxidase domain protein [Cellulomonas flavigena DSM 20109] gi|296020277|gb|ADG73513.1| FAD linked oxidase domain protein [Cellulomonas flavigena DSM 20109] Length = 997 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 10/89 (11%) Query: 162 QKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ CV C CPSY D + + + + +G Sbjct: 532 DMTTAVHRCVGVGKCRADNHAAGGFMCPSYLATKDEKDSTRGRARVLQEMANGSLVSRGW 591 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + L C + C+ CP G++ Sbjct: 592 SSREVH--ESLDLCLSCKACSSDCPAGVD 618 >gi|229825893|ref|ZP_04451962.1| hypothetical protein GCWU000182_01257 [Abiotrophia defectiva ATCC 49176] gi|229789913|gb|EEP26027.1| hypothetical protein GCWU000182_01257 [Abiotrophia defectiva ATCC 49176] Length = 325 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 24/88 (27%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C+ C +L + +RL L+ Sbjct: 6 HTDASKCINCHLCTKHC--------SFLTKYGITI-----------GDVDRLRELK---- 42 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C CT+ CPK ++ + I ++ Sbjct: 43 -YSCFLCGECTRVCPKDIDGRQIILDMR 69 >gi|189468080|ref|ZP_03016865.1| hypothetical protein BACINT_04474 [Bacteroides intestinalis DSM 17393] gi|189436344|gb|EDV05329.1| hypothetical protein BACINT_04474 [Bacteroides intestinalis DSM 17393] Length = 170 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + + + + C+ C C +CP+ Sbjct: 25 MKTTMTVFCRRKVTEQYPENRATLEMFDRFRGTLTMPHNERNEHHCIACGLCQIACPN-- 82 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ +I++ D + + L + L C C +CP G Sbjct: 83 ----------DTIKVTSEMIETEDGKKKKILAKY--EYDLGSCMFCQLCVTACPHG 126 >gi|78042869|ref|YP_360850.1| heterodisulfide reductase iron-sulfur subunit domain-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77994984|gb|ABB13883.1| heterodisulfide reductase, iron-sulfur subunit domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 890 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 6/91 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + ++ Y C C C T+C + + P E E + +L Sbjct: 488 AEMVEESYICAQCGFCRTNCTVFMPDPWESNSPRGKWYLLNQYAKGEIELSEELVSSLV- 546 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C T C C L A+ ++ Sbjct: 547 -----LCTTCKKCNVVCQTNLPNAERWIGLR 572 >gi|134301029|ref|YP_001114525.1| hypothetical protein Dred_3198 [Desulfotomaculum reducens MI-1] gi|134053729|gb|ABO51700.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfotomaculum reducens MI-1] Length = 464 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSR-----DE 209 R + C C C+ +C +Y D P R + + + Sbjct: 48 RSLMITFEACTKCGACAENCHTYLGTRDPNNIPTNRADLLRKVYKRYFTPEGKFFPKLIG 107 Query: 210 FQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + L++LE F Y+C+ C+ +CP GL+ + + +L Sbjct: 108 AKDLELEDLEKMFSYFYQCNECRRCSLACPFGLDTCEITMAGRQLL 153 >gi|325473842|gb|EGC77030.1| Fe-hydrogenase large subunit family protein [Treponema denticola F0402] Length = 500 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 18/89 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C+ C C +CP + P +A S+DE ER+D ++C Sbjct: 155 EKCINCGICLKNCPYHAVIK----IPVPCEEACPVGAISKDENGKERIDY-------HKC 203 Query: 228 HTIMNCTQSCP------KGLNPAKAIAKI 250 NC + CP KG I + Sbjct: 204 IFCGNCMRECPFGAMMDKG-QIVDVIKHL 231 >gi|194442756|ref|YP_002041320.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401419|gb|ACF61641.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 451 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNICESVACPVGISPMRINRMLKREL 337 >gi|161613340|ref|YP_001587305.1| hypothetical protein SPAB_01051 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362704|gb|ABX66472.1| hypothetical protein SPAB_01051 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 451 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPQLLLSALT-------CSECNICESVACPVGISPMRINRMLKREL 337 >gi|148244397|ref|YP_001219091.1| NADH dehydrogenase subunit I [Candidatus Vesicomyosocius okutanii HA] gi|156633542|sp|A5CXG5|NUOI_VESOH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|146326224|dbj|BAF61367.1| NADH dehydrogenase I chain I [Candidatus Vesicomyosocius okutanii HA] Length = 163 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I + H R+ +G C+ C C CP+ + + Sbjct: 31 KKITVQFPEERTPISPRFRGLHALRRYPNGEERCIACKLCEAVCPANAITIESKM----- 85 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RD+ R D L++C C ++CP Sbjct: 86 ----------RDDGT--RRTTQYDID-LFKCIFCGFCEEACPVD 116 >gi|116751507|ref|YP_848194.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700571|gb|ABK19759.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 264 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 17/29 (58%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 L+RC NCT++CP G+ I+ IK Sbjct: 131 LFRCVACNNCTKACPMGVEVLDYISAIKQ 159 >gi|254876175|ref|ZP_05248885.1| cytochrome c3 hydrogenase alpha chain [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842196|gb|EET20610.1| cytochrome c3 hydrogenase alpha chain [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 378 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 25/142 (17%) Query: 134 SQHRSIEPWLKTVSPKPAKELL---QSHEDRQKIDGLYECVMCACCSTSCPS---YWWNS 187 + +++ + P A+ S++ Q D C+ C C+ SCP+ + Sbjct: 233 QKIKAVYAMQEKTLPPIAQVEKALTSSYDHPQWDDVAERCLSCGSCTQSCPTCFCHTEKE 292 Query: 188 DRYLGPAILLQAYRW-----LIDS-------RDEFQGERLDNLEDPFRLYR-------CH 228 + L W L S R+E + L F +R C Sbjct: 293 EPSLDGKESEHTREWDSCFGLDHSYTHGELYREEPKHRYRQWLTHKFGTWREQFKTKGCV 352 Query: 229 TIMNCTQSCPKGLNPAKAIAKI 250 C CP ++ + I I Sbjct: 353 GCGRCITWCPVKIDVTEEINAI 374 >gi|213416638|ref|ZP_03349782.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 209 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 13/47 (27%) Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 D + D L C C +CP + I + + Sbjct: 32 DGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 78 >gi|315923942|ref|ZP_07920170.1| Fe-S oxidoreductase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622782|gb|EFV02735.1| Fe-S oxidoreductase [Pseudoramibacter alactolyticus ATCC 23263] Length = 380 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 13/128 (10%), Positives = 31/128 (24%), Gaps = 13/128 (10%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + + + + + + + C C C CP Sbjct: 257 MSTLEQMDDNLSYMRAFKPLSYEEQRV--IAQAQQAIADIDSISCTACHYCMPGCPINMP 314 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR--LYRCHTIMNCTQSCPKGLNP 243 D + + ++ E D C C +CP+ + Sbjct: 315 IPDIFTAMNKEILYHKT------EDAKVAYAFATDKAGTRASDCIACGQCEDACPQNI-- 366 Query: 244 AKAIAKIK 251 I++++ Sbjct: 367 -HVISRLR 373 >gi|303247818|ref|ZP_07334086.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] gi|302490719|gb|EFL50620.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] Length = 766 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 14/133 (10%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-SYWW 185 V + Y+ + + + + ED + C C C + Sbjct: 269 VTTTRTYTNLKGVPAVARV--EPADPVAGFAPEDAKTEAARCMQCDCMECVKVCEYLKHY 326 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L + ++ L+ + D C CT+ CP+ + A+ Sbjct: 327 KGYPKLYARQIYNNLSIVL------GNHYLNRMID-----SCTLCGLCTEVCPEDFSMAE 375 Query: 246 AIAKIKMMLLDRK 258 + ++ R Sbjct: 376 LCLHSRRDMVKRG 388 >gi|253682010|ref|ZP_04862807.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum D str. 1873] gi|253561722|gb|EES91174.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum D str. 1873] Length = 1168 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 5/96 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP + + +GE+L + Sbjct: 681 PEWSMENCIQCNQCSYVCPHAVIRPSLLTEEEYNNKPEGFKAIEAKGLKGEKLYYSMNV- 739 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C NC + CP P KA+ +K K Sbjct: 740 SVLDCTGCGNCAEVCPA---PTKALV-MKPAATQEK 771 >gi|257064476|ref|YP_003144148.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792129|gb|ACV22799.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 341 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 21/116 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL-------------IDSRD 208 D +C+ C C+ CP+ + L ++ W + R Sbjct: 217 WDDLSVKCLNCGTCTYVCPTCHCFDISQDLKMKEGVRFRCWDSCMFSEYTAMAGGHNPRP 276 Query: 209 EFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 + + + C C + CP L+ + I + + Sbjct: 277 TKKERVRNRFMHKLNFFERRYGMSLCVGCGRCVEKCPVALDITRLIDDVGSLAAAE 332 >gi|190348547|gb|EDK41017.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 233 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + M F+ + + H R+ G C+ C C Sbjct: 86 EIARGMYICMEMFFR--APYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 143 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 144 CPAQAITIEAEERADGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 185 Query: 240 G 240 Sbjct: 186 D 186 >gi|167837459|ref|ZP_02464342.1| formate dehydrogenase, alpha subunit [Burkholderia thailandensis MSMB43] Length = 984 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFESRVAASAD--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|16520000|ref|NP_444120.1| 4Fe-4S ferredoxin protein FdxB [Sinorhizobium fredii NGR234] gi|2494427|sp|P55678|FER3_RHISN RecName: Full=Putative ferredoxin-3; AltName: Full=Ferredoxin III; Short=FdIII gi|2182688|gb|AAB91907.1| 4Fe-4S ferredoxin protein FdxB [Sinorhizobium fredii NGR234] Length = 105 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 23/85 (27%), Gaps = 3/85 (3%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 C+ C C C S + + + D D+F GE Sbjct: 12 TWMPQYLTAIDAMTCIGCGRCFKVC-SREVMHLHGIDESGEILGACDGED--DDFAGELS 68 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 + RC C + CPK Sbjct: 69 RTIMVVDHAGRCIGCGACARVCPKN 93 >gi|258404374|ref|YP_003197116.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfohalobium retbaense DSM 5692] gi|257796601|gb|ACV67538.1| membrane-bound menaquinol oxidoreductase, cytoplasmic ferredoxin subunit [Desulfohalobium retbaense DSM 5692] Length = 534 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + R + G+ + L Sbjct: 83 RSLKVFMDTCVRCGACADKCHFFVGGGDPKNMPVLRAELLRSVYRKDFTMAGKIMSKLTG 142 Query: 221 PFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L Y+C C+ CP G++ A+ I + LL Sbjct: 143 SRVLTEDVLKEWFLYFYQCTECRRCSAYCPYGIDTAE-ITMMARELL 188 >gi|91789108|ref|YP_550060.1| NADH dehydrogenase subunit I [Polaromonas sp. JS666] gi|123164661|sp|Q127Y0|NUOI_POLSJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91698333|gb|ABE45162.1| NADH dehydrogenase subunit I [Polaromonas sp. JS666] Length = 165 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + + Sbjct: 33 RKITVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALAITIESEVRDDGS 92 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 93 RRTSRYDID------------------LTKCIFCGFCEEACPVD 118 >gi|168700377|ref|ZP_02732654.1| NADH-quinone oxidoreductase, chain I [Gemmata obscuriglobus UQM 2246] Length = 188 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 15/105 (14%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PK H + G +CV C C+T+CP++ + PA W Sbjct: 48 PEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCIDIVAAPAPAD------WQ 101 Query: 204 IDSRDEFQGE-RLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKA 246 D R+++ +D L RC C ++CP + Sbjct: 102 KDGREKYPETFVIDEL-------RCIYCGMCEEACPVDAIELTTL 139 >gi|323692710|ref|ZP_08106939.1| oxidoreductase [Clostridium symbiosum WAL-14673] gi|323503264|gb|EGB19097.1| oxidoreductase [Clostridium symbiosum WAL-14673] Length = 379 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 7/125 (5%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q P +E+ E + + C C C + CP + L Sbjct: 258 NRDQLEKNIATFAEDRPLNEEEMAAILEAADSMLDVLPCTACRYCVSHCP-------KGL 310 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 LL Y +D L++ R C +C CP+ L A A+ Sbjct: 311 DVPTLLSLYNETRFVNGLITHMAVDALDEEKRPDACAGCHSCEAVCPQQLEIAGAMKDFV 370 Query: 252 MMLLD 256 L Sbjct: 371 RKLAQ 375 >gi|312960663|ref|ZP_07775169.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] gi|311285189|gb|EFQ63764.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] Length = 469 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLYRCHTIM 231 A C CP + S + + + DS R E +G R ++ L C Sbjct: 218 AVCMHMCPYARFQSVMFDKDTLTISY-----DSARGERRGPRKRDVRPAEVGLGDCVDCQ 272 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 273 LCVQVCPTGIDIRD 286 >gi|330961259|gb|EGH61519.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 472 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + + D R E +G R + L C C Sbjct: 222 CIYMCPYARFQSVMFD---KDTLIISYDPD-RGEPRGPRKKEADHQAAGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|292494198|ref|YP_003533341.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] gi|291369161|gb|ADE01391.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] Length = 1048 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 27/100 (27%), Gaps = 10/100 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDS 206 L+ + C C C CP+Y + L R + Sbjct: 621 LEWDTENGFQGMAELCHGCGGCRGDQSTTGGVMCPTYRATEEEGLSTRGRANMLRQAMSG 680 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + + L C C + CP ++ AK Sbjct: 681 DLDADATDTEFMR--EVLDLCVGCKGCARDCPSEVDMAKL 718 >gi|257484872|ref|ZP_05638913.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 470 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|226942594|ref|YP_002797667.1| Soluble hydrogenase, alpha or beta chain [Azotobacter vinelandii DJ] gi|226717521|gb|ACO76692.1| Soluble hydrogenase, alpha or beta chain [Azotobacter vinelandii DJ] Length = 382 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 22/117 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPS-----YWWNSDRYLGPAILLQAY--RWLID---- 205 + E + + C+ CA C+ CP+ +SD G A ++ + + +D Sbjct: 255 NPEHPRWDEVAERCLACANCTMVCPTCFCTTLEDHSDLSGGSAERVRLWDSCFTLDFSYI 314 Query: 206 ---SRDEFQGERLDNLE--------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 S + R D F C C CP G++ + A I+ Sbjct: 315 HGGSVRQTDKGRYRQWMTHKLATWFDQFGSSGCVGCGRCITWCPVGIDITEEAAAIR 371 >gi|311694542|gb|ADP97415.1| iron-sulfur cluster-binding protein [marine bacterium HP15] Length = 359 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL-DNLEDPFRLYRCHTIMNCT 234 C CP Y + L+ +Y +R E +G R D+++ L C C Sbjct: 110 CFHMCP-YGRFQSSMVDADSLVISYDA---ARGEPRGSRKKDDVQVSQELGDCIDCQMCV 165 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 166 QVCPTGIDIRD 176 >gi|257388589|ref|YP_003178362.1| D-lactate dehydrogenase (cytochrome) [Halomicrobium mukohataei DSM 12286] gi|257170896|gb|ACV48655.1| D-lactate dehydrogenase (cytochrome) [Halomicrobium mukohataei DSM 12286] Length = 1023 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 31/106 (29%), Gaps = 22/106 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLI-- 204 ++ + + C C C CP+Y + A R + Sbjct: 603 MEWDNENGFQGMVELCHGCGGCRGPQETTGGVMCPTYRAAGEESTATRGRANALRQAMSG 662 Query: 205 ----DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 D DE +D + D C C + CP ++ AK Sbjct: 663 DLPADPTDEA---FVDEIMD-----LCIGCKGCAKDCPSEVDMAKL 700 >gi|293191219|ref|ZP_06609152.1| D-lactate dehydrogenase [Actinomyces odontolyticus F0309] gi|292820640|gb|EFF79609.1| D-lactate dehydrogenase [Actinomyces odontolyticus F0309] Length = 1004 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 13/125 (10%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST----- 178 +L + R + A ++ C C Sbjct: 527 ELQPGVDPLDRNLRRVAAHPMPADGGFAFTHDGGD----FTAAVHRCTGVGKCRAGVSGT 582 Query: 179 -SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CPSY D + + +S+ + + L L C C+ C Sbjct: 583 FMCPSYLATRDEKDVTRGRARILQEAANSQLVKAIDSPEVL---EALDLCLACKACSADC 639 Query: 238 PKGLN 242 P G++ Sbjct: 640 PAGVD 644 >gi|33863615|ref|NP_895175.1| aldo/keto reductase [Prochlorococcus marinus str. MIT 9313] gi|33635198|emb|CAE21523.1| Oxidoreductase, Aldo/keto reductase family; 4Fe-4S ferredoxin, iron-sulfur binding domain [Prochlorococcus marinus str. MIT 9313] Length = 378 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 37/130 (28%), Gaps = 16/130 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 +Q + + L + +L Q E R + +C C C S P R L Sbjct: 252 AQLANADGPLNQREQRALNQLRQQGERRLGENRCGQCKACLPCPKSVPIPDLLRLRNLAV 311 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCPKGLNPAKAI 247 LQA+ ER + + + C C CP L + Sbjct: 312 GHNLQAF----------TEERYNLIGRAGHWWEGIDGSACERCGECLPRCPHHLPIPDLL 361 Query: 248 AKIKMMLLDR 257 A L Sbjct: 362 ADTHQRLAAA 371 >gi|294678805|ref|YP_003579420.1| electron transport complex protein RnfC [Rhodobacter capsulatus SB 1003] gi|17380290|sp|Q52716|RNFC_RHOCA RecName: Full=Electron transport complex protein rnfC; AltName: Full=Nitrogen fixation protein rnfC gi|435525|emb|CAA51399.1| rnfC [Rhodobacter capsulatus] gi|1905810|emb|CAA72670.1| RnfC protein [Rhodobacter capsulatus] gi|294477625|gb|ADE87013.1| electron transport complex protein RnfC [Rhodobacter capsulatus SB 1003] gi|742355|prf||2009377B rnfC protein Length = 519 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP + +++R L+ L C Sbjct: 379 MPCIRCGRCVQGCPVGLTP---------------FELNARIHAGD--LEGAA-KVGLMDC 420 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+ +CP L ++ K L +R+ Sbjct: 421 LACGCCSYNCPANLPLVQSFQFAKGKLSERQ 451 >gi|330986529|gb|EGH84632.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 470 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|330976035|gb|EGH76101.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 421 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L+ +Y +R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY---DQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|300120025|emb|CBK19579.2| subunit NuoI (NDUFS8) [Blastocystis hominis] Length = 204 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + H R+ G C+ C C CP+ N + + P L Sbjct: 72 EKLTINFPHEKVTISPRMRGEHCLRRYASGEERCIACRLCEAICPAQVINIEAEMRPDGL 131 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L RC C ++CP Sbjct: 132 RRTTRYDID------------------LSRCIFCGYCQEACPVD 157 >gi|257439184|ref|ZP_05614939.1| oxidoreductase [Faecalibacterium prausnitzii A2-165] gi|257198317|gb|EEU96601.1| oxidoreductase [Faecalibacterium prausnitzii A2-165] Length = 173 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 8/86 (9%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN-LEDPFRLYRCH 228 C C C CP D + + + + E + + D + C Sbjct: 92 CTGCRYCMP-CPMGVDIPDNFSIWN------KLGMFGQPEAIKHQWEAHFPDAEKASHCV 144 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C +CP+ L A+A+++ L Sbjct: 145 RCGKCEAACPQHLPIRNALARLQQEL 170 >gi|254168343|ref|ZP_04875188.1| hypothetical protein ABOONEI_265 [Aciduliprofundum boonei T469] gi|289595761|ref|YP_003482457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] gi|197622624|gb|EDY35194.1| hypothetical protein ABOONEI_265 [Aciduliprofundum boonei T469] gi|289533548|gb|ADD07895.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] Length = 339 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 22/125 (17%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-----------DRYLGPAIL 196 + ++E+ + D + CV C C+ CP+ + Sbjct: 213 KRCSQEIKKKINDEIWDELGKICVSCGRCNFICPTCHCFDVRDITNLDGSEGERIRVWDS 272 Query: 197 LQAYRWLIDS----RDEFQGERLDNLEDPF-------RLYRCHTIMNCTQSCPKGLNPAK 245 Y + S R E + D F +Y C CT +C G+N + Sbjct: 273 CHLYEYAKTSAENFRKERHARVRYRVYDKFVFPVMRYGVYACTGCGRCTDACHAGINIRE 332 Query: 246 AIAKI 250 + ++ Sbjct: 333 VLRRL 337 >gi|109899874|ref|YP_663129.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas atlantica T6c] gi|109702155|gb|ABG42075.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudoalteromonas atlantica T6c] Length = 475 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C+ CP + S + + + R + Sbjct: 210 AVCTYGNAAYMREIMCTHICPYARFQSAMFDKDTFTVAYDAQRGEQRGPRSRKATREQNA 269 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 270 AKGLGDCVDCNLCVQVCPTGIDI 292 >gi|333022839|ref|ZP_08450903.1| putative oxidoreductase [Streptomyces sp. Tu6071] gi|332742691|gb|EGJ73132.1| putative oxidoreductase [Streptomyces sp. Tu6071] Length = 978 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLY 225 C+ C C +CPS+ + P + R ++ L + + Sbjct: 570 ADPCIECGFCEPTCPSHNLTTT----PRQRIVLRREMMRQPGGSAVENGLLDAYGYDAVD 625 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP G++ + + + Sbjct: 626 TCAGDSTCKLACPVGIDTGAMMKEFRHQ 653 >gi|325284680|ref|YP_004264143.1| formate dehydrogenase, alpha subunit [Deinococcus proteolyticus MRP] gi|324316169|gb|ADY27283.1| formate dehydrogenase, alpha subunit [Deinococcus proteolyticus MRP] Length = 1060 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 60/222 (27%), Gaps = 35/222 (15%) Query: 37 PDNKGNPCMDTYYVDLDNC----GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNI 92 P + + +D G +LD + ++ + C +C + I Sbjct: 56 PLHPKSGEWVEVSIDGVAYPAQLGEPLLDVINRSGTELAQVCYHPQLGPIQSCDTCTVEI 115 Query: 93 DGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL--------- 143 DG T AC ++ + SV +D + + + ++ Sbjct: 116 DGQLTRACGTPVQA-GQVVRTQTEAARSVQRDAYDRLIANHVLYCTVCDNNNGNCAVHNT 174 Query: 144 -------KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 P K + + +C++C C +C + N + Sbjct: 175 LSTLRLEHQHRPYHPKGYEKDFSNPFYRYDPDQCILCGRCVEACQNVQVNETLSINWEAE 234 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R L D P C + +C CP Sbjct: 235 QP--RVLWDG------------GKPIGESSCVSCGHCITVCP 262 >gi|318056858|ref|ZP_07975581.1| oxidoreductase [Streptomyces sp. SA3_actG] gi|318075893|ref|ZP_07983225.1| oxidoreductase [Streptomyces sp. SA3_actF] Length = 978 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLY 225 C+ C C +CPS+ + P + R ++ L + + Sbjct: 570 ADPCIECGFCEPTCPSHNLTTT----PRQRIVLRREMMRQPGGSAVENGLLDAYGYDAVD 625 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP G++ + + + Sbjct: 626 TCAGDSTCKLACPVGIDTGAMMKEFRHQ 653 >gi|303245362|ref|ZP_07331646.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfovibrio fructosovorans JJ] gi|302493211|gb|EFL53073.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfovibrio fructosovorans JJ] Length = 1213 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L + D+ E L L Sbjct: 682 PHWIKENCIQCNQCSFVCP--HATIRPFLADEAEMAGAPASYDTLPATGKE-LKGLSYRM 738 Query: 223 RLY--RCHTIMNCTQSCPKG 240 +++ C +C +CP Sbjct: 739 QVFPMDCMGCGSCANTCPAK 758 >gi|291556930|emb|CBL34047.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium siraeum V10Sc8a] Length = 432 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 18/81 (22%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 EC+ C C +C L P L A+ D RD RL+ L ++ Sbjct: 352 YEPSECIRCGKCVKACSMN-------LLPTELEHAF----DMRD---ARRLEKL----KV 393 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C+ CP N A+ Sbjct: 394 NLCVNCGACSFVCPAKRNLAE 414 >gi|289625916|ref|ZP_06458870.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647336|ref|ZP_06478679.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330866485|gb|EGH01194.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 470 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ +R E +G R + L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIIS----YDQNRGEARGPRKKEADPQALGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|302523339|ref|ZP_07275681.1| oxidoreductase [Streptomyces sp. SPB78] gi|302432234|gb|EFL04050.1| oxidoreductase [Streptomyces sp. SPB78] Length = 978 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLY 225 C+ C C +CPS+ + P + R ++ L + + Sbjct: 570 ADPCIECGFCEPTCPSHNLTTT----PRQRIVLRREMMRQPGGSAVENGLLDAYGYDAVD 625 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP G++ + + + Sbjct: 626 TCAGDSTCKLACPVGIDTGAMMKEFRHQ 653 >gi|220933818|ref|YP_002512717.1| cytochrome c oxidase accessory protein CcoG [Thioalkalivibrio sp. HL-EbGR7] gi|219995128|gb|ACL71730.1| cytochrome c oxidase accessory protein CcoG [Thioalkalivibrio sp. HL-EbGR7] Length = 465 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 G + C CP Y L+ +Y ++R E +G R ++ Sbjct: 203 WGNAGFMREQVCIYMCP-YARFQSAMFDRDTLIISY---DENRGEPRGSRKRGVDPKQKG 258 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 259 LGDCIDCTLCVQVCPTGIDIRDGLQY 284 >gi|254428016|ref|ZP_05041723.1| cytochrome c oxidase accessory protein CcoG [Alcanivorax sp. DG881] gi|196194185|gb|EDX89144.1| cytochrome c oxidase accessory protein CcoG [Alcanivorax sp. DG881] Length = 470 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 1/82 (1%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S + +++ + R +R + C Sbjct: 211 AGFMREQVCLYMCPYARFQSVMFDRDTLIVSYDEQRGEPRGRGAKKRQQEDTVVEK-GDC 269 Query: 228 HTIMNCTQSCPKGLNPAKAIAK 249 C Q CP G++ + Sbjct: 270 IDCGMCVQVCPTGIDIRDGLQY 291 >gi|23394377|gb|AAN31478.1| NADH dehydrogenase [Phytophthora infestans] Length = 211 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 37/147 (25%), Gaps = 20/147 (13%) Query: 96 NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH--RSIEPWLKTVSPKPAKE 153 N A K + + + D+ + H R + + Sbjct: 36 NIPAPGKQDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPR 95 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 H R+ G C+ C C CP+ + + R+ ID Sbjct: 96 FRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGARRTTRYDIDMT------ 149 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +C C ++CP Sbjct: 150 ------------KCIYCGFCQEACPVD 164 >gi|21673965|ref|NP_662030.1| oxidoreductase, FAD-binding [Chlorobium tepidum TLS] gi|21647108|gb|AAM72372.1| oxidoreductase, FAD-binding [Chlorobium tepidum TLS] Length = 1160 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C Y+ + P A L D++ E + Sbjct: 716 DYCIRCGKCKPDCCVYYPARGMFYHPRNKNLAIGSLIEALLYDAQRERSTDFKLLQWLEE 775 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C + CP ++ + + ++ +L + Sbjct: 776 VSDHCTICHKCLKPCPVDIDSGEV-SILEREILSAR 810 >gi|146297247|ref|YP_001181018.1| pyruvate/ketoisovalerate oxidoreductase, gamma subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410823|gb|ABP67827.1| pyruvate/ketoisovalerate oxidoreductase, gamma subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 339 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 24/121 (19%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 ++ I + + K + S + I +C+ C C T+CP Y + DR+L Sbjct: 219 KNAPIGGTIIEYANTITKNNITSRVGKIPIFIKEKCIHCGLCETTCPDYVFVWDRFL--- 275 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK-----GLNPAKAIAK 249 E ++ NL + C + C CP G+ I K Sbjct: 276 --------------ENGKPKMFNLGPDY--QYCKGCLRCVDVCPSGALVEGIEREHDIEK 319 Query: 250 I 250 I Sbjct: 320 I 320 >gi|167947028|ref|ZP_02534102.1| putative dehydrogenase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 197 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW-----WNSDRYL---GPAILLQAYRWLIDSRDEFQG 212 C+ C C + CP + +S ++ + +A R R Sbjct: 63 ATWGRHFDRCLRCFACRSVCPMCYCPECVVDSTTFVITPATSAEEKASRIRWCERSANTS 122 Query: 213 ERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNP 243 E L RC C + CP + Sbjct: 123 ESAVYLLTRAIHLAGRCVDCGECERVCPVNIPL 155 >gi|39995198|ref|NP_951149.1| heterodisulfide reductase, iron-sulfur binding subunit [Geobacter sulfurreducens PCA] gi|39981960|gb|AAR33422.1| heterodisulfide reductase, iron-sulfur binding subunit, putative [Geobacter sulfurreducens PCA] gi|298504202|gb|ADI82925.1| heterodisulfide reductase, iron-sulfur cluster-binding subunit, putative [Geobacter sulfurreducens KN400] Length = 334 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 25/118 (21%), Gaps = 21/118 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS---------------- 187 + L ED + C C C+ CP+ Sbjct: 204 PLDLDRIKAWLDTHFEDPLWEEIAARCAGCGACAFLCPACHCFDISDEGSEKQGARRKHW 263 Query: 188 -----DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ A + D F C C ++CP G Sbjct: 264 DACGFGKFTYHASGHNPREVQPHRYRNRIMHKFKYYHDKFGQRLCTGCGRCIRACPVG 321 >gi|323703674|ref|ZP_08115316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531389|gb|EGB21286.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 259 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 25/118 (21%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWN----------------SDRYLGPAILLQAY 200 E +C+ CA C+ CP+ D + P L Sbjct: 141 MFEHPFWDSLHEKCLGCAACTYLCPTCHCFDIADEATDCNGCRVRNWDACMFPLFTLHGS 200 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + L F + C C ++CP L+ +A+A I+ Sbjct: 201 GHN--PRPNGKARWRQRLMHKFNYFVDRYNATACVGCGRCIKNCPVNLDIRQALADIR 256 >gi|322417573|ref|YP_004196796.1| heterodisulfide reductase subunit [Geobacter sp. M18] gi|320123960|gb|ADW11520.1| heterodisulfide reductase subunit [Geobacter sp. M18] Length = 194 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 13/115 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 ++ +S + + + C C CS CP + + Sbjct: 1 MKNKSMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSTFME------HPPNR 54 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L + E + ++ C + CT CP ++ A + ++ + Sbjct: 55 VVRLLQLGQGER-------ILAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKL 102 >gi|200388299|ref|ZP_03214911.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605397|gb|EDZ03942.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 451 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C C C+ CP + + L P +L++A + + Sbjct: 247 QRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QAATPQ 301 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 302 LLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|197248972|ref|YP_002147010.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212675|gb|ACH50072.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 451 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C C C+ CP + + L P +L++A + + Sbjct: 247 QRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QAATPQ 301 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 302 LLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|146414379|ref|XP_001483160.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 233 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + M F+ + + H R+ G C+ C C Sbjct: 86 EIARGMYICMEMFFR--APYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 143 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + L + Y++ ID +C C +SCP Sbjct: 144 CPAQAITIEAEERADGLRRTYKYDIDMT------------------KCIYCGYCQESCPV 185 Query: 240 G 240 Sbjct: 186 D 186 >gi|134095897|ref|YP_001100972.1| putative D-lactate dehydrogenase [Herminiimonas arsenicoxydans] gi|133739800|emb|CAL62851.1| Putative D-lactate dehydrogenase [Herminiimonas arsenicoxydans] Length = 999 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R + + E L + + Sbjct: 589 EMCNNNGHCRKFDAGTMCPSYRITKDEKHLTRGRANTLRLALSGQ--LGAEGLASQDVKD 646 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + +++ Sbjct: 647 TLDLCVSCKGCKRDCPTGVDMAKMKIEARAAWVNK 681 >gi|332971023|gb|EGK09995.1| cytochrome c oxidase accessory protein FixG [Psychrobacter sp. 1501(2011)] Length = 477 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 27/102 (26%), Gaps = 5/102 (4%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 P + + C CP Y L+ +Y + Sbjct: 196 IPFPDWPTWVWISMFIFTFATYANAAYMREFMCIHICP-YGRFQSVMFDKDTLIVSYDYN 254 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R E +G R P L C C Q CP G++ Sbjct: 255 ---RGEPRGPRKKGTH-PETLGDCIDCTMCVQVCPTGIDIRD 292 >gi|322379664|ref|ZP_08053982.1| NADH dehydrogenase subunit G [Helicobacter suis HS5] gi|321147900|gb|EFX42482.1| NADH dehydrogenase subunit G [Helicobacter suis HS5] Length = 757 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 56/201 (27%), Gaps = 51/201 (25%) Query: 74 LTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYP---------LPHMSVIK 123 + C + C C + ++G +C K + P + V Sbjct: 1 MCYLSGCSPTVACKMCMVEVEGKRVYSCNTKPKPNTNILTNTPALKTERQMIMQTYDVNH 60 Query: 124 DLVVDM----------SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L + +P+ KP Q+ D C+MC Sbjct: 61 PLECGVCDKSGECELQDMTMRMQVDTQPFAVRDDAKPFAFWAQASYDPN------LCIMC 114 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR------- 226 C T+C D L +A + + + D+F+ +DPF ++ Sbjct: 115 ERCVTTCSDN--IGDNNL------KATKVNLHAPDKFKE---SMPKDPFSVWSRKQKGMI 163 Query: 227 -------CHTIMNCTQSCPKG 240 C C CP G Sbjct: 164 SFVGEVPCFDCGECIAVCPVG 184 >gi|322437602|ref|YP_004219692.1| formate dehydrogenase, alpha subunit [Acidobacterium sp. MP5ACTX9] gi|321165495|gb|ADW71198.1| formate dehydrogenase, alpha subunit [Acidobacterium sp. MP5ACTX9] Length = 1005 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 29/198 (14%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY- 114 G +VL +L K C +C + ++G AC + + Sbjct: 35 GELVLTAVLRDKEIPHVCYHSELMGPIQSCDTCMVEVNGELVRACGHKVAAGMTIVTESK 94 Query: 115 ------------PLPHMSVIKDLVVDMSHFYSQH--RSIEPWLKTVSPKPAKELLQSHED 160 L + + + + + + H P K + Sbjct: 95 RATSARAEAFDVILGNHMLYCTVCDNNNENCTVHNTAVAMKVEHQEHPFKPKPYDVDMSN 154 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C++C C +C + N +G + R L D + G Sbjct: 155 PFYRYDPSQCILCGRCVQACQTVQVNETLTIGWELDQP--RVLWDGGMQIGGS------- 205 Query: 221 PFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 206 -----SCVSCGHCITVCP 218 >gi|295102102|emb|CBK99647.1| electron transport complex, RnfABCDGE type, C subunit [Faecalibacterium prausnitzii L2-6] Length = 440 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 24/86 (27%), Gaps = 18/86 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + E + + C+ C C CP L P + QAY R Sbjct: 349 IMLSEATAQPPQVNPCIRCGRCVEYCPM-------GLEPVEVNQAY-----------AAR 390 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG 240 + C +CT CP Sbjct: 391 DVQELGKLHVDYCFNCGSCTFVCPAK 416 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP GL P ++ R + Sbjct: 364 CIRCGRCVEYCPMGLEPV----EVNQAYAARDV 392 >gi|261416726|ref|YP_003250409.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373182|gb|ACX75927.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326992|gb|ADL26193.1| NADH-quinone oxidoreductase, I subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 157 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 20/122 (16%) Query: 121 VIKDLVVDMSHFYSQHRSI--EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 +I L V + +F++ R + + + K E + DG C C C Sbjct: 25 LICGLSVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCER 84 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ N A R++ + C C ++CP Sbjct: 85 ACPNASINVLATKNIAGKKVLGRYV------------------YHFASCTQCGLCVEACP 126 Query: 239 KG 240 G Sbjct: 127 FG 128 >gi|46579700|ref|YP_010508.1| reductase, iron-sulfur binding subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120602820|ref|YP_967220.1| reductase, iron-sulfur binding subunit [Desulfovibrio vulgaris DP4] gi|46449115|gb|AAS95767.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563049|gb|ABM28793.1| putative sulfite reductase-associated electron transfer protein DsrK [Desulfovibrio vulgaris DP4] gi|311233495|gb|ADP86349.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio vulgaris RCH1] Length = 536 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 13/110 (11%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + R + CV C C+ C + D P + + R + G+ L Sbjct: 80 EKHRSLKLFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRRDFTTAGKLLGK 139 Query: 218 LEDPFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L +L Y+C C+ CP G++ A+ I I LL Sbjct: 140 LVGARKLDKDVVKEWFYYFYQCTECRRCSLFCPYGIDTAE-ITAIARELL 188 >gi|24372575|ref|NP_716617.1| formate dehydrogenase, alpha subunit [Shewanella oneidensis MR-1] gi|24346593|gb|AAN54062.1|AE015543_2 formate dehydrogenase, alpha subunit [Shewanella oneidensis MR-1] Length = 1428 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 22/82 (26%), Gaps = 8/82 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL---DNL 218 C+ C C C Q I DE + R+ ++ Sbjct: 643 FIQFDANRCISCGKCVDVCQQ-QSGHCAIQFAKDSYQVLPQSISPADERRAPRVGFSASM 701 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 D C NC Q CP G Sbjct: 702 ADSH----CVQCGNCVQVCPTG 719 >gi|147668873|ref|YP_001213691.1| hydrogenase, Fe-only [Dehalococcoides sp. BAV1] gi|146269821|gb|ABQ16813.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Dehalococcoides sp. BAV1] Length = 573 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 43/217 (19%), Gaps = 35/217 (16%) Query: 45 MDTYYVD----LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 M T +D G +L I C C + I+G LA Sbjct: 1 MVTLNIDNKQVTVPEGTTILQAAKEANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT 60 Query: 101 VKDMK--------------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 K + L + + R Sbjct: 61 SCSRKVAEGMKVNTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E D + + C+ C C C + A ++ Sbjct: 121 LRFEESEKRVLPIDNTSPSIIRDPNKCIACGRCVRVCHDIQT-----------VNAIGFI 169 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D +D C C CP G Sbjct: 170 NKGPDTMVATSMDR---GMGNVACANCGQCILVCPVG 203 >gi|254457275|ref|ZP_05070703.1| NADH-quinone oxidoreductase subunit i [Campylobacterales bacterium GD 1] gi|207086067|gb|EDZ63351.1| NADH-quinone oxidoreductase subunit i [Campylobacterales bacterium GD 1] Length = 204 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 28/114 (24%), Gaps = 18/114 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V M + + P + R C+ C C C S Sbjct: 47 LWVVMREMIRFDIHTVQYPEEKMPIGPRYRAVHEMKRLWESDAERCIGCGLCEKICISNC 106 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + DE R + E L RC C + CP Sbjct: 107 IRMETKI----------------DENS--RKEVSEYTINLGRCIFCGYCAEVCP 142 >gi|51892732|ref|YP_075423.1| NADH dehydrogenase I subunit I [Symbiobacterium thermophilum IAM 14863] gi|81692101|sp|Q67P14|NUOI1_SYMTH RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|51856421|dbj|BAD40579.1| NADH dehydrogenase I subunit I [Symbiobacterium thermophilum IAM 14863] Length = 162 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A HE R +GL CV C C +CP+ AI +QA D+ Sbjct: 31 KRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAA----------AITVQAAENDPDN 80 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 GER L RC C ++CP Sbjct: 81 -PHSPGERYGYKYQVDLL-RCIFCGMCEEACP 110 >gi|313893000|ref|ZP_07826577.1| pyruvate synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442353|gb|EFR60768.1| pyruvate synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 1178 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPAMGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPS--PKGKAI 766 >gi|217970625|ref|YP_002355859.1| cytochrome C oxidase accessory protein CcoG [Thauera sp. MZ1T] gi|217507952|gb|ACK54963.1| cytochrome c oxidase accessory protein CcoG [Thauera sp. MZ1T] Length = 465 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 23/89 (25%), Gaps = 8/89 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 A C CP Y + P AY D +GE L Sbjct: 203 ASFTYLQAGLAREAVCQHMCP-YSRFQGVMIDPDTANVAY-------DVKRGEPRGALRQ 254 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 255 SGDKGDCIDCGICVQVCPTGIDIRDGLQY 283 >gi|261418787|ref|YP_003252469.1| formate dehydrogenase, subunit alpha [Geobacillus sp. Y412MC61] gi|319765603|ref|YP_004131104.1| formate dehydrogenase, subunit alpha [Geobacillus sp. Y412MC52] gi|261375244|gb|ACX77987.1| formate dehydrogenase, alpha subunit [Geobacillus sp. Y412MC61] gi|317110469|gb|ADU92961.1| formate dehydrogenase, alpha subunit [Geobacillus sp. Y412MC52] Length = 987 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 31/176 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVKDM-------------KDIKGAIAVYPLPHMSVIKDLV 126 C +C ++GT AC + K + L + + + Sbjct: 44 GAIQTCDTCIAEVNGTLLRACATPVEDGMVVELGSPRAKAAQKEAMDRLLENHLLYCTVC 103 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPS 182 + + H + E P + + E C+ C C +C + Sbjct: 104 DNNNGNCKLHNTAEMMQIEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQN 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R + D C + +C CP Sbjct: 164 LQVNETLSIDWEAERP--RVVWDGGVPINES------------SCVSCGHCVTVCP 205 >gi|114320813|ref|YP_742496.1| Fe-S oxidoreductase [Alkalilimnicola ehrlichii MLHE-1] gi|114227207|gb|ABI57006.1| Fe-S oxidoreductase [Alkalilimnicola ehrlichii MLHE-1] Length = 515 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 12/107 (11%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSR-----D 208 +R + CV C C+ C + D P R + R Sbjct: 66 NRGLRVYMDACVRCGACTDKCHYFLGTGDPSNMPVARQNLMRDVYRRYFTPAGRTFPKLV 125 Query: 209 EFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D L++ F + C C+ CP G++ A+ + +L Sbjct: 126 GARDLTRDVLDEWFTYFHQCSQCRRCSVFCPYGIDTAEISMAAREIL 172 >gi|38503171|sp|Q9C4Z4|ACDA2_METTE RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 2; Short=ACDS complex subunit alpha 2; AltName: Full=ACDS complex carbon monoxide dehydrogenase 2; Short=ACDS CODH 2 gi|12408704|gb|AAG53710.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanosarcina thermophila TM-1] Length = 803 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 19/130 (14%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + Y + + P L + + D + + +CV C C+ +CP Sbjct: 372 CVMLDYEKLGELVPRLAMEMAPLREGISAIPSDEEMASLVAKCVACGECALACPEELDIP 431 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D +QA + E LD L D C C Q C K + I Sbjct: 432 DA-------IQAAK-------EGDFTALDFLHD-----LCVGCRRCEQVCNKEIPILSVI 472 Query: 248 AKIKMMLLDR 257 K + Sbjct: 473 DKAAQKAIAE 482 >gi|85707404|ref|ZP_01038485.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Roseovarius sp. 217] gi|85668060|gb|EAQ22940.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Roseovarius sp. 217] Length = 480 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + + W + R + ++ C M C Sbjct: 219 CIYACPWPRIQAAMMDEDTLTVGYREWRGEPRKNS-----EAVKAGEPQGDCIDCMACVN 273 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 274 VCPVGIDIRD 283 >gi|194291537|ref|YP_002007444.1| d-lactate dehydrogenase (cytochrome); contains glcd, fad/fmn-containing dehydrogenases; glpc, fe-s oxidoreductase [Cupriavidus taiwanensis LMG 19424] gi|193225441|emb|CAQ71387.1| putative D-lactate dehydrogenase (Cytochrome); contains GlcD, FAD/FMN-containing dehydrogenases; GlpC, Fe-S oxidoreductase [Cupriavidus taiwanensis LMG 19424] Length = 1014 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R + + G L + E Sbjct: 597 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHVTRGRANTLRLAVTGQLGTDG--LASAEVKE 654 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 L C + C + CP G++ AK + + R Sbjct: 655 ALDLCVSCKGCKRDCPTGVDMAKFKIEARHAWTRR 689 >gi|239826017|ref|YP_002948641.1| formate dehydrogenase, subunit alpha [Geobacillus sp. WCH70] gi|239806310|gb|ACS23375.1| formate dehydrogenase, alpha subunit [Geobacillus sp. WCH70] Length = 987 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 51/206 (24%), Gaps = 32/206 (15%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDI-- 107 D + ++ N P + C +C + +DG AC +KD Sbjct: 14 DYSAKQGTTILEVINENNIPHPQVCYTPELGAIQTCDTCIVEVDGKLMRACSTPVKDGMN 73 Query: 108 -----------KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + L + + + + + H ++E P + + Sbjct: 74 IELSSERAKTAQKEAMDRILENHLLYCTVCDNNNGNCKLHNTVELMGIEHQSYPYRPKVD 133 Query: 157 SHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E C+ C C C + N + R + D+ Sbjct: 134 PSEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWEAERP--RVIWDNGVPINE 191 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + C CP Sbjct: 192 S------------SCVSCGQCVTVCP 205 >gi|167751022|ref|ZP_02423149.1| hypothetical protein EUBSIR_02007 [Eubacterium siraeum DSM 15702] gi|167655940|gb|EDS00070.1| hypothetical protein EUBSIR_02007 [Eubacterium siraeum DSM 15702] Length = 432 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 18/81 (22%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 EC+ C C +C L P L A+ D RD RL+ L ++ Sbjct: 352 YEPSECIRCGKCVKACSMN-------LLPTELEHAF----DMRD---ARRLEKL----KV 393 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C+ CP N A+ Sbjct: 394 NLCVNCGACSFVCPAKRNLAE 414 >gi|118576899|ref|YP_876642.1| ferredoxin [Cenarchaeum symbiosum A] gi|118195420|gb|ABK78338.1| ferredoxin [Cenarchaeum symbiosum A] Length = 177 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Query: 168 YECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL- 224 +C C + CP Y W A + E Q ERLD + + Sbjct: 69 DDCTAEGACMSVCPVQVYQWYRTEKDTSADSALNDTYAGTGLVE-QDERLDKSDKSQPIR 127 Query: 225 -YRCHTIMNCTQSCP 238 + C M C ++CP Sbjct: 128 EHDCTQCMACQEACP 142 >gi|146307631|ref|YP_001188096.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|145575832|gb|ABP85364.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] Length = 470 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLY 225 + C CP + S + +++ D R E +G R + L Sbjct: 213 AGYLREQVCIYMCPYARFQSVMFDQDTLIVSY-----DPRRGEKRGPRKKEADYKAQGLG 267 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 268 DCIDCKMCVHVCPTGIDIRD 287 >gi|76666792|emb|CAJ31170.1| Hdr-like menaquinol-oxidizing enzyme, subunit D (HmeD) [uncultured sulfate-reducing bacterium] Length = 538 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + + D P + + R + G+ L + Sbjct: 84 RSLQLFMDICVRCGACADKCHFFIGSGDPKNMPVLRAELLRSVYRKDFTMAGKILGKVAG 143 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + Y+C C+ CP G++ A+ ++ +L Sbjct: 144 ARELTPQVLKEWFYYFYQCTECRRCSVFCPYGIDTAEITMVVRELL 189 >gi|309813234|ref|ZP_07706955.1| FAD linked oxidase, C-terminal domain protein [Dermacoccus sp. Ellin185] gi|308432830|gb|EFP56741.1| FAD linked oxidase, C-terminal domain protein [Dermacoccus sp. Ellin185] Length = 976 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 10/85 (11%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ--GERLDN 217 + C C S CPSY D + + ++ + + Sbjct: 559 HRCTGIGKCRASTIGTTNVMCPSYAATGDEKDSTRGRARLLQEMVQGGLSGGFVNDGWRS 618 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLN 242 E L C + CT CP G++ Sbjct: 619 PEVHEALDLCLSCKGCTSDCPTGID 643 >gi|21226786|ref|NP_632708.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina mazei Go1] gi|22002037|sp|Q49163|ACDA2_METMA RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 2; Short=ACDS complex subunit alpha 2; AltName: Full=ACDS complex carbon monoxide dehydrogenase 2; Short=ACDS CODH 2 gi|20905081|gb|AAM30380.1| CO dehydrogenase/acetyl-COA synthase alpha subunit [Methanosarcina mazei Go1] Length = 807 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 20/92 (21%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C +CP + +Y L+ L D C Sbjct: 415 AKCADCGACLIACPEELDIPEAMGFAKEGDYSY--------------LEGLHDI-----C 455 Query: 228 HTIMNCTQSCPKGLNPAKAIAKI-KMMLLDRK 258 C Q C K + I K+ + + + K Sbjct: 456 IGCRRCEQVCKKEIPILNIIEKVSQKQIAEEK 487 >gi|315587112|gb|ADU41493.1| oxidoreductase [Helicobacter pylori 35A] Length = 946 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLID-----SRDEFQGERL--DNLEDPFRLYR--CHTIM 231 PS D L P + +R + S + + L + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIEHLKERVSHGHNEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 Score = 38.6 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I +K + Sbjct: 540 EEHLDMCMECGFCERVCPSKDLSLTPRQRIVIHREIEHLKERV 582 >gi|609521|gb|AAC37042.1| carbon monoxide dehydrogenase large subunit [Methanosarcina mazei Go1] Length = 807 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 20/92 (21%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C +CP + +Y L+ L D C Sbjct: 415 AKCADCGACLIACPEELDIPEAMGFAKEGDYSY--------------LEGLHDI-----C 455 Query: 228 HTIMNCTQSCPKGLNPAKAIAKI-KMMLLDRK 258 C Q C K + I K+ + + + K Sbjct: 456 IGCRRCEQVCKKEIPILNIIEKVSQKQIAEEK 487 >gi|83590722|ref|YP_430731.1| ferredoxin [Moorella thermoacetica ATCC 39073] gi|83573636|gb|ABC20188.1| Ferredoxin [Moorella thermoacetica ATCC 39073] Length = 307 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 55/201 (27%), Gaps = 30/201 (14%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKDMKDIKGAIA- 112 G +L+ + I +R G C C + + G L ACV +++ + Sbjct: 18 GTTILEAARELNITIPTLCHDKRLSPFGACRLCVVEVRGRKNLPAACVTPVEEGMTVLTE 77 Query: 113 -----------VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 + L + L + S + +P +D Sbjct: 78 SPAVVEARRTIIELLLANHPLDCLTCEKSGNCRLQDYAYRYGVKRTPFEGTRDQLPLDDN 137 Query: 162 QKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C++C C +C LG A A R + D GE Sbjct: 138 NPFIIRDPNKCILCGKCVRACQEIR--GQAVLGFAFRGPATRVVP-PLDVSLGES----- 189 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 C NC CP G Sbjct: 190 ------DCVFCQNCVAVCPTG 204 >gi|330720673|gb|EGG98917.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG2C involved in Cu oxidation [gamma proteobacterium IMCC2047] Length = 329 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP Y L+ +Y D R E +G R + + L Sbjct: 72 AGWMREQVCLYMCP-YARFQSAMFDRDTLIVSY----DPERGESRGPRKKDSDYKAEGLG 126 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 127 DCIDCQVCVQVCPTGIDIRDGLQY 150 >gi|330814276|ref|YP_004358515.1| Fe-S protein, lactate dehydrogenase SO1521-like protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487371|gb|AEA81776.1| Fe-S protein, lactate dehydrogenase SO1521-like protein [Candidatus Pelagibacter sp. IMCC9063] Length = 964 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 11/129 (8%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWN 186 F S R++ + + Q D + C C CPSY Sbjct: 519 FKSDDRTLMRYKPGYKAENISTHYDWSAWGQLSDAVEMCNNNGACRKLDSGVMCPSYRVT 578 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + R + ++ + + L C + C + CP ++ Sbjct: 579 MEEKDLVRGRANTLRLALSNQLPKGSFASKEMFETMEL--CVSCKACQRECPMSVD---- 632 Query: 247 IAKIKMMLL 255 +AK+K L Sbjct: 633 MAKMKSEFL 641 >gi|291518661|emb|CBK73882.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Butyrivibrio fibrisolvens 16/4] Length = 1177 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW---LIDSRDEFQGERLDNLE 219 +C+ C C+ C Y+ ++A L D++ + + Sbjct: 690 PTWDPEKCIQCNQCAFVCS--HATIRPYMLSEDEVKAAPANIKLADTKPKASEYKYTMSV 747 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 P C CT CP G Sbjct: 748 SPL---DCMGCGECTTVCPVG 765 >gi|156935094|ref|YP_001439010.1| hypothetical protein ESA_02945 [Cronobacter sakazakii ATCC BAA-894] gi|156533348|gb|ABU78174.1| hypothetical protein ESA_02945 [Cronobacter sakazakii ATCC BAA-894] Length = 990 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 19/105 (18%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H I+ + P +C++C C +C + + L Sbjct: 118 DMHIPIQRYEYQRKPYVKDHSNPF-----YTYDPDQCILCGRCVEACQNVEV--NETLSI 170 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D + G C + +C CP Sbjct: 171 DYTMAHPRVLWDGGETIAGS------------SCVSCGHCVTVCP 203 >gi|94309880|ref|YP_583090.1| NADH dehydrogenase subunit I [Cupriavidus metallidurans CH34] gi|115502539|sp|Q1LPV5|NUOI_RALME RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|93353732|gb|ABF07821.1| NADH:ubiquinone oxidoreductase, chain I [Cupriavidus metallidurans CH34] Length = 163 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + + + Sbjct: 31 RKITVQFPEEKTPMSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAISIESDVRNDGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 91 RRTTRYDID------------------LTKCIFCGFCEEACPVD 116 >gi|218885177|ref|YP_002434498.1| reductase, iron-sulfur binding subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756131|gb|ACL07030.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 536 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + R + CV C C+ C + D P + + R + G+ L L Sbjct: 81 KHRSLKVFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRRDFTTAGKLLGKL 140 Query: 219 EDPFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +L Y+C C+ CP G++ A+ I I LL Sbjct: 141 AGARKLDKDVIKEWFYYFYQCTECRRCSLFCPYGIDTAE-ITAIARELL 188 >gi|218780675|ref|YP_002431993.1| hypothetical protein Dalk_2835 [Desulfatibacillum alkenivorans AK-01] gi|218762059|gb|ACL04525.1| Putative uncharacterized Fe-S oxidoreductase (contains cysteine-rich region domain) [Desulfatibacillum alkenivorans AK-01] Length = 388 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 16/113 (14%) Query: 156 QSHEDRQKIDGLYECVMCACCS--------TSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + + D ++ C C C T+CP Y L R ++ Sbjct: 1 MNLMEYKYKDMIHRCFRCGYCKFPTDWSDVTNCPPYARFRLESYSAGGRLWLIRAWLNGE 60 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN--PAKAIAKIKMMLLDRK 258 E+ + +Y C NC + CP N I K ++D Sbjct: 61 LEWSPNLANI------VYSCVGCKNCVEKCPHSFNDDVVNMIIAAKTAMVDEG 107 >gi|108563635|ref|YP_627951.1| NADH dehydrogenase subunit G [Helicobacter pylori HPAG1] gi|107837408|gb|ABF85277.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori HPAG1] Length = 844 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKDR---MSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|260891376|ref|ZP_05902639.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Leptotrichia hofstadii F0254] gi|260858759|gb|EEX73259.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Leptotrichia hofstadii F0254] Length = 1142 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 59/213 (27%), Gaps = 21/213 (9%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTN 96 P ++ M Y + G D + + ID + G + + Sbjct: 573 PHDEAKQYMKEY--AQKSYGRKGQDIVQKNWDAIDRGI----------DGLDEVEV--LP 618 Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 A ++ + I + ++ +L+ S + A + Sbjct: 619 EWADLEVDEKIIDDAKPEFIKKIADPINLMKGNELPVSSIIENGMVDGSFQHGTAHYEKR 678 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D C+ C C+ CP +L ++ + + G +D Sbjct: 679 GIADEVPEWQPDMCIQCNQCAYVCP--HAVIRPFLLDEEEMKKAPEGM-PTIKALGRGMD 735 Query: 217 NLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAI 247 LE ++ C C CP KAI Sbjct: 736 GLEYKIQVSPLDCTGCSACVDVCPA--PRGKAI 766 >gi|167627039|ref|YP_001677539.1| cytochrome c3 hydrogenase alpha (or beta) chain [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597040|gb|ABZ87038.1| cytochrome c3 hydrogenase alpha (or beta) chain [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 366 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 22/115 (19%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRW-----LIDS--- 206 ++ Q D C+ C C+ SCP+ + + L W L S Sbjct: 248 YDHPQWDDVAERCLSCGSCTQSCPTCFCHTEKEEPSLDGKESEHTREWDSCFGLDHSYTH 307 Query: 207 ----RDEFQGERLDNLEDPFRLYR-------CHTIMNCTQSCPKGLNPAKAIAKI 250 R+E + L F +R C C CP ++ + I I Sbjct: 308 GELYREEPKHRYRQWLTHKFGTWREQFKTKGCVGCGRCITWCPVKIDVTEEINAI 362 >gi|332528759|ref|ZP_08404736.1| NADH dehydrogenase subunit I [Hylemonella gracilis ATCC 19624] gi|332041825|gb|EGI78174.1| NADH dehydrogenase subunit I [Hylemonella gracilis ATCC 19624] Length = 180 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + Sbjct: 44 YTFARKVTLQYPEEKTPLSPRFRGLHAQRRYENGEERCIACKLCEAVCPAMAITIESDAR 103 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 104 ADGTRRTTRYDID------------------LTKCIFCGFCEEACPVD 133 >gi|319949475|ref|ZP_08023532.1| oxidoreductase [Dietzia cinnamea P4] gi|319436860|gb|EFV91923.1| oxidoreductase [Dietzia cinnamea P4] Length = 520 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 10/78 (12%) Query: 170 CVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C TS CPS+ D + + ++ + L Sbjct: 382 CIGVGRCRTSAGGVMCPSFRATGDEKDSTRGRARVLQEVVRGTIAVDDPAV-----EESL 436 Query: 225 YRCHTIMNCTQSCPKGLN 242 C C+ CP G++ Sbjct: 437 ELCLACKACSSDCPTGVD 454 >gi|225850248|ref|YP_002730482.1| putative [NiFe] hydrogenase, beta subunit [Persephonella marina EX-H1] gi|225645712|gb|ACO03898.1| putative [NiFe] hydrogenase, beta subunit [Persephonella marina EX-H1] Length = 363 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 35/125 (28%), Gaps = 12/125 (9%) Query: 130 SHFYSQHRSIEPWLKTVS--PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 S F+ + + + E+ + C PS+ Sbjct: 246 SDFWDKFNKTCLACTSCTQVCPTCFCFDIVEENDLVSMSSTRKAVWDSCFN--PSFATVH 303 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + ++ + +WL+ + D F + C C CP G++ I Sbjct: 304 RFNVRGSVASRYRQWLMH--------KFAYWTDQFGTFGCVGCGRCITWCPSGIDIRNEI 355 Query: 248 AKIKM 252 ++ Sbjct: 356 NLLRE 360 >gi|242277689|ref|YP_002989818.1| glycolate oxidase, iron-sulfur subunit [Desulfovibrio salexigens DSM 2638] gi|242120583|gb|ACS78279.1| glycolate oxidase, iron-sulfur subunit, putative [Desulfovibrio salexigens DSM 2638] Length = 382 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C CP + L P + +D + + + L C Sbjct: 7 CVQCGKCLEVCPLFKATGREELTPRAKFFLES-VCSGKDAGEELSEKDFKSLASL--CLA 63 Query: 230 IMNCTQSCPKGLNPAKAIAKIK 251 C ++CP+ ++ ++ ++ Sbjct: 64 CGRCEKNCPQHMSGPALVSDLR 85 >gi|212702079|ref|ZP_03310207.1| hypothetical protein DESPIG_00086 [Desulfovibrio piger ATCC 29098] gi|212674484|gb|EEB34967.1| hypothetical protein DESPIG_00086 [Desulfovibrio piger ATCC 29098] Length = 532 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 25/104 (24%) Query: 167 LYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLID----------------SRDE 209 + C C CS +C Y + + P + +R + + Sbjct: 101 MDYCAQCNSCSDACHLYEMSGHNEMYRPNYRSEIFRRIYKQYVKKEPLAKWRYGDMGLNW 160 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIAKI 250 RL L YRC+ C Q+CP G++ A+ I K+ Sbjct: 161 KTVARLGELA-----YRCNLCRRCAQTCPIGVDNGLIAREIRKL 199 >gi|51596577|ref|YP_070768.1| pyruvate-flavodoxin oxidoreductase [Yersinia pseudotuberculosis IP 32953] gi|153948855|ref|YP_001400778.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pseudotuberculosis IP 31758] gi|186895635|ref|YP_001872747.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51589859|emb|CAH21491.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pseudotuberculosis IP 32953] gi|152960350|gb|ABS47811.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pseudotuberculosis IP 31758] gi|186698661|gb|ACC89290.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Yersinia pseudotuberculosis PB1/+] Length = 1177 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 13/116 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMAGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDRKI 259 + D + L C C + CP KAI ++ L R + Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MRPRLEHRAV 779 >gi|291546543|emb|CBL19651.1| Predicted oxidoreductases of the aldo/keto reductase family [Ruminococcus sp. SR1/5] Length = 297 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + +++ ++ + + L + L C C C+ CP Sbjct: 172 MSNVAQMEDNLSFMKDFNGLTDSEKET--LDKAREAMSKIPLIPCTTCNYCAKVCPMEIG 229 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 S + + + + Q + L R C C + CP+ ++ + Sbjct: 230 ISGSF---TAMNYLTLYGNKAAAAHQEDWLVASHGRKRADECIKCGQCEEVCPQHISIRE 286 Query: 246 AIAKI 250 + K+ Sbjct: 287 ELEKV 291 Score = 35.5 bits (80), Expect = 7.0, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%) Query: 204 IDSRDEFQGERLDNLEDPFR---LYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + + + E LD + L C T C + CP + + + + Sbjct: 188 FNGLTDSEKETLDKAREAMSKIPLIPCTTCNYCAKVCPMEIGISGSFTAMN 238 >gi|147918974|ref|YP_687300.1| 4(4Fe-4S) polyferredoxin [uncultured methanogenic archaeon RC-I] gi|110622696|emb|CAJ37974.1| 4(4Fe-4S) polyferredoxin [uncultured methanogenic archaeon RC-I] Length = 138 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 20/105 (19%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +I W + P + + + + + C+ C C+ +CP + D L Sbjct: 18 EAICTWAHESAFNPKRGRIIVDLEFPDVHKIRICIQCGRCADACPMDAFYQDFNLLTTSE 77 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 +R D +C C Q CP + Sbjct: 78 QGIFRLDED--------------------KCVGCGECVQVCPTNV 102 >gi|323483743|ref|ZP_08089123.1| hypothetical protein HMPREF9474_00872 [Clostridium symbiosum WAL-14163] gi|323402934|gb|EGA95252.1| hypothetical protein HMPREF9474_00872 [Clostridium symbiosum WAL-14163] Length = 379 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 7/125 (5%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q P +E+ E + + C C C + CP Sbjct: 258 NRDQLEKNIATFAEDRPLNEEEMAAILEAADSMLDVLPCTACRYCVSHCP----KGLDIP 313 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L R++ +D L++ R C +C CP+ L A A+ Sbjct: 314 TLLSLYNETRFVN---GLITHMAVDALDEEKRPDACAGCHSCEAVCPQQLEIAGAMKDFV 370 Query: 252 MMLLD 256 L Sbjct: 371 RKLAQ 375 >gi|182677499|ref|YP_001831645.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beijerinckia indica subsp. indica ATCC 9039] gi|182633382|gb|ACB94156.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beijerinckia indica subsp. indica ATCC 9039] Length = 386 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 22/112 (19%) Query: 162 QKIDGLYECVMCACCSTSCPS-----YWWNSDRYLGPAILLQAY--RWLID-SRDEFQGE 213 + C+ C C+ CP+ +SD A ++ + + +D S Sbjct: 261 RWDAVAARCLTCGNCTMVCPTCFCTTVEDHSDLMGTSAERVRKWDSCFTMDFSYIHGGSV 320 Query: 214 R--------------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R L + D F C C CP G++ + A I+ Sbjct: 321 RKTGVSRYRQWMTHKLASWIDQFGTSGCVGCGRCITWCPVGIDITEETAAIR 372 >gi|322805514|emb|CBZ03078.1| pyruvate-flavodoxin oxidoreductase [Clostridium botulinum H04402 065] Length = 1172 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---------FQ 211 + +C+ C CS CP +++AY D +++ Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKSPSAFETKKAT 727 Query: 212 GERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ L+ L ++ C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|297531251|ref|YP_003672526.1| formate dehydrogenase, subunit alpha [Geobacillus sp. C56-T3] gi|297254503|gb|ADI27949.1| formate dehydrogenase, alpha subunit [Geobacillus sp. C56-T3] Length = 987 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 31/176 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVKDM-------------KDIKGAIAVYPLPHMSVIKDLV 126 C +C ++GT AC + K + L + + + Sbjct: 44 GAIQTCDTCIAEVNGTLLRACATPVEDGMVVELGSPRAKAAQKEAMDRLLENHLLYCTVC 103 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPS 182 + + H + E P + + E C+ C C +C + Sbjct: 104 DNNNGNCKLHNTAEMMQIEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQN 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R + D C + +C CP Sbjct: 164 LQVNETLSIDWEAERP--RVVWDGGVPINES------------SCVSCGHCVTVCP 205 >gi|170755927|ref|YP_001780817.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum B1 str. Okra] gi|169121139|gb|ACA44975.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum B1 str. Okra] Length = 1172 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE---------FQ 211 + +C+ C CS CP +++AY D +++ Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKSPSAFETKKAT 727 Query: 212 GERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ L+ L ++ C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|168178613|ref|ZP_02613277.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum NCTC 2916] gi|226948460|ref|YP_002803551.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A2 str. Kyoto] gi|182670715|gb|EDT82689.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum NCTC 2916] gi|226844543|gb|ACO87209.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A2 str. Kyoto] Length = 1172 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF---------Q 211 + +C+ C CS CP +++AY D +++ Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKAPSAFETKKAT 727 Query: 212 GERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ L+ L ++ C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|54024629|ref|YP_118871.1| NADH dehydrogenase subunit H [Nocardia farcinica IFM 10152] gi|81680061|sp|Q5YWD4|NUOHI_NOCFA RecName: Full=NADH-quinone oxidoreductase subunits H/I; AltName: Full=NADH dehydrogenase I subunits H/I; AltName: Full=NDH-1 subunit H/I gi|54016137|dbj|BAD57507.1| putative NADH dehydrogenase I chain H [Nocardia farcinica IFM 10152] Length = 597 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 50/143 (34%), Gaps = 21/143 (14%) Query: 96 NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 A + + KG + + PL +V + + + + A Sbjct: 400 PVPADAHRVDNPKGGL-LEPLAGFAVTA------ATMFK--KPNTEFYPEQKVPTAPRYH 450 Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 H+ + DGL +C+ C C+ +CP+ Y+ A + R+ GER Sbjct: 451 GRHQLNRHPDGLEKCIGCELCAWACPA----DAIYVEGADNTEDERYSP-------GERY 499 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP 238 + L RC C ++CP Sbjct: 500 GRVYQINYL-RCIGCGLCIEACP 521 >gi|302339821|ref|YP_003805027.1| aldo/keto reductase [Spirochaeta smaragdinae DSM 11293] gi|301637006|gb|ADK82433.1| aldo/keto reductase [Spirochaeta smaragdinae DSM 11293] Length = 378 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 60/223 (26%), Gaps = 25/223 (11%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRR---SCREGICGSCGMNID 93 P+ + YVD ++ + + + + G+ Sbjct: 161 PEVDFV-QLQINYVDWESESIQSRKCYEVARKHNKKVVVMEPVKGGTLAKVPGNVASLFK 219 Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G N + + A L + ++ + M +E + + + Sbjct: 220 GANPVMSIPSWAIRFAAS----LDGVFMVLSGMSSMEQLLDNTAYMEAFREISPEERKV- 274 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ D C C C CP + + + R +G Sbjct: 275 -IEGAVDLINASLAVPCTACRYCVDGCPQNIAIPEYF---------ALLNEEKRAGTKGS 324 Query: 214 RLDNL------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + + + + C NC +SCP+ + + ++ Sbjct: 325 SIQRVYYGNYAQTFGKASDCIACGNCEESCPQHIPIINVLKEV 367 >gi|37963675|gb|AAR05971.1| ORFS [Sphingobium indicum] Length = 476 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 12/83 (14%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L + C CP ++ L R E +G + Sbjct: 202 FVLGGFMREQLCIYMCPWPRIQTAMLDEKSLVVTYKHW--------RGEKRGSLKKAEAN 253 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 P C C CP G++ Sbjct: 254 PGAFGDCIDCNQCVAVCPTGIDI 276 >gi|85860395|ref|YP_462597.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] gi|85723486|gb|ABC78429.1| Fe-S oxidoreductase [Syntrophus aciditrophicus SB] Length = 386 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 13/84 (15%) Query: 161 RQKIDGLYECVMCACCSTS-------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + D + C C C + CPSY P + R + E E Sbjct: 1 MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENS-E 59 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSC 237 R + LY C T +C + C Sbjct: 60 RFQEI-----LYSCATCGSCVEHC 78 >gi|332994475|gb|AEF04530.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Alteromonas sp. SN2] Length = 477 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 21/83 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + S + + + R + Sbjct: 210 AVCTYANAGYMREIMCTHICPYARFQSAMFDKDTFTVSYDAKRGEQRGPRPRKLSHEQVH 269 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 270 EKGLGDCIDCNLCVQVCPTGIDI 292 >gi|310658706|ref|YP_003936427.1| electron transport complex protein [Clostridium sticklandii DSM 519] gi|308825484|emb|CBH21522.1| Electron transport complex protein [Clostridium sticklandii] Length = 442 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 18/90 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C CP+ L P + + AY D + + LD C Sbjct: 366 NCMRCAKCVNICPAN-------LQP-LFISAYSLKNDYKKAMEFRALD----------CI 407 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP ++I K +L +K Sbjct: 408 ECGSCSFVCPSARPLLQSIRVAKREILAQK 437 >gi|229171373|ref|ZP_04298958.1| formate dehydrogenase [Bacillus cereus MM3] gi|228612077|gb|EEK69314.1| formate dehydrogenase [Bacillus cereus MM3] Length = 969 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + ++G AC K+ + L + + + + Sbjct: 38 QTCDTCIVEVNGKLLRACSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNN 97 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 98 NGNCKVHNTVHMMGIEEQKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 157 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + W +D R + ++ D C + C CP Sbjct: 158 NETISID---------WNLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 196 >gi|258404552|ref|YP_003197294.1| Formate dehydrogenase [Desulfohalobium retbaense DSM 5692] gi|257796779|gb|ACV67716.1| Formate dehydrogenase [Desulfohalobium retbaense DSM 5692] Length = 382 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 18/93 (19%) Query: 166 GLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L CV C C +CP + +YLG A + + D+ F Sbjct: 254 YLAGCVNCYNCRVACPVCYCKECVFVTDVFDHRPTQYLGWANRQGSLKLPTDT-VFFHLT 312 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 RL ++ C C+ +CP + + Sbjct: 313 RLAHMSL-----SCVGCGQCSNACPNNIPVMEL 340 >gi|254514092|ref|ZP_05126153.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium NOR5-3] gi|219676335|gb|EED32700.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium NOR5-3] Length = 469 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLY 225 + C+ CP + S + +++ DS R E +G R +LE L Sbjct: 213 AGWMREQVCTYMCPYARFQSVMFDADTLIVSY-----DSARGEPRGSRKKSLEHKEAGLG 267 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 268 DCIDCELCVQVCPTGIDIRDGLQY 291 >gi|88854834|ref|ZP_01129500.1| putative oxidoreductase [marine actinobacterium PHSC20C1] gi|88815995|gb|EAR25851.1| putative oxidoreductase [marine actinobacterium PHSC20C1] Length = 955 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 10/95 (10%) Query: 156 QSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +H+D ++ CV C T CPS+ +D + + + + Sbjct: 530 FTHDDGDFATAVHRCVGVGKCRTDNTSNGGFMCPSFIATNDEKDSTRGRARVLQEMANG- 588 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 E L C + C+ CP G++ Sbjct: 589 -SLVARDWSAPEIHEALDLCLSCKACSSDCPAGVD 622 >gi|323698802|ref|ZP_08110714.1| Formate dehydrogenase [Desulfovibrio sp. ND132] gi|323458734|gb|EGB14599.1| Formate dehydrogenase [Desulfovibrio desulfuricans ND132] Length = 376 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 36/122 (29%), Gaps = 18/122 (14%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS------------YW 184 IE + + + L CV C C +CP + Sbjct: 219 AMIEVRTANRDEMFERTRAVTGTLTDLAEYLASCVNCYNCRVACPVCYCKECVFNTDVFE 278 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 +Y+G A + + D+ + R+ ++ C C+ +CP + Sbjct: 279 HKPWQYMGWAKRKGSLKMPTDT-VFYHLTRMAHMSM-----ACVGCGQCSNACPNDIPVM 332 Query: 245 KA 246 + Sbjct: 333 EL 334 >gi|294495437|ref|YP_003541930.1| aldo/keto reductase [Methanohalophilus mahii DSM 5219] gi|292666436|gb|ADE36285.1| aldo/keto reductase [Methanohalophilus mahii DSM 5219] Length = 378 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 43/131 (32%), Gaps = 6/131 (4%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + ++ + L + L++ + + +C C C CP+ Sbjct: 254 MSNLEQLKENLATANKALPNSLTEKDHALIREVREIYCDKLVVDCTGCRYCLP-CPAGVQ 312 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + Y + D+R + ++ + + C C + CP+ + + Sbjct: 313 IPLNFKY-LNNAMLYENIEDARRAYAS----HVGEERKASNCIDCGQCAERCPQEIPIPE 367 Query: 246 AIAKIKMMLLD 256 +A++ +L Sbjct: 368 MLAEVTRLLEK 378 >gi|229028382|ref|ZP_04184506.1| formate dehydrogenase [Bacillus cereus AH1271] gi|228732930|gb|EEL83788.1| formate dehydrogenase [Bacillus cereus AH1271] Length = 978 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 54/216 (25%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSTSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVKDM-------------KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C + K+ + L + + + + + H ++ Sbjct: 64 CSTKIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGVEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 NLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|150377961|ref|YP_001314556.1| cytochrome c oxidase cbb3 type accessory protein FixG [Sinorhizobium medicae WSM419] gi|150032508|gb|ABR64623.1| Cytochrome c oxidase cbb3 type accessory protein FixG [Sinorhizobium medicae WSM419] Length = 524 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 11/85 (12%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP + L + +R SR + + Sbjct: 221 YVFGGLMREQVCTYMCPWPRIQAAMLDENSL--VVTYNDWRGEPRSRHAKKSAAAGEV-- 276 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 277 ---VGDCVDCNACVAVCPMGIDIRD 298 >gi|78224614|ref|YP_386361.1| heterodisulfide reductase subunit [Geobacter metallireducens GS-15] gi|78195869|gb|ABB33636.1| heterodisulfide reductase subunit [Geobacter metallireducens GS-15] Length = 216 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 13/115 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ +S + + + C C CS CP + Sbjct: 22 RMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKCSAGCPMRSFME------HPPN 75 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R+L + + + ++ C + CT CP ++ A + ++ Sbjct: 76 RIVRFLQLGQ-------YERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRK 123 >gi|305666618|ref|YP_003862905.1| electron transport complex protein [Maribacter sp. HTCC2170] gi|88708889|gb|EAR01124.1| electron transport complex protein [Maribacter sp. HTCC2170] Length = 442 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 27/113 (23%), Gaps = 18/113 (15%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 K +L E+ C+ C+ C CP L P Sbjct: 333 MMGKAMKNTDVPITKGTSGILVISEEEASRKEAKNCIRCSQCVFVCPM-------GLEPH 385 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 +L+ + L + C +C+ CP I Sbjct: 386 LLMNL-----------SEKGLYERASKEDIMTCIECGSCSYVCPSHRPLLDYI 427 >gi|327401572|ref|YP_004342411.1| hypothetical protein Arcve_1697 [Archaeoglobus veneficus SNP6] gi|327317080|gb|AEA47696.1| hypothetical protein Arcve_1697 [Archaeoglobus veneficus SNP6] Length = 534 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 24/106 (22%) Query: 167 LYECVMCACCSTSCPSYWWNSDR------------------YLGPAILLQAYRWLID-SR 207 L C C CS +CP Y + + YL PA D Sbjct: 106 LEYCAKCHTCSEACPIYVSSGRKEIYRPTYRAEVLRRIWKRYLTPAGKTFGKFVSGDIEL 165 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + RL L YRC CTQ+CP G++ +I+ + Sbjct: 166 NGTTIMRLAELA-----YRCTLCRRCTQTCPIGVDNGLITHEIRKL 206 >gi|324516961|gb|ADY46687.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8 [Ascaris suum] Length = 207 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 20/123 (16%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + V M+HF+ + H R+ G C+ C C Sbjct: 58 FTELFRGFGVMMAHFF--MEPSTINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCE 115 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ + P + R+ ID +C C ++C Sbjct: 116 AICPAQAITIEAEERPDGSRRTTRYDIDMT------------------KCIFCGLCQEAC 157 Query: 238 PKG 240 P Sbjct: 158 PVD 160 >gi|289432125|ref|YP_003461998.1| hydrogenase, Fe-only [Dehalococcoides sp. GT] gi|288945845|gb|ADC73542.1| hydrogenase, Fe-only [Dehalococcoides sp. GT] Length = 573 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 43/217 (19%), Gaps = 35/217 (16%) Query: 45 MDTYYVD----LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 M T +D G +L I C C + I+G LA Sbjct: 1 MVTLNIDNKQVTVPEGATILQAAKEANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT 60 Query: 101 VKDMK--------------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 K + L + + R Sbjct: 61 SCSRKVAEGMKVDTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E D + + C+ C C C + A ++ Sbjct: 121 LRFEESEKRVLPIDNTSPSIIRDPNKCIACGRCVRVCHDIQT-----------VNAIGFI 169 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D +D C C CP G Sbjct: 170 NKGPDTMVATSMDR---GMGNVACANCGQCILVCPVG 203 >gi|241763296|ref|ZP_04761353.1| NADH-quinone oxidoreductase, chain I [Acidovorax delafieldii 2AN] gi|241367571|gb|EER61858.1| NADH-quinone oxidoreductase, chain I [Acidovorax delafieldii 2AN] Length = 169 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 33 YAFRRKVTVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPAMAITIESDVR 92 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 93 ADGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 122 >gi|254282045|ref|ZP_04957013.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium NOR51-B] gi|219678248|gb|EED34597.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium NOR51-B] Length = 470 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLED 220 + C+ CP + S + +++ D R E +G R + Sbjct: 209 CATYINAGWMREQVCTYMCPYARFQSVMFDRDTLIVSY-----DPERGEPRGSRKRSGNT 263 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 264 DAILGDCIDCQLCVQVCPTGIDIRDGLQY 292 >gi|158522840|ref|YP_001530710.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511666|gb|ABW68633.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 427 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 25/100 (25%), Gaps = 17/100 (17%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + D+ C+ C C CP+ + R+L Sbjct: 327 PDTDMIFVQGADQIFDVSENSCINCGDCVRICPA----------RVPVNVLIRYL----- 371 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 Q D L C C+ CP + + I Sbjct: 372 --QAGEYGEAVDSHDLLSCIDCGLCSCVCPARIPIFQYIQ 409 >gi|110589198|gb|ABG77108.1| putative dehydrogenase beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 204 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 10/93 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW-----WNSDRYL---GPAILLQAYRWLIDSRDEFQG 212 C+ C C + CP + +S ++ + +A R R Sbjct: 70 ATWGRHFDRCLRCFACRSVCPMCYCPECVVDSTTFVITPATSAEEKASRIRWCERSANTS 129 Query: 213 ERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNP 243 E L RC C + CP + Sbjct: 130 ESAVYLLTRAIHLAGRCVDCGECERVCPVNIPL 162 >gi|312898224|ref|ZP_07757615.1| electron transport complex, RnfABCDGE type, C subunit [Megasphaera micronuciformis F0359] gi|310620721|gb|EFQ04290.1| electron transport complex, RnfABCDGE type, C subunit [Megasphaera micronuciformis F0359] Length = 444 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 ++ ++ C+ C C +CP S L +A+ + Sbjct: 354 EKCQVGVEDPCIRCGRCVDACPMGLIPSQ--LSILSHCEAWDKCM--------------- 396 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + + C +C CP N + I Sbjct: 397 -EYGVMNCVECGSCVYVCPAKRNIVQYI 423 >gi|310826453|ref|YP_003958810.1| aldo/keto reductase [Eubacterium limosum KIST612] gi|308738187|gb|ADO35847.1| aldo/keto reductase [Eubacterium limosum KIST612] Length = 379 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 50/146 (34%), Gaps = 6/146 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 +Y +P ++ + + D+ + + + KE++Q + +C Sbjct: 240 LYNMPEVTCVLSGMSDLRQVQENIATAGKYTTGCLTEDEKEMIQKLRSFYRSRMRADCTG 299 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C+ CP + ++ + + N+++ F+ +C Sbjct: 300 CRYCNG-CPQIIPIPSIF-----KYYNEAFMYGDVAASRKKYRTNIKNKFKADQCTGCGQ 353 Query: 233 CTQSCPKGLNPAKAIAKIKMMLLDRK 258 C + CP+ L + + L+D Sbjct: 354 CEEHCPQNLEIRALLTEAHAFLMDEG 379 >gi|227487607|ref|ZP_03917923.1| oxidoreductase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092425|gb|EEI27737.1| oxidoreductase [Corynebacterium glucuronolyticum ATCC 51867] Length = 964 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 5/118 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ + + D CV C C + CPS + P Sbjct: 536 HGILAPDIKLTRDQKLHIKNFKSHPKIEDVANPCVECGFCESVCPSRHLTTT----PRQR 591 Query: 197 LQAYRWLI-DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + D L + C +C +CP ++ K + + M Sbjct: 592 IVIRREMARQPEDSPLLTNLLEQNAYDGIDTCAVDSSCYVACPISIDTGKMVKLFRQM 649 >gi|218288562|ref|ZP_03492839.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241219|gb|EED08394.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 986 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 49/208 (23%), Gaps = 35/208 (16%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLACVKDM- 104 LD +G ++ + L C C +C + ++G AC + Sbjct: 11 LDGSPLTATEGETILQAMLAAGLDFPHICYHPALGPIETCDTCMVEVNGDLVRACATPVV 70 Query: 105 ------------KDIKGAIAVYPLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKP 150 + + L + + + + + P Sbjct: 71 EGMSVRTKSVAARYARKEAMDRILKNHDLYCTVCDNNNGNCVVHNTTMAMDIDHQSYPFR 130 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K +C++C C +C + + + + W D Sbjct: 131 EKPYEVDMSHPFYRYDPSQCILCGRCVEACQNLQVSEVLSIDWDREIPRVIWDNDVPINE 190 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 191 S--------------SCVSCGHCVTVCP 204 >gi|242277665|ref|YP_002989794.1| reductase, iron-sulfur binding subunit [Desulfovibrio salexigens DSM 2638] gi|242120559|gb|ACS78255.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio salexigens DSM 2638] Length = 535 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + + D P + + R + G+ L L Sbjct: 84 RSLKVFMDICVRCGACADKCHFFIGSGDPKNMPVLRAELMRSIYRKDFTMAGKILSTLTG 143 Query: 221 PFR------------LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 Y+C C+ CP G++ A+ I + LL Sbjct: 144 SRVMTEDVLKEWFIYFYQCTECRRCSLFCPYGIDTAE-ITMMARELL 189 >gi|213026130|ref|ZP_03340577.1| succinate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 55 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%) Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIK 123 RSCREG+CGS G+N++G N LAC+ + I + PLP + VI+ Sbjct: 7 RSCREGVCGSDGLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIR 55 >gi|163745326|ref|ZP_02152686.1| D-lactate dehydrogenase (cytochrome) [Oceanibulbus indolifex HEL-45] gi|161382144|gb|EDQ06553.1| D-lactate dehydrogenase (cytochrome) [Oceanibulbus indolifex HEL-45] Length = 985 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 11/101 (10%) Query: 163 KIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + C C CPSY R I + D Sbjct: 568 FQGAIEMCNNNGACRKLKGGVMCPSYRVTRKEQDLTRGRANTLRLAITGQLGPDALTSDE 627 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + +L C + C + CP G++ +A++K+ ++ + Sbjct: 628 MAETMKL--CVSCKGCKRECPTGVD----MARMKIEVMSAR 662 >gi|330808657|ref|YP_004353119.1| cytochrome c oxidase accessory protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376765|gb|AEA68115.1| Putative cytochrome c oxidase accessory protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 470 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 5/73 (6%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMN 232 A C CP + S + + + +R E +G R L C Sbjct: 219 AVCMHMCPYARFQSVMFDKDTLTISYDA----ARGEIRGPRKREANPANIGLGDCIDCQM 274 Query: 233 CTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 275 CVQVCPTGIDIRD 287 >gi|312878988|ref|ZP_07738788.1| NAD-dependent formate dehydrogenase catalytic subunit [Aminomonas paucivorans DSM 12260] gi|310782279|gb|EFQ22677.1| NAD-dependent formate dehydrogenase catalytic subunit [Aminomonas paucivorans DSM 12260] Length = 902 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 22/106 (20%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+ + + + + +C++C C +C S Q Sbjct: 120 IQKSPFAEEGDTCTKYALEDANPFYVRDMNKCILCGRCIRACDSLA-------------Q 166 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLY----RCHTIMNCTQSCPKG 240 + +R ++ P + C C Q CP G Sbjct: 167 YHAIDFQNRGIKT-----MVQPPVGVDLEHSDCTFCGQCVQVCPVG 207 >gi|310829619|ref|YP_003961976.1| ethanolamine utilization Fe-S center protein eut [Eubacterium limosum KIST612] gi|308741353|gb|ADO39013.1| ethanolamine utilization Fe-S center protein eut [Eubacterium limosum KIST612] Length = 441 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 19/145 (13%) Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 P+ V D V ++ + ++ S P E C+ C+ Sbjct: 206 PMMGKIVDIDSYVT--------KTTKGFIVLPSDHPLIESKTRSIQDTIKLAGMACMQCS 257 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C+ CP + + + + AY D+ + L C C Sbjct: 258 LCTEVCPRHSLGHNLEPHKLMRIAAYGSTCDTTTQATNAFL-----------CCECGLCQ 306 Query: 235 QSCPKGLNPAKAIAKIKMMLLDRKI 259 +C L P K +K L + I Sbjct: 307 YACVMDLQPWKFNIALKRELGSKGI 331 >gi|229177118|ref|ZP_04304507.1| formate dehydrogenase [Bacillus cereus 172560W] gi|228606299|gb|EEK63731.1| formate dehydrogenase [Bacillus cereus 172560W] Length = 978 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|327480448|gb|AEA83758.1| ferredoxin [Pseudomonas stutzeri DSM 4166] Length = 470 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLY 225 + C CP + S + +++ D R E +G R + + L Sbjct: 213 AGYLREQVCIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEKRGPRKKDADYKAMGLG 267 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C Q CP G++ Sbjct: 268 DCIDCTMCVQVCPTGIDIRD 287 >gi|255525710|ref|ZP_05392642.1| molybdopterin oxidoreductase [Clostridium carboxidivorans P7] gi|296184814|ref|ZP_06853225.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium carboxidivorans P7] gi|255510612|gb|EET86920.1| molybdopterin oxidoreductase [Clostridium carboxidivorans P7] gi|296050596|gb|EFG90019.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium carboxidivorans P7] Length = 1197 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 40/137 (29%), Gaps = 24/137 (17%) Query: 126 VVDMSHF-YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPS 182 +F IE + ++ + E +C++C C +C Sbjct: 564 CGCHDYFECKLVNYIEDYNVDTKKISGEKHKRKEEQNHPFIERNPDKCILCGQCVRAC-- 621 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + ++G + R F + + P C + C CP G Sbjct: 622 -----EEFIGITAIGLEKR-------GFDSKVIPEFNLPLEESSCISCGQCVDVCPTG-- 667 Query: 243 PAKAIAKIKMMLLDRKI 259 A ++ + +++ Sbjct: 668 -----ACMEKQAVKKQV 679 >gi|162450390|ref|YP_001612757.1| putative oxidoreductase [Sorangium cellulosum 'So ce 56'] gi|161160972|emb|CAN92277.1| putative oxidoreductase [Sorangium cellulosum 'So ce 56'] Length = 1104 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 32/115 (27%), Gaps = 8/115 (6%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNS 187 Y ++ +D CV C T CPSY Sbjct: 565 YRVDENLRLGADFRPAAVETHFRFPDDDGDFTRATLRCVGVGKCRRHDGGTMCPSYMVTH 624 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + +++ E +G R D++ L C C CP ++ Sbjct: 625 EEEHATRGRARLLFEMLEG-GELRGFRDDSV--KESLDLCLACKGCKGECPVHVD 676 >gi|146282199|ref|YP_001172352.1| ferredoxin [Pseudomonas stutzeri A1501] gi|145570404|gb|ABP79510.1| probable ferredoxin [Pseudomonas stutzeri A1501] Length = 470 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLY 225 + C CP + S + +++ D R E +G R + + L Sbjct: 213 AGYLREQVCIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEKRGPRKKDADYKAMGLG 267 Query: 226 RCHTIMNCTQSCPKGLNPAK 245 C C Q CP G++ Sbjct: 268 DCIDCTMCVQVCPTGIDIRD 287 >gi|145588785|ref|YP_001155382.1| FAD linked oxidase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047191|gb|ABP33818.1| FAD linked oxidase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1025 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 15/99 (15%) Query: 168 YECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLI----DSRDEFQGERLDNL 218 C C CPSY D R + D +DE D + Sbjct: 589 EMCNNNGHCRKFDAEVMCPSYRVTRDEKHLTRGRANTIRLALSNQLDIQDESSPLGSDAI 648 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ L C + C + CP G++ +AK+K+ L Sbjct: 649 KEVMEL--CVSCKACRRECPTGVD----MAKMKIEFLSA 681 >gi|147677748|ref|YP_001211963.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] gi|146273845|dbj|BAF59594.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI] Length = 193 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 13/90 (14%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +++C C C+ CP + Q R + + L + Sbjct: 26 QPVHKCYQCGKCTAGCPVAFAMD------YPPNQVIRMVQLGL-------KEELLRCNSI 72 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + C T CT CP + A + +++M Sbjct: 73 WLCATCSTCTTRCPCNIEIAHVMEVLRVMA 102 >gi|94495959|ref|ZP_01302538.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] gi|94424651|gb|EAT09673.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] Length = 477 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 34/163 (20%), Gaps = 19/163 (11%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + + + A + K + + VI L FY Sbjct: 130 DRNAQIRLARAPWSAGKLARRLAKWGVWL-------VIAFLTGGAWIFYFADAPTLQRAF 182 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + L + C CP ++ L Sbjct: 183 WNGTAAPVAYATTAVLTATTFLLGGFLREQVCIYMCPWPRIQTAMLDEKSLVVTYKHW-- 240 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 R E +G P C C CP G++ Sbjct: 241 ------RGEKRGSLKKAAAHPQEFGDCIDCDQCVAVCPTGIDI 277 >gi|78185935|ref|YP_373978.1| DsrK protein [Chlorobium luteolum DSM 273] gi|78165837|gb|ABB22935.1| putative sulfite reductase-associated electron transfer protein DsrK [Chlorobium luteolum DSM 273] Length = 549 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 16/108 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLID------------S 206 R L CV C C+ C + D P I + R + D Sbjct: 92 RSLKLYLDACVRCGACADKCHFFLGTGDPKNMPVIRAELLRSVYRNDFPMVEKILKGFSG 151 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E + Y+C C+ CP G++ A+ + +L Sbjct: 152 SRKLTKEVIKEWH--MYFYQCTECRRCSVFCPLGIDTAEITMVARELL 197 >gi|78045161|ref|YP_359964.1| aldo/keto reductase family oxidoreductase [Carboxydothermus hydrogenoformans Z-2901] gi|77997276|gb|ABB16175.1| oxidoreductase, aldo/keto reductase family [Carboxydothermus hydrogenoformans Z-2901] Length = 341 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 12/152 (7%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + ++ +A+Y L + S + ++V M+ ++++ + V E L+ Sbjct: 199 ENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNSEVDLAAKMEALKEKASFA 258 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C C C CP ++ + + ER NL Sbjct: 259 AREF---CRRCGYCQP-CPVGIGIPTIFVLETYYDRY------GLPGWAKERYKNLTVK- 307 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP GL + + ++ L Sbjct: 308 -ADACQECGLCEARCPYGLPIRRKLKEVHRKL 338 >gi|330834752|ref|YP_004409480.1| formate dehydrogenase, alpha subunit [Metallosphaera cuprina Ar-4] gi|329566891|gb|AEB94996.1| formate dehydrogenase, alpha subunit [Metallosphaera cuprina Ar-4] Length = 964 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 27/171 (15%) Query: 83 GICGSCGMNIDGTNTLACVKDMKD-------------IKGAIAVYPLPHMSVIKDLVVDM 129 C +C ++ +G AC +++ + L + + + + Sbjct: 35 NSCDTCVVSANGRLVRACSTKVEEGMIITTDDQRAVEKRREALSRILRYHKLYCTVCENN 94 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 + H ++ K Q + +C++C C +C + N Sbjct: 95 NGDCDLHNAVVKERTFRQDYLNKPYSQDSSGPFYVYDPNQCILCGRCVEACQDFAVNEVI 154 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ W +D + N+ D C C CP Sbjct: 155 WIN---------WDLDPPRVVWDKG-SNIGDS----SCVNCGTCVTVCPVN 191 >gi|169599789|ref|XP_001793317.1| hypothetical protein SNOG_02720 [Phaeosphaeria nodorum SN15] gi|160705324|gb|EAT89451.2| hypothetical protein SNOG_02720 [Phaeosphaeria nodorum SN15] Length = 230 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + V M F+ + + H R+ G C+ C C Sbjct: 82 MEMFRGMYVSMEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEA 139 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID +C C +SCP Sbjct: 140 ICPAQAITIEAEERMDGSRRTTRYDIDMT------------------KCIYCGLCQESCP 181 Query: 239 KG 240 Sbjct: 182 VD 183 >gi|289549185|ref|YP_003474173.1| hypothetical protein Thal_1417 [Thermocrinis albus DSM 14484] gi|289182802|gb|ADC90046.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermocrinis albus DSM 14484] Length = 435 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 18/113 (15%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNS-----DRYLGPAILLQAYR------WLIDSRD 208 + + L CV C C+ +C Y + D L PA R + + R Sbjct: 27 NAEVAAYLESCVRCGLCAEACLFYMGENISGKIDPTLTPAYKADLLREIYKENFTLWGRI 86 Query: 209 EFQGERLDNLEDPF-------RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + +++ Y C CT+ CP G++ + + ++ L Sbjct: 87 KKTLGMGVKIDEKELKEQVKLAFYTCTMCDRCTKVCPMGIDTPRLVGIVRGAL 139 >gi|117926901|ref|YP_867518.1| NADH dehydrogenase subunit I [Magnetococcus sp. MC-1] gi|156633523|sp|A0LDR9|NUOI_MAGSM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|117610657|gb|ABK46112.1| NADH dehydrogenase subunit I [Magnetococcus sp. MC-1] Length = 164 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 19/118 (16%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + + V + + + + +I+ + H R+ G CV C C CP+ Sbjct: 19 QGMAVTLRYMFRPNITIQY--PEERTPYSPRFRGIHVLRRYEGGEERCVACKLCEAICPA 76 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 QA ID+ + +RL + D L++C C ++CP Sbjct: 77 ---------------QAIYIEIDT-ESRADKRLTKVYDID-LFKCIYCGLCEEACPVE 117 >gi|18977701|ref|NP_579058.1| H-II hydrogenase subunit beta [Pyrococcus furiosus DSM 3638] gi|7406954|gb|AAF61851.1|AF176650_1 sulfhydrogenase II subunit b [Pyrococcus furiosus DSM 3638] gi|18893435|gb|AAL81453.1| H-II hydrogenase subunit beta [Pyrococcus furiosus DSM 3638] Length = 334 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 20/113 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRW---------LIDSRDEFQ 211 +C+ C C+ CP+ D ++ L+ R+ L+ F+ Sbjct: 222 WKKYAEKCLGCGNCTIVCPTCRCYEVCDTWVRAYEALRMRRYDSCFMPTHGLVAGGHNFR 281 Query: 212 GERLD---------NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 RLD N DP + C C + CP + K + +++ L+ Sbjct: 282 PTRLDRFRHRYYCKNYFDPEAGFNCVGCGRCDEFCPARIEHVKVLDEVREGLI 334 >gi|238787192|ref|ZP_04630992.1| Pyruvate-flavodoxin oxidoreductase [Yersinia frederiksenii ATCC 33641] gi|238724980|gb|EEQ16620.1| Pyruvate-flavodoxin oxidoreductase [Yersinia frederiksenii ATCC 33641] Length = 1177 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 9/94 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + PA + A DS Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACP-HSAIRAKVVPPAAMAGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG 240 + D + L C C + CP Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAK 758 >gi|289423109|ref|ZP_06424924.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Peptostreptococcus anaerobius 653-L] gi|289156440|gb|EFD05090.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Peptostreptococcus anaerobius 653-L] Length = 1177 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP +L + +++ + G+ L+NL+ Sbjct: 683 PEWQIDNCIQCNQCSLVCP--HAAIRPFLLTEEEAKNAPENFNTK-KAMGKGLENLQYRI 739 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++ C NC CP Sbjct: 740 QVSAMDCTGCGNCADVCPAK 759 >gi|285013341|gb|ADC32658.1| PduS [Klebsiella pneumoniae] Length = 450 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + E C C C+ CP + + L P +L++A + Sbjct: 240 GNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 293 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 R L + C C CP G++P + +K L + + Sbjct: 294 RQAATPSLLLSALT------CSECNVCESVACPVGISPMRIDRLLKRELRAKNL 341 >gi|228919447|ref|ZP_04082811.1| formate dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840090|gb|EEM85367.1| formate dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 978 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|77458755|ref|YP_348261.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens Pf0-1] gi|77382758|gb|ABA74271.1| putative ferredoxin [Pseudomonas fluorescens Pf0-1] Length = 484 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 A C CP + S + + + ++R + E L C C Sbjct: 233 AVCMHMCPYARFQSVMFDKDTLAISYDVARGENRGPRKREVKPA---EAGLGDCIDCQLC 289 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 290 VQVCPTGIDIRD 301 >gi|73748099|ref|YP_307338.1| putative [Fe] hydrogenase, large subunit HymC [Dehalococcoides sp. CBDB1] gi|73659815|emb|CAI82422.1| putative [Fe] hydrogenase, large subunit HymC [Dehalococcoides sp. CBDB1] Length = 573 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 43/217 (19%), Gaps = 35/217 (16%) Query: 45 MDTYYVD----LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 M T +D G +L I C C + I+G LA Sbjct: 1 MVTLNIDNKQVTVPEGATILQAAKEANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT 60 Query: 101 VKDMK--------------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 K + L + + R Sbjct: 61 SCSRKVAEGMKVNTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E D + + C+ C C C + A ++ Sbjct: 121 LRFEESEKRVLPIDNTSPSIIRDPNKCIACGRCVRVCHDIQT-----------VNAIGFI 169 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D +D C C CP G Sbjct: 170 NKGPDTMVATSMDR---GMGNVACANCGQCILVCPVG 203 >gi|308062550|gb|ADO04438.1| NADH dehydrogenase subunit G [Helicobacter pylori Cuz20] Length = 844 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKDR---MSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|307718965|ref|YP_003874497.1| transporter [Spirochaeta thermophila DSM 6192] gi|306532690|gb|ADN02224.1| transporter [Spirochaeta thermophila DSM 6192] Length = 444 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 20/97 (20%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + C+ CA C +CP + YL R R E R Sbjct: 363 PRSVEPCIRCAKCVQACP---MGLEPYL-------LERLSARERWEEAEAR--------G 404 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKM--MLLDRK 258 + C +C CP I K M+L +K Sbjct: 405 IVDCVECGSCAYICPASRPLLDYIRYGKTTVMMLRKK 441 >gi|283785824|ref|YP_003365689.1| propanediol utilization: polyhedral bodies [Citrobacter rodentium ICC168] gi|282949278|emb|CBG88888.1| propanediol utilization: polyhedral bodies [Citrobacter rodentium ICC168] Length = 451 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + Sbjct: 243 HPLIKRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNF----HQ 296 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 + L + C C CP G++P + +K L Sbjct: 297 AATPQLLLSALT------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|256419730|ref|YP_003120383.1| cytochrome C oxidase accessory protein CcoG [Chitinophaga pinensis DSM 2588] gi|256034638|gb|ACU58182.1| cytochrome c oxidase accessory protein CcoG [Chitinophaga pinensis DSM 2588] Length = 460 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 ++ C+ CP Y L ++ AY + +R E +G N ++ Sbjct: 200 AGVFYSVFAFFREQVCTIVCP-YGRLQGVLLDRDSVVVAYDY---TRGEPRGHFKKNADN 255 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 256 --NLGDCIDCNQCVKVCPTGIDI 276 >gi|126727165|ref|ZP_01743002.1| NADH dehydrogenase subunit I [Rhodobacterales bacterium HTCC2150] gi|126703593|gb|EBA02689.1| NADH dehydrogenase subunit I [Rhodobacterales bacterium HTCC2150] Length = 163 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 24/124 (19%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M +IK + M +F+ ++ + H R+ +G C+ C C Sbjct: 15 MDIIKGFGLGMKYFFRPKATLNY--PHEKGPLSPRFRGEHALRRYANGEERCIACKLCEA 72 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQS 236 CP+ QA + RD+ R D C C ++ Sbjct: 73 ICPA---------------QAITIDAEPRDDGSRRTTRYDIDMTK-----CIYCGFCQEA 112 Query: 237 CPKG 240 CP Sbjct: 113 CPVD 116 >gi|52548671|gb|AAU82520.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos18B6] Length = 801 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 19/116 (16%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + K + L D + + +C++C C+ +CP+ + + Sbjct: 375 DQVGEVAVRTALQMDKKRRSLKFILSDDEFKYYVNDCILCGSCTLACPNGLYIGEANKSA 434 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + L D F + C C Q C K + + K Sbjct: 435 AAGN-----------------IKPLADLFDI--CVGCGRCEQVCKKHIPIVDVMTK 471 >gi|89896277|ref|YP_519764.1| hypothetical protein DSY3531 [Desulfitobacterium hafniense Y51] gi|89335725|dbj|BAE85320.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 424 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 29/119 (24%), Gaps = 21/119 (17%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +P + + + + C C C C + + Sbjct: 35 QPGFRLRKEEERIMNHAEETLAACQEIIDNCTDCGLCRAECQLLERIDESLV-------- 86 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 S Q + Y C C CP GL+P A ++ + + Sbjct: 87 ------SLATRQPTVSEA-------YNCSLCGLCESVCPAGLSPKYMFAALREQSVAKG 132 >gi|83944109|ref|ZP_00956565.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Sulfitobacter sp. EE-36] gi|83844976|gb|EAP82857.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Sulfitobacter sp. EE-36] Length = 535 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 21/106 (19%), Gaps = 27/106 (25%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP + + +W + R + +R Sbjct: 201 FIFGGFMREQICIYMCPWPRIQGAMMDPGTLTVGYRKWRGEPRGKGGVKRQQAAAAAIGS 260 Query: 224 --------------------------LYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 261 GDAVARYGAALDINSAGDRQSRSGDVLGDCIDCNACVAVCPMGIDI 306 >gi|83955192|ref|ZP_00963848.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Sulfitobacter sp. NAS-14.1] gi|83840521|gb|EAP79694.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family protein [Sulfitobacter sp. NAS-14.1] Length = 535 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 21/106 (19%), Gaps = 27/106 (25%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR- 223 + C CP + + +W + R + +R Sbjct: 201 FIFGGFMREQICIYMCPWPRIQGAMMDPGTLTVGYRKWRGEPRGKGGVKRQQAAAAAIGK 260 Query: 224 --------------------------LYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 261 GDAVARYGAALDINSAGDRQSRSGDVLGDCIDCNACVAVCPMGIDI 306 >gi|291530144|emb|CBK95729.1| electron transport complex, RnfABCDGE type, C subunit [Eubacterium siraeum 70/3] Length = 432 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 18/81 (22%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C+ C C +C L P L A+ D RD Q E+L + Sbjct: 352 YEPSDCIRCGKCVKACSMN-------LLPTELEHAF----DMRDARQLEKLK-------V 393 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C+ CP N A+ Sbjct: 394 NLCVNCGACSFVCPAKRNLAE 414 >gi|295689285|ref|YP_003592978.1| cytochrome c oxidase accessory protein CcoG [Caulobacter segnis ATCC 21756] gi|295431188|gb|ADG10360.1| cytochrome c oxidase accessory protein CcoG [Caulobacter segnis ATCC 21756] Length = 497 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 20/84 (23%), Gaps = 5/84 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ CP ++ + + + R + + Sbjct: 224 CTTYIFAGWMREQVCTYMCPWPRIQGAMLDHHSLQVTYLGYRGEPRGPHKKG-----QSW 278 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 279 EGRGDCVDCRQCVVVCPMGIDIRD 302 >gi|258511892|ref|YP_003185326.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478618|gb|ACV58937.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 986 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 49/208 (23%), Gaps = 35/208 (16%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLACVKDM- 104 LD +G ++ + L C C +C + ++G AC + Sbjct: 11 LDGSPLTATEGETILQAMLAAGLDFPHICYHPALGPIETCDTCMVEVNGDLVRACATPVV 70 Query: 105 ------------KDIKGAIAVYPLPHMSVIKDLVVDMSHFY--SQHRSIEPWLKTVSPKP 150 + + L + + + + + P Sbjct: 71 EGMSVRTKSVAARYARKEAMDRILKNHDLYCTVCDNNNGNCVVHNTTMAMDIDHQSYPFR 130 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 K +C++C C +C + + + + W D Sbjct: 131 EKPYEVDMSHPFYRYDPSQCILCGRCVEACQNLQVSEVLSIDWDREIPRVIWDNDVPINE 190 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 191 S--------------SCVSCGHCVTVCP 204 >gi|39995199|ref|NP_951150.1| heterodisulfide reductase subunit [Geobacter sulfurreducens PCA] gi|39981961|gb|AAR33423.1| heterodisulfide reductase subunit [Geobacter sulfurreducens PCA] gi|298504203|gb|ADI82926.1| heterodisulfide reductase, iron-sulfur cluster-binding subunit, putative [Geobacter sulfurreducens KN400] Length = 309 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 22/97 (22%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C C CP + L QA + Sbjct: 190 AFWKEHFSRCIRCYACRQVCPFCYCEQC--LCDRNRPQAVETTPRP---AGNMAWHMVRA 244 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + + + Sbjct: 245 MHLAGRCAGCAECERACPMDIPL----NLLNRKMAKE 277 >gi|312882733|ref|ZP_07742468.1| FixG-related protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369591|gb|EFP97108.1| FixG-related protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 481 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 + C CP Y + Y D+ R E +G R ++ Sbjct: 211 AGCTYANAGWMRSIMCVHICP-YARFQSAMFDKDTFIVGY----DTKRGEQRGGRSKKVD 265 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 HKSLGLGDCVDCNLCVQVCPTGIDIRDGLQY 296 >gi|229188797|ref|ZP_04315832.1| formate dehydrogenase [Bacillus cereus ATCC 10876] gi|228594698|gb|EEK52482.1| formate dehydrogenase [Bacillus cereus ATCC 10876] Length = 978 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFFASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|157145052|ref|YP_001452371.1| hypothetical protein CKO_00783 [Citrobacter koseri ATCC BAA-895] gi|157082257|gb|ABV11935.1| hypothetical protein CKO_00783 [Citrobacter koseri ATCC BAA-895] Length = 451 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + E C C C+ CP + + L P +L++A + Sbjct: 241 KNHPLIQRRMQDERTVLSVAKTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY---- 294 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 + + L + C C CP G++P + +K L + + Sbjct: 295 QQAATPQLLLSALT------CSECNVCESVACPVGISPMRINRMLKRELRAQNL 342 >gi|145218869|ref|YP_001129578.1| DsrK protein [Prosthecochloris vibrioformis DSM 265] gi|145205033|gb|ABP36076.1| putative sulfite reductase-associated electron transfer protein DsrK [Chlorobium phaeovibrioides DSM 265] Length = 549 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 16/108 (14%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--WLID------------S 206 R L CV C C+ C + D P I + R + D Sbjct: 92 RSLKLYLDACVRCGACADKCHFFLGTGDPKNMPVIRAELLRSVYRNDFPMVEKILKGFSG 151 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E + Y+C C+ CP G++ A+ + +L Sbjct: 152 SRKLTAEVIKEWHSY--FYQCTECRRCSVFCPLGIDTAEITMVARELL 197 >gi|157165162|ref|YP_001466207.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter concisus 13826] gi|112801482|gb|EAT98826.1| iron-sulfur cluster-binding domain protein [Campylobacter concisus 13826] Length = 557 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 26/106 (24%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + + L SPK + ++ +C C+ CP+ + Sbjct: 171 KDEKVLEILNAKSPKFRYKSFTQYDSSICQYHERRSEICGRCAEVCPTVAILKE------ 224 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 DE + ++ C NC CP G Sbjct: 225 -------------DETKHLVFSAID-------CTNCGNCISVCPSG 250 >gi|70730236|ref|YP_259975.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] gi|68344535|gb|AAY92141.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] Length = 471 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 A C CP + S + + + +SR + + L C C Sbjct: 220 AVCMHMCPYARFQSVMFDKDTLTISYNPVRGESRGPRKRDVKPA---DVGLGDCIDCQLC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|317011421|gb|ADU85168.1| D-lactate dehydrogenase [Helicobacter pylori SouthAfrica7] Length = 946 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ ++ + L C+ C C C Sbjct: 497 EKAYQIHKQIKALFDPNGLLNPDVIITDDKEIHTKNLKSIYPIEEYLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWL-------IDSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + +E + + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVNQGYNEDKALLDELLKESEYLAHKTCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSTLCPLGIDTGKI 627 >gi|303245643|ref|ZP_07331926.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ] gi|302492906|gb|EFL52771.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ] Length = 585 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 48/178 (26%), Gaps = 34/178 (19%) Query: 81 REGICGSCGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVI---------KDLVV 127 + C C + ++G LA + + L + KD +V Sbjct: 48 KAASCRVCVVEVEGRRNLAPSCATPVTDNMVVKTNTLRVLNARRTVLELLLSDHPKDCLV 107 Query: 128 D-MSHFYSQHRSIEPWLKTVSPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYW 184 S E + SP E+ +D I + +C+MC C T C + Sbjct: 108 CAKSGECELQTLAERFGIRESPYDGGEMSHYRKDISASIIRDMDKCIMCRRCETMCNTVQ 167 Query: 185 WNS--DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A + ++ D C C CP G Sbjct: 168 TCGVLSGVNRGFTAVVAPAFEMNLADTV----------------CTNCGQCVAVCPTG 209 >gi|239992865|ref|ZP_04713389.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Alteromonas macleodii ATCC 27126] Length = 467 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C+ CP + S + + + R + Sbjct: 201 AVCTYGNAGYMREIMCTHICPYARFQSAMFDKDTFTVSYDAKRGEQRGPRPRKLSHEQVK 260 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 261 EKGLGDCIDCNLCVQVCPTGIDI 283 >gi|187934157|ref|YP_001886542.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum B str. Eklund 17B] gi|187722310|gb|ACD23531.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum B str. Eklund 17B] Length = 1171 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 13/91 (14%) Query: 163 KIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 +C+ C CS CP + N + L ++ LI+ + E+L Sbjct: 684 PEWLQDKCIQCNQCSYVCPHATIRPFLLNEEEKLKAPSSIK----LIEPKALKSDEKLYY 739 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C NC + CP P KA+ Sbjct: 740 SIGVTPL-DCTGCGNCVEVCPA---PGKALI 766 >gi|145598115|ref|YP_001162191.1| pyruvate-flavodoxin oxidoreductase [Yersinia pestis Pestoides F] gi|145209811|gb|ABP39218.1| pyruvate-flavodoxin oxidoreductase [Yersinia pestis Pestoides F] Length = 1177 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 13/116 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMAGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDRKI 259 + D + L C C + CP KAI ++ L R + Sbjct: 725 DVKARDMRGQKYILQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MRPRLEHRAV 779 >gi|114561972|ref|YP_749485.1| formate dehydrogenase, alpha subunit [Shewanella frigidimarina NCIMB 400] gi|114333265|gb|ABI70647.1| formate dehydrogenase, alpha subunit [Shewanella frigidimarina NCIMB 400] Length = 1406 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 14/100 (14%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID- 205 A++ + C+ CA C +C ++ + +Y+ L D Sbjct: 607 DQTQARKFKVDNSAPFITFDANRCISCAACIDACHQQSGHN----VISFEANSYQALPDA 662 Query: 206 -----SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 SR+ + ++ D C NC Q CP G Sbjct: 663 ATTGISRNAPRVGFTASMNDSD----CVQCGNCVQVCPTG 698 >gi|22125891|ref|NP_669314.1| oxidoreductase, Fe-S subunit [Yersinia pestis KIM 10] gi|45441913|ref|NP_993452.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Microtus str. 91001] gi|108807678|ref|YP_651594.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Antiqua] gi|108811955|ref|YP_647722.1| pyruvate-flavodoxin oxidoreductase [Yersinia pestis Nepal516] gi|149365754|ref|ZP_01887789.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis CA88-4125] gi|165926479|ref|ZP_02222311.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. F1991016] gi|165938637|ref|ZP_02227193.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. IP275] gi|166010705|ref|ZP_02231603.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210534|ref|ZP_02236569.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400853|ref|ZP_02306359.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422057|ref|ZP_02313810.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424879|ref|ZP_02316632.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467095|ref|ZP_02331799.1| pyruvate-flavodoxin oxidoreductase [Yersinia pestis FV-1] gi|218929426|ref|YP_002347301.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis CO92] gi|229837855|ref|ZP_04458014.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895013|ref|ZP_04510191.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Pestoides A] gi|229898416|ref|ZP_04513563.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Orientalis str. India 195] gi|229902263|ref|ZP_04517383.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Nepal516] gi|270490554|ref|ZP_06207628.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis KIM D27] gi|294503653|ref|YP_003567715.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Z176003] gi|21958826|gb|AAM85565.1|AE013802_10 putative oxidoreductase, Fe-S subunit [Yersinia pestis KIM 10] gi|45436776|gb|AAS62329.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Microtus str. 91001] gi|108775603|gb|ABG18122.1| pyruvate-flavodoxin oxidoreductase [Yersinia pestis Nepal516] gi|108779591|gb|ABG13649.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Antiqua] gi|115348037|emb|CAL20962.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis CO92] gi|149292167|gb|EDM42241.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis CA88-4125] gi|165913511|gb|EDR32132.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. IP275] gi|165921700|gb|EDR38897.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990407|gb|EDR42708.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207714|gb|EDR52194.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. B42003004] gi|166958869|gb|EDR55890.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049706|gb|EDR61114.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056066|gb|EDR65844.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680598|gb|EEO76694.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Nepal516] gi|229688706|gb|EEO80775.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Orientalis str. India 195] gi|229694221|gb|EEO84268.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702108|gb|EEO90129.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Pestoides A] gi|262362229|gb|ACY58950.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis D106004] gi|262365562|gb|ACY62119.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis D182038] gi|270339058|gb|EFA49835.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Yersinia pestis KIM D27] gi|294354112|gb|ADE64453.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis Z176003] gi|320014991|gb|ADV98562.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 1177 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 13/116 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMAGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDRKI 259 + D + L C C + CP KAI ++ L R + Sbjct: 725 DVKARDMRGQKYILQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MRPRLEHRAV 779 >gi|331269260|ref|YP_004395752.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Clostridium botulinum BKT015925] gi|329125810|gb|AEB75755.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium botulinum BKT015925] Length = 1168 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 4/85 (4%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP + + +GE+L + Sbjct: 681 PEWSMENCIQCNQCSYVCPHAVIRPTLLTEEEYNNKPEGFKAVEAKGLKGEKLYYSMNVS 740 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC + CP P KA+ Sbjct: 741 AL-DCTGCGNCAEVCPA---PTKAL 761 >gi|327401111|ref|YP_004341950.1| D-lactate dehydrogenase (cytochrome)., CoB--CoM heterodisulfide reductase [Archaeoglobus veneficus SNP6] gi|327316619|gb|AEA47235.1| D-lactate dehydrogenase (cytochrome)., CoB--CoM heterodisulfide reductase [Archaeoglobus veneficus SNP6] Length = 1031 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 42/166 (25%), Gaps = 11/166 (6%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 L + K + P + K + + + ++ ++ Sbjct: 434 LGKERFEKLKSFKDKIDPEKIFNPGKVVDPSFAASLIKIAENFAFIDKMAKPVEYGERIG 493 Query: 158 HEDR-----QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + Y C C C C Y P + + E Sbjct: 494 EKSSGKLPEFVEWYAYACAQCGYCVDDCTEYDAKKWESTSPRGKYYFLKLYAEGEVELNQ 553 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + +D + C T C +C + + ++ L+ +K Sbjct: 554 QMVD------KFLLCTTCEKCNVNCQLDMPVLETWEYMRDFLIGKK 593 >gi|325958998|ref|YP_004290464.1| Heterodisulfide reductase subunit C, HdrC2 [Methanobacterium sp. AL-21] gi|325330430|gb|ADZ09492.1| Heterodisulfide reductase subunit C, HdrC2 [Methanobacterium sp. AL-21] Length = 195 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 20/102 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 G+++CV C CS+ CP+ A R D + E G L + E Sbjct: 22 KASPELGIFKCVQCGMCSSVCPA----------------AKRTDYDPK-EMLGRVLQDDE 64 Query: 220 DPFR---LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 ++ C + C CP G N + ++ M +D+ Sbjct: 65 TVVDDDTIWYCFSCYTCNSVCPSGNNACEVNQILRQMAIDKG 106 >gi|317014608|gb|ADU82044.1| D-lactate dehydrogenase [Helicobacter pylori Gambia94/24] Length = 946 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 23/137 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGLLNPDVIITNDKEIHTKNLKSIYPIEEHLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + DE Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSHGHDEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKAIA 248 C+ CP ++ +IA Sbjct: 613 MCSTLCPLEID-TGSIA 628 Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERICPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|313905838|ref|ZP_07839196.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Eubacterium cellulosolvens 6] gi|313469352|gb|EFR64696.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Eubacterium cellulosolvens 6] Length = 1181 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 25/95 (26%), Gaps = 11/95 (11%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C CS CP + + A S D L Sbjct: 689 WNSDNCIQCNRCSYVCP--HAVIRPFALTPAEVDAAPEGFKSMDMTGMPEYKFSMQISTL 746 Query: 225 YRCHTIMNCTQSCP--KG------LNPAKAIAKIK 251 C +C CP KG + A+ + K Sbjct: 747 -DCTGCGSCANVCPGKKGEKALTMVPLGDALDQQK 780 >gi|254491908|ref|ZP_05105087.1| NADH-quinone oxidoreductase, chain I subfamily [Methylophaga thiooxidans DMS010] gi|224463386|gb|EEF79656.1| NADH-quinone oxidoreductase, chain I subfamily [Methylophaga thiooxydans DMS010] Length = 162 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 23/108 (21%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D Sbjct: 37 PEEKTPQSPRFRGLHALRRYPNGEERCIGCKLCEAVCPALAITIDT-------------- 82 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + RD+ D L++C C +SCP +I + + Sbjct: 83 -EPRDDGTRRTTRYDID---LFKCIYCGFCEESCPV-----DSIVETR 121 >gi|222625883|gb|EEE60015.1| hypothetical protein OsJ_12764 [Oryza sativa Japonica Group] Length = 815 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 29/132 (21%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L++ + +F+ ++ +I + + H R+ G C+ C C Sbjct: 668 EMVRGLMLTLKYFFEKNVTINYPFEKG--PLSPRFRGEHALRRYPTGEERCIACKLCEAI 725 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 726 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 765 Query: 238 PKGLNPAKAIAK 249 P AI + Sbjct: 766 PV-----DAIVE 772 >gi|20092656|ref|NP_618731.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina acetivorans C2A] gi|38503085|sp|Q8TJC6|ACDA2_METAC RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 2; Short=ACDS complex subunit alpha 2; AltName: Full=ACDS complex carbon monoxide dehydrogenase 2; Short=ACDS CODH 2 gi|19917939|gb|AAM07211.1| carbon-monoxide dehydrogenase, subunit alpha [Methanosarcina acetivorans C2A] Length = 805 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 19/90 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + +CV C C +CP + P L A + E L+ L Sbjct: 406 DEEFKVYIDKCVKCGECMLACP------EELDIPEALEYAAK--------GSYEYLEALH 451 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D C C Q C K + + K Sbjct: 452 DV-----CIGCRRCEQVCKKEIPILNVLEK 476 >gi|296446382|ref|ZP_06888327.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylosinus trichosporium OB3b] gi|296256155|gb|EFH03237.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylosinus trichosporium OB3b] Length = 377 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 25/119 (21%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWL----ID--- 205 ++ E + + C+ C C+ CP+ L A ++ RW +D Sbjct: 251 RNLEHERWDEAASRCLSCTNCTMVCPTCFCTSVEDASDLFGAESSRSRRWDSCFTMDFSY 310 Query: 206 ----SRDEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK---AIAK 249 S R L D F C C CP G++ + AIA+ Sbjct: 311 IHGGSVRSSGKSRYRQWMTHKLSTWHDQFGTTGCVGCGRCIVWCPVGIDITEEARAIAE 369 >gi|168818260|ref|ZP_02830260.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345117|gb|EDZ31881.1| polyhedral body protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086486|emb|CBY96257.1| Electron transport complex protein rnfC [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 451 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 13/107 (12%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNFH---QA 297 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 L L C C CP G++P + +K L Sbjct: 298 ATPPLLLSALT-------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|24212861|ref|NP_710342.1| NADH dehydrogenase (ubiquinone) chain I [Leptospira interrogans serovar Lai str. 56601] gi|45656052|ref|YP_000138.1| NADH dehydrogenase II subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81472291|sp|Q8F9N0|NUOI_LEPIN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81699547|sp|Q72VZ9|NUOI_LEPIC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|24193522|gb|AAN47360.1| NADH dehydrogenase (ubiquinone) chain I [Leptospira interrogans serovar Lai str. 56601] gi|45599285|gb|AAS68775.1| NADH dehydrogenase I I subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 175 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 14/126 (11%) Query: 118 HMSVIKDLVVDMSHFYSQ---HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 S+ K L + + HF +++ K + H ++ G C C Sbjct: 23 FYSIGKGLWITLKHFIKAAILRKAVTIEFPEKKRKYSTRFRGMHTMKRDEQGRERCTSCF 82 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CC CP+ + A + + D++ + L RC C Sbjct: 83 CCMWICPADAIYIE-----AAEVTPEIQHLHPEDKYAKKF------EIDLLRCIFCGMCE 131 Query: 235 QSCPKG 240 ++CPKG Sbjct: 132 EACPKG 137 >gi|126463501|ref|YP_001044615.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides ATCC 17029] gi|126105165|gb|ABN77843.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides ATCC 17029] Length = 960 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 13/106 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + +++ + +C++C+ C +C + Sbjct: 144 YEAVENHFTPRNAGGDLNPQWMVKDESNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIE 203 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR D F C + C Q+CP Sbjct: 204 GRGF--------DSRVSA-----GMASDSFLTSDCVSCGACVQACP 236 >gi|145219794|ref|YP_001130503.1| FAD linked oxidase domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205958|gb|ABP37001.1| FAD linked oxidase domain protein [Chlorobium phaeovibrioides DSM 265] Length = 1217 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 5/84 (5%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQA-----YRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C Y+ + P A L D++ E + Sbjct: 776 DYCIRCGKCKIDCCVYYPARGMFYHPRNKNLAIGSLIEALLFDAQRERSTDFALLRWLEE 835 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKA 246 C C + CP ++ + Sbjct: 836 VADHCTICHKCLKPCPVDIDTGEV 859 >gi|332559555|ref|ZP_08413877.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides WS8N] gi|332277267|gb|EGJ22582.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides WS8N] Length = 960 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 28/106 (26%), Gaps = 13/106 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + + + +C++C+ C +C + Sbjct: 144 YEAVENHFTPRNAGGDLNPQWMAKDESNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIE 203 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR D F C + C Q+CP Sbjct: 204 GRGF--------DSRVSA-----GMASDSFLTSDCVSCGACVQACP 236 >gi|298504207|gb|ADI82930.1| heterodisulfide reductase, subunit C [Geobacter sulfurreducens KN400] Length = 194 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 13/114 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 ++ +S + + + C C CS CP + + Sbjct: 1 MKHSKMRLSTETMNLGFVRKVEALSGSSVRRCFQCGKCSAGCPMRSFME------HPPNR 54 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 R+L + + + ++ C + CT CP ++ A + ++ Sbjct: 55 IVRFLQLGQ-------YERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRK 101 >gi|319955923|ref|YP_004167186.1| NADH dehydrogenase subunit g [Nitratifractor salsuginis DSM 16511] gi|319418327|gb|ADV45437.1| NADH dehydrogenase subunit G [Nitratifractor salsuginis DSM 16511] Length = 821 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 51/225 (22%), Gaps = 46/225 (20%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKDI 107 V+ + P + R S C C + DG AC K+ Sbjct: 13 VECRTTEGEYVLNAARANGIFIPAICYLTRCSPTLA-CRLCLVEADGKRVYACNAKAKEG 71 Query: 108 KGAIAV---------YPLPHMSVIKDLVVDM-----SHFYSQHRSIEPWLKTVSPKPAKE 153 + + V L + + + Sbjct: 72 MEVVTTTEEILEERRAIMEVYDVNHPLQCGVCDQHGECELQNYTLEMGVDSQHYAIADTK 131 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + C++C C T C +S GP D+ E Sbjct: 132 REVKNWSTVLHYDAALCIVCERCVTVCKDMIGDSALKTGPRGG-----------DKVDKE 180 Query: 214 RLDNL-EDPFRLYR-----------------CHTIMNCTQSCPKG 240 + + +D + ++ C CT CP G Sbjct: 181 YKEMMPKDAYAMWNKLQKSIIVPSNGTEHTNCSDCGECTAVCPVG 225 >gi|315446712|ref|YP_004079591.1| FAD/FMN-dependent dehydrogenase [Mycobacterium sp. Spyr1] gi|315265015|gb|ADU01757.1| FAD/FMN-dependent dehydrogenase [Mycobacterium sp. Spyr1] Length = 950 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 10/89 (11%) Query: 162 QKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ C C CPSY + + + +I+ D G Sbjct: 542 DFTQAVHRCTGVGKCRADNTDTGGVMCPSYLATREEKDSTRGRARVLQEMINGADVRGGW 601 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R + L C + C CP G++ Sbjct: 602 RSPEVH--EALDLCLSCKGCASDCPTGVD 628 >gi|145221551|ref|YP_001132229.1| FAD linked oxidase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214037|gb|ABP43441.1| FAD linked oxidase domain protein [Mycobacterium gilvum PYR-GCK] Length = 950 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 10/89 (11%) Query: 162 QKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ C C CPSY + + + +I+ D G Sbjct: 542 DFTQAVHRCTGVGKCRADNTDTGGVMCPSYLATREEKDSTRGRARVLQEMINGADVRGGW 601 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R + L C + C CP G++ Sbjct: 602 RSPEVH--EALDLCLSCKGCASDCPTGVD 628 >gi|146278885|ref|YP_001169044.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides ATCC 17025] gi|145557126|gb|ABP71739.1| formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides ATCC 17025] Length = 960 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 28/106 (26%), Gaps = 13/106 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + + + +C++C+ C +C + Sbjct: 144 YEAVENHFTPRNAGGDLNPQWMAKDESNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIE 203 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR D F C + C Q+CP Sbjct: 204 GRGF--------DSRVSA-----GMASDSFLTSDCVSCGACVQACP 236 >gi|323699241|ref|ZP_08111153.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio sp. ND132] gi|323459173|gb|EGB15038.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio desulfuricans ND132] Length = 556 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 15/155 (9%) Query: 115 PLPHMSVIKDLVVDMSHFYSQH---RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECV 171 P + K+L + + + R + CV Sbjct: 41 PEKIAYMDKELPGLWGEPRQWLPSDADWKLPPNWKETVVNGFRERLKKFRTLQLFMDICV 100 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN-----LEDPFRL-- 224 C C+ C + + D P + + R + G+ + + + L Sbjct: 101 RCGACADKCHYFIGSGDPKNMPVLRAELMRSVYRGEFTLAGKIMSKFTGSRVMEEHVLKE 160 Query: 225 -----YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C C+ CP G++ A+ + ++ Sbjct: 161 WFIYFYQCTQCRRCSLFCPYGIDTAEMTMMARELM 195 >gi|262396694|ref|YP_003288547.1| formate dehydrogenase-O major subunit [Vibrio sp. Ex25] gi|262340288|gb|ACY54082.1| formate dehydrogenase-O major subunit [Vibrio sp. Ex25] Length = 1387 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 6/105 (5%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQ 198 + WL + + C+ C C +C + ++ Sbjct: 575 QDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLSFVSDKNGRP 634 Query: 199 AYRWLIDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKG 240 A R D R F+ + C C Q+CP G Sbjct: 635 ALR--PDDRPRFRSDEKGASCSGLTLMGNSNCVQCGACVQACPTG 677 >gi|253698687|ref|YP_003019876.1| heterodisulfide reductase subunit [Geobacter sp. M21] gi|251773537|gb|ACT16118.1| heterodisulfide reductase subunit [Geobacter sp. M21] Length = 194 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 ++ L +S + + + C C CS CP + + Sbjct: 1 MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFME------HPPNR 54 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L + + + ++ C + CT CP ++ A + ++ + Sbjct: 55 IVRLLQLGQGQR-------VLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKL 102 >gi|163735778|ref|ZP_02143207.1| dihydropyrimidine dehydrogenase [Roseobacter litoralis Och 149] gi|161390864|gb|EDQ15204.1| dihydropyrimidine dehydrogenase [Roseobacter litoralis Och 149] Length = 434 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 31/190 (16%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAV 113 CGP V L + ++I R GI G +++ A+ Sbjct: 232 YCGPAVKPIALSMVSEIARDAETRGMPISGIGGVTTWRDAAEYITMGCGNVQVCTAAMTY 291 Query: 114 YPLPHMSVIKDLVVDMSHFYSQ--HRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYEC 170 V+++++ +S + + H I ++ P + L + + +C Sbjct: 292 ----GFKVVQEMISGLSQWMDEKGHTDIRDFMGAAIPNTTDWQYLNLNYIAKAQINQADC 347 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 + C C +C QA +R+ ++ D C Sbjct: 348 ISCGRCYAACED------------TSHQAIAM--------SEDRVFSVIDEE----CVAC 383 Query: 231 MNCTQSCPKG 240 C + CP Sbjct: 384 NLCVEVCPVE 393 >gi|83590446|ref|YP_430455.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573360|gb|ABC19912.1| putative sulfite reductase-associated electron transfer protein DsrK [Moorella thermoacetica ATCC 39073] Length = 541 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 15/108 (13%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE----RLD 216 R + CV C C+ C + D P + + R + RD RL Sbjct: 83 RSLQVFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYR-RDFTTAGKLLGRLV 141 Query: 217 NLEDP---------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 D + ++C C+ CP G++ A+ I I LL Sbjct: 142 GARDLTVDVLKEWFYYFFQCTECRRCSLFCPYGIDTAE-ITMIGRELL 188 >gi|85707196|ref|ZP_01038282.1| NAD-dependent formate dehydrogenase, alpha subunit [Roseovarius sp. 217] gi|85668250|gb|EAQ23125.1| NAD-dependent formate dehydrogenase, alpha subunit [Roseovarius sp. 217] Length = 964 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 13/96 (13%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 T + L + + +C++C C +C + G L R Sbjct: 158 RNTSGETNPEWLPKDDSNPYFSYDPSKCIVCNRCVRAC-------EEVQGTFALTIQGR- 209 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR N D F C + C Q+CP Sbjct: 210 GFDSRVSA-----GNAGDDFLASDCVSCGACVQACP 240 >gi|254228961|ref|ZP_04922383.1| formate dehydrogenase, alpha subunit, putative [Vibrio sp. Ex25] gi|151938638|gb|EDN57474.1| formate dehydrogenase, alpha subunit, putative [Vibrio sp. Ex25] Length = 1422 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 6/105 (5%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQ 198 + WL + + C+ C C +C + ++ Sbjct: 610 QDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLSFVSDKNGRP 669 Query: 199 AYRWLIDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKG 240 A R D R F+ + C C Q+CP G Sbjct: 670 ALR--PDDRPRFRSDEKGASCSGLTLMGNSNCVQCGACVQACPTG 712 >gi|313157248|gb|EFR56678.1| pyruvate synthase [Alistipes sp. HGB5] Length = 1177 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 20/79 (25%), Gaps = 6/79 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDP 221 + C+ C C+ CP +L A E + + P Sbjct: 688 PEWKIENCIQCNQCAYVCP--HAVIRPFLATEAEAAASGVEWKQGLGETKDYKFRIQISP 745 Query: 222 FRLYRCHTIMNCTQSCPKG 240 C NC CP Sbjct: 746 L---DCTGCSNCVDVCPAK 761 >gi|257466134|ref|ZP_05630445.1| anaerobic sulfite reductase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|315917292|ref|ZP_07913532.1| anaerobic sulfite reductase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|313691167|gb|EFS28002.1| anaerobic sulfite reductase subunit A [Fusobacterium gonidiaformans ATCC 25563] Length = 335 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 24/147 (16%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS--------YWWN 186 ++ ++ + + + C+ C C+ +CP+ ++ Sbjct: 186 NIDFVKENKFSIEVPENIDFMHLQSHSMWDEYDTRCIACGRCNFTCPTCTCFSMQDIYYR 245 Query: 187 SDRYLGPAILLQA------YRWLIDSRDEFQGE----RLDNLEDPF------RLYRCHTI 230 ++ +G + A Y + + R L C Sbjct: 246 ENQNVGERRRVWASCQVDGYTRIAGGHSFRNKQGQRMRFKTLHKIHDFKKRFGYNMCVGC 305 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C +CP+ ++ ++AI K+K + ++ Sbjct: 306 GRCDDACPQYISFSEAITKMKNAMDEK 332 >gi|256828378|ref|YP_003157106.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577554|gb|ACU88690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 438 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 3/120 (2%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAI 195 R E K + + + + C C CS +C + D P Sbjct: 14 RGAEKLTPERIEKTINAVFDNEAGARLKAYVDTCAHCGLCSEACHFFLSRDRDPRFSPVG 73 Query: 196 LLQAYRW-LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ W ++D + + E + + + C+ C Q CP G++ ++ ++ ++ Sbjct: 74 KVKQTVWEMLDKKGKVSVEFMKHATQVAQTE-CNLCRRCVQYCPFGIDIGYMMSMVRRIV 132 >gi|224825980|ref|ZP_03699083.1| cytochrome c oxidase accessory protein CcoG [Lutiella nitroferrum 2002] gi|224601617|gb|EEG07797.1| cytochrome c oxidase accessory protein CcoG [Lutiella nitroferrum 2002] Length = 453 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 4/68 (5%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP Y P L AY R E +G + + C C Q Sbjct: 203 CLHMCP-YARFQGAMFDPDTRLVAYDV---PRGEPRGALRKDAQPGVARGDCVDCGLCVQ 258 Query: 236 SCPKGLNP 243 CP G++ Sbjct: 259 VCPTGIDI 266 >gi|52549283|gb|AAU83132.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos26G2] Length = 681 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 19/116 (16%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + K + L D + + +C++C C+ +CP+ + + Sbjct: 373 DQVGEVAVRTALQMDKKRRSLKFILSDDEFKYYVNDCILCGSCTLACPNGLYIGEANKSA 432 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + L D F + C C Q C K + + K Sbjct: 433 AAGN-----------------IKPLADLFDI--CVGCGRCEQVCKKHIPIVDVMTK 469 >gi|117925495|ref|YP_866112.1| oxidoreductase [Magnetococcus sp. MC-1] gi|117609251|gb|ABK44706.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Magnetococcus sp. MC-1] Length = 598 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 3/80 (3%) Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL---EDPFRLYRCHTIMNCTQSCPK 239 Y L PA + + + R + E +D + F RC C +CP Sbjct: 136 YRRPEGHRLTPAARVHMHEMEAEERLDSFTEIVDGYSVTDAQFEADRCVACGLCVATCPA 195 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 ++ IA ++ +R + Sbjct: 196 HMSIPDYIAAVRDGDYERGL 215 Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 25/102 (24%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C C +CP++ D ++ RD L L + Sbjct: 177 QFEADRCVACGLCVATCPAHMSIPD-------------YIAAVRDGDYERGLALLYETNP 223 Query: 224 LYR-----CHTIMNCTQSCPKGLNPAK---AIAKIKMMLLDR 257 C C C +N AI +K + D+ Sbjct: 224 FSNVCGRVCTH--KCETVC--AVNHEGEPIAIRWLKRHIADQ 261 >gi|332298933|ref|YP_004440855.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] gi|332182036|gb|AEE17724.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] Length = 491 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 19/96 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +CV C C +CP + P +A S+DE ER+D ++C Sbjct: 147 EKCVNCGLCMQNCPYHAIIK----IPVPCEEACPVGAISKDETGKERIDY-------HKC 195 Query: 228 HTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 NC + CP G ++ K I K ++ Sbjct: 196 IFCGNCMRECPFGAMMDKSQLVDVLKRIMDGKKVVA 231 >gi|52549204|gb|AAU83053.1| uncharacterized anaerobic dehydrogenase [uncultured archaeon GZfos26D6] Length = 396 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 25/98 (25%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C++C C+ C D +G + + R + R+ L D C Sbjct: 49 ERCILCGLCTRVC-------DELVGVSAINVISRGV--EREVGTP--YKELSDD-----C 92 Query: 228 HTIMNCTQSCP-------KGLNPAKA--IAKIKMMLLD 256 +C CP K + P A IA+++ L+ Sbjct: 93 IGCGSCALVCPTDAIKREKNIYPTTAEDIAELEAKYLE 130 >gi|84489448|ref|YP_447680.1| FdhB [Methanosphaera stadtmanae DSM 3091] gi|84372767|gb|ABC57037.1| FdhB [Methanosphaera stadtmanae DSM 3091] Length = 385 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 7/107 (6%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + K K L +K D L C+ C C CP + ++ Sbjct: 249 QVMKKMAKRTQKKYLETEFTKEEKEDILNRCIKCFRCRDVCPVCNCVTC-------SMEK 301 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + + + + C C +CP + ++ Sbjct: 302 EEFKEHPSQKPDPLLMHGIRLGHMAFSCINCGQCDDACPMEIPVSRL 348 >gi|303228470|ref|ZP_07315301.1| pyruvate synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516828|gb|EFL58739.1| pyruvate synthase [Veillonella atypica ACS-134-V-Col7a] Length = 1179 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWMPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|303231857|ref|ZP_07318568.1| pyruvate synthase [Veillonella atypica ACS-049-V-Sch6] gi|302513464|gb|EFL55495.1| pyruvate synthase [Veillonella atypica ACS-049-V-Sch6] Length = 1179 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWMPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|241667723|ref|ZP_04755301.1| NADH dehydrogenase subunit I [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876267|ref|ZP_05248977.1| NADH-quinone oxidoreductase subunit I [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842288|gb|EET20702.1| NADH-quinone oxidoreductase subunit I [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 162 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V HF+++ +++ + H R+ +G C+ C C Sbjct: 15 ELLKGMRVTGKHFFTRKVTVQY--PDEKTPISNRFRGLHALRRYENGEERCIACKLCEVV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + ID L++C C +SCP Sbjct: 73 CPALAITINSTEREDGSRRTSSYEID------------------LFKCIFCGYCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|288817415|ref|YP_003431762.1| Fe-S oxidoreductase [Hydrogenobacter thermophilus TK-6] gi|152061270|dbj|BAF73688.1| Fe-S oxidoreductase [Hydrogenobacter thermophilus] gi|288786814|dbj|BAI68561.1| Fe-S oxidoreductase [Hydrogenobacter thermophilus TK-6] gi|308751022|gb|ADO44505.1| heterodisulfide reductase [Hydrogenobacter thermophilus TK-6] Length = 436 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 28/117 (23%) Query: 166 GLYECVMCACCSTSC-----------------PSYWW------NSDRYLGPAILLQAYRW 202 L CV C C+ +C P+Y + Y + + + Sbjct: 32 YLEACVRCGICAEACLFYMGENVSGRIDPTLTPAYKADLLRDIYKENYTFVGRIKRLLGF 91 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + E E++ Y C CT++CP G++ K ++ ++ L + Sbjct: 92 GVKITPEDLREQIKLA-----FYTCTNCDRCTKACPMGIDTPKLVSIVRGALTYAGL 143 >gi|13541074|ref|NP_110762.1| hypothetical protein TVN0243 [Thermoplasma volcanium GSS1] Length = 984 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 44/173 (25%), Gaps = 29/173 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKG---------AIAVYPLPHMSVIKDLVVDMSHFY 133 C +C ++++G +C ++ + + M DL + Sbjct: 51 NTCDTCLVDMNGKIVRSCSTYLEQGAKIDYNSNRVLELQREAVQRMLHNHDLYCTVCDNN 110 Query: 134 SQHRSIEPWLK------TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + + + P K + + +C++C C +C N Sbjct: 111 NGDCPLHNAVHDLEIDNQKYPYEPKPYPVDDSNPFYVYDPNQCILCGRCVEACQDVQVNE 170 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + W D C + +C CP Sbjct: 171 TLSIDWSRERPRVVWDNDVPINES--------------SCVSCGHCVTVCPVN 209 >gi|20093186|ref|NP_619261.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanosarcina acetivorans C2A] gi|38503080|sp|Q8THW2|ACDA3_METAC RecName: Full=Acetyl-CoA decarbonylase/synthase complex subunit alpha 3; Short=ACDS complex subunit alpha 3; AltName: Full=ACDS complex carbon monoxide dehydrogenase 3; Short=ACDS CODH 3 gi|19918532|gb|AAM07741.1| carbon-monoxide dehydrogenase, subunit alpha [Methanosarcina acetivorans C2A] Length = 805 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 19/90 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + +CV C C +CP + P L A + E L+ L Sbjct: 406 DEEFKVYIDKCVKCGECMLACP------EELDIPEALEYAAK--------GSYEYLEALH 451 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D C C Q C K + + K Sbjct: 452 DV-----CIGCRRCEQVCKKEIPILNVLEK 476 >gi|260428000|ref|ZP_05781979.1| formate dehydrogenase, alpha subunit [Citreicella sp. SE45] gi|260422492|gb|EEX15743.1| formate dehydrogenase, alpha subunit [Citreicella sp. SE45] Length = 973 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 13/94 (13%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + + +C++C+ C +C + Sbjct: 169 PDGEANPLYMPKDQSNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIEGRGF-------- 220 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR D F C + C Q+CP Sbjct: 221 DSRVSAGA-----AGDDFLASDCVSCGACVQACP 249 >gi|224538208|ref|ZP_03678747.1| hypothetical protein BACCELL_03099 [Bacteroides cellulosilyticus DSM 14838] gi|224520176|gb|EEF89281.1| hypothetical protein BACCELL_03099 [Bacteroides cellulosilyticus DSM 14838] Length = 166 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + + + + C+ C C +CP+ Sbjct: 21 MKTTMTVFCRRKVTEQYPENRATLEMFDRFRGTLTMPHNDRNEHHCIACGLCQIACPN-- 78 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ +I++ D + + L + L C C +CP Sbjct: 79 ----------DTIKVTSEMIETEDGKKKKILAKY--EYDLGSCMFCQLCVTACP 120 >gi|156743326|ref|YP_001433455.1| NADH-quinone oxidoreductase subunit I [Roseiflexus castenholzii DSM 13941] gi|156234654|gb|ABU59437.1| NADH-quinone oxidoreductase, chain I [Roseiflexus castenholzii DSM 13941] Length = 165 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 14/118 (11%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L + + + + ++E V + H+ ++ +G+ C+ C+ C+ +C Sbjct: 5 LFKGLGTTLRYLFRKPVTVEY--PEVKRPVRERFRGRHQLKRFANGMERCIGCSLCAAAC 62 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 P+ + PA A +S E R + RC C +CP Sbjct: 63 PADAIL----VVPAENDPAA---PNSPGERYAARYEINML-----RCIFCGYCEDACP 108 >gi|14324457|dbj|BAB59385.1| formate hydrogenase [Thermoplasma volcanium GSS1] Length = 981 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 46/173 (26%), Gaps = 29/173 (16%) Query: 83 GICGSCGMNIDGTNTLACVK----DMKDIKGAIAVYPLPHMSVIK-----DLVVDMSHFY 133 C +C ++++G +C K + V L +V + DL + Sbjct: 48 NTCDTCLVDMNGKIVRSCSTYLEQGAKIDYNSNRVLELQREAVQRMLHNHDLYCTVCDNN 107 Query: 134 SQHRSIEPWLK------TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + + + P K + + +C++C C +C N Sbjct: 108 NGDCPLHNAVHDLEIDNQKYPYEPKPYPVDDSNPFYVYDPNQCILCGRCVEACQDVQVNE 167 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + W D C + +C CP Sbjct: 168 TLSIDWSRERPRVVWDNDVPINES--------------SCVSCGHCVTVCPVN 206 >gi|94972213|ref|YP_594253.1| formate dehydrogenase, alpha subunit [Deinococcus geothermalis DSM 11300] gi|94554264|gb|ABF44179.1| formate dehydrogenase, alpha subunit [Deinococcus geothermalis DSM 11300] Length = 1004 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 29/171 (16%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVY-------------PLPHMSVIKDLVVDM 129 C +C +N++G +C + + L + + + + Sbjct: 47 QTCDTCLVNVNGELVRSCATCVAAGQTVQTETDAARTSRAAAFDKLLGNHLLYCTVCDNN 106 Query: 130 SHFYSQHRS--IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + H + + V+P K + + +C++C C +C + N Sbjct: 107 NGNCVMHNTTALLKVEHQVTPYQPKPYPKDETNPFYRYDPDQCILCGRCVEACQNLQVNE 166 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + R L D C + +C CP Sbjct: 167 TLTINWEDPHP--RVLWDGGRPINES------------SCVSCGHCVSVCP 203 >gi|302343180|ref|YP_003807709.1| electron transport complex, RnfABCDGE type, C subunit [Desulfarculus baarsii DSM 2075] gi|301639793|gb|ADK85115.1| electron transport complex, RnfABCDGE type, C subunit [Desulfarculus baarsii DSM 2075] Length = 454 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 26/91 (28%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP L PA L + ++ + D L C Sbjct: 380 EPCIHCGRCVQVCPVN-------LIPAELGKMCQY----------GHYEEAADKD-LMHC 421 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C CP + K +L R+ Sbjct: 422 IECGCCAYVCPAKRPMVHLLRLGKTEVLARR 452 >gi|291059567|gb|ADD72302.1| nitrogen fixation protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 494 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 18/88 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ CP YL P + +A R++F E L +L C Sbjct: 394 TSCQNCGDCARICPV-------YLDPIKIARAAH-----RNQFTEEVLQSLRI------C 435 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 H C+ +C + AK + + L Sbjct: 436 HQCGLCSAACTARIPLAKLLHDAQERAL 463 >gi|222444852|ref|ZP_03607367.1| hypothetical protein METSMIALI_00465 [Methanobrevibacter smithii DSM 2375] gi|222434417|gb|EEE41582.1| hypothetical protein METSMIALI_00465 [Methanobrevibacter smithii DSM 2375] Length = 404 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 13/162 (8%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + P ++ + + +++ E + Sbjct: 224 ADPSKTNAEWSISWILNHPEITCVFSGMNNIAQIDENIAIGNSVEPHSMSLEELETIDYA 283 Query: 159 EDRQKIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + K C C C CP +++YL L S ++ Sbjct: 284 KRALKKLLQINCTSCGYCLP-CPRGVNISECMKIYNEKYLF-----NQKGLLNQSLIDYY 337 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + D C+ C + CP+ L+ K + K+K Sbjct: 338 LTVSGIMIDSSNAGLCNGCGKCLRKCPQHLDIPKELDKVKKE 379 >gi|15639145|ref|NP_218591.1| nitrogen fixation protein (rnfC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025385|ref|YP_001933157.1| nitrogen fixation protein [Treponema pallidum subsp. pallidum SS14] gi|3322412|gb|AAC65136.1| nitrogen fixation protein (rnfC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017960|gb|ACD70578.1| nitrogen fixation protein [Treponema pallidum subsp. pallidum SS14] Length = 514 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 18/88 (20%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ CP YL P + +A R++F E L +L C Sbjct: 414 TSCQNCGDCARICPV-------YLDPIKIARAAH-----RNQFTEEVLQSLRI------C 455 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 H C+ +C + AK + + L Sbjct: 456 HQCGLCSAACTARIPLAKLLHDAQERAL 483 >gi|332534244|ref|ZP_08410089.1| type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Pseudoalteromonas haloplanktis ANT/505] gi|332036324|gb|EGI72795.1| type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Pseudoalteromonas haloplanktis ANT/505] Length = 460 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 G + C+ +CP + + + +L+ DS R E +G R + Sbjct: 198 AFCTYGNAGFLREKMCTIACPYSRFQAVMFDKDTLLVTY-----DSERGESRGPRKRKAD 252 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 253 PKELNLGDCVDCNLCVEVCPAGIDI 277 >gi|300788852|ref|YP_003769143.1| D-lactate dehydrogenase [Amycolatopsis mediterranei U32] gi|299798366|gb|ADJ48741.1| D-lactate dehydrogenase [Amycolatopsis mediterranei U32] Length = 911 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 40/151 (26%), Gaps = 27/151 (17%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + I V P P V DL V + + L Sbjct: 460 AIFDPAGRMNPGILVAPRP---VDADLRVRSTP---------------ASFEDSVFLGYP 501 Query: 159 EDR-QKIDGLYECVMCACCSTS------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 EDR + CV C + CPSY + +++ Sbjct: 502 EDRGNFGQAMRRCVGVGKCRNTSGGGVMCPSYRATREEQHSTRGRAHLLAEMLNGEVIKD 561 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + L C + C CP ++ Sbjct: 562 GWRSTEVR--EALDLCLSCKGCLSDCPVDVD 590 >gi|209525025|ref|ZP_03273569.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] gi|209494434|gb|EDZ94745.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] Length = 1192 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 5/96 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LID 205 +K ++ + CV C C CP Y A+ + Sbjct: 667 PTGTSKWEKRNVAQEIPVWDADVCVQCGKCIMVCPHAVIRGKAYDESALNGAPETFKTTA 726 Query: 206 SRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RD+ +G++ P C C CP Sbjct: 727 VRDKAFEGQKFTIQVSPE---DCTGCGVCVDVCPAK 759 >gi|189346715|ref|YP_001943244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] gi|189340862|gb|ACD90265.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 277 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 9/97 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C CP + + +W+ S + + Sbjct: 158 AFWQAEFEKCIKCYACRQVCPMCYCKRC-----IVDNNQPQWVHTSSHTLGNFEWNLVRA 212 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + I + + Sbjct: 213 FHLSGRCVECGGCDRACPVNIPL----RLINRRMANE 245 >gi|258514629|ref|YP_003190851.1| heterodisulfide reductase, C subunit [Desulfotomaculum acetoxidans DSM 771] gi|257778334|gb|ACV62228.1| heterodisulfide reductase, C subunit [Desulfotomaculum acetoxidans DSM 771] Length = 193 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C C C+ CP ++Q + E L ++ C Sbjct: 30 QCYQCGKCTAGCPVALDMDYSPNSIVRMVQL---------GLKDEALR----SQSIWICA 76 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 CT CP+ ++ AK + ++ M + I Sbjct: 77 YCSTCTSRCPRNIDIAKIMDCLRGMAKRQGI 107 >gi|188995522|ref|YP_001929774.1| electron transport complex RnfABCDGE type C subunit [Porphyromonas gingivalis ATCC 33277] gi|188595202|dbj|BAG34177.1| electron transport complex RnfABCDGE type C subunit [Porphyromonas gingivalis ATCC 33277] Length = 443 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + +C+ CA C CP L PA L+ RD Sbjct: 358 EEAVRKPMRDCIRCAKCVGVCPM-------GLNPAFLM---------RDTLYKSW--ETA 399 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + C +C+ +CP I + K ++ Sbjct: 400 EKGNVVDCIECGSCSFTCPANRPLLDYIRQAKKTVM 435 >gi|187780196|ref|ZP_02996669.1| hypothetical protein CLOSPO_03792 [Clostridium sporogenes ATCC 15579] gi|187773821|gb|EDU37623.1| hypothetical protein CLOSPO_03792 [Clostridium sporogenes ATCC 15579] Length = 1172 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 29/105 (27%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-------- 212 + +C+ C CS CP +++AY D +++ Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLDKDEKEKAPDTFETKKAA 727 Query: 213 ----ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 E L+ L C NC CP P KA+ +K Sbjct: 728 GKGLEDLEYRIQISSL-DCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|126659017|ref|ZP_01730158.1| NADH dehydrogenase subunit I [Cyanothece sp. CCY0110] gi|126619674|gb|EAZ90402.1| NADH dehydrogenase subunit I [Cyanothece sp. CCY0110] Length = 196 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 24/123 (19%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 + + L V H + +++ + + P E +C+ C Sbjct: 17 EAAKYIGQGLSVTFDHMRRRPVTVQYPYEKLIPSERYRGRIHFE-------FDKCIACEV 69 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP D + + D + + L + F + C NC + Sbjct: 70 CVRVCPINLPVVD-----------WEFNKD----AKKKELKHYSIDFGV--CIFCGNCVE 112 Query: 236 SCP 238 CP Sbjct: 113 YCP 115 >gi|121593503|ref|YP_985399.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|120605583|gb|ABM41323.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] Length = 480 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 7/78 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLY 225 + C CP Y L+ +Y D R E +G R ++ L Sbjct: 219 AGFLREQVCKYMCP-YARFQSAMFDRDTLVVSY----DPERGEPRGPRNKMVDHKAAGLG 273 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 274 DCIDCTLCVQVCPTGIDI 291 >gi|34540141|ref|NP_904620.1| RnfABCDGE type electron transport complex subunit C [Porphyromonas gingivalis W83] gi|34396453|gb|AAQ65519.1| electron transport complex, RnfABCDGE type, C subunit [Porphyromonas gingivalis W83] Length = 443 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + +C+ CA C CP L PA L+ RD Sbjct: 358 EEAVRKPMRDCIRCAKCVGVCPM-------GLNPAFLM---------RDTLYKSW--ETA 399 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + C +C+ +CP I + K ++ Sbjct: 400 EKGNVVDCIECGSCSFTCPANRPLLDYIRQAKKTVM 435 >gi|87301843|ref|ZP_01084677.1| NADH dehydrogenase subunit I [Synechococcus sp. WH 5701] gi|87283411|gb|EAQ75366.1| NADH dehydrogenase subunit I [Synechococcus sp. WH 5701] Length = 203 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L V H + +++ + + P +E +C+ C C Sbjct: 19 ANYITQGLSVTFDHLRRRPITVQYPYEKLIPSERYRGRIHYE-------FDKCISCEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELKNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|319953472|ref|YP_004164739.1| cytochrome c oxidase accessory protein ccog [Cellulophaga algicola DSM 14237] gi|319422132|gb|ADV49241.1| cytochrome c oxidase accessory protein CcoG [Cellulophaga algicola DSM 14237] Length = 472 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 32/117 (27%), Gaps = 1/117 (0%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 V +++ R IE S + + C +CP Sbjct: 170 VFLAYLIGSDRLIEYVTDGPSQHISTMISLLIFTAVFYFIFAWF-REQVCIIACPYGRMQ 228 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 +I++ +S + + R + + C C CP G++ Sbjct: 229 GVLLDNKSIVVAYDHKRGESENGRKKWRKNEDREALGNGDCIDCFQCVNVCPTGIDI 285 >gi|254994329|ref|ZP_05276519.1| formate dehydrogenase alpha chain [Listeria monocytogenes FSL J2-064] Length = 679 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 25/95 (26%), Gaps = 14/95 (14%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K P K L +C++C C +C N + Sbjct: 32 KQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERS------- 84 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + +R P L C + C CP Sbjct: 85 -QPRVIWDDDR------PANLSSCVSCGLCATVCP 112 >gi|256830711|ref|YP_003159439.1| rhodanese-like domain/cysteine-rich domain- containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579887|gb|ACU91023.1| rhodanese-like domain/cysteine-rich domain- containing protein [Desulfomicrobium baculatum DSM 4028] Length = 366 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 18/98 (18%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 EC C C T C +L + L+ + + + + Sbjct: 12 ALAERISSECTECRACQTRC--------AFLREHGTPKLMADLLLGKGQGRALAFE---- 59 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP L + ++ LD Sbjct: 60 ------CSLCGLCETFCPMHLPLSDFFLSMRRAALDAG 91 >gi|258405237|ref|YP_003197979.1| NIL domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797464|gb|ACV68401.1| NIL domain protein [Desulfohalobium retbaense DSM 5692] Length = 147 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 39/152 (25%), Gaps = 39/152 (25%) Query: 92 IDGTN---TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 G LA ++ ++ P ++ +L F ++ +++ Sbjct: 21 FSGRPIMCNLAKHYELDFNILKASISPRREGKLVLELSGSEEEFQKGLSYLKEHGISIAK 80 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + CV C C+ CP+ S D Sbjct: 81 VSQQISRDE----------DSCVHCGLCTALCPTQAL--------------------SLD 110 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L F + +C CT+ CP Sbjct: 111 HETRHVL------FDVEKCTACGACTRVCPVH 136 >gi|289207348|ref|YP_003459414.1| cytochrome C oxidase accessory protein CcoG [Thioalkalivibrio sp. K90mix] gi|288942979|gb|ADC70678.1| cytochrome c oxidase accessory protein CcoG [Thioalkalivibrio sp. K90mix] Length = 466 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 12/89 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD-------- 216 C+ CP + S + +++ +R E R Sbjct: 199 YTFAGLAREQVCTFICPYARFQSVMFDRDTLIVS----YDQNRGEGTAGRAKVKAGLKTR 254 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C Q CP G++ Sbjct: 255 EERQAAGVGDCIDCGYCVQVCPTGIDIRD 283 >gi|15612252|ref|NP_223905.1| NADH dehydrogenase subunit G [Helicobacter pylori J99] gi|4155777|gb|AAD06753.1| NADH oxidoreductase I [Helicobacter pylori J99] Length = 849 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|294794286|ref|ZP_06759422.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Veillonella sp. 3_1_44] gi|294454616|gb|EFG22989.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Veillonella sp. 3_1_44] Length = 940 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D C+ C C CPS A+L Sbjct: 513 ERILNPDVIITDDPDVYKKNLKAQCVIDDAFTICMECGFCEKHCPSRNLTLTPRQRIALL 572 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + E L + F + C C CP ++ A+ ++ Sbjct: 573 RETKRLENEGNFTLAAE-LKKGYEYFGVDTCAACSMCKGLCPLSIDTAQIALSMRR 627 >gi|256840545|ref|ZP_05546053.1| electron transport complex [Parabacteroides sp. D13] gi|256737817|gb|EEU51143.1| electron transport complex [Parabacteroides sp. D13] Length = 443 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 18/96 (18%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + +C+ CA C CP L P +L+ A + L Sbjct: 358 EESVRKPIRDCIRCAKCVGVCPM-------GLNPTLLMNATEFQN-----------WELA 399 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + + C +C+ +CP + I K ++ Sbjct: 400 EKNYITDCIECGSCSYTCPANRSLLDQIRLGKGKVM 435 >gi|257066535|ref|YP_003152791.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Anaerococcus prevotii DSM 20548] gi|256798415|gb|ACV29070.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Anaerococcus prevotii DSM 20548] Length = 1175 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 21/80 (26%), Gaps = 9/80 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C CS CP +L + D + F Sbjct: 682 PEWQLDNCIQCNQCSYVCP--HAVIRPFLVTEEEKANA---PEGFDTKKAIGKGMEGYEF 736 Query: 223 RLY----RCHTIMNCTQSCP 238 R+ C NC CP Sbjct: 737 RIQVSPLDCTGCGNCADVCP 756 >gi|269798824|ref|YP_003312724.1| FAD linked oxidase [Veillonella parvula DSM 2008] gi|269095453|gb|ACZ25444.1| FAD linked oxidase domain protein [Veillonella parvula DSM 2008] Length = 940 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D C+ C C CPS A+L Sbjct: 513 ERILNPDVIITDDPDVYKKNLKAQCVIDDAFTICMECGFCEKHCPSRNLTLTPRQRIALL 572 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + E L + F + C C CP ++ A+ ++ Sbjct: 573 RETKRLENEGNFTLAAE-LKKGYEYFGVDTCAACSMCKGLCPLSIDTAQIALSMRR 627 >gi|171910298|ref|ZP_02925768.1| cytochrome c oxidase accessory protein FixG [Verrucomicrobium spinosum DSM 4136] Length = 476 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 26/106 (24%), Gaps = 11/106 (10%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC--ACCSTSCPSYWWNSDRYLGPAILL 197 + + P L + C CP S + + Sbjct: 179 QLYAMMQGPPSQHWLAFGVVAFLTASLYFAFSWFREQFCIILCPYGRLQSALTDDHTVNV 238 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 D+ +GE + P C C Q CP G++ Sbjct: 239 --------GYDKTRGEPRGKVNTP-GAGDCINCRRCVQVCPTGIDI 275 >gi|167627161|ref|YP_001677661.1| NADH dehydrogenase subunit I [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189030929|sp|B0TWQ2|NUOI_FRAP2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|167597162|gb|ABZ87160.1| NADH dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 162 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V HF+++ +++ + H R+ +G C+ C C Sbjct: 15 ELLKGMKVTGKHFFTRKVTVQY--PDEKTPISNRFRGLHALRRYENGEERCIACKLCEVV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + ID L++C C +SCP Sbjct: 73 CPALAITINSTEREDGSRRTSSYEID------------------LFKCIFCGYCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|319779328|ref|YP_004130241.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG [Taylorella equigenitalis MCE9] gi|317109352|gb|ADU92098.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG [Taylorella equigenitalis MCE9] Length = 518 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 5/88 (5%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPF 222 + + C CP Y + ++ Y R E +G+R + Sbjct: 223 MFLFAGLLRENICKYMCP-YARFQSVMIDKDTIIVTY---DQKRGEPRGKRKKGSDYKAQ 278 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 L C C Q CP G++ + + Sbjct: 279 GLGDCIDCTMCVQVCPTGIDIRNGLQYM 306 >gi|197116432|ref|YP_002136859.1| heterodisulfide reductase subunit C [Geobacter bemidjiensis Bem] gi|197085792|gb|ACH37063.1| heterodisulfide reductase, subunit C [Geobacter bemidjiensis Bem] Length = 194 Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 ++ L +S + + + C C CS CP + + Sbjct: 1 MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFME------HPPNR 54 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L + + + ++ C + CT CP ++ A + ++ + Sbjct: 55 IVRLLQLGQGQR-------VLAGRSIWYCASCETCTTRCPNKVDLAGIMDALRKL 102 >gi|260892081|ref|YP_003238178.1| formate dehydrogenase, alpha subunit [Ammonifex degensii KC4] gi|260864222|gb|ACX51328.1| formate dehydrogenase, alpha subunit [Ammonifex degensii KC4] Length = 898 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 16/130 (12%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYEC 170 + L L + + + + ++ ED + +C Sbjct: 91 IELLLANHPEDCLTCERTGSCVLQDLAYRYGVRRTRFEGEKRNYPIEDSNPFIVRDMNKC 150 Query: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTI 230 ++C C C + +G A++ AYR + R + LE C Sbjct: 151 ILCGLCVRVC-------NEIMGKAVIDFAYRGV---RTKITPPFELPLEKA----GCVFC 196 Query: 231 MNCTQSCPKG 240 NC CP G Sbjct: 197 GNCVAVCPVG 206 >gi|302544511|ref|ZP_07296853.1| oxidoreductase, FAD-binding [Streptomyces hygroscopicus ATCC 53653] gi|302462129|gb|EFL25222.1| oxidoreductase, FAD-binding [Streptomyces himastatinicus ATCC 53653] Length = 963 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 10/83 (12%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C CPSY + + ++ G R + + Sbjct: 555 RRCVGVAKCRNESVSGASVMCPSYRATGEEQHSTRGRARLLHEMLAGEVVQDGWRSEEVR 614 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 615 DA--LDLCLSCKGCRSDCPVGVD 635 >gi|251777632|ref|ZP_04820552.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081947|gb|EES47837.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1171 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYL---GPAILLQAYRWLIDSRDEFQGERLDNLE 219 +C+ C CS CP +L + LI+ + E+L Sbjct: 684 PEWLQDKCIQCNQCSYVCP--HATIRPFLLNEEEKSKAPSSIKLIEPKALKSDEKLYYSI 741 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C NC + CP P KA+ Sbjct: 742 GVTPL-DCTGCGNCVEVCPA---PGKALI 766 >gi|295835296|ref|ZP_06822229.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain-containing protein [Streptomyces sp. SPB74] gi|197696366|gb|EDY43299.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain-containing protein [Streptomyces sp. SPB74] Length = 991 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLY 225 C+ C C +CPS+ D P + R ++ L + + Sbjct: 583 ADPCIECGFCEPTCPSH----DLTTTPRQRIVLRREMMRQPAGSAVENGLLDAYGYDAVD 638 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C +CP G++ + + + Sbjct: 639 TCAGDSTCKLACPVGIDTGAMMKEFRHQ 666 >gi|188588165|ref|YP_001921458.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum E3 str. Alaska E43] gi|188498446|gb|ACD51582.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum E3 str. Alaska E43] Length = 1172 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYL---GPAILLQAYRWLIDSRDEFQGERLDNLE 219 +C+ C CS CP +L + LI+ + E+L Sbjct: 685 PEWLQDKCIQCNQCSYVCP--HATIRPFLLNEEEKSKAPSSIKLIEPKALKSDEKLYYSI 742 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 L C NC + CP P KA+ Sbjct: 743 GVTPL-DCTGCGNCVEVCPA---PGKALI 767 >gi|157376826|ref|YP_001475426.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319200|gb|ABV38298.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 481 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + S + G + +R E +G R E Sbjct: 214 ALCTYLNAGWMREQMCLHCCPYARFQSAMFDGNTKTVTYDA----TRGESRGPRKRKQET 269 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 270 E--LGDCIDCNLCVDVCPTGIDI 290 >gi|127511743|ref|YP_001092940.1| formate dehydrogenase, alpha subunit [Shewanella loihica PV-4] gi|126637038|gb|ABO22681.1| formate dehydrogenase, alpha subunit [Shewanella loihica PV-4] Length = 1410 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 14/78 (17%) Query: 169 ECVMCACCSTSC------PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C + + D YL + A SR + + D Sbjct: 633 RCISCGACVAMCRQQSGHQAISFEPDSYLALPQEMAA----THSRQAPRAGFSATMADSQ 688 Query: 223 RLYRCHTIMNCTQSCPKG 240 C NC Q CP G Sbjct: 689 ----CVQCGNCVQVCPTG 702 >gi|325998080|gb|ADZ50288.1| D-lactate dehydrogenase [Helicobacter pylori 2017] Length = 946 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 23/137 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGLLNPDVIITNDKEIHTKNLKSIYPIEEHLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + DE Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSHGHDEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKAIA 248 C+ CP ++ +IA Sbjct: 613 MCSTLCPLKID-TGSIA 628 Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERICPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|290967889|ref|ZP_06559439.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Megasphaera genomosp. type_1 str. 28L] gi|290782028|gb|EFD94606.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Megasphaera genomosp. type_1 str. 28L] Length = 1173 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 6/82 (7%) Query: 161 RQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C+ C CS CP + + A Y+ +R + + + Sbjct: 679 HVPSWDAEKCIGCMQCSFVCPHATIRPSLTTKEETAAAPAGYKVAPKAR-AGKQYDVAIV 737 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 D C +C CP Sbjct: 738 VDQD---DCLECGSCVDVCPVD 756 >gi|255505445|ref|ZP_05346142.3| oxidoreductase [Bryantella formatexigens DSM 14469] gi|255268075|gb|EET61280.1| oxidoreductase [Bryantella formatexigens DSM 14469] Length = 413 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 12/121 (9%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 Q + P +E+ E ++ G C C C + CP Sbjct: 296 NEEQLKDNIRTFGEDRPLSEEEMKTLLEIAGQMTGGVPCTACHYCVSHCPQ--------- 346 Query: 192 GPAILLQAYRWLIDS---RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 G I + + S L + + C +C CP+ + ++A+A Sbjct: 347 GLDIPMLLKLYNEHSFTGGGFIAPMALMAVPQEKQPGACLGCRSCEAVCPQQIKISEAMA 406 Query: 249 K 249 Sbjct: 407 D 407 >gi|120597724|ref|YP_962298.1| formate dehydrogenase subunit alpha [Shewanella sp. W3-18-1] gi|120557817|gb|ABM23744.1| formate dehydrogenase, alpha subunit [Shewanella sp. W3-18-1] Length = 1424 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 12/84 (14%) Query: 162 QKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C +C + Y +Y+ L + D Q R + Sbjct: 643 FIQFDANRCISCGKCVDACNQQSGHCVIQFAYD-------SYQALPQTEDLTQERRAPRV 695 Query: 219 EDPFRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 696 GFSASMADSQCVQCGNCVQVCPTG 719 >gi|307637895|gb|ADN80345.1| D-lactate dehydrogenase [Helicobacter pylori 908] gi|325996492|gb|ADZ51897.1| Predicted FAD/FMN-containing D-lactate dehydrogenase/ Fe-S protein [Helicobacter pylori 2018] Length = 946 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 23/137 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGLLNPDVIITNDKEIHTKNLKSIYPIEEHLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + DE Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSHGHDEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKAIA 248 C+ CP ++ +IA Sbjct: 613 MCSTLCPLKID-TGSIA 628 Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERICPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|226939464|ref|YP_002794537.1| NADH dehydrogenase subunit I [Laribacter hongkongensis HLHK9] gi|226714390|gb|ACO73528.1| NuoI [Laribacter hongkongensis HLHK9] Length = 160 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 25/130 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V H +S+ +++ + H R+ +G C+ C C Sbjct: 13 ELVKGMTVTGRHLFSRKITVQY--PEERTPVSPRFRGLHAQRRYPNGEERCIACKLCEAV 70 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ D + R+ ID +C C ++CP Sbjct: 71 CPAMAITIDSEQRADGTRRTTRYEID------------------YQKCIFCGFCEEACP- 111 Query: 240 GLNPAKAIAK 249 AI + Sbjct: 112 ----TDAIVE 117 >gi|134100323|ref|YP_001105984.1| D-lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] gi|291008777|ref|ZP_06566750.1| D-lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] gi|133912946|emb|CAM03059.1| D-lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] Length = 956 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 157 SHEDRQKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 +D CV C + CPSY + ++ R Sbjct: 539 HADDGDLAPASRRCVGMGKCLNTTGGVMCPSYRATREEKHSTRGRAHLLFEMLAGRVITG 598 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + L C + C CP G++ Sbjct: 599 GWRSPEVR--EALDLCLSCKGCKTDCPVGVD 627 >gi|87119910|ref|ZP_01075806.1| probable ferredoxin [Marinomonas sp. MED121] gi|86164612|gb|EAQ65881.1| probable ferredoxin [Marinomonas sp. MED121] Length = 470 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFR 223 + CS CP Y L+ +Y + R E +G+R + + Sbjct: 209 YLFAGWMREQVCSFMCP-YARFQSVMFDTNTLVISYDEV---RGENRGKRKRRADLEALN 264 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 L C C CP G++ Sbjct: 265 LGDCIDCNQCVHVCPAGIDIRD 286 >gi|146294139|ref|YP_001184563.1| formate dehydrogenase subunit alpha [Shewanella putrefaciens CN-32] gi|145565829|gb|ABP76764.1| formate dehydrogenase, alpha subunit [Shewanella putrefaciens CN-32] Length = 1424 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 12/84 (14%) Query: 162 QKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C +C + Y +Y+ L + D Q R + Sbjct: 643 FIQFDANRCISCGKCVDACNQQSGHCVIQFAYD-------SYQALPQTEDLTQERRAPRV 695 Query: 219 EDPFRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 696 GFSASMADSQCVQCGNCVQVCPTG 719 >gi|332535180|ref|ZP_08410987.1| type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Pseudoalteromonas haloplanktis ANT/505] gi|332035399|gb|EGI71899.1| type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Pseudoalteromonas haloplanktis ANT/505] Length = 476 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C CP + S + + +SR E +G R ++ Sbjct: 211 AACTYGNAGWMREIMCLHICPYSRFQSAMFDKDTYTVT----YDESRGESRGPRSRKVDH 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 267 KDLELGDCIDCNLCVQVCPTGIDI 290 >gi|320536266|ref|ZP_08036310.1| hypothetical protein HMPREF9554_01039 [Treponema phagedenis F0421] gi|320146884|gb|EFW38456.1| hypothetical protein HMPREF9554_01039 [Treponema phagedenis F0421] Length = 427 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 17/37 (45%) Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + ++ RC C ++CP ++P + I ++ Sbjct: 343 KEINPAAKISRCRHCGGCVRNCPVYIDPIRIITALER 379 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 18/93 (19%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++ + C C C +CP Y+ P ++ A + D Q R+ Sbjct: 343 KEINPAAKISRCRHCGGCVRNCPV-------YIDPIRIITALERNQYTEDVRQALRI--- 392 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C+ SC + + +AK K Sbjct: 393 --------CRKCGLCSASCASRIPLTEILAKAK 417 >gi|218288430|ref|ZP_03492720.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241403|gb|EED08577.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 994 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 29/198 (14%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM----------- 104 G VLD +L + C +C + IDG AC + Sbjct: 29 GASVLDAILSTGQEHPHVCYHPALGPIETCDTCIVEIDGKLMRACSTPVEDGMVVRTKSV 88 Query: 105 --KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKELLQSHED 160 + + L + + + + + H ++ P K + Sbjct: 89 AARYARKEAMDRILKNHELYCTVCDNNNGNCVLHNTVMQMGVEHQAYPFTPKPYEVDMSN 148 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C++C C +C + L A + R + D+ Sbjct: 149 PFYRYDPQQCILCGRCVEACQNLQV--SEVLSIAWDREVPRVIWDNDVPINES------- 199 Query: 221 PFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 200 -----SCVSCGHCVTVCP 212 >gi|196250631|ref|ZP_03149320.1| formate dehydrogenase, alpha subunit [Geobacillus sp. G11MC16] gi|196209850|gb|EDY04620.1| formate dehydrogenase, alpha subunit [Geobacillus sp. G11MC16] Length = 987 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 42/176 (23%), Gaps = 31/176 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLV 126 C +C ++G+ AC K + L + + + Sbjct: 44 GAIQTCDTCIAEVNGSLLRACSTLVEDGMVVELSSPRAKVAQKEAMDRLLENHLLYCTVC 103 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPS 182 + + H + E P + + E C+ C C +C + Sbjct: 104 DNNNGNCKLHNTAEMMQIEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQN 163 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R + D C + +C CP Sbjct: 164 LQVNETLSIDWEAERP--RVVWDGGVPINES------------SCVSCGHCVTVCP 205 >gi|187778667|ref|ZP_02995140.1| hypothetical protein CLOSPO_02262 [Clostridium sporogenes ATCC 15579] gi|187772292|gb|EDU36094.1| hypothetical protein CLOSPO_02262 [Clostridium sporogenes ATCC 15579] Length = 1192 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L +C+ C CS CP L ++ S+ + L+ Sbjct: 682 PEWQLDKCIQCNQCSYVCP--HAVIRPVLLSDEEVKNAPEGFKSKPAVGAKGLNFTM-AI 738 Query: 223 RLYRCHTIMNCTQSCPKG 240 Y C NC CP Sbjct: 739 SPYDCTGCGNCADVCPAK 756 >gi|319427482|gb|ADV55556.1| molybdopterin-binding oxidoreductase [Shewanella putrefaciens 200] Length = 1424 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 12/84 (14%) Query: 162 QKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 C+ C C +C + Y +Y+ L + D Q R + Sbjct: 643 FIQFDANRCISCGKCVDACNQQSGHCVIQFAYD-------SYQALPQTEDLTQERRAPRV 695 Query: 219 EDPFRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 696 GFSASMADSQCVQCGNCVQVCPTG 719 >gi|120609958|ref|YP_969636.1| NADH dehydrogenase subunit I [Acidovorax citrulli AAC00-1] gi|326316107|ref|YP_004233779.1| NADH-quinone oxidoreductase subunit I [Acidovorax avenae subsp. avenae ATCC 19860] gi|156632696|sp|A1TLM4|NUOI_ACIAC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|120588422|gb|ABM31862.1| NADH dehydrogenase subunit I [Acidovorax citrulli AAC00-1] gi|323372943|gb|ADX45212.1| NADH-quinone oxidoreductase, chain I [Acidovorax avenae subsp. avenae ATCC 19860] Length = 171 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 35 YAFRRKVTVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESDVR 94 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 95 ADGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 124 >gi|300183|gb|AAB26531.1| FdIII=dimeric ferredoxin [Rhodobacter capsulatus, B10, Peptide, 100 aa] Length = 100 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 3/72 (4%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C C + G Q D DE + E + + C Sbjct: 24 KCIGCGRCFKVC---GRDVMSLHGLTEDGQVVAPGTDEWDEVEDEIVKKVMALTGAENCI 80 Query: 229 TIMNCTQSCPKG 240 C + CP Sbjct: 81 GCGACARVCPSE 92 >gi|332526755|ref|ZP_08402857.1| NADH dehydrogenase subunit I [Rubrivivax benzoatilyticus JA2] gi|332111158|gb|EGJ11190.1| NADH dehydrogenase subunit I [Rubrivivax benzoatilyticus JA2] Length = 165 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K + + HF S+ +I+ + H R+ +G C+ C C Sbjct: 18 EIFKGMALTGRHFLSKAITIQY--PEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAV 75 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + R+ ID L +C C +SCP Sbjct: 76 CPAMAITIESDVRADGTRRTTRYDID------------------LTKCIFCGFCEESCPV 117 Query: 240 G 240 Sbjct: 118 D 118 >gi|291514594|emb|CBK63804.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Alistipes shahii WAL 8301] Length = 1157 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 20/79 (25%), Gaps = 6/79 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNLEDP 221 + C+ C C+ CP +L A E + + P Sbjct: 668 PEWKIGNCIQCNQCAYVCP--HAVIRPFLATEEEAAASGVEWKQGLGETKEYKFRIQISP 725 Query: 222 FRLYRCHTIMNCTQSCPKG 240 C NC CP Sbjct: 726 M---DCTGCSNCVDVCPAK 741 >gi|261839984|gb|ACX99749.1| NADH dehydrogenase subunit G [Helicobacter pylori 52] Length = 844 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|242310560|ref|ZP_04809715.1| NADH-quinone oxidoreductase [Helicobacter pullorum MIT 98-5489] gi|239522958|gb|EEQ62824.1| NADH-quinone oxidoreductase [Helicobacter pullorum MIT 98-5489] Length = 816 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 50/197 (25%), Gaps = 38/197 (19%) Query: 72 PTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIKGAI---------AVYPLPHMSV 121 P + C C C + DG AC +KD I + +V Sbjct: 33 PAICYLSCCSPTLACKMCMVEADGKRVYACNAKVKDGMEVIVNTIEIEQERYAIMQAYNV 92 Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCS 177 L + + + L ++ C++C C Sbjct: 93 NHPLQCGVCDKSGECELQNYTHYVGIKEQKYALRDDYKALNHWGKTAYDPNLCIVCERCV 152 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY------------ 225 T C ++A ++ D + + + +D F ++ Sbjct: 153 TLCKDKI--------GKSHIKAIKF--DGQLPNKEYKESMPKDAFGVWTKFKKSLIGVSG 202 Query: 226 --RCHTIMNCTQSCPKG 240 C C CP G Sbjct: 203 EGDCKDCGECASVCPVG 219 >gi|149734|gb|AAB02352.1| mvhB [Methanothermobacter thermautotrophicus] Length = 412 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 22/130 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T + + ++ C C C CP + + LG Sbjct: 209 FELDEDACIGCNTCVEACPGDFIVPRTSNLTVELPAICTACGLCEQLCPVDAIDLEVELG 268 Query: 193 PAILLQAYRWLID----------------------SRDEFQGERLDNLEDPFRLYRCHTI 230 PA + D +++ + + +++ C Sbjct: 269 PAKPASEEGLVWDEEKCDFIGACANICPNDAIRVVTKEGMKVPDNEKVDEEPSFAMCTRC 328 Query: 231 MNCTQSCPKG 240 CT +CPKG Sbjct: 329 GACTVACPKG 338 >gi|45658784|ref|YP_002870.1| hypothetical protein LIC12957 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294827694|ref|NP_710811.2| oxidoreductase-like protein [Leptospira interrogans serovar Lai str. 56601] gi|45602028|gb|AAS71507.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385537|gb|AAN47829.2| oxidoreductase-related protein [Leptospira interrogans serovar Lai str. 56601] Length = 386 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 32/126 (25%), Gaps = 26/126 (20%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + F+ + + + + C+ C C+ +CP Sbjct: 280 TFNSFFDGGEFHSSSEEYFLDIYKHHSIIFVSGKIQERNELPCIECGECTYNCPL----- 334 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 E L N + F C CT CP G++ I Sbjct: 335 ---------------------ECNPISLVNGQGKFFADACIECGICTYLCPSGISIRNKI 373 Query: 248 AKIKMM 253 ++K Sbjct: 374 REVKSR 379 >gi|296444583|ref|ZP_06886547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylosinus trichosporium OB3b] gi|296257851|gb|EFH04914.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylosinus trichosporium OB3b] Length = 447 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 13/89 (14%) Query: 162 QKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQ--GE 213 + C+ C + CPSY DR + A++ L D D Sbjct: 28 NYAKAVAVCMHSRDCHKTGKGVMCPSYRITGDRAHSTEARVAAFKAALNDGSDARAFADP 87 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 RLD D C + C + CP ++ Sbjct: 88 RLDEAMD-----LCVSCKACKKECPSSVD 111 >gi|148244924|ref|YP_001219618.1| intracellular sulfur oxidation protein DsrK [Candidatus Vesicomyosocius okutanii HA] gi|146326751|dbj|BAF61894.1| intracellular sulfur oxidation protein DsrK [Candidatus Vesicomyosocius okutanii HA] Length = 521 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----------SRDEF 210 R L CV C C+ C + +SD P +R + + Sbjct: 66 RSVQVFLDSCVKCGACTDKCHYFLGSSDPKNMPVARQDLFRSVYRRHFTFAGKYFPKLVG 125 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E D++ D ++C C+ CP G++ A+ + +L Sbjct: 126 AKELDDDMLDDWYNYFHQCSQCRRCSVFCPYGIDTAEISMAAREVL 171 >gi|150399888|ref|YP_001323655.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus vannielii SB] gi|150012591|gb|ABR55043.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus vannielii SB] Length = 375 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 43/179 (24%), Gaps = 27/179 (15%) Query: 80 CREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMS 130 R C C + + +AC + + + ++K+ + Sbjct: 179 GRRKNCQRCELKVPRNADIACGNWGSEKRWTFVEICSEKGKELLKNAEKEGYVNIKSPSE 238 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSD 188 IE + T+ K KE L Y C+ C C CP Sbjct: 239 KSLEIRGKIEKSMITLGKKYKKEQLDESYPTTDKWNEYWSRCIKCYSCKDVCPVC----- 293 Query: 189 RYLGPAILLQAYRWLIDSRDEFQ----GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + D D+ + + C C CP + Sbjct: 294 -------FCKECALTEDYLDKGTIPPNPVMFQGIRLSHMSFSCINCGQCEDVCPVEIPL 345 >gi|15679144|ref|NP_276261.1| polyferredoxin (MvhB) [Methanothermobacter thermautotrophicus str. Delta H] gi|41017307|sp|Q50784|MVHB_METTH RecName: Full=Polyferredoxin protein mvhB gi|2622237|gb|AAB85622.1| polyferredoxin (MvhB) [Methanothermobacter thermautotrophicus str. Delta H] Length = 412 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 22/130 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + T + + ++ C C C CP + + LG Sbjct: 209 FELDEDACIGCNTCVEACPGDFIVPRTSNLTVELPAICTACGLCEQLCPVDAIDLEVELG 268 Query: 193 PAILLQAYRWLID----------------------SRDEFQGERLDNLEDPFRLYRCHTI 230 PA + D +++ + + +++ C Sbjct: 269 PAKPASEEGLVWDEEKCDFIGACANICPNDAIRVVTKEGMKVPDNEKVDEEPSFAMCTRC 328 Query: 231 MNCTQSCPKG 240 CT +CPKG Sbjct: 329 GACTVACPKG 338 >gi|284051681|ref|ZP_06381891.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Arthrospira platensis str. Paraca] gi|291570294|dbj|BAI92566.1| pyruvate flavodoxin oxidoreductase [Arthrospira platensis NIES-39] Length = 1193 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 5/96 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LID 205 +K ++ + CV C C CP Y A+ + Sbjct: 667 PTGTSKWEKRNVAQEIPVWDADVCVQCGKCIMVCPHAVIRGKAYDESALNGAPETFKTTA 726 Query: 206 SRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RD+ +G++ P C C CP Sbjct: 727 VRDKAFEGQKFTIQVSPE---DCTGCGICVDVCPAK 759 >gi|160891840|ref|ZP_02072843.1| hypothetical protein BACUNI_04297 [Bacteroides uniformis ATCC 8492] gi|156858318|gb|EDO51749.1| hypothetical protein BACUNI_04297 [Bacteroides uniformis ATCC 8492] Length = 966 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 59/231 (25%), Gaps = 41/231 (17%) Query: 40 KGNPCMDTYYVDLDNC-----GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDG 94 +D Y + G + L +L +K + D L R + + Sbjct: 417 DMKKMLDGYGLSCVYHAHISTGELHLRPVLNLKEEKDRKL-FRTVAT----KTAELVKKH 471 Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 +L+ ++G PL + L+ ++ + +P L Sbjct: 472 RGSLSGEHGDGRLRGEFI--PLLLGDKVYSLLKEVKEIWDSPHIFNMGKIVDTPPMDANL 529 Query: 155 LQSHEDRQKIDGLYE------------CVMCACCS-------TSCPSYWWNSDRYLGPAI 195 D C C T CP+Y D Sbjct: 530 RYEQWDLGIDTYFDYSRQKGWLCAIEQCNGSGDCRKSGLLGGTMCPTYRATRDERNTTRA 589 Query: 196 LLQAYR-WLIDSRDE---FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R LI + Q E L L+ C + C CP ++ Sbjct: 590 RANTLRELLIHPLQKDIFNQEEILTALDT------CVSCKACKSECPSNVD 634 >gi|312183525|gb|ADQ42332.1| CO dehydrogenase/acetyl-CoA synthase A [Methanosaeta harundinacea] Length = 811 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 19/99 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C C C CP + D +++A L+ L Sbjct: 411 EEEFKKYAESCTYCHSCQFVCPPHIKIGD-------VVRA----------AAEGNLEPLS 453 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + + C C Q CP+ + A + + Sbjct: 454 STYEI--CVGCRRCEQVCPQEIPILSLYAYANRDYIRNQ 490 >gi|307352589|ref|YP_003893640.1| aminoglycoside phosphotransferase-like protein [Methanoplanus petrolearius DSM 11571] gi|307155822|gb|ADN35202.1| aminoglycoside phosphotransferase-like protein [Methanoplanus petrolearius DSM 11571] Length = 431 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 30/114 (26%), Gaps = 37/114 (32%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 P+ + P + S R + +C+ C C CP+ Sbjct: 352 YRPFCTFLCPYGLVFSMASRFGRFGLKRTEDCIDCGKCERVCPTVEA------------- 398 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RD + E C+ C + CPK AI K Sbjct: 399 -------GRDGRKAE-------------CYLCGRCIEVCPKD----SAIVFGKR 428 >gi|212703325|ref|ZP_03311453.1| hypothetical protein DESPIG_01368 [Desulfovibrio piger ATCC 29098] gi|212673285|gb|EEB33768.1| hypothetical protein DESPIG_01368 [Desulfovibrio piger ATCC 29098] Length = 383 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 190 YLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 +LGP ++ AY R+ RL L + L+ C NC +CP+G+ + Sbjct: 8 FLGPRMIGPAYERF-----------RLLGLAEEESLHYCANCKNCDIACPQGVPVSSLNM 56 Query: 249 KIKMMLLDRK 258 + +K Sbjct: 57 MARAEQCRKK 66 >gi|170761060|ref|YP_001786579.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A3 str. Loch Maree] gi|169408049|gb|ACA56460.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A3 str. Loch Maree] Length = 1172 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDN 217 + +C+ C CS CP +++AY D +++ + Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKAPSRFETKKAA 727 Query: 218 LEDPFRLY--------RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|168183044|ref|ZP_02617708.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Bf] gi|237794479|ref|YP_002862031.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Ba4 str. 657] gi|182673874|gb|EDT85835.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Bf] gi|229263629|gb|ACQ54662.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum Ba4 str. 657] Length = 1172 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDN 217 + +C+ C CS CP +++AY D +++ + Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKAPSRFETKKAA 727 Query: 218 LEDPFRLY--------RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|148379176|ref|YP_001253717.1| pyruvate-flavodoxin oxidoreductase [Clostridium botulinum A str. ATCC 3502] gi|153932884|ref|YP_001383553.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. ATCC 19397] gi|153936760|ref|YP_001387102.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. Hall] gi|148288660|emb|CAL82741.1| putative pyruvate-flavodoxin oxidoreductase [Clostridium botulinum A str. ATCC 3502] gi|152928928|gb|ABS34428.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. ATCC 19397] gi|152932674|gb|ABS38173.1| pyruvate ferredoxin oxidoreductase [Clostridium botulinum A str. Hall] Length = 1172 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 27/104 (25%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDN 217 + +C+ C CS CP +++AY D +++ + Sbjct: 680 MIPEWQIDKCIQCNQCSYICP------------HSVIRAYLLNKDEKEKAPSTFETKKAA 727 Query: 218 LEDPFRLY--------RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + L C NC CP P KA+ +K Sbjct: 728 GKGLEELGYRIQISPLDCTGCGNCADVCPA---PGKALI-MKNA 767 >gi|90418415|ref|ZP_01226327.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90338087|gb|EAS51738.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 447 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 25/126 (19%) Query: 118 HMSVIKDLVVDMSHFYSQ--HRSIEPWLKTVSPK-PAKELLQSHEDRQKIDGLYECVMCA 174 V+K++ +S + + + SIE + +P + L + + +C+ C Sbjct: 291 GFKVVKEMSSGLSDWMDEKGYASIEDFRGRAAPNVTDWQYLNLNYVTKARIDQDKCISCG 350 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C +C QA ++D R + D C C Sbjct: 351 RCHIACED------------TSHQAITSMLDGI------RKFEVIDEE----CVGCNLCV 388 Query: 235 QSCPKG 240 CP Sbjct: 389 DVCPVE 394 >gi|78778014|ref|YP_394329.1| NADH dehydrogenase subunit I [Sulfurimonas denitrificans DSM 1251] gi|110287777|sp|Q30PI7|NUOI_SULDN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|78498554|gb|ABB45094.1| NADH-quinone oxidoreductase, chain I [Sulfurimonas denitrificans DSM 1251] Length = 211 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 27/114 (23%), Gaps = 18/114 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V + + P + R C+ C C C S Sbjct: 54 LWVVLREMIRFDIHTIQYPLEKMPIGPRYRAVHEMKRLWESDTERCIGCGLCEKICISNC 113 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D L DE R + E L RC C + CP Sbjct: 114 IRIDTKL----------------DENS--RKEVTEYSINLGRCIFCGYCAEVCP 149 >gi|20808874|ref|NP_624045.1| oxidoreductase of the aldo/keto reductase family [Thermoanaerobacter tengcongensis MB4] gi|20517530|gb|AAM25649.1| predicted oxidoreductases of the aldo/keto reductase family [Thermoanaerobacter tengcongensis MB4] Length = 376 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 12/127 (9%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC--STSCPSYWW 185 MS F +IE ++ E L+ + + C C CP+ Sbjct: 253 GMSTFEQLKENIESANRSGIGTLTSEELEIVARVRNKYKELSPIACTGCNYCMPCPNGVN 312 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + +A+ + I E + ++L D + C NC CP+ L Sbjct: 313 IPRNF---ELYNEAHMYNIY---EANRKAYEDLGDA-KASSCIECGNCESVCPQHLPI-- 363 Query: 246 AIAKIKM 252 I +K Sbjct: 364 -IEYLKE 369 >gi|317009950|gb|ADU80530.1| NADH dehydrogenase subunit G [Helicobacter pylori India7] Length = 843 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|317480323|ref|ZP_07939424.1| FAD binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316903498|gb|EFV25351.1| FAD binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 966 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 59/231 (25%), Gaps = 41/231 (17%) Query: 40 KGNPCMDTYYVDLDNC-----GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDG 94 +D Y + G + L +L +K + D L R + + Sbjct: 417 DMKKMLDGYGLSCVYHAHISTGELHLRPVLNLKEEKDRKL-FRTVAT----KTAELVKKH 471 Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 +L+ ++G PL + L+ ++ + +P L Sbjct: 472 RGSLSGEHGDGRLRGEFI--PLLLGDKVYSLLKEVKEIWDSPHIFNMGKIVDTPPMDANL 529 Query: 155 LQSHEDRQKIDGLYE------------CVMCACCS-------TSCPSYWWNSDRYLGPAI 195 D C C T CP+Y D Sbjct: 530 RYEQWDLGIDTYFDYSRQKGWLCAIEQCNGSGDCRKSGLLGGTMCPTYRATRDERNTTRA 589 Query: 196 LLQAYR-WLIDSRDE---FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R LI + Q E L L+ C + C CP ++ Sbjct: 590 RANTLRELLIHPLQKDIFNQEEILTALDT------CVSCKACKSECPSNVD 634 >gi|296165390|ref|ZP_06847931.1| NADH-quinone oxidoreductase subunit I [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899281|gb|EFG78746.1| NADH-quinone oxidoreductase subunit I [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 175 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V S + + + A H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FRVTFSAMFK--KPVTEGYPEKPGPVAPRYHGRHQLNRWPDGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ A +A R+ GER L RC C ++CP Sbjct: 67 --DAIFVESADNTEAERFSP-------GERYGRAYQINYL-RCIGCGFCIEACP 110 >gi|322420727|ref|YP_004199950.1| heterodisulfide reductase subunit [Geobacter sp. M18] gi|320127114|gb|ADW14674.1| heterodisulfide reductase subunit [Geobacter sp. M18] Length = 197 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 13/118 (11%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 +S + +S K + + C C CS CP + Sbjct: 1 MQSSKKAKMQLSNKTMNSDFVKKVETLSGSSVRRCFQCGKCSAGCPMSTFME------HP 54 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R L + E + ++ C + CT CP ++ A + ++ + Sbjct: 55 PNRVVRLLQLGQGER-------ILAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKL 105 >gi|208435160|ref|YP_002266826.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori G27] gi|208433089|gb|ACI27960.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori G27] Length = 854 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|149203250|ref|ZP_01880220.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseovarius sp. TM1035] gi|149143083|gb|EDM31122.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseovarius sp. TM1035] Length = 480 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 5/70 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP + + + W + R + +++ C M C Sbjct: 219 CIYACPWPRIQAAMMDEDTLTVGYREWRGEPRKNS-----EAVKEGAPQGDCIDCMACVN 273 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 274 VCPVGIDIRD 283 >gi|46581201|ref|YP_012009.1| ferredoxin [Desulfovibrio vulgaris str. Hildenborough] gi|120601567|ref|YP_965967.1| ferredoxin [Desulfovibrio vulgaris DP4] gi|46450622|gb|AAS97269.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561796|gb|ABM27540.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio vulgaris DP4] gi|311234870|gb|ADP87724.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio vulgaris RCH1] Length = 295 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 12/95 (12%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + E+ L +C C C +CP + + Sbjct: 145 DCVEVCPFDALHIENGLTHVDLAKCTGCGVCINACPRNTL---ELIPVRARVAVMC---- 197 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 E+L + + + C C ++CP Sbjct: 198 ----STKEKLKAVMEVCEVG-CINCGKCVKACPAH 227 >gi|317014658|gb|ADU82094.1| NADH dehydrogenase subunit G [Helicobacter pylori Gambia94/24] Length = 844 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|282849557|ref|ZP_06258941.1| FAD linked oxidase, C-terminal domain protein [Veillonella parvula ATCC 17745] gi|282580494|gb|EFB85893.1| FAD linked oxidase, C-terminal domain protein [Veillonella parvula ATCC 17745] Length = 940 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D C+ C C CPS A+L Sbjct: 513 ERILNPDVIITDDPDVYKKNLKAQCVIDDAFTICMECGFCEKHCPSRNLTLTPRQRIALL 572 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + E L + F + C C CP ++ A+ ++ Sbjct: 573 RETKRLENEGNFTLAAE-LKKGYEYFGVDTCAACSMCKGLCPLSIDTAQIALSMRR 627 >gi|282163287|ref|YP_003355672.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanocella paludicola SANAE] gi|282155601|dbj|BAI60689.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanocella paludicola SANAE] Length = 138 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 20/105 (19%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +I W+ V P K + D L C+ C C+ +CP + D + Sbjct: 18 ETICAWVHEVVFNPDKGRVIVDLDYPDEHRLRICIQCGRCADACPMDAFYQDFNILTTSE 77 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 YR DE + C C ++CP + Sbjct: 78 QGIYRL-----DESK---------------CTGCGECIEACPTKV 102 >gi|255526794|ref|ZP_05393694.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|255509522|gb|EET85862.1| conserved hypothetical protein [Clostridium carboxidivorans P7] Length = 411 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 15/32 (46%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C ++CP LN I + + ++++ Sbjct: 4 SCTLCGLCKEACPSSLNVKDIIQETRESMVEK 35 >gi|258510840|ref|YP_003184274.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477566|gb|ACV57885.1| formate dehydrogenase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 994 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 29/198 (14%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM----------- 104 G VLD +L + C +C + IDG AC + Sbjct: 29 GASVLDAILSTGQEHPHVCYHPALGPIETCDTCIVEIDGKLMRACSTPVEDGMAVRTKSV 88 Query: 105 --KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW--LKTVSPKPAKELLQSHED 160 + + L + + + + + H ++ P K + Sbjct: 89 AARYARKEAMDRILKNHELYCTVCDNNNGNCVLHNTVMQMGVEHQAYPFTPKPYEVDMSN 148 Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C++C C +C + L A + R + D+ Sbjct: 149 PFYRYDPQQCILCGRCVEACQNLQV--SEVLSIAWDREVPRVIWDNDVPINES------- 199 Query: 221 PFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 200 -----SCVSCGHCVTVCP 212 >gi|301059893|ref|ZP_07200782.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 2 [delta proteobacterium NaphS2] gi|300445999|gb|EFK09875.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 2 [delta proteobacterium NaphS2] Length = 543 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 16/100 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE------- 213 R + CV C C+ C + + D P + + R + R EF Sbjct: 85 RTLKVFMDICVRCGACADKCHFFIGSGDPKNMPVMRAELLRSIY--RGEFTAAGKLLGKF 142 Query: 214 ---RLDNLEDPFRLYR----CHTIMNCTQSCPKGLNPAKA 246 R LE L+ C C+ CP G++ A+ Sbjct: 143 GGGRKLTLETLKELWYYLYQCTECRRCSLFCPYGIDTAEV 182 >gi|227833113|ref|YP_002834820.1| putative oxidoreductase [Corynebacterium aurimucosum ATCC 700975] gi|262182395|ref|ZP_06041816.1| putative oxidoreductase [Corynebacterium aurimucosum ATCC 700975] gi|227454129|gb|ACP32882.1| putative oxidoreductase [Corynebacterium aurimucosum ATCC 700975] Length = 973 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 9/118 (7%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ L + + CV C C CPS + P Sbjct: 535 KGILAPNVKLTRDQTIHLRNFKSFPKVEAEINPCVECGFCEPVCPSRHAT----VTPRQR 590 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R + R + L+ L+ + C C+ CP ++ + +++ Sbjct: 591 IVLRREMA--RQQEGSAVLEQLQKEYQYDAVDMCAADGTCSIPCPISIDTGAVMKQLR 646 >gi|149927549|ref|ZP_01915803.1| NADH dehydrogenase subunit I [Limnobacter sp. MED105] gi|149823822|gb|EDM83048.1| NADH dehydrogenase subunit I [Limnobacter sp. MED105] Length = 163 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + M + ++Q I + H R+ +G C+ C C Sbjct: 16 EMLKGMALTMGYMFTQ--PITVLYPMEKTPMSPRFRGLHALRRYENGEERCIACKLCEAV 73 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L +C C +SCP Sbjct: 74 CPAMAITIESEQREDGTRRTSRYDID------------------LTKCIFCGFCEESCPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|124485287|ref|YP_001029903.1| formate dehydrogenase, beta subunit (F420) [Methanocorpusculum labreanum Z] gi|124362828|gb|ABN06636.1| formate dehydrogenase, beta subunit (F420) [Methanocorpusculum labreanum Z] Length = 414 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 28/111 (25%), Gaps = 10/111 (9%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYL 191 + ++ + + + DR K C+ C C +CP + Sbjct: 254 DKIENVMVKMGKKNQAKQFAEIGEGTDRLKYIMAETGRCIKCYGCIENCPICYCVECSTK 313 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 P L+ + C CT CP+ + Sbjct: 314 KPH--------LVRPGQVPPDFMFQMIRFAHIADSCVNCGQCTDVCPQNIP 356 >gi|119475938|ref|ZP_01616290.1| Polyferredoxin [marine gamma proteobacterium HTCC2143] gi|119450565|gb|EAW31799.1| Polyferredoxin [marine gamma proteobacterium HTCC2143] Length = 470 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 9/63 (14%) Query: 190 YLGPAILLQAYRWLIDS--------RDEFQGERLDNLEDPF-RLYRCHTIMNCTQSCPKG 240 Y+ P QA + D+ R E +G R + E L C C Q CP G Sbjct: 219 YMCPYARFQAAMFDSDTLIVSYDAKRGEARGPRKRSAEPAELGLGDCIDCTMCVQVCPTG 278 Query: 241 LNP 243 ++ Sbjct: 279 IDI 281 >gi|327398405|ref|YP_004339274.1| NAD(P)H-quinone oxidoreductase subunit I [Hippea maritima DSM 10411] gi|327181034|gb|AEA33215.1| NAD(P)H-quinone oxidoreductase subunit I [Hippea maritima DSM 10411] Length = 139 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 19/119 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K L V + + +++ + + + + L + E + + +C+ C C Sbjct: 5 DLRKGLSVTIKYLFTRPVTCQYPNERLEVPERGRWLHALEKFEDSGKI-KCIDCGLCERV 63 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPS A + +D L RC C + CP Sbjct: 64 CPSKCIKITPIENEDHTKNAAEYELD------------------LGRCLFCGLCVEVCP 104 >gi|326405999|gb|ADZ63070.1| pyruvate dehydrogenase [Lactococcus lactis subsp. lactis CV56] Length = 1193 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L D + L Sbjct: 686 PEWNAQACIQCNECSFVCP--HAAIRPFLVDEDEWNQAPEGFHVMDYKGADGLKYRIQV- 742 Query: 223 RLYRCHTIMNCTQSCPKG 240 + C C ++CPK Sbjct: 743 SVEDCTGCGLCVEACPKK 760 >gi|281490964|ref|YP_003352944.1| pyruvate dehydrogenase [Lactococcus lactis subsp. lactis KF147] gi|281374722|gb|ADA64242.1| Pyruvate dehydrogenase (ferredoxin/flavodoxin-dependent) [Lactococcus lactis subsp. lactis KF147] Length = 1223 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L D + L Sbjct: 683 PEWNAQACIQCNECSFVCP--HAAIRPFLVDEDEWNQAPEGFHVMDYKGADGLKYRIQV- 739 Query: 223 RLYRCHTIMNCTQSCPKG 240 + C C ++CPK Sbjct: 740 SVEDCTGCGLCVEACPKK 757 >gi|221640575|ref|YP_002526837.1| Formate dehydrogenase subunit alpha [Rhodobacter sphaeroides KD131] gi|221161356|gb|ACM02336.1| Formate dehydrogenase, alpha subunit [Rhodobacter sphaeroides KD131] Length = 960 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 13/106 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + K + + + +C++C+ C +C + Sbjct: 144 YEAVENHFTPRNAGGDLNPKWMAKDESNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIE 203 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR D F C + C Q+CP Sbjct: 204 GRGF--------DSRVSA-----GMASDSFLTSDCVSCGACVQACP 236 >gi|209886459|ref|YP_002290316.1| cytochrome c oxidase accessory protein CcoG [Oligotropha carboxidovorans OM5] gi|209874655|gb|ACI94451.1| cytochrome c oxidase accessory protein CcoG [Oligotropha carboxidovorans OM5] Length = 519 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 36/165 (21%), Gaps = 18/165 (10%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 + + +D A + K I + +I L FY Sbjct: 144 DRNARIKLDAAPWSAGKLIKRVTKHLIWL-------IIAVLTGGAWIFYFADAPTLLRNL 196 Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAY 200 + + C+ CP + L + + Sbjct: 197 VTGHAEPVAYITIAILTGTTYVFGGLMREQVCTYMCPWPRIQAAMLDENSL--TVTYNDW 254 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 R SR + + C C CP G++ Sbjct: 255 RGEPRSRHAKKAAAAGQA-----VGDCVDCNACVAVCPMGIDIRD 294 >gi|15672404|ref|NP_266578.1| pyruvate-flavodoxin oxidoreductase [Lactococcus lactis subsp. lactis Il1403] gi|12723298|gb|AAK04520.1|AE006279_2 pyruvate-flavodoxin oxidoreductase [Lactococcus lactis subsp. lactis Il1403] Length = 1190 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L D + L Sbjct: 683 PEWNAQACIQCNECSFVCP--HAAIRPFLVDEDEWNQAPEGFHVMDYKGADGLKYRIQV- 739 Query: 223 RLYRCHTIMNCTQSCPKG 240 + C C ++CPK Sbjct: 740 SVEDCTGCGLCVEACPKK 757 >gi|50554865|ref|XP_504841.1| YALI0F00924p [Yarrowia lipolytica] gi|6689658|emb|CAB65524.1| subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) [Yarrowia lipolytica] gi|49650711|emb|CAG77643.1| YALI0F00924p [Yarrowia lipolytica] Length = 229 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + L V + F+ + + H R+ G C+ C C Sbjct: 82 EMFRGLYVVLEQFFR--APYTIYYPFEKGPVSPRFRGEHALRRYPSGEERCIACKLCEAI 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ D + ++ ID +C C +SCP Sbjct: 140 CPALAITIDAEERIDGSRRTTKYDIDMT------------------KCIYCGYCQESCPV 181 Query: 240 G 240 Sbjct: 182 D 182 >gi|330997242|ref|ZP_08321095.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] gi|329571037|gb|EGG52744.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] Length = 165 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 14/110 (12%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 F + P + + + E + CV C C +CP + Sbjct: 29 FFRKKVTEQYPENRHTTLYIPERHRAQLEMIHDDRNQHHCVACGLCQMACP------NDT 82 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++ D ++ ++ + L C C +CP G Sbjct: 83 IRVVSEVR--------EDAEGKKKKYLVKYEYDLGSCMFCQLCVNACPHG 124 >gi|313159561|gb|EFR58924.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 111 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 15/100 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +S E ++ L C+ C C+ C + + + R Sbjct: 24 RKSDEILHEMPELQACIGCGACTAVCTAGNLT--EFNFRKVHTLVRRGEYQG-------A 74 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +C C CP+G+N + IK L Sbjct: 75 YEEMN------KCMLCGKCRLVCPRGINTRGVVMLIKRKL 108 >gi|313115124|ref|ZP_07800611.1| oxidoreductase, aldo/keto reductase family protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622564|gb|EFQ06032.1| oxidoreductase, aldo/keto reductase family protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 378 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP D + + + +D + + D + C Sbjct: 297 CTGCRYCMP-CPMGVDIPDNF-----SIWNKLGMFGQKDAIKAQWTTCFPDSEKALHCVR 350 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 C CP+ L ++A+++ L Sbjct: 351 CGKCEAVCPQKLPIRDSLAQLQKEL 375 >gi|218892493|ref|YP_002441360.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|218772719|emb|CAW28504.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 471 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R +L+ L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEKRGPRKKSLDYKAQGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|317013054|gb|ADU83662.1| NADH dehydrogenase subunit G [Helicobacter pylori Lithuania75] Length = 854 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|312143349|ref|YP_003994795.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Halanaerobium sp. 'sapolanicus'] gi|311904000|gb|ADQ14441.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Halanaerobium sp. 'sapolanicus'] Length = 449 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 14/109 (12%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 ++ + + E+ Q + K C+ C C+ CP Y L P + Sbjct: 224 KTAGSIIILPKKQFVIEMNQQSMEHIKNKAEAACIQCTFCTEYCPRY-LIGHENLEPHRI 282 Query: 197 LQAYRWL-IDSRDEFQGERLDNLEDPFRLYRCHTIMNCT-QSCPKGLNP 243 ++A + D+ D F+ +L C C +CP GL+P Sbjct: 283 MRALAYEKEDNTDIFKTAQL-----------CCECGICELYACPMGLSP 320 >gi|294673934|ref|YP_003574550.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella ruminicola 23] gi|294474000|gb|ADE83389.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella ruminicola 23] Length = 1191 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 26/88 (29%), Gaps = 4/88 (4%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E + C+ C C+ CP ++ L+ + D+ + Sbjct: 675 YEKRGVEAFVPVWNKDNCIQCNQCAYICP--HAAIRPFVLDDEELKGFAAAADTLEMKAP 732 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 + + + C NC CP Sbjct: 733 AAMKGMHFRIETSVLDCLGCGNCADICP 760 >gi|294792492|ref|ZP_06757639.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Veillonella sp. 6_1_27] gi|294456391|gb|EFG24754.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Veillonella sp. 6_1_27] Length = 940 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D C+ C C CPS A+L Sbjct: 513 ERILNPDVIITDDPDVYKKNLKAQCVIDDAFTICMECGFCEKHCPSRNLTLTPRQRIALL 572 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + E L + F + C C CP ++ A+ ++ Sbjct: 573 RETKRLENEGNFTLAAE-LKKGYEYFGVDTCAACSMCKGLCPLSIDTAQIALSMRR 627 >gi|15596748|ref|NP_250242.1| ferredoxin [Pseudomonas aeruginosa PAO1] gi|107100981|ref|ZP_01364899.1| hypothetical protein PaerPA_01002011 [Pseudomonas aeruginosa PACS2] gi|116049495|ref|YP_791702.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|254234652|ref|ZP_04927975.1| hypothetical protein PACG_00519 [Pseudomonas aeruginosa C3719] gi|254239899|ref|ZP_04933221.1| hypothetical protein PA2G_00528 [Pseudomonas aeruginosa 2192] gi|296390079|ref|ZP_06879554.1| putative ferredoxin [Pseudomonas aeruginosa PAb1] gi|313106556|ref|ZP_07792784.1| putative ferredoxin [Pseudomonas aeruginosa 39016] gi|9947511|gb|AAG04940.1|AE004583_5 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|115584716|gb|ABJ10731.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|126166583|gb|EAZ52094.1| hypothetical protein PACG_00519 [Pseudomonas aeruginosa C3719] gi|126193277|gb|EAZ57340.1| hypothetical protein PA2G_00528 [Pseudomonas aeruginosa 2192] gi|310879286|gb|EFQ37880.1| putative ferredoxin [Pseudomonas aeruginosa 39016] Length = 471 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R +L+ L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEKRGPRKKSLDYKAQGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|308185014|ref|YP_003929147.1| NADH dehydrogenase subunit G [Helicobacter pylori SJM180] gi|308060934|gb|ADO02830.1| NADH dehydrogenase subunit G [Helicobacter pylori SJM180] Length = 854 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|238758664|ref|ZP_04619839.1| Pyruvate-flavodoxin oxidoreductase [Yersinia aldovae ATCC 35236] gi|238703175|gb|EEP95717.1| Pyruvate-flavodoxin oxidoreductase [Yersinia aldovae ATCC 35236] Length = 1177 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 9/94 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + PA + A DS Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPAAMSGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG 240 + D + L C C + CP Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAK 758 >gi|307637937|gb|ADN80387.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori 908] gi|325996541|gb|ADZ51946.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori 2018] gi|325998130|gb|ADZ50338.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori 2017] Length = 853 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|253996091|ref|YP_003048155.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] gi|253982770|gb|ACT47628.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] Length = 481 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYR 226 + C CP + S + +++ ++R E +G R ++ L Sbjct: 215 AGFMREQVCKYMCPYARFQSAMFDDDTLVVT----YDEARGEPRGSRSRKVDSTNHNLGS 270 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 271 CIDCSMCVQVCPTGIDI 287 >gi|239831225|ref|ZP_04679554.1| cytochrome c oxidase accessory protein CcoG [Ochrobactrum intermedium LMG 3301] gi|239823492|gb|EEQ95060.1| cytochrome c oxidase accessory protein CcoG [Ochrobactrum intermedium LMG 3301] Length = 527 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 19/82 (23%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-LDNLEDPFR 223 + C+ CP D R E + + Sbjct: 226 YVFGGLMREQVCTYMCP----WPRIQAAMLDENSLTVTYNDWRGEPRSRHSKKAIAAGET 281 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C +CP G++ Sbjct: 282 VGDCVDCNACVAACPMGIDIRD 303 >gi|218711009|ref|YP_002418630.1| putative nitrogen fixation protein fixG [Vibrio splendidus LGP32] gi|218324028|emb|CAV20390.1| putative nitrogen fixation protein fixG [Vibrio splendidus LGP32] Length = 472 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + Y R E +G R + Sbjct: 211 AGCTYANAGWMRSIVCLHMCP-YARFQSAMFDKDTFIVGYDTE---RGESRGPRSRKADP 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 267 KELGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|152981162|ref|YP_001353325.1| 4Fe-4S ferredoxin, iron sulfur binding [Janthinobacterium sp. Marseille] gi|151281239|gb|ABR89649.1| 4Fe-4S ferredoxin, iron sulfur binding [Janthinobacterium sp. Marseille] Length = 466 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 3/74 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + ++++ R + R C C Q Sbjct: 212 CKYMCPYARFQSSMFDKDSLIISYDRKRGEPRGMSNKHSAAA---GLSFGACIDCSMCVQ 268 Query: 236 SCPKGLNPAKAIAK 249 CP G++ + Sbjct: 269 VCPVGIDIRDGLQY 282 >gi|138894138|ref|YP_001124591.1| formate dehydrogenase chain A [Geobacillus thermodenitrificans NG80-2] gi|134265651|gb|ABO65846.1| Formate dehydrogenase chain A [Geobacillus thermodenitrificans NG80-2] Length = 988 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 31/176 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLV 126 C +C ++GT AC K ++ L + + + Sbjct: 45 GAIQTCDTCIAEVNGTLLRACSTLVEDGMVVELSSPRAKVVQKEAMDRLLENHLLYCTVC 104 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPS 182 + + H + E P + + E C+ C C +C + Sbjct: 105 DNNNGNCKLHNTTEMMQIEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQN 164 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R + D C + +C CP Sbjct: 165 LQVNETLSIDWEAERP--RVVWDGGVPINES------------SCVSCGHCVTVCP 206 >gi|86147140|ref|ZP_01065456.1| FixG-related protein [Vibrio sp. MED222] gi|85835024|gb|EAQ53166.1| FixG-related protein [Vibrio sp. MED222] Length = 472 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + Y R E +G R + Sbjct: 211 AGCTYANAGWMRSIVCLHMCP-YARFQSAMFDKDTFIVGYDTE---RGESRGPRSRKADP 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 267 KELGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|84393430|ref|ZP_00992187.1| FixG-related protein [Vibrio splendidus 12B01] gi|84375946|gb|EAP92836.1| FixG-related protein [Vibrio splendidus 12B01] Length = 472 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + Y R E +G R + Sbjct: 211 AGCTYANAGWMRSIVCLHMCP-YARFQSAMFDKDTFIVGYDTE---RGESRGPRSRKADP 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 267 KELGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|158520468|ref|YP_001528338.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfococcus oleovorans Hxd3] gi|158509294|gb|ABW66261.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfococcus oleovorans Hxd3] Length = 549 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 18/112 (16%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C Y D P + + R + + G+ + + Sbjct: 84 RTFKVFMDICVRCGACADKCHFYLGTGDPKNMPVLRAELLRSVYRNDFTSAGKIIKKVFG 143 Query: 221 PF-----------------RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 ++C C+ CP G++ A+ I + LL Sbjct: 144 RNISGARDLTLDVLKEWWYYFFQCTECRRCSVFCPYGIDTAE-ITIMGRELL 194 >gi|294054997|ref|YP_003548655.1| cytochrome c oxidase accessory protein CcoG [Coraliomargarita akajimensis DSM 45221] gi|293614330|gb|ADE54485.1| cytochrome c oxidase accessory protein CcoG [Coraliomargarita akajimensis DSM 45221] Length = 467 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 9/112 (8%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 ++ + W+ + + + + + C CP S Sbjct: 173 YFISIPELYQWMTKSPTEHWEAFVFVFVSSAILYFNFSWFREQLCLVICPYGRLQSALID 232 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ++++ + R + E + C C Q CP G++ Sbjct: 233 DDSVVIGYDEARGEPRGPAKKE---------GVGDCVNCQRCVQVCPTGIDI 275 >gi|294142319|ref|YP_003558297.1| iron-sulfur cluster-binding protein [Shewanella violacea DSS12] gi|293328788|dbj|BAJ03519.1| iron-sulfur cluster-binding protein [Shewanella violacea DSS12] Length = 507 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 22/83 (26%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + AY SR E +G R Sbjct: 236 AICTYINAAWMREMVCLHLCP-YARFQSAMFDANTITVAYDP---SRGESRGPRKRKQAT 291 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 292 D--LGDCIDCNLCVDVCPTGIDI 312 >gi|210135425|ref|YP_002301864.1| NADH dehydrogenase subunit G [Helicobacter pylori P12] gi|210133393|gb|ACJ08384.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori P12] Length = 844 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|197106271|ref|YP_002131648.1| Polyferredoxin [Phenylobacterium zucineum HLK1] gi|196479691|gb|ACG79219.1| Polyferredoxin [Phenylobacterium zucineum HLK1] Length = 508 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 5/79 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ CP L L YR+ R E +G + Sbjct: 237 YIFAGHMREQVCTYMCPWPRIQG-AMLDHHSLQVTYRYD---RGEPRGPHKKG-QPWEGR 291 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C +CP G++ Sbjct: 292 GDCIDCNACVVACPMGIDI 310 >gi|156933858|ref|YP_001437774.1| hypothetical protein ESA_01684 [Cronobacter sakazakii ATCC BAA-894] gi|156532112|gb|ABU76938.1| hypothetical protein ESA_01684 [Cronobacter sakazakii ATCC BAA-894] Length = 1173 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 28/109 (25%), Gaps = 10/109 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCP---SYWWNSDRYLGPAILLQAYRWLIDSR 207 + ++ + I C C C +CP + SR Sbjct: 670 TQWEKRNIAEEIPIWKEALCTQCNHCVAACPHSAIRAKVVAPDALADAPASLAALDVKSR 729 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG---LNPAKAIAKIKMM 253 D + + + C C + CP KAI + + Sbjct: 730 DMRGQKYVLQVAPED----CTGCNLCVEVCPAKDRQNPEIKAINMMSRL 774 >gi|283953802|ref|ZP_06371333.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 414] gi|283794843|gb|EFC33581.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding [Campylobacter jejuni subsp. jejuni 414] Length = 923 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 11/124 (8%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID---------GLYECVMCACCSTSCPSY 183 Y ++ I+ + ++ + +D K + L C+ C C CPS Sbjct: 491 YEINKKIKSIFDKDNLFNPDVIISNDKDIYKKNIKQASLIDEKLNTCMECGFCERFCPSN 550 Query: 184 WWNSDRYLGPAILLQAYRW--LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + AIL + R L D+ + + + + + C C+ SCP G+ Sbjct: 551 EYTITPRQRIAILREIKRLESLNDNVSKVKLKDIKKYYNHLVDSSCAACGVCSFSCPLGI 610 Query: 242 NPAK 245 N A Sbjct: 611 NFAD 614 >gi|168187508|ref|ZP_02622143.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum C str. Eklund] gi|169294609|gb|EDS76742.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium botulinum C str. Eklund] Length = 1168 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 4/85 (4%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP + + +GE+L + Sbjct: 681 PEWSMENCIQCNQCSYVCPHAVIRPTLLTEEEYKNKPEGFKAVEAKGIKGEKLYYSMNV- 739 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 + C NC + CP P KA+ Sbjct: 740 SVLDCTGCGNCAEVCPA---PTKAL 761 >gi|76801510|ref|YP_326518.1| iron-sulfur protein ( electron transport protein)/ iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] gi|76557375|emb|CAI48952.1| predicted iron-sulfur protein (probable electron transport protein)/ iron-sulfur protein (probable glycolate oxidase iron-sulfur subunit) [Natronomonas pharaonis DSM 2160] Length = 725 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 14/79 (17%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLG----PAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C CS SC ++ G + + + D + D Sbjct: 317 YCIRCGACSNSCANFQSVGGHAFGGETYTGGIGTGWEAGVYGLDSAAE-----MND---- 367 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C + CP ++ Sbjct: 368 -LCTGCSRCVEKCPVKIDI 385 >gi|325969844|ref|YP_004246036.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] gi|323709047|gb|ADY02534.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] Length = 448 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 13/89 (14%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP Y +A D + D + C Sbjct: 114 CTGCGTCEEVCPV--VLPKEYDYGLRGRKAAYIPFD-----TAVPKKAVID---IDNCIF 163 Query: 230 IMNCTQSCPKG-LNPAKA--IAKIKMMLL 255 C + CP G ++ + I KIK + Sbjct: 164 CGQCERECPAGAIDFTQKPTIYKIKAHAI 192 >gi|297380446|gb|ADI35333.1| NADH-quinone oxidoreductase subunit G [Helicobacter pylori v225d] Length = 844 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|289423453|ref|ZP_06425257.1| sulfite reductase, subunit A [Peptostreptococcus anaerobius 653-L] gi|289156211|gb|EFD04872.1| sulfite reductase, subunit A [Peptostreptococcus anaerobius 653-L] Length = 334 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 26/156 (16%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + F + + V LQ HE + D C+ C C+ +CP+ S Sbjct: 181 CQTDFEVDYVRENKFSIDVPENVDFTYLQGHEMWDEYD--ARCIACGRCNFTCPTCTCFS 238 Query: 188 ------------------------DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D Y A ++ + ++ F Sbjct: 239 MQDIFYKENPNAGERRRVWSSCQVDGYTSIAGGHAFRNKHGQRMRFKTMHKIHDFKERFG 298 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP+ ++ ++AI K+ + ++ + Sbjct: 299 YNMCVGCGRCDDACPQYISFSEAIEKVNKAMKEKDL 334 >gi|158320980|ref|YP_001513487.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141179|gb|ABW19491.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Alkaliphilus oremlandii OhILAs] Length = 1176 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 8/89 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNL 218 + +C+ C CS CP +L ++ +++D E L Sbjct: 680 MIPQWQIEKCIQCNQCSYVCP--HAVIRPFLLDEKEMKQKPADFETKDAMGKGVEHLQYR 737 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP P KA+ Sbjct: 738 IQVSPL-DCTGCGNCADICPA---PGKAL 762 >gi|332158425|ref|YP_004423704.1| hypothetical protein PNA2_0784 [Pyrococcus sp. NA2] gi|331033888|gb|AEC51700.1| hypothetical protein PNA2_0784 [Pyrococcus sp. NA2] Length = 649 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 27/89 (30%), Gaps = 30/89 (33%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 YECV C C T+CP + D +R + P + Sbjct: 573 RAYECVGCGVCVTTCPEEAISID-----------------------DKRKKIVVFPEK-- 607 Query: 226 RCHTIMNCTQSCP----KGLNPAKAIAKI 250 C C CP KG++ I + Sbjct: 608 -CTHCRECMSVCPLVVIKGVDKIIIIIHL 635 >gi|325479256|gb|EGC82352.1| pyruvate synthase [Anaerococcus prevotii ACS-065-V-Col13] Length = 1175 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 21/80 (26%), Gaps = 9/80 (11%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 L C+ C CS CP +L + D + F Sbjct: 682 PEWQLDNCIQCNQCSFVCP--HAVIRPFLVTEDEKANA---PEGFDTKKAIGKGMEGYEF 736 Query: 223 RLY----RCHTIMNCTQSCP 238 R+ C NC CP Sbjct: 737 RIQVSPLDCTGCGNCADVCP 756 >gi|317126171|ref|YP_004100283.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Intrasporangium calvum DSM 43043] gi|315590259|gb|ADU49556.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Intrasporangium calvum DSM 43043] Length = 1201 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 15/94 (15%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + D C+ C C+ CP + +Y P + LID+ F Sbjct: 687 WEKRRISDVVAQWDPDSCIQCGNCAFVCP-HSVIRSKYYDPDV-------LIDAPGAFPS 738 Query: 213 ERLDNLEDPFR-------LYRCHTIMNCTQSCPK 239 L+ P + C C +CP Sbjct: 739 APLNAAGLPGSRYTLQVYVEDCTGCGLCVDTCPV 772 >gi|315605208|ref|ZP_07880254.1| D-lactate dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313025|gb|EFU61096.1| D-lactate dehydrogenase [Actinomyces sp. oral taxon 180 str. F0310] Length = 1038 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 9/81 (11%) Query: 168 YECVMCACCST------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C C CPSY + + + +SR + + L Sbjct: 577 HRCTGVGKCRAGVSGTFMCPSYLATREEKDVTRGRARILQEAANSRLVRAIDSPEVL--- 633 Query: 222 FRLYRCHTIMNCTQSCPKGLN 242 L C C+ CP G++ Sbjct: 634 EALDLCLACKACSADCPAGVD 654 >gi|308049911|ref|YP_003913477.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] gi|307632101|gb|ADN76403.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] Length = 1005 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 38/135 (28%), Gaps = 28/135 (20%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRYLGP 193 + + + A S + R++ + C C CPSY + DR P Sbjct: 543 QLYPVESPSRGAFNRRISPQSREEYERAIRCNGNGLCFNYQVDSPMCPSYKASGDRVESP 602 Query: 194 AILLQAYRWLID-------------SRDEFQGERLDNLEDPF---------RLYRCHTIM 231 + YR + R +R+ N + C Sbjct: 603 KGRAELYRAWLRLLAREGVDLAQYPPRPAPLWQRVRNQFSNEVDFSHEVHAGMLSCLACK 662 Query: 232 NCTQSCPKGLNPAKA 246 C+ +CP ++ Sbjct: 663 ACSGACPVKVDIPTL 677 >gi|269128605|ref|YP_003301975.1| NADH-quinone oxidoreductase subunit I [Thermomonospora curvata DSM 43183] gi|268313563|gb|ACY99937.1| NADH-quinone oxidoreductase, chain I [Thermomonospora curvata DSM 43183] Length = 194 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 14/121 (11%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 ++ +K V + + +++ P + DGL +C+ C C+ Sbjct: 6 FLNPVKGFGVAFHQMFQKSETVQYPEVKKPTAPRFHGRHQL--NRWPDGLEKCIGCELCA 63 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 +CP+ Y+ A + R+ GER + L RC C ++C Sbjct: 64 WACPA----DAIYVEAADNTEEERYSP-------GERYGRVYQINYL-RCILCGMCIEAC 111 Query: 238 P 238 P Sbjct: 112 P 112 >gi|207091608|ref|ZP_03239395.1| NADH dehydrogenase subunit G [Helicobacter pylori HPKX_438_AG0C1] Length = 838 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|197334088|ref|YP_002157335.1| cytochrome c oxidase accessory protein CcoG [Vibrio fischeri MJ11] gi|197315578|gb|ACH65025.1| cytochrome c oxidase accessory protein CcoG [Vibrio fischeri MJ11] Length = 472 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 25/91 (27%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 G + C CP Y + Y D R E +G R + Sbjct: 211 AGCTYGNAGWMRSIVCLHMCP-YARFQSAMFDKDTYIVGY----DPKRGEARGPRSRKKD 265 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 PKELGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|118602835|ref|YP_904050.1| hypothetical protein Rmag_0863 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567774|gb|ABL02579.1| protein of unknown function DUF224, cysteine-rich region domain protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 518 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----------SRDEF 210 R L CV C C+ C + +SD P +R + + Sbjct: 66 RSVQVFLDSCVKCGACTDKCHYFLGSSDPKNMPVARQDLFRSVYRRHFTFAGKYFPKLVG 125 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E D++ D ++C C+ CP G++ A+ + +L Sbjct: 126 AKELDDDMLDDWYNYFHQCSQCRRCSVFCPYGIDTAEISMAAREVL 171 >gi|59713158|ref|YP_205934.1| hypothetical protein VF_2551 [Vibrio fischeri ES114] gi|59481259|gb|AAW87046.1| hypothetical protein VF_2551 [Vibrio fischeri ES114] Length = 472 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 25/91 (27%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 G + C CP Y + Y D R E +G R + Sbjct: 211 AGCTYGNAGWMRSIVCLHMCP-YARFQSAMFDKDTYIVGY----DPKRGEARGPRSRKKD 265 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 PKELGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|66524760|ref|XP_623480.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform 2 [Apis mellifera] Length = 201 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 20/123 (16%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + +I+ L + MSHF+++ +I + + H R+ G C+ C C Sbjct: 52 FLEIIRGLGITMSHFFTEPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCE 109 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ + + R+ ID +C C ++C Sbjct: 110 AICPAQAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQEAC 151 Query: 238 PKG 240 P Sbjct: 152 PVD 154 >gi|77360830|ref|YP_340405.1| iron-sulfur cluster-binding protein FixG [Pseudoalteromonas haloplanktis TAC125] gi|76875741|emb|CAI86962.1| putative iron-sulfur cluster-binding protein FixG [Pseudoalteromonas haloplanktis TAC125] Length = 451 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 G + C+ +CP + S + +++ DS R E +G R + Sbjct: 189 ALCTYGNAGFLREKMCTVACPYSRFQSVMFDKDTLVVTY-----DSARGENRGPRKRKAD 243 Query: 220 -DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 244 PKALNLGDCVDCNLCVEVCPAGIDI 268 >gi|232089|sp|P20624|FER3_RHOCA RecName: Full=Ferredoxin-3; AltName: Full=Ferredoxin III; Short=FdIII Length = 101 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 3/72 (4%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C C + G Q D DE + E + + C Sbjct: 25 KCIGCGRCFKVC---GRDVMSLHGLTEDGQVVAPGTDEWDEVEDEIVKKVMALTGAENCI 81 Query: 229 TIMNCTQSCPKG 240 C + CP Sbjct: 82 GCGACARVCPSE 93 >gi|332799548|ref|YP_004461047.1| hypothetical protein TepRe1_1601 [Tepidanaerobacter sp. Re1] gi|332697283|gb|AEE91740.1| domain of unknown function DUF1730 [Tepidanaerobacter sp. Re1] Length = 344 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 8/84 (9%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L E C C C ++CP+ + + P ++ R E Sbjct: 173 LTDIEIEPDSHIESNCNGCGSCVSACPTGALMAPFQINPYRC---LSYITQIRGHIPEEF 229 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCP 238 L D R++ C T C + CP Sbjct: 230 RKALGD--RVFGCDT---CQEVCP 248 >gi|258622981|ref|ZP_05717996.1| FixG-related protein [Vibrio mimicus VM573] gi|258584764|gb|EEW09498.1| FixG-related protein [Vibrio mimicus VM573] Length = 474 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 AVCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYNAA-------RGEQRGPRSRK 264 Query: 218 LEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKELGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|229083820|ref|ZP_04216131.1| formate dehydrogenase [Bacillus cereus Rock3-44] gi|228699477|gb|EEL52151.1| formate dehydrogenase [Bacillus cereus Rock3-44] Length = 980 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 47/173 (27%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + +DG AC K+ + L + + + + Sbjct: 47 QTCDTCIVEVDGKLMRACSTKLEDGMHIERQSMRAKEAQTEAMDRILENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWW 185 + H ++ P + + + E C+ C C C + Sbjct: 107 NGNCKVHNTVHMMGIEEQKYPYEPKVSAKEVDMTHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + ++ R + D+ + D C + C CP Sbjct: 167 NETLSIDWSLDRP--RVIWDTGVS--------INDS----SCVSCGQCVTVCP 205 >gi|153869066|ref|ZP_01998761.1| oxidoreductase, FAD-binding [Beggiatoa sp. PS] gi|152074376|gb|EDN71237.1| oxidoreductase, FAD-binding [Beggiatoa sp. PS] Length = 398 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 18/120 (15%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAIL-- 196 + +D +C C T CPSY + Sbjct: 200 QSQEIVIQPQFNWKKDLGLKAAAEKCNGSGVCRKSAGRGTMCPSYMATKEEVFSTRGRSN 259 Query: 197 -LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L + +EF E L L C + C CP ++ +A++K L Sbjct: 260 LLMQALNSPNPMEEFASEELKK-----SLDLCLSCKACKSECPANVD----MARLKSEFL 310 >gi|262166805|ref|ZP_06034542.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio mimicus VM223] gi|262026521|gb|EEY45189.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio mimicus VM223] Length = 474 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 AICTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYNAA-------RGEQRGPRSRK 264 Query: 218 LEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKELGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|206889602|ref|YP_002249567.1| reductase, iron-sulfur binding subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741540|gb|ACI20597.1| reductase, iron-sulfur binding subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 534 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 33/111 (29%), Gaps = 24/111 (21%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDR------------------YLGPAILLQAYRWL 203 L CV C C+ +C Y + + Y P+ L Sbjct: 93 PFSLSLKYCVKCNTCAEACHVYIGSGKKEIYRPNFRSEILRRIYKRYFTPSGKLLKSFVG 152 Query: 204 IDSRDEFQG-ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 D + RL L YRC C CP G++ +++ + Sbjct: 153 ADIEATYTAIRRLLELA-----YRCTLCRRCVLYCPVGIDNGLIARELRKL 198 >gi|308513276|ref|NP_951154.3| heterodisulfide reductase subunit [Geobacter sulfurreducens PCA] gi|39981965|gb|AAR33427.1| heterodisulfide reductase subunit [Geobacter sulfurreducens PCA] Length = 182 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 13/93 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C C CS CP + + R+L + + + Sbjct: 10 EALSGSSVRRCFQCGKCSAGCPMRSFME------HPPNRIVRFLQLGQ-------YERVL 56 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ C + CT CP ++ A + ++ Sbjct: 57 AGRSIWYCASCETCTTRCPNKVDLAAIMDALRK 89 >gi|312796893|ref|YP_004029815.1| NADH-quinone oxidoreductase chain I [Burkholderia rhizoxinica HKI 454] gi|312168668|emb|CBW75671.1| NADH-quinone oxidoreductase chain I (EC 1.6.5.3) [Burkholderia rhizoxinica HKI 454] Length = 162 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R I + H R+ +G C+ C C CP+ + + Sbjct: 26 YAFQRKITVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESEVR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|312196853|ref|YP_004016914.1| FAD linked oxidase domain protein [Frankia sp. EuI1c] gi|311228189|gb|ADP81044.1| FAD linked oxidase domain protein [Frankia sp. EuI1c] Length = 950 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 11/83 (13%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C + CPS+ D + + L + G R L Sbjct: 539 HRCVGVGRCRSDNTGVGGVMCPSFLATRDEKDSTRGRARVLQELANG-GLVSGYRSKEL- 596 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 L C + C CP G++ Sbjct: 597 -AESLDLCLSCRGCASDCPTGID 618 >gi|269218223|ref|ZP_06162077.1| putative oxidoreductase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212351|gb|EEZ78691.1| putative oxidoreductase [Actinomyces sp. oral taxon 848 str. F0332] Length = 1023 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 32/122 (26%), Gaps = 16/122 (13%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYWW 185 + A + + ++ C C S CPSY Sbjct: 501 DRIDEHLRRPGAKPIPYAGGFRFADDGGDMARAVHRCTGVGNCRASRFDLGAFMCPSYEA 560 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 D + + + E LD L C C++ CP G++ Sbjct: 561 TRDEKDVTRGRARVLQDVARGGVLAWDSPEVLD------SLDLCLACKACSRDCPTGIDV 614 Query: 244 AK 245 A+ Sbjct: 615 AR 616 >gi|269791702|ref|YP_003316606.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099337|gb|ACZ18324.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 449 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 41/145 (28%), Gaps = 17/145 (11%) Query: 115 PLPHMSVIKDLVVDMSHFYSQH-RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY----E 169 PL VI D M + + K + P L ++R + Sbjct: 193 PLKDFVVI-DGGPMMGRVVRRMDEPVTKTTKGLIVLPPDHPLVVAKERDMRSMMSLAKTA 251 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C+ CP Y + L AY + L C Sbjct: 252 CCHCMLCTDLCPRYLLGHRLRPDKLMRLAAYNDTCEGDAAATEAFL-----------CCE 300 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMML 254 C +C GL P K ++K + Sbjct: 301 CGMCEVACVMGLQPWKLNRELKSRM 325 >gi|109948080|ref|YP_665308.1| D-lactate dehydrogenase [Helicobacter acinonychis str. Sheeba] gi|109715301|emb|CAK00309.1| D-lactate dehydrogenase [Helicobacter acinonychis str. Sheeba] Length = 946 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 14/121 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I ++ + L C+ C C CPS D L P Sbjct: 513 KGILNPDVIITDDKEIHTKNLKSIYPIEEHLDMCMECGFCERICPS----KDLSLTPRQR 568 Query: 197 LQAYRWL-------IDSRDEFQGERLDNLEDPFRLYR--CHTIMNCTQSCPKGLNPAKAI 247 + +R + +E Q + L++ L C C+ CP G++ +I Sbjct: 569 IVIHREIERLKERANQGYNEEQALLDELLKESEYLAHTTCAVCHMCSTLCPLGID-TGSI 627 Query: 248 A 248 A Sbjct: 628 A 628 >gi|260768584|ref|ZP_05877518.1| formate hydrogenlyase complex 3 iron-sulfur protein [Vibrio furnissii CIP 102972] gi|260616614|gb|EEX41799.1| formate hydrogenlyase complex 3 iron-sulfur protein [Vibrio furnissii CIP 102972] gi|315180293|gb|ADT87207.1| hydrogenase 4 Fe-S subunit [Vibrio furnissii NCTC 11218] Length = 192 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 23/82 (28%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C+ C C+ +CP A ++++ ++ R + L Sbjct: 36 NASQCISCGACTRACP-----------------ANALIMETDEQNGTRRWEL-----SLA 73 Query: 226 RCHTIMNCTQSCPKG-LNPAKA 246 RC C + CP + +KA Sbjct: 74 RCIYCGRCEEVCPTHAIELSKA 95 >gi|237732813|ref|ZP_04563294.1| oxidoreductase [Mollicutes bacterium D7] gi|229384128|gb|EEO34219.1| oxidoreductase [Coprobacillus sp. D7] Length = 374 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 6/139 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V L ++ ++ + +M + + + + C Sbjct: 235 VASLDNVVMVLSGMSNMEQLLDNTEYMANFKPLNDKEYKL--INKAVAAINSTIKIPCTG 292 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIM 231 C+ C+ CP + ++ + + + QGE NL F C Sbjct: 293 CSYCTDGCPMNINIPKYF---SLYNADLQEVAEKGWTPQGEYYANLTKTFGKASDCIACG 349 Query: 232 NCTQSCPKGLNPAKAIAKI 250 C CP+ LN + + ++ Sbjct: 350 QCENVCPQHLNIIEGLQEV 368 >gi|298530395|ref|ZP_07017797.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfonatronospira thiodismutans ASO3-1] gi|298509769|gb|EFI33673.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfonatronospira thiodismutans ASO3-1] Length = 538 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 13/105 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + + D P + + R + G+ L + Sbjct: 83 RSFKVFMDICVRCGACADKCHFFIGSGDPKNMPVLRAELLRSVYRGEMTKAGQILGRMAG 142 Query: 221 PFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L Y+C C+ CP G++ A+ I I Sbjct: 143 GRELNEKVLKEIWYYYYQCTECRRCSVYCPYGIDQAE-ITIIGRE 186 >gi|167756352|ref|ZP_02428479.1| hypothetical protein CLORAM_01885 [Clostridium ramosum DSM 1402] gi|167703760|gb|EDS18339.1| hypothetical protein CLORAM_01885 [Clostridium ramosum DSM 1402] Length = 374 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 6/139 (4%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V L ++ ++ + +M + + + + C Sbjct: 235 VASLDNVVMVLSGMSNMEQLLDNTEYMANFKPLNDKEYKL--INKAVAAINSTIKIPCTG 292 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIM 231 C+ C+ CP + ++ + + + QGE NL F C Sbjct: 293 CSYCTDGCPMNINIPKYF---SLYNADLQEVAEKGWTPQGEYYANLTKTFGKASDCIACG 349 Query: 232 NCTQSCPKGLNPAKAIAKI 250 C CP+ LN + + ++ Sbjct: 350 QCENVCPQHLNIIEGLQEV 368 >gi|119718393|ref|YP_925358.1| FAD linked oxidase domain-containing protein [Nocardioides sp. JS614] gi|119539054|gb|ABL83671.1| FAD linked oxidase domain protein [Nocardioides sp. JS614] Length = 1000 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 11/126 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------- 178 VV + + R W A + + CV C Sbjct: 522 VVHPAPLDAHLRLGGHWEPKRLLPLAFGFPE--DGHSFAQAANRCVGVGKCRQLDHDGGT 579 Query: 179 -SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-GERLDNLEDPFRLYRCHTIMNCTQS 236 CPSY + + ++D + + + E L C C Sbjct: 580 VMCPSYQATREEQHSTRGRARLLFEMMDGHGDGTITDGWRSTEVREALDLCLACKGCKSD 639 Query: 237 CPKGLN 242 CP ++ Sbjct: 640 CPAHVD 645 >gi|331082469|ref|ZP_08331595.1| pyruvate:ferredoxin oxidoreductase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400955|gb|EGG80556.1| pyruvate:ferredoxin oxidoreductase [Lachnospiraceae bacterium 6_1_63FAA] Length = 1178 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 18/74 (24%), Gaps = 3/74 (4%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+ CP + A + + + Sbjct: 688 WQPENCIQCNRCAYVCPHAVIRPVAMTD--AEVAAAPEGMKTLPMTGMADYKFVMTV-SA 744 Query: 225 YRCHTIMNCTQSCP 238 Y C +C CP Sbjct: 745 YDCTGCGSCANVCP 758 >gi|313681402|ref|YP_004059140.1| NADH dehydrogenase subunit i [Sulfuricurvum kujiense DSM 16994] gi|313154262|gb|ADR32940.1| NADH dehydrogenase subunit I [Sulfuricurvum kujiense DSM 16994] Length = 207 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 36/149 (24%), Gaps = 31/149 (20%) Query: 103 DMKDIKGAIAVYPLPH---------MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 I YP ++ +L V + + + + Sbjct: 15 HSAYYYVDIEAYPESGWDKFKQVLKRALRGELFVGLWVVLREMIKFDIHTVQYPKEKLPI 74 Query: 154 LLQSHED----RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + R G C+ C C C S D R +SR E Sbjct: 75 GPRYRAVHKLLRLWESGYERCIGCGLCEKICISDCIRMDT-----------RIDENSRKE 123 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ L RC C + CP Sbjct: 124 VTEYSIN-------LGRCIFCGYCAEVCP 145 >gi|262172802|ref|ZP_06040480.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio mimicus MB-451] gi|261893878|gb|EEY39864.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio mimicus MB-451] Length = 474 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 AVCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYNAA-------RGEQRGPRSRK 264 Query: 218 LEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKELGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|240145957|ref|ZP_04744558.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Roseburia intestinalis L1-82] gi|257201944|gb|EEV00229.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Roseburia intestinalis L1-82] gi|291535856|emb|CBL08968.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Roseburia intestinalis M50/1] gi|291538352|emb|CBL11463.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Roseburia intestinalis XB6B4] Length = 1181 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 18/163 (11%), Positives = 39/163 (23%), Gaps = 13/163 (7%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G ++ + P V DL+ +S + ++ Sbjct: 609 AGVDAVHKVEVPASWSNPAADPAPKKLTGRPETVKMVE-DLMNPISLMDGDSLPVSAFMG 667 Query: 145 TVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + +C+ C C+ C ++ ++A Sbjct: 668 NPDGQFEHGAAAYEKRGTAVTVPTWNAEKCIQCNQCAFVCS--HATIRPFMLSEDEVKAA 725 Query: 201 RWL---IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D++ + + P C C CP G Sbjct: 726 PSNIKVADTKPKASEYKYTMSVSPL---DCMGCGECITVCPVG 765 >gi|227542301|ref|ZP_03972350.1| NADH dehydrogenase subunit I [Corynebacterium glucuronolyticum ATCC 51866] gi|227181901|gb|EEI62873.1| NADH dehydrogenase subunit I [Corynebacterium glucuronolyticum ATCC 51866] Length = 205 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + + V + + ++ K P + DGL +CV C C+ +CP+ Sbjct: 8 RGMAVTFGAMFREKSTVNYPKKPAETNPRFHGRHQL--NRWPDGLEKCVGCELCAWACPA 65 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D GER + + L RC C ++CP Sbjct: 66 DAIRVE-----------AAANTDEERYSPGERYGKVYEINYL-RCIFCGMCIEACP 109 >gi|260587961|ref|ZP_05853874.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Blautia hansenii DSM 20583] gi|260541488|gb|EEX22057.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Blautia hansenii DSM 20583] Length = 1188 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 18/74 (24%), Gaps = 3/74 (4%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+ CP + A + + + Sbjct: 698 WQPENCIQCNRCAYVCPHAVIRPVAMTD--AEVAAAPEGMKTLPMTGMADYKFVMTV-SA 754 Query: 225 YRCHTIMNCTQSCP 238 Y C +C CP Sbjct: 755 YDCTGCGSCANVCP 768 >gi|139438746|ref|ZP_01772230.1| Hypothetical protein COLAER_01233 [Collinsella aerofaciens ATCC 25986] gi|133775826|gb|EBA39646.1| Hypothetical protein COLAER_01233 [Collinsella aerofaciens ATCC 25986] Length = 1185 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 +C+ C C+ CP + + A +A R L + +G + Sbjct: 697 PHWDETKCIQCNQCAYVCPHATIRPFAMTEDEAAAAPEATRTLDAMGPKAKGMKFTMAVS 756 Query: 221 PFRLYRCHTIMNCTQSCPKG 240 P C NC + CPKG Sbjct: 757 PL---DCMGCTNCVKVCPKG 773 >gi|171463534|ref|YP_001797647.1| NADH-quinone oxidoreductase, chain I [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193072|gb|ACB44033.1| NADH-quinone oxidoreductase, chain I [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 163 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+Y + + R+ Sbjct: 38 PDEKTPLSNRFRGLHALRRYENGEERCIGCKLCEAVCPAYAITIETAERDDGTRRTSRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L +C C ++CP Sbjct: 98 ID------------------LTKCIFCGFCEEACPVD 116 >gi|72163086|ref|YP_290743.1| NADH dehydrogenase subunit I [Thermobifida fusca YX] gi|110287776|sp|Q47LF2|NUOI_THEFY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71916818|gb|AAZ56720.1| NADH-quinone oxidoreductase, chain I [Thermobifida fusca YX] Length = 183 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 14/123 (11%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++ +K V + + ++E V H+ + DGL +C+ C Sbjct: 2 LEWLNPVKGFGVTFHTMFKKVPTVEY--PEVKAPTMPRFHGRHQLNRWPDGLEKCIGCEL 59 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ +CP+ Y+ + R+ GER + L RC C + Sbjct: 60 CAWACPA----DAIYVEAGDNTEEERYSP-------GERYGRVYQINYL-RCILCGLCVE 107 Query: 236 SCP 238 +CP Sbjct: 108 ACP 110 >gi|327403952|ref|YP_004344790.1| NADH dehydrogenase subunit I [Fluviicola taffensis DSM 16823] gi|327319460|gb|AEA43952.1| NADH dehydrogenase subunit I [Fluviicola taffensis DSM 16823] Length = 179 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 14/128 (10%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 ++ + + + H + +H +++ V + A H ++ +G C C C+ +C Sbjct: 27 ILGGMWITLKHVFKKHNTVKY--PEVKREFAPVYRGQHVLKRDEEGRENCTACGLCAVAC 84 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ YR E+ + L RC C ++CPK Sbjct: 85 PAEAITMTSEERKKGEEHLYR----------EEKYATTYEINML-RCIFCGLCEEACPKE 133 Query: 241 -LNPAKAI 247 + I Sbjct: 134 AIFLTDRI 141 >gi|322378675|ref|ZP_08053108.1| NADH-quinone oxidoreductase subunit I (NuoI) [Helicobacter suis HS1] gi|322379666|ref|ZP_08053984.1| NADH dehydrogenase subunit I [Helicobacter suis HS5] gi|321147902|gb|EFX42484.1| NADH dehydrogenase subunit I [Helicobacter suis HS5] gi|321148892|gb|EFX43359.1| NADH-quinone oxidoreductase subunit I (NuoI) [Helicobacter suis HS1] Length = 218 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 37/121 (30%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S+ +I + V P + H R G C+ C C Sbjct: 33 GLDLFKGLGLTIKEFFSKDVTIH-YPMEVLPLSPRYRAVHHLQRLLDSGNERCIGCGLCE 91 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + ER L RC C + C Sbjct: 92 KICTSNCI---------------RIITH---KAPDERKYIDSYTINLGRCIYCGLCAEVC 133 Query: 238 P 238 P Sbjct: 134 P 134 >gi|258626105|ref|ZP_05720956.1| FixG-related protein [Vibrio mimicus VM603] gi|258581631|gb|EEW06529.1| FixG-related protein [Vibrio mimicus VM603] Length = 474 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 AVCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYNAA-------RGEQRGPRSRK 264 Query: 218 LEDPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKELGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|225175193|ref|ZP_03729189.1| electron transport complex, RnfABCDGE type, C subunit [Dethiobacter alkaliphilus AHT 1] gi|225169369|gb|EEG78167.1| electron transport complex, RnfABCDGE type, C subunit [Dethiobacter alkaliphilus AHT 1] Length = 440 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 43/165 (26%), Gaps = 20/165 (12%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G N + + ++ +S + Sbjct: 294 GINEPKNMLVRVGTPMEEVIEQCGGFKPNIRKMILGGPMMGLAQSGPENQPVIKGTSGIL 353 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L E +D + C+ CA C CP ++G ++ Y + E Sbjct: 354 CLTDAE--VTLDEIRPCIKCAKCVEVCPVSIMPL--FIGGSVEHGMY---------DKAE 400 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + ++ C CT CP + I K + ++ Sbjct: 401 AFNAMD-------CIECGCCTYICPAKRPLVQWIRMAKGDIAAKR 438 >gi|172037138|ref|YP_001803639.1| NADH dehydrogenase subunit I [Cyanothece sp. ATCC 51142] gi|254767211|sp|B1WPK3|NDHI_CYAA5 RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|171698592|gb|ACB51573.1| NADH dehydrogenase subunit I [Cyanothece sp. ATCC 51142] Length = 196 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 24/123 (19%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 + + L V H + +++ + + P E +C+ C Sbjct: 17 EAAKYIGQGLSVTFDHMRRRPVTVQYPYEKLIPSERYRGRIHFE-------FDKCIACEV 69 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP D + + D + + L + F + C NC + Sbjct: 70 CVRVCPINLPVVD-----------WEFNKD----AKKKELKHYSIDFGV--CIFCGNCVE 112 Query: 236 SCP 238 CP Sbjct: 113 YCP 115 >gi|148257591|ref|YP_001242176.1| putative formate dehydrogenase subunit alpha [Bradyrhizobium sp. BTAi1] gi|146409764|gb|ABQ38270.1| NAD-dependent formate dehydrogenase iron-sulfur protein / NAD-dependent formate dehydrogenase catalytic subunit [Bradyrhizobium sp. BTAi1] Length = 909 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 23/92 (25%), Gaps = 14/92 (15%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + L C+ C C T+C N +G A + D+ Sbjct: 127 HRPTIERVTQQHPAITVDLDACIRCGLCRTACQDVQVNG--VIGVAGRGAEACIVFDANV 184 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 C C Q CP G Sbjct: 185 PLTDS------------SCVACGECVQVCPTG 204 >gi|86149249|ref|ZP_01067480.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596063|ref|ZP_01099300.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218563062|ref|YP_002344841.1| hypothetical protein Cj1459 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840031|gb|EAQ57289.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190904|gb|EAQ94876.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360768|emb|CAL35567.1| hypothetical protein Cj1459 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926667|gb|ADC29019.1| hypothetical protein CJSA_1383 [Campylobacter jejuni subsp. jejuni IA3902] gi|315927405|gb|EFV06743.1| hypothetical protein CSQ_1098 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928996|gb|EFV08239.1| hypothetical protein CSS_1774 [Campylobacter jejuni subsp. jejuni 305] Length = 357 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 10/167 (5%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y D D LL ++N + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQN---DDIYFDFDKDEDT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ K K+ + + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEKIAKEFDFNLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 K + + + +D L E + + ++ Sbjct: 115 GDEEDKKLYAKYDYLYYATEILDYLPEYMGDGVFYLASKMIEKYPEK 161 >gi|325003716|ref|ZP_08124828.1| NADH dehydrogenase subunit I [Pseudonocardia sp. P1] Length = 179 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 14/120 (11%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 K V S + + + P A H+ + DGL +CV C C+ Sbjct: 2 FDFFKGFGVTFSTMFK--KVVTEEYPEDFPPAAPRYHGRHQLNRHPDGLEKCVGCELCAW 59 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y+ + R+ GER + L RC C ++CP Sbjct: 60 ACPA----DAIYVEGGDNTEEARYSP-------GERYGAIYQINYL-RCIGCGLCIEACP 107 >gi|254787398|ref|YP_003074827.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Teredinibacter turnerae T7901] gi|237686318|gb|ACR13582.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Teredinibacter turnerae T7901] Length = 1195 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 10/103 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + ++ I C+ C CS CP + ++ + L+ A DS Sbjct: 675 PTGTTQWEKRNIAMDIPIWDSELCIQCGNCSIVCP-HATIRAKFYRESALVNA----PDS 729 Query: 207 --RDEFQGERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAK 245 + +L ++Y C C ++CP +P Sbjct: 730 FRSADVTARGFPDLRYTLQVYPEDCTGCGLCVRACPVN-DPQD 771 >gi|315929518|gb|EFV08711.1| 2Fe-2S iron-sulfur cluster binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 268 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 59/250 (23%), Gaps = 68/250 (27%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDIK 108 +D + + + P + C C C + DG +C K+ Sbjct: 8 IDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLACRMCMVEADGKKVYSCNTKAKE-- 65 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI-------------------EPWLKTVSPK 149 M V DL ++ + + Sbjct: 66 ---------GMIVESDLQNLWDERNDIMQTYCINHPLECGVCDKSGECELQNFTHKSRVN 116 Query: 150 PAKELLQSHEDRQKIDGL-----YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 K ++ K G+ C++C C T C S P Sbjct: 117 VQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESALKTVPRGG-------- 168 Query: 205 DSRDEFQGERLDNLEDPFRLY----------------RCHTIMNCTQSCPKG------LN 242 DS D E + D + ++ C CT CP G Sbjct: 169 DSVDNSFKESMGK--DAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTGALIGSKFQ 226 Query: 243 PAKAIAKIKM 252 I ++K Sbjct: 227 YTSNIWELKR 236 >gi|229068276|ref|ZP_04201579.1| formate dehydrogenase [Bacillus cereus F65185] gi|228714737|gb|EEL66609.1| formate dehydrogenase [Bacillus cereus F65185] Length = 978 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|227499410|ref|ZP_03929521.1| pyruvate synthase [Anaerococcus tetradius ATCC 35098] gi|227218472|gb|EEI83715.1| pyruvate synthase [Anaerococcus tetradius ATCC 35098] Length = 1178 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 11/81 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP + P +L + + + E + LE Sbjct: 684 PEWKIDNCIQCNQCSFVCP------HATIRPFLLDEKAKANAPTGFETKKAIGRGLEGYE 737 Query: 223 -----RLYRCHTIMNCTQSCP 238 Y C NC CP Sbjct: 738 FRIQVSPYDCMGCGNCVDVCP 758 >gi|224368511|ref|YP_002602674.1| iron-sulfur cluster-binding protein (ferredoxin family protein) [Desulfobacterium autotrophicum HRM2] gi|223691227|gb|ACN14510.1| iron-sulfur cluster-binding protein (ferredoxin family protein) [Desulfobacterium autotrophicum HRM2] Length = 478 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 23/93 (24%) Query: 170 CVMCACCSTSCPSY-----WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C CP Y Y GP + L + + L Sbjct: 311 CIRCGACLNVCPVYGKIGGHSYGSAYTGPVGAVV-------------TPLLGGINEASHL 357 Query: 225 YRC---HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP LN + + ++ L Sbjct: 358 --CQGESLCGACRVACPLNLNLPRMLLALRAKL 388 >gi|253700864|ref|YP_003022053.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251775714|gb|ACT18295.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 325 Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 26/148 (17%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS- 182 DL+V+ ++ + P + + P L+ + CV C CS CP+ Sbjct: 175 DLLVETAN-----ETGPPPCGSCNVLPQDPQLRFSDHPLWEKFAETCVSCGACSVCCPTC 229 Query: 183 YWWNSDRYLGPAILLQAYR------WLIDSRDEF---QGERLDNLEDPF----------- 222 Y ++ Y + + R ++ + RL+ L F Sbjct: 230 YCFDLREYPSLSGGGERVREWDNCLFVTHGEVAGGNFRATRLERLRYRFLHKYCGFTPLT 289 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C + CP ++ + + Sbjct: 290 GMTSCVGCGRCKEFCPVDIDLRELFQDL 317 >gi|229077902|ref|ZP_04210513.1| formate dehydrogenase [Bacillus cereus Rock4-2] gi|228705420|gb|EEL57795.1| formate dehydrogenase [Bacillus cereus Rock4-2] Length = 978 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|228951082|ref|ZP_04113200.1| formate dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808599|gb|EEM55100.1| formate dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 978 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|256821523|ref|YP_003145486.1| NADH dehydrogenase subunit I [Kangiella koreensis DSM 16069] gi|256795062|gb|ACV25718.1| NADH-quinone oxidoreductase, chain I [Kangiella koreensis DSM 16069] Length = 163 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + L + +H + + +++ + H R+ +G C+ C C Sbjct: 15 ELFRGLRLTWAHMWKRKVTVQY--PEEQTPQSPRFRGIHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + GP +S + R + ++C C +SCP Sbjct: 73 CPAAAITIEA--GPR----------ESDGTRRTTRYEIDM-----FKCIYCGFCEESCPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|182419698|ref|ZP_02950939.1| Fe-S oxidoreductase [Clostridium butyricum 5521] gi|237665893|ref|ZP_04525881.1| aldo/keto reductase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376435|gb|EDT74016.1| Fe-S oxidoreductase [Clostridium butyricum 5521] gi|237658840|gb|EEP56392.1| aldo/keto reductase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 372 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 6/136 (4%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++ V+ + +M + + + + + + C C+ Sbjct: 236 LDNVKVVLSGMSNMEQLLDNTKYMRDFKPLDEEEYKL--IDKAVNVINSTITIPCTGCSY 293 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCT 234 C CP + ++ + + + QGE +NL F C C Sbjct: 294 CVDGCPMKIAIPKYF---SLYNADLQEVKEKGWTPQGEYYNNLTKTFGKASDCIQCGQCE 350 Query: 235 QSCPKGLNPAKAIAKI 250 CP+ L K + + Sbjct: 351 GVCPQHLPIIKDLENV 366 >gi|119897636|ref|YP_932849.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Azoarcus sp. BH72] gi|119670049|emb|CAL93962.1| putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Azoarcus sp. BH72] Length = 474 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 11/87 (12%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNL 218 + +Y+ P Q+ + D+ R E +G R + Sbjct: 198 FWILFYAGFTYLFAGVMREQVCKYMCPYARFQSVMFDADTLVITYDEERGEPRGTRKKGV 257 Query: 219 EDPFRLY--RCHTIMNCTQSCPKGLNP 243 DP + C C Q CP G++ Sbjct: 258 -DPKSVGKGDCIDCGICVQVCPTGIDI 283 >gi|152983886|ref|YP_001349135.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas aeruginosa PA7] gi|150959044|gb|ABR81069.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas aeruginosa PA7] Length = 471 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R +L+ L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEKRGPRKKSLDYKAQGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|320120395|gb|EFE28131.2| glutamate synthase (NADPH), homotetrameric [Filifactor alocis ATCC 35896] Length = 465 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIK 251 RC N C Q+CP G+N IAK+K Sbjct: 40 RCLNCKNPRCVQACPVGVNIPSFIAKVK 67 >gi|313156890|gb|EFR56328.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 146 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 13/72 (18%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C ++CP+ + D E R + + L C Sbjct: 63 KCIACGLCQSACPNGTIRITT-----------EMVADP--ETGKSRKRLVLYEYDLGACM 109 Query: 229 TIMNCTQSCPKG 240 C +CP G Sbjct: 110 FCRLCVNACPTG 121 >gi|198284338|ref|YP_002220659.1| NADH dehydrogenase subunit I [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668010|ref|YP_002427000.1| NADH-quinone oxidoreductase, I subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248859|gb|ACH84452.1| NADH-quinone oxidoreductase, chain I [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520223|gb|ACK80809.1| NADH-quinone oxidoreductase, I subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 163 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ + + +F+++ +++ + H R+ +G C+ C C Sbjct: 16 EMLRGMQLTGRYFFARKITVQY--PEEQTPQSPRFRGLHALRRYANGEERCIACKLCEAV 73 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + + R+ ID L +C C +SCP Sbjct: 74 CPALAITIESDVRSDGTRRTTRYDID------------------LSKCIFCGLCEESCPV 115 Query: 240 G 240 Sbjct: 116 D 116 >gi|167586514|ref|ZP_02378902.1| formate dehydrogenase, alpha subunit [Burkholderia ubonensis Bu] Length = 983 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 14/92 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +C++C C +C + G L A R +S Sbjct: 172 DGANHLRDRKDESNPYFTYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFES 223 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R + D C + C +CP Sbjct: 224 RVAAGES--EAFMDSE----CVSCGACVAACP 249 >gi|288931116|ref|YP_003435176.1| CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit [Ferroglobus placidus DSM 10642] gi|288893364|gb|ADC64901.1| CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit [Ferroglobus placidus DSM 10642] Length = 804 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 18/103 (17%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 ++ D + + + +C C C +CP L+ + + Sbjct: 383 KKHGGNRKYRFFANDEELWNEINKCTQCMNCVFTCP-------------HNLRIDQGMAH 429 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIA 248 ++ +L LE+ C C Q+CPK + I Sbjct: 430 AQKTKDLSKLAKLEEQ-----CIACGKCEQACPKNIKIINVIM 467 >gi|145589226|ref|YP_001155823.1| NADH dehydrogenase subunit I [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047632|gb|ABP34259.1| NADH dehydrogenase subunit I [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 163 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+Y + + R+ Sbjct: 38 PEEKTPLSNRFRGLHALRRYENGEERCIGCKLCEAVCPAYAITIETAERDDGTRRTSRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L +C C ++CP Sbjct: 98 ID------------------LTKCIFCGFCEEACPVD 116 >gi|82702228|ref|YP_411794.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] gi|115502511|sp|Q2YA19|NUOI2_NITMU RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|82410293|gb|ABB74402.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] Length = 162 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 +IK +++ + ++ R I + + H R+ +G C+ C C Sbjct: 14 FELIKGMMLTGRNMFA--RKITVYFPEEKTPQSPRFRGLHALRRYPNGEERCIACKLCEA 71 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID L +C C +SCP Sbjct: 72 VCPALAITIESEQREDGTRRTTRYDID------------------LTKCIFCGFCEESCP 113 Query: 239 KG 240 Sbjct: 114 VD 115 >gi|301063579|ref|ZP_07204096.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300442311|gb|EFK06559.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 429 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 31/106 (29%), Gaps = 17/106 (16%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 ++ DR ++G C+ C C +CP + R L +S+ Sbjct: 329 PDTDAIMVQGRDRIVLNGNDPCINCGECIRACPV----------RIPVNMLVRLLENSQY 378 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E D L C C+ C + I K L Sbjct: 379 ENAAREYDLL-------SCIECGLCSYVCEAKIPVFHYIMLGKYEL 417 >gi|228906337|ref|ZP_04070221.1| formate dehydrogenase [Bacillus thuringiensis IBL 200] gi|228853249|gb|EEM98022.1| formate dehydrogenase [Bacillus thuringiensis IBL 200] Length = 978 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|224369674|ref|YP_002603838.1| TmcB1 [Desulfobacterium autotrophicum HRM2] gi|223692391|gb|ACN15674.1| TmcB1 [Desulfobacterium autotrophicum HRM2] Length = 444 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 3/119 (2%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPA 194 +E + E++ + + + CV C CS C + D PA Sbjct: 18 MAGVEKLSPEKIERVINEVITAETGAKLKVYVDTCVHCGLCSEGCHYFISRDRDPKFSPA 77 Query: 195 ILLQAYRW-LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 ++ W ++ R E + N C+ C CP G++ A ++ ++ Sbjct: 78 GKVKQTLWEIMRKRGRVSPEFIKNAAVVAYTQ-CNLCKRCAMYCPFGIDIAYVMSVMRR 135 >gi|328947363|ref|YP_004364700.1| electron transport complex, RnfABCDGE type, C subunit [Treponema succinifaciens DSM 2489] gi|328447687|gb|AEB13403.1| electron transport complex, RnfABCDGE type, C subunit [Treponema succinifaciens DSM 2489] Length = 449 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 19/101 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +D + +C+ C C + C + L P ++++ E + E + N Sbjct: 357 KDETYLVDEEQCIGCGMCVSVCAMH-------LSPVLMVR----------ELKAENISNA 399 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + L C C +CP + + +I ++ +I Sbjct: 400 K-KLGLMDCIECGCCAYACPANVRLVQR-FRIGKSIVREQI 438 >gi|229108197|ref|ZP_04237819.1| formate dehydrogenase [Bacillus cereus Rock1-15] gi|229143315|ref|ZP_04271746.1| formate dehydrogenase [Bacillus cereus BDRD-ST24] gi|228640122|gb|EEK96521.1| formate dehydrogenase [Bacillus cereus BDRD-ST24] gi|228675213|gb|EEL30435.1| formate dehydrogenase [Bacillus cereus Rock1-15] Length = 978 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|255284234|ref|ZP_05348789.1| oxidoreductase, aldo/keto reductase family [Bryantella formatexigens DSM 14469] gi|255265187|gb|EET58392.1| oxidoreductase, aldo/keto reductase family [Bryantella formatexigens DSM 14469] Length = 376 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 7/124 (5%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + D S +++ + + R C C C CP Sbjct: 253 MSDQSQMEDNLQTMNDFEPLSDVEKEAVQETVKVIRSVPTIS--CTACRYCVEGCPQQIK 310 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 D + L R S ++ + + D C C CP+ L + Sbjct: 311 IPDIF----KCLNQVRLYGKS-EKASANYKNAVGDGGAASVCVHCGQCEGVCPQHLPVTE 365 Query: 246 AIAK 249 + + Sbjct: 366 YLEE 369 >gi|317484144|ref|ZP_07943074.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924648|gb|EFV45804.1| cysteine-rich domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 375 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 22/94 (23%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE----------FQGERLDNLE 219 C C C CP + P R L++ D RL L Sbjct: 5 CTQCGDCLDVCPIFALYRREEYSPKGK----RLLMEPLDGWGAGETPLPWKTIRRLSRL- 59 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 C C + C + L+ ++ +A ++ Sbjct: 60 -------CAGCGRCARRCARKLSTSELLADLRSQ 86 >gi|261350579|ref|ZP_05975996.1| oxidoreductase [Methanobrevibacter smithii DSM 2374] gi|288861362|gb|EFC93660.1| oxidoreductase [Methanobrevibacter smithii DSM 2374] Length = 404 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 13/162 (8%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + P ++ + + +++ E + Sbjct: 224 ADPSKTNAEWSISWILNHPEITCVFSGMNNIAQIDENIAIGNSVEPHSMSLEELETIDYA 283 Query: 159 EDRQKIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + K C C C CP +++YL L S ++ Sbjct: 284 KRALKELLKINCTSCGYCLP-CPRGVNIPECMKIYNEKYLF-----NQKGLLNQSLIDYY 337 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + D C+ C + CP+ L+ K + K+K Sbjct: 338 LTVSGIMIDSSNAGLCNGCGKCLRKCPQHLDIPKELDKVKKE 379 >gi|261839942|gb|ACX99707.1| D-lactate dehydrogenase [Helicobacter pylori 52] Length = 946 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPKGLLNPDVIITNDKEIHTKNLKSIHSIEEYLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREVERLKKRVSHGHHEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSTLCPLGIDTGKI 627 >gi|257440402|ref|ZP_05616157.1| electron transport complex, RnfABCDGE type, C subunit [Faecalibacterium prausnitzii A2-165] gi|257197151|gb|EEU95435.1| electron transport complex, RnfABCDGE type, C subunit [Faecalibacterium prausnitzii A2-165] Length = 455 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 23/86 (26%), Gaps = 18/86 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + C+ C C CP L P + QAY R Sbjct: 364 IMLSAAAAEPPQVNPCIRCGRCVEYCPM-------GLEPVEVNQAY-----------AAR 405 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG 240 + C +CT CP Sbjct: 406 DVQELGKLHVDYCFNCGSCTFVCPAK 431 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP GL P ++ R + Sbjct: 379 CIRCGRCVEYCPMGLEPV----EVNQAYAARDV 407 >gi|228957009|ref|ZP_04118784.1| formate dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802640|gb|EEM49482.1| formate dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 978 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|229042448|ref|ZP_04190194.1| formate dehydrogenase [Bacillus cereus AH676] gi|228726902|gb|EEL78113.1| formate dehydrogenase [Bacillus cereus AH676] Length = 978 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|193212602|ref|YP_001998555.1| hydrogenase/sulfur reductase subunit beta [Chlorobaculum parvum NCIB 8327] gi|193086079|gb|ACF11355.1| hydrogenase/sulfur reductase, beta subunit [Chlorobaculum parvum NCIB 8327] Length = 337 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 21/117 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQA----YRWLID 205 ++ E + D C+ C C+ CP+ D Y G + + Sbjct: 216 KENFESQFWKDISMRCIGCGSCTFLCPTCHCFDIQDEGDTYQGIRRKNWDSCSFALFTMH 275 Query: 206 -----SRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ + F + C CT+ CP + + + I Sbjct: 276 TSGHNPRNAQSTRWRQRIMHKFNYYRGKFGVNSCSGCGRCTRQCPVDMGITETLQAI 332 >gi|315917365|ref|ZP_07913605.1| glutamate synthase [Fusobacterium gonidiaformans ATCC 25563] gi|317058541|ref|ZP_07923026.1| glutamate synthase [Fusobacterium sp. 3_1_5R] gi|313684217|gb|EFS21052.1| glutamate synthase [Fusobacterium sp. 3_1_5R] gi|313691240|gb|EFS28075.1| glutamate synthase [Fusobacterium gonidiaformans ATCC 25563] Length = 758 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 12/89 (13%) Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIM 231 + SCP++ ++ + + R++ E L+ + RC Sbjct: 287 NPSCPNHEVV---FVDRKKRIPVREQKPEERNQNFEEVCYGYSLEEAKLEAS--RCLQCK 341 Query: 232 N--CTQSCPKGLNPAKAIAKIKMMLLDRK 258 N C Q+CP ++ I +IK L Sbjct: 342 NPLCVQACPVSIDIPTFIREIKEDNLQAA 370 >gi|311067708|ref|YP_003972631.1| iron-sulfur binding domain-containing protein [Bacillus atrophaeus 1942] gi|310868225|gb|ADP31700.1| iron-sulfur binding domain-containing protein [Bacillus atrophaeus 1942] Length = 984 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 58/205 (28%), Gaps = 30/205 (14%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVKDMKDIK 108 V+++ G + LL + P + S C +C ++++G +C ++KD Sbjct: 11 VEMETAGEQNVLNLLSDSSIEVPHVCYHPSLGPIETCDTCIVSVNGELVRSCSAELKDGD 70 Query: 109 GAIAV-------------YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 + L + + + + H +++ P + Sbjct: 71 VIDTLSSEVKKAQVIGMDNILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDQKP 130 Query: 156 QSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 ++ +C++C C +C + W D Sbjct: 131 YHKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES-- 188 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C+ CP Sbjct: 189 ------------SCVSCGHCSTVCP 201 >gi|294792883|ref|ZP_06758030.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella sp. 6_1_27] gi|294456782|gb|EFG25145.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella sp. 6_1_27] Length = 1178 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|294794642|ref|ZP_06759778.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella sp. 3_1_44] gi|294454972|gb|EFG23345.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella sp. 3_1_44] Length = 1178 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|291520394|emb|CBK75615.1| Predicted oxidoreductases of the aldo/keto reductase family [Butyrivibrio fibrisolvens 16/4] Length = 233 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 37/137 (27%), Gaps = 12/137 (8%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 V LP + ++ + M ++ + + A D + +C Sbjct: 94 VASLPQVKIVLSGMGTMDMMQDNVSYMKDFKPLTDEERAIVFKAR--DIINSNIAIQCTA 151 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYR---WLIDSRDEFQGERLDNLEDPFR-LYRCH 228 CA C CP + Y+ W E D L F C Sbjct: 152 CAYCVDGCPKNIPIPRYFSLYNSEQLEYKGKGWSNHG------EYYDRLTQAFGKASDCI 205 Query: 229 TIMNCTQSCPKGLNPAK 245 C + CP+ L Sbjct: 206 KCGKCEKICPQHLPIRD 222 >gi|282849962|ref|ZP_06259345.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella parvula ATCC 17745] gi|282580399|gb|EFB85799.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Veillonella parvula ATCC 17745] Length = 1178 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|238018724|ref|ZP_04599150.1| hypothetical protein VEIDISOL_00568 [Veillonella dispar ATCC 17748] gi|237865195|gb|EEP66485.1| hypothetical protein VEIDISOL_00568 [Veillonella dispar ATCC 17748] Length = 1178 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|269798448|ref|YP_003312348.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Veillonella parvula DSM 2008] gi|269095077|gb|ACZ25068.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Veillonella parvula DSM 2008] Length = 1178 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 5/85 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP L + A D+ + L Sbjct: 687 PKWLPENCIQCNQCSFVCP--HATIRPILATEAEVAAAPEHFDTIPALGAKDLQFRIAVS 744 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAI 247 L C NC CP KAI Sbjct: 745 PL-DCLGCGNCVDICPA--PKGKAI 766 >gi|149925367|ref|ZP_01913631.1| Formate dehydrogenase, alpha subunit [Limnobacter sp. MED105] gi|149825484|gb|EDM84692.1| Formate dehydrogenase, alpha subunit [Limnobacter sp. MED105] Length = 912 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 15/81 (18%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 + C+ C C +C N +G A + + D D Sbjct: 146 NMDHCIQCTRCVRACREVQVND--VIGLAFRGEHAAIVFDQGDALAQS------------ 191 Query: 226 RCHTIMNCTQSCPKG-LNPAK 245 C C Q+CP G L+PAK Sbjct: 192 TCVACGECVQACPTGALSPAK 212 >gi|144900794|emb|CAM77658.1| NADH-quinone oxidoreductase, chain I [Magnetospirillum gryphiswaldense MSR-1] Length = 162 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + H R+ +G C+ C C CP+ + P +A R+ +D Sbjct: 42 PMSPRFRGEHALRRYANGEERCIACKLCEAICPAQAITIEAEPRPDGSRRARRYDLDMT- 100 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +C C ++CP Sbjct: 101 -----------------KCIYCGLCQEACPVD 115 >gi|315186240|gb|EFU20001.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Spirochaeta thermophila DSM 6578] Length = 440 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 18/85 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R G C+ C+ C+ CP R L P WL+ ERL Sbjct: 358 RGATGGEEPCIHCSRCAQVCP-------RGLEP--------WLLHEALGRGDERL---LS 399 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAK 245 + C C+ CP + A Sbjct: 400 GGAIEGCIGCNLCSFVCPSAIPLAD 424 >gi|307244617|ref|ZP_07526721.1| sulfite reductase, subunit A [Peptostreptococcus stomatis DSM 17678] gi|306491998|gb|EFM64047.1| sulfite reductase, subunit A [Peptostreptococcus stomatis DSM 17678] Length = 336 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 51/146 (34%), Gaps = 24/146 (16%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 ++ L V+ + + + + C+ C C+ +CP+ S + + Sbjct: 189 YVKENLFKVNVPDKVDFNHMKDHKMWDEYDARCIACGRCNFTCPTCTCYSMQDIFYRENE 248 Query: 198 QA--------------YRWLIDSRD--EFQGERL--------DNLEDPFRLYRCHTIMNC 233 Y + E G+R+ + ++ F C C Sbjct: 249 NVGERRRVWASCQVDGYTSIAGGHAFREKHGQRMRFKSMHKIHDFKERFGYNMCVGCGRC 308 Query: 234 TQSCPKGLNPAKAIAKIKMMLLDRKI 259 +CP+ ++ ++AI K+ ++++ + Sbjct: 309 DDACPQYISFSEAIDKVSKAMIEKDL 334 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 39/145 (26%), Gaps = 9/145 (6%) Query: 47 TYYVDLDNCGPMVLDGLLYI--KNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDM 104 + VD ++ + + D + R CG C + Sbjct: 184 DFEVDYVKENLFKVNVPDKVDFNHMKDHKMWDEYDARCIACGRCNFTCPTCTCYSMQDIF 243 Query: 105 KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI 164 + V VD Y+ + + + + + D ++ Sbjct: 244 YRENENVGER----RRVWASCQVDG---YTSIAGGHAFREKHGQRMRFKSMHKIHDFKER 296 Query: 165 DGLYECVMCACCSTSCPSYWWNSDR 189 G CV C C +CP Y S+ Sbjct: 297 FGYNMCVGCGRCDDACPQYISFSEA 321 >gi|303327295|ref|ZP_07357737.1| reductase, iron-sulfur binding subunit [Desulfovibrio sp. 3_1_syn3] gi|302863283|gb|EFL86215.1| reductase, iron-sulfur binding subunit [Desulfovibrio sp. 3_1_syn3] Length = 531 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 20/129 (15%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAI 195 + ++ K S + L E + CV C CS +C + + + P Sbjct: 75 KFLDGMRKLFSKENNWTFLPMLE-----TSMDNCVQCNSCSAACHLFEMSGENEMYRPNF 129 Query: 196 LLQAYRWLID---SRDEFQGERLDNLEDPFR--------LYRCHTIMNCTQSCPKGLN-- 242 + +R + ++ F R ++ ++ YRC+ C Q+CP G++ Sbjct: 130 RSEIFRRIYKQYVKKEPFAKWRYGDINLNWKTVARLGELAYRCNLCRRCAQTCPIGVDNG 189 Query: 243 -PAKAIAKI 250 A+ I K+ Sbjct: 190 LIAREIRKL 198 >gi|228963683|ref|ZP_04124826.1| formate dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795987|gb|EEM43452.1| formate dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] Length = 974 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|218895646|ref|YP_002444057.1| molybdopterin oxidoreductase family protein [Bacillus cereus G9842] gi|228899276|ref|ZP_04063539.1| formate dehydrogenase [Bacillus thuringiensis IBL 4222] gi|218543549|gb|ACK95943.1| molybdopterin oxidoreductase family protein [Bacillus cereus G9842] gi|228860307|gb|EEN04704.1| formate dehydrogenase [Bacillus thuringiensis IBL 4222] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|218235223|ref|YP_002365387.1| molybdopterin oxidoreductase family protein [Bacillus cereus B4264] gi|218163180|gb|ACK63172.1| molybdopterin oxidoreductase family protein [Bacillus cereus B4264] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|83588937|ref|YP_428946.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Moorella thermoacetica ATCC 39073] gi|83571851|gb|ABC18403.1| Pyruvate:ferredoxin (flavodoxin) oxidoreductase [Moorella thermoacetica ATCC 39073] Length = 1171 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 23/83 (27%), Gaps = 9/83 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP YL L ++D E F Sbjct: 679 PQWQPENCIQCNQCSLVCP--HAAIRPYLAKPADLAGAPETFVTKDAIGKE---AAGLKF 733 Query: 223 RLY----RCHTIMNCTQSCPKGL 241 R+ C NC CP + Sbjct: 734 RIQVSPLDCTGCGNCADVCPAKV 756 >gi|283832577|ref|ZP_06352318.1| PduS protein [Citrobacter youngae ATCC 29220] gi|291072246|gb|EFE10355.1| PduS protein [Citrobacter youngae ATCC 29220] Length = 451 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C C C+ CP + + L P +L++A + + Sbjct: 247 QRRMQDERTVLSVAKTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY----QQAATP 300 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 + L C C CP G++P + +K L Sbjct: 301 QLLLTALT------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|229148929|ref|ZP_04277174.1| formate dehydrogenase [Bacillus cereus m1550] gi|228634469|gb|EEK91053.1| formate dehydrogenase [Bacillus cereus m1550] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|237732052|ref|ZP_04562533.1| propanediol utilization protein [Citrobacter sp. 30_2] gi|226907591|gb|EEH93509.1| propanediol utilization protein [Citrobacter sp. 30_2] Length = 451 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C C C+ CP + + L P +L++A + + Sbjct: 247 QRRMQDERTVLSVAKTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY----QQAATP 300 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 + L C C CP G++P + +K L Sbjct: 301 QLLLTALT------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|171854200|emb|CAM57298.1| cobalamin reductase [Citrobacter freundii] Length = 451 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C C C+ CP + + L P +L++A + + Sbjct: 247 QRRMQDERTVLSVAKTVCEQCRLCTDLCPRHLIGHE--LSPHLLVRAVNY----QQAATP 300 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 + L C C CP G++P + +K L Sbjct: 301 QLLLTALT------CSECNVCESVACPVGISPMRINRMLKREL 337 >gi|218782183|ref|YP_002433501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763567|gb|ACL06033.1| Electron transport complex protein, RnfC [Desulfatibacillum alkenivorans AK-01] Length = 422 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 26/87 (29%), Gaps = 17/87 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP+ + R+L + E+ D L C Sbjct: 345 ASCINCGECIKVCPA----------KVPVNMMVRFLENQLYVDAAEKYDLL-------SC 387 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C+ CP + + I K L Sbjct: 388 VDCGFCSFVCPARIPIYQYIGLAKFEL 414 >gi|294678791|ref|YP_003579406.1| ferredoxin III [Rhodobacter capsulatus SB 1003] gi|516637|gb|AAA26146.1| ORF5 [Rhodobacter capsulatus] gi|294477611|gb|ADE86999.1| ferredoxin III [Rhodobacter capsulatus SB 1003] Length = 102 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 3/72 (4%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C C + G Q D DE + E + + C Sbjct: 26 KCIGCGRCFKVC---GRDVMSLHGLTEDGQVVAPGTDEWDEVEDEIVKKVMALTGAENCI 82 Query: 229 TIMNCTQSCPKG 240 C + CP Sbjct: 83 GCGACARVCPSE 94 >gi|30018775|ref|NP_830406.1| formate dehydrogenase alpha chain [Bacillus cereus ATCC 14579] gi|229126022|ref|ZP_04255045.1| formate dehydrogenase [Bacillus cereus BDRD-Cer4] gi|29894316|gb|AAP07607.1| Formate dehydrogenase alpha chain [Bacillus cereus ATCC 14579] gi|228657447|gb|EEL13262.1| formate dehydrogenase [Bacillus cereus BDRD-Cer4] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 51/216 (23%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ C + C CP Sbjct: 182 IWDNGVSINES------------SCVSCGQCVTVCP 205 >gi|119385581|ref|YP_916636.1| formate dehydrogenase, alpha subunit [Paracoccus denitrificans PD1222] gi|119376176|gb|ABL70940.1| formate dehydrogenase alpha subunit [Paracoccus denitrificans PD1222] Length = 959 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 31/118 (26%), Gaps = 15/118 (12%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSC 180 +D+ + ++ + + + + +C++C+ C +C Sbjct: 130 QDMAGAVGLREVRYEPGKNHFARRDAEGPNPEYRPKDQSNPYFTFDPAKCIVCSRCVRAC 189 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + DSR D F C + C Q CP Sbjct: 190 EEVQGTFALTIEGRGF--------DSRVSA-----GLASDDFLSSDCVSCGACVQVCP 234 >gi|297570239|ref|YP_003691583.1| heterodisulfide reductase [Desulfurivibrio alkaliphilus AHT2] gi|296926154|gb|ADH86964.1| heterodisulfide reductase [Desulfurivibrio alkaliphilus AHT2] Length = 548 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + +R + + G+ L + Sbjct: 96 RSLKIFMDCCVRCGACADKCHFFLGTGDPKNMPVLRAELFRSVYRNDFTTAGKILGQIAG 155 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C C+ CP G++ A+ + +L Sbjct: 156 ARPMTFKVLKEWFMYFYQCTECRRCSVFCPYGIDTAEVTMMGRELL 201 >gi|239983641|ref|ZP_04706165.1| oxidoreductase [Streptomyces albus J1074] gi|291455451|ref|ZP_06594841.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291358400|gb|EFE85302.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 8/100 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPF 222 C+ C C +CPS +D P + R ++ +L Sbjct: 568 EPVADPCIECGFCEPTCPS----NDLTTTPRQRIVLRREMMRQPSGSPVEAKLLEAYGHD 623 Query: 223 RLYRCHTIMNCTQSCPKGLNP---AKAIAKIKMMLLDRKI 259 + C C +CP G++ KA + + ++ Sbjct: 624 AVDTCAGDSTCKLACPVGIDTGAMMKAFRHQRHSAREERV 663 >gi|228937827|ref|ZP_04100457.1| formate dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970708|ref|ZP_04131350.1| formate dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977285|ref|ZP_04137681.1| formate dehydrogenase [Bacillus thuringiensis Bt407] gi|228782424|gb|EEM30606.1| formate dehydrogenase [Bacillus thuringiensis Bt407] gi|228789010|gb|EEM36947.1| formate dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821862|gb|EEM67860.1| formate dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938308|gb|AEA14204.1| formate dehydrogenase alpha chain [Bacillus thuringiensis serovar chinensis CT-43] Length = 978 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + ++G A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|227541318|ref|ZP_03971367.1| FAD linked oxidase family protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182869|gb|EEI63841.1| FAD linked oxidase family protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 964 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 5/118 (4%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ + + D CV C C + CPS + P Sbjct: 536 HGILAPDIKLTRDQKLHIKNFKSHPKIEDIANPCVECGFCESVCPSRHVTTT----PRQR 591 Query: 197 LQAYRWLI-DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + D L + + C +C +CP ++ K + + M Sbjct: 592 IVIRREMARQPEDSPLLTNLLQQNEYDGINTCAVDSSCYIACPISIDTGKMVKLFRQM 649 >gi|254455285|ref|ZP_05068714.1| D-lactate dehydrogenase (cytochrome) [Candidatus Pelagibacter sp. HTCC7211] gi|207082287|gb|EDZ59713.1| D-lactate dehydrogenase (cytochrome) [Candidatus Pelagibacter sp. HTCC7211] Length = 966 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 11/124 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYL 191 RS+ + + Q D + C C CPSY + Sbjct: 525 RSLMRYKSGYQAQNINTHYDWSSWGQFSDAVEMCNNNGACRKLDSGVMCPSYRVTKEEKD 584 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + ++ + + L C + C + CP ++ +AK+K Sbjct: 585 LVRGRANTLRLALSNQLPEGSFASKEMYETMEL--CVSCKACQRECPMSVD----MAKMK 638 Query: 252 MMLL 255 L Sbjct: 639 SEFL 642 >gi|167534830|ref|XP_001749090.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772514|gb|EDQ86165.1| predicted protein [Monosiga brevicollis MX1] Length = 204 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 24/125 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L + + +F+ + + + H R+ G C+ C C Sbjct: 55 ATEIARGLGLTLRYFFK--KPATVYYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCE 112 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQ 235 CP+ QA + R++ R D C C + Sbjct: 113 AVCPA---------------QAITIETEPREDGSRRTTRYDIDMTK-----CIFCGFCQE 152 Query: 236 SCPKG 240 +CP Sbjct: 153 ACPVD 157 >gi|268323847|emb|CBH37435.1| acetyl-CoA decarbonylase/synthase complex, alpha subunit [uncultured archaeon] Length = 799 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 19/116 (16%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + K K L D + + +CV+C C+ +CP+ + + Sbjct: 373 DQVGEVAVRTALEMDKKRKSLKFILSDDEFKYYVNDCVLCGSCTLACPNGLYIGEANKSA 432 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + L D F + C C Q C K + + K Sbjct: 433 AAGN-----------------IKPLADLFDI--CVGCGRCEQVCKKHIPIVDVMTK 469 >gi|257460980|ref|ZP_05626080.1| iron-sulfur cluster-binding domain protein [Campylobacter gracilis RM3268] gi|257441643|gb|EEV16786.1| iron-sulfur cluster-binding domain protein [Campylobacter gracilis RM3268] Length = 434 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 8/92 (8%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY- 225 CV C C C + N D P + D + L ++ +++ Sbjct: 15 SERCVKCGKCIQICTIHGINGDEVTSPRGFV-------DLLGAYGRNELKLDKNAKKIFE 67 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C C C + L AI I+ + ++ Sbjct: 68 SCFLCTICVDICGESLPIDTAIENIRAHIAEK 99 >gi|221068604|ref|ZP_03544709.1| NADH-quinone oxidoreductase, chain I [Comamonas testosteroni KF-1] gi|264677206|ref|YP_003277112.1| NADH-quinone oxidoreductase, chain I [Comamonas testosteroni CNB-2] gi|299530750|ref|ZP_07044165.1| NADH dehydrogenase subunit I [Comamonas testosteroni S44] gi|220713627|gb|EED68995.1| NADH-quinone oxidoreductase, chain I [Comamonas testosteroni KF-1] gi|262207718|gb|ACY31816.1| NADH-quinone oxidoreductase, chain I [Comamonas testosteroni CNB-2] gi|298721266|gb|EFI62208.1| NADH dehydrogenase subunit I [Comamonas testosteroni S44] Length = 169 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R I + H R+ +G C+ C C CP+ + + Sbjct: 33 YTFRRKITVQFPEEKTPQSPRFRGLHALRRYENGEERCIACKLCEAVCPAMAITIESDVR 92 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 93 DDGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 122 >gi|88703573|ref|ZP_01101289.1| FixG-related protein [Congregibacter litoralis KT71] gi|88702287|gb|EAQ99390.1| FixG-related protein [Congregibacter litoralis KT71] Length = 469 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 9/76 (11%) Query: 183 YWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNLEDPF-RLYRCHTIMNC 233 +Y+ P Q+ + D+ R E +G R +L L C C Sbjct: 216 MREQVCKYMCPYARFQSVMFDADTLIVSYDAKRGEPRGSRKKSLAHKESGLGDCIDCELC 275 Query: 234 TQSCPKGLNPAKAIAK 249 Q CP G++ + Sbjct: 276 VQVCPTGIDIRDGLQY 291 >gi|150016338|ref|YP_001308592.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902803|gb|ABR33636.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 1172 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ CP ++L ++ D + + + Sbjct: 682 PEWQTDKCIQCGQCAFICP--HATVRQFLVDESEMKNA-----PEDFITKKAAGKGLENY 734 Query: 223 RLYR-------CHTIMNCTQSCPKGLNPAKAIA 248 YR C NC CP P KA+ Sbjct: 735 G-YRIQIAPLDCTGCGNCADVCPA---PGKALI 763 >gi|332669064|ref|YP_004452072.1| FAD linked oxidase domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338102|gb|AEE44685.1| FAD linked oxidase domain protein [Cellulomonas fimi ATCC 484] Length = 985 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C CPSY D + + + + +G + Sbjct: 561 HRCVGVGKCRADGRETGAFMCPSYLATKDEKDSTRGRARVLQDMANGSLVSRGWSSPEVH 620 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C+ CP G++ Sbjct: 621 DV--LDLCLSCKACSSDCPAGVD 641 >gi|291515634|emb|CBK64844.1| hypothetical protein AL1_26620 [Alistipes shahii WAL 8301] Length = 111 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 15/100 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +S E +++ L C+ C C+ C + + + R Sbjct: 24 RKSDEILREMPELQTCIGCGACTAVCTAGNLT--EFNFRKVHTLVRRGEYQG-------A 74 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +C C CP+G+N + IK L Sbjct: 75 YEEMN------KCMLCGKCRLVCPRGINTRGVVMLIKRKL 108 >gi|212223685|ref|YP_002306921.1| sulfhydrogenase beta subunit [Thermococcus onnurineus NA1] gi|212008642|gb|ACJ16024.1| sulfhydrogenase beta subunit [Thermococcus onnurineus NA1] Length = 367 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 23/150 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V ++ + + F + + + L+ E +C C CS Sbjct: 182 FTEVAQEDICNFREFERKRAQAFRYHEEWDNIHYLLELEM-EHPLWEKEAEKCFACGNCS 240 Query: 178 TSCPS--------------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 T CP+ W+S ++ ++ + + +D F L Sbjct: 241 TVCPTCRCYEVQDIVNLDGDTGYRERRWDSCKFRSHGLVAGGHNFRPTKKDRFINRYLCK 300 Query: 218 LEDPF--RLYRCHTIMNCTQSCPKGLNPAK 245 + + + C CT CP G++ K Sbjct: 301 MSFHWTLGINFCVGCGRCTAFCPAGIDFVK 330 >gi|188583907|ref|YP_001927352.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium populi BJ001] gi|179347405|gb|ACB82817.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium populi BJ001] Length = 990 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D + R I + ++ Sbjct: 575 EMCNNNGTCRKLAGGAMCPSYRATRDEQHLTRGRANSLRLAISGQLGADAFVSPEMKRTM 634 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 L C + C + CP G++ AK Sbjct: 635 DL--CVSCKACRRECPTGVDMAK 655 >gi|149277726|ref|ZP_01883866.1| probable ferredoxin [Pedobacter sp. BAL39] gi|149231414|gb|EDM36793.1| probable ferredoxin [Pedobacter sp. BAL39] Length = 464 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ CP Y L ++ AY + R E + +R+ ++ C C Sbjct: 219 CTVVCP-YGRLQGVLLDNQSIIVAYDYE---RGEPREKRVKGAQNIAG--DCIDCKLCVD 272 Query: 236 SCPKGLNP 243 CP G++ Sbjct: 273 VCPTGIDI 280 >gi|150403130|ref|YP_001330424.1| aldo/keto reductase [Methanococcus maripaludis C7] gi|150034160|gb|ABR66273.1| aldo/keto reductase [Methanococcus maripaludis C7] Length = 409 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 43/147 (29%), Gaps = 16/147 (10%) Query: 116 LPHMSVIKDL--VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L H V L + + S + E E+ +D K C C Sbjct: 239 LNHEEVTCVLSGMNEESQVKENLKVAEETTPNSLSSEELEIYDKVKDVYKKLMKINCTAC 298 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG----ERLDNLE--DPFRLYRC 227 C CP + + + + + D+ G RL + + C Sbjct: 299 GYCMP-CP-----FGVDIPACFSMYNEKSIFN--DKKTGFLYLARLGGVMGGEESHAGLC 350 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMML 254 C ++CP+ LN + + L Sbjct: 351 TNCGKCVKACPQNLNIPVLLKDVSREL 377 >gi|94267838|ref|ZP_01291004.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451835|gb|EAT02579.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 723 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 19/92 (20%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C C C+ C Y P + A+ D + Sbjct: 316 ASHCTRCGACAARC----AFLQEYGLPGDIAAAWAAGSGKVDP---------------FA 356 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C C CP+ L P + +++ Sbjct: 357 CSLCNLCAAVCPEQLEPGIFLLELRRRAATAA 388 >gi|87123593|ref|ZP_01079444.1| NADH dehydrogenase I chain I (or NdhI) [Synechococcus sp. RS9917] gi|86169313|gb|EAQ70569.1| NADH dehydrogenase I chain I (or NdhI) [Synechococcus sp. RS9917] Length = 218 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 ++ + L V H + +++ + + P +E L +C+ C C Sbjct: 19 ARNLTQGLAVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYE-------LDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKDLRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|296137375|ref|YP_003644617.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295797497|gb|ADG32287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 736 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 65/237 (27%), Gaps = 27/237 (11%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPT 73 P ++ R + + VD+++ P+ LD + + Sbjct: 171 HEHPVHAGRVRSVR-----------GWLGAFEVDIESANPVDLDVCTRCNACLAACPEGA 219 Query: 74 LTLRRSCREGIC---GSCGMNIDGTNTLACVKDMKDIKGAIAV----YPLPHMSVIKDLV 126 + L C C + + + + + P P +S+ + Sbjct: 220 IGLDYQIDLQRCAGHRDCVQACGAIGAIDFNRRPRADTLQVDLVLDLQPQPSLSLHQPPQ 279 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQS--HEDRQKIDGLYECVMCACCSTSCPSYW 184 + + + K + + + ++ + + C C C + Sbjct: 280 GYYAPGTDPLALVRAATELRDLKGSFDKPRFFQYDAKLCAHSRNTLLGCHACIDICSAQA 339 Query: 185 WNSDRYLGP-AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +S L P A I + ++ +E L C CT CP G Sbjct: 340 VHSRARLRPDQTPPIAEADSILPTAAQKKPFVEQIEIDPHL--CVGCGACTTVCPTG 394 >gi|157375011|ref|YP_001473611.1| D-lactate dehydrogenase (cytochrome) [Shewanella sediminis HAW-EB3] gi|157317385|gb|ABV36483.1| D-lactate dehydrogenase (cytochrome) [Shewanella sediminis HAW-EB3] Length = 1019 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 35/136 (25%), Gaps = 31/136 (22%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRYLGPA 194 + + + + E R+ + C C CPS+ DR P Sbjct: 555 IYNVDSVKRGSFDRQIPMETREAFPDVMNCNGNGLCFNYSAYSPMCPSFKVTGDRVQSPK 614 Query: 195 ILLQAYR-----------------------WLIDSRDEFQGERLDNLEDP--FRLYRCHT 229 R WL +++ + R + L C Sbjct: 615 GRAGLMREWLRLLESEGVDVDALAKSKPLGWLQRTQNTLKASREYDYSHEVMESLKGCLA 674 Query: 230 IMNCTQSCPKGLNPAK 245 CT CP ++ K Sbjct: 675 CKACTSQCPVKVDVPK 690 >gi|91203927|emb|CAJ71580.1| strongly similar to NADH dehydrogenase I subunit I [Candidatus Kuenenia stuttgartiensis] Length = 139 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 18/120 (15%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 + ++K L++ + F + + P+ AK E + DG +CV C C+ Sbjct: 3 LPLVKGLLLTLKRFLNPFTCVTESYPDARPRLAKRFRGLPELQIGEDGREKCVACGLCAK 62 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CPS + I+ ++ Q R ++ + +RC C ++CP Sbjct: 63 VCPSQCIS-----------------IEGAEDEQFRRYPSMYELDS-FRCIFCGFCEEACP 104 >gi|114048689|ref|YP_739239.1| formate dehydrogenase subunit alpha [Shewanella sp. MR-7] gi|113890131|gb|ABI44182.1| formate dehydrogenase, alpha subunit [Shewanella sp. MR-7] Length = 1432 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 25/96 (26%), Gaps = 8/96 (8%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + A+ C+ C C C QA + Sbjct: 633 TENARHFSVDKSAPFIQFDANRCISCGKCVDVC-QLQSGHCAIQFSQDSYQALPQEMTQH 691 Query: 208 DEFQGERL---DNLEDPFRLYRCHTIMNCTQSCPKG 240 E + R+ ++ D C NC Q CP G Sbjct: 692 MERRAPRVGFSASMADSH----CVQCGNCVQVCPTG 723 >gi|328953785|ref|YP_004371119.1| NAD(P)H-quinone oxidoreductase subunit I [Desulfobacca acetoxidans DSM 11109] gi|328454109|gb|AEB09938.1| NAD(P)H-quinone oxidoreductase subunit I [Desulfobacca acetoxidans DSM 11109] Length = 134 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 31/104 (29%), Gaps = 19/104 (18%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW-WNSDRYLGPAI 195 + I + E + +G +CV C C T CPS + G Sbjct: 19 KPITIQYPEERRPVSDRFRGRPELQLHENGKVKCVACTLCKTVCPSQAILAIEAAEGTYG 78 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 R+ ID L RC C ++CPK Sbjct: 79 EKYPIRFEID------------------LTRCIFCGFCQEACPK 104 >gi|197285067|ref|YP_002150939.1| ferredoxin [Proteus mirabilis HI4320] gi|227355471|ref|ZP_03839867.1| polyferredoxin [Proteus mirabilis ATCC 29906] gi|194682554|emb|CAR42571.1| putative ferredoxin [Proteus mirabilis HI4320] gi|227164458|gb|EEI49342.1| polyferredoxin [Proteus mirabilis ATCC 29906] Length = 294 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 36/156 (23%) Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 L + I + V P P D F + V Sbjct: 129 NLQLKTLQEPIWQLVLVEPEP-----VDSGRRFMLFRQKLDEKPLNKGHVKTGLNARKQL 183 Query: 157 SHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +D L + C++C+ C+ C AI ++ R++ID + Sbjct: 184 YPQDSWFHIQLDKESCILCSACAKVCDE----------GAITIEDNRFIIDEK------- 226 Query: 215 LDNLEDPFRLYRCHTIMNCTQSC-PKGLNPAKAIAK 249 RC MNC C PK + + IAK Sbjct: 227 -----------RCTGCMNCQVVCFPKSIKVVEQIAK 251 >gi|161527746|ref|YP_001581572.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339047|gb|ABX12134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosopumilus maritimus SCM1] Length = 163 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 5/75 (6%) Query: 168 YECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFR 223 CV C +CP + W PA + + + + ER D + DP R Sbjct: 69 DSCVADGACIEACPVQVFQWYRTEKDIPAKDVVGQTFEG-TGSSVKDERKDMTDKADPIR 127 Query: 224 LYRCHTIMNCTQSCP 238 + C M C CP Sbjct: 128 EHDCIWCMACVSVCP 142 >gi|56420066|ref|YP_147384.1| glycolate oxidase iron-sulfur subunit [Geobacillus kaustophilus HTA426] gi|56379908|dbj|BAD75816.1| glycolate oxidase iron-sulfur subunit [Geobacillus kaustophilus HTA426] Length = 377 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 15/31 (48%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ C CT +CP ++ I +++ L Sbjct: 9 IFTCLDCRACTTACPADVDVGGLIEQVRGQL 39 >gi|87303125|ref|ZP_01085923.1| pyruvate flavodoxin oxidoreductase [Synechococcus sp. WH 5701] gi|87282292|gb|EAQ74252.1| pyruvate flavodoxin oxidoreductase [Synechococcus sp. WH 5701] Length = 1190 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 25/91 (27%), Gaps = 11/91 (12%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI-----DSR 207 ++ + + CV C C CP + + + PA L A D Sbjct: 684 WEKRNIAESVPVWDDDICVQCGKCVMVCP-HAAIRAKVVEPAALADAPEGFASTAARDPH 742 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L + C C + CP Sbjct: 743 WSGLSFTLQVAGED-----CTGCGLCVEVCP 768 >gi|295402233|ref|ZP_06812190.1| formate dehydrogenase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294975728|gb|EFG51349.1| formate dehydrogenase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 987 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 49/206 (23%), Gaps = 32/206 (15%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVK------- 102 D + M + ++ P + C +C + +DG AC Sbjct: 14 DYNAKQGMTILEVVNENGIPHPQVCYTPELGAIQTCDTCIVEVDGKLVRACSTPAENGMN 73 Query: 103 ------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 K + L + + + + + H + E P + + Sbjct: 74 VELASARAKAAQKEAMDRILENHLLYCTVCDNNNGNCKLHNTAELMGIEHQSYPYRPKVD 133 Query: 157 SHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E C+ C C C + N + R + D+ Sbjct: 134 PSEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWEAERP--RVIWDNGVPINE 191 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + C CP Sbjct: 192 S------------SCVSCGQCVTVCP 205 >gi|158521174|ref|YP_001529044.1| heterodisulfide reductase subunit C-like protein [Desulfococcus oleovorans Hxd3] gi|158510000|gb|ABW66967.1| Heterodisulfide reductase subunit C-like protein [Desulfococcus oleovorans Hxd3] Length = 203 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 12/95 (12%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L C C C+ +C + P L++A G+R L + + Sbjct: 26 QNLLACYQCRRCAGACSVGDETD--FFTPDRLIRAILL---------GDRQTVLNNEL-I 73 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ++C + C CP G+ + +K M + + Sbjct: 74 WKCVSCYTCGIRCPNGIQTGRITETLKKMAKEAHL 108 >gi|15645880|ref|NP_208058.1| NADH dehydrogenase subunit G [Helicobacter pylori 26695] gi|2314431|gb|AAD08310.1| NADH-ubiquinone oxidoreductase, NQO3 subunit (NQO3) [Helicobacter pylori 26695] Length = 844 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILT 72 Query: 113 VYP---------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED--- 160 P + V L + + + T + + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDF 132 Query: 161 -RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|310828230|ref|YP_003960587.1| RnfC [Eubacterium limosum KIST612] gi|308739964|gb|ADO37624.1| RnfC [Eubacterium limosum KIST612] Length = 446 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 20/100 (20%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 I C+ C C+ +CP + L P + L AY + ER + E+ Sbjct: 362 AAYIPEPSNCIRCGKCAEACPIH-------LQP-LYLAAY---------SEKERWEKCEE 404 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML--LDRK 258 L C +C+ CP +I K + L +K Sbjct: 405 YHAL-DCIECGSCSFICPAKRTLVSSIRVAKRQVTALKKK 443 >gi|298735710|ref|YP_003728235.1| NADH dehydrogenase I subunit G [Helicobacter pylori B8] gi|298354899|emb|CBI65771.1| NADH dehydrogenase I chain G [Helicobacter pylori B8] Length = 844 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 39/197 (19%) Query: 72 PTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYP---------LPHMSV 121 PT+ C + C C + +DG +C K+ + P + V Sbjct: 31 PTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNATILTNTPTLMDERKSIMQTYDV 90 Query: 122 IKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCS 177 L V D S P + ++ + K C+MC C Sbjct: 91 NHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNLCIMCERCV 150 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR----------- 226 T+C ++ L+A + + + D+F+ +D F ++ Sbjct: 151 TTCKDNVGENN--------LKATKADLHAPDKFKD---SMSKDAFSVWSRKQKGIISFVG 199 Query: 227 ---CHTIMNCTQSCPKG 240 C+ C CP G Sbjct: 200 SVPCYDCGECIAVCPVG 216 >gi|312112276|ref|YP_003990592.1| formate dehydrogenase, subunit alpha [Geobacillus sp. Y4.1MC1] gi|311217377|gb|ADP75981.1| formate dehydrogenase, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 987 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 49/206 (23%), Gaps = 32/206 (15%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVK------- 102 D + M + ++ P + C +C + +DG AC Sbjct: 14 DYNAKQGMTILEVVNENGIPHPQVCYTPELGAIQTCDTCIVEVDGKLVRACSTPAENGMN 73 Query: 103 ------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 K + L + + + + + H + E P + + Sbjct: 74 VELASARAKAAQKEAMDRILENHLLYCTVCDNNNGNCKLHNTAELMGIEHQSYPYRPKVD 133 Query: 157 SHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E C+ C C C + N + R + D+ Sbjct: 134 PSEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWEAERP--RVIWDNGVPINE 191 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + C CP Sbjct: 192 S------------SCVSCGQCVTVCP 205 >gi|163786754|ref|ZP_02181202.1| hypothetical protein FBALC1_16252 [Flavobacteriales bacterium ALC-1] gi|159878614|gb|EDP72670.1| hypothetical protein FBALC1_16252 [Flavobacteriales bacterium ALC-1] Length = 106 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 8/106 (7%) Query: 103 DMKDIKGAIAVYPLPH--MSVIKDLVVDMSHF--YSQHRSIEPWLKTVSPKPAKELLQSH 158 M I + P VIKDLVVD F Q + + + A + S Sbjct: 2 RMFKDGDTITIEPFRAAAFPVIKDLVVDRMAFERIQQAGGYISVNTSGNTQDANAIPISK 61 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + C+ C C +C NS L + Y + Sbjct: 62 HAADEAMDAATCIGCGACVATCK----NSSAMLFVGAKVSQYALYL 103 >gi|16120273|ref|NP_395861.1| hypothetical protein VNG6379C [Halobacterium sp. NRC-1] gi|169237639|ref|YP_001690842.1| putative iron-sulfur protein (4Fe-4S) [Halobacterium salinarum R1] gi|10584411|gb|AAG20996.1| Vng6379c [Halobacterium sp. NRC-1] gi|167728416|emb|CAP15230.1| putative iron-sulfur protein (4Fe-4S) [Halobacterium salinarum R1] Length = 727 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQG 212 ++ ED Q + LY C+ C+ C+ SC ++ G A W E Sbjct: 301 MEMREDDQLRETLY-CIRCSACANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSA 359 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ++L C C CP ++ Sbjct: 360 AEFNDL--------CTGCSRCVNQCPVNIDI 382 >gi|328905957|gb|EGG25733.1| pyruvate-flavodoxin oxidoreductase [Propionibacterium sp. P08] Length = 1206 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + ++ S+ E E Sbjct: 690 DVIATWEPNACIQCGNCAFVCP-------------HGVIRAKYYPQSQLEGAPESFQSAE 736 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 737 LNAAGLPESCYTLQIVPDQCTGCGLCVEACPAH 769 >gi|329964881|ref|ZP_08301889.1| FAD binding domain protein [Bacteroides fluxus YIT 12057] gi|328524522|gb|EGF51590.1| FAD binding domain protein [Bacteroides fluxus YIT 12057] Length = 965 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 58/230 (25%), Gaps = 39/230 (16%) Query: 40 KGNPCMDTYYVDLDNCGPMV-----LDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDG 94 +D Y + + L +L +K K D L R + + Sbjct: 416 DMKEMLDGYGLSCVYHAHISTGELHLRPVLNLKEKKDRKL-FRTVAT----KTAELVRKH 470 Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 +L+ + L V L+ ++ + +P +L Sbjct: 471 RGSLSGEHGD-GRLRGEFIPLLLGQKVY-SLLKEVKEIWDSPHIFNMGKIVDTPPMDADL 528 Query: 155 LQSHEDRQKIDGLYE------------CVMCACCS-------TSCPSYWWNSDRYLGPAI 195 +D C C T CP+Y D Sbjct: 529 RYEQQDLGVNTYFDYSRQKGWLCAIEQCNGSGDCRKSDLFGGTMCPTYRATRDEKNTTRA 588 Query: 196 LLQAYR-WLIDS--RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R LI +D F E + + D C + C CP ++ Sbjct: 589 RANTLRELLIHPLQKDIFNQEEILIVLDT-----CVSCKACKSECPSNVD 633 >gi|313835283|gb|EFS72997.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL037PA2] gi|314928233|gb|EFS92064.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL044PA1] gi|314970064|gb|EFT14162.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL037PA3] Length = 1204 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + ++ S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-------------HGVIRAKYYPQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQIVPDQCTGCGLCVEACPAH 767 >gi|312890862|ref|ZP_07750391.1| cytochrome c oxidase accessory protein CcoG [Mucilaginibacter paludis DSM 18603] gi|311296645|gb|EFQ73785.1| cytochrome c oxidase accessory protein CcoG [Mucilaginibacter paludis DSM 18603] Length = 457 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 8/82 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG--ERLDNLEDP 221 +Y V C+ CP Y + L+ AY D R E +G ER+ NL +P Sbjct: 198 FYLVYSQVRELVCTLICP-YGRLQSVLIDQHTLVVAY---NDVRGEPRGKLERVPNLLNP 253 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 254 KG--DCVDCGLCVAVCPTGIDI 273 >gi|301629607|ref|XP_002943929.1| PREDICTED: protein rdxA-like [Xenopus (Silurana) tropicalis] Length = 470 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 9/86 (10%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNL 218 + +Y+ P Q+ + D+ R E +G R + Sbjct: 196 FWVFFYSFATYGFAGHMREQVCKYMCPYARFQSAMFDKDTLIVTYDGQRGEPRGARSKKV 255 Query: 219 E-DPFRLYRCHTIMNCTQSCPKGLNP 243 + L C C Q CP G++ Sbjct: 256 DPKAAGLGDCIDCSLCVQVCPTGIDI 281 >gi|224369369|ref|YP_002603533.1| FdhB6 [Desulfobacterium autotrophicum HRM2] gi|223692086|gb|ACN15369.1| FdhB6 [Desulfobacterium autotrophicum HRM2] Length = 375 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + L CV C C +CP + + +Y + R +D+ F Sbjct: 248 NYLSACVNCYNCRVACPVCFCRECVFNTDVFDYEPFQYATWSKNRGTLRMPMDT-VFFHM 306 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ ++ L C C+ +CP + A+ Sbjct: 307 TRMIHM----GL-SCVGCGQCSNACPNDIPLAEL 335 >gi|119897695|ref|YP_932908.1| NADH dehydrogenase subunit I [Azoarcus sp. BH72] gi|156632702|sp|A1K5B6|NUOI_AZOSB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|119670108|emb|CAL94021.1| putative NADH-ubiquinone oxidoreductase, chain I [Azoarcus sp. BH72] Length = 161 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + HF++ R I + H R+ +G C+ C C Sbjct: 14 ELVKGMALTGRHFFA--RKITVQFPEEKTPQSARFRGLHALRRYPNGEERCIACKLCEAI 71 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L +C C ++CP Sbjct: 72 CPAMAITIESEQREDGSRRTSRYDID------------------LTKCIFCGFCEEACPV 113 Query: 240 G 240 Sbjct: 114 D 114 >gi|83859989|ref|ZP_00953509.1| ferredoxin, putative [Oceanicaulis alexandrii HTCC2633] gi|83852348|gb|EAP90202.1| ferredoxin, putative [Oceanicaulis alexandrii HTCC2633] Length = 497 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 23/81 (28%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C+ CP + L YR R E +G E Sbjct: 227 YVLAGTMREQVCTYMCPWPRIQG-ALIDKEALSVTYRVD---RGEPRGRHKKG-ESWEGR 281 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C +CP G++ Sbjct: 282 GDCIDCKACVAACPMGIDIRD 302 >gi|323702417|ref|ZP_08114081.1| sulfite reductase, subunit A [Desulfotomaculum nigrificans DSM 574] gi|323532556|gb|EGB22431.1| sulfite reductase, subunit A [Desulfotomaculum nigrificans DSM 574] Length = 335 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 63/225 (28%), Gaps = 40/225 (17%) Query: 62 GLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSV 121 Y ++ L SC GTN + + V Sbjct: 116 APDYYYKQLRDKLKFILMDCPLSFDSCFCVSMGTNRTDNYSASIRPENGSYL-----CHV 170 Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTV----SPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +D+ + F ++ + +L + + CV C C+ Sbjct: 171 QEDINGLFASFGQPQEVTPLYVTENKITVNVPANLDLSAIIDHPIWQEYGRRCVSCGRCN 230 Query: 178 TSCPSYW--WNSDRYLGPAILLQAYRWLIDS----------------RDEFQGERLDNLE 219 TSCP+ D + R + S R++ Q R L Sbjct: 231 TSCPTCSCFTMQDIFYQDNPKCGERRRVWASCQIDGFTDMAGGHSFRREQSQRMRFKVLH 290 Query: 220 ------DPFRLYRCHTIMNCTQSCPKGLN-------PAKAIAKIK 251 + F ++ C C CP+ ++ A+A+ ++K Sbjct: 291 KVYDFKERFGIHMCVGCGRCDDVCPEYISFSRCVNKLAEAVQEVK 335 >gi|258542560|ref|YP_003187993.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256633638|dbj|BAH99613.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256636697|dbj|BAI02666.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-03] gi|256639750|dbj|BAI05712.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-07] gi|256642806|dbj|BAI08761.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-22] gi|256645861|dbj|BAI11809.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-26] gi|256648914|dbj|BAI14855.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-32] gi|256651901|dbj|BAI17835.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654958|dbj|BAI20885.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Acetobacter pasteurianus IFO 3283-12] Length = 1195 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 32/95 (33%), Gaps = 23/95 (24%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLG--PAILLQA---YRWLIDSRDEFQGERL 215 C+ C CS CP ++ LG P A R DSR Q Sbjct: 693 WNPDTCIQCGQCSIVCPHSVIRAKTYEEKDLGGAPESFKSAPVNARGYPDSRFTLQ---- 748 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNP---AKAI 247 F + C C ++CP +NP +AI Sbjct: 749 ------FYVEDCTGCGVCVENCPA-INPDGETRAI 776 >gi|302877067|ref|YP_003845700.1| aldo/keto reductase [Clostridium cellulovorans 743B] gi|307687758|ref|ZP_07630204.1| aldo/keto reductase [Clostridium cellulovorans 743B] gi|302579924|gb|ADL53936.1| aldo/keto reductase [Clostridium cellulovorans 743B] Length = 385 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 4/145 (2%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A +K V+ P +SV+ + M + R L + E++ + Sbjct: 233 ADIKRSPAEWALRWVWNHPEVSVVLSGMNTMDNVVENVRVASEALPNSLTEKEVEIMDNV 292 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + K C C C CP+ + + + ++ + ++ ER +++ Sbjct: 293 KKSFKERIKVNCTGCEYCMP-CPAGVNIPRNF---SCYNEYSIFVTPATEKELKERYNSI 348 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNP 243 + R +C C CP+ + Sbjct: 349 SEAERADKCVECGKCESHCPQAIKI 373 >gi|237808455|ref|YP_002892895.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Tolumonas auensis DSM 9187] gi|237500716|gb|ACQ93309.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Tolumonas auensis DSM 9187] Length = 459 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 19/116 (16%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +D C C C+ CP + + L P +L++A + Sbjct: 249 EDHLIIQRRKRSDDAILNMAKTVCEQCGLCTELCPRHIIGHE--LPPHLLVRAMNY---- 302 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCT----QSCPKGLNPAKAIAKIKMMLLDRK 258 + P L T C+ +CP ++P + +K L + Sbjct: 303 ---------QQVATPSILLSALTCSECSVCESYACPVEISPMRINQLLKKQLRQQG 349 >gi|153864448|ref|ZP_01997348.1| electron transport protein dsrK [Beggiatoa sp. SS] gi|152146058|gb|EDN72653.1| electron transport protein dsrK [Beggiatoa sp. SS] Length = 321 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 32/106 (30%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-----------IDSRDE 209 R L CV C C+ C D P R + + Sbjct: 67 RSLRVYLDACVKCGACTDKCHYMIGTHDPKNMPVARQDLLRQVYRRYFTLAGKWLPKLVG 126 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D L+D + Y C C+ CP G++ A + +L Sbjct: 127 AKDLTKDILDDWYNYYHQCSQCRRCSVFCPYGIDTADISMAAREIL 172 >gi|328869461|gb|EGG17839.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium fasciculatum] Length = 213 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++ L + M +F+ + +I + + H R+ G C+ C C Sbjct: 66 EIMVGLYITMGYFFRKKCTINYPFEKG--PLSPRFRGEHALRRYPTGEERCIACKLCEAI 123 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 124 CPAQAITIEAEPRLDGSRRTTRYDIDMT------------------KCIYCGFCQEACPV 165 Query: 240 G 240 Sbjct: 166 D 166 >gi|317011466|gb|ADU85213.1| NADH dehydrogenase subunit G [Helicobacter pylori SouthAfrica7] Length = 849 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED 160 P + V L V D S P + ++ + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDS 132 Query: 161 RQKI-DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 K C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSAPCYDCGECIAVCPVG 216 >gi|308126604|ref|ZP_05911330.2| putative formate dehydrogenase, alpha subunit [Vibrio parahaemolyticus AQ4037] gi|308107825|gb|EFO45365.1| putative formate dehydrogenase, alpha subunit [Vibrio parahaemolyticus AQ4037] Length = 1422 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 6/105 (5%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQ 198 + WL + + C+ C C +C + ++ Sbjct: 610 QDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLSFVSDKNGRP 669 Query: 199 AYRWLIDSRDEFQGERLDNLEDP---FRLYRCHTIMNCTQSCPKG 240 A R D R F+ + +C C Q+CP G Sbjct: 670 ALR--PDDRPRFRSDEKGASCSGLTLMGDSKCVQCGACVQACPTG 712 >gi|257125175|ref|YP_003163289.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Leptotrichia buccalis C-1013-b] gi|257049114|gb|ACV38298.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Leptotrichia buccalis C-1013-b] Length = 1189 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 59/213 (27%), Gaps = 21/213 (9%) Query: 37 PDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTN 96 P ++ M Y + G D + + ID + G + + Sbjct: 573 PHDEAKEYMKEYAE--KSYGRKGQDIVQKNWDAIDRGI----------DGLEEVEV--LP 618 Query: 97 TLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 A ++ + I A + ++ +L+ S + A + Sbjct: 619 EWADLEVNEQIIEAAKPEFIKKIADPINLMKGNELPVSSIIENGMVDGSFQHGTAHYEKR 678 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 D C+ C C+ CP +L + + + G ++ Sbjct: 679 GIADEVPEWQPDMCIQCNQCAYVCP--HAVIRPFLIDEEEMAKAPEGM-PTIKALGRGMN 735 Query: 217 NLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAI 247 +L ++ C C CP KAI Sbjct: 736 DLNYKIQVSPLDCTGCSACVDVCPA--PRGKAI 766 >gi|217034075|ref|ZP_03439496.1| hypothetical protein HP9810_893g22 [Helicobacter pylori 98-10] gi|216943470|gb|EEC22924.1| hypothetical protein HP9810_893g22 [Helicobacter pylori 98-10] Length = 946 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + +E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIECLKERVSHGHNEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 >gi|109946839|ref|YP_664067.1| NADH dehydrogenase subunit G [Helicobacter acinonychis str. Sheeba] gi|109714060|emb|CAJ99068.1| NADH dehydrogenase I chain G [Helicobacter acinonychis str. Sheeba] Length = 830 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 39/197 (19%) Query: 72 PTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYP---------LPHMSV 121 PT+ C + C C + +DG +C K+ + P + V Sbjct: 31 PTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNAVILTNTPTLMDERKSIMQTYDV 90 Query: 122 IKDL---VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI-DGLYECVMCACCS 177 L V D S P + ++ + K C+MC C Sbjct: 91 NHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNLCIMCERCV 150 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR----------- 226 T+C ++ L+A + + + D+F+ +D F ++ Sbjct: 151 TTCKDNVGENN--------LKATKADLHAPDKFKD---SMSKDAFSVWSRKQKGIISFVG 199 Query: 227 ---CHTIMNCTQSCPKG 240 C+ C CP G Sbjct: 200 SAPCYDCGECIAVCPVG 216 >gi|95931038|ref|ZP_01313766.1| ferredoxin-dependent glutamate synthase [Desulfuromonas acetoxidans DSM 684] gi|95132934|gb|EAT14605.1| ferredoxin-dependent glutamate synthase [Desulfuromonas acetoxidans DSM 684] Length = 547 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 10/93 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C +C C +C + ++ + L D R F + ++ Sbjct: 16 WKLRYDASRCTLCGSCVAACSFRAIEPK--IERRRMVFSEGDLPDPRARFSA--VPVIQQ 71 Query: 221 PFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKM 252 L C C + CP AIA ++ Sbjct: 72 VNSLKNYCRGCGICEKVCPN-----DAIAPVRN 99 >gi|308050430|ref|YP_003913996.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] gi|307632620|gb|ADN76922.1| D-lactate dehydrogenase (cytochrome) [Ferrimonas balearica DSM 9799] Length = 946 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 11/130 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D + +C+ C C C ++ L P Sbjct: 513 AGILNPGVIINDDPDCHAKGFKPLPTIHDIVDKCIECGFCEAHCVAHGLT----LSPRQR 568 Query: 197 LQAYRWLIDSRDEFQG-ERLDNLEDPFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIKM 252 R + E L +L+ + + T C CP G++ K + ++ Sbjct: 569 TAVARVIKTLETTGAEPEVLADLKKQYPYFALDTCAADGLCKMGCPMGIDTGKFVKAMRA 628 Query: 253 MLL---DRKI 259 DRKI Sbjct: 629 EYASEGDRKI 638 >gi|148240626|ref|YP_001226013.1| NADH dehydrogenase subunit I [Synechococcus sp. WH 7803] gi|156632628|sp|A5GP51|NDHI_SYNPW RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|147849165|emb|CAK24716.1| NAD(P)H-quinone oxidoreductase subunit I [Synechococcus sp. WH 7803] Length = 218 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 ++ + L V H + +++ + + P +E +C+ C C Sbjct: 19 ARNLTQGLAVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|21492667|ref|NP_659741.1| electron transfer ferredoxin B protein [Rhizobium etli CFN 42] gi|190894299|ref|YP_001984593.1| electron transfer ferredoxin B protein [Rhizobium etli CIAT 652] gi|218672290|ref|ZP_03521959.1| electron transfer ferredoxin B protein [Rhizobium etli GR56] gi|21467092|gb|AAM54755.1| electron transfer ferredoxin B protein [Rhizobium etli CFN 42] gi|190699960|gb|ACE94043.1| electron transfer ferredoxin B protein [Rhizobium etli CIAT 652] gi|327189609|gb|EGE56760.1| electron transfer ferredoxin B protein [Rhizobium etli CNPAF512] Length = 105 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 3/96 (3%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 P ++ + C+ C C +C S +G A + Sbjct: 1 MTGPFVTRDGSSWVPEYLTCIDATTCIGCGRCFKAC-SREVMHLYGVGEAGEILGICDDE 59 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + R+ + D RC C + CPK Sbjct: 60 EEDFDGELNRMIMVVDEAG--RCIGCGACARVCPKN 93 >gi|311893789|dbj|BAJ26197.1| putative oxidoreductase [Kitasatospora setae KM-6054] Length = 972 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 7/80 (8%) Query: 168 YECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + CV C + CPSY + + ++ R E + + E Sbjct: 551 HRCVGVGTCVDTSSGVMCPSYMVTGEERHSTRGRARLLGEML--RGELVADGWRSPEVRE 608 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 L C C CP ++ Sbjct: 609 ALDLCLGCKGCASDCPVHVD 628 >gi|254439636|ref|ZP_05053130.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 307] gi|198255082|gb|EDY79396.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 307] Length = 477 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 7/63 (11%) Query: 190 YLGPAILLQAYRWLIDS-------RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 Y P +QA D+ R + + + C M C CP G++ Sbjct: 215 YAFPWPRIQAAMMDEDTITIGYRARRGEPRKHSAEITEDTPQGDCIDCMACVNVCPVGID 274 Query: 243 PAK 245 Sbjct: 275 IRD 277 >gi|170024152|ref|YP_001720657.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|169750686|gb|ACA68204.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Yersinia pseudotuberculosis YPIII] Length = 1177 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 13/116 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMAGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIKMMLLDRKI 259 + D + L C C + CP KAI ++ L R + Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MRPHLEHRAV 779 >gi|4972241|emb|CAB43935.1| pyruvate ferredoxin oxidoreductase [Clostridium pasteurianum] Length = 1175 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 4/80 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C CS CP +L + S+ + + L Sbjct: 683 PEWQVDKCIQCNQCSYVCP--HAVIRPFLLTEEETKNAPEGFTSKPALGLKTAEKLNFAI 740 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++ C NC Q CP Sbjct: 741 KISPLDCTGCGNCAQVCPAK 760 >gi|5911353|gb|AAD55756.1|AF132673_1 pyruvate:ferredoxin oxidoreductase [Clostridium pasteurianum] Length = 1098 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 4/80 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C CS CP +L + S+ + + L Sbjct: 682 PEWQVDKCIQCNQCSYVCP--HAVIRPFLLTEEETKNAPEGFTSKPALGLKTAEKLNFAI 739 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++ C NC Q CP Sbjct: 740 KISPLDCTGCGNCAQVCPAK 759 >gi|206890334|ref|YP_002247860.1| DsrK protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742272|gb|ACI21329.1| DsrK protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 537 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSRDEF 210 R + CV C C+ C + D P + + R + + R+ Sbjct: 85 RTFHVFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRKYFTSGGKLFGRNGG 144 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + ++ + Y+C C+ CP G++ A+ I I LL Sbjct: 145 ARDLDIDVLKELWYYFYQCTECRRCSLFCPYGIDTAE-ITIIARELL 190 >gi|269467778|gb|EEZ79539.1| intracellular sulfur oxidation protein DsrK [uncultured SUP05 cluster bacterium] Length = 455 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID----------SRDEF 210 R L CV C C+ C + +SD P +R + + Sbjct: 67 RSVQVFLDACVKCGACTDKCHYFLGSSDPKNMPVARQDLFRSVYRRHFTFAGKYFPKLVG 126 Query: 211 QGERLDNLEDP--FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E D++ D ++C C+ CP G++ A+ + +L Sbjct: 127 AKELDDDMLDDWYNYFHQCSQCRRCSVFCPYGIDTAEISMAAREVL 172 >gi|154149180|ref|YP_001406569.1| hypothetical protein CHAB381_1008 [Campylobacter hominis ATCC BAA-381] gi|153805189|gb|ABS52196.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381] Length = 338 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 13/141 (9%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 + + R++R++ + Y+ +N L LL DP G Sbjct: 1 MLDIRLFRFDSNIDFTSYYKPYF--YENFDFNTLRALLNDIKSDDPYFEFD--------G 50 Query: 87 SCGMNIDGTNTLACVKDM---KDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143 I+ K ++ + + PL KDL F + + Sbjct: 51 VKFCKINDVVVSLDEKFDVILQNFGECLKIEPLSTYYAYKDLKFSTEEFDKKFEIFSAFN 110 Query: 144 KTVSPKPAKELLQSHEDRQKI 164 S L D QK Sbjct: 111 YEKSYYDTLISLSYASDMQKY 131 >gi|77166015|ref|YP_344540.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|254436315|ref|ZP_05049821.1| NADH-quinone oxidoreductase, chain I subfamily [Nitrosococcus oceani AFC27] gi|115502512|sp|Q3J836|NUOI2_NITOC RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|76884329|gb|ABA59010.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|207088005|gb|EDZ65278.1| NADH-quinone oxidoreductase, chain I subfamily [Nitrosococcus oceani AFC27] Length = 162 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 23/119 (19%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + H R+ +G C+ C C CP+ D Sbjct: 26 YLFTKKVTVQFPEERTPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSEQR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R+ ID L++C C +SCP +I + + Sbjct: 86 EDGTRRTTRYDID------------------LFKCIYCGFCEESCPV-----DSIVETR 121 >gi|42779733|ref|NP_976980.1| molybdopterin oxidoreductase family protein [Bacillus cereus ATCC 10987] gi|42735650|gb|AAS39588.1| molybdopterin oxidoreductase family protein [Bacillus cereus ATCC 10987] Length = 978 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKECSTSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|83313465|ref|YP_423729.1| polyferredoxin [Magnetospirillum magneticum AMB-1] gi|82948306|dbj|BAE53170.1| Polyferredoxin [Magnetospirillum magneticum AMB-1] Length = 485 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 5/79 (6%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 L C CP + S + ++++ W + R + E Sbjct: 216 LAGYAREQVCLYMCPYSRFQSAMFDEHSLIITYEEWRGEPRKPIRKS-----ETFEGRGH 270 Query: 227 CHTIMNCTQSCPKGLNPAK 245 C C +CP G++ Sbjct: 271 CIDCKMCVTACPTGIDIRD 289 >gi|313498521|gb|ADR59887.1| Iron-sulfur cluster-binding protein [Pseudomonas putida BIRD-1] Length = 467 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIM 231 A C CP Y L AY D R E +G R + L C Sbjct: 216 AVCLHMCP-YARFQSVMFDKDTLAVAY----DPRRGEARGPRKKGSDVGAQGLGDCIDCT 270 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 271 LCVQVCPTGIDIRD 284 >gi|255036836|ref|YP_003087457.1| D-lactate dehydrogenase (cytochrome) [Dyadobacter fermentans DSM 18053] gi|254949592|gb|ACT94292.1| D-lactate dehydrogenase (cytochrome) [Dyadobacter fermentans DSM 18053] Length = 991 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 9/110 (8%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSDRYLGPAIL 196 + P + D+ + +C C T CPS+ + Sbjct: 556 EADQQTPEFKTNFRFHDQNILQHAEQCNGSGDCRKTHLSGGTMCPSFMATRNEKDTTRAR 615 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R ++ + R DN E C C CP ++ AK Sbjct: 616 ANILREML--TRSPKENRFDNKEIKEVYDLCLACKGCKGECPSNVDVAKL 663 >gi|220922721|ref|YP_002498023.1| FAD linked oxidase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947328|gb|ACL57720.1| FAD linked oxidase domain protein [Methylobacterium nodulans ORS 2060] Length = 974 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 11/93 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY R + + E L E Sbjct: 554 EMCNNNGTCRALAGGTMCPSYRVTRSEEHLTRGRANTLRLALSGQ--LGPEALTAPETKR 611 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C + C + CP G++ +A++++ +L Sbjct: 612 ALDLCVSCKGCRRECPTGVD----MARMRIEVL 640 >gi|26990255|ref|NP_745680.1| iron-sulfur cluster-binding protein [Pseudomonas putida KT2440] gi|24985203|gb|AAN69144.1|AE016548_3 iron-sulfur cluster-binding protein [Pseudomonas putida KT2440] Length = 467 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIM 231 A C CP Y L AY D R E +G R + L C Sbjct: 216 AVCLHMCP-YARFQSVMFDKDTLAVAY----DPRRGEARGPRKKGSDVGAQGLGDCIDCT 270 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 271 LCVQVCPTGIDIRD 284 >gi|148547452|ref|YP_001267554.1| cytochrome c oxidase cbb3 type, accessory protein FixG [Pseudomonas putida F1] gi|148511510|gb|ABQ78370.1| Cytochrome c oxidase cbb3 type, accessory protein FixG [Pseudomonas putida F1] Length = 467 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIM 231 A C CP Y L AY D R E +G R + L C Sbjct: 216 AVCLHMCP-YARFQSVMFDKDTLAVAY----DPRRGEARGPRKKGSDVGAQGLGDCIDCT 270 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 271 LCVQVCPTGIDIRD 284 >gi|95931277|ref|ZP_01313995.1| protein of unknown function DUF224, cysteine-rich region [Desulfuromonas acetoxidans DSM 684] gi|95132671|gb|EAT14352.1| protein of unknown function DUF224, cysteine-rich region [Desulfuromonas acetoxidans DSM 684] Length = 602 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 29/100 (29%), Gaps = 18/100 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 +S + R + C C C C RY PA + Q Y DS+ Sbjct: 7 RSPDHRDLAVLVDGCSDCGACLRQC----AFLKRYGSPAAIQQLY--EQDSQQGKLA--- 57 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C C CP L + ++ + Sbjct: 58 ---------FSCSLCGLCNVVCPAELPLDQYFLSMRRHYI 88 >gi|269468155|gb|EEZ79857.1| polyferredoxin [uncultured SUP05 cluster bacterium] Length = 465 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 5/83 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + L+ Y + R E +G+ L E Sbjct: 200 ASGAYIFAGHMREQSCLWVCP-YAGIQGAMVDKQTLMPTYDYY---RGEKRGK-LKKGEF 254 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 255 VDGFGDCIDCNQCVAVCPTGVDI 277 >gi|251773159|gb|EES53712.1| NADH dehydrogenase, chain I [Leptospirillum ferrodiazotrophum] Length = 182 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 28/105 (26%), Gaps = 16/105 (15%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + A R+ DG+ CV C C CP+ Sbjct: 27 MKKVTSQYPKEKLVLADGYRGFIAHRRYDDGVERCVGCDLCEAICPA------------- 73 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +A R + D E R RC C +CP Sbjct: 74 --KAIRVVSDIHPEVPDRRYAKEYTLD-FTRCIFCGFCVVACPVN 115 >gi|222056802|ref|YP_002539164.1| heterodisulfide reductase subunit [Geobacter sp. FRC-32] gi|221566091|gb|ACM22063.1| heterodisulfide reductase subunit [Geobacter sp. FRC-32] Length = 194 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 17/117 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAIL 196 ++ +S + + + C C CS CP S+ + + + Sbjct: 1 MKRKKMLLSNETMNIGFVDKVEALSGTSVRRCFQCGKCSAGCPMASFMEHPPNRVVRLLQ 60 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L + ++ R ++ C + C CP +N A + ++ + Sbjct: 61 LGQWERILAGR---------------SIWYCASCETCATRCPNKVNLAAIMDALRKL 102 >gi|218262923|ref|ZP_03477230.1| hypothetical protein PRABACTJOHN_02910 [Parabacteroides johnsonii DSM 18315] gi|218223065|gb|EEC95715.1| hypothetical protein PRABACTJOHN_02910 [Parabacteroides johnsonii DSM 18315] Length = 443 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 18/101 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ + +C+ CA C CP L PA L++ + +D + E Sbjct: 353 LLLTKEESVRKPMQDCIRCAKCVNVCPM-------GLNPAFLMKFTVY----KDWEKAE- 400 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C+ +CP I K ++ Sbjct: 401 ------ANYIQDCIECGSCSYTCPANRPLLDQIRLGKGKVM 435 >gi|188585178|ref|YP_001916723.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349865|gb|ACB84135.1| electron transport complex, RnfABCDGE type, C subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 438 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 19/105 (18%) Query: 155 LQSHEDRQKIDGLYE-CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L ED Y CV C C CP + + + +G + Y + E Sbjct: 347 LLFPEDMTWDYTDYNECVRCGKCVERCPVHLYPNK--IGMYAEHKQY---------SKAE 395 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D ++ C C CP I ++K + R+ Sbjct: 396 EWDIMD-------CGECGTCVYFCPANRPILMWIQQVKPTVKRRQ 433 >gi|154495029|ref|ZP_02034034.1| hypothetical protein PARMER_04075 [Parabacteroides merdae ATCC 43184] gi|154085579|gb|EDN84624.1| hypothetical protein PARMER_04075 [Parabacteroides merdae ATCC 43184] Length = 443 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 18/101 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ + +C+ CA C CP L PA L++ + +D + E Sbjct: 353 LLLTKEESVRKPMQDCIRCAKCVNVCPM-------GLNPAFLMKFTVY----KDWEKAE- 400 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C+ +CP I K ++ Sbjct: 401 ------ANYIQDCIECGSCSYTCPANRPLLDQIRLGKGKVM 435 >gi|291287451|ref|YP_003504267.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884611|gb|ADD68311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 404 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 L DP Y+C C +CP G++ Sbjct: 190 LIIAMDPETSYKCVKCQACVNTCPVGIDI 218 >gi|288926954|ref|ZP_06420851.1| electron transport complex, RnfABCDGE type, C subunit [Prevotella buccae D17] gi|288336274|gb|EFC74658.1| electron transport complex, RnfABCDGE type, C subunit [Prevotella buccae D17] Length = 464 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 18/97 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ CA C CP L P +L ERL+ Sbjct: 362 ESDARRKPVQPCIRCAKCVQVCPM-------GLEPYLLATLSSLKEH-------ERLEA- 406 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C +CP I + K ++ Sbjct: 407 ---EDVVSCIACGSCQFTCPAHRPLLDNILQGKGAVM 440 >gi|261820252|ref|YP_003258358.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pectobacterium wasabiae WPP163] gi|261604265|gb|ACX86751.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pectobacterium wasabiae WPP163] Length = 1177 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + + C C C +CP + + + P + A L S Sbjct: 666 PTGTTKWEKRNIAEEIPLWQPQLCTQCNHCVAACP-HSAIRAKVVQPDAMENAPASL-QS 723 Query: 207 RD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + R C C + CP Sbjct: 724 LDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|254779809|ref|YP_003057915.1| NADH dehydrogenase subunit G [Helicobacter pylori B38] gi|254001721|emb|CAX29952.1| NADH-ubiquinone oxidoreductase, NQO3 subunit [Helicobacter pylori B38] Length = 853 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 40/215 (18%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRIYSCNTKAKNNAVILT 72 Query: 113 VYP---------LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED--- 160 P + V L + + + T + + Sbjct: 73 NTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDF 132 Query: 161 -RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+MC C T+C ++ L+A + + + D+F+ + Sbjct: 133 WAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---SMSK 181 Query: 220 DPFRLYR--------------CHTIMNCTQSCPKG 240 D F ++ C+ C CP G Sbjct: 182 DAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|253687099|ref|YP_003016289.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753677|gb|ACT11753.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 1177 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + + C C C +CP + + + P + A L S Sbjct: 666 PTGTTKWEKRNIAEEIPLWQPQLCTQCNHCVAACP-HSAIRAKVVQPDAMENAPASL-QS 723 Query: 207 RD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + R C C + CP Sbjct: 724 LDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|227326333|ref|ZP_03830357.1| pyruvate-flavodoxin oxidoreductase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 1177 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + + C C C +CP + + + P + A L S Sbjct: 666 PTGTTKWEKRNIAEEIPLWQPQLCTQCNHCVAACP-HSAIRAKVVQPDAMENAPASL-QS 723 Query: 207 RD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + R C C + CP Sbjct: 724 LDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|254517630|ref|ZP_05129686.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] gi|226911379|gb|EEH96580.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] Length = 496 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 22/102 (21%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--RDEFQGERLDNLEDP 221 C C C +CP Y A +++ + + + D Q +R +++ Sbjct: 136 YINQELCKECGMCKKACP--------YDAIAEVMRPCKRVCPTGALDINQDDRRAMIKEE 187 Query: 222 FRLYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 C +C +CP G + AK +A+ + M Sbjct: 188 ----TCVNCGSCMSACPFGAISDKSLIVPIAKRLARGRKMYA 225 >gi|167646403|ref|YP_001684066.1| cytochrome c oxidase accessory protein CcoG [Caulobacter sp. K31] gi|167348833|gb|ABZ71568.1| cytochrome c oxidase accessory protein CcoG [Caulobacter sp. K31] Length = 501 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ CP ++ + R + R + + Sbjct: 227 YVFAGWMREQVCTYMCPWPRIQGAMLDQHSLQVTYLRDRGEPRGAHKKG-----QPWEGR 281 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 282 GDCIDCHQCVVVCPMGIDIRD 302 >gi|50119767|ref|YP_048934.1| pyruvate-flavodoxin oxidoreductase [Pectobacterium atrosepticum SCRI1043] gi|49610293|emb|CAG73737.1| pyruvate-flavodoxin oxidoreductase [Pectobacterium atrosepticum SCRI1043] Length = 1177 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + + C C C +CP + + + P + A L S Sbjct: 666 PTGTTKWEKRNIAEEIPLWQPQLCTQCNHCVAACP-HSAIRAKVVQPDAMENAPASL-QS 723 Query: 207 RD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + R C C + CP Sbjct: 724 LDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|315453245|ref|YP_004073515.1| NADH-quinone oxidoreductase subunit I [Helicobacter felis ATCC 49179] gi|315132297|emb|CBY82925.1| NADH-quinone oxidoreductase subunit I [Helicobacter felis ATCC 49179] Length = 207 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S+ +I + V P + H R G C+ C C Sbjct: 26 GLELFKGLGLTIKEFFSKEVTIH-YPMEVLPLSPRYRAVHHLQRLLESGNERCIGCGLCE 84 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + ER L RC C + C Sbjct: 85 KICTSNCI---------------RIITH---KGEDERKHIDSYTINLGRCIYCGLCAEVC 126 Query: 238 P 238 P Sbjct: 127 P 127 >gi|313109574|ref|ZP_07795526.1| putative iron-sulfur protein [Pseudomonas aeruginosa 39016] gi|310882028|gb|EFQ40622.1| putative iron-sulfur protein [Pseudomonas aeruginosa 39016] Length = 476 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 228 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 284 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 285 VCPTGIDIRD 294 >gi|296387311|ref|ZP_06876810.1| iron-sulfur protein [Pseudomonas aeruginosa PAb1] Length = 476 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 228 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 284 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 285 VCPTGIDIRD 294 >gi|325675133|ref|ZP_08154819.1| oxidoreductase [Rhodococcus equi ATCC 33707] gi|325554094|gb|EGD23770.1| oxidoreductase [Rhodococcus equi ATCC 33707] Length = 935 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 +D ++ C C CPSY + + + +++ Sbjct: 522 RDDDGDFAQAVHRCTGVGKCRADTTGAGGVMCPSYLATREEKDSTRGRARVLQEMVNGSL 581 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C CP G++ Sbjct: 582 VRDGWRSAEVHDA--LDLCLSCKGCASDCPTGVD 613 >gi|222109383|ref|YP_002551647.1| cytochrome c oxidase accessory protein ccog [Acidovorax ebreus TPSY] gi|221728827|gb|ACM31647.1| cytochrome c oxidase accessory protein CcoG [Acidovorax ebreus TPSY] Length = 470 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 7/81 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF- 222 G + C CP + S + +++ D+ R E + R ++ Sbjct: 206 YGFAGYMREQVCKYMCPYARFQSAMFDKDTLIVTY-----DTQRGEPRAARSKKVDAKAA 260 Query: 223 RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 261 GLGDCIDCSLCVQVCPTGIDI 281 >gi|153953484|ref|YP_001394249.1| RnfC related NADH dehydrogenase [Clostridium kluyveri DSM 555] gi|153953488|ref|YP_001394253.1| RnfC related NADH dehydrogenase [Clostridium kluyveri DSM 555] gi|219854106|ref|YP_002471228.1| hypothetical protein CKR_0763 [Clostridium kluyveri NBRC 12016] gi|146346365|gb|EDK32901.1| RnfC related NADH dehydrogenase [Clostridium kluyveri DSM 555] gi|146346369|gb|EDK32905.1| RnfC related NADH dehydrogenase [Clostridium kluyveri DSM 555] gi|219567830|dbj|BAH05814.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 441 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 15/101 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C+ CP + P + R + E + + Sbjct: 245 DHMINKAKSSCIQCHYCTDMCPRFLIG-----HPLHPHKVMRGIA--LAEGNEALKEAII 297 Query: 220 DPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL+P + A +K ++ + I Sbjct: 298 -------CCQCGVCEMFACPMGLSPRRMNAYVKAQMMAKGI 331 >gi|116072793|ref|ZP_01470059.1| putative oxidoreductase, aldo/keto reductase family protein [Synechococcus sp. BL107] gi|116064680|gb|EAU70440.1| putative oxidoreductase, aldo/keto reductase family protein [Synechococcus sp. BL107] Length = 373 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 41/130 (31%), Gaps = 16/130 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 + + L+ + +L Q H +R D +C C C P P Sbjct: 247 AHLAQADGPLQQQETEVLHQLEQRHRERLGNDLCGQCRACLPCPNQVPI----------P 296 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR------CHTIMNCTQSCPKGLNPAKAI 247 +L L E+ ER + + + C + C CP GLN K + Sbjct: 297 NLLRLRNLTLGHDLIEYSQERYNLIGRAGHWWDTIDASACESCGECLPRCPHGLNIPKLL 356 Query: 248 AKIKMMLLDR 257 A L+ Sbjct: 357 ADTHTRLVAA 366 >gi|116052165|ref|YP_788991.1| putative iron-sulfur cluster-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218889584|ref|YP_002438448.1| putative iron-sulfur protein [Pseudomonas aeruginosa LESB58] gi|254237016|ref|ZP_04930339.1| hypothetical protein PACG_03044 [Pseudomonas aeruginosa C3719] gi|254242816|ref|ZP_04936138.1| hypothetical protein PA2G_03582 [Pseudomonas aeruginosa 2192] gi|115587386|gb|ABJ13401.1| putative iron-sulfur cluster-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126168947|gb|EAZ54458.1| hypothetical protein PACG_03044 [Pseudomonas aeruginosa C3719] gi|126196194|gb|EAZ60257.1| hypothetical protein PA2G_03582 [Pseudomonas aeruginosa 2192] gi|218769807|emb|CAW25567.1| probable iron-sulfur protein [Pseudomonas aeruginosa LESB58] Length = 573 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 325 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 381 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 382 VCPTGIDIRD 391 >gi|121592579|ref|YP_984475.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|120604659|gb|ABM40399.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] Length = 470 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 7/81 (8%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF- 222 G + C CP + S + +++ D+ R E + R ++ Sbjct: 206 YGFAGYMREQVCKYMCPYARFQSAMFDKDTLIVTY-----DTQRGEPRAARSKKVDAKAA 260 Query: 223 RLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 261 GLGDCIDCSLCVQVCPTGIDI 281 >gi|152986699|ref|YP_001346346.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas aeruginosa PA7] gi|150961857|gb|ABR83882.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas aeruginosa PA7] Length = 476 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 228 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 284 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 285 VCPTGIDIRD 294 >gi|15599326|ref|NP_252820.1| iron-sulfur protein [Pseudomonas aeruginosa PAO1] gi|9950335|gb|AAG07518.1|AE004829_8 probable iron-sulfur protein [Pseudomonas aeruginosa PAO1] Length = 573 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 325 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 381 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 382 VCPTGIDIRD 391 >gi|114330933|ref|YP_747155.1| NADH dehydrogenase subunit I [Nitrosomonas eutropha C91] gi|122314151|sp|Q0AHJ2|NUOI_NITEC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|114307947|gb|ABI59190.1| NADH dehydrogenase subunit I [Nitrosomonas eutropha C91] Length = 162 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 25/133 (18%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 ++K + V + ++ + + H R+ +G C+ C C Sbjct: 14 FELLKGMKVTGRYLFAP--KVTVHYPEEKTPQSPRFRGLHALRRYPNGEERCIACKLCEA 71 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID L +C C ++CP Sbjct: 72 VCPALAITIESEQRDDGTRRTTRYDID------------------LIKCIFCGFCEEACP 113 Query: 239 KGLNPAKAIAKIK 251 AI + + Sbjct: 114 V-----DAIVETR 121 >gi|107103648|ref|ZP_01367566.1| hypothetical protein PaerPA_01004718 [Pseudomonas aeruginosa PACS2] Length = 476 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ +SR + + L C C Q Sbjct: 228 CIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQ---GLGDCIDCQQCVQ 284 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 285 VCPTGIDIRD 294 >gi|315657442|ref|ZP_07910324.1| D-lactate dehydrogenase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491914|gb|EFU81523.1| D-lactate dehydrogenase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 981 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 17/106 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYWWNSDRYLGPAILLQA 199 P + +D+ ++ C C CPSY + Sbjct: 508 PALPGQGFTFPKDKDFTAAVHRCTGVGKCLAMNQVKNAWMCPSYLATGQEKDATRGRARV 567 Query: 200 YRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLN 242 + + + + N DP L C C+ +CP G++ Sbjct: 568 LQEVTNG------TLIKNFRDPNLLRALDLCLACKACSTACPTGID 607 >gi|307718326|ref|YP_003873858.1| hypothetical protein STHERM_c06260 [Spirochaeta thermophila DSM 6192] gi|306532051|gb|ADN01585.1| hypothetical protein STHERM_c06260 [Spirochaeta thermophila DSM 6192] Length = 596 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 57/206 (27%), Gaps = 31/206 (15%) Query: 51 DLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACVKDMKDIK 108 L+ +L + PTL S R GICG C + ++G +C+ +++ Sbjct: 16 PLEVEEGTLLVDAASRADVEIPTLCYHEDLSPR-GICGICLVKVNGEYVRSCITRVREGM 74 Query: 109 GAIAVYPLPHMSVIK-----------DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 + P+ + K D + + H + + + L+ S K Sbjct: 75 EVVTSDPVIRETRRKILELILATHPDDCLKCIKHGKCELQDLAERLEVRSIPYDKYERGL 134 Query: 158 HEDRQKI---DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 DR + +C+ C C C + Sbjct: 135 PVDRTSPSIVRDMNKCIGCGRCIEVCHHVQSVGAIFFHNRGSHTI--------------V 180 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKG 240 + C C CP G Sbjct: 181 ANAAGQTMGTSVCVACGQCVVYCPVG 206 >gi|304390180|ref|ZP_07372134.1| D-lactate dehydrogenase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326662|gb|EFL93906.1| D-lactate dehydrogenase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 981 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 17/106 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYWWNSDRYLGPAILLQA 199 P + +D+ ++ C C CPSY + Sbjct: 508 PALPGQGFTFPKDKDFTAAVHRCTGVGKCLAMNQVKNAWMCPSYLATGQEKDATRGRARV 567 Query: 200 YRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLN 242 + + + + N DP L C C+ +CP G++ Sbjct: 568 LQEVTNG------TLIKNFRDPNLLRALDLCLACKACSTACPTGID 607 >gi|298346061|ref|YP_003718748.1| FAD linked oxidase domain-containing protein [Mobiluncus curtisii ATCC 43063] gi|298236122|gb|ADI67254.1| FAD linked oxidase domain protein [Mobiluncus curtisii ATCC 43063] Length = 981 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 17/106 (16%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTS--------CPSYWWNSDRYLGPAILLQA 199 P + +D+ ++ C C CPSY + Sbjct: 508 PALPGQGFTFPKDKDFTAAVHRCTGVGKCLAMNQVKNAWMCPSYLATGQEKDATRGRARV 567 Query: 200 YRWLIDSRDEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLN 242 + + + + N DP L C C+ +CP G++ Sbjct: 568 LQEVTNG------TLIKNFRDPNLLRALDLCLACKACSTACPTGID 607 >gi|212636696|ref|YP_002313221.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212558180|gb|ACJ30634.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 477 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + S + + SR E +G R E Sbjct: 217 AICTYLNAGWMREQMCLHCCPYARFQSVMFDANTKTVTYDA----SRGESRGPRKRKQET 272 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 273 D--LGDCVDCNLCVDVCPTGIDI 293 >gi|169830328|ref|YP_001716310.1| molybdopterin oxidoreductase [Candidatus Desulforudis audaxviator MP104C] gi|169637172|gb|ACA58678.1| molybdopterin oxidoreductase [Candidatus Desulforudis audaxviator MP104C] Length = 998 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 42/176 (23%), Gaps = 33/176 (18%) Query: 83 GICGSCGMNIDGTNTLACVKDMKDIKGAIAVYP-LPHMS----------VIKDLVVDMSH 131 G+C C + DG AC + D P L D + + Sbjct: 48 GLCRVCMVEADGKMVAACRTPVADGMKVATGSPNLDQYRRYIVGVILAEHESDCLTCGKN 107 Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY------ECVMCACCSTSCPSY-W 184 + + + + K + + +C++C C +C Sbjct: 108 LNCKLQEVARYANLEPTKFKELRPVKPGKPLDDTHPWIVRNHNKCILCGICVRTCREIAQ 167 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 N+ + + E C + C CP G Sbjct: 168 VNAIDFAFRGRATTISTFGNKPLHES---------------NCVSCGECVARCPVG 208 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 44/184 (23%), Gaps = 29/184 (15%) Query: 72 PTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL----PHMSVIK--- 123 P L G C C + IDG +C ++ P +V + Sbjct: 285 PFLCFHPELTGSGGCRVCAVEIDGKVVPSCTTRAREGMVVRTSSPQAREAQAAAVKRILA 344 Query: 124 ----DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL---YECVMCACC 176 D + + + + + + + D + CV C C Sbjct: 345 GHNGDCLNCAKNGRCKLQEVVGYTGVYQEMAGTPAPFAEVDESNPYFVLDRSRCVACGIC 404 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 +C + L R + + C + C Sbjct: 405 LRTCRQ--------------VNGADALEFKRVDNHRVVVPRQGGSLAESACESCGECVAR 450 Query: 237 CPKG 240 CP G Sbjct: 451 CPVG 454 >gi|167762909|ref|ZP_02435036.1| hypothetical protein BACSTE_01273 [Bacteroides stercoris ATCC 43183] gi|167699249|gb|EDS15828.1| hypothetical protein BACSTE_01273 [Bacteroides stercoris ATCC 43183] Length = 445 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 26/97 (26%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C ++CP + YL + A+ ER++ + C Sbjct: 367 PCIRCAKCVSACP---MGLEPYL--LATVSAH---------GDFERVE----KEDVMSCI 408 Query: 229 TIMNCTQSCPKGLNPAKAI--------AKIKMMLLDR 257 +C +CP I A I+ + + Sbjct: 409 ECGSCQFTCPSNRPLLDYIRLGKGKVGAMIRARQVKK 445 >gi|124028231|ref|YP_001013551.1| polyferredoxin [Hyperthermus butylicus DSM 5456] gi|123978925|gb|ABM81206.1| Polyferredoxin [Hyperthermus butylicus DSM 5456] Length = 309 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 26/112 (23%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR 189 H + R ++ + + + K+ +C C CS CP Sbjct: 211 EHVFGVKRLWCRYICPIGNLYGYVMNRYSPLVLKVRHADQCRGCMLCSMVCPM------- 263 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + +++ + RD YRC C + CP G+ Sbjct: 264 ------GIDVAKYVGEGRDVRD-------------YRCFHCGRCAEVCPWGV 296 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIK 251 C M C+ CP G++ AK + + + Sbjct: 251 CRGCMLCSMVCPMGIDVAKYVGEGR 275 >gi|78224618|ref|YP_386365.1| heterodisulfide reductase subunit [Geobacter metallireducens GS-15] gi|78195873|gb|ABB33640.1| Heterodisulfide reductase subunit [Geobacter metallireducens GS-15] Length = 305 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 22/96 (22%), Gaps = 9/96 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C CP + L QA + Sbjct: 187 FWKEHFARCIRCYACRQVCPFCYCEQC--LCDRNRPQAVETTPRP---AGNMAWHIVRAM 241 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + + + Sbjct: 242 HLAGRCAGCAECERACPMDIPL----NLLNRKMAKE 273 >gi|333029674|ref|ZP_08457735.1| D-lactate dehydrogenase (cytochrome) [Bacteroides coprosuis DSM 18011] gi|332740271|gb|EGJ70753.1| D-lactate dehydrogenase (cytochrome) [Bacteroides coprosuis DSM 18011] Length = 942 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 5/138 (3%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 V+K + ++ + P + + +C+ C Sbjct: 492 EKAFMVMKQIKELFDPN-----NMLNPGVIFNDDPKCHIKNFKPLPLTHPIVDKCIECGF 546 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +C + + I + R ++ D + L C C+ Sbjct: 547 CEINCLTCGFTLSSRQRIVIQREISRLERENSDPERVNLLKKQYKYLGEQTCAGDGLCST 606 Query: 236 SCPKGLNPAKAIAKIKMM 253 SCP +N ++ M Sbjct: 607 SCPMKINVGDLTHVLREM 624 >gi|312136752|ref|YP_004004089.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanothermus fervidus DSM 2088] gi|311224471|gb|ADP77327.1| acetyl-CoA decarbonylase/synthase alpha subunit [Methanothermus fervidus DSM 2088] Length = 774 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 18/99 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 ++++ I+ +C+ C C +CP+ P ++D+ L L Sbjct: 390 DEKEIIEKAKKCIKCGLCDKACPNN--------FP---------VMDAIVSASKGDLSKL 432 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 E + C+T C Q C + L I K + + Sbjct: 433 E-KLCIELCYTCGRCEQVCKRNLPIVSMITKAGERFVKK 470 >gi|290967901|ref|ZP_06559451.1| electron transport complex, RnfABCDGE type, C subunit [Megasphaera genomosp. type_1 str. 28L] gi|290782040|gb|EFD94618.1| electron transport complex, RnfABCDGE type, C subunit [Megasphaera genomosp. type_1 str. 28L] Length = 446 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 18/78 (23%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C +CP S + SR+ + R + + C Sbjct: 365 EPCIRCGRCVDACPMGLVPSQLSIFS------------SREAWDECR------GYGVMNC 406 Query: 228 HTIMNCTQSCPKGLNPAK 245 +C CP N + Sbjct: 407 VECGSCVYVCPAKRNLVQ 424 >gi|257094107|ref|YP_003167748.1| cytochrome c oxidase accessory protein CcoG [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046631|gb|ACV35819.1| cytochrome c oxidase accessory protein CcoG [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 471 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 7/85 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 + + + C CP Y P L+ +Y D R E +G R Sbjct: 203 AAFLYLMAGFMREQVCKYMCP-YARFQGVMFDPDTLIISY----DPERGEPRGLRRKGAT 257 Query: 220 DP-FRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 258 PKTEALGDCVDCSICVQVCPTGIDI 282 >gi|297563975|ref|YP_003682948.1| NADH-quinone oxidoreductase, chain I [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848424|gb|ADH70442.1| NADH-quinone oxidoreductase, chain I [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 185 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 14/123 (11%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L ++ +K V + + ++E V A H+ + DGL +C+ C Sbjct: 2 LEWLNPVKGFGVTFHTMFKKVPTVEY--PEVKRPTAPRFHGRHQLNRWADGLEKCIGCEL 59 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C+ +CP+ + D GER + L RC C + Sbjct: 60 CAWACPADAIYVEAGDNT-----------DDDRYSPGERYGRVYQINYL-RCILCGLCVE 107 Query: 236 SCP 238 +CP Sbjct: 108 ACP 110 >gi|183983397|ref|YP_001851688.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Mycobacterium marinum M] gi|183176723|gb|ACC41833.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Mycobacterium marinum M] Length = 1193 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 25/93 (26%), Gaps = 8/93 (8%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE--FQGERLDN 217 D + C+ C CS CP + Y + + D R Sbjct: 682 DLVAVWDPDTCIQCGNCSFVCPHSVIRTTLYPRDRLDAAPATFASAPLDAVGLPDTRYTL 741 Query: 218 LEDPFRLYRCHTIMNCTQSCPK---GLNPAKAI 247 C C ++CP G KAI Sbjct: 742 QVYAE---DCTGCNLCVEACPAVVPGKPVTKAI 771 >gi|153874620|ref|ZP_02002769.1| NADH-quinone oxidoreductase, chain I [Beggiatoa sp. PS] gi|152068913|gb|EDN67228.1| NADH-quinone oxidoreductase, chain I [Beggiatoa sp. PS] Length = 150 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 18 RKITIQYPEEKTPMSHRFRGHHALRRYPNGEERCIACKLCEAVCPALAITIEAAPREDGT 77 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 78 RRTTRYDID------------------LTKCIFCGYCEESCPVD 103 >gi|124485878|ref|YP_001030494.1| hypothetical protein Mlab_1058 [Methanocorpusculum labreanum Z] gi|124363419|gb|ABN07227.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocorpusculum labreanum Z] Length = 412 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 10/110 (9%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDR--QKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + ++ + + K L ++R + + C+ C C +CP + L Sbjct: 255 KIENVMVKMGKKTQKSQFSALGDGKERLTKIMQSSSRCIACRACIDNCPICYCVECSTLK 314 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 P L+D + C C + CP + Sbjct: 315 PH--------LVDQTQTPPDFMFHLIRFAHIADSCVNCGQCQELCPAEIP 356 >gi|89055049|ref|YP_510500.1| formate dehydrogenase, alpha subunit [Jannaschia sp. CCS1] gi|88864598|gb|ABD55475.1| formate dehydrogenase alpha subunit [Jannaschia sp. CCS1] Length = 973 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 13/94 (13%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + + + +C+ C+ C +C + G L R Sbjct: 160 KGDQPNPEWIPKDDSNPYFTYDPAKCIACSRCVRAC-------EEVQGTFALTMEGR-GF 211 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR G D L C + C Q+CP Sbjct: 212 DSRISAGGPDSDFLTSD-----CVSCGACVQACP 240 >gi|256810604|ref|YP_003127973.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus fervens AG86] gi|256793804|gb|ACV24473.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus fervens AG86] Length = 379 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 26/214 (12%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC-VKDM 104 D ++D ++ K L + R C C + I +AC Sbjct: 145 DVVKEEIDKGKFIIFLKDGTEKAVKIDDLEEKGFGRRENCQRCEVMIPRMADIACGNWGA 204 Query: 105 KDIKGAIAVYPLPHMSVIKD--------LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQ 156 + + + +I++ + IE + ++ K K+ L+ Sbjct: 205 EKGWTFVEICSEKGRKLIEEAEKNGYLKIKEPSEKAIQIREKIENVMIKLAKKFQKKHLE 264 Query: 157 SHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDR----YLGPAILLQAYRWLIDSRDEF 210 + Y C+ C C +CP + + Y+G + + Sbjct: 265 EEYPSLEKWQKYWNRCIKCYGCRDNCPLCFCVECKLEKDYIGEKGKIPPDPIMFQG---- 320 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 + C C +CP + A Sbjct: 321 -------IRLSHTSQSCINCGQCEDACPMEIPLA 347 >gi|218780860|ref|YP_002432178.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762244|gb|ACL04710.1| Putative uncharacterized Fe-S oxidoreductase (contains cysteine-rich region domain) [Desulfatibacillum alkenivorans AK-01] Length = 376 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 17/80 (21%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C CP + + R L E L+ C Sbjct: 20 CINCGICLQKCPVMQMGKEE-----SKAEIKRLLN---GEPPERVLNE---------CTF 62 Query: 230 IMNCTQSCPKGLNPAKAIAK 249 M C CP+ L P I + Sbjct: 63 CMTCNHYCPQELKPYALIME 82 >gi|56478184|ref|YP_159773.1| NADH dehydrogenase subunit I [Aromatoleum aromaticum EbN1] gi|81356980|sp|Q5P1E2|NUOI_AZOSE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|56314227|emb|CAI08872.1| NADH dehydrogenase I , chain I [Aromatoleum aromaticum EbN1] Length = 161 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 29 RKITVQFPEEKTPASPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESEQRDDGS 88 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C ++CP Sbjct: 89 RRTKRYDID------------------LTKCIFCGFCEEACPVD 114 >gi|23016508|ref|ZP_00056263.1| COG0348: Polyferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 481 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 10/115 (8%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 + Q + I + +L L C CP + S Sbjct: 181 FGDAFQQLKDIFTLEASPPTYVFIAILGGFC-----FLLAGYARERVCVYLCPYSRFQSA 235 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + ++++ W + + + C +C Q+CP G++ Sbjct: 236 MFDEHSLIVTYEAWRGEPGGAARKG-----QSFEGRGHCVDCRSCVQACPTGIDI 285 >gi|314965050|gb|EFT09149.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL082PA2] gi|315093910|gb|EFT65886.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL060PA1] gi|327325778|gb|EGE67570.1| NADH-quinone oxidoreductase, I subunit [Propionibacterium acnes HL103PA1] Length = 199 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + + K + H+ + DGL +CV C C+ Sbjct: 1 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW 60 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQ 235 +CP+ + D+ DE + GER + + L RC C + Sbjct: 61 ACPADAIYVEG--------------ADNTDEERYSPGERYGRVYEINYL-RCILCGMCIE 105 Query: 236 SCP 238 +CP Sbjct: 106 ACP 108 >gi|242277958|ref|YP_002990087.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfovibrio salexigens DSM 2638] gi|242120852|gb|ACS78548.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfovibrio salexigens DSM 2638] Length = 441 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 65/213 (30%), Gaps = 30/213 (14%) Query: 48 YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDI 107 + V L G V L + +I + ++ G S + G T++ K + Sbjct: 149 FNVALAMDGKPVTHRYLTVAGEIKNPMVVKVP--VGTLVSDVLEFAGGPTISDYKVVDGG 206 Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 V P + V K L ++ + Sbjct: 207 PMMGRVLPDTNQPVTKT--------------TSGLLVLPPNHNVVAGKVMDPEKIRRITN 252 Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C+ C+ CP L P L++ + + + L C Sbjct: 253 TVCCQCSRCTDLCPRNLLGHS--LHPHKLMRVIANNELNTEAAKEALL-----------C 299 Query: 228 HTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 C + SCP ++P + A+IK +L+ ++ Sbjct: 300 SECGICEKFSCPMMISPREVNAQIKQILMKERV 332 >gi|118576900|ref|YP_876643.1| ferredoxin [Cenarchaeum symbiosum A] gi|118195421|gb|ABK78339.1| ferredoxin [Cenarchaeum symbiosum A] Length = 164 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Query: 168 YECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLID-SRDEFQGERLDNLE--DPF 222 C+ C +CP + W PA +A + D S + ER D + DP Sbjct: 70 DSCIADGACIEACPVQVFQWFRTEKDIPAG--KATDEVFDGSGSTVKSERKDYTDKADPI 127 Query: 223 RLYRCHTIMNCTQSCP 238 R + C M C CP Sbjct: 128 REHDCIWCMACVSVCP 143 >gi|91794283|ref|YP_563934.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella denitrificans OS217] gi|91716285|gb|ABE56211.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella denitrificans OS217] Length = 494 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 21/83 (25%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + G + +SR + Sbjct: 232 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDGSTKTVTYDAARGESRGPRKR------NQ 285 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 286 TTELGDCVDCNLCVDVCPTGIDI 308 >gi|85860894|ref|YP_463096.1| glutamate synthase (NADPH) [Syntrophus aciditrophicus SB] gi|85723985|gb|ABC78928.1| glutamate synthase (NADPH) [Syntrophus aciditrophicus SB] Length = 544 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%), Gaps = 7/93 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C +C C+ CP + + +Q + D Sbjct: 19 WLILWDKEKCALCGRCTAVCPVQAIEPAVFRKRVVSVQPGLAEKPGHLYSIYHGIRQKTD 78 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 P C C CP G AI ++ Sbjct: 79 PAHF--CIGCGMCDFVCPNG-----AIQPVRNE 104 >gi|317177964|dbj|BAJ55753.1| D-lactate dehydrogenase [Helicobacter pylori F16] Length = 946 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEYLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKEKVSHGHHEDQVLLDELLKESEYLSHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEYLDMCMECGFCERVCPSKDLSLTPRQRIVIHREIERLKEKV 582 >gi|315609146|ref|ZP_07884115.1| electron transport complex protein RnfC [Prevotella buccae ATCC 33574] gi|315249216|gb|EFU29236.1| electron transport complex protein RnfC [Prevotella buccae ATCC 33574] Length = 464 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 18/97 (18%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 E + + C+ CA C CP L P +L ERL+ Sbjct: 362 ESDARRKPVQPCIRCAKCVQVCPM-------GLEPYLLATLSSLKEH-------ERLEA- 406 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C +C +CP I + K ++ Sbjct: 407 ---EDVVSCIACGSCQFTCPAHRPLLDNILQGKGAVM 440 >gi|304382697|ref|ZP_07365189.1| Na(+)-translocating NADH-quinone reductase subunit A [Prevotella marshii DSM 16973] gi|304336148|gb|EFM02392.1| Na(+)-translocating NADH-quinone reductase subunit A [Prevotella marshii DSM 16973] Length = 452 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ CA C ++CP + YL + + +E+ + C Sbjct: 372 PCIRCAKCVSACP---MGLEPYLLATVSSLHL--------------WEKVENED-VTSCI 413 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +C +CP I K ++ Sbjct: 414 ECGSCQYTCPSHRPLLDNIRFGKSTVM 440 >gi|284042623|ref|YP_003392963.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] gi|283946844|gb|ADB49588.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] Length = 177 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 13/116 (11%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + L + + + + P + + R + L +CV C+ C+ +CP+ Sbjct: 33 RGLKTTFGRMLEK-PVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPA 91 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 I + A + R GER + + L RC C +CP Sbjct: 92 DC----------IRVVAAENTPEHRVSA-GERYAAVYEIN-LSRCIFCGYCEVACP 135 >gi|188587257|ref|YP_001918802.1| putative anaerobic sulfite reductase, A subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351944|gb|ACB86214.1| putative anaerobic sulfite reductase, A subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 359 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 21/132 (15%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-----DRYLGPA 194 E + + + +D + C+ C C+ CP+ + G Sbjct: 222 EQVEELSPEEVKDVMEDLFDDNIWDELALRCMGCGICTYYCPTCHCYDIQDFYRQNQGVR 281 Query: 195 ILLQAYRWLID---------SRDEFQGE-------RLDNLEDPFRLYRCHTIMNCTQSCP 238 D R + +L+ C C Q+CP Sbjct: 282 YRTWDSCMFSDYTNMAGGHNPRPQKADRIKNRFFHKLNYFVKKQGPIACVGCGRCAQNCP 341 Query: 239 KGLNPAKAIAKI 250 G++ + +I Sbjct: 342 VGISINTVLKRI 353 >gi|160897890|ref|YP_001563472.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] gi|160363474|gb|ABX35087.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] Length = 489 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 3/82 (3%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S + +++ +SR + L C Sbjct: 227 AGFLREQVCKHMCPYARFQSAMFDKDTLVVTYDTARGESRGPRHKGVDYRAQ---GLGDC 283 Query: 228 HTIMNCTQSCPKGLNPAKAIAK 249 C Q CP G++ + Sbjct: 284 IDCTLCVQVCPVGIDIRDGLQY 305 >gi|148225889|ref|NP_001087331.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus laevis] gi|51593201|gb|AAH78569.1| MGC85457 protein [Xenopus laevis] Length = 207 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + +S+ + + +I + + H R+ G C+ C Sbjct: 56 LLWTELFRGLGMTLSYMFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 113 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP+ + + R+ ID +C C + Sbjct: 114 CEAACPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFCQE 155 Query: 236 SCPKG 240 +CP Sbjct: 156 ACPVD 160 >gi|20808125|ref|NP_623296.1| formate hydrogenlyase complex iron-sulfur subunit [Thermoanaerobacter tengcongensis MB4] gi|254479089|ref|ZP_05092442.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] gi|20516712|gb|AAM24900.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Thermoanaerobacter tengcongensis MB4] gi|214034971|gb|EEB75692.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] Length = 198 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 21/76 (27%), Gaps = 22/76 (28%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+T+CPS D L I + Sbjct: 35 YDFSRCIGCGACATACPSNAITMDCDLDRGIKSWNINY---------------------- 72 Query: 225 YRCHTIMNCTQSCPKG 240 RC C + CP G Sbjct: 73 GRCIFCGRCEEVCPTG 88 >gi|116748588|ref|YP_845275.1| iron-sulfur binding 4Fe-4S ferredoxin [Syntrophobacter fumaroxidans MPOB] gi|116697652|gb|ABK16840.1| 4Fe-4S ferredoxin, iron-sulfur binding [Syntrophobacter fumaroxidans MPOB] Length = 539 Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 12/109 (11%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL----------IDSR 207 H+ R + CV C C+ C Y + D P + + R + I R Sbjct: 79 HKYRSLRIFMDICVRCGACADKCHFYLGSGDPKNMPVLRAELLRSVYRKEFTQAGKILGR 138 Query: 208 DEFQGERLDNLEDPFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 E ++ + LY +C C+ CP G++ A+ + +L Sbjct: 139 IAGARELTIDVVKEWFLYFFQCTECRRCSLFCPYGIDTAEVTMIGRELL 187 >gi|332296568|ref|YP_004438491.1| NAD(P)H-quinone oxidoreductase subunit I [Thermodesulfobium narugense DSM 14796] gi|332179671|gb|AEE15360.1| NAD(P)H-quinone oxidoreductase subunit I [Thermodesulfobium narugense DSM 14796] Length = 192 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 27/121 (22%), Gaps = 19/121 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + L V + + + R C+MC C T Sbjct: 14 EWFRGLSVTFRTMLKK-PVTRLYPHVKRQPFPGFRGRQALVRDPDKLKERCIMCLRCKTV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPS + +DE L RC C + CP Sbjct: 73 CPSNCIKVEV----------------GKDENNARVLKEYSIDAT--RCIYCGYCVEVCPV 114 Query: 240 G 240 Sbjct: 115 N 115 >gi|306819952|ref|ZP_07453603.1| propanediol utilization protein PduS [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551988|gb|EFM39928.1| propanediol utilization protein PduS [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 442 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 14/124 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + ++ + + + K C C C+ CP Y + L P + Sbjct: 221 KKSKGYILLKKEHSLIKNKGVDQAQAKKLNRGSCEQCRMCTDLCPRYLLGHN--LQPHKM 278 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT-QSCPKGLNPAKAIAKIKMMLL 255 ++ + ID Q +L C C SCP G+ P A + LL Sbjct: 279 VRTQAYNIDDLTGQQTAQL-----------CVQCNLCELFSCPIGIKPMHANNYFRAKLL 327 Query: 256 DRKI 259 + I Sbjct: 328 NEGI 331 >gi|282853211|ref|ZP_06262548.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes J139] gi|282582664|gb|EFB88044.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes J139] gi|314982738|gb|EFT26830.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL110PA3] gi|315091392|gb|EFT63368.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL110PA4] Length = 1204 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 15/88 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C+ CP + +Y + L A + FQ L+ Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYYPQSQLESAP-------ESFQSAELNAAG 739 Query: 220 DPFRLYR-------CHTIMNCTQSCPKG 240 P Y C C ++CP Sbjct: 740 LPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|228989723|ref|ZP_04149705.1| formate dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|229003539|ref|ZP_04161357.1| formate dehydrogenase [Bacillus mycoides Rock1-4] gi|228757777|gb|EEM07004.1| formate dehydrogenase [Bacillus mycoides Rock1-4] gi|228770057|gb|EEM18639.1| formate dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 980 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D + ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFLSSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSARAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P + + + E C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSAKEVDMTHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|154482955|ref|ZP_02025403.1| hypothetical protein EUBVEN_00653 [Eubacterium ventriosum ATCC 27560] gi|149736239|gb|EDM52125.1| hypothetical protein EUBVEN_00653 [Eubacterium ventriosum ATCC 27560] Length = 437 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 20/101 (19%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D+ C+ C C+ CP L + D E + Sbjct: 354 DQVAHAKTTNCLNCGKCAQVCP--------------EGLICAKLAHAADADDMEAFVKMH 399 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML--LDRK 258 C C +CP N +++ +K + RK Sbjct: 400 GME----CIECGTCNYNCPANRNITQSVRTMKRKVQAARRK 436 >gi|20093760|ref|NP_613607.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus kandleri AV19] gi|19886667|gb|AAM01537.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus kandleri AV19] Length = 377 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 25/190 (13%) Query: 79 SCREGICGSCGMNIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKDL---VVDMSHFYS 134 S R C C NI LAC + D + +DL +D Sbjct: 186 SGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDAGTMEV 245 Query: 135 QHRSIEPWLK-------TVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYWW 185 Q + + ED + L C+ C C CP Sbjct: 246 QEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVCPV--- 302 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-RCHTIMNCTQSCPKGLNPA 244 + W R+ + + + C C +CP + Sbjct: 303 --------CASCEEGCWSFAGRESVTPTPVWHAHIAQCVALYCVECGACETACPAEIPLT 354 Query: 245 KAIAKIKMML 254 + + ++ L Sbjct: 355 RIYSVLRERL 364 >gi|325290013|ref|YP_004266194.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Syntrophobotulus glycolicus DSM 8271] gi|324965414|gb|ADY56193.1| 4fe-4S ferredoxin, iron-sulfur binding protein, putative [Syntrophobotulus glycolicus DSM 8271] Length = 330 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 29/120 (24%), Gaps = 21/120 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------------- 201 E + +C+ C C+ CP+ YR Sbjct: 210 KGMFESPLWEEVSRKCLNCGACTYICPTCHCFDISQNIRGEEGIKYRCWDSCMYGEYTQM 269 Query: 202 -WLIDSRDEFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + R + + + + C C CP ++ + KIK Sbjct: 270 AGGHNPRPGKKEKVRNRFMHKLSYFPERYNMLLCTGCGRCLNVCPINMDITSIMNKIKEA 329 >gi|322371960|ref|ZP_08046502.1| hypothetical protein ZOD2009_20702 [Haladaptatus paucihalophilus DX253] gi|320548382|gb|EFW90054.1| hypothetical protein ZOD2009_20702 [Haladaptatus paucihalophilus DX253] Length = 734 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 9/90 (10%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + ED Q + LY C+ C C+ SC ++ G Sbjct: 309 MAMREDDQLRETLY-CIRCGACANSCANFQHVGGHAFGGETYTG-------GIATGWETG 360 Query: 215 LDNLEDPFRL-YRCHTIMNCTQSCPKGLNP 243 + +E C C +CP ++ Sbjct: 361 VHGIESAGEFNDLCTGCSRCVNACPVKIDI 390 >gi|269139848|ref|YP_003296549.1| pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [Edwardsiella tarda EIB202] gi|267985509|gb|ACY85338.1| pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [Edwardsiella tarda EIB202] gi|304559687|gb|ADM42351.1| Pyruvate-flavodoxin oxidoreductase [Edwardsiella tarda FL6-60] Length = 1193 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 20/86 (23%), Gaps = 23/86 (26%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C+ CP ++A + D D + Sbjct: 691 WRPDLCIQCGNCAFVCP------------HAAIRAKFYHQDLLDGAPQDFRSAPISARGF 738 Query: 225 -----------YRCHTIMNCTQSCPK 239 C C ++CP Sbjct: 739 PETRYTLQVYPEDCTGCGLCVEACPV 764 >gi|269794081|ref|YP_003313536.1| NADH dehydrogenase subunit I [Sanguibacter keddieii DSM 10542] gi|269096266|gb|ACZ20702.1| NADH dehydrogenase subunit I [Sanguibacter keddieii DSM 10542] Length = 252 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 11/114 (9%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V S + + + + V KP + DGL +C+ C C+ +CP+ Sbjct: 42 FGVTFSSMFRPTVTEQYPFEKVPTKPRYHGRHQL--NRYADGLEKCIGCELCAWACPADA 99 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + L D GER ++ L RC C ++CP Sbjct: 100 IY--------VEGSSNAELPDGGHRSPGERYGSVYQINYL-RCIFCGLCIEACP 144 >gi|228995922|ref|ZP_04155580.1| formate dehydrogenase [Bacillus mycoides Rock3-17] gi|228763894|gb|EEM12783.1| formate dehydrogenase [Bacillus mycoides Rock3-17] Length = 980 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D + ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFLSSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSARAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 SPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 P + + + E C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSAKEVDMTHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|300311103|ref|YP_003775195.1| NADH dehydrogenase I subunit I [Herbaspirillum seropedicae SmR1] gi|300073888|gb|ADJ63287.1| NADH dehydrogenase I (Chain I) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 162 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 30 RKITVQFPEEKTPMSPRFRGLHALRRYPNGEERCIACKLCEAVCPAMAITIESEQRADGT 89 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 90 RRTSRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|300113273|ref|YP_003759848.1| NADH-quinone oxidoreductase subunit I [Nitrosococcus watsonii C-113] gi|299539210|gb|ADJ27527.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus watsonii C-113] Length = 162 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 23/119 (19%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + H R+ +G C+ C C CP+ D Sbjct: 26 YLFTKKVTVQFPEERTPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSEQR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R+ ID L++C C +SCP +I + + Sbjct: 86 DDGTRRTTRYDID------------------LFKCIYCGFCEESCPV-----DSIVETR 121 >gi|219667916|ref|YP_002458351.1| hypothetical protein Dhaf_1874 [Desulfitobacterium hafniense DCB-2] gi|219538176|gb|ACL19915.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 377 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 21/98 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + + C C C C + + S Q + Sbjct: 9 AACQEIIDNCTDCGLCRAECQLLERIDESLV--------------SLATRQPTVSEA--- 51 Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 Y C C CP GL+P A ++ + + Sbjct: 52 ----YNCSLCGLCESVCPAGLSPKYMFAALREQSVAKG 85 >gi|220909729|ref|YP_002485040.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Cyanothece sp. PCC 7425] gi|219866340|gb|ACL46679.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Cyanothece sp. PCC 7425] Length = 1193 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 3/93 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LID 205 A+ ++ + CV C C CP S Y + + + Sbjct: 665 PTATAQWEKRNIAQEIPVWEPDLCVQCGKCVMVCPHAVIRSKVYTPDHLETAPTEFKSAN 724 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +RD + ++ C C CP Sbjct: 725 ARDHDWTDLKFTIQVAAE--DCTGCGICVDVCP 755 >gi|171059456|ref|YP_001791805.1| cytochrome c oxidase accessory protein CcoG [Leptothrix cholodnii SP-6] gi|170776901|gb|ACB35040.1| cytochrome c oxidase accessory protein CcoG [Leptothrix cholodnii SP-6] Length = 495 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 9/70 (12%) Query: 183 YWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLDNLE-DPFRLYRCHTIMNC 233 +Y+ P Q+ + D+ R E +G R + L C C Sbjct: 230 MREQVCKYMCPYARFQSAMFDKDTLIITYDAERGEPRGSRSKKADPTALGLGACVDCNLC 289 Query: 234 TQSCPKGLNP 243 Q CP G++ Sbjct: 290 VQVCPTGIDI 299 >gi|125623314|ref|YP_001031797.1| NifJ protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492122|emb|CAL97051.1| NifJ protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070063|gb|ADJ59463.1| NifJ protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 1223 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L D + L Sbjct: 683 PEWNAQACIQCNECSFVCP--HAAIRPFLVDEDEWNQAPEGFHVMDYKGSDGLKYRIQV- 739 Query: 223 RLYRCHTIMNCTQSCPKG 240 + C C ++CPK Sbjct: 740 SVEDCTGCGLCVEACPKK 757 >gi|29830419|ref|NP_825053.1| oxidoreductase [Streptomyces avermitilis MA-4680] gi|29607530|dbj|BAC71588.1| putative oxidoreductase [Streptomyces avermitilis MA-4680] Length = 982 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + + ++ G R + Sbjct: 509 RRCVGVAKCRTTSVSGAGVMCPSFRATGEEEHSTRGRARLLHEMLAGEVITDGWRSAEVR 568 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 569 DA--LDLCLSCKGCRTDCPVGVD 589 >gi|116511282|ref|YP_808498.1| pyruvate:ferredoxin oxidoreductase, fusion of alpha, beta and gamma subunit [Lactococcus lactis subsp. cremoris SK11] gi|116106936|gb|ABJ72076.1| Pyruvate:ferredoxin oxidoreductase, fusion of alpha, beta and gamma subunit [Lactococcus lactis subsp. cremoris SK11] Length = 1223 Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L D + L Sbjct: 683 PEWNAQACIQCNECSFVCP--HAAIRPFLVDEDEWNQAPEGFHVMDYKGSDGLKYRIQV- 739 Query: 223 RLYRCHTIMNCTQSCPKG 240 + C C ++CPK Sbjct: 740 SVEDCTGCGLCVEACPKK 757 >gi|330447307|ref|ZP_08310957.1| cytochrome c oxidase accessory protein CcoG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491498|dbj|GAA05454.1| cytochrome c oxidase accessory protein CcoG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 475 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 23/83 (27%), Gaps = 7/83 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-D 220 + C CP Y + Y D+R E +G R Sbjct: 212 CTYVNAGWMRSIVCIHMCP-YARFQSAMFDKDSYIVGY----DTRRGEKRGPRSRKANPA 266 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C Q CP G++ Sbjct: 267 EQGLGDCIDCNLCVQVCPTGIDI 289 >gi|282855266|ref|ZP_06264598.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes J139] gi|282581854|gb|EFB87239.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes J139] gi|314923986|gb|EFS87817.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL001PA1] gi|314983070|gb|EFT27162.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL110PA3] gi|315090603|gb|EFT62579.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL110PA4] gi|315104129|gb|EFT76105.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL050PA2] Length = 199 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + + K + H+ + DGL +CV C C+ Sbjct: 1 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW 60 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQ 235 +CP+ + D+ DE + GER + + L RC C + Sbjct: 61 ACPADAIYVEG--------------ADNTDEERYSPGERYGRVYEINYL-RCILCGMCIE 105 Query: 236 SCP 238 +CP Sbjct: 106 ACP 108 >gi|302345370|ref|YP_003813723.1| putative iron-sulfur cluster-binding protein [Prevotella melaninogenica ATCC 25845] gi|302149977|gb|ADK96239.1| putative iron-sulfur cluster-binding protein [Prevotella melaninogenica ATCC 25845] Length = 330 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 18/159 (11%) Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 + LA + P + D + +++Q ++ W+ Sbjct: 119 LMKQKMRELAIKITERWQLPKQEEGEEPSVRCFCDTAPVLERYWAQ-KAGLGWVGRNHQL 177 Query: 150 PAKE----------LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 L D C C C +CP+ D A + Sbjct: 178 IIPHAGSMFFLGEIFLPFDVDVYDEAMSNRCGSCHRCIDACPTRAIIPDE-DFHAERCLS 236 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ + ++R E E +++ D +Y C C +CP Sbjct: 237 YQLI-ENRGELTDEAKNHMGDT--IYGCD---RCQTACP 269 >gi|227113510|ref|ZP_03827166.1| pyruvate-flavodoxin oxidoreductase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1177 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + + C C C +CP + + + P + A L S Sbjct: 666 PTGTTKWEKRNIAEEIPLWQPQLCTQCNHCVAACP-HSAIRAKVVQPDAMEHAPASL-QS 723 Query: 207 RD-EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + + R C C + CP Sbjct: 724 LDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAK 758 >gi|167563646|ref|ZP_02356562.1| formate dehydrogenase, alpha subunit [Burkholderia oklahomensis EO147] Length = 982 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR D D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFESRVAASAG--DAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|121609754|ref|YP_997561.1| NADH dehydrogenase subunit I [Verminephrobacter eiseniae EF01-2] gi|156633541|sp|A1WLN6|NUOI_VEREI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|121554394|gb|ABM58543.1| NADH-quinone oxidoreductase, chain I [Verminephrobacter eiseniae EF01-2] Length = 169 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + + H R+ +G C+ C C CP+ + L Sbjct: 37 RKVTVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALAITIESELRADGS 96 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 97 RRTTRYDID------------------LTKCIFCGFCEESCPVD 122 >gi|33864284|ref|NP_895844.1| NADH dehydrogenase subunit I [Prochlorococcus marinus str. MIT 9313] gi|81711995|sp|Q7TUL5|NDHI_PROMM RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|33641064|emb|CAE22193.1| putative NADH Dehydrogenase subunit [Prochlorococcus marinus str. MIT 9313] Length = 218 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +I+ L V H + +++ + + P +E +C+ C C Sbjct: 19 ANYLIQGLAVTFDHLRRRPITVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|330884677|gb|EGH18826.1| glycolate oxidase iron-sulfur subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 49 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 7/56 (12%) Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 D GP + + +++ + + RL L RC + NC +CP G+ Sbjct: 1 MGDELDGPRGRIYLIKQVLEGQQVTEKTRL-------HLDRCLSCRNCETTCPSGV 49 >gi|260775005|ref|ZP_05883905.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio coralliilyticus ATCC BAA-450] gi|260609095|gb|EEX35254.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio coralliilyticus ATCC BAA-450] Length = 472 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 25/91 (27%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 + C CP Y + Y D+ R E +G R + Sbjct: 211 AGCTYANAGWMRSIMCVHMCP-YARFQSAMFDKDTFIVGY----DTKRGESRGARSRKAD 265 Query: 220 -DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 PKALGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|253577842|ref|ZP_04855114.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850160|gb|EES78118.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 258 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 9/134 (6%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC----ACCSTSC 180 L+ ++ FYS+ + + PW + ++ + L MC C C Sbjct: 124 LLSCITGFYSKLQGMSPWDVFSMLTTGRLPKSTYIVGTVLLILIMAGMCTQERFFCQFLC 183 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER----LDNLEDPFRLYRCHTIMNCTQS 236 P + + P L + R + +R LD D C CT Sbjct: 184 PMGAVFAIMPIIPGALFKRNRPNCAPKCTLCKKRCPAHLDIDGDTAHSGECICCHACTAV 243 Query: 237 CP-KGLNPAKAIAK 249 CP K ++ I K Sbjct: 244 CPRKNIHTGTVIDK 257 >gi|163760535|ref|ZP_02167616.1| nitrogen fixation protein fixG [Hoeflea phototrophica DFL-43] gi|162282150|gb|EDQ32440.1| nitrogen fixation protein fixG [Hoeflea phototrophica DFL-43] Length = 528 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 17/82 (20%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C CP D R E +G + Sbjct: 226 YTFGGLMREQVCIYMCP----WPRIQAAMLDENSLVVTYNDWRGEPRGRHAKKAAAEGLV 281 Query: 225 -YRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 282 QGDCVDCNACVAVCPMGIDIRD 303 >gi|159026286|emb|CAO88863.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1184 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LID 205 ++ ++ + CV C C CP S Y + + + + Sbjct: 669 PTATSQWEKRNIAQEIPVWDADVCVQCGKCVLVCPHAVIRSKVYDEVELATAPETFKVAN 728 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++D ++ C C CP Sbjct: 729 AKDHDWKGLKFTIQVAAE--DCTGCGLCVDVCPAK 761 >gi|78486301|ref|YP_392226.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thiomicrospira crunogena XCL-2] gi|78364587|gb|ABB42552.1| iron-sulfur cluster binding protein [Thiomicrospira crunogena XCL-2] Length = 489 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 2/68 (2%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP Y + ++ Y + + +R ED L C C Sbjct: 236 CIGFCP-YARIQGAMIDTETVVPTYD-IDRGEPRGRMKRAKPGEDAPELGDCIDCNLCVA 293 Query: 236 SCPKGLNP 243 CP G++ Sbjct: 294 VCPTGVDI 301 >gi|150391039|ref|YP_001321088.1| hypothetical protein Amet_3298 [Alkaliphilus metalliredigens QYMF] gi|149950901|gb|ABR49429.1| protein of unknown function DUF224, cysteine-rich region domain protein [Alkaliphilus metalliredigens QYMF] Length = 404 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C+ +CT CPK L+ +A ++ +++ Sbjct: 69 YSCNMCSDCTLVCPKDLDLKEAFLHMRKDIVEE 101 >gi|328783520|ref|XP_003250306.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform 1 [Apis mellifera] Length = 175 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 20/123 (16%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + +I+ L + MSHF+++ +I + + H R+ G C+ C C Sbjct: 26 FLEIIRGLGITMSHFFTEPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCE 83 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ + + R+ ID +C C ++C Sbjct: 84 AICPAQAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQEAC 125 Query: 238 PKG 240 P Sbjct: 126 PVD 128 >gi|326316383|ref|YP_004234055.1| cytochrome c oxidase accessory protein CcoG [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373219|gb|ADX45488.1| cytochrome c oxidase accessory protein CcoG [Acidovorax avenae subsp. avenae ATCC 19860] Length = 482 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYR 226 + C CP Y L+ Y + R E +G R +++ L Sbjct: 221 AGFLREQVCKYMCP-YARFQSAMFDKDTLIVTYDEI---RGEPRGPRNKSVDHRARGLGD 276 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 277 CIDCTLCVQVCPVGIDI 293 >gi|242238722|ref|YP_002986903.1| hydrogenase 4 subunit H [Dickeya dadantii Ech703] gi|242130779|gb|ACS85081.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] Length = 189 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ CA C+ +CP+ D D GER+ L Sbjct: 33 PEYDPAQCIGCAACTMACPANALTMDN------------------DINNGERIWQLF--- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|91774988|ref|YP_544744.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91708975|gb|ABE48903.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 478 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 12/82 (14%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED--------PFRLYRC 227 C+ +CP Y P L AY R E R ++ C Sbjct: 218 CTLACP-YARFQGVMYEPDTLTVAYDV---RRGEGTAGRKAPVKGLRTREERQAAGHGDC 273 Query: 228 HTIMNCTQSCPKGLNPAKAIAK 249 C Q CP G++ + Sbjct: 274 IDCGYCVQVCPTGIDIRDGLQY 295 >gi|76666613|emb|CAJ31134.1| Hdr-like menaquinol-oxidizing enzyme, subunit D (HmeD) [uncultured sulfate-reducing bacterium] Length = 543 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------------IDS 206 R + CV C C+ C + + D P I + R + Sbjct: 84 RSLRVFMDTCVRCGACADKCHFFIGSGDPKNMPVIRAELLRSIYRQDFTVFGKFLGKFGG 143 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E L + Y+C C+ CP G++ A+ I + LL Sbjct: 144 GRTLTAEILKEWY--YYFYQCTECRRCSVYCPYGIDTAE-ITMLARELL 189 >gi|148265602|ref|YP_001232308.1| heterodisulfide reductase subunit C-like protein [Geobacter uraniireducens Rf4] gi|146399102|gb|ABQ27735.1| Heterodisulfide reductase subunit C-like protein [Geobacter uraniireducens Rf4] Length = 192 Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 36/115 (31%), Gaps = 13/115 (11%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 ++ T+S + + + C C C+ CP + + Sbjct: 1 MKNTKMTLSTETMNLDFVRKVESLSGSSVRRCFQCGKCTAGCPMRSFME------HPPNR 54 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R L + + + ++ C + C+ CP ++ A + ++ + Sbjct: 55 IMRLLQLGQ-------WERILAGRSIWYCASCETCSTRCPNKVDLAAIMDALRKL 102 >gi|303245210|ref|ZP_07331508.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanothermococcus okinawensis IH1] gi|302484424|gb|EFL47390.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanothermococcus okinawensis IH1] Length = 378 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 58/224 (25%), Gaps = 30/224 (13%) Query: 33 YRWNPDNKGNPCMDT--YYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGM 90 Y NP++ +D + ++L + + + R C C + Sbjct: 138 YDVNPEDVVKEEIDKGKFIIELKDGTEKGIKIDELEEKGY---------GRRKNCQRCEL 188 Query: 91 NIDGTNTLAC-VKDMKDIKGAIAVYPLPHMSVIKD--------LVVDMSHFYSQHRSIEP 141 I +AC + + V +I+ + + IE Sbjct: 189 KIPRNADIACGNWGAEKGWTFVEVCSEKGRELIESAEKEGYIKIKTPSENNIKIREKIEK 248 Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 + +S K+ L+ + Y C+ C C CP + Sbjct: 249 IMIKLSKSSQKKQLEEEYPSIEKWNEYWNRCIKCYGCRDVCPIC--------FCKECVLN 300 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 ++ + + + C C CP + Sbjct: 301 EDYVDKGKIPPDPIMFQGIRLSHMSFSCVNCGQCEDVCPMEIPL 344 >gi|282860652|ref|ZP_06269718.1| FAD linked oxidase domain protein [Streptomyces sp. ACTE] gi|282564388|gb|EFB69924.1| FAD linked oxidase domain protein [Streptomyces sp. ACTE] Length = 936 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + + ++ G R + Sbjct: 533 RRCVGVAKCRTATAPGADVMCPSFRATGEEAHSTRGRARLLHEMLAGEVVTDGWRSTEVR 592 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 593 DA--LDLCLSCKGCRSDCPVGVD 613 >gi|225378477|ref|ZP_03755698.1| hypothetical protein ROSEINA2194_04145 [Roseburia inulinivorans DSM 16841] gi|225209700|gb|EEG92054.1| hypothetical protein ROSEINA2194_04145 [Roseburia inulinivorans DSM 16841] Length = 1181 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 18/163 (11%), Positives = 42/163 (25%), Gaps = 13/163 (7%) Query: 85 CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLK 144 G ++ + + P V DL+ ++ + ++ Sbjct: 609 AGVDAVHKVEVPASWSNPEADPAPKKLTGRPETVKMVE-DLMNPIALMDGDSLPVSAFMG 667 Query: 145 TVSPKPAK----ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + + + +C+ C C+ C ++ ++A Sbjct: 668 NPDGQFEQGASAYEKRGTAVTVPTWDAAKCIQCNQCAFVCS--HATIRPFMLSEDEVKAA 725 Query: 201 RW---LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L D++ + + P C C CP G Sbjct: 726 PANIKLADTKPKASEYKYTMSVSPL---DCMGCGECITVCPVG 765 >gi|225573140|ref|ZP_03781895.1| hypothetical protein RUMHYD_01331 [Blautia hydrogenotrophica DSM 10507] gi|225039495|gb|EEG49741.1| hypothetical protein RUMHYD_01331 [Blautia hydrogenotrophica DSM 10507] Length = 336 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 24/113 (21%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA---------------------Y 200 + C+ C C+ CP+ + + + A Sbjct: 214 MWQEYAGRCIGCGRCNFVCPTCTCFTMQDIFYRDNENAGERRRVWASCQVDGYSDIAGGI 273 Query: 201 RWLIDSRDEFQGERLDNL---EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 R+ D + + + L + ++ F + C C CP+ ++ + K+ Sbjct: 274 RFRKDQGERMRFKVLHKVYNYKNRFGYHMCVGCGRCENVCPEYISYIHCLHKL 326 >gi|313675720|ref|YP_004053716.1| cytochrome c oxidase accessory protein ccog [Marivirga tractuosa DSM 4126] gi|312942418|gb|ADR21608.1| cytochrome c oxidase accessory protein CcoG [Marivirga tractuosa DSM 4126] Length = 469 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 ++ C+ CP Y +L ++ Y WL R E +G+ N + Sbjct: 207 FYFVFSYFREQACTVVCP-YGRLQGVFLDKKSIVVIYDWL---RGEPRGKLKKNEPQADK 262 Query: 224 LYRCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 263 -GDCIDCNLCVQVCPTGIDI 281 >gi|322435034|ref|YP_004217246.1| NADH-quinone oxidoreductase, chain I [Acidobacterium sp. MP5ACTX9] gi|321162761|gb|ADW68466.1| NADH-quinone oxidoreductase, chain I [Acidobacterium sp. MP5ACTX9] Length = 166 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + H+ ++ +GL +CV C C+ +CPS Y+ A + R Sbjct: 34 PMRGAQFQQRFRGKHQLQRDENGLEKCVACFLCAAACPSNCI----YIEAAENTEEVRI- 88 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ER + + RC C ++CP AI Sbjct: 89 ------SSAERYAKVYNIDY-NRCIFCGYCVEACP-----TDAITH 122 >gi|260429943|ref|ZP_05783918.1| putative [NiFe] hydrogenase beta subunit containing protein [Citreicella sp. SE45] gi|260418866|gb|EEX12121.1| putative [NiFe] hydrogenase beta subunit containing protein [Citreicella sp. SE45] Length = 379 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 22/108 (20%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-------LID------ 205 E D C+ C C+ +CP+ + + + A RW D Sbjct: 260 ESPVWADIASRCLTCGNCTLACPTCFCSDVEEVSNLSGDHAERWQLWGSCFNPDFSFIHG 319 Query: 206 -SRDEFQGERLDNLE--------DPFRLYRCHTIMNCTQSCPKGLNPA 244 R D F C C CP G++ Sbjct: 320 GPVRSSPAARYRQWMTHKLSYWHDQFGSSGCVGCGRCITWCPVGIDLV 367 Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 A + R + D RL++ RC T NCT +CP Sbjct: 237 RAAAARQTRTMPDDIASGLKLRLESPVWADIASRCLTCGNCTLACP 282 >gi|219854110|ref|YP_002471232.1| hypothetical protein CKR_0767 [Clostridium kluyveri NBRC 12016] gi|219567834|dbj|BAH05818.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 442 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 15/101 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C+ CP + P + R + E + + Sbjct: 246 DHMINKAKSSCIQCHYCTDMCPRFLIG-----HPLHPHKVMRGIA--LAEGNEALKEAII 298 Query: 220 DPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL+P + A +K ++ + I Sbjct: 299 -------CCQCGVCEMFACPMGLSPRRMNAYVKAQMMAKGI 332 >gi|209735168|gb|ACI68453.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + MS+ + + +I + + H R+ +G C+ C Sbjct: 59 LLWTELFRGLGMTMSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPNGEERCIACKL 116 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 117 CEAVCPAQAITIEAETRADGSRRTTRYDIDMT------------------KCIYCGFCQE 158 Query: 236 SCPKG 240 +CP Sbjct: 159 ACPVD 163 >gi|206890889|ref|YP_002248948.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742827|gb|ACI21884.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 187 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 36/121 (29%), Gaps = 18/121 (14%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +IK L++ ++ +I + + + R G CV C C+ Sbjct: 12 DLIKGLLITFKTIFTTPVTIRYPKQKRPLEDGFRGRHAFV-RDPETGKERCVACTKCAQV 70 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CPS D + P + +D L RC C + CP Sbjct: 71 CPSQCIYIDYSINPETGARVL----------TKYEIDAL-------RCIFCGYCEEVCPV 113 Query: 240 G 240 Sbjct: 114 N 114 >gi|158340895|ref|YP_001522063.1| pyruvate-flavodoxin oxidoreductase [Acaryochloris marina MBIC11017] gi|158311136|gb|ABW32749.1| pyruvate-flavodoxin oxidoreductase [Acaryochloris marina MBIC11017] Length = 1207 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 P T AK ++ + C+ C C CP + + P +A Sbjct: 666 PADGTYPTGTAKWEKRNIAQFIPVWDPEVCIQCGKCVMVCP-HSVIRSKVYDPEHTEKAP 724 Query: 201 RWLIDS--RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + RD + +++ C C CP Sbjct: 725 TTFKSTAARDHAWSDLKFSIQVAPE--DCTGCGICVDVCPAK 764 >gi|78042713|ref|YP_359019.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77994828|gb|ABB13727.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 402 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 9/86 (10%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-YRCH 228 C+ C C CP + + Y + W +E L Y C Sbjct: 319 CLRCGGCLYECPVFSLTAGYYGYKYLGGIGSIW--------TAFVAGGIEKAAPLAYVCL 370 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C + CP ++ + ++ +L Sbjct: 371 RCGRCQERCPMKIDVPRMTLALRQLL 396 >gi|70729299|ref|YP_259036.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] gi|68343598|gb|AAY91204.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens Pf-5] Length = 471 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R + L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEARGPRKKGADYKAQGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|88812968|ref|ZP_01128211.1| NADH dehydrogenase subunit I [Nitrococcus mobilis Nb-231] gi|88789746|gb|EAR20870.1| NADH dehydrogenase subunit I [Nitrococcus mobilis Nb-231] Length = 162 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 23/108 (21%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ + + R+ Sbjct: 37 PEERAPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIEAEPRADGTRRTTRYD 96 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 ID L++C C +SCP +I + + Sbjct: 97 ID------------------LFKCIYCGFCEESCPV-----DSIVETR 121 >gi|84499617|ref|ZP_00997905.1| NAD-dependent formate dehydrogenase, alpha subunit [Oceanicola batsensis HTCC2597] gi|84392761|gb|EAQ04972.1| NAD-dependent formate dehydrogenase, alpha subunit [Oceanicola batsensis HTCC2597] Length = 974 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 34/213 (15%) Query: 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86 L E R P + P V + L + D L G C Sbjct: 71 LVEIEGRRGTPASCTTPVAQGMEVRTQSDKLHKLRRGVMELYISDHPLDCLTCSANGDC- 129 Query: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYP-LPHMSVIKDLVVDMSHFYSQHRSIEPWLKT 145 + + ++DM+ G P + DL Sbjct: 130 ----ELQDMAGMVGLRDMRYTPGDNHYAPTMAGGLTQSDLRART---------------P 170 Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + A+ + + + +C++C+ C +C + G L R D Sbjct: 171 DAATNARYIPKDDSNPYFTYDPAKCIVCSRCVRAC-------EEVQGTFALTIESR-GFD 222 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SR F + D L C + C Q+CP Sbjct: 223 SRVSFGAKSDDALHSD-----CVSCGACVQACP 250 >gi|119355987|ref|YP_910631.1| DsrK protein [Chlorobium phaeobacteroides DSM 266] gi|119353336|gb|ABL64207.1| putative sulfite reductase-associated electron transfer protein DsrK [Chlorobium phaeobacteroides DSM 266] Length = 549 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R L CV C C+ C + D P + + R + + + L Sbjct: 92 RSLKLYLDSCVRCGACADKCHFFLGTGDPRNMPVLRAELLRSVYRNDFPLVEKILKGFSG 151 Query: 221 PFRL------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 +L Y+C C+ CP G++ A+ + +L Sbjct: 152 SRKLTAEVIKEWHMYYYQCTECRRCSVFCPLGIDTAEITMVARELL 197 >gi|302342002|ref|YP_003806531.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfarculus baarsii DSM 2075] gi|301638615|gb|ADK83937.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfarculus baarsii DSM 2075] Length = 541 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 17/109 (15%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------------IDS 206 R + CV C C+ C + D P + + R + + Sbjct: 83 RSFKLFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRQDFTALGKVFKKMAG 142 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 E + + ++C C+ CP G++ A+ I I LL Sbjct: 143 GRPLTEEVIKEWF--YYFFQCTECRRCSLFCPYGIDTAE-ITIIARELL 188 >gi|153868836|ref|ZP_01998573.1| electron transport protein DsrK [Beggiatoa sp. PS] gi|152074579|gb|EDN71419.1| electron transport protein DsrK [Beggiatoa sp. PS] Length = 475 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 31/106 (29%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LIDSRDE 209 R L CV C C+ C D P R L Sbjct: 43 RSLRVYLDACVKCGACTDKCHYMIGTHDPKNMPVARQDLLRQVYRRYFTWAGKLFPKLVG 102 Query: 210 FQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D L+D + Y C C+ CP G++ A + +L Sbjct: 103 AKDLTKDVLDDWYNYYHQCSQCRRCSVFCPYGIDTADISMAAREIL 148 >gi|87200587|ref|YP_497844.1| 4Fe-4S ferredoxin, iron-sulfur binding [Novosphingobium aromaticivorans DSM 12444] gi|87136268|gb|ABD27010.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 489 Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 4/82 (4%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L + C CP + L L+ Y+ D R E +G ++ Sbjct: 208 MTTFVLGGFLREQVCIYMCP-WPRIQTAMLDEKSLIVTYK---DWRGEPRGSLKTAMKAA 263 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 L C + C CP G++ Sbjct: 264 TPLGDCIDCLQCVAVCPTGIDI 285 >gi|301630890|ref|XP_002944549.1| PREDICTED: nitrogen fixation protein fixG-like [Xenopus (Silurana) tropicalis] Length = 474 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 7/78 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDP-FRLY 225 + C CP Y L+ +Y D R E + R +++ L Sbjct: 212 AGFLREQVCKYMCP-YARFQSAMFDKDTLVVSY----DPVRGEPRAPRNKSIDHKAQGLG 266 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 267 DCIDCSLCVQVCPTGIDI 284 >gi|296132075|ref|YP_003639322.1| FAD linked oxidase domain protein [Thermincola sp. JR] gi|296030653|gb|ADG81421.1| FAD linked oxidase domain protein [Thermincola potens JR] Length = 895 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 6/68 (8%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C +C C +C + P I + E L + C T Sbjct: 504 CALCGYCRNTCTVFDAVPWESNSPRGKYYLLTQYIKGNIQLDEEVSKAL------FSCTT 557 Query: 230 IMNCTQSC 237 C + C Sbjct: 558 CAKCDKVC 565 >gi|138895374|ref|YP_001125827.1| subunit gamma of pyruvate oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196249178|ref|ZP_03147877.1| pyruvate/ketoisovalerate oxidoreductase, gamma subunit [Geobacillus sp. G11MC16] gi|134266887|gb|ABO67082.1| Gamma subunit of pyruvate oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196211407|gb|EDY06167.1| pyruvate/ketoisovalerate oxidoreductase, gamma subunit [Geobacillus sp. G11MC16] Length = 336 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 18/140 (12%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A ++ + + + P + + V F + + I + K + S Sbjct: 181 ANIRAFRRGYEEVRIQASPAPTEERTFVRPSPRFGYETQLIGGVIVAGGNSLLKNVSGSR 240 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C+ C C CP + + + Q + ID Sbjct: 241 QGFLPRWEADKCIHCVACDNVCPDLCFVWEERVDKKGRKQMFLAGID------------- 287 Query: 219 EDPFRLYRCHTIMNCTQSCP 238 C + C ++CP Sbjct: 288 -----YQYCKGCLKCVEACP 302 >gi|123965738|ref|YP_001010819.1| aldo/keto reductase [Prochlorococcus marinus str. MIT 9515] gi|123200104|gb|ABM71712.1| Aldo/keto reductase family [Prochlorococcus marinus str. MIT 9515] Length = 380 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 14/136 (10%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + FY + I K S + + + +C C C CPS Sbjct: 246 KIEDFYIAEKLINSSQKLTSSEINAL-KNIEKVANEELKSSKCEQCRSCLP-CPS-EIPI 302 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR------CHTIMNCTQSCPKGL 241 L + Y + EF ER + + + C C CP L Sbjct: 303 PEILRLRNISLGY-----GQIEFAKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSEL 357 Query: 242 NPAKAIAKIKMMLLDR 257 N + + + +L+++ Sbjct: 358 NIPELLKQTHNLLVEK 373 >gi|160874179|ref|YP_001553495.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS195] gi|160859701|gb|ABX48235.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS195] gi|315266411|gb|ADT93264.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS678] Length = 490 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL + Sbjct: 225 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQETNLRE 284 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 285 SN-LGDCVDCNLCVEVCPTGIDI 306 >gi|309776310|ref|ZP_07671298.1| oxidoreductase, aldo/keto reductase family [Erysipelotrichaceae bacterium 3_1_53] gi|308915906|gb|EFP61658.1| oxidoreductase, aldo/keto reductase family [Erysipelotrichaceae bacterium 3_1_53] Length = 378 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 39/138 (28%), Gaps = 8/138 (5%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P++ V+ + M ++ + + + D + C CA C Sbjct: 241 PNVKVVLSGMSTMEQVRDNLSTLGDFQPLSEAEQGLV--KEIADAINKRTMNGCTGCAYC 298 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP + + + + + ++ R C C Sbjct: 299 MP-CPFGLDIPKNFRIWNEHAKYGNTEV-----ARRRYFEEMKAEERSSFCKKCGKCETL 352 Query: 237 CPKGLNPAKAIAKIKMML 254 CP+ + +A++ + Sbjct: 353 CPQHIAIRDDLARMSKDM 370 >gi|226327310|ref|ZP_03802828.1| hypothetical protein PROPEN_01177 [Proteus penneri ATCC 35198] gi|225204528|gb|EEG86882.1| hypothetical protein PROPEN_01177 [Proteus penneri ATCC 35198] Length = 184 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 25/100 (25%), Gaps = 22/100 (22%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+ T L + +C++C C+ +CP+ + L Sbjct: 9 IKTGEATTKYPFKPLDLPDGFRGKPEYDAEQCIVCGACTAACPANALTMETNLETGERHW 68 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + RC C + CP Sbjct: 69 QLF----------------------IGRCIYCGRCEEVCP 86 >gi|224542703|ref|ZP_03683242.1| hypothetical protein CATMIT_01888 [Catenibacterium mitsuokai DSM 15897] gi|224524413|gb|EEF93518.1| hypothetical protein CATMIT_01888 [Catenibacterium mitsuokai DSM 15897] Length = 371 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 35/129 (27%), Gaps = 14/129 (10%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M ++ + + ++ + C C C+ CP Sbjct: 248 MSTMEQVLDNISYMKEFKPLSEEEQNT--IKEAQKALDAIESIPCTACHYCTPGCPMGIE 305 Query: 186 NSDRYLGPAILLQAYRWL-IDSRDEFQGERLD-NLEDPFRLYRCHTIMNCTQSCPKGLNP 243 D + +A W I R + +E + C C CP+ L Sbjct: 306 IPDIF-------KAMNWYKIYGLKGKAKNRYEGIIEKSAKASVCIGCGQCEGVCPQQLPI 358 Query: 244 AKAIAKIKM 252 I +K Sbjct: 359 ---IKYLKE 364 >gi|146308115|ref|YP_001188580.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|145576316|gb|ABP85848.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] Length = 470 Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP + S + I A R R D L C C Sbjct: 222 CRDMCPYSRFQSVMFDSDTLVISYDAARGEN-----RGPRRKDADYKAEGLGDCIDCTLC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|312131432|ref|YP_003998772.1| cytochrome c oxidase accessory protein ccog [Leadbetterella byssophila DSM 17132] gi|311907978|gb|ADQ18419.1| cytochrome c oxidase accessory protein CcoG [Leadbetterella byssophila DSM 17132] Length = 468 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 5/73 (6%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP Y +G + Y W+ R E +G D + C CT Sbjct: 222 CIAICP-YGRLQGVLVGKNTMNVIYDWV---RGEPRGRLKKGAVDVDK-GDCIDCKLCTH 276 Query: 236 SCPKGLNPAKAIA 248 CP ++ I Sbjct: 277 VCPTNIDIRNGIQ 289 >gi|299143760|ref|ZP_07036840.1| electron transport complex, RnfABCDGE type, C subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518245|gb|EFI41984.1| electron transport complex, RnfABCDGE type, C subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 442 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 22/105 (20%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 L ++ + C+ C+ C CP+ I+ D Sbjct: 355 LIFTDEEIENTKETPCIRCSRCVDHCPA--------------------NINPTDINAAIL 394 Query: 215 LDNLE--DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 N++ D +C C+ CP N +++ K + R Sbjct: 395 KGNVDFCDELHADQCMECGICSFVCPAKRNLTQSVKLAKREIKSR 439 >gi|295111367|emb|CBL28117.1| Predicted oxidoreductases of the aldo/keto reductase family [Synergistetes bacterium SGP1] Length = 371 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 37/121 (30%), Gaps = 11/121 (9%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQK--IDGLYECVMCACCSTSCPSYWWNSDRYL 191 +Q ++K + E E R++ L C C CS CP S + Sbjct: 252 AQMEDNLSFMKDFTGLSDAERRTLEEAREELAHIPLIPCTTCNYCSKVCPVEVGISGTF- 310 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR---CHTIMNCTQSCPKGLNPAKAIA 248 + A D E L R C +C Q CP+ + +A Sbjct: 311 ---TAMNALTLYSDLAAAKHQESW--LVGGHGRKRAAECVRCGHCEQVCPQHIAIRDELA 365 Query: 249 K 249 + Sbjct: 366 R 366 >gi|300087937|ref|YP_003758459.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527670|gb|ADJ26138.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 193 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 26/131 (19%) Query: 115 PLPHMS--VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PL H +++ L + H + +++ + ++ DR C+ Sbjct: 3 PLKHFGEGLLRGLKITARHLGRKWITVQYPEQKLTMSRRVRGTDIIWDR------ESCIS 56 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C +CP + SR E + + D++ L C Sbjct: 57 CRACERACPVGAIKMEV----------------SRGEDKKLKTDDITVDLGL--CIFCGL 98 Query: 233 CTQSCPKGLNP 243 C +SCP G++ Sbjct: 99 CIESCPTGVSI 109 >gi|294629953|ref|ZP_06708513.1| oxidoreductase, FAD-binding [Streptomyces sp. e14] gi|292833286|gb|EFF91635.1| oxidoreductase, FAD-binding [Streptomyces sp. e14] Length = 981 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + ++ G R + + Sbjct: 493 RRCVGVAKCRTTEVSGTAVMCPSFRATGREEHSTRGRARLLHEMLAGEVITDGWRSEEVR 552 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 553 DA--LDLCLSCKGCRSDCPVGVD 573 >gi|152993799|ref|YP_001359520.1| NADH dehydrogenase subunit I [Sulfurovum sp. NBC37-1] gi|151425660|dbj|BAF73163.1| NADH-quinone oxidoreductase, chain I [Sulfurovum sp. NBC37-1] Length = 207 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 22/151 (14%) Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 +++ + K + + + L + V +++ + F Q +++ + P Sbjct: 18 MLDLGESPKTGMDKFKQVVNRTFKLELLVGLGVTMREMIN-ALFRGQMHTVK-YPFEKLP 75 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR- 207 + R G Y C+ C C C S +D+R Sbjct: 76 ISPRYRAIHDMLRLLESGHYRCIGCGLCEKICISNCIT-----------------MDTRY 118 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DE Q R + E RC C + CP Sbjct: 119 DENQ--RKEVSEYTINFGRCIFCGYCAEVCP 147 >gi|146303727|ref|YP_001191043.1| Fe-S oxidoreductase-like protein [Metallosphaera sedula DSM 5348] gi|145701977|gb|ABP95119.1| Fe-S oxidoreductase-like protein [Metallosphaera sedula DSM 5348] Length = 400 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 33/110 (30%), Gaps = 23/110 (20%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA---------------ILLQAYRWLIDS 206 + GL EC+ C C +CP + + PA R L Sbjct: 12 YDVWGLQECMRCGICRYACPFWLDSQKATDIPAWRTYEVNKVYSMYYTGYGNVARLLRLR 71 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN--PAKAIAKIKMML 254 R + + L+ Y C CT P + + ++ ML Sbjct: 72 RVKSS----EFLKWRESSYNCTACGACTDVSPLEIPNWYTAIL--LRRML 115 >gi|116249473|ref|YP_765311.1| putative transmembrane fixG protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254121|emb|CAK03724.1| putative transmembrane fixG protein [Rhizobium leguminosarum bv. viciae 3841] Length = 522 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCT 234 C+ CP L L+ Y D R E + + + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHAKKAQVKGLPVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|74317168|ref|YP_314908.1| NADH dehydrogenase subunit I [Thiobacillus denitrificans ATCC 25259] gi|115502546|sp|Q3SJP9|NUOI_THIDA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|74056663|gb|AAZ97103.1| NADH-quinone oxidoreductase chain I [Thiobacillus denitrificans ATCC 25259] Length = 162 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 33/115 (28%), Gaps = 23/115 (20%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R + + H R+ +G C+ C C CP+ D Sbjct: 30 RKVTVQFPEEKTPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSEQRADGT 89 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + R+ ID L +C C +SCP +I + + Sbjct: 90 RRTTRYDID------------------LTKCIFCGFCEESCPV-----DSIVETR 121 >gi|121604338|ref|YP_981667.1| NADH dehydrogenase subunit I [Polaromonas naphthalenivorans CJ2] gi|156633538|sp|A1VM68|NUOI_POLNA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|120593307|gb|ABM36746.1| NADH dehydrogenase subunit I [Polaromonas naphthalenivorans CJ2] Length = 165 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + + Sbjct: 33 RKITIQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESDVREDGS 92 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 93 RRTSRYDID------------------LTKCIFCGFCEESCPVD 118 >gi|330817784|ref|YP_004361489.1| NADH dehydrogenase subunit I [Burkholderia gladioli BSR3] gi|327370177|gb|AEA61533.1| NADH dehydrogenase subunit I [Burkholderia gladioli BSR3] Length = 162 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 18/112 (16%) Query: 129 MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD 188 M+ Y+ R I + H R+ +G C+ C C CP+ + Sbjct: 22 MTGRYTFKRKITVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPAMAITIE 81 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + R+ ID L +C C +SCP Sbjct: 82 SQVRADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|319761770|ref|YP_004125707.1| NADH-quinone oxidoreductase, chain i [Alicycliphilus denitrificans BC] gi|330826550|ref|YP_004389853.1| NAD(P)H-quinone oxidoreductase subunit I [Alicycliphilus denitrificans K601] gi|317116331|gb|ADU98819.1| NADH-quinone oxidoreductase, chain I [Alicycliphilus denitrificans BC] gi|329311922|gb|AEB86337.1| NAD(P)H-quinone oxidoreductase subunit I [Alicycliphilus denitrificans K601] Length = 170 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ + + H R+ +G C+ C C CP+ + + Sbjct: 34 YAFRGKVTVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPAMAITIESDVR 93 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 94 SDGTRRTTRYDID------------------LTKCIFCGFCEESCPVD 123 >gi|227504313|ref|ZP_03934362.1| FAD linked oxidase family protein [Corynebacterium striatum ATCC 6940] gi|227198961|gb|EEI79009.1| FAD linked oxidase family protein [Corynebacterium striatum ATCC 6940] Length = 939 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 9/93 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP-- 221 D + CV C C CPS + P + R + R L L++ Sbjct: 528 EDMINPCVECGFCEPVCPSRHAT----VTPRQRIVLRREMA--RQPEGSAVLRQLQEEYQ 581 Query: 222 -FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C C+ CP ++ + +++ Sbjct: 582 YDAVDMCAADGTCSIPCPISIDTGAVMKQLRKQ 614 >gi|220904113|ref|YP_002479425.1| hypothetical protein Ddes_0839 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868412|gb|ACL48747.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 533 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 22/103 (21%) Query: 167 LYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWL------IDSRDE---------- 209 + CV C CS +C Y + + P + +R + + + Sbjct: 100 MDNCVQCNSCSDACHLYEMSGENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNW 159 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 RL L YRC+ C Q+CP G++ +I+ Sbjct: 160 KTVARLGELA-----YRCNLCRRCAQTCPIGVDNGLMAREIRK 197 >gi|23013091|ref|ZP_00053036.1| COG1143: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Magnetospirillum magnetotacticum MS-1] Length = 162 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + H R+ +G C+ C C CP+ + P +A R+ +D Sbjct: 42 PLSVRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEPEPRPDGSRRARRYDLDMT- 100 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +C C ++CP Sbjct: 101 -----------------KCIYCGLCQEACPVD 115 >gi|332828379|gb|EGK01088.1| hypothetical protein HMPREF9455_02610 [Dysgonomonas gadei ATCC BAA-286] Length = 941 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 12/90 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDPFRL 224 +C+ C C +C S L P + R + SR + QGE RL + + Sbjct: 541 DKCMECGFCEPNCVSEGLT----LSPRQRIVIAREI--SRLKTQGENPARLKQMLHDAKY 594 Query: 225 YR---CHTIMNCTQSCPKGLNPAKAIAKIK 251 Y C T C CP ++ K I ++ Sbjct: 595 YSDETCATDGLCGLICPVKIDTGKFIKDLR 624 >gi|294341669|emb|CAZ90088.1| putative 4Fe-4S ferredoxin [Thiomonas sp. 3As] Length = 736 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 64/237 (27%), Gaps = 27/237 (11%) Query: 18 WNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLY----IKNKIDPT 73 P ++ R + + VD+++ P+ LD + + Sbjct: 171 HEHPVHAGRVRSVR-----------GWLGAFEVDIESANPVDLDVCTRCNACLAACPEGA 219 Query: 74 LTLRRSCREGIC---GSCGMNIDGTNTLACVKDMKDIKGAIAV----YPLPHMSVIKDLV 126 + L C C + + + + + P P +S+ + Sbjct: 220 IGLDYQIDLQRCTGHRDCVQACGAIGAIDFNRGPRADTLQVDLVLDLQPQPSLSLHQPPQ 279 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQS--HEDRQKIDGLYECVMCACCSTSCPSYW 184 + + K + + + ++ + + C C C + Sbjct: 280 GYYVPGSDPLALVRAATELRDLKGSFDKPRFFQYDAKLCAHSRNTLLGCHACIDICSAQA 339 Query: 185 WNSDRYLGP-AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +S L P A I + ++ +E L C CT CP G Sbjct: 340 VHSRARLRPDQTPPIAEADSILPTAAQKKPFVEQIEIDPHL--CVGCGACTTVCPTG 394 >gi|292653651|ref|YP_003533549.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] gi|291369718|gb|ADE01946.1| FAD-linked oxidase domain protein [Haloferax volcanii DS2] Length = 1024 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 10/82 (12%) Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLI--DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP+Y + R + D D+ + L C C + Sbjct: 620 MCPTYRAAGEEITTTRGRANLLRQAMSGDLPDDPTDDEFA----EEVLDLCIGCKGCARD 675 Query: 237 CPKGLNPAKAIAKIKMMLLDRK 258 CP ++ +AK+K ++ + Sbjct: 676 CPSEVD----MAKLKTEVMHAR 693 >gi|167570808|ref|ZP_02363682.1| formate dehydrogenase, alpha subunit [Burkholderia oklahomensis C6786] Length = 982 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C ++ G L A R +SR D D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EKTQGTFALTIAAR-GFESRVAASAG--DAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|77458045|ref|YP_347550.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens Pf0-1] gi|77382048|gb|ABA73561.1| putative ferredoxin [Pseudomonas fluorescens Pf0-1] Length = 472 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R ++ L C C Sbjct: 223 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGESRGPRKKGVDYKAQGLGDCIDCTMC 277 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 278 VQVCPTGIDIRD 289 >gi|117921736|ref|YP_870928.1| formate dehydrogenase subunit alpha [Shewanella sp. ANA-3] gi|117614068|gb|ABK49522.1| formate dehydrogenase, alpha subunit [Shewanella sp. ANA-3] Length = 1432 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 25/96 (26%), Gaps = 8/96 (8%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + A+ C+ C C C QA + Sbjct: 633 TENARHFSVDKSAPFIQFDANRCISCGKCVDVCQQ-QSGHCAIQFSQDSYQALPQEMTQH 691 Query: 208 DEFQGERL---DNLEDPFRLYRCHTIMNCTQSCPKG 240 E + R+ ++ D C NC Q CP G Sbjct: 692 MERRAPRVGFSASMADSH----CVQCGNCVQVCPTG 723 >gi|323141589|ref|ZP_08076472.1| hypothetical protein HMPREF9443_01251 [Phascolarctobacterium sp. YIT 12067] gi|322413931|gb|EFY04767.1| hypothetical protein HMPREF9443_01251 [Phascolarctobacterium sp. YIT 12067] Length = 352 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 31/119 (26%), Gaps = 22/119 (18%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYR-----------WLIDSRDEF 210 C+ C C+ CP+ Y Q YR + Sbjct: 234 WEQMAAGCLSCCTCTYVCPTCHCYDIRDYQETEERTQRYRCWDSCMAKDFTLMAHGSPRK 293 Query: 211 QG-ERLDNL---------EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 ER E+ Y C C Q CP LN K ++ + + + Sbjct: 294 TKVERFRQRYMHKLVYFPENNDGEYACVGCGRCLQKCPVQLNIVKVAKALEKAEVKQDV 352 >gi|319900284|ref|YP_004160012.1| FAD linked oxidase domain protein [Bacteroides helcogenes P 36-108] gi|319415315|gb|ADV42426.1| FAD linked oxidase domain protein [Bacteroides helcogenes P 36-108] Length = 1076 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-- 219 +C+ C C +C S + L P + A R + + ++L L+ Sbjct: 658 CPPLAADKCIECGFCEVNCLSCGFT----LSPRQRIVAQREMSLLKQAGMKKQLAILQRQ 713 Query: 220 -DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 D C C+ SCP G+N I+ L + Sbjct: 714 YDYPGNQTCAGDGLCSMSCPMGINTGDLTHLIRQEALPKG 753 >gi|257789998|ref|YP_003180604.1| aldo/keto reductase [Eggerthella lenta DSM 2243] gi|325830124|ref|ZP_08163581.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|257473895|gb|ACV54215.1| aldo/keto reductase [Eggerthella lenta DSM 2243] gi|325487591|gb|EGC90029.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 375 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 7/122 (5%) Query: 128 DMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 MS+ +++ + ++ L + + + C C C CP Sbjct: 252 GMSNLDQVRQNVADYQANRPFSPEEQQALDAAVETLRGMASVPCTNCRYCVKDCPQGVV- 310 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + L + ++RD +G P C C CP+G++ Sbjct: 311 ----IPTILGLLNLELMTENRDFAKG-LYSWQAAPGPASSCIACGACEAMCPQGIDIVHQ 365 Query: 247 IA 248 + Sbjct: 366 LE 367 >gi|255099669|ref|ZP_05328646.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-63q42] Length = 304 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP + + P L ++ + + + L++ +++ C Sbjct: 178 CFKCGKCVKYCPGNAILGNYDMNPKKCL---SYITQKKGDLSEKEKVVLKNGKKVFGCDI 234 Query: 230 IMNCTQSCPKGLN-PAKAIAKIKMMLLD 256 C + CP + P I + K ++D Sbjct: 235 ---CQEVCPHNVEIPTTHILEFKENIID 259 >gi|156554419|ref|XP_001603649.1| PREDICTED: similar to Gb1-cadherin [Nasonia vitripennis] Length = 1500 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 17 IWNAPTGEKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL 76 IW+ N+ E + ++ D G P TY +D+D +L + + Sbjct: 734 IWDENQDPGNITELKARDYDSDENGPPF--TYKIDIDLADSTILSNFEIRGKDLYAKVRF 791 Query: 77 RRSCREGICGSCGMNIDGTNTLACVKD 103 R R+ + +G+ L Sbjct: 792 DREERKSYDIPVAITDNGSPPLTGTSK 818 >gi|126698142|ref|YP_001087039.1| putative iron-sulfur cluster protein [Clostridium difficile 630] gi|255305552|ref|ZP_05349724.1| putative iron-sulfur cluster protein [Clostridium difficile ATCC 43255] gi|115249579|emb|CAJ67396.1| putative iron-sulfur cluster-binding protein [Clostridium difficile] Length = 304 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP + + P L ++ + + + L++ +++ C Sbjct: 178 CFKCGKCVKYCPGNAILGNYDMNPKKCL---SYITQKKGDLSEKEKVVLKNGKKVFGCDI 234 Query: 230 IMNCTQSCPKGLN-PAKAIAKIKMMLLD 256 C + CP + P I + K ++D Sbjct: 235 ---CQEVCPHNVEIPTTHILEFKENIID 259 >gi|154246659|ref|YP_001417617.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160744|gb|ABS67960.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 491 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 13/89 (14%) Query: 162 QKIDGLYECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQ--GE 213 + C+ C + CPSY D+ + A++ L D D Sbjct: 63 NYAKAVAVCMHSRDCRNTGKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFADP 122 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 RLD D C + C + CP ++ Sbjct: 123 RLDAAMD-----LCVSCKACKKECPSAVD 146 >gi|332668414|ref|YP_004451202.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Haliscomenobacter hydrossis DSM 1100] gi|332337228|gb|AEE54329.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Haliscomenobacter hydrossis DSM 1100] Length = 1182 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 24/104 (23%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL-----------GPAILLQAYR 201 ++ D + C+ C CS CP + ++ P+ + A Sbjct: 671 WEKRNISDLIPLWEPDLCIQCGNCSFVCP-HSVIRSKFYHEDHLQQAPEGFPSAPINARG 729 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + + C C ++CP +PA Sbjct: 730 F---PETRYTLQVY--------VEDCTGCNLCVEACPAH-DPAD 761 >gi|328470297|gb|EGF41208.1| formate dehydrogenase, alpha subunit [Vibrio parahaemolyticus 10329] Length = 1387 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 32/109 (29%), Gaps = 14/109 (12%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQ 198 + WL + + C+ C C +C + ++ Sbjct: 575 QDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLSFVSDKNGRP 634 Query: 199 AYRWLIDSRDEFQGER-------LDNLEDPFRLYRCHTIMNCTQSCPKG 240 A R D R F+ + L + D +C C Q+CP G Sbjct: 635 ALR--PDDRPRFRSDEKGVGCSGLTLMGDS----KCVQCGACVQACPTG 677 >gi|327334732|gb|EGE76443.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL097PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|327329119|gb|EGE70879.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL103PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|317489444|ref|ZP_07947954.1| aldo/keto reductase [Eggerthella sp. 1_3_56FAA] gi|316911373|gb|EFV32972.1| aldo/keto reductase [Eggerthella sp. 1_3_56FAA] Length = 375 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 7/122 (5%) Query: 128 DMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 MS+ +++ + ++ L + + + C C C CP Sbjct: 252 GMSNLDQVRQNVADYQANRPFSPEEQQALDAAVETLRGMASVPCTNCRYCVKDCPQGVV- 310 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + + L + ++RD +G P C C CP+G++ Sbjct: 311 ----IPTILGLLNLELMTENRDFAKG-LYSWQAAPGPASSCIACGACEAMCPQGIDIVHQ 365 Query: 247 IA 248 + Sbjct: 366 LE 367 >gi|315078795|gb|EFT50817.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL053PA2] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|314959338|gb|EFT03440.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL002PA1] Length = 1022 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|314930739|gb|EFS94570.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL067PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|314926391|gb|EFS90222.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL036PA3] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|313828940|gb|EFS66654.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL063PA2] gi|314922499|gb|EFS86330.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL001PA1] gi|314965576|gb|EFT09675.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL082PA2] gi|314969208|gb|EFT13306.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL037PA1] gi|315094327|gb|EFT66303.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL060PA1] gi|315105051|gb|EFT77027.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL050PA2] gi|315109949|gb|EFT81925.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL030PA2] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|313826367|gb|EFS64081.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL063PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|313815600|gb|EFS53314.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL059PA1] gi|314916398|gb|EFS80229.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL005PA4] gi|314917238|gb|EFS81069.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL050PA1] gi|314921613|gb|EFS85444.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL050PA3] gi|314955141|gb|EFS99546.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL027PA1] gi|315099590|gb|EFT71566.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL059PA2] gi|315102179|gb|EFT74155.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL046PA1] gi|327454430|gb|EGF01085.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL087PA3] gi|327456497|gb|EGF03152.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL083PA2] gi|328756190|gb|EGF69806.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL087PA1] gi|328758572|gb|EGF72188.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL025PA2] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|313814048|gb|EFS51762.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL025PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|313764838|gb|EFS36202.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL013PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|289427517|ref|ZP_06429230.1| pyruvate synthase [Propionibacterium acnes J165] gi|289159447|gb|EFD07638.1| pyruvate synthase [Propionibacterium acnes J165] gi|313807033|gb|EFS45531.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL087PA2] gi|313817818|gb|EFS55532.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL046PA2] gi|313821356|gb|EFS59070.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL036PA1] gi|313824703|gb|EFS62417.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL036PA2] gi|314961510|gb|EFT05611.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL002PA2] gi|314980077|gb|EFT24171.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL072PA2] gi|314986931|gb|EFT31023.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL005PA2] gi|314990576|gb|EFT34667.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL005PA3] gi|315082954|gb|EFT54930.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL027PA2] gi|315086474|gb|EFT58450.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL002PA3] gi|315088188|gb|EFT60164.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL072PA1] gi|327333849|gb|EGE75566.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL096PA3] gi|327444682|gb|EGE91336.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL013PA2] gi|328758187|gb|EGF71803.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL020PA1] gi|332674563|gb|AEE71379.1| pyruvate-flavodoxin oxidoreductase [Propionibacterium acnes 266] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|289424274|ref|ZP_06426057.1| pyruvate synthase [Propionibacterium acnes SK187] gi|289154971|gb|EFD03653.1| pyruvate synthase [Propionibacterium acnes SK187] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|229015909|ref|ZP_04172873.1| formate dehydrogenase [Bacillus cereus AH1273] gi|229022131|ref|ZP_04178682.1| formate dehydrogenase [Bacillus cereus AH1272] gi|228739132|gb|EEL89577.1| formate dehydrogenase [Bacillus cereus AH1272] gi|228745366|gb|EEL95404.1| formate dehydrogenase [Bacillus cereus AH1273] Length = 971 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + ++G AC K+ + L + + + + Sbjct: 38 QTCDTCIVEVNGKLLRACSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNN 97 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 98 NGNCKVHNTVHMMEIEEQKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQV 157 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + ++ R + D+ + D C + C CP Sbjct: 158 NETLSIDWSLDRP--RVIWDNGVS--------INDS----SCVSCGQCVTVCP 196 >gi|257052545|ref|YP_003130378.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Halorhabdus utahensis DSM 12940] gi|256691308|gb|ACV11645.1| glycerol-3-phosphate dehydrogenase, anaerobic, C subunit [Halorhabdus utahensis DSM 12940] Length = 459 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 10/83 (12%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + G C C CP N D + GP ++++ + +E Sbjct: 38 EMDLRAGADNCTKVGTCDAECPVAEVNDD-FPGPQ---------FQGPEQWRLSQKGEVE 87 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 + C + C CP G+ Sbjct: 88 IDDSITECSNCLQCDSGCPSGVP 110 >gi|295129727|ref|YP_003580390.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes SK137] gi|291376756|gb|ADE00611.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes SK137] gi|313772691|gb|EFS38657.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL074PA1] gi|313811172|gb|EFS48886.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL083PA1] gi|313832173|gb|EFS69887.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL007PA1] gi|313834334|gb|EFS72048.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL056PA1] gi|313839447|gb|EFS77161.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL086PA1] gi|314974431|gb|EFT18526.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL053PA1] gi|314977380|gb|EFT21475.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL045PA1] gi|314985427|gb|EFT29519.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL005PA1] gi|315097262|gb|EFT69238.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL038PA1] gi|327331223|gb|EGE72962.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL096PA2] gi|327447404|gb|EGE94058.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL043PA1] gi|327450411|gb|EGE97065.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL043PA2] gi|328759537|gb|EGF73143.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL099PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|217974489|ref|YP_002359240.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] gi|217499624|gb|ACK47817.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] Length = 490 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL + Sbjct: 225 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQETNLRE 284 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 285 SN-LGDCVDCNLCVEVCPTGIDI 306 >gi|152999560|ref|YP_001365241.1| cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella baltica OS185] gi|151364178|gb|ABS07178.1| Cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella baltica OS185] Length = 490 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL + Sbjct: 225 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQETNLRE 284 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 285 SN-LGDCVDCNLCVEVCPTGIDI 306 >gi|114797401|ref|YP_759946.1| cytochrome c oxidase accessory protein FixG [Hyphomonas neptunium ATCC 15444] gi|114737575|gb|ABI75700.1| cytochrome c oxidase accessory protein FixG [Hyphomonas neptunium ATCC 15444] Length = 490 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C+ CP A+ + YR+ D + R D + Sbjct: 218 YALAGTMREQVCTYLCPWPRIQGALTDEHALNVT-YRY--DRGEPRGPHRKD--QSWEGR 272 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C Q CP G++ Sbjct: 273 GDCIDCKQCVQVCPMGIDIRD 293 >gi|104780949|ref|YP_607447.1| oxidase [Pseudomonas entomophila L48] gi|95109936|emb|CAK14641.1| putative oxidase with iron-sulfur cluster [Pseudomonas entomophila L48] Length = 471 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R +++ L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGETRGPRKKDIDYKAKGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|50843378|ref|YP_056605.1| NADH dehydrogenase subunit I [Propionibacterium acnes KPA171202] gi|289426989|ref|ZP_06428708.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes J165] gi|295131452|ref|YP_003582115.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes SK137] gi|81692381|sp|Q6A6G6|NUOI_PROAC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|50840980|gb|AAT83647.1| NADH dehydrogenase I chain I [Propionibacterium acnes KPA171202] gi|289159811|gb|EFD07996.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes J165] gi|291377349|gb|ADE01204.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes SK137] gi|313763292|gb|EFS34656.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL013PA1] gi|313773338|gb|EFS39304.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL074PA1] gi|313793600|gb|EFS41640.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL110PA1] gi|313802889|gb|EFS44102.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL110PA2] gi|313806335|gb|EFS44851.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL087PA2] gi|313810759|gb|EFS48473.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL083PA1] gi|313813682|gb|EFS51396.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL025PA1] gi|313814968|gb|EFS52682.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL059PA1] gi|313819446|gb|EFS57160.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL046PA2] gi|313821252|gb|EFS58966.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL036PA1] gi|313822293|gb|EFS60007.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL036PA2] gi|313826149|gb|EFS63863.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL063PA1] gi|313829362|gb|EFS67076.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL063PA2] gi|313831070|gb|EFS68784.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL007PA1] gi|313833200|gb|EFS70914.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL056PA1] gi|313838157|gb|EFS75871.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL086PA1] gi|314916746|gb|EFS80577.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL005PA4] gi|314919128|gb|EFS82959.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL050PA1] gi|314921208|gb|EFS85039.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL050PA3] gi|314925998|gb|EFS89829.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL036PA3] gi|314930364|gb|EFS94195.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL067PA1] gi|314956147|gb|EFT00543.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL027PA1] gi|314959680|gb|EFT03782.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL002PA1] gi|314962254|gb|EFT06355.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL002PA2] gi|314963232|gb|EFT07332.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL082PA1] gi|314969775|gb|EFT13873.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL037PA1] gi|314973946|gb|EFT18042.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL053PA1] gi|314976874|gb|EFT20969.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL045PA1] gi|314979339|gb|EFT23433.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL072PA2] gi|314984996|gb|EFT29088.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL005PA1] gi|314986329|gb|EFT30421.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL005PA2] gi|314988574|gb|EFT32665.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL005PA3] gi|315079691|gb|EFT51679.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL053PA2] gi|315081019|gb|EFT52995.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL078PA1] gi|315083918|gb|EFT55894.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL027PA2] gi|315085055|gb|EFT57031.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL002PA3] gi|315089484|gb|EFT61460.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL072PA1] gi|315097697|gb|EFT69673.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL038PA1] gi|315098096|gb|EFT70072.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL059PA2] gi|315102686|gb|EFT74662.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL046PA1] gi|315107934|gb|EFT79910.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL030PA1] gi|315108828|gb|EFT80804.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL030PA2] gi|327325717|gb|EGE67514.1| NADH-quinone oxidoreductase, I subunit [Propionibacterium acnes HL096PA3] gi|327330835|gb|EGE72580.1| NADH-quinone oxidoreductase, I subunit [Propionibacterium acnes HL096PA2] gi|327333130|gb|EGE74857.1| NADH-quinone oxidoreductase, I subunit [Propionibacterium acnes HL097PA1] gi|327442872|gb|EGE89526.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL043PA2] gi|327445264|gb|EGE91918.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL043PA1] gi|327447750|gb|EGE94404.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL013PA2] gi|327451639|gb|EGE98293.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL087PA3] gi|327452292|gb|EGE98946.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL083PA2] gi|327452509|gb|EGE99163.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL092PA1] gi|328752125|gb|EGF65741.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL025PA2] gi|328755069|gb|EGF68685.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL020PA1] gi|328757017|gb|EGF70633.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL087PA1] gi|328761553|gb|EGF75071.1| NADH-quinone oxidoreductase, I subunit [Propionibacterium acnes HL099PA1] gi|332676321|gb|AEE73137.1| NADH-quinone oxidoreductase subunit I [Propionibacterium acnes 266] Length = 198 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + + K + H+ + DGL +CV C C+ Sbjct: 1 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW 60 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQ 235 +CP+ + D+ DE + GER + + L RC C + Sbjct: 61 ACPADAIYVEG--------------ADNTDEERYSPGERYGRVYEINYL-RCILCGMCIE 105 Query: 236 SCP 238 +CP Sbjct: 106 ACP 108 >gi|50841650|ref|YP_054877.1| pyruvate-flavodoxin oxidoreductase [Propionibacterium acnes KPA171202] gi|50839252|gb|AAT81919.1| pyruvate-flavodoxin oxidoreductase [Propionibacterium acnes KPA171202] gi|313792725|gb|EFS40806.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL110PA1] gi|313803389|gb|EFS44571.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL110PA2] gi|314964099|gb|EFT08199.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL082PA1] gi|315081730|gb|EFT53706.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL078PA1] gi|315107546|gb|EFT79522.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL030PA1] gi|327457234|gb|EGF03889.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Propionibacterium acnes HL092PA1] Length = 1204 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 25/93 (26%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-----R 214 D C+ C C+ CP + +Y S+ E E Sbjct: 688 DVIATWEPNACIQCGNCAFVCP-HGVIRSKYY------------PQSQLEGAPESFQSAE 734 Query: 215 LDNLEDPFRLYR-------CHTIMNCTQSCPKG 240 L+ P Y C C ++CP Sbjct: 735 LNAAGLPESCYTLQVVPDQCTGCGLCVEACPAH 767 >gi|318041114|ref|ZP_07973070.1| pyruvate oxidoreductase [Synechococcus sp. CB0101] Length = 1180 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 5/93 (5%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLID 205 ++ ++ ++ + CV C C CP A + +R Sbjct: 674 TATSQWEKRNIAEQVPVWEPDLCVQCGKCVMVCPHAVIRAKVAEPEALAAAPEGFRSAPA 733 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + G+R C C + CP Sbjct: 734 RDAHWSGQRFTIQVSAE---DCTGCNLCVEVCP 763 >gi|308152250|emb|CBI83544.1| NUIM (TYKY) subunit of mitochondrial NADH:ubiquinone oxidoreductase (complex I) [Pichia pastoris] gi|328353143|emb|CCA39541.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Pichia pastoris CBS 7435] Length = 222 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + L + + ++ + + H R+ G C+ C C Sbjct: 75 EIFRGLYITLEMYFR--APYTIYYPFEKGPVSPRFRGEHALRRYPSGEERCIACKLCEAV 132 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 133 CPAQAITIEAEERIDGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 174 Query: 240 G 240 Sbjct: 175 D 175 >gi|299135121|ref|ZP_07028312.1| molybdopterin oxidoreductase Fe4S4 region [Afipia sp. 1NLS2] gi|298590098|gb|EFI50302.1| molybdopterin oxidoreductase Fe4S4 region [Afipia sp. 1NLS2] Length = 308 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 H E S + ++ + +C++C C +C + W N Sbjct: 133 DVHEPGEHHTGNGSVAASMAQPDKIDNDLYVREYDKCILCYKCVDACGTQWQN------- 185 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + +Q DS+ + +E P C NC + CP G Sbjct: 186 SFAIQIAGRGFDSQISTE----FAVELPES--ACVFCGNCVEVCPTG 226 >gi|289806364|ref|ZP_06536993.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 92 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 10/34 (29%) Query: 221 PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C +CP + I + + Sbjct: 4 DEALKYCINCKRCEVACPSDVKIGDIIQRARAKY 37 >gi|222110218|ref|YP_002552482.1| cytochrome c oxidase accessory protein ccog [Acidovorax ebreus TPSY] gi|221729662|gb|ACM32482.1| cytochrome c oxidase accessory protein CcoG [Acidovorax ebreus TPSY] Length = 480 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 7/78 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLEDPF-RLY 225 + C CP Y L+ +Y D R E +G R ++ L Sbjct: 219 AGFLREQVCKYMCP-YARFQSAMFDRDTLVVSY----DPERGEPRGPRNKTVDHKAAGLG 273 Query: 226 RCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 274 DCIDCTLCVQVCPTGIDI 291 >gi|157273354|gb|ABV27253.1| NADH-quinone oxidoreductase subunit 9 [Candidatus Chloracidobacterium thermophilum] Length = 168 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 H + +G CV C C+ +CP+ + +D L P + E + Sbjct: 49 FRGEHYLARDENGKERCVACFLCAAACPADAIYIEADEDLRP--------YEERPGVEPR 100 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R+ N++ RC C ++CPK Sbjct: 101 YARVYNID----YGRCILCGYCVEACPKD 125 >gi|332881561|ref|ZP_08449210.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680559|gb|EGJ53507.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 165 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 14/108 (12%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 F + P + + + E + CV C C +CP + Sbjct: 29 FFRKKVTEQYPENRHTTLYIPERHRAQLEMIHNDRNQHHCVACGLCQMACP------NDT 82 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + ++ D ++ + + L C C +CP Sbjct: 83 IRVVSEVR--------EDAEGKKKKYLVRYEYDLGSCMFCQLCVNACP 122 >gi|323526345|ref|YP_004228498.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] gi|323383347|gb|ADX55438.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] Length = 985 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 33/133 (24%), Gaps = 9/133 (6%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P + VV+ R + S E + C+ C Sbjct: 498 PANRLNPGKVVEAYRADENLRMGPSYRPVKLTTKLTF--ASREGDGLQRAVERCIGMGKC 555 Query: 177 ST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM 231 + CPS+ + ++ E + +LE L C Sbjct: 556 RSLSGGTMCPSFRATREEKHSTRGRAHLLWEMLQG--EIITDGWKSLEVKEALDGCLACK 613 Query: 232 NCTQSCPKGLNPA 244 C CP + A Sbjct: 614 GCKSDCPTHTDIA 626 >gi|269119252|ref|YP_003307429.1| hydrogenase, Fe-only [Sebaldella termitidis ATCC 33386] gi|268613130|gb|ACZ07498.1| hydrogenase, Fe-only [Sebaldella termitidis ATCC 33386] Length = 587 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 41/163 (25%), Gaps = 17/163 (10%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 R + SC ++ + I + L LV S Sbjct: 63 GRRNLAPSCATPVNEGMIVKTNTIKALNSRKIVLELLLSDHPKDCLVCQKSGECELQDLA 122 Query: 140 EPWLKTV-SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + + + + + I + +C+MC C T C Sbjct: 123 HEFGIKEIAYEGKESTYRKDISKSIIRDMDKCIMCRRCETMCNEVQTVG----------- 171 Query: 199 AYRWLIDSRDEFQGERLDN-LEDPFRLYRCHTIMNCTQSCPKG 240 A + D ++ L D C C CP G Sbjct: 172 ALSGVNRGFDAVVAPAMEMDLNDSV----CTYCGQCVAVCPTG 210 >gi|266621505|ref|ZP_06114440.1| oxidoreductase [Clostridium hathewayi DSM 13479] gi|288866826|gb|EFC99124.1| oxidoreductase [Clostridium hathewayi DSM 13479] Length = 377 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 7/123 (5%) Query: 128 DMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 MS F +I + + K + + + D C C C + CP Sbjct: 254 GMSDFRQLQENIHTFEEDKPLQKEEMDTVLAIADEMLKKSALPCTACRYCVSHCP----- 308 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 + PA+L L + + C +C CP+ + ++A Sbjct: 309 -KQLDIPALLELYNEHCFTGGGFLAPMALMAVPEDKHPDACIGCRSCEAVCPQQIKISEA 367 Query: 247 IAK 249 +A Sbjct: 368 MAD 370 >gi|197103274|ref|YP_002128652.1| pyruvate:ferredoxin oxidoreductase [Phenylobacterium zucineum HLK1] gi|196480550|gb|ACG80077.1| pyruvate:ferredoxin oxidoreductase [Phenylobacterium zucineum HLK1] Length = 1203 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 25/95 (26%), Gaps = 10/95 (10%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D C+ C C +CP + Y A+ + + + Sbjct: 689 DVVASWDPDLCIQCGQCGFACPHSVIRAKYYDEGALAKAPAGFKSAPVNTRGNPNVRFSL 748 Query: 220 DPFRLYRCHTIMNCTQSCPKG---------LNPAK 245 + + L C C + CP +N Sbjct: 749 EVY-LEDCTGCGVCVEVCPAHSPLEPDKKAINLTD 782 >gi|127512479|ref|YP_001093676.1| FAD linked oxidase domain-containing protein [Shewanella loihica PV-4] gi|126637774|gb|ABO23417.1| FAD linked oxidase domain protein [Shewanella loihica PV-4] Length = 1026 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 31/135 (22%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST------SCPSYWWNSDRYLGPAI 195 + + + A + R+ + C C CPS+ DR P Sbjct: 551 YNVDSTKRGAFDRQIPVNTREAFPDVMNCNGNGLCFNYSVYSPMCPSFKVTGDRVQSPKG 610 Query: 196 LLQAYR-----------------------WLIDSRDEFQGERLDNLEDP--FRLYRCHTI 230 R WL +++ + ER + L C Sbjct: 611 RAGLMREWLRLLEAEGVDVEALAKAKPLGWLQRTQNTLKKEREYDYSHEVMESLKGCLAC 670 Query: 231 MNCTQSCPKGLNPAK 245 C+ CP ++ K Sbjct: 671 KACSSQCPVKVDVPK 685 >gi|302327043|gb|ADL26244.1| NADH-quinone oxidoreductase, I subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 180 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 20/99 (20%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY--LGPAILLQAYR 201 P+ H + DG CV C C+ +CP++ + P I + R Sbjct: 39 PEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEKRVMR 98 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ID C C ++CP Sbjct: 99 FDIDHL------------------TCVFCGLCAEACPVD 119 >gi|283955064|ref|ZP_06372567.1| LOW QUALITY PROTEIN: hypothetical protein C414_000390044 [Campylobacter jejuni subsp. jejuni 414] gi|283793431|gb|EFC32197.1| LOW QUALITY PROTEIN: hypothetical protein C414_000390044 [Campylobacter jejuni subsp. jejuni 414] Length = 357 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 66/203 (32%), Gaps = 14/203 (6%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ Y + D LL + D + E Sbjct: 2 KKLELRIFRFDKTKDYEAYYKPYVYNNYENFASFYDLLLQV---QDDDIYFDFDKDENT- 57 Query: 86 GSCGMNIDGTNT---LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + ++ + K+ + + PL IKDL++D + F +++ +E + Sbjct: 58 ---YIVVNKQIIPLFTPLEEVAKEFDFNLCIEPLSTKRAIKDLIIDKNDFLDKYKYLEKF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP----AILLQ 198 K + + + + + + + ++ + A + Sbjct: 115 GNEEDKKLYTKYDYLYYASEILHYHPDYMGNGVFYLASKMIEKYPEKKIEILKTLADKKK 174 Query: 199 AYRWLIDSRDEFQGERLDNLEDP 221 + ++S++E + NL++ Sbjct: 175 GIFYHLESKNEILETTIKNLQNE 197 >gi|317152496|ref|YP_004120544.1| Formate dehydrogenase [Desulfovibrio aespoeensis Aspo-2] gi|316942747|gb|ADU61798.1| Formate dehydrogenase [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 18/93 (19%) Query: 166 GLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 L CV C C +CP + +Y+ A + + D+ + Sbjct: 252 YLAGCVNCYNCRVACPVCYCKECVFNTDVFEHKPWQYVEWAKRKGSLKMPTDT-IFYHLT 310 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ ++ C C+ +CP + + Sbjct: 311 RMAHMSM-----ACVGCGQCSNACPNDIPVMEL 338 >gi|254786943|ref|YP_003074372.1| cytochrome C oxidase accessory protein CcoG [Teredinibacter turnerae T7901] gi|237683866|gb|ACR11130.1| cytochrome c oxidase accessory protein CcoG [Teredinibacter turnerae T7901] Length = 477 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 3/82 (3%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 + C CP + S Y + + + R + + L C Sbjct: 218 AGYMREQVCKYMCPYARFQSVMYDNNTLAVYYDVARGEPRGARKPKDDPK---EKGLGDC 274 Query: 228 HTIMNCTQSCPKGLNPAKAIAK 249 C Q CP ++ + Sbjct: 275 TDCSWCVQVCPVDIDIRDGLQY 296 >gi|186470171|gb|AAY57574.2| HoxU [Lyngbya majuscula CCAP 1446/4] Length = 238 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 43/165 (26%), Gaps = 19/165 (11%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 + +C + + + V L V +S+ + + + Sbjct: 56 GINRLLPACVTEVAEGMEVTTHTPQLQDYRKMVVELL-FSEGNHFCAVCVSNGNCELQDV 114 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDG---LYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + D C++C C C Sbjct: 115 AIEVGMDHTRFPYIFPKREVDISHTQFGIDHNRCILCTRCVRVCDEIE------------ 162 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKG 240 A+ W + R + + L P+ + C + C +CP G Sbjct: 163 -GAHVWDVAGR-GADAKVITGLNQPWGQVSACTSCGKCVDACPTG 205 >gi|126729567|ref|ZP_01745380.1| NADH dehydrogenase subunit I [Sagittula stellata E-37] gi|126709686|gb|EBA08739.1| NADH dehydrogenase subunit I [Sagittula stellata E-37] Length = 164 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 24/121 (19%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 +K + M +F++ ++ + H R+ +G C+ C C CP Sbjct: 19 MKGFQLGMKYFFAPKATVNY--PHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICP 76 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPK 239 + QA + RD+ R D C C ++CP Sbjct: 77 A---------------QAITIDAEPRDDGSRRTTRYDIDMTK-----CIYCGFCQEACPV 116 Query: 240 G 240 Sbjct: 117 D 117 >gi|291245007|ref|XP_002742384.1| PREDICTED: NADH dehydrogenase iron-sulfur protein 8, mitochondrial-like [Saccoglossus kowalevskii] Length = 207 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L + +S+ + + +I+ + + H R+ G C+ C C Sbjct: 60 ELMRGLAMTLSYMFREPATIQYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCEAI 117 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 118 CPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGYCQEACPV 159 Query: 240 G 240 Sbjct: 160 D 160 >gi|317178009|dbj|BAJ55798.1| NADH dehydrogenase subunit G [Helicobacter pylori F16] Length = 844 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|315161806|gb|EFU05823.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecalis TX0645] Length = 1177 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 11/82 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYW----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C MC C+ CP + L A + A R + + + Sbjct: 684 PEWQMDKCTMCNECAFVCPHAAIRPFLADEEELKEAPVGFAMREM-----RGTDGLMYRI 738 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 + F L C C Q+CP Sbjct: 739 Q--FSLEDCTGCGLCVQACPVK 758 >gi|330935903|ref|XP_003305174.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] gi|311317931|gb|EFQ86730.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] Length = 230 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + V + F+ + + H R+ G C+ C C Sbjct: 82 MEMFRGMYVSLEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEA 139 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID +C C +SCP Sbjct: 140 ICPAQAITIEAEERMDGSRRTTRYDIDMT------------------KCIYCGLCQESCP 181 Query: 239 KG 240 Sbjct: 182 VD 183 >gi|291280349|ref|YP_003497184.1| NADH-quinone oxidoreductase subunit I [Deferribacter desulfuricans SSM1] gi|290755051|dbj|BAI81428.1| NADH-quinone oxidoreductase, I subunit [Deferribacter desulfuricans SSM1] Length = 153 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 20/123 (16%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +++ + V + H + + + + + H + DG +CV C C Sbjct: 13 FTEILQGMGVTLKHMFK--KPVTYKYPYEATPIFERFRGVHYMKTDEDGNPKCVGCYLCE 70 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CPS + + GP ++ I+ L RC C ++C Sbjct: 71 RVCPSECIHIETDAGPNGERLIRKYEIE------------------LDRCIYCGFCEEAC 112 Query: 238 PKG 240 P Sbjct: 113 PVD 115 >gi|268678727|ref|YP_003303158.1| cytochrome C oxidase accessory protein CcoG [Sulfurospirillum deleyianum DSM 6946] gi|268616758|gb|ACZ11123.1| cytochrome c oxidase accessory protein CcoG [Sulfurospirillum deleyianum DSM 6946] Length = 452 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 41/141 (29%), Gaps = 12/141 (8%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P + + L + + + + + P+ + L + + + G + Sbjct: 120 EPQEGYLLKRILAILLWTMLASLAASNFLWYFIPPEDFFQYLTNPLEHTIMYGFLLGITA 179 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE-RLDNLEDPFRL-------- 224 + N Y+ P +Q+ + + E R + +P + Sbjct: 180 FLVYDVV-ALKENFCVYICPYSRIQSALFDEHTLQTIYNEKRGGQIYNPQGIKLGSKPPL 238 Query: 225 --YRCHTIMNCTQSCPKGLNP 243 C C + CP ++ Sbjct: 239 VTDDCTGCEACVRVCPTHIDI 259 >gi|118602131|ref|YP_903346.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567070|gb|ABL01875.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 464 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 11/82 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE---RLDNLEDP 221 + C CP Y + + ++ + D ++GE RL E Sbjct: 204 YVFAGFMREQTCLWICP--------YARIQGAMVDDQSILPTYDHYRGEQRGRLKRGEFV 255 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 256 EGFGDCIDCHQCVAVCPTGVDI 277 >gi|120610212|ref|YP_969890.1| 4Fe-4S ferredoxin [Acidovorax citrulli AAC00-1] gi|120588676|gb|ABM32116.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax citrulli AAC00-1] Length = 499 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 5/77 (6%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYR 226 + C CP + S + +++ ++R E +G R +++ L Sbjct: 238 AGFLREQVCKYMCPYARFQSAMFDKDTLIVT----YDEARGEPRGPRNKSVDHRARGLGD 293 Query: 227 CHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 294 CIDCTLCVQVCPVGIDI 310 >gi|126173201|ref|YP_001049350.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125996406|gb|ABN60481.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 490 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL + Sbjct: 225 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQETNLRE 284 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 285 SN-LGDCVDCNLCVEVCPTGIDI 306 >gi|304410442|ref|ZP_07392060.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS183] gi|307304534|ref|ZP_07584284.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica BA175] gi|304350926|gb|EFM15326.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS183] gi|306911936|gb|EFN42360.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica BA175] Length = 490 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL + Sbjct: 225 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQETNLRE 284 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 285 SN-LGDCVDCNLCVEVCPTGIDI 306 >gi|297158296|gb|ADI08008.1| oxidoreductase [Streptomyces bingchenggensis BCW-1] Length = 971 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 10/117 (8%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWW 185 + + E H++ + CV A C CPSY Sbjct: 523 QRMEENLRFAVLPRRPVDVEFGYPHDNGDFSAAVRRCVGVAKCRNESVSGASVMCPSYRA 582 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++ G R + + L C + C CP G++ Sbjct: 583 TGEEQHSTRGRARLLHEMLAGEVVRDGWRSEEVRGA--LDLCLSCKGCRSDCPVGVD 637 >gi|86361232|ref|YP_473119.1| ferrodoxin oxidase protein [Rhizobium etli CFN 42] gi|86285334|gb|ABC94392.1| ferrodoxin oxidase protein [Rhizobium etli CFN 42] Length = 522 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 5/82 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-R 223 L + C+ CP L L+ Y D R E + + Sbjct: 222 YVLGGLMREQVCTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHAKKAQAQGLP 277 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 + C C CP G++ Sbjct: 278 VGDCVDCNACVAVCPMGIDIRD 299 >gi|330504281|ref|YP_004381150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] gi|328918567|gb|AEB59398.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] Length = 470 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP + S + I A R R D L C C Sbjct: 222 CRDMCPYSRFQSVMFDSDTLVISYDAARGEN-----RGPRRKDADYKAEGLGDCIDCTVC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|298384458|ref|ZP_06994018.1| hydrogenase [Bacteroides sp. 1_1_14] gi|298262737|gb|EFI05601.1| hydrogenase [Bacteroides sp. 1_1_14] Length = 588 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 44/174 (25%), Gaps = 30/174 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFY----- 133 C C + + G LA + + + + V+ +L++ Sbjct: 52 ASCRICVVEVAGRRNLAPACATRCTEGMVVKTSTLRVMNARKVVAELILSDHPNDCLTCP 111 Query: 134 -------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + + + +C+ C C + C Sbjct: 112 KCGNCELQTLALRFNIREMPFNGGELSPRKREVTSSIVRNMDKCIFCRRCESVCNDVQTV 171 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L A R ++ +R+ ++D C C CP G Sbjct: 172 G--------ALGAIRRGFNTTIAPAFDRM--MKDSE----CTYCGQCVAVCPVG 211 >gi|239904887|ref|YP_002951625.1| Fe hydrogenase [Desulfovibrio magneticus RS-1] gi|239794750|dbj|BAH73739.1| Fe hydrogenase [Desulfovibrio magneticus RS-1] Length = 585 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 47/178 (26%), Gaps = 34/178 (19%) Query: 81 REGICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVI---------KDLVV 127 + C C + ++G LA + + + L + KD +V Sbjct: 48 KAASCRICVVEVEGRRNLAPACATPATDGMVVKSNTLRVLNARKTVLELLLSDHPKDCLV 107 Query: 128 D-MSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYW 184 S E + SP E+ +D + +C+MC C T C Sbjct: 108 CAKSGECELQDLAEKFGIRESPYDGGEMSHYRKDVSPSIIRDMDKCIMCRRCETMCNDIQ 167 Query: 185 WNS--DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A + ++ D C C CP G Sbjct: 168 TCGVLSGVNRGFTAVVAPAFEMNLADTV----------------CTNCGQCVAVCPVG 209 >gi|218780673|ref|YP_002431991.1| hypothetical protein Dalk_2833 [Desulfatibacillum alkenivorans AK-01] gi|218762057|gb|ACL04523.1| Putative uncharacterized Fe-S oxidoreductase (contains cysteine-rich region domain) [Desulfatibacillum alkenivorans AK-01] Length = 347 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 207 RDEFQGERLDNLEDPFR--LYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 ++ + E L + L C T C + CP G +P I K++ L Sbjct: 30 QETARTEILKLADGEDSFVLRDCVTCYACEEYCPNGNHPFYLIVKMQEEL 79 >gi|254447723|ref|ZP_05061188.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium HTCC5015] gi|198262503|gb|EDY86783.1| cytochrome c oxidase accessory protein CcoG [gamma proteobacterium HTCC5015] Length = 473 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 37/117 (31%), Gaps = 7/117 (5%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ ++ + P +L G + C CP + S + Sbjct: 181 YNILITLSSSEYLLGPWETFWVLFY---ALATYGNAGFLREQVCLYMCPYARFQSVMFDS 237 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ++++ + R + + ER ++ C C Q CP G++ + Sbjct: 238 NSLIISYDEERGEPRMKGK-ERKQAGDNA---GDCVDCNMCVQVCPTGIDIRDGLQY 290 >gi|18978324|ref|NP_579681.1| hypothetical protein PF1952 [Pyrococcus furiosus DSM 3638] gi|18894154|gb|AAL82076.1| iron-sulfur protein [Pyrococcus furiosus DSM 3638] Length = 641 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 24/82 (29%), Gaps = 30/82 (36%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 YECV C C T CP D +R + +P + Sbjct: 581 RRAYECVGCGVCVTKCPKRAIEIDE-----------------------KRKKIIVNPEK- 616 Query: 225 YRCHTIMNCTQSCP----KGLN 242 C C + CP KG+ Sbjct: 617 --CIHCRECMEVCPLVVIKGIE 636 >gi|329957011|ref|ZP_08297579.1| glutamate synthase [Bacteroides clarus YIT 12056] gi|328523768|gb|EGF50860.1| glutamate synthase [Bacteroides clarus YIT 12056] Length = 768 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 23/202 (11%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + I G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITIGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + E+ +K Sbjct: 244 ---GHQVDFDEMLKRMGAFKNIEREEMHKLEEPQTCQATGENTPEEDEKSRNAAWRQELR 300 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 + +R P + + + SR E L + RC N Sbjct: 301 KSMKA-------KERTAIPRVEMNELDAEYRSHSRKEEVNRGLTEKQALTEAKRCLDCAN 353 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 CT+ CP G++ + I I+ Sbjct: 354 PGCTEGCPVGIDIPRFIKNIER 375 >gi|315654646|ref|ZP_07907552.1| D-lactate dehydrogenase [Mobiluncus curtisii ATCC 51333] gi|315491110|gb|EFU80729.1| D-lactate dehydrogenase [Mobiluncus curtisii ATCC 51333] Length = 983 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 17/98 (17%) Query: 156 QSHEDRQKIDGLYECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +D+ ++ C C CPSY + + + + Sbjct: 518 TFPKDKDFTAAVHRCTGVGKCLAMNQVKNAWMCPSYLATGQEKDATRGRARVLQEVTNG- 576 Query: 208 DEFQGERLDNLEDPF---RLYRCHTIMNCTQSCPKGLN 242 + N DP L C C+ +CP G++ Sbjct: 577 -----TLIKNFRDPNLLRALDLCLACKACSTACPTGID 609 >gi|295113549|emb|CBL32186.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Enterococcus sp. 7L76] Length = 1177 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYW----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C MC C+ CP + L A A R + + + Sbjct: 684 PEWQMDKCTMCNECAFVCPHAAIRPFLADEEELKEAPAGFAMREM-----RGTDGLMYRI 738 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 + F L C C Q+CP Sbjct: 739 Q--FSLEDCTGCGLCVQACPVK 758 >gi|124024377|ref|YP_001018684.1| NADH dehydrogenase subunit I [Prochlorococcus marinus str. MIT 9303] gi|156632624|sp|A2CD59|NDHI_PROM3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|123964663|gb|ABM79419.1| putative NADH Dehydrogenase subunit [Prochlorococcus marinus str. MIT 9303] Length = 218 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +I+ L V H + +++ + + P +E +C+ C C Sbjct: 19 ANYLIQGLAVTFDHLRRRPITVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|111017059|ref|YP_700031.1| ferredoxin [Rhodococcus jostii RHA1] gi|110816589|gb|ABG91873.1| probable ferredoxin [Rhodococcus jostii RHA1] Length = 385 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 22/104 (21%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW------------LIDSRDEF 210 D C+ C C+ CP+ + + + A RW + + Sbjct: 260 WEDVASRCLTCGNCTMVCPTCFCTTSEDVTDLTGEHAERWQHWSSCFEPDFSYVHGGNVR 319 Query: 211 QG----------ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA 244 +L D F C C CP G++ Sbjct: 320 TSGESRYRQWMSHKLGTWFDQFGSSGCVGCGRCIDWCPVGIDIT 363 >gi|254974163|ref|ZP_05270635.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-66c26] gi|255091564|ref|ZP_05321042.1| putative iron-sulfur cluster protein [Clostridium difficile CIP 107932] gi|255313290|ref|ZP_05354873.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-76w55] gi|255515981|ref|ZP_05383657.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-97b34] gi|255649072|ref|ZP_05395974.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-37x79] gi|260682263|ref|YP_003213548.1| putative iron-sulfur cluster protein [Clostridium difficile CD196] gi|260685862|ref|YP_003216995.1| putative iron-sulfur cluster protein [Clostridium difficile R20291] gi|306519186|ref|ZP_07405533.1| putative iron-sulfur cluster protein [Clostridium difficile QCD-32g58] gi|260208426|emb|CBA60979.1| putative iron-sulfur cluster protein [Clostridium difficile CD196] gi|260211878|emb|CBE02315.1| putative iron-sulfur cluster protein [Clostridium difficile R20291] Length = 304 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C C C CP + + P ++ + + + L++ +++ C Sbjct: 178 CFKCGKCVKYCPGNAILGNYDMNPKKC---LSYITQKKGDLSEKEKVVLKNGKKVFGCDI 234 Query: 230 IMNCTQSCPKGLN-PAKAIAKIKMMLLD 256 C + CP + P I + K ++D Sbjct: 235 ---CQEVCPHNVEMPTTHILEFKENIID 259 >gi|29345534|ref|NP_809037.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides thetaiotaomicron VPI-5482] gi|253571681|ref|ZP_04849087.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 1_1_6] gi|29337426|gb|AAO75231.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides thetaiotaomicron VPI-5482] gi|251838889|gb|EES66974.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 1_1_6] Length = 588 Score = 42.8 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 44/174 (25%), Gaps = 30/174 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFY----- 133 C C + + G LA + + + + V+ +L++ Sbjct: 52 ASCRICVVEVAGRRNLAPACATRCTEGMVVKTSTLRVMNARKVVAELILSDHPNDCLTCP 111 Query: 134 -------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + + + +C+ C C + C Sbjct: 112 KCGNCELQTLALRFNIREMPFNGGELSPRKREVTSSIVRNMDKCIFCRRCESVCNDVQTV 171 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L A R ++ +R+ ++D C C CP G Sbjct: 172 G--------ALGAIRRGFNTTIAPAFDRM--MKDSE----CTYCGQCVAVCPVG 211 >gi|330465210|ref|YP_004402953.1| NADH dehydrogenase subunit I [Verrucosispora maris AB-18-032] gi|328808181|gb|AEB42353.1| NADH dehydrogenase subunit I [Verrucosispora maris AB-18-032] Length = 213 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 14/117 (11%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 K V SH + + + + +P P + DGL +C+ C C+ +CP Sbjct: 8 FKGFGVTFSHMFKKVVTTDYPFTPPTPAPRYHGRHIL--NRHPDGLEKCIGCELCAWACP 65 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + D + GER ++ RC C ++CP Sbjct: 66 ADAIYVEGGDNT-----------DEQRFSPGERYASVYQINYA-RCIFCGLCIEACP 110 >gi|322805825|emb|CBZ03390.1| aldo/keto reductase [Clostridium botulinum H04402 065] Length = 378 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 10/136 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + M H + + + EL+ +D +C C C Sbjct: 245 PEITVVLSGMEKMDHIKENIKESNNGYASSLTEKELELIDKVKDIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ + + ++ Sbjct: 357 EACPQNIKIRNMLEEV 372 >gi|283853706|ref|ZP_06370936.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283570916|gb|EFC18946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 378 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 36/142 (25%), Gaps = 35/142 (24%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL---YECVMCACCS 177 V D +V +SHF H + +D+ + +C+ C C Sbjct: 153 VRADSLVVLSHF-KGHELAGFGGAVKNLAMGCAPRAGKQDQHCVRFAVDAKKCIGCGECV 211 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP +R ++ C C C Sbjct: 212 AVCPVGAATM------------------------ADRKAAIDKS----SCIGCGECLTVC 243 Query: 238 PKG---LNPAKAIAKIKMMLLD 256 PK ++ I +++ Sbjct: 244 PKKAMSIDWHTEIVPFMERMVE 265 >gi|238018312|ref|ZP_04598738.1| hypothetical protein VEIDISOL_00136 [Veillonella dispar ATCC 17748] gi|237864783|gb|EEP66073.1| hypothetical protein VEIDISOL_00136 [Veillonella dispar ATCC 17748] Length = 940 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 I ++ P D C+ C C CPS A+L Sbjct: 513 ERILNPDVMITDDPDVYKKNLKAQCVIDDAFTICMECGFCEKHCPSRNLTLTPRQRIALL 572 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + E L + F + C C CP ++ A+ ++ Sbjct: 573 RETKRLENEGNFTLASE-LRKGYEYFGVDTCAACSMCKGLCPLSIDTAQIALSMRR 627 >gi|225873917|ref|YP_002755376.1| FAD-binding/oxidase/4Fe-4S binding domain protein [Acidobacterium capsulatum ATCC 51196] gi|225793612|gb|ACO33702.1| FAD-binding/oxidase/4Fe-4S binding domain protein [Acidobacterium capsulatum ATCC 51196] Length = 979 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 7/79 (8%) Query: 169 ECVMCACCSTS-----CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C + CPSY + ++ + + + Sbjct: 572 RCVGVGACRKADHGTMCPSYMATQEEQHSTRGRAHLLWEMLQGDVLPKSWHNEGV--KEA 629 Query: 224 LYRCHTIMNCTQSCPKGLN 242 L C + C CP ++ Sbjct: 630 LDLCLSCKACKSECPVSVD 648 >gi|218886951|ref|YP_002436272.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757905|gb|ACL08804.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1215 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP + ++ E +G+ L+ L+ Sbjct: 681 PEWLSENCIQCNQCSFVCPHAAIRPILASDEELAGAPASFVA---IEAKGKELNGLKYRM 737 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++Y C +C CP Sbjct: 738 QVYAQDCMGCGSCADVCPAK 757 >gi|170757443|ref|YP_001781143.1| aldo/keto reductase family oxidoreductase [Clostridium botulinum B1 str. Okra] gi|169122655|gb|ACA46491.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum B1 str. Okra] Length = 378 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 10/136 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + M H + + + EL+ +D +C C C Sbjct: 245 PEITVVLSGMEKMDHIKENIKESNNGYASSLTEKELELIDKVKDIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ + + ++ Sbjct: 357 EACPQNIKIRNMLEEV 372 >gi|156314223|ref|XP_001617899.1| hypothetical protein NEMVEDRAFT_v1g225695 [Nematostella vectensis] gi|156196375|gb|EDO25799.1| predicted protein [Nematostella vectensis] Length = 443 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 8/72 (11%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF----RLYRCHTIM 231 C +CP Y L + AY ++ R E R ++ C M Sbjct: 311 CIIACP-YGRLQGVLLDNKTINVAYDFV---RGEKTAGRAKFKKNEDRAATGKGDCIDCM 366 Query: 232 NCTQSCPKGLNP 243 C CP G++ Sbjct: 367 QCVHVCPTGIDI 378 >gi|116329922|ref|YP_799640.1| NADH dehydrogenase (ubiquinone), I chain [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282305|sp|Q04W38|NUOI_LEPBJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|116123611|gb|ABJ74882.1| NADH dehydrogenase (ubiquinone), I chain [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 175 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 14/126 (11%) Query: 118 HMSVIKDLVVDMSHFYSQ---HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 S+ K L + + HF R++ K + H ++ G C C Sbjct: 23 FYSIGKGLWITLKHFIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCF 82 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CC CP+ + A + + D++ + L RC C Sbjct: 83 CCMWICPADAIYIE-----AGEVVPEIQHLHPEDKYAKKF------EIDLLRCIFCGMCE 131 Query: 235 QSCPKG 240 ++CPKG Sbjct: 132 EACPKG 137 >gi|332161708|ref|YP_004298285.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605796|emb|CBY27294.1| pyruvate-flavodoxin oxidoreductase [Yersinia enterocolitica subsp. palearctica Y11] gi|325665938|gb|ADZ42582.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1177 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 16/118 (13%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACP-HSAIRAKVIQPEAMSGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIK---MMLLDRK 258 + + D + L C C + CP KAI +K L++ K Sbjct: 725 EVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MKPRLEHLVEEK 781 >gi|317182515|dbj|BAJ60299.1| NADH dehydrogenase subunit G [Helicobacter pylori F57] Length = 844 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 55/205 (26%) Query: 72 PTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 PT+ C + C C + +DG +C K+ + K L+ + Sbjct: 31 PTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT--------NTKTLMDERK 82 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHED---------------------RQKIDGLYE 169 + P V K + LQ + + Sbjct: 83 SIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNL 142 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR--- 226 C+MC C T+C ++ L+A + + + D+F+ + +D F ++ Sbjct: 143 CIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFKD---NMSKDAFSVWSRKQ 191 Query: 227 -----------CHTIMNCTQSCPKG 240 C+ C CP G Sbjct: 192 KGIISFVGSVPCYDCGECIAVCPVG 216 >gi|295707101|ref|YP_003600176.1| formate dehydrogenase subunit alpha [Bacillus megaterium DSM 319] gi|294804760|gb|ADF41826.1| formate dehydrogenase, alpha subunit [Bacillus megaterium DSM 319] Length = 979 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYP------------LPHMSVIKDLVVDM 129 C +C + ++G +C ++ +K + P L + + + + Sbjct: 47 QTCDTCIVEMNGELVRSCSTKAENGMKIELQSAPAKAAQTEAMDRLLENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWW 185 + H + E P +E C+ C C C + Sbjct: 107 NGNCKLHNTAEMMEIEHQKYPYTPKASENEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R L D C + C CP Sbjct: 167 NETLSIDWEAKRP--RVLWDDGVAINES------------SCVSCGQCVTVCP 205 >gi|268680096|ref|YP_003304527.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Sulfurospirillum deleyianum DSM 6946] gi|268618127|gb|ACZ12492.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Sulfurospirillum deleyianum DSM 6946] Length = 784 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 22/106 (20%) Query: 160 DRQKIDGLYECVMCAC--CSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--RDEFQGERL 215 + ++ C+ C C C +C + LQ + DS R ER+ Sbjct: 292 QAEAMEEASRCLKCQCNECINAC--------------VHLQRFNITPDSYIRSINHNERI 337 Query: 216 DNLEDPFR---LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L + C C CP + + I + +++R Sbjct: 338 -ILGTHHANAMINACTQCGLCKVVCPVDIGMKEIIHMTRESMVERG 382 >gi|322419375|ref|YP_004198598.1| hydrogenase, Fe-only [Geobacter sp. M18] gi|320125762|gb|ADW13322.1| hydrogenase, Fe-only [Geobacter sp. M18] Length = 586 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 49/181 (27%), Gaps = 40/181 (22%) Query: 81 REGICGSCGMNIDGTNTLACVK----DMKDIKGAIAVYPLPHMSVI---------KDLVV 127 + C C + ++G LA K + + + + KD +V Sbjct: 48 QLATCRVCVVEVEGRRNLAPACATPIVDKMVVKTNTIRVMNARKTVMELFLSDHPKDCLV 107 Query: 128 DM-SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACCSTSCPSYW 184 S + SP + +D + + +CVMC C T C Sbjct: 108 CQKSGECELQDLSTKFGLRGSPYDGGAMSTYRKDFSESIIRDMDKCVMCRRCETMCNDVQ 167 Query: 185 W----NSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 + A++ A+ L DS C C CP Sbjct: 168 TCNVLSGVNRGFNAVVAPAFEMNLADS-------------------GCTNCGQCVAVCPV 208 Query: 240 G 240 G Sbjct: 209 G 209 >gi|253582751|ref|ZP_04859971.1| aldo/keto reductase [Fusobacterium varium ATCC 27725] gi|251835327|gb|EES63868.1| aldo/keto reductase [Fusobacterium varium ATCC 27725] Length = 373 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 6/130 (4%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY----ECVMCACCS 177 KD+++ +S + ++ KP Q D C C C Sbjct: 238 QKDVMMVLSGMSEMSQLLDNIGYMKDFKPLTTKEQEIVDNVVKIISESIAIPCTACQYCV 297 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP + + Q+ S + L + C C ++C Sbjct: 298 DGCPKKIAIPNYFSLYNNEKQSAARTGFSIQKAYYANLTQVHGKAS--DCIGCKKCEKAC 355 Query: 238 PKGLNPAKAI 247 P+ + K + Sbjct: 356 PQHIEIVKFL 365 >gi|19548180|gb|AAL90459.1|AF446076_1 [Fe]-hydrogenase [Piromyces sp. E2] Length = 555 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 20/113 (17%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + +CV C C +C + + ++ Sbjct: 95 PCYSPFDDSTFSISRDMNKCVKCGRCVRACHHFQ-----------NINILGFIN----RA 139 Query: 211 QGERLDNLED-PFRLYRCHTIMNCTQSCPKGLNPAKA---IAKIKMMLLDRKI 259 ER+ D P +C C+Q CP G + I ++ + RKI Sbjct: 140 GYERVGTPMDRPMNFTKCVECGQCSQVCPVG-AITERNECIEVLRHLDTKRKI 191 >gi|304383331|ref|ZP_07365797.1| pyruvate:ferredoxin oxidoreductase [Prevotella marshii DSM 16973] gi|304335499|gb|EFM01763.1| pyruvate:ferredoxin oxidoreductase [Prevotella marshii DSM 16973] Length = 1190 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 6/94 (6%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A + E C+ C CS CP + ++ ++ Sbjct: 668 QTGTAAYEKRGVEAFAPEWMADNCIQCNKCSYVCPHACIRP----FVLDEEEYGKFKGET 723 Query: 207 RDEFQGERLDNLED--PFRLYRCHTIMNCTQSCP 238 + ++L + + C NC CP Sbjct: 724 LEMKAPKQLKGMHFRIQVSVMDCVGCGNCADVCP 757 >gi|189191492|ref|XP_001932085.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973691|gb|EDU41190.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 230 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + V + F+ + + H R+ G C+ C C Sbjct: 82 MEMFRGMYVSLEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEA 139 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID +C C +SCP Sbjct: 140 ICPAQAITIEAEERMDGSRRTTRYDIDMT------------------KCIYCGLCQESCP 181 Query: 239 KG 240 Sbjct: 182 VD 183 >gi|220931594|ref|YP_002508502.1| aldo/keto reductase [Halothermothrix orenii H 168] gi|219992904|gb|ACL69507.1| aldo/keto reductase [Halothermothrix orenii H 168] Length = 376 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 7/134 (5%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P +SV+ + + S + K + + + C C C Sbjct: 245 PEVSVVLSGMSTLEQVKENITSADKSGINALSKAELNTINQIKKAYEELSPIMCTGCNYC 304 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP + ++ A+ + E Q + + ++ + C C ++ Sbjct: 305 IP-CPQNVNIPGNF---SLYNNAHIYNDF---ENQKKVYNKWDESAKAGNCVGCGQCEKA 357 Query: 237 CPKGLNPAKAIAKI 250 CP+ L K + K+ Sbjct: 358 CPQNLPIIKLLKKV 371 >gi|297521336|ref|ZP_06939722.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli OP50] Length = 104 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|294501751|ref|YP_003565451.1| formate dehydrogenase subunit alpha [Bacillus megaterium QM B1551] gi|294351688|gb|ADE72017.1| formate dehydrogenase, alpha subunit [Bacillus megaterium QM B1551] Length = 979 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMKD-IKGAIAVYP------------LPHMSVIKDLVVDM 129 C +C + ++G +C ++ +K + P L + + + + Sbjct: 47 QTCDTCIVEMNGELVRSCSTKAENGMKIELQSAPAKAAQTEAMDRLLENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE----CVMCACCSTSCPSYWW 185 + H + E P +E C+ C C C + Sbjct: 107 NGNCKLHNTAEMMEIEHQKYPYTPKASENEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + R L D C + C CP Sbjct: 167 NETLSIDWEAKRP--RVLWDDGVAINES------------SCVSCGQCVTVCP 205 >gi|289522157|ref|ZP_06439011.1| putative NAD-dependent formate dehydrogenase, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503993|gb|EFD25157.1| putative NAD-dependent formate dehydrogenase, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 693 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 64/214 (29%), Gaps = 33/214 (15%) Query: 47 TYYVDLDNCGPMVLDGLLYIKNKID---PTLTLRRSCR-EGICGSCGMNIDGTNTLACVK 102 T +D C + D +L + NK D PTL ++ G C C + ++G + Sbjct: 5 TLIIDGKECKGVQGDTILDVANKNDVYIPTLCFQKGLTPIGACRMCVVQLEGNPKMLPSC 64 Query: 103 DMKDIKGAIAV---YPLPHM--SVIKDLVVDMSHFY-----------SQHRSIEPWLKTV 146 +G + + L V++ L +HF + Sbjct: 65 TTPAQEGMVVITKNEKLKDYRRQVLELLFAGRNHFCMFCSQSGDCELQRLAIEHEMDSVR 124 Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + D + C++C C +C L + + D Sbjct: 125 FPYLYSDFEVDATDADLMMDHNRCILCQRCIRTCS--EIVGAHALDLERRGWQAKVIAD- 181 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G RL + C C QSCP G Sbjct: 182 ----LGNRLAESDT------CVNCGACAQSCPTG 205 >gi|189912908|ref|YP_001964797.1| Polyferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|189913233|ref|YP_001964462.1| Putative iron-sulfur cluster-binding protein; putative transmembrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167777584|gb|ABZ95884.1| Polyferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781301|gb|ABZ99598.1| Putative iron-sulfur cluster-binding protein; putative transmembrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 439 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 11/115 (9%), Positives = 31/115 (26%), Gaps = 11/115 (9%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +F S + + ++ + + + C +CP + + Sbjct: 144 YFISPYEMLADYINLSAFSTTYFYFTLFFTAAMFIDI-GFIREQFCRYACPYARFQTLLM 202 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + + + R + + ++ C C CP G++ Sbjct: 203 DEHSWNVTYDFKRGEPRRDGKT----------KIGDCIACNMCVVVCPTGIDIRD 247 >gi|153938999|ref|YP_001390853.1| aldo/keto reductase family oxidoreductase [Clostridium botulinum F str. Langeland] gi|152934895|gb|ABS40393.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum F str. Langeland] gi|295318921|gb|ADF99298.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum F str. 230613] Length = 378 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 10/136 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + +M H + + + EL+ +D +C C C Sbjct: 245 PEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKDIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ + + ++ Sbjct: 357 EACPQNIKIRNMLEEV 372 >gi|319425371|gb|ADV53445.1| cytochrome c oxidase accessory protein CcoG [Shewanella putrefaciens 200] Length = 491 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +SR + ++ NL D Sbjct: 226 AICTYLNAGWMREQMCLHCCPYSRFQAVMFDANTKTVTYDAQRGESRGPRKRKQATNLAD 285 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 286 LT-LGDCVDCHLCVEVCPTGIDI 307 >gi|110803645|ref|YP_699341.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens SM101] gi|110684146|gb|ABG87516.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens SM101] Length = 1171 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 6/81 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C+ CP +L A A L+ ++ E + Sbjct: 683 PEWIADNCIQCNQCAYVCP--HATIRPFLLTEEEAKNAPASTKLVAAKALKTEEPMQFTM 740 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 L C NC Q CP Sbjct: 741 AVSTL-DCTGCGNCAQVCPAK 760 >gi|110801224|ref|YP_696741.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens ATCC 13124] gi|168205869|ref|ZP_02631874.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens E str. JGS1987] gi|168208763|ref|ZP_02634388.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens B str. ATCC 3626] gi|168212902|ref|ZP_02638527.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens CPE str. F4969] gi|168215688|ref|ZP_02641313.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens NCTC 8239] gi|169343700|ref|ZP_02864699.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens C str. JGS1495] gi|182623964|ref|ZP_02951752.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens D str. JGS1721] gi|110675871|gb|ABG84858.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens ATCC 13124] gi|169298260|gb|EDS80350.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens C str. JGS1495] gi|170662624|gb|EDT15307.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens E str. JGS1987] gi|170713032|gb|EDT25214.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens B str. ATCC 3626] gi|170715463|gb|EDT27645.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens CPE str. F4969] gi|177910857|gb|EDT73211.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens D str. JGS1721] gi|182382191|gb|EDT79670.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens NCTC 8239] Length = 1171 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 6/81 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C+ CP +L A A L+ ++ E + Sbjct: 683 PEWIADNCIQCNQCAYVCP--HATIRPFLLTEEEAKNAPASTKLVAAKALKTEEPMQFTM 740 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 L C NC Q CP Sbjct: 741 AVSTL-DCTGCGNCAQVCPAK 760 >gi|18311043|ref|NP_562977.1| pyruvate-flavodoxin oxidoreductase [Clostridium perfringens str. 13] gi|18145725|dbj|BAB81767.1| pyruvate ferredoxin oxidoreductase [Clostridium perfringens str. 13] Length = 1171 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 6/81 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGP---AILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C C+ CP +L A A L+ ++ E + Sbjct: 683 PEWIADNCIQCNQCAYVCP--HATIRPFLLTEEEAKNAPASTKLVAAKALKTEEPMQFTM 740 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 L C NC Q CP Sbjct: 741 AVSTL-DCTGCGNCAQVCPAK 760 >gi|238796412|ref|ZP_04639921.1| Pyruvate-flavodoxin oxidoreductase [Yersinia mollaretii ATCC 43969] gi|238719857|gb|EEQ11664.1| Pyruvate-flavodoxin oxidoreductase [Yersinia mollaretii ATCC 43969] Length = 1177 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 16/118 (13%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPDAMADA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG---LNPAKAIAKIK---MMLLDRK 258 + D + L C C + CP KAI +K L++ K Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAIN-MKPRLEHLVEEK 781 >gi|57505583|ref|ZP_00371510.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195] gi|57016130|gb|EAL52917.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195] Length = 353 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 34/206 (16%) Query: 26 NLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGIC 85 E RI+R++ + Y + + D LL + D + + E Sbjct: 2 KKLELRIFRFDKELDYESYYKPYIYENYENFLKLYDLLLQV---QDDDIYFKFDKNEN-- 56 Query: 86 GSCGMNIDGTNTLACVKDMK---DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPW 142 + I+ + + PL KDL+ D + F+ + + P+ Sbjct: 57 --SYVKINNIPVPLSTPLEDILLQFGLNLIIEPLSTKRAYKDLLFDKNDFWEKFTLLAPF 114 Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 ED++ L ++G A+ A++ Sbjct: 115 C-------------DEEDKRLYGNLEHFYYA-------DELLEFHSEFMGNALFYLAFKI 154 Query: 203 LIDSRDEFQGER-LDNLEDPF-RLYR 226 + +D + E L L D ++ Sbjct: 155 I--EKDSSKKEAILKILCDKERGIFY 178 >gi|325277774|ref|ZP_08143333.1| iron-sulfur cluster-binding protein [Pseudomonas sp. TJI-51] gi|324097088|gb|EGB95375.1| iron-sulfur cluster-binding protein [Pseudomonas sp. TJI-51] Length = 467 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 22/74 (29%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR--DEFQGERLDNLEDPFRLYRCHTIM 231 A C CP Y L AY D R + R + L C Sbjct: 216 AVCLHMCP-YARFQSVMFDKDTLAVAY----DPRRGEARGPRRKGSDARAQGLGDCIDCT 270 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 271 LCVQVCPTGIDIRD 284 >gi|291544147|emb|CBL17256.1| CO dehydrogenase/acetyl-CoA synthase alpha subunit [Ruminococcus sp. 18P13] Length = 224 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 38/176 (21%) Query: 78 RSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR 137 CR G CG+C + +++K V D+ V F+ + Sbjct: 37 CGCRNGFCGACATIY----RIKGDRELKTCLACQT-------KVENDMYVATLPFFPLVK 85 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + K + L +Y CV C C+ SC + N +Y+ Sbjct: 86 QVYDMEKIKPTEQIMMQL--------YPEIYACVGCNACTKSC-TQSLNVMQYI-----A 131 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 A R D E + C C+ CP G++ + + + Sbjct: 132 YAQRGEFDKCAEES-------------FDCVMCGVCSSRCPAGISHPQVAMLARRL 174 >gi|284929388|ref|YP_003421910.1| NADH-plastoquinone oxidoreductase subunit I protein [cyanobacterium UCYN-A] gi|284809832|gb|ADB95529.1| NADH-plastoquinone oxidoreductase subunit I protein [cyanobacterium UCYN-A] Length = 197 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L V H + +++ + + P HE +C+ C C Sbjct: 19 AKYIGQGLSVTFDHMSRRPITVQYPYEKLIPSERYRGRIHHE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 SCP + + +++ E + + L + F + C NC + C Sbjct: 72 RSCPIN-----------LPVVNWQFNK----ENKKKDLKDYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|261838545|gb|ACX98311.1| d-lactate dehydrogenase [Helicobacter pylori 51] Length = 948 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 499 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 558 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + E Q + L++ L C Sbjct: 559 PS----KDLSLTPRQRIVIHREVERLKERVSHGHHEDQVLLDELLKESEYLAHATCAVCH 614 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 615 MCSVLCPLGIDTGKI 629 >gi|168180165|ref|ZP_02614829.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum NCTC 2916] gi|182669155|gb|EDT81131.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum NCTC 2916] Length = 378 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 10/136 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + +M H + + + EL+ +D +C C C Sbjct: 245 PEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKDIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ + + ++ Sbjct: 357 EACPQNIKIRNMLEEV 372 >gi|33592015|ref|NP_879659.1| NADH dehydrogenase subunit I [Bordetella pertussis Tohama I] gi|33602808|ref|NP_890368.1| NADH dehydrogenase subunit I [Bordetella bronchiseptica RB50] gi|81425357|sp|Q7VZP7|NUOI_BORPE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81429893|sp|Q7WCU7|NUOI_BORBR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|158958056|sp|Q7W5B5|NUOI_BORPA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|33571659|emb|CAE41152.1| NADH-ubiquinone oxidoreductase, chain I [Bordetella pertussis Tohama I] gi|33577250|emb|CAE35807.1| NADH-ubiquinone oxidoreductase, chain I [Bordetella bronchiseptica RB50] gi|332381431|gb|AEE66278.1| NADH dehydrogenase subunit I [Bordetella pertussis CS] Length = 162 Score = 42.8 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + K L + +F+ R + + H R+ +G C+ C C Sbjct: 15 ELFKGLRLTGKYFFK--RKVTLRYPMEKTPTSARFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L +C C +SCP Sbjct: 73 CPALAITIESEQRDDGTRRTTRYDID------------------LTKCIFCGFCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|320325153|gb|EFW81222.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329412|gb|EFW85405.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 470 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCT 234 C CP Y L+ +Y R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISYNPN---RGETRGPRKKEADHRAQGLGDCIDCTMCV 277 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 278 QVCPTGIDIRD 288 >gi|319789467|ref|YP_004151100.1| cytochrome-c3 hydrogenase alpha chain [Thermovibrio ammonificans HB-1] gi|317113969|gb|ADU96459.1| cytochrome-c3 hydrogenase alpha chain [Thermovibrio ammonificans HB-1] Length = 355 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 48/153 (31%), Gaps = 23/153 (15%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 +DL + + +P + + + ++ + C+ C C+ CP Sbjct: 191 KEDLNAYKATTLKKKSLFKPEQLPDLERISHVVELEYDSEVWQEEAKRCLGCGTCTNVCP 250 Query: 182 SYWWNSDRYLGPAILLQAYR-------------------WLIDSRDEFQGERL--DNLED 220 + + + + + R + +R + R + Sbjct: 251 TCFCYTSVDVPNIAGTEVKRIEFTTSCQYPYYSLVAGGHYFKATRADRFKHRYYHKLVGY 310 Query: 221 PFRLY--RCHTIMNCTQSCPKGLNPAKAIAKIK 251 P+++ C C+ CP ++ + I +++ Sbjct: 311 PYQVEMLGCVGCGRCSAECPASISMVETIKRLR 343 >gi|289425635|ref|ZP_06427407.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes SK187] gi|289153936|gb|EFD02629.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes SK187] Length = 199 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + + K + H+ + DGL +CV C C+ Sbjct: 2 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW 61 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQ 235 +CP+ + D+ DE + GER + + L RC C + Sbjct: 62 ACPADAIYVEG--------------ADNTDEERYSPGERYGRVYEINYL-RCILCGMCIE 106 Query: 236 SCP 238 +CP Sbjct: 107 ACP 109 >gi|218678227|ref|ZP_03526124.1| electron transfer ferredoxin B protein [Rhizobium etli CIAT 894] Length = 97 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 3/88 (3%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 + C+ C C +C S +G A + + + + R+ Sbjct: 4 NWVPEYLTCIDATTCIGCGRCFKAC-SREVMHLYGVGEAGEILGICDDEEEDFDGELNRM 62 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + D RC C + CPK Sbjct: 63 IMVVDEAG--RCIGCGACARVCPKNCQI 88 >gi|206900502|ref|YP_002250813.1| nitrogen fixation iron-sulphur protein rnfc [Dictyoglomus thermophilum H-6-12] gi|206739605|gb|ACI18663.1| nitrogen fixation iron-sulphur protein rnfc [Dictyoglomus thermophilum H-6-12] Length = 437 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 18/102 (17%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 E++ + CV C C CP + R++ + E Sbjct: 352 FPEEKVEYYEPIPCVRCGKCLDVCPMGLMPTT----------LARYVKKGKLIEAEEL-- 399 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + C +C CP + I K +L ++ Sbjct: 400 ------GILDCIECGSCNYICPSRRPLLQWIRVGKADVLAKR 435 >gi|166366555|ref|YP_001658828.1| pyruvate-flavodoxin oxidoreductase [Microcystis aeruginosa NIES-843] gi|166088928|dbj|BAG03636.1| pyruvate-flavodoxin oxidoreductase [Microcystis aeruginosa NIES-843] Length = 1184 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LID 205 ++ ++ + CV C C CP S Y + + + + Sbjct: 669 PTATSQWEKRNIAQEIPVWDADVCVQCGKCVLVCPHAVIRSKVYDEAELATAPETFKVAN 728 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++D ++ C C CP Sbjct: 729 AKDHDWKGLKFTIQVAAE--DCTGCGLCVDVCPAK 761 >gi|197120279|ref|YP_002140706.1| NADH dehydrogenase I subunit I [Geobacter bemidjiensis Bem] gi|253702587|ref|YP_003023776.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M21] gi|197089639|gb|ACH40910.1| NADH dehydrogenase I, I subunit [Geobacter bemidjiensis Bem] gi|251777437|gb|ACT20018.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M21] Length = 132 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 21/122 (17%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M +IK L + +SH + + +++ + L + +CV C C T Sbjct: 3 MPLIKGLQITLSHMFKKPVTLQYPTERPQIANTFRGLHAL---NVSHDKAKCVACYLCPT 59 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + A ++ ID RC C ++CP Sbjct: 60 VCPAKCITVEAGEDQNHDKYAAKYEIDML------------------RCIFCGYCVEACP 101 Query: 239 KG 240 Sbjct: 102 VD 103 >gi|332981476|ref|YP_004462917.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein [Mahella australiensis 50-1 BON] gi|332699154|gb|AEE96095.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Mahella australiensis 50-1 BON] Length = 284 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 30/117 (25%), Gaps = 5/117 (4%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 +F + + + ++ + +C+ C C +C + N Sbjct: 130 PVYDYFIGDAMEESEYKLSPTMAKIDAMMPDERWAYFTSQMKKCIRCYSCRQACYLCYCN 189 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + RW+ + D RC C + CP L Sbjct: 190 KC-----FVDRNQPRWMARTTDLSDNIYYHLGRIMHTAGRCVQCGACERVCPMDLKI 241 >gi|309388568|gb|ADO76448.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Halanaerobium praevalens DSM 2228] Length = 445 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + K C+ C+ C+ CP Y + L P +++A + D E L + Sbjct: 246 EHIKNKAKAACIQCSLCTEYCPRYLIGHE--LEPHRIMRALSYNED------AEVLKEAQ 297 Query: 220 DPFRLYRCHTIMNCT-QSCPKGLNP 243 C C +CP GL+P Sbjct: 298 I------CCECGICELYACPMGLSP 316 >gi|110680292|ref|YP_683299.1| dihydropyrimidine dehydrogenase [Roseobacter denitrificans OCh 114] gi|109456408|gb|ABG32613.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter denitrificans OCh 114] Length = 434 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 27/126 (21%) Query: 118 HMSVIKDLVVDMSHFYSQ--HRSIEPWLKTVSPKP-AKELLQSHEDRQKIDGLYECVMCA 174 V+++++ +S + + H +I ++ P + L + + +C+ C Sbjct: 292 GFKVVQEMISGLSQWMDEKGHTNIRDFMGAAIPNTTDWQYLNLNYVAKAQINQADCISCG 351 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C +C QA +R+ ++ D C C Sbjct: 352 RCYAACED------------TSHQAIAM--------SEDRVFSVIDEE----CVACNLCV 387 Query: 235 QSCPKG 240 + CP Sbjct: 388 EVCPVE 393 >gi|15894054|ref|NP_347403.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|15023652|gb|AAK78743.1|AE007592_4 Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|325508181|gb|ADZ19817.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 376 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 41/120 (34%), Gaps = 5/120 (4%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + DMS + + + + ++++ + C C C CP Sbjct: 248 MSDMSQLLDNTSYMMEFKPLNNEE--YQVIEEAVEIIHKSITVPCTACQYCVEGCPKNIP 305 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + ++ + ++L + + + + ++ + C C +SCP+ + K Sbjct: 306 IPKYF---SLYNKEKQYLNTGSSKQKSDYKEYIKIYGKASDCIGCKQCEKSCPQHIEITK 362 >gi|94314551|ref|YP_587760.1| D-lactate dehydrogenase [Cupriavidus metallidurans CH34] gi|93358403|gb|ABF12491.1| D-lactate dehydrogenase (Cytochrome), FAD-binding domain protein [Cupriavidus metallidurans CH34] Length = 1007 Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R + + +G + D Sbjct: 599 EMCNNNGHCRKFDAGTMCPSYRVTRDEQHLTRGRANTLRLALSGQLGTEGLLDVAVRDTM 658 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 L C + C + CP G++ AK +++ Sbjct: 659 DL--CVSCKGCKRDCPTGIDMAKMKIEVR 685 >gi|313201818|ref|YP_004040476.1| cytochrome c oxidase accessory protein ccog [Methylovorus sp. MP688] gi|312441134|gb|ADQ85240.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. MP688] Length = 489 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 24/88 (27%), Gaps = 14/88 (15%) Query: 165 DGLYECVMCACCSTSCPSYWWNSD---------RYLGPAILLQAYRWLIDSRDEFQGERL 215 + C+ +CP + Y A R L + + + ER Sbjct: 218 YVAAGLLRENICTLACPYARFQGVMYEPDTLAVSYDAKRGEGLAGRTLPIAGLKTREER- 276 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 277 ----QAKGHGDCIDCGFCVQVCPTGIDI 300 >gi|304390114|ref|ZP_07372068.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326596|gb|EFL93840.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 245 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + + + V +P + DGL +CV C C+ +CP+ Sbjct: 57 FGVTFRNFFRPYVTEQYPFEKVPTQPRYHGRHQL--NRYPDGLEKCVGCELCAWACPA-- 112 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A ++ GER + + L RC C ++CP Sbjct: 113 --DAIYVEAAANTPEAQY-------SAGERYGRVYEINYL-RCIFCGMCIEACP 156 >gi|295319930|gb|ADG00308.1| cysteine-rich domain protein [Clostridium botulinum F str. 230613] Length = 346 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 28 YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 60 >gi|257469412|ref|ZP_05633504.1| anaerobic sulfite reductase subunit A [Fusobacterium ulcerans ATCC 49185] gi|317063658|ref|ZP_07928143.1| anaerobic sulfite reductase subunit A [Fusobacterium ulcerans ATCC 49185] gi|313689334|gb|EFS26169.1| anaerobic sulfite reductase subunit A [Fusobacterium ulcerans ATCC 49185] Length = 345 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 40/118 (33%), Gaps = 25/118 (21%) Query: 162 QKIDGLYECVMCACCSTSCPS--------YWWNSDRYLGPAILLQA-------------Y 200 + C+ C C+ +C + ++SD G + A + Sbjct: 220 MWKEYDKRCLECGSCTVACSTCTCFTTYDINYSSDTDAGERRRMHASCHIDGFTSIAGGH 279 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLY----RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D+ + + L + D L+ C C + CP G++ A+ ++ + Sbjct: 280 SFRNTPGDKMRFKVLHKIHDHKALFKEYQMCVGCGRCDERCPVGISFIHAVNRLAQEV 337 >gi|298346126|ref|YP_003718813.1| NADH dehydrogenase subunit I [Mobiluncus curtisii ATCC 43063] gi|298236187|gb|ADI67319.1| NADH dehydrogenase subunit I [Mobiluncus curtisii ATCC 43063] Length = 245 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + + + V +P + DGL +CV C C+ +CP+ Sbjct: 57 FGVTFRNFFRPYVTEQYPFEKVPTQPRYHGRHQL--NRYPDGLEKCVGCELCAWACPA-- 112 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A ++ GER + + L RC C ++CP Sbjct: 113 --DAIYVEAAANTPEAQY-------SAGERYGRVYEINYL-RCIFCGMCIEACP 156 >gi|116329474|ref|YP_799194.1| NADH dehydrogenase (ubiquinone), I chain [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122282746|sp|Q04XD4|NUOI_LEPBL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|116122218|gb|ABJ80261.1| NADH dehydrogenase (ubiquinone), I chain [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 175 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 14/126 (11%) Query: 118 HMSVIKDLVVDMSHFYSQ---HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 S+ K L + + HF R++ K + H ++ G C C Sbjct: 23 FYSIGKGLWITLKHFIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCF 82 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CC CP+ + A + + D++ + L RC C Sbjct: 83 CCMWICPADAIYIE-----AGEVVPEIQHLHPEDKYAKKF------EIDLLRCIFCGMCE 131 Query: 235 QSCPKG 240 ++CPKG Sbjct: 132 EACPKG 137 >gi|302037261|ref|YP_003797583.1| formate dehydrogenase subunit alpha [Candidatus Nitrospira defluvii] gi|300605325|emb|CBK41658.1| Formate dehydrogenase, alpha subunit [Candidatus Nitrospira defluvii] Length = 908 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 47/172 (27%), Gaps = 23/172 (13%) Query: 83 GICGSCGMNIDGTNTL-ACVKDMKDIKGAIAVYPLPHMSVIK---DLVVDMSHFYSQH-- 136 G C C ++G + L A + + + +L + + Sbjct: 42 GSCRLCLCEVEGQSGLPASCTTPVREGMVVHTESERLNRLRRNIVELYLSEQPAGDRAPE 101 Query: 137 ------RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 +S+ ++ + + C+ CA C +C D Sbjct: 102 SLQWLAKSLGLRQVRYPQPSHRQDVVDRSNPFFTFDNAACISCARCVRAC-------DEI 154 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--YRCHTIMNCTQSCPKG 240 G L +R SR L E+ C + C + CP G Sbjct: 155 QGTHALTMLHRGFA-SRPVAGAASLTG-EEAAGFASSNCVSCGACVKECPTG 204 >gi|297380401|gb|ADI35288.1| D-lactate dehydrogenase [Helicobacter pylori v225d] Length = 946 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEYLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSQGHHEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEYLDMCMECGFCERVCPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|320009272|gb|ADW04122.1| FAD linked oxidase domain protein [Streptomyces flavogriseus ATCC 33331] Length = 942 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 11/84 (13%) Query: 168 YECVMCACCSTS---------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 CV A C T+ CPS+ + + ++ G R + Sbjct: 523 RRCVGVATCRTATPGPGADVMCPSFRATGEEAHSTRGRARLLHEMLAGEVITDGWRSTEV 582 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 583 RDA--LDLCLSCKGCRSDCPVGVD 604 >gi|254779766|ref|YP_003057872.1| putative D-lactate dehydrogenase [Helicobacter pylori B38] gi|254001678|emb|CAX29897.1| Putative D-lactate dehydrogenase [Helicobacter pylori B38] Length = 946 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 23/137 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGLLNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERIC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLI-------DSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + +E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREIERLKERVSQGHNEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKAIA 248 C+ CP G++ +IA Sbjct: 613 MCSTLCPLGID-TGSIA 628 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERICPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|20089546|ref|NP_615621.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit 1 [Methanosarcina acetivorans C2A] gi|19914459|gb|AAM04101.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit 1 [Methanosarcina acetivorans C2A] Length = 447 Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 28/110 (25%), Gaps = 34/110 (30%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 E D C+ CA C CP R+ Sbjct: 356 QTEAEVLRDEATVCIHCARCVDVCPMNLLPG--------------------------RIA 389 Query: 217 NLEDPFRLYRCHT--------IMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D RC C CP + + I K+ ++++K Sbjct: 390 AMADMGMFDRCREYFALNCIECGECAVVCPAKRHLVQLIRYSKLQIMNQK 439 >gi|317180992|dbj|BAJ58778.1| NADH dehydrogenase subunit G [Helicobacter pylori F32] Length = 844 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|307327733|ref|ZP_07606917.1| FAD linked oxidase domain protein [Streptomyces violaceusniger Tu 4113] gi|306886631|gb|EFN17633.1| FAD linked oxidase domain protein [Streptomyces violaceusniger Tu 4113] Length = 985 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 31/117 (26%), Gaps = 10/117 (8%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWW 185 + + E H+ + CV A C CPSY Sbjct: 502 QRLDQNLRFDPLPRRPVDVEFGYPHDKGDFSAAVRRCVGVAKCRNESVSGDGVMCPSYRV 561 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + ++ G R + + D L C + C CP ++ Sbjct: 562 TGEEKHSTRGRARLLHEMLAGEVVQDGWRSEEVRDA--LDLCLSCKGCRSDCPVEVD 616 >gi|297568679|ref|YP_003690023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924594|gb|ADH85404.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 559 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 34/103 (33%), Gaps = 7/103 (6%) Query: 142 WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR 201 W + + P A L + + + C C C +CP PA L A R Sbjct: 223 WCRYLCPLGALLGLLARWSLLRREVAEGCTNCGACGRNCPGGAEPRSLQHLPAGLHDAGR 282 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYR---CHTIMNCTQSCPKGL 241 + E + + P +R CH NC CP L Sbjct: 283 Q----QTETVADSKEQARQPAAGWRRSECHACFNCDDLCPHNL 321 >gi|158958055|sp|Q6MDQ8|NUOI_PARUW RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I Length = 157 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 14/121 (11%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++K L++ + H + + H + DGL CV C C+ Sbjct: 10 TMMKGLIIVLKHAFQ--TPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIV 67 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ Y+ PA GER + L RC C ++CP Sbjct: 68 CPAQAI----YVKPAANEP-------GHIHSHGERYASDFQINML-RCIFCGYCEEACPT 115 Query: 240 G 240 G Sbjct: 116 G 116 >gi|149174243|ref|ZP_01852870.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Planctomyces maris DSM 8797] gi|148846788|gb|EDL61124.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Planctomyces maris DSM 8797] Length = 374 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 22/129 (17%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR---- 201 + L+ + E Q + C+ C C+ CP+ + +S + R Sbjct: 243 DTTDIKDLLMSNLEHSQWDEVAERCLSCTNCTMVCPTCFCSSVEEVSDLTGDHVERQREW 302 Query: 202 ---WLID------------SRDEFQG---ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + +D R+ ++ +L D F C C CP G++ Sbjct: 303 DSCFNLDFSYMNGGLVRNSIRNRYRQWLTHKLATWIDQFGTSGCVGCGRCITWCPVGIDL 362 Query: 244 AKAIAKIKM 252 + + I+ Sbjct: 363 TQEVDAIRE 371 >gi|19547863|gb|AAK60409.1| hydrogenase [Neocallimastix frontalis] Length = 636 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 31/116 (26%), Gaps = 16/116 (13%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +D H + S + + +CV C C +C + Sbjct: 145 QIDAKHPVRSLLKHKSKKTNHSITEPCYSPFDNTTFSVARDMNKCVKCGRCIRACHHFQ- 203 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-PFRLYRCHTIMNCTQSCPKG 240 + ++ ER+ D P +C C+Q CP G Sbjct: 204 ----------NINILGFIN----RAGYERVGTPMDRPMNFTKCVECGQCSQVCPVG 245 >gi|46578680|ref|YP_009488.1| ferredoxin, 4Fe-4S [Desulfovibrio vulgaris str. Hildenborough] gi|120603752|ref|YP_968152.1| hypothetical protein Dvul_2714 [Desulfovibrio vulgaris DP4] gi|46448092|gb|AAS94747.1| ferredoxin, 4Fe-4S, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563981|gb|ABM29725.1| protein of unknown function DUF224, cysteine-rich region domain protein [Desulfovibrio vulgaris DP4] gi|311232553|gb|ADP85407.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio vulgaris RCH1] Length = 439 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 5/120 (4%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 R I K K + + + C+ C C+ +C + + Sbjct: 14 MRGIAALTPERIEKVVKAVTEGEAGARLKVYYETCMRCGLCAKACHYCISHDGEPDYSPV 73 Query: 196 LLQ---AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 +R L + D + + C+ C CP G++ I+ ++ Sbjct: 74 GKMEQTMWRLLREGGRVSPDVIYDMAQIAYT--ECNLCRRCIHYCPIGIDTGYVISLVRR 131 >gi|88809899|ref|ZP_01125405.1| NADH dehydrogenase subunit I [Synechococcus sp. WH 7805] gi|88786283|gb|EAR17444.1| NADH dehydrogenase subunit I [Synechococcus sp. WH 7805] Length = 218 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 ++ + L V H + +++ + + P +E +C+ C C Sbjct: 19 ARNLTQGLAVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|299136503|ref|ZP_07029686.1| NADH-quinone oxidoreductase, chain I [Acidobacterium sp. MP5ACTX8] gi|298601018|gb|EFI57173.1| NADH-quinone oxidoreductase, chain I [Acidobacterium sp. MP5ACTX8] Length = 165 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + + H+ ++ +GL +CV C C+ +CP+ Y+ A + R Sbjct: 36 PLRGAQLQERFRGKHQLQRDENGLEKCVACFLCAAACPANCI----YIEAAENTEEVRI- 90 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ER + + RC C ++CP AI Sbjct: 91 ------SSAERYAKVYNIDY-NRCIFCGYCVEACP-----TDAITH 124 >gi|259484821|tpe|CBF81370.1| TPA: hypothetical protein similar to : Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Broad) [Aspergillus nidulans FGSC A4] Length = 224 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + V + F+ + + H R+ G C+ C C Sbjct: 77 EIFRGMYVVLEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEAV 134 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 135 CPAQAITIEAEERVDGSRRTTRYDIDMT------------------KCIYCGYCQESCPV 176 Query: 240 G 240 Sbjct: 177 D 177 >gi|261416519|ref|YP_003250202.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372975|gb|ACX75720.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 188 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 20/99 (20%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY--LGPAILLQAYR 201 P+ H + DG CV C C+ +CP++ + P I + R Sbjct: 47 PEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEKRVMR 106 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ID C C ++CP Sbjct: 107 FDIDHL------------------TCVFCGLCAEACPVD 127 >gi|229159670|ref|ZP_04287681.1| formate dehydrogenase [Bacillus cereus R309803] gi|228623821|gb|EEK80636.1| formate dehydrogenase [Bacillus cereus R309803] Length = 988 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 12 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 71 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 72 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 131 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 132 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRP--RV 189 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 190 IWDNGVS--------INDS----SCVSCGQCVTVCP 213 >gi|171058193|ref|YP_001790542.1| NADH dehydrogenase subunit I [Leptothrix cholodnii SP-6] gi|170775638|gb|ACB33777.1| NADH-quinone oxidoreductase, chain I [Leptothrix cholodnii SP-6] Length = 165 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 20/110 (18%) Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 HF+ + +++ + H R+ +G C+ C C CP+ + Sbjct: 29 HFFQRTVTVQ--FPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPAMAITIESD 86 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + R+ ID L +C C +SCP Sbjct: 87 VRADGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 118 >gi|148643668|ref|YP_001274181.1| aldo/keto reductase family oxidoreductase [Methanobrevibacter smithii ATCC 35061] gi|148552685|gb|ABQ87813.1| predicted oxidoreductase, aldo/keto reductase family [Methanobrevibacter smithii ATCC 35061] Length = 404 Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 13/162 (8%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + P ++ + + +++ E + Sbjct: 224 ADPSKTNAEWSISWILNHPEITCVFSGMNNIAQIDENIAIGNSVEPHSMSLEELETIDYA 283 Query: 159 EDRQKIDGLYECVMCACCSTSCPS-------YWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + K C C C CP +++YL L S ++ Sbjct: 284 KRALKELLQINCTSCGYCLP-CPRGVNIPECMKIYNEKYLF-----NQKGLLNQSLIDYY 337 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + D C+ C + CP+ L+ K + K+K Sbjct: 338 LTVSGIMIDSSNAGLCNGCRKCLRKCPQHLDIPKELDKVKKE 379 >gi|302388680|ref|YP_003824501.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermosediminibacter oceani DSM 16646] gi|302199308|gb|ADL06878.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermosediminibacter oceani DSM 16646] Length = 849 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 29/140 (20%) Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC--CSTSCPSYW 184 V F + ++++ + + L E+ C+ C C C C Sbjct: 443 VSAEQFLPRVQTMKLSPEERIKGFMEVDLGFTEEMA-RKEAERCLQCECRLCVKEC---- 497 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-----YRCHTIMNCTQSCPK 239 ++ E + D ++ Y C+ CT CPK Sbjct: 498 -----------------LMLQDFTHCPKELFKEILDTGKVNPLVPYSCNMCNKCTLECPK 540 Query: 240 GLNPAKAIAKIKMMLLDRKI 259 A ++I+ L+ + I Sbjct: 541 EFRLADRFSEIRKELVKQGI 560 >gi|261880705|ref|ZP_06007132.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Prevotella bergensis DSM 17361] gi|270332477|gb|EFA43263.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Prevotella bergensis DSM 17361] Length = 1201 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 6/88 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E C+ C C+ SCP ++ +A ++S + Sbjct: 675 YEKRGVEAFVPQWNPENCIQCNKCAYSCP--HATIRPFVMDDEENKAVS--LESLEMKAP 730 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 + + + + C NC CP Sbjct: 731 KEMKGMHFRIQVSVMDCLGCGNCADVCP 758 >gi|54310626|ref|YP_131646.1| putative FixG-related protein [Photobacterium profundum SS9] gi|46915069|emb|CAG21844.1| Putative FixG-related protein [Photobacterium profundum SS9] Length = 476 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 24/90 (26%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP Y + Y + R E +G R + Sbjct: 211 AVCTYANAGWMRSIVCIHMCP-YARFQSAMFDKDTYIVGY---NEERGEARGPRSRKKDP 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 267 KELGLGDCIDCDLCVQVCPTGIDIRDGLQY 296 >gi|317178440|dbj|BAJ56228.1| NADH dehydrogenase subunit G [Helicobacter pylori F30] Length = 844 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|261838589|gb|ACX98355.1| NADH-ubiquinone oxidoreductase chain G [Helicobacter pylori 51] Length = 844 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|325983281|ref|YP_004295683.1| NADH-quinone oxidoreductase, chain I [Nitrosomonas sp. AL212] gi|325532800|gb|ADZ27521.1| NADH-quinone oxidoreductase, chain I [Nitrosomonas sp. AL212] Length = 162 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 35/122 (28%), Gaps = 20/122 (16%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 ++K + V + + I + H R+ +G C+ C C Sbjct: 14 FELLKGMAVTGKYLFKP--KITVHYPEEKTPQSPRFRGLHALRRYPNGEERCIACKLCEA 71 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + + R+ ID L +C C +SCP Sbjct: 72 VCPAMAITIESEQRADGTRRTTRYDID------------------LSKCIFCGFCEESCP 113 Query: 239 KG 240 Sbjct: 114 VD 115 >gi|229828888|ref|ZP_04454957.1| hypothetical protein GCWU000342_00973 [Shuttleworthia satelles DSM 14600] gi|229792051|gb|EEP28165.1| hypothetical protein GCWU000342_00973 [Shuttleworthia satelles DSM 14600] Length = 1176 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 20/79 (25%), Gaps = 14/79 (17%) Query: 165 DGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 C+ C CS CP + D A +D + + Sbjct: 688 WNSDNCIGCGFCSYVCPHAAIRTIALTDDEVANAPEGFAA-------KDLRPTDYKYAVV 740 Query: 220 DPFRLYRCHTIMNCTQSCP 238 Y C +C CP Sbjct: 741 --VSAYDCTGCGSCANVCP 757 >gi|226306206|ref|YP_002766166.1| NADH-quinone oxidoreductase chain I [Rhodococcus erythropolis PR4] gi|259514779|sp|C0ZYJ2|NUOI_RHOE4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226185323|dbj|BAH33427.1| NADH-quinone oxidoreductase chain I [Rhodococcus erythropolis PR4] Length = 195 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +S + + + + A H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTLSTMFKKPET--EFYPEEKRPTAPGYHGRHQLNRYADGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A + R+ GER + L RC C ++CP Sbjct: 67 --DAIYVEGADNTEEERFSP-------GERYGQVYQINYL-RCIGCGLCVEACP 110 >gi|170722740|ref|YP_001750428.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida W619] gi|169760743|gb|ACA74059.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida W619] Length = 472 Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R + + L C C Sbjct: 223 CVYMCPYARFQSVMFDKDTLIVSY-----DPRRGETRGPRKKDADYKAQGLGDCIDCTMC 277 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 278 VQVCPTGIDIRD 289 >gi|328953383|ref|YP_004370717.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacca acetoxidans DSM 11109] gi|328453707|gb|AEB09536.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacca acetoxidans DSM 11109] Length = 379 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 28/112 (25%), Gaps = 22/112 (19%) Query: 162 QKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLI-----------DSR 207 + C+ C C+ CP+ + L + W S Sbjct: 262 HWDEVAARCLSCGNCTLVCPTCFCHRIEDKSDLDGRAAERWRHWDACHTLQFAYIHGGSL 321 Query: 208 DEFQGER--------LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R L D F C C CP G++ + I+ Sbjct: 322 RNSPKSRYRQWLTHKLAAWFDQFGSLGCVGCGRCLVWCPVGIDLTAEVQAIR 373 >gi|288573731|ref|ZP_06392088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569472|gb|EFC91029.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 365 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN-----LEDPFRLYRCHTIM 231 +CP +D+ + + L+ + D +E G+ + + + + +RC Sbjct: 5 EAACPELRVFADKCVDCGMCLKGC-IMSDQLEEGPGKVVSHFLKNGVIEDDWPFRCSLCG 63 Query: 232 NCTQSCPKGLNPAKAIAKIKMML 254 C+ CP G + + ++ Sbjct: 64 YCSSVCPVGADLRSVMTALRKKA 86 >gi|197336953|ref|YP_002157842.1| putative formate dehydrogenase [Vibrio fischeri MJ11] gi|197314205|gb|ACH63654.1| putative formate dehydrogenase [Vibrio fischeri MJ11] Length = 1387 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 7/76 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +C + G ++ SR E + + Sbjct: 615 FDANRCISCGQCVEACNEKGVH-----GVLSFMKNEDGTNASRPECRAGFEHGYQ--MGN 667 Query: 225 YRCHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 668 SNCVQCGACVQACPVG 683 >gi|190894287|ref|YP_001984581.1| ferredoxin oxidase protein [Rhizobium etli CIAT 652] gi|190699948|gb|ACE94031.1| ferredoxin oxidase protein [Rhizobium etli CIAT 652] gi|327191657|gb|EGE58665.1| ferredoxin oxidase protein [Rhizobium etli CNPAF512] Length = 524 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 9/72 (12%) Query: 176 CSTSCPSYWWNSDRYL--GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C+ CP + +R SR + + L + C C Sbjct: 233 CTYMCPWPRIQGAMLDENSLVVTYNDWRGEQRSRHGKKAQGLP-------VGDCVDCNAC 285 Query: 234 TQSCPKGLNPAK 245 CP G++ Sbjct: 286 VAVCPMGIDIRD 297 >gi|172087798|ref|YP_206209.2| formate dehydrogenase-H [Vibrio fischeri ES114] gi|171902382|gb|AAW87321.2| formate dehydrogenase-H [Vibrio fischeri ES114] Length = 1387 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 7/76 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +C + G ++ SR E + + Sbjct: 615 FDANRCISCGQCVEACNEKGVH-----GVLSFMKNEDGTNASRPECRAGFEHGYQ--MGN 667 Query: 225 YRCHTIMNCTQSCPKG 240 C C Q+CP G Sbjct: 668 SNCVQCGACVQACPVG 683 >gi|218782882|ref|YP_002434200.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764266|gb|ACL06732.1| Putative dissimilatory sulfite reductase, alpha subunit [Desulfatibacillum alkenivorans AK-01] Length = 351 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 22/117 (18%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYW----------WNSDRYLGPAILLQA----YRWL 203 ++ D + C+ C C+ CP+ W + R + A + Sbjct: 227 YDAEFWEDVAFACINCGTCTYLCPTCWCFDIQDEVQGTDGCRMRNWDTCMSALFTKHGTG 286 Query: 204 IDSRDEFQGERLDNLEDPFRLY--------RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 + R + Y C C Q CP ++ + + Sbjct: 287 HNPRPNKTARVRQRFMHKLKYYVDKYENGIACVGCGRCVQQCPVNIDIRRVCDLMNR 343 >gi|21492676|ref|NP_659750.1| ferredoxin oxidase protein [Rhizobium etli CFN 42] gi|21467101|gb|AAM54764.1| ferredoxin oxidase protein [Rhizobium etli CFN 42] Length = 524 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 9/72 (12%) Query: 176 CSTSCPSYWWNSDRYL--GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C+ CP + +R SR + + L + C C Sbjct: 233 CTYMCPWPRIQGAMLDENSLVVTYNDWRGEQRSRHGKKAQGLP-------VGDCVDCNAC 285 Query: 234 TQSCPKGLNPAK 245 CP G++ Sbjct: 286 VAVCPMGIDIRD 297 >gi|78044647|ref|YP_359587.1| NAD-dependent formate dehydrogenase subunit alpha, selenocysteine-containing [Carboxydothermus hydrogenoformans Z-2901] gi|77996762|gb|ABB15661.1| NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing [Carboxydothermus hydrogenoformans Z-2901] Length = 893 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 33/209 (15%) Query: 50 VDLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDG-TNTLACVKDMKDI 107 +++ + I PTL + G C C + + G N +A Sbjct: 11 IEVTVPEGTTILEAAQIAGFKIPTLCYDPELSKPGACRICVVEVKGARNLVASCVTPVAP 70 Query: 108 KGAIAVYPLPHMSVIKD-------------LVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 + + P ++ ++ L D + + ++ Sbjct: 71 GMEVLTHSEPVINARREILDLLLSNHPEDCLTCDKMGECALADYAYEYGVRRGSYQGEKN 130 Query: 155 LQSHEDRQKI--DGLYECVMCACCSTSCP-SYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + ED + +C++C C C ++ ++ + + D Sbjct: 131 VYPIEDNNPFIVRDMNKCILCGKCVRVCDEIVGYSVIDFINRGFKTK----VAPPYDGTL 186 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 E C +C CP G Sbjct: 187 AES-----------NCVFCGSCVTVCPTG 204 >gi|83590018|ref|YP_430027.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572932|gb|ABC19484.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 340 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 30/107 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS------------------------DRYLGPAILLQ 198 + C+ C C+ SCP+ S D + A + Sbjct: 219 WREYSSRCIACGRCTLSCPTCSCFSVQDIFYRDNPERGERRRVWASCQIDGFTDMAGGHK 278 Query: 199 AYRWLIDSRDEFQGERLDNLED---PFRLYRCHTIMNCTQSCPKGLN 242 D + + + L ++D F + C C + CP+ ++ Sbjct: 279 VRE---DRGERMRFKVLHKIDDFRRRFGINMCVGCGRCEEVCPEYIS 322 >gi|148266248|ref|YP_001232954.1| molybdopterin oxidoreductase [Geobacter uraniireducens Rf4] gi|146399748|gb|ABQ28381.1| molybdopterin oxidoreductase [Geobacter uraniireducens Rf4] Length = 828 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 17/101 (16%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 +E+ + C+ C C+ C A Sbjct: 117 YKVNTNKFHDEKFHHKIDYENPLIERDMNRCIHCGKCARICDEIVSYG-----------A 165 Query: 200 YRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 Y ++ + + C +C CP G Sbjct: 166 YTFISRGIEA------KMGTEFDGPLNCEFCGSCVSVCPVG 200 >gi|150016647|ref|YP_001308901.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] gi|149903112|gb|ABR33945.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] Length = 644 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 40/133 (30%), Gaps = 36/133 (27%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSI--EPWLKTVSPKPAKELLQSHEDRQKIDGLYE- 169 +Y L +++V + M+ ++ I + + + K+ S + + + Sbjct: 164 IYLLRNLAVT--VKSKMNQKHNIMEEIIDKFYEEIEEHIEEKKCYTSQCNHLVKLTITKK 221 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY--RC 227 C+ C C +CP N + L+ + RC Sbjct: 222 CIGCGACKRACPVDCINGE-----------------------------LKKKHEIDYNRC 252 Query: 228 HTIMNCTQSCPKG 240 C +CP Sbjct: 253 THCGACVSACPVD 265 >gi|288940524|ref|YP_003442764.1| cytochrome c oxidase accessory protein CcoG [Allochromatium vinosum DSM 180] gi|288895896|gb|ADC61732.1| cytochrome c oxidase accessory protein CcoG [Allochromatium vinosum DSM 180] Length = 479 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 4/79 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP Y L + ++ Y + R E +G E Sbjct: 212 YVLAGFLREQTCFWLCP-YARIQGVMLDRSTIVPTY---DERRGEPRGRVKREDEGERTT 267 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 268 GDCVDCNQCVAVCPTGVDI 286 >gi|254571471|ref|XP_002492845.1| hypothetical protein [Pichia pastoris GS115] gi|238032643|emb|CAY70666.1| Hypothetical protein PAS_chr3_0619 [Pichia pastoris GS115] Length = 211 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + L + + ++ + + H R+ G C+ C C Sbjct: 64 EIFRGLYITLEMYFR--APYTIYYPFEKGPVSPRFRGEHALRRYPSGEERCIACKLCEAV 121 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 122 CPAQAITIEAEERIDGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 163 Query: 240 G 240 Sbjct: 164 D 164 >gi|237751588|ref|ZP_04582068.1| NADH-ubiquinone oxidoreductase [Helicobacter bilis ATCC 43879] gi|229372954|gb|EEO23345.1| NADH-ubiquinone oxidoreductase [Helicobacter bilis ATCC 43879] Length = 206 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 36/121 (29%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +IK L + + F+S+ +I + P + + R G C+ C C Sbjct: 43 GADIIKGLGLTIKEFFSKPVTI-NYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCE 101 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R L E + R L RC C + C Sbjct: 102 KICTSNCI---------------RILTH---EGEDGRKKIDSYTINLGRCIYCGLCAEVC 143 Query: 238 P 238 P Sbjct: 144 P 144 >gi|121593385|ref|YP_985281.1| NADH dehydrogenase subunit I [Acidovorax sp. JS42] gi|156632699|sp|A1W4N0|NUOI_ACISJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|120605465|gb|ABM41205.1| NADH dehydrogenase subunit I [Acidovorax sp. JS42] Length = 170 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 34 YTFRRKVTVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPAVAITIESDVR 93 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 94 ADGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 123 >gi|108805510|ref|YP_645447.1| FAD linked oxidase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108766753|gb|ABG05635.1| FAD linked oxidase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 1024 Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 42/155 (27%), Gaps = 18/155 (11%) Query: 94 GTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKE 153 G LA ++ K I + VV+ R + + + Sbjct: 507 GEELLAAFREFKAIWDPDW-------KMNPGKVVEPYRITENLRFGKDYSPREPERL--- 556 Query: 154 LLQSHEDRQKIDGLYE-CVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 ED CV C T CPSY + + ++ Sbjct: 557 YFAYPEDHGSFSHATMRCVGAGKCRDIDSGTMCPSYMVTLEEEHSTRGRARVLHEMLRGE 616 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +G R + D L C + C CP ++ Sbjct: 617 TITEGFRSREVFDA--LDLCLSCKGCKGDCPVDVD 649 >gi|332671079|ref|YP_004454087.1| hydrogenase, Fe-only [Cellulomonas fimi ATCC 484] gi|332340117|gb|AEE46700.1| hydrogenase, Fe-only [Cellulomonas fimi ATCC 484] Length = 1088 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 14/90 (15%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + + + +C+ C C +C + + D Sbjct: 610 HVRPWTPVAQDHPFIVRDHNKCISCGLCVAACAQVE-----------GVDVLAFQFDGGR 658 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 G R D P L C + C ++CP Sbjct: 659 LTVGTRDDQ---PLGLTDCVSCGQCVRACP 685 >gi|317484378|ref|ZP_07943297.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Bilophila wadsworthia 3_1_6] gi|316924386|gb|EFV45553.1| respiratory-chain NADH dehydrogenase 51 kDa subunit [Bilophila wadsworthia 3_1_6] Length = 445 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 15/97 (15%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR-WLIDSRDEFQGERLDNL 218 + + C+ C CS CP + P + R + ++ + RL L Sbjct: 247 NFMRRRAASACIQCRSCSELCPRHLLG-----HPFETHRVMRAFGSNAELTAEAGRLALL 301 Query: 219 EDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMML 254 C C CP GL+P + IK L Sbjct: 302 --------CCDCGVCEHVACPMGLSPRRINQAIKNEL 330 >gi|238762546|ref|ZP_04623516.1| Pyruvate-flavodoxin oxidoreductase [Yersinia kristensenii ATCC 33638] gi|238699191|gb|EEP91938.1| Pyruvate-flavodoxin oxidoreductase [Yersinia kristensenii ATCC 33638] Length = 1177 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 27/95 (28%), Gaps = 11/95 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLID 205 + ++ + I C C C +CP + + LG + Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPNAMLG--APESLQSLDVK 727 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +RD + + + C C + CP Sbjct: 728 ARDMRGQKYVLQVAPED----CTGCNLCYEVCPAK 758 >gi|258516935|ref|YP_003193157.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] gi|257780640|gb|ACV64534.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] Length = 677 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 34/199 (17%) Query: 52 LDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMN---IDGTNTLACVKDMKDIK 108 +D+ MV Y++ D + CR G + G + ++ ++++ Sbjct: 459 MDDRDCMVDIARFYVEFAQDESCGRCTPCRVGTKRLLEILQRITKGEGEMEDLRLLEELS 518 Query: 109 GAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLY 168 I V L + V + + + I P + L + Sbjct: 519 QDIKVASLCGLGQTAPNPVLSTLRFFRDEYIAHIRDKHCPAGVCKDLLH-----YLVLED 573 Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ C C+ +CP + +R P + DP + C Sbjct: 574 QCIACGICAKACPVDAISGERKKPPYKI-----------------------DPEK---CI 607 Query: 229 TIMNCTQSCPKGLNPAKAI 247 C + CPK + +I Sbjct: 608 RCGACMEKCPKDVIIRGSI 626 >gi|33239635|ref|NP_874577.1| NADH dehydrogenase subunit I [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81712853|sp|Q7VE31|NDHI_PROMA RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|33237160|gb|AAP99229.1| NAD(P)H-quinone oxidoreductase subunit I [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 219 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +++ L V H + +++ + + P +E +C+ C C Sbjct: 19 GKYLLQGLAVTFDHMRRRPITVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|309792297|ref|ZP_07686769.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Oscillochloris trichoides DG6] gi|308225838|gb|EFO79594.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Oscillochloris trichoides DG6] Length = 1182 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 7/104 (6%) Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA 199 P+ T + ++ + C+ C C+ CP + + P L A Sbjct: 662 MPFDGTYPTATTQWEKRNLALEIPVWDEKICIQCGKCAFVCP-HAVIRSKVYQPDALAGA 720 Query: 200 YRWL--IDSR-DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +D+R E G+R P C C + CP Sbjct: 721 PDTFKSVDARFKELPGQRYTLQVSPE---DCTGCALCVEVCPVK 761 >gi|308064001|gb|ADO05888.1| D-lactate dehydrogenase [Helicobacter pylori Sat464] Length = 946 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 32/140 (22%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPDGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL------------DNLEDPFRLYR-- 226 PS D L P + +R + E ER+ + L++ L Sbjct: 557 PS----KDLSLTPRQRIVIHREI-----ERLKERVSQGHHKDQILLDELLKESEYLAHAT 607 Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C+ CP G++ K Sbjct: 608 CAVCHMCSMLCPLGIDTGKI 627 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERVCPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|217033587|ref|ZP_03439015.1| hypothetical protein HP9810_899g23 [Helicobacter pylori 98-10] gi|216943933|gb|EEC23367.1| hypothetical protein HP9810_899g23 [Helicobacter pylori 98-10] Length = 844 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|323700438|ref|ZP_08112350.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio sp. ND132] gi|323460370|gb|EGB16235.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfovibrio desulfuricans ND132] Length = 439 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 168 YECVMCACCSTSCPSYWWNSDR--YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 C+ C CS C Y + + Y Q L+D + +R+ + Sbjct: 47 ETCMRCGLCSQGCHFYMSHDNDPSYSPVNKATQTMYELMDKKGRVSPQRIYEMAQ-MAYT 105 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKM 252 C+ C CP G++ ++ ++ Sbjct: 106 ECNLCKRCAHYCPIGIDTGYIMSMVRR 132 >gi|319787435|ref|YP_004146910.1| NADH-quinone oxidoreductase, chain I [Pseudoxanthomonas suwonensis 11-1] gi|317465947|gb|ADV27679.1| NADH-quinone oxidoreductase, chain I [Pseudoxanthomonas suwonensis 11-1] Length = 162 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 35/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K L + + + + H R+ +G C+ C C Sbjct: 15 ELVKGLALTFRYLFRP--KYTMMYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ D + R+ ID L++C C +SCP Sbjct: 73 CPALAITIDSARREDGTRRTTRYDID------------------LFKCIYCGFCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|294616487|ref|ZP_06696268.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1636] gi|291590635|gb|EFF22363.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1636] Length = 1230 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 8/147 (5%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + + ++ + V + L + +Q ++ + S Sbjct: 616 AIPEHWRTLEMPEKINKRNTGYVQEILEPVNAQEGNQLSVGTLVANGMTTGEMPLGMASM 675 Query: 159 EDR-----QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 E R C MC C+ CP + +++ G Sbjct: 676 EKRGVALEVPEWISDRCTMCNECAFVCPHAAIRPFLADEEEMEEAPEGFIVREMRGADGV 735 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + C C ++CP Sbjct: 736 KYRIQV---SVEDCTGCGLCVEACPAK 759 >gi|262066343|ref|ZP_06025955.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Fusobacterium periodonticum ATCC 33693] gi|291379907|gb|EFE87425.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Fusobacterium periodonticum ATCC 33693] Length = 1188 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 5/78 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L +C+ C CS CP +L +A + S + G+ L+NL ++ Sbjct: 696 WNLDKCIQCNQCSYVCP--HAAIRSFLIT-DEEKAASPIEFSTLKANGKGLENLSYRIQV 752 Query: 225 Y--RCHTIMNCTQSCPKG 240 C +C CP Sbjct: 753 TPLDCTGCGSCANVCPAK 770 >gi|237739850|ref|ZP_04570331.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium sp. 2_1_31] gi|229423458|gb|EEO38505.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium sp. 2_1_31] Length = 1188 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 5/78 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L +C+ C CS CP +L +A + S + G+ L+NL ++ Sbjct: 696 WNLDKCIQCNQCSYVCP--HAAIRSFLIT-DEEKAASPIEFSTLKANGKGLENLSYRIQV 752 Query: 225 Y--RCHTIMNCTQSCPKG 240 C +C CP Sbjct: 753 TPLDCTGCGSCANVCPAK 770 >gi|229590219|ref|YP_002872338.1| putative ferredoxin [Pseudomonas fluorescens SBW25] gi|229362085|emb|CAY48987.1| putative ferredoxin [Pseudomonas fluorescens SBW25] Length = 469 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 5/73 (6%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMN 232 A C CP Y L +Y +R E +G R ++ L C Sbjct: 218 AVCMHMCP-YARFQSVMFDKDTLTISYDV---ARGEHRGPRKREVKPADVGLGDCIDCQL 273 Query: 233 CTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 274 CVQVCPTGIDIRD 286 >gi|168180969|ref|ZP_02615633.1| cysteine-rich domain protein [Clostridium botulinum NCTC 2916] gi|182668340|gb|EDT80319.1| cysteine-rich domain protein [Clostridium botulinum NCTC 2916] Length = 381 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 16/111 (14%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K + + + D +C+ C C +C + R + Sbjct: 1 MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGKILEERNFEAT 60 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 61 LP----------------YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 95 >gi|167034819|ref|YP_001670050.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida GB-1] gi|166861307|gb|ABY99714.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida GB-1] Length = 472 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R + + L C C Sbjct: 223 CVYMCPYARFQSVMFDKDTLIVSY-----DPRRGETRGPRKKDADYKAQGLGDCIDCTMC 277 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 278 VQVCPTGIDIRD 289 >gi|52352363|gb|AAU43653.1| Fe-S oxidoreductases [uncultured archaeon GZfos23H7] Length = 380 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 22/122 (18%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTS-----------CPSYWWNSDRYLGPAILLQAYR 201 ++ + + + ++ CV C CS + CPS + + ++ +R Sbjct: 1 MYMELEREEEILSAIHHCVKCKLCSIASFHPNAEWLPLCPSGQYYGYQAFYAPGKMEIFR 60 Query: 202 WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA-----KAIAKIKMMLLD 256 +++ E L +Y C C + C K + +++ L Sbjct: 61 AILEGEITEPSEGL-----LNSVYACTVCGACYEKC-KQITSMELGAPDLFEEMRRELAS 114 Query: 257 RK 258 + Sbjct: 115 KG 116 >gi|325265309|ref|ZP_08132034.1| PduS protein [Clostridium sp. D5] gi|324029488|gb|EGB90778.1| PduS protein [Clostridium sp. D5] Length = 449 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 10/102 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQGERLDNL 218 R K C+ C C+ CP + ++ +R IDS +EF D + Sbjct: 246 QRIKHQARSACIQCRMCTDLCPRFQ-IGHSIKPHLVMRNVWREETIDSNEEFAKCYGDAV 304 Query: 219 EDPFRLYRCHTIMNCTQ-SCPKGLNPAKAIAKIKMMLLDRKI 259 C + C SCP GL+P + +K+ L +R I Sbjct: 305 N-------CCSCGVCEMFSCPMGLSPRQVNDYMKVQLRERGI 339 >gi|303247146|ref|ZP_07333421.1| FAD dependent oxidoreductase [Desulfovibrio fructosovorans JJ] gi|302491572|gb|EFL51457.1| FAD dependent oxidoreductase [Desulfovibrio fructosovorans JJ] Length = 442 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 10/81 (12%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 +R + + +C+ C C +CP D G +A R + S Q LD + Sbjct: 101 NRPRYVDMDKCIGCRKCEYACPV--VVPDVEQGGFSGRKAIR-IPFSNAIPQKAVLDVTQ 157 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 C C CP G Sbjct: 158 -------CMLCGKCASVCPTG 171 >gi|291514609|emb|CBK63819.1| electron transport complex, RnfABCDGE type, C subunit [Alistipes shahii WAL 8301] Length = 443 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 18/93 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ CA C ++CP YL + + + L+ L Sbjct: 356 QRREATQCIKCAKCVSACPMGLEPY--YLSKMTQKKGW------------DELEALM--- 398 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + C C +CP L + K ++ Sbjct: 399 -ITSCIECGCCQSTCPAYLPLLDWVRLGKQTVM 430 >gi|295700706|ref|YP_003608599.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1002] gi|295439919|gb|ADG19088.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1002] Length = 1010 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 30/94 (31%), Gaps = 7/94 (7%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G L + + Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHLTRGRANTLRLAISGQLGESG--LASDDVKE 653 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C + C + CP G++ AK + + + Sbjct: 654 TLDLCVSCKGCKRDCPTGVDMAKFKIEARAARVK 687 >gi|255322973|ref|ZP_05364109.1| iron-sulfur cluster-binding domain protein [Campylobacter showae RM3277] gi|255299835|gb|EET79116.1| iron-sulfur cluster-binding domain protein [Campylobacter showae RM3277] Length = 557 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 26/113 (23%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 I L+ SPK + ++ +C C +CP+ Sbjct: 163 CYEIAGKSDEEIAAQLEAQSPKFKFKSHVHYDSTICQYHERRHEICGRCVEACPTVAILK 222 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + DE + +++ C C CP G Sbjct: 223 E-------------------DETKHLVFSHID-------CVNCGGCVSVCPSG 249 >gi|238792247|ref|ZP_04635882.1| Pyruvate-flavodoxin oxidoreductase [Yersinia intermedia ATCC 29909] gi|238728484|gb|EEQ20003.1| Pyruvate-flavodoxin oxidoreductase [Yersinia intermedia ATCC 29909] Length = 1178 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 9/94 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + I C C C +CP + + + P + A DS Sbjct: 670 TQWEKRNIAENIPIWQPDLCTQCNHCVAACP-HSAIRAKVVQPEAMSGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG 240 + D + L C C + CP Sbjct: 725 DVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAK 758 >gi|116622976|ref|YP_825132.1| NADH-quinone oxidoreductase subunit I [Candidatus Solibacter usitatus Ellin6076] gi|122253832|sp|Q01ZR8|NUOI1_SOLUE RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|116226138|gb|ABJ84847.1| NADH-quinone oxidoreductase, chain I [Candidatus Solibacter usitatus Ellin6076] Length = 167 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 17/106 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 PK + H ++ ++G+ +CV C C+ +CPS + Sbjct: 36 PDAPPKFEERFRGVHVLQRDVNGMEKCVACFLCAAACPSNCIYIE-----------AAEN 84 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D GER + + RC C ++CP AI Sbjct: 85 TDKIRMSGGERYAKVYNIDY-NRCIFCGYCVEACP-----TDAITH 124 >gi|297539097|ref|YP_003674866.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] gi|297258444|gb|ADI30289.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] Length = 505 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR----DEFQGE------RLD 216 + C + +Y+ P Q+ + D+ DE +GE R Sbjct: 201 FWVCFYGFATYGNAGFMREQVCKYMCPYARFQSAMFDDDTLIVTYDEARGEPRGGRSRKA 260 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 261 EVNTK-ALGSCIDCSLCVQVCPTGIDIRDGLQY 292 >gi|262402058|ref|ZP_06078622.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio sp. RC586] gi|262351704|gb|EEZ00836.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio sp. RC586] Length = 474 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 19/92 (20%), Gaps = 9/92 (9%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + C CP D+ A R + Sbjct: 212 AICTYANAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYNTARGEQRGPRPRKAEPK--- 268 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 269 ---ELGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|119489272|ref|ZP_01622079.1| NAD-reducing hydrogenase subunit U [Lyngbya sp. PCC 8106] gi|119454746|gb|EAW35891.1| NAD-reducing hydrogenase subunit U [Lyngbya sp. PCC 8106] Length = 238 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 43/165 (26%), Gaps = 19/165 (11%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 + +C + + + V L V +S+ + + + Sbjct: 56 GLNKLLPACITEVSEGMEVTTHTSQLQDYRKMVVELL-FSEGNHVCAVCVSNGNCELQDV 114 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKIDG---LYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + D C++C C C Sbjct: 115 AIEVGMDHTRFPYIFPKRDVDISHPQFGIDHNRCILCTRCVRVCDEIE------------ 162 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKG 240 A+ W + R + + L P+ + C + C +CP G Sbjct: 163 -GAHVWDVAGR-GADAKVITGLNQPWGQVSACTSCGKCVDACPTG 205 >gi|116749232|ref|YP_845919.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698296|gb|ABK17484.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 268 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 9/122 (7%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCP 181 D M F ++ + EP + + ++R + +C+ C C CP Sbjct: 115 DACECMKPFPDEYVAGEPGEGRPFGTVERIESLALDERFELWMAEFAKCIKCYGCRNICP 174 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + L + +S + RC C ++CP G+ Sbjct: 175 MCYCRECT-LESKDFVNIGSLPPESPIFHLTRAVHMA------GRCIDCGLCNEACPAGI 227 Query: 242 NP 243 Sbjct: 228 PV 229 Score = 35.1 bits (79), Expect = 8.5, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 7/68 (10%) Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD--NLEDPFRLYR-----CHTIM 231 +CP ++ + P + R ER++ L++ F L+ C Sbjct: 108 ACPQELADACECMKPFPDEYVAGEPGEGRPFGTVERIESLALDERFELWMAEFAKCIKCY 167 Query: 232 NCTQSCPK 239 C CP Sbjct: 168 GCRNICPM 175 >gi|300854120|ref|YP_003779104.1| pyruvate:ferredoxin oxidoreductase [Clostridium ljungdahlii DSM 13528] gi|300434235|gb|ADK14002.1| pyruvate:ferredoxin oxidoreductase [Clostridium ljungdahlii DSM 13528] Length = 1170 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C CS CP L L +++D + L Sbjct: 681 PEWQVDKCIQCNQCSFVCP--HAAIRPVLTTEEELAKAPQGFEAKDANGAKGLKFTMAIS 738 Query: 223 RLYRCHTIMNCTQSCPKG 240 L C NC CP Sbjct: 739 PL-DCSGCGNCEDVCPAK 755 >gi|301098846|ref|XP_002898515.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4] gi|262104940|gb|EEY62992.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4] Length = 211 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 39/147 (26%), Gaps = 20/147 (13%) Query: 96 NTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQH--RSIEPWLKTVSPKPAKE 153 N A K + + + D+ + H R + + Sbjct: 36 NIPAPGKQDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPR 95 Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 H R+ G C+ C C CP+ QA + R G Sbjct: 96 FRGEHALRRYPSGEERCIACKLCEAICPA---------------QAITIEAEPR--ADGA 138 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R D + +C C ++CP Sbjct: 139 RRTTSYDID-MTKCIYCGFCQEACPVD 164 >gi|291614142|ref|YP_003524299.1| hypothetical protein Slit_1679 [Sideroxydans lithotrophicus ES-1] gi|291584254|gb|ADE11912.1| protein of unknown function DUF224 cysteine-rich region domain protein [Sideroxydans lithotrophicus ES-1] Length = 509 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 47/173 (27%), Gaps = 19/173 (10%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHR-SIEPWLKTVSPKPAKELLQ 156 +A + I P K V + AK Sbjct: 1 MADITAPAYRTIPIIPALKPGSMEGKGPFVASDKLNEALGFPGQLVEDWHDRAIAKMGDL 60 Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-------------- 202 + R + CV C CS C + D P R Sbjct: 61 LSKYRSLKVFMDACVHCGACSDKCHYFIGTQDPKNMPVARQDLLRSVYRRYFTLPGKLFP 120 Query: 203 -LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L+ +RD E LD + F +C C+ CP G++ A+ + +L Sbjct: 121 KLVGARD-LTREVLDEWYNYFN--QCSECRRCSVFCPYGIDTAEITMAAREIL 170 >gi|217077179|ref|YP_002334895.1| domain of unknown function protein [Thermosipho africanus TCF52B] gi|217037032|gb|ACJ75554.1| domain of unknown function protein [Thermosipho africanus TCF52B] Length = 432 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 31/134 (23%) Query: 111 IAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE- 169 + P+ M+V + + ++ P + + + ++ + Sbjct: 323 VKTAPITSMNVSRKIANELKKQILNKEFFLTKPVASLPSKSDYKKLNTKSTKQEKVIKNE 382 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C+ C + + + D + ER C Sbjct: 383 CVNCGLCTGYCNALYIEN--------------------DTVKFERT----------NCTN 412 Query: 230 IMNCTQSCPKGLNP 243 C+ CP G+ Sbjct: 413 CGLCSDVCPVGIEL 426 >gi|189467141|ref|ZP_03015926.1| hypothetical protein BACINT_03525 [Bacteroides intestinalis DSM 17393] gi|224535655|ref|ZP_03676194.1| hypothetical protein BACCELL_00519 [Bacteroides cellulosilyticus DSM 14838] gi|189435405|gb|EDV04390.1| hypothetical protein BACINT_03525 [Bacteroides intestinalis DSM 17393] gi|224522728|gb|EEF91833.1| hypothetical protein BACCELL_00519 [Bacteroides cellulosilyticus DSM 14838] Length = 588 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 37/174 (21%), Gaps = 30/174 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFY----- 133 C C + ++G LA + + + + V+ +L++ Sbjct: 52 ASCRICVVEVEGRRNLAPACATRCTEGMVVRTSTLRVMNARKVVAELILSDHPNDCLTCP 111 Query: 134 -------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + + + +C+ C C + C Sbjct: 112 KCGNCELQTLALRFNIRRMPYNGGELSPRKREVTSSIVRNMDKCIFCRRCESVCNEVQTV 171 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + D C C CP G Sbjct: 172 GALGAIRRGFNTTIAPAFD----------KMMSDSE----CTYCGQCVAVCPVG 211 >gi|172035869|ref|YP_001802370.1| pyruvate oxidoreductase [Cyanothece sp. ATCC 51142] gi|171697323|gb|ACB50304.1| pyruvate oxidoreductase [Cyanothece sp. ATCC 51142] Length = 1210 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 32/132 (24%), Gaps = 5/132 (3%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPA----KELLQSHEDRQKIDGLYE 169 +P+P + V Q I K ++ + Sbjct: 633 HPIPDTAPAFIRDVLGKMMARQGEDIPVSALPCDGTYPSGTAKWEKRNVAQEIPVWDEDV 692 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQGERLDNLEDPFRLYRCH 228 CV C C CP S Y A+ + D++D + C Sbjct: 693 CVQCGKCVLVCPHAVIRSKVYEEAALSNAPESFKSADAKDLDWKKTELKFTIQVAAEDCT 752 Query: 229 TIMNCTQSCPKG 240 C CP Sbjct: 753 GCGVCVDVCPAK 764 >gi|312137716|ref|YP_004005052.1| fad-dependent oxidoreductase [Rhodococcus equi 103S] gi|311887055|emb|CBH46364.1| putative FAD-dependent oxidoreductase [Rhodococcus equi 103S] Length = 935 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 10/94 (10%) Query: 157 SHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 +D ++ C C CPSY + + + +++ Sbjct: 522 RDDDGDFAQAVHRCTGVGKCRADTTGAGGVMCPSYLATREEKDSTRGRARVLQEMVNGSL 581 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 G R + D L C + C CP G++ Sbjct: 582 VRDGWRSPEVHDA--LDLCLSCKGCASDCPTGVD 613 >gi|229101345|ref|ZP_04232089.1| formate dehydrogenase [Bacillus cereus Rock3-28] gi|228682050|gb|EEL36183.1| formate dehydrogenase [Bacillus cereus Rock3-28] Length = 978 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + +DG AC K+ + L + + + + Sbjct: 47 QTCDTCIVEVDGKLMRACSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 107 NGNCKVHNTVHMMEIEEQKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + W +D R + ++ D C + C CP Sbjct: 167 NETISID---------WNLD-RPRVIWDNGVSINDS----SCVSCGQCVTVCP 205 >gi|239616975|ref|YP_002940297.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] gi|239505806|gb|ACR79293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] Length = 335 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 32/108 (29%), Gaps = 21/108 (19%) Query: 168 YECVMCACCSTSCPS---YWWNSDRYLGPAILLQAY-----------RWLIDSRDEFQGE 213 C+ C C+ CP+ + + + ++ + + R E Sbjct: 224 DSCIECGGCNFVCPTCYCFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKR 283 Query: 214 -------RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + + + C C CP G++ + ++ + Sbjct: 284 FNHRYNCKFNYMVKQLSMSGCTGCGRCIDVCPAGIDIRNTMRVMREEM 331 >gi|270308199|ref|YP_003330257.1| NADH:quinone oxidoreductase subunit 1 (chain I) [Dehalococcoides sp. VS] gi|270154091|gb|ACZ61929.1| NADH:quinone oxidoreductase subunit 1 (chain I) [Dehalococcoides sp. VS] Length = 183 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 18/102 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 PW+ P+ + + Q I C+ C C+ +CP N + Sbjct: 21 HLFRPWITAQYPEEKLTMSKRIRGTQVIWVKETCIACLACARACPVKAINMEV------- 73 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SR E + ++D++ F L C C +SCP Sbjct: 74 ---------SRGEDRKLKVDHMSIDFGL--CVFCGLCVESCP 104 >gi|115350949|ref|YP_772788.1| formate dehydrogenase subunit alpha [Burkholderia ambifaria AMMD] gi|115280937|gb|ABI86454.1| formate dehydrogenase alpha subunit [Burkholderia ambifaria AMMD] Length = 983 Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR ++ D Sbjct: 187 YFTYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFESRVAAGES--ESFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|312887264|ref|ZP_07746867.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Mucilaginibacter paludis DSM 18603] gi|311300222|gb|EFQ77288.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Mucilaginibacter paludis DSM 18603] Length = 1191 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 15/97 (15%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 ++ D + C+ C CS CP + ++ +L D+ ++FQ Sbjct: 680 WEKRNISDVIAVWDADNCIQCGNCSFVCP-HGVIRSKF-------YHQDYLADAPEDFQS 731 Query: 213 ERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLN 242 ++ P Y C C + CP + Sbjct: 732 SPINARGFPQTRYTLQVYAEDCTGCNLCAEVCPVLIP 768 >gi|307328629|ref|ZP_07607802.1| NADH-quinone oxidoreductase, chain I [Streptomyces violaceusniger Tu 4113] gi|306885741|gb|EFN16754.1| NADH-quinone oxidoreductase, chain I [Streptomyces violaceusniger Tu 4113] Length = 207 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 A H+ + DGL +C+ C C+ +CP+ + Sbjct: 28 PEEKKPTAPRFHGRHQLNRHPDGLEKCIGCELCAWACPADAIYVEG-------------- 73 Query: 204 IDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCP 238 D+ DE + GER + L RC C ++CP Sbjct: 74 ADNTDEERYSPGERYGRVYQINYL-RCILCGLCVEACP 110 >gi|237737221|ref|ZP_04567702.1| glutamate synthase [Fusobacterium mortiferum ATCC 9817] gi|229421083|gb|EEO36130.1| glutamate synthase [Fusobacterium mortiferum ATCC 9817] Length = 760 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIKM 252 RC N C + CP ++ I +IK Sbjct: 335 RCLNCKNPLCVKECPVSIDIPAFIQEIKR 363 >gi|229591969|ref|YP_002874088.1| putative ferredoxin [Pseudomonas fluorescens SBW25] gi|229363835|emb|CAY51284.1| putative ferredoxin [Pseudomonas fluorescens SBW25] Length = 475 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R ++ L C C Sbjct: 226 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGEVRGPRKKGIDYKAQGLGDCIDCTMC 280 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 281 VQVCPTGIDIRD 292 >gi|229095238|ref|ZP_04226230.1| formate dehydrogenase [Bacillus cereus Rock3-29] gi|229114186|ref|ZP_04243607.1| formate dehydrogenase [Bacillus cereus Rock1-3] gi|228669206|gb|EEL24627.1| formate dehydrogenase [Bacillus cereus Rock1-3] gi|228688097|gb|EEL41983.1| formate dehydrogenase [Bacillus cereus Rock3-29] Length = 978 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + +DG AC K+ + L + + + + Sbjct: 47 QTCDTCIVEVDGKLMRACSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 107 NGNCKVHNTVHMMEIEEQKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + W +D R + ++ D C + C CP Sbjct: 167 NETISID---------WNLD-RPRVIWDNGVSINDS----SCVSCGQCVTVCP 205 >gi|224418367|ref|ZP_03656373.1| hypothetical protein HcanM9_03720 [Helicobacter canadensis MIT 98-5491] gi|253827686|ref|ZP_04870571.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141897|ref|ZP_07804090.1| D-lactate dehydrogenase [Helicobacter canadensis MIT 98-5491] gi|253511092|gb|EES89751.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130928|gb|EFR48545.1| D-lactate dehydrogenase [Helicobacter canadensis MIT 98-5491] Length = 945 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 5/86 (5%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID---SRDEFQG-ERLDNLEDPFRL 224 +C+ C C CP+ + ++ + R S E + L N + + Sbjct: 540 KCMECGFCEKFCPTLGFTLTPRQRISVYQEICRLEAKENLSLQEQTELQELKNGYSYYGI 599 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKI 250 C T C CP ++ IAK+ Sbjct: 600 ETCATCSACANLCPLQID-TANIAKL 624 >gi|52550013|gb|AAU83862.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos34H10] Length = 799 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 19/116 (16%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 Q + K + L D + + +C++C C+ +CP+ + Sbjct: 373 DQVGEVAVRTALQMDKKRRSLKFILSDDEFKYYVNDCILCGGCTLACPNGLHIGEANKSA 432 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 A + L D F + C C Q C K + + K Sbjct: 433 AAGN-----------------IKPLADLFDI--CVGCGRCEQVCKKHIPIVDVMTK 469 >gi|21674072|ref|NP_662137.1| hydrogenase/sulfur reductase, beta subunit [Chlorobium tepidum TLS] gi|21647225|gb|AAM72479.1| hydrogenase/sulfur reductase, beta subunit [Chlorobium tepidum TLS] Length = 337 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 21/117 (17%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWN-----SDRYLGPAILLQAYRWLI----- 204 ++ E + D CV C C+ CP+ D Y G Sbjct: 216 KENFESQFWKDIALRCVGCGSCTFLCPTCHCFDIQDEGDTYQGIRRKNWDSCSFPLFTMH 275 Query: 205 ----DSRDEFQGERLDNLE-------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + R+ + F + C CT+ CP + + + I Sbjct: 276 TSGHNPRNTQSTRWRQRIMHKFNYYRGKFGVNSCSGCGRCTRQCPVDMGITETLQAI 332 >gi|89893052|ref|YP_516539.1| hypothetical protein DSY0306 [Desulfitobacterium hafniense Y51] gi|219666318|ref|YP_002456753.1| hypothetical protein Dhaf_0249 [Desulfitobacterium hafniense DCB-2] gi|89332500|dbj|BAE82095.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536578|gb|ACL18317.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfitobacterium hafniense DCB-2] Length = 537 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 14/93 (15%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLG-PAILLQAYRWLIDSRDEFQGERLDNLEDP- 221 + C C CS +C Y + + L P ++A R + G+ L L Sbjct: 101 MLSFEYCAKCDTCSNACHIYEGSGNNELYRPIFRVEALRKIYKKYFTTSGKLLGGLVGAD 160 Query: 222 ------------FRLYRCHTIMNCTQSCPKGLN 242 YRC+ C Q+CP GL+ Sbjct: 161 LEATWESIARLGESAYRCNLCRRCAQTCPLGLD 193 >gi|329964618|ref|ZP_08301672.1| FAD binding domain protein [Bacteroides fluxus YIT 12057] gi|328525018|gb|EGF52070.1| FAD binding domain protein [Bacteroides fluxus YIT 12057] Length = 972 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 8/103 (7%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNL 218 D + +C+ C C +C S + L + R + R + ERL L Sbjct: 557 DELRGGTEDKCIECGFCEVNCLSCGFT----LSSRQRIVLQREISRLRQSGKEPERLALL 612 Query: 219 EDPFRLYRCHTI---MNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 E ++ T C+ SCP G+N I+ L + Sbjct: 613 EKQYKYPGNQTCAGDGLCSMSCPMGINTGDLTHMIRQRALPKG 655 >gi|315657371|ref|ZP_07910253.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491843|gb|EFU81452.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 245 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + + + V +P + DGL +CV C C+ +CP+ Sbjct: 57 FGVTFRNFFRPYVTEQYPFEKVPTQPRYHGRHQL--NRYPDGLEKCVGCELCAWACPA-- 112 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A ++ GER + + L RC C ++CP Sbjct: 113 --DAIYVEAAANTPEAQY-------SAGERYGRVYEINYL-RCIFCGMCIEACP 156 >gi|217075100|gb|ACJ85910.1| unknown [Medicago truncatula] Length = 222 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 24/123 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L++ + +F+ ++ +I + + H R+ G C+ C C Sbjct: 75 ELVRGLMLTLKYFFDKNVTINYPFEKG--PLSPRFRGEHALRRYPTGEERCIACKLCEAI 132 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 133 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 172 Query: 238 PKG 240 P Sbjct: 173 PVD 175 >gi|209964581|ref|YP_002297496.1| nitrogen fixation protein fixG [Rhodospirillum centenum SW] gi|209958047|gb|ACI98683.1| nitrogen fixation protein fixG [Rhodospirillum centenum SW] Length = 496 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 5/81 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L C+ CP + + ++++ +W + R + P L Sbjct: 219 YLLAGWAREQVCTYMCPWPRFQAAMLDRDSMVVTYEKWRGEPRGGSKAG-----PAPEGL 273 Query: 225 YRCHTIMNCTQSCPKGLNPAK 245 C C +CP G++ Sbjct: 274 GDCIDCGQCIAACPTGIDIRD 294 >gi|84686203|ref|ZP_01014098.1| NAD-dependent formate dehydrogenase, alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84665730|gb|EAQ12205.1| NAD-dependent formate dehydrogenase, alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 971 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 13/94 (13%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 + + + + +C++C+ C +C + Sbjct: 167 REGDGNFRYIPKDESNPYFTYDPAKCIVCSRCVRACEEVQGTFALTIEGRGF-------- 218 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR G D F C + C Q+CP Sbjct: 219 DSRVSAGG-----AMDDFLSSDCVSCGACVQACP 247 >gi|116748267|ref|YP_844954.1| formate dehydrogenase [Syntrophobacter fumaroxidans MPOB] gi|116697331|gb|ABK16519.1| formate dehydrogenase, beta subunit (F420) [Syntrophobacter fumaroxidans MPOB] Length = 379 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 18/95 (18%) Query: 164 IDGLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + L CV C C +CP + ++YL A + D+ F Sbjct: 249 MSYLSNCVNCYNCRVACPVCYCRECVFLTDVFDHEPEQYLRWAKRKGVIKMPTDT-VFFH 307 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 RL ++ C C+ +CP + + Sbjct: 308 LTRLAHMST-----ACIGCGQCSNACPNNVPVMEL 337 >gi|315186948|gb|EFU20706.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Spirochaeta thermophila DSM 6578] Length = 583 Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 53/204 (25%), Gaps = 32/204 (15%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKDMKDIKGAI 111 G +LD + KI G CG C + + G+ + AC ++D I Sbjct: 16 PEGTSILDAAKQTQVKIPTLCHHPDLPAWGACGICVVKVAGSPKMLRACATPLEDGMEVI 75 Query: 112 A------------VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + L + R + P + + Sbjct: 76 THDPEIVQVRKTVIELILSTHPDDCLYCPRNQNCELQRLAAEFGVREQPYEKNIVDLPKD 135 Query: 160 DRQKIDGL--YECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 L +CV C C C S + +LG D + Sbjct: 136 SSTPSIVLDPSKCVKCGRCVNVCQSMQNVWALEFLGRG----------DGTRIAPAGDIA 185 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 + P C C+ CP G Sbjct: 186 LNDSP-----CIKCGQCSAHCPVG 204 >gi|295111644|emb|CBL28394.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [Synergistetes bacterium SGP1] Length = 1201 Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 25/84 (29%), Gaps = 11/84 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY---RWLIDSRDEFQGE---RLD 216 +C+ C CS CP +L A +A +D + + E R Sbjct: 689 PEWNGEKCIQCNQCSMVCP--HAAIRPFLLDAAEQEAAPKDFGAVDPKAKALKEAGYRYK 746 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 D C NC CP Sbjct: 747 IQVDTL---DCLGCGNCADICPVK 767 >gi|326437811|gb|EGD83381.1| Ferredoxin:4Fe-4S ferredoxin [Salpingoeca sp. ATCC 50818] Length = 483 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 23/169 (13%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSI 139 + +C + + + + + L +K ++ + Sbjct: 134 GGKKTVPACVTGVQDGMNVLTHTKEIEDEVQTLLALLRARHPMKCATCPVNGQCEFQDLL 193 Query: 140 EPWLKTVSPKPAKELLQSHEDRQKID-------GLYECVMCACCSTSCPSYWWNSDRYLG 192 + E +S R L +CV+C C +C G Sbjct: 194 MRYQVEEPAFFGHEDRKSAVGRTHDHSSPAIQLDLDKCVLCTRCVRACQEIQ-------G 246 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKG 240 +IL A R E + + C + CT CP G Sbjct: 247 MSILGIASR--------GPYESVSPIMGKEIADTPCISCGACTAVCPVG 287 >gi|257463783|ref|ZP_05628171.1| putative oxidoreductase [Fusobacterium sp. D12] Length = 460 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIKM 252 RC N C Q+CP +N I KI+ Sbjct: 39 RCLQCKNPLCVQACPVSINIPAFIQKIRE 67 >gi|237751586|ref|ZP_04582066.1| donor-ubiquinone reductase I [Helicobacter bilis ATCC 43879] gi|229372952|gb|EEO23343.1| donor-ubiquinone reductase I [Helicobacter bilis ATCC 43879] Length = 921 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 61/213 (28%), Gaps = 40/213 (18%) Query: 56 GPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKD-------- 106 G +LD N PT+ C C C + ++G +C +KD Sbjct: 15 GDTILDVARR-NNIQIPTICFLSGCSPTLACKMCMVEVNGKRVYSCNAKVKDGMEVVVHN 73 Query: 107 -IKGAIAVYPLPHMSVIKDL----VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 + V L Q ++ + T + +S+ Sbjct: 74 EELQKDRNEIMTTYCVNHPLECGVCDKSGECELQDFTLYTKVDTQQFGLQEADKKSYSFA 133 Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 Q C+MC C T+C L+A + + + D ++ +DP Sbjct: 134 QSFYDPALCIMCERCVTTCKDNI--------GEANLKAGKANLFTPDNYKD---SMGKDP 182 Query: 222 FRLYR--------------CHTIMNCTQSCPKG 240 + ++ C C CP G Sbjct: 183 YSVWAKRQKGLIEFVGKNECKDCGECISVCPVG 215 >gi|225706152|gb|ACO08922.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Osmerus mordax] Length = 210 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + MS+ + + +I + + H R+ G C+ C Sbjct: 59 LLWTELFRGLGMTMSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 116 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 117 CEAICPAQAITIEAEPRSDGSRRTTRYDIDMT------------------KCIYCGFCQE 158 Query: 236 SCPKG 240 +CP Sbjct: 159 ACPVD 163 >gi|158634518|gb|ABW76111.1| pyruvate:ferredoxin oxidoreductase [Retortamonas sp. Vale] Length = 1194 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 22/80 (27%), Gaps = 8/80 (10%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C ++CP YL A + + S + F+ Sbjct: 700 WDESTCIQCNQCVSACP--HAVIRPYLVNAEEEEKLPGNVRSHLVPSKNMTAKEKGEFKF 757 Query: 225 ------YRCHTIMNCTQSCP 238 Y C C CP Sbjct: 758 IIQPSPYDCTGCGVCVAVCP 777 >gi|159902717|ref|YP_001550061.1| NADH dehydrogenase subunit I [Prochlorococcus marinus str. MIT 9211] gi|226724532|sp|A9BD19|NDHI_PROM4 RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|159887893|gb|ABX08107.1| putative NADH Dehydrogenase subunit [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 +++ L V H + +++ + + P +E +C+ C C Sbjct: 19 GKYLLQGLAVTFDHMGRRPITVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|225850949|ref|YP_002731183.1| NADH-quinone oxidoreductase subunit i [Persephonella marina EX-H1] gi|225646012|gb|ACO04198.1| NADH-quinone oxidoreductase subunit i [Persephonella marina EX-H1] Length = 200 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 28/107 (26%), Gaps = 17/107 (15%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 + + K + G CV C C +CP P + Sbjct: 60 HRVKNGKEPPSFKVIEKFMDIDTGESRCVACYMCMQACPV----------PFLFNIEAVQ 109 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L D R + L C CT++CP I + Sbjct: 110 LPDG-------RKKVVRFDMNLLNCMYCGLCTEACPVDCLIMTDIYE 149 >gi|170759291|ref|YP_001786929.1| aldo/keto reductase family oxidoreductase [Clostridium botulinum A3 str. Loch Maree] gi|169406280|gb|ACA54691.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A3 str. Loch Maree] Length = 378 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 6/134 (4%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + M H + + +L+ + +C C C Sbjct: 245 PEITVVLSGMEKMDHIKENIKESNNGYANSLTEKELDLINEVKQIYIDRIKVDCTSCRYC 304 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP + L D + + + + L +L + C C ++ Sbjct: 305 MP-CPFGVNIPKNF----KYLNIASLYNDVK-KQKKKYLASLNKKEKASNCKKCGKCEEA 358 Query: 237 CPKGLNPAKAIAKI 250 CP+ + + ++ Sbjct: 359 CPQNIKIRNMLEEV 372 >gi|148380567|ref|YP_001255108.1| cysteine-rich domain protein [Clostridium botulinum A str. ATCC 3502] gi|153931632|ref|YP_001384854.1| hypothetical protein CLB_2553 [Clostridium botulinum A str. ATCC 19397] gi|153935083|ref|YP_001388324.1| hypothetical protein CLC_2484 [Clostridium botulinum A str. Hall] gi|148290051|emb|CAL84170.1| putative iron-sulfur protein [Clostridium botulinum A str. ATCC 3502] gi|152927676|gb|ABS33176.1| cysteine-rich domain protein [Clostridium botulinum A str. ATCC 19397] gi|152930997|gb|ABS36496.1| cysteine-rich domain protein [Clostridium botulinum A str. Hall] Length = 381 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA ++++ +++ Sbjct: 63 YSCAICGKCREVCPKDLNMAKAFMELRVETVEQ 95 >gi|330808474|ref|YP_004352936.1| cytochrome c oxidase accessory protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376582|gb|AEA67932.1| Putative cytochrome c oxidase accessory protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 471 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R ++ L C C Sbjct: 222 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGESRGPRKKGVDYKALGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|320160247|ref|YP_004173471.1| NADH-quinone oxidoreductase subunit I [Anaerolinea thermophila UNI-1] gi|319994100|dbj|BAJ62871.1| NADH-quinone oxidoreductase chain I [Anaerolinea thermophila UNI-1] Length = 163 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L+ + + + +I+ H ++ +GL +C+ C+ C+ +C Sbjct: 1 MFKGLLTTLKEWTGKPVTIQY--PEEKRPVRTRFKGRHVLKRYENGLEKCIGCSLCAAAC 58 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ ++ A R+ GER + + L RC C +CP Sbjct: 59 PA----DAIFVEAAENTDDERYSP-------GERYARVYEINML-RCIFCGFCEDACP-- 104 Query: 241 LNPAKAI 247 +AI Sbjct: 105 ---TEAI 108 >gi|311747746|ref|ZP_07721531.1| D-lactate dehydrogenase (cytochrome) [Algoriphagus sp. PR1] gi|311302701|gb|EAZ80044.2| D-lactate dehydrogenase (cytochrome) [Algoriphagus sp. PR1] Length = 973 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 34/129 (26%), Gaps = 17/129 (13%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-------TSCPSYWWNSD 188 + V L + +C C T CPSY + Sbjct: 526 MNKFLRYEPDVETPVHPTALDFSAVGGILRMAEKCNGSGDCRKLPGSGGTMCPSYMATKN 585 Query: 189 RYLGPAILLQAYR--WLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R +D + ++ E + C + CT CP ++ Sbjct: 586 EKDTTRGRANTLREFLTMD----KKENAFNHPEIKEAMDLCLSCKGCTSECPSNVD---- 637 Query: 247 IAKIKMMLL 255 +A +K L Sbjct: 638 MASMKAEFL 646 >gi|307719055|ref|YP_003874587.1| hypothetical protein STHERM_c13740 [Spirochaeta thermophila DSM 6192] gi|306532780|gb|ADN02314.1| hypothetical protein STHERM_c13740 [Spirochaeta thermophila DSM 6192] Length = 583 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 53/204 (25%), Gaps = 32/204 (15%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKDMKDIKGAI 111 G +LD ++ KI G CG C + + G+ + AC ++D I Sbjct: 16 PEGTSILDAAKKMQVKIPTLCHHPDLPAWGACGICVVKVAGSPKMLRACATPLEDGMEVI 75 Query: 112 A------------VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + L + R + P + + Sbjct: 76 THDPEIVQVRKTVIELILSTHPDDCLYCPRNQNCELQRLAAEFGVREQPYEKNIVELPKD 135 Query: 160 DRQKIDGL--YECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 L +CV C C C + +LG D + Sbjct: 136 TSTPSLVLDPSKCVKCGRCVNVCQGMQNVWALEFLGRG----------DGTRIAPAGDIA 185 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKG 240 + P C C+ CP G Sbjct: 186 LNDSP-----CIKCGQCSAHCPVG 204 >gi|257463641|ref|ZP_05628032.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium sp. D12] gi|317061193|ref|ZP_07925678.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium sp. D12] gi|313686869|gb|EFS23704.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium sp. D12] Length = 1193 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 8/85 (9%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 +C+ C CS CP +L A D+ + G+ LD L ++ Sbjct: 696 WDSTKCIQCNQCSYVCP--HAVIRPFLVSEEEKAASPVAFDTL-KAMGKGLDGLTYRIQV 752 Query: 225 Y--RCHTIMNCTQSCPKGLNPAKAI 247 C +C CP P KAI Sbjct: 753 SPLDCVGCGSCVNVCPA---PGKAI 774 >gi|237736240|ref|ZP_04566721.1| predicted protein [Fusobacterium mortiferum ATCC 9817] gi|229421588|gb|EEO36635.1| predicted protein [Fusobacterium mortiferum ATCC 9817] Length = 291 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 50/188 (26%), Gaps = 20/188 (10%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNT--LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDM 129 +L + R+ + + G + K+ K K ++P P VV Sbjct: 82 DSLGFNQLLRDNRIERDKVYVWGIPCSGMLDSKNKKYTKCENCLHPNP--------VVYD 133 Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR-QKIDGLYECVMCACCSTSCPSYWWNSD 188 + +I + E + + E + C+ C C CP+ Sbjct: 134 ELIGEEINNIGNPEERFREVKILENMSADERYEFWSNEFSRCIRCNACRNICPACSCVKC 193 Query: 189 RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPA---- 244 + I + + E + C C + CP + Sbjct: 194 IFDNDDINVLGKANI-----ETETSFFHLTRAYHVAGNCVDCGECARVCPAHIRLDLLNR 248 Query: 245 KAIAKIKM 252 K I + Sbjct: 249 KIIKDLNE 256 >gi|291287574|ref|YP_003504390.1| ferredoxin-dependent glutamate synthase [Denitrovibrio acetiphilus DSM 12809] gi|290884734|gb|ADD68434.1| ferredoxin-dependent glutamate synthase [Denitrovibrio acetiphilus DSM 12809] Length = 546 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNL 218 D + C +C C +CP + + + + + + EF+ + + Sbjct: 15 DWKISYRPDRCTLCGKCVAACPFKAI--EAGVEKRRKVVSDHLTPEPKVEFKTIPVIRQV 72 Query: 219 EDPFRLYRCHTIMNCTQSCPKG-LNP 243 + + C C + CP +NP Sbjct: 73 VNEYEF--CRGCGICERVCPNEAINP 96 >gi|227499096|ref|ZP_03929233.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904545|gb|EEH90463.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 1168 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 27/104 (25%), Gaps = 3/104 (2%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + ++ + R +C+ C CS CP L + Sbjct: 656 FVPYSNGMFPQGTSRHEKRGTSVRVSSWNPQKCIQCNMCSYVCP--HAILRPMLLTEEEV 713 Query: 198 Q-AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A + D + + C +C CP G Sbjct: 714 KGAPEGMKDIPAKGKDVEPYRFHIAVSTLDCTGCGSCANVCPVG 757 >gi|218129266|ref|ZP_03458070.1| hypothetical protein BACEGG_00843 [Bacteroides eggerthii DSM 20697] gi|317475238|ref|ZP_07934505.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217988644|gb|EEC54964.1| hypothetical protein BACEGG_00843 [Bacteroides eggerthii DSM 20697] gi|316908691|gb|EFV30378.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 170 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + K ++ + + CV C C +CP+ Sbjct: 25 MKTTMTVFCRKKTTEQYPENRKTLKLSERFRGTLTMPHNEQNEHHCVACGLCQMACPN-- 82 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ I++ D + + L + L C C +CP Sbjct: 83 ----------DTIKVTSETIETEDGKKKKILAKY--EYDLGSCIFCQLCVNACP 124 >gi|158321412|ref|YP_001513919.1| respiratory-chain NADH dehydrogenase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141611|gb|ABW19923.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Alkaliphilus oremlandii OhILAs] Length = 442 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 14/124 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + ++ + + ++ K C C C+ CP Y D + P + Sbjct: 221 KKNKGFVILKKEHNLIKRKSTTLEQAKRVNKSACEQCRMCTDLCPRYLLGHD--MQPHKM 278 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT-QSCPKGLNPAKAIAKIKMMLL 255 + A + +D+ + + +L C C +CP GL P A + K L+ Sbjct: 279 MNALNYNLDNVEGQKTAQL-----------CCQCNLCELFACPAGLYPKFANSYFKEKLM 327 Query: 256 DRKI 259 + + Sbjct: 328 AQNL 331 >gi|52550495|gb|AAU84344.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos9D8] Length = 796 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 19/90 (21%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + + +C +C C+ +CP+ + A + L Sbjct: 396 DDEFTRYVNDCNLCGSCTLACPTGLRIGEANKSAAAGN-----------------VKPLA 438 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 D F L C C Q C K + + K Sbjct: 439 DLFDL--CVGCGRCEQVCKKHIPIVDVVIK 466 >gi|289548210|ref|YP_003473198.1| hypothetical protein Thal_0437 [Thermocrinis albus DSM 14484] gi|289181827|gb|ADC89071.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermocrinis albus DSM 14484] Length = 404 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 9/91 (9%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +CV C C + CP+Y Y L ++ E ++ C Sbjct: 14 KCVKCGLCKSVCPTYRQEEGSY--ARGRLALAEMVVKGDLPLTQEVAKQWDE------CA 65 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C CP + + +A + +K+ Sbjct: 66 MCRRCEWICPNDVQYKEIMAFARHHQ-KKKL 95 >gi|242398273|ref|YP_002993697.1| NiFe hydrogenase I, subunit beta [Thermococcus sibiricus MM 739] gi|242264666|gb|ACS89348.1| NiFe hydrogenase I, subunit beta [Thermococcus sibiricus MM 739] Length = 375 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 43/157 (27%), Gaps = 27/157 (17%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 +D+ +H+ + L E + C+ C C+ +CP Sbjct: 195 TQDVCEFREFENKKHQMFKY--HEDWGNLRYLLEMEMEHPMWNEQSELCLACGNCNLTCP 252 Query: 182 S---YWWNSDRYLGPAILLQAYRW-------------LIDSRDEFQGERLD------NLE 219 + Y L + RW + R + ++ + Sbjct: 253 TCRCYEVQDIPNLDGDTGARIRRWDSCQLRSHGLVAGNHNFRPTKKSRFMNRYLCKNSYN 312 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKA---IAKIKMM 253 + + C CT CP ++ + I +K Sbjct: 313 EKLGISYCVGCGRCTYFCPAEISFVENLRTILGLKED 349 >gi|217979763|ref|YP_002363910.1| cytochrome c oxidase accessory protein CcoG [Methylocella silvestris BL2] gi|217505139|gb|ACK52548.1| cytochrome c oxidase accessory protein CcoG [Methylocella silvestris BL2] Length = 492 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + A+ + + R+ + +L + ++ Sbjct: 219 YVLAGFMREQVCLYMCPWPRIQAALTDENALNVTYRYDRGEPRESLKKSKL-LRGEGQKV 277 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 278 GDCIDCGQCVAVCPTGVDI 296 >gi|71734806|ref|YP_275502.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555359|gb|AAZ34570.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 470 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLED-PFRLYRCHTIMNC 233 C CP Y L+ +Y D R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY----DPNRGETRGPRKKEADHRAQGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|257468708|ref|ZP_05632802.1| sulfite reductase, subunit A [Fusobacterium ulcerans ATCC 49185] gi|317062963|ref|ZP_07927448.1| sulfite reductase [Fusobacterium ulcerans ATCC 49185] gi|313688639|gb|EFS25474.1| sulfite reductase [Fusobacterium ulcerans ATCC 49185] Length = 335 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 26/121 (21%) Query: 163 KIDGLYECVMCACCSTSCPSYW--------WNSDRYLGPAILLQAYRWLIDSRDEF---- 210 + C+ C C+ CP+ + ++ G + A + D E Sbjct: 216 WKEYNERCIACGRCNFVCPTCTCFTMQDIFYKDNKNTGERRRVWASCHI-DGYTEMAGNI 274 Query: 211 -----QGER-----LDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +GER L + D F C C Q CP+ ++ + I K+ + + Sbjct: 275 SFRKTKGERMRFKVLHKVHDFKKRFGYNMCTGCGRCDQVCPEYISFSNCINKLNQKIEEV 334 Query: 258 K 258 K Sbjct: 335 K 335 >gi|270307598|ref|YP_003329656.1| [Fe] hydrogenase, Hym C subunit [Dehalococcoides sp. VS] gi|270153490|gb|ACZ61328.1| [Fe] hydrogenase, Hym C subunit [Dehalococcoides sp. VS] Length = 573 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 43/217 (19%), Gaps = 35/217 (16%) Query: 45 MDTYYVDLDN----CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 M T +D G ++ I C C + I+G LA Sbjct: 1 MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT 60 Query: 101 VKDMK--------------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 K + L + + R Sbjct: 61 SCSRKVAEGMKINTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E D + + C+ C C C + A ++ Sbjct: 121 LRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDIQT-----------VNAIGFI 169 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D +D C C CP G Sbjct: 170 NKGPDTMVATSMDR---GMGNVACANCGQCILVCPVG 203 >gi|124024945|ref|YP_001014061.1| NADH dehydrogenase subunit I [Prochlorococcus marinus str. NATL1A] gi|156632623|sp|A2BZY6|NDHI_PROM1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|123960013|gb|ABM74796.1| putative NADH Dehydrogenase subunit [Prochlorococcus marinus str. NATL1A] Length = 218 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 24/114 (21%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V H + +++ + + P +E +C+ C C CP Sbjct: 26 LGVTFDHMRRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCVRVCPINL 78 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D W+++ + + R +++ C NC + CP Sbjct: 79 PVVD-------------WVMNKETKKKELRNYSID----FGACIFCGNCVEYCP 115 >gi|14590194|ref|NP_142259.1| hypothetical protein PH0268 [Pyrococcus horikoshii OT3] gi|3256657|dbj|BAA29340.1| 630aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 630 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 24/81 (29%), Gaps = 30/81 (37%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 YECV C C TSCP E +R + L Sbjct: 573 RAYECVGCGVCITSCPEEAI-----------------------ELDEKRKKIVV---SLE 606 Query: 226 RCHTIMNCTQSCP----KGLN 242 +C C CP KG++ Sbjct: 607 KCTHCRECMNVCPLVVIKGVD 627 >gi|14250944|emb|CAC39239.1| FdhA-II protein [Eubacterium acidaminophilum] Length = 897 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 17/79 (21%), Gaps = 14/79 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 I +C+ C C C L D E Sbjct: 138 FYISDQNKCISCGRCVRVCNELQCTGAIDLAERGFDTHVATPFDVDLEKSK--------- 188 Query: 222 FRLYRCHTIMNCTQSCPKG 240 C + NC CP G Sbjct: 189 -----CVSCGNCVAVCPVG 202 >gi|238793445|ref|ZP_04637070.1| Hydrogenase-4 component H [Yersinia intermedia ATCC 29909] gi|238727218|gb|EEQ18747.1| Hydrogenase-4 component H [Yersinia intermedia ATCC 29909] Length = 184 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + L Sbjct: 33 PQYDAEQCIACGACTMACPANALTMETDLASGTRQWQLF--------------------- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|320450384|ref|YP_004202480.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Thermus scotoductus SA-01] gi|320150553|gb|ADW21931.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Thermus scotoductus SA-01] Length = 1167 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 23/94 (24%), Gaps = 2/94 (2%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 A+ + + CV C C CP + + + L QA Sbjct: 663 PTGTARYEKRGIAEFIPTWDPQVCVQCGKCVLVCP-HAVIRAKVVPEEALAQAPEGFPH- 720 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R E C C + CP Sbjct: 721 RKAMWKELTGEFTLAISPGDCTGCSLCVEVCPAK 754 >gi|317180947|dbj|BAJ58733.1| D-lactate dehydrogenase [Helicobacter pylori F32] Length = 946 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 32/140 (22%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL--------------YR 226 PS D L P + +R + E ER+ + + ++ Sbjct: 557 PS----KDLSLTPRQRIVIHREI-----ERLKERVSHGHNEDQILLDELLKESEYLVHAT 607 Query: 227 CHTIMNCTQSCPKGLNPAKA 246 C C+ CP G++ K Sbjct: 608 CAVCHMCSMLCPLGIDTGKI 627 Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 9/43 (20%) Query: 221 PFRLYRCHTIMNCTQSCP-KGLNPA--------KAIAKIKMML 254 L C C + CP K L+ + I ++K + Sbjct: 540 EEHLDMCMECGFCERVCPSKDLSLTPRQRIVIHREIERLKERV 582 >gi|284162825|ref|YP_003401448.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Archaeoglobus profundus DSM 5631] gi|294862443|sp|P84622|HMED_ARCPA RecName: Full=Hdr-like menaquinol oxidoreductase iron-sulfur subunit; Short=Hme subunit D gi|284012822|gb|ADB58775.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Archaeoglobus profundus DSM 5631] Length = 557 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 21/151 (13%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 +P V +D+ + + I ++R + CV C Sbjct: 50 MPFGDVERDVFSEDWKLPENWKEI---------ILDSFKETLEKNRAFKVFMDICVRCGA 100 Query: 176 CSTSCPSYWWNSDRYLGPAIL------LQAYRWLIDSRDEFQ---GERLDNLEDPFRLYR 226 C+ C Y D P + + Y + I + + LD Y Sbjct: 101 CADKCHYYIGTGDPKNMPVMRAETVRSVYRYYFTIGGKLFGKWAGARPLDENVIKEWYYY 160 Query: 227 ---CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C+ CP G++ A+ + + ML Sbjct: 161 LLQCSLCRRCSLFCPYGIDTAEVVWWARRML 191 >gi|209737012|gb|ACI69375.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + MS+ + + +I + + H R+ G C+ C Sbjct: 59 LLWTELFRGLGMTMSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 116 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 117 CEAICPAQAITIEAEPRSDGSRRTTRYDIDMT------------------KCIYCGFCQE 158 Query: 236 SCPKG 240 +CP Sbjct: 159 ACPVD 163 >gi|197286368|ref|YP_002152240.1| hydrogenase 4 subunit H [Proteus mirabilis HI4320] gi|227357422|ref|ZP_03841776.1| formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Proteus mirabilis ATCC 29906] gi|194683855|emb|CAR44986.1| hydrogenase-4 component H [Proteus mirabilis HI4320] gi|227162380|gb|EEI47380.1| formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Proteus mirabilis ATCC 29906] Length = 184 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 26/100 (26%), Gaps = 22/100 (22%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I+ T L + +C++C C+++CP+ + L Sbjct: 9 IKTGDATTKYPFKPLELPDGFRGKPEYSPEQCIVCGACTSACPANALTMETNLETGERHW 68 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + RC C + CP Sbjct: 69 QLF----------------------IGRCIYCGRCEEVCP 86 >gi|160890949|ref|ZP_02071952.1| hypothetical protein BACUNI_03394 [Bacteroides uniformis ATCC 8492] gi|317481478|ref|ZP_07940544.1| glutamate synthase [Bacteroides sp. 4_1_36] gi|156859170|gb|EDO52601.1| hypothetical protein BACUNI_03394 [Bacteroides uniformis ATCC 8492] gi|316902388|gb|EFV24276.1| glutamate synthase [Bacteroides sp. 4_1_36] Length = 768 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 58/202 (28%), Gaps = 23/202 (11%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + I G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITIGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E E +K Sbjct: 244 ---GHQVDFDEMLKRMGAFKSIEREEMHKLEEPQTCQATHENVQEADEKSRNAAWRQELR 300 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 + +R P + + + SR E + L + RC N Sbjct: 301 KSMKA-------KERTAIPRVEMNELDAEYRSHSRKEEVNQGLTEEQALTEAKRCLDCAN 353 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 CT+ CP G++ + I I+ Sbjct: 354 PGCTEGCPVGIDIPRFIKNIER 375 >gi|123442365|ref|YP_001006344.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089326|emb|CAL12174.1| putative pyruvate-flavodoxin oxidoreductase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1177 Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 11/95 (11%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGPAILLQAYRWLID 205 + ++ + I C C C +CP + D G + Sbjct: 670 TQWEKRNIAEDIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPDAMSG--APDSLQSLEVK 727 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +RD + + + C C + CP Sbjct: 728 ARDMRGQKYVLQVAPED----CTGCNLCYEVCPAK 758 >gi|328884210|emb|CCA57449.1| Fe-S lactate dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 959 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 11/87 (12%) Query: 165 DGLYECVMCACCSTS---------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 CV A C + CPSY + + + G R Sbjct: 547 REAARCVGVAKCRVAGPSSGPGVMCPSYRATGEEKHSTRGRARLLHEMALGEVVTDGWRS 606 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + L C + C CP G++ Sbjct: 607 EEVR--EALDLCLSCKGCRSDCPVGVD 631 >gi|256828086|ref|YP_003156814.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfomicrobium baculatum DSM 4028] gi|256577262|gb|ACU88398.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfomicrobium baculatum DSM 4028] Length = 543 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 45/179 (25%), Gaps = 28/179 (15%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL----- 154 K + V P S Y W E Sbjct: 15 DYTPPKADWMDVPVEIKPGRYCYA--ANPDSVNYVGLPHARKWNPLDDDWKLPENWQEII 72 Query: 155 -----LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL------ 203 + + R + CV C C+ C + + D P + + R + Sbjct: 73 FNGLRERLQKFRSFKIFMDICVRCGACADKCHFFIGSGDPKNMPVLRAELLRSVYRGEFT 132 Query: 204 --------IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E L + ++C C+ CP G++ A+ + +L Sbjct: 133 TFGKILGRFAGGRKLTPEVLKEW--WYYFFQCSECRRCSVFCPYGIDTAEVTIIGRELL 189 >gi|209964542|ref|YP_002297457.1| NADH dehydrogenase subunit I [Rhodospirillum centenum SW] gi|226737410|sp|B6ISX3|NUOI_RHOCS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|209958008|gb|ACI98644.1| NADH-quinone oxidoreductase chain I [Rhodospirillum centenum SW] Length = 162 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L + S+ + +I + H R+ +G C+ C C Sbjct: 15 ELVRGLSLTFSYMFRPRATINY--PYERSPMSPRFRGEHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 73 CPALAITIEAEPREDGSRRTTRYDIDMT------------------KCIYCGLCQEACPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|220923877|ref|YP_002499179.1| ferredoxin III, nif-specific [Methylobacterium nodulans ORS 2060] gi|219948484|gb|ACL58876.1| ferredoxin III, nif-specific [Methylobacterium nodulans ORS 2060] Length = 179 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 27/97 (27%), Gaps = 5/97 (5%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 D C+ C C C + L + D D+F GE Sbjct: 84 RAWIPDFLVAIDETTCIGCGRCYKVCS--RDVMHLFGVGDGNLLLGKIEEDEDDDFDGEL 141 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLN---PAKAIA 248 + + C C + CPK PA IA Sbjct: 142 VRKVMVVDNAGACIGCGACARVCPKNCQTHVPADRIA 178 >gi|186476756|ref|YP_001858226.1| NADH dehydrogenase subunit I [Burkholderia phymatum STM815] gi|184193215|gb|ACC71180.1| NADH-quinone oxidoreductase, chain I [Burkholderia phymatum STM815] Length = 162 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R I + H R+ +G C+ C C CP+ + Sbjct: 26 YTFQRKITVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|332674069|gb|AEE70886.1| NADH-ubiquinone oxidoreductase [Helicobacter pylori 83] Length = 844 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGQSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 K L+ + + P V K + LQ Sbjct: 73 --------NTKTLMGERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|330889020|gb|EGH21681.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 470 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP Y L+ +Y D R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLIISY----DPNRGETRGPRKKEADPQALGLGDCIDCTMC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|315587157|gb|ADU41538.1| NADH-ubiquinone oxidoreductase subunit G [Helicobacter pylori 35A] Length = 844 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCREGI-CGSCGMNIDGTNTLACVKDMKDIKGAIA 112 G VL+ PT+ C + C C + +DG +C K+ + Sbjct: 14 QEGKSVLEAA-RSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNAVILT 72 Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED------------ 160 IK L+ + + P V K + LQ Sbjct: 73 --------NIKTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVA 124 Query: 161 ---------RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + + C+MC C T+C ++ L+A + + + D+F+ Sbjct: 125 DDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENN--------LKATKADLHAPDKFK 176 Query: 212 GERLDNLEDPFRLYR--------------CHTIMNCTQSCPKG 240 +D F ++ C+ C CP G Sbjct: 177 D---SMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVG 216 >gi|284050506|ref|ZP_06380716.1| bidirectional hydrogenase complex protein HoxU [Arthrospira platensis str. Paraca] Length = 238 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 21/76 (27%) Query: 169 ECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-L 224 C++C C C + GPA + + L P+ + Sbjct: 147 RCILCTRCQRVCDEIEGAHVWDVAFRGPAAKM-----------------ITGLNQPWGAV 189 Query: 225 YRCHTIMNCTQSCPKG 240 C + C +CP G Sbjct: 190 DACTSCGKCVDACPTG 205 >gi|254294037|ref|YP_003060060.1| cytochrome C oxidase accessory protein CcoG [Hirschia baltica ATCC 49814] gi|254042568|gb|ACT59363.1| cytochrome c oxidase accessory protein CcoG [Hirschia baltica ATCC 49814] Length = 479 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 5/79 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C+ CP + A+ + YRW R E +G N Sbjct: 208 YALAGTMREQVCTYLCPWPRIQAALTDEHALNVT-YRWD---RGEPRGAHKKN-TSWDGR 262 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C +CP G++ Sbjct: 263 GDCIDCNACVVACPVGIDI 281 >gi|288573269|ref|ZP_06391626.1| aldo/keto reductase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569010|gb|EFC90567.1| aldo/keto reductase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 378 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 6/134 (4%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P +SV+ + M + E + + + C C C Sbjct: 243 PEVSVVLSGMSSMEQVEDNLEAAEQGYPGNLTETERTAVDKAARIYMDRMAVNCTGCRYC 302 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP+ + + + ++D + +D + +C C + Sbjct: 303 MP-CPAGVKIPECFAQYNKVT-----MLDDLAGAKQFYGVLTKDGGKASQCVECGKCETA 356 Query: 237 CPKGLNPAKAIAKI 250 CP+ + KA+ ++ Sbjct: 357 CPQNIPIRKALKEV 370 >gi|209518507|ref|ZP_03267328.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. H160] gi|209501052|gb|EEA01087.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. H160] Length = 162 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + Sbjct: 26 YAFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|57235003|ref|YP_180897.1| [Fe] hydrogenase, large subunit HymC, putative [Dehalococcoides ethenogenes 195] gi|57225451|gb|AAW40508.1| [Fe] hydrogenase, large subunit HymC, putative [Dehalococcoides ethenogenes 195] Length = 573 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 43/217 (19%), Gaps = 35/217 (16%) Query: 45 MDTYYVDLDN----CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLAC 100 M T +D G ++ I C C + I+G LA Sbjct: 1 MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT 60 Query: 101 VKDMK--------------DIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 K + L + + R Sbjct: 61 SCSRKVAEGMKVNTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK 120 Query: 147 SPKPAKELLQSHEDRQKIDGLYE---CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 E D + + C+ C C C + A ++ Sbjct: 121 LRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDIQT-----------VNAIGFI 169 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D +D C C CP G Sbjct: 170 NKGPDTMVATSMDR---GMGNVACANCGQCILVCPVG 203 >gi|3929358|sp|O24143|NDUS8_TOBAC RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=Complex I-28.5kD; Short=CI-28.5kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|1666177|emb|CAA70326.1| NADH dehydrogenase [Nicotiana tabacum] Length = 230 Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 20/131 (15%) Query: 110 AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 + L +++ L++ + +F+ + +I + + R+ G Sbjct: 73 EQQINTLFLTEMVRGLMLTLKYFFEKKVTINYPFEKG--PLSPRFRGEQPLRRYPTGEER 130 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C CP+ + + R+ ID +C Sbjct: 131 CIACKLCEAICPAQAITIEAEAREDGSRRTTRYDIDMT------------------KCIY 172 Query: 230 IMNCTQSCPKG 240 C ++CP Sbjct: 173 CGFCQEACPVD 183 >gi|253584361|ref|ZP_04861559.1| glutamate synthase [Fusobacterium varium ATCC 27725] gi|251834933|gb|EES63496.1| glutamate synthase [Fusobacterium varium ATCC 27725] Length = 755 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 13/83 (15%) Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER-----LDNLEDPFRLYRCHTIM 231 + +CP++ D+ + D R++ E L+ + RC Sbjct: 286 NPACPNHEIIVDK----KKRVPVREQEPDVRNKNFEEVCYGYNLEEAQAEAA--RCLNCK 339 Query: 232 N--CTQSCPKGLNPAKAIAKIKM 252 N C Q CP ++ I KIK Sbjct: 340 NPLCVQGCPVSIDIPAFIQKIKE 362 >gi|160887227|ref|ZP_02068230.1| hypothetical protein BACOVA_05244 [Bacteroides ovatus ATCC 8483] gi|156107638|gb|EDO09383.1| hypothetical protein BACOVA_05244 [Bacteroides ovatus ATCC 8483] Length = 266 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 5/82 (6%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 ++ + +C+ C C +CP + + + + +W+ Sbjct: 148 YWMEEMSKCIKCYACRAACPLCYCSRC-----IVEVNCPQWVQPWSAPLTNMEWQINRVM 202 Query: 222 FRLYRCHTIMNCTQSCPKGLNP 243 RC C Q+CP G+ Sbjct: 203 HMAGRCIGCGACKQACPVGIPL 224 >gi|466366|gb|AAA87057.1| potential NAD-reducing hydrogenase subunit [Desulfovibrio fructosovorans] Length = 585 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 49/178 (27%), Gaps = 34/178 (19%) Query: 81 REGICGSCGMNIDGTNTLACVKD----MKDIKGAIAVYPLPHMSVI---------KDLVV 127 + C C + ++G LA + ++ L + KD +V Sbjct: 48 KAASCRVCVVEVEGRRNLAPSCATPVTDNMVVKTNSLRVLNARRTVLELLLSDHPKDCLV 107 Query: 128 D-MSHFYSQHRSIEPWLKTVSPKPAKELLQSHED--RQKIDGLYECVMCACCSTSCPSYW 184 S E + SP E+ +D I + +C+MC C T C + Sbjct: 108 CAKSGECELQTLAERFGIRESPYDGGEMSHYRKDISASIIRDMDKCIMCRRCETMCNTVQ 167 Query: 185 WNS--DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + A + ++ D C C CP G Sbjct: 168 TCGVLSGVNRGFTAVVAPAFEMNLADTV----------------CTNCGQCVAVCPTG 209 >gi|329957594|ref|ZP_08298069.1| 4Fe-4S binding domain protein [Bacteroides clarus YIT 12056] gi|328522471|gb|EGF49580.1| 4Fe-4S binding domain protein [Bacteroides clarus YIT 12056] Length = 167 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + K ++ + + C+ C C +CP+ Sbjct: 22 MKTTMTVFCRKKTTEQYPENRKTLKLSERFRGTLTMPHNERNEHHCIACGLCQMACPN-- 79 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ +++ D + + L + L C C +CP Sbjct: 80 ----------DTIKVTSETVETEDGKKKKILAKY--EYDLGSCIFCQLCVNACP 121 >gi|307718918|ref|YP_003874450.1| hypothetical protein STHERM_c12360 [Spirochaeta thermophila DSM 6192] gi|306532643|gb|ADN02177.1| hypothetical protein STHERM_c12360 [Spirochaeta thermophila DSM 6192] Length = 574 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 35/103 (33%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R +C C C CP + E ++ L Sbjct: 4 QRLIYTVTSDCFDCYKCIRECPVKAIRIS--------------------GGRAEVVEEL- 42 Query: 220 DPFRLYRCHTIMNCTQSCP-------KGLNPAKAIAKIKMMLL 255 C +C + CP G++ AK I ++ ++ Sbjct: 43 -------CLYCGHCVEVCPSGAKRVRSGVDRAKTILSLRSKVV 78 >gi|291446795|ref|ZP_06586185.1| oxidoreductase [Streptomyces roseosporus NRRL 15998] gi|291349742|gb|EFE76646.1| oxidoreductase [Streptomyces roseosporus NRRL 15998] Length = 699 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + ++ ++ G R + Sbjct: 280 RRCVGVAKCRTTEASGAGVMCPSFRATGEEAHSTRGRIRLLHEMLAGEVITDGWRSTEVR 339 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 340 DA--LDLCLSCKGCRSDCPVGVD 360 >gi|323529322|ref|YP_004231474.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] gi|323386324|gb|ADX58414.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] Length = 998 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 158 HEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E + C+ C + CPS+ + + ++ E Sbjct: 565 PEGDGMQRAVERCIGMGKCRSLDGGTMCPSFRATREEKFSTRGRAHLFWEMLQG--EVIK 622 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + +++E L C C CP Sbjct: 623 DGWNSVEVKEALDACLACKGCKSDCPTH 650 >gi|239989779|ref|ZP_04710443.1| putative oxidoreductase [Streptomyces roseosporus NRRL 11379] Length = 614 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + ++ ++ G R + Sbjct: 195 RRCVGVAKCRTTEASGAGVMCPSFRATGEEAHSTRGRIRLLHEMLAGEVITDGWRSTEVR 254 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 255 DA--LDLCLSCKGCRSDCPVGVD 275 >gi|239943323|ref|ZP_04695260.1| putative oxidoreductase [Streptomyces roseosporus NRRL 15998] Length = 707 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + ++ ++ G R + Sbjct: 288 RRCVGVAKCRTTEASGAGVMCPSFRATGEEAHSTRGRIRLLHEMLAGEVITDGWRSTEVR 347 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 348 DA--LDLCLSCKGCRSDCPVGVD 368 >gi|224077832|ref|XP_002305427.1| predicted protein [Populus trichocarpa] gi|222848391|gb|EEE85938.1| predicted protein [Populus trichocarpa] Length = 222 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 24/123 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L + + +F+ + +I + + H R+ G C+ C C Sbjct: 75 EMVRGLSLTLKYFFEKKVTINYPFEKG--PLSSHFRGEHALRRYHTGEERCIACKLCEAI 132 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 133 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 172 Query: 238 PKG 240 P Sbjct: 173 PVD 175 >gi|189467870|ref|ZP_03016655.1| hypothetical protein BACINT_04262 [Bacteroides intestinalis DSM 17393] gi|189436134|gb|EDV05119.1| hypothetical protein BACINT_04262 [Bacteroides intestinalis DSM 17393] Length = 768 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 60/216 (27%), Gaps = 38/216 (17%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + I G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITIGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + E +K Sbjct: 244 ---GHQVDFDEMLKRMGAFKSIEREEMHKLEEGESCKVMPEPAQEVDEKSRNAAW----- 295 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------EFQGERLDNLEDPFRLY--- 225 + + P R ++ D + E L + L Sbjct: 296 ---------RLELRKAMKPKERTAIPRVEMNELDPEYRSHSRKEEVNQGLTEEQALTEAK 346 Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKI-KMMLLDRK 258 RC N C + CP G++ + I I + +L+ Sbjct: 347 RCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAA 382 >gi|170749312|ref|YP_001755572.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] gi|170655834|gb|ACB24889.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] Length = 995 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 8/98 (8%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY + + R I + + + E Sbjct: 567 EMCNNNGTCRKLAGGAMCPSYRATGEEQHLTRGRANSLRLAISGQ--LGKDAFTSPEMKR 624 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK-AIAKIKMMLLDRKI 259 L C + C + CP G++ AK I + + Sbjct: 625 TLDLCVSCKACRRECPTGVDMAKMKIEFLHHYHARHGL 662 >gi|148262234|ref|YP_001228940.1| heterodisulfide reductase subunit C-like protein [Geobacter uraniireducens Rf4] gi|146395734|gb|ABQ24367.1| Heterodisulfide reductase subunit C-like protein [Geobacter uraniireducens Rf4] Length = 192 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 13/86 (15%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C C C+ CP + + R L + + + ++ C Sbjct: 30 RRCFQCGKCTAGCPMRSFME------HPPNRIMRLLQLGQ-------WERILAGRSIWYC 76 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMM 253 + C+ CP ++ A + ++ + Sbjct: 77 ASCETCSTRCPNKVDLAAIMDALRKL 102 >gi|238784033|ref|ZP_04628048.1| Hydrogenase-4 component H [Yersinia bercovieri ATCC 43970] gi|238715010|gb|EEQ07007.1| Hydrogenase-4 component H [Yersinia bercovieri ATCC 43970] Length = 208 Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + + Sbjct: 33 PQYEAAQCIACGACTMACPANALTMETDIARGTRQWQLF--------------------- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|315654705|ref|ZP_07907611.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii ATCC 51333] gi|315491169|gb|EFU80788.1| NADH-quinone oxidoreductase subunit I [Mobiluncus curtisii ATCC 51333] Length = 245 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +F+ + + + + V +P + DGL +CV C C+ +CP+ Sbjct: 57 FGVTFRNFFRPYVTEQYPFEKVPTQPRYHGRHQL--NRYPDGLEKCVGCELCAWACPA-- 112 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A ++ GER + + L RC C ++CP Sbjct: 113 --DAIYVEAAANTPEAQY-------SAGERYGRVYEINYL-RCIFCGMCIEACP 156 >gi|268323917|emb|CBH37505.1| putative Fe-only hydrogenase [uncultured archaeon] Length = 569 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 18/74 (24%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-- 226 +C++C C C + ++ D LD L Sbjct: 145 KCILCGRCIRVCHDVQT-----------VSVIGFVNRGPDTMVATVLD-----EGLGNVE 188 Query: 227 CHTIMNCTQSCPKG 240 C C +CP G Sbjct: 189 CTNCGQCIHACPVG 202 >gi|170077052|ref|YP_001733690.1| aldo/keto reductase family oxidoreductase [Synechococcus sp. PCC 7002] gi|169884721|gb|ACA98434.1| oxidoreductase aldo/keto reductase family [Synechococcus sp. PCC 7002] Length = 374 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 13/117 (11%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + ++P+ + L + + + EC C C CP + + A + Sbjct: 254 QPLTPQEQQRLTNLSQHQHQRLQGTECHQCYACLP-CPEAIAIPE---ILRLRNLAIAYD 309 Query: 204 IDSRDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + S E+ R LE+ + C +C CP L + + + L Sbjct: 310 MQSYGEY---RYQMLENAGHWFPGKKGNACTECGDCLPRCPSQLPIPQLLQEAHQRL 363 >gi|94269001|ref|ZP_01291345.1| heterodisulfide reductase [delta proteobacterium MLMS-1] gi|93451381|gb|EAT02239.1| heterodisulfide reductase [delta proteobacterium MLMS-1] Length = 549 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + +R + G+ L + Sbjct: 97 RSLKIFMDCCVRCGACADKCHFFLGTGDPKNMPVLRAELFRSVYRHDFTLAGKILGEMAG 156 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C C+ CP G++ A+ + +L Sbjct: 157 ARPMTFKVLKEWFMYFYQCTECRRCSVFCPYGIDTAEVTIMGRELL 202 >gi|94272063|ref|ZP_01292061.1| heterodisulfide reductase [delta proteobacterium MLMS-1] gi|93450249|gb|EAT01524.1| heterodisulfide reductase [delta proteobacterium MLMS-1] Length = 505 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R + CV C C+ C + D P + + +R + G+ L + Sbjct: 53 RSLKIFMDCCVRCGACADKCHFFLGTGDPKNMPVLRAELFRSVYRHDFTLAGKILGEMAG 112 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 Y+C C+ CP G++ A+ + +L Sbjct: 113 ARPMTFKVLKEWFMYFYQCTECRRCSVFCPYGIDTAEVTIMGRELL 158 >gi|53804900|ref|YP_113272.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Methylococcus capsulatus str. Bath] gi|53758661|gb|AAU92952.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Methylococcus capsulatus str. Bath] Length = 1188 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 25/88 (28%), Gaps = 3/88 (3%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ- 211 ++ D + C+ C CS CP + Y + + + Sbjct: 672 WEKRNIADTVPVWEPDICIQCGNCSFVCPHSVIRAKFYPESRLAGAPAGFKSAPINARGF 731 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPK 239 E L+ + C C + CP Sbjct: 732 PETRYTLQVY--VEDCTGCGLCAEVCPV 757 >gi|89900294|ref|YP_522765.1| NADH dehydrogenase subunit I [Rhodoferax ferrireducens T118] gi|115502541|sp|Q21YB9|NUOI_RHOFD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|89345031|gb|ABD69234.1| NADH-quinone oxidoreductase, chain I [Rhodoferax ferrireducens T118] Length = 177 Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ I + H R+ +G C+ C C CP+ + + Sbjct: 41 YAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAITIESEVR 100 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 101 ADGSRRTTRYDID------------------LNKCIFCGFCEESCPVD 130 >gi|170693701|ref|ZP_02884859.1| formate dehydrogenase, alpha subunit [Burkholderia graminis C4D1M] gi|170141483|gb|EDT09653.1| formate dehydrogenase, alpha subunit [Burkholderia graminis C4D1M] Length = 992 Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR R D Sbjct: 198 YFTYDPAKCIVCNRCVRAC-------EETQGTFALTIAGR-GFESRVAASENR--PFMDS 247 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 248 E----CVSCGACVAACP 260 >gi|163797835|ref|ZP_02191780.1| putative glycolate oxidase [alpha proteobacterium BAL199] gi|159176879|gb|EDP61446.1| putative glycolate oxidase [alpha proteobacterium BAL199] Length = 976 Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 11/124 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYL 191 RS+ + P + C C CPS+ D Sbjct: 534 RSLFRYPPDYKPVNPATRFDWSAWGGLSGAVEMCNNNGTCRKRDPGVMCPSFRATGDEEH 593 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 R + + E L + L C C + CP G++ +AK+K Sbjct: 594 VTRGRANTLRLALSGQ--LGPEGLTDPAMKSALDLCVGCKGCRRECPTGVD----MAKMK 647 Query: 252 MMLL 255 +L Sbjct: 648 TEVL 651 >gi|46202771|ref|ZP_00052647.2| COG0247: Fe-S oxidoreductase [Magnetospirillum magnetotacticum MS-1] Length = 405 Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 13/123 (10%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--- 202 + R + CV C C+ C + D P +R Sbjct: 54 EKRAVEHMGSLVSKYRSLQVYMDICVKCGACTDKCHYFLGTHDPKNMPVARADLFRSVYR 113 Query: 203 --------LIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + D L++ F + C C+ CP G++ A+ I+ Sbjct: 114 RYFTPAGKMAPGLVGARDMTKDVLDEWFNYFHQCSQCRRCSVFCPYGIDTAE-ISMAARD 172 Query: 254 LLD 256 ++D Sbjct: 173 IMD 175 >gi|298530414|ref|ZP_07017816.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509788|gb|EFI33692.1| protein of unknown function DUF224 cysteine-rich region domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 441 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Query: 170 CVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C CA C+ +C Y ++ + + PA ++ ++ + E + L + + C+ Sbjct: 29 CANCALCADTCHFYLADNRNPEMIPAYKVRFINEILKGKAEINDDYLQKMYSTL-FHECN 87 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 C CP G++ +A + ML Sbjct: 88 MCRRCALYCPFGIDVGIMVALQRAML 113 >gi|294637339|ref|ZP_06715635.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Edwardsiella tarda ATCC 23685] gi|291089496|gb|EFE22057.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Edwardsiella tarda ATCC 23685] Length = 964 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 38/151 (25%), Gaps = 9/151 (5%) Query: 95 TNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS----PKP 150 N A +D + + LP + V + + I L Sbjct: 617 ENLHAVTPPPRDTQAEEQGWQLPASAPRFVREVTAAMLLDRGERIPVSLIPADGTYPTGT 676 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRD 208 + ++ I C+ C C+ CP + +R S Sbjct: 677 TRFEKRNIALEIPIWRPELCIQCGNCAFVCPHAAIRAKFYHQDRLTGAPDDFRSAPISAR 736 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 F R P C C ++CP Sbjct: 737 GFPETRYTLQVYPE---DCTGCGLCVEACPV 764 >gi|258513460|ref|YP_003189682.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfotomaculum acetoxidans DSM 771] gi|257777165|gb|ACV61059.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Desulfotomaculum acetoxidans DSM 771] Length = 1174 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 7/84 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C CS CP ++ +G+ L+ L Sbjct: 680 MVPEWQPDNCIQCNQCSFVCPHAAIRPFLLNSEEAAKAPATFI---TKAAKGKGLEELGL 736 Query: 221 PFRLY----RCHTIMNCTQSCPKG 240 +R+ C NC ++CP Sbjct: 737 QYRMQVSTLDCTGCGNCVETCPAK 760 >gi|225707568|gb|ACO09630.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Osmerus mordax] Length = 210 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + MS+ + + +I + + H R+ G C+ C Sbjct: 59 LLWTELFRGLGMTMSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 116 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 117 CEAICPAQAITIEAETRADGSRRTTRYDIDMT------------------KCIYCGFCQE 158 Query: 236 SCPKG 240 +CP Sbjct: 159 ACPVD 163 >gi|160943823|ref|ZP_02091054.1| hypothetical protein FAEPRAM212_01321 [Faecalibacterium prausnitzii M21/2] gi|158444997|gb|EDP22000.1| hypothetical protein FAEPRAM212_01321 [Faecalibacterium prausnitzii M21/2] Length = 444 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + + C+ C C CP L P + QAY +RD + +L Sbjct: 357 KAAAQPAQVNPCIRCGRCVEYCPM-------GLEPVEVNQAYA----ARDVQELGKLHA- 404 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAK 245 C +C+ CP + Sbjct: 405 ------DYCFNCGSCSFVCPAKRPVTQ 425 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP GL P ++ R + Sbjct: 368 CIRCGRCVEYCPMGLEPV----EVNQAYAARDV 396 >gi|222053576|ref|YP_002535938.1| molybdopterin oxidoreductase [Geobacter sp. FRC-32] gi|221562865|gb|ACM18837.1| molybdopterin oxidoreductase [Geobacter sp. FRC-32] Length = 828 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 22/93 (23%), Gaps = 17/93 (18%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +E+ + C+ C C+ C AY ++ Sbjct: 125 TDEKFNHKIDYENPLIERDMNRCIHCGKCARICDEIVSFG-----------AYTFINRGI 173 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + C +C CP G Sbjct: 174 EA------KMGTEFDGPLNCEFCGSCVSVCPVG 200 >gi|158319289|ref|YP_001511796.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139488|gb|ABW17800.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Alkaliphilus oremlandii OhILAs] Length = 1172 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 8/90 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C CS CP +L ++ ++ + G+ D L+ Sbjct: 684 PEWYSDKCIQCNQCSFVCP--HAAIRPFLLDEEEVKNAPEGFNT-VKATGKEFDGLQYKI 740 Query: 223 RLY--RCHTIMNCTQSCPKGLNPAKAIAKI 250 ++ C NC CP KAIA + Sbjct: 741 QVSPLDCTGCGNCVDICPAK---EKAIAMM 767 >gi|94968872|ref|YP_590920.1| NADH-quinone oxidoreductase, chain I [Candidatus Koribacter versatilis Ellin345] gi|156632693|sp|Q1IQK4|NUOI2_ACIBL RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|94550922|gb|ABF40846.1| NADH dehydrogenase subunit I [Candidatus Koribacter versatilis Ellin345] Length = 175 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 17/100 (17%) Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + H ++ +GL +CV C C+ +CPS + ++ Sbjct: 42 FQERFRGMHVLQRDENGLEKCVACFLCAAACPSNCIYIE-----------AAENTETNRV 90 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ER + + RC C ++CP AI Sbjct: 91 SGAERYAKVYNIDY-NRCIFCGYCVEACP-----TDAITH 124 >gi|157821497|ref|NP_001099792.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Rattus norvegicus] gi|149061895|gb|EDM12318.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|149061896|gb|EDM12319.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|149061897|gb|EDM12320.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|165971299|gb|AAI58792.1| Ndufs8 protein [Rattus norvegicus] Length = 212 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 20/127 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L + + L + +S+ + + +I + + H R+ G C+ C Sbjct: 59 RILMWTELFRGLGMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIAC 116 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP+ + + R+ ID +C C Sbjct: 117 KLCEAICPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFC 158 Query: 234 TQSCPKG 240 ++CP Sbjct: 159 QEACPVD 165 >gi|83630912|gb|ABC26909.1| HoxU [Arthrospira platensis FACHB341] gi|291570289|dbj|BAI92561.1| diaphorase subunit of the bidirectional hydrogenase [Arthrospira platensis NIES-39] Length = 243 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 21/76 (27%) Query: 169 ECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-L 224 C++C C C + GPA + + L P+ + Sbjct: 152 RCILCTRCQRVCDEIEGAHVWDVAFRGPAAKM-----------------ITGLNQPWGAV 194 Query: 225 YRCHTIMNCTQSCPKG 240 C + C +CP G Sbjct: 195 DACTSCGKCVDACPTG 210 >gi|15678927|ref|NP_276044.1| hypothetical protein MTH907 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622003|gb|AAB85405.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 280 Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 8/128 (6%) Query: 128 DMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 MS +I+ + +L+ + ++ C C C CP Sbjct: 159 GMSSISEVKENIKIASSPEELTEDDHAILREVKRAYRMRKTVPCSECGYCMP-CP---EG 214 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 D +L YR++ +R R + + R C +C CP+ ++ Sbjct: 215 VDIPRNLRLLNDIYRFMS-TRGVRTEYR-KIMGEAERASNCSGCGSCMP-CPQMIDIPSE 271 Query: 247 IAKIKMML 254 + ++ L Sbjct: 272 LRRLHEKL 279 >gi|317182471|dbj|BAJ60255.1| D-lactate dehydrogenase [Helicobacter pylori F57] Length = 946 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYR-------WLIDSRDEFQGERLDNLEDPFRLYR--CHTIM 231 PS D L P + +R + E Q + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREVERLKERVSQGHHEDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 >gi|315925725|ref|ZP_07921933.1| propanediol utilization protein PduS [Pseudoramibacter alactolyticus ATCC 23263] gi|315620968|gb|EFV00941.1| propanediol utilization protein PduS [Pseudoramibacter alactolyticus ATCC 23263] Length = 439 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 29/93 (31%), Gaps = 11/93 (11%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 C+ C+ CS CP D + + + AY D + P + Sbjct: 248 ATACMQCSLCSEVCPRNMLGHDLWPHKMMRIAAYAGTCDP-----------VAAPTNAFL 296 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +C L P K +K L I Sbjct: 297 CCECGLCEYACVHDLQPWKVNQYLKGELSKAGI 329 >gi|317061328|ref|ZP_07925813.1| glutamate synthase [Fusobacterium sp. D12] gi|313687004|gb|EFS23839.1| glutamate synthase [Fusobacterium sp. D12] Length = 761 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIKM 252 RC N C Q+CP +N I KI+ Sbjct: 340 RCLQCKNPLCVQACPVSINIPAFIQKIRE 368 >gi|258647048|ref|ZP_05734517.1| NADH-ubiquinone oxidoreductase, NQO9 subunit [Prevotella tannerae ATCC 51259] gi|260853163|gb|EEX73032.1| NADH-ubiquinone oxidoreductase, NQO9 subunit [Prevotella tannerae ATCC 51259] Length = 194 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L M +++ + + S + ++CV C C +CP+ Sbjct: 21 LRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKCVGCGLCMMACPNN- 79 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + ++ + D + ++L L + L C M C ++CP Sbjct: 80 -----------SINVVTEMVATPDGKKKKQL--LRHEYNLGSCMFCMLCVRACP 120 >gi|256830113|ref|YP_003158841.1| response regulator receiver protein [Desulfomicrobium baculatum DSM 4028] gi|256579289|gb|ACU90425.1| response regulator receiver protein [Desulfomicrobium baculatum DSM 4028] Length = 1143 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 16/170 (9%) Query: 77 RRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA------IAVYPLPHMSVIKDLVVDMS 130 R + + G ID + + D + + PL + Sbjct: 18 RAALDLAVTGHKVALIDKRPSHGGILSQLDYQFPSDHCGMCRMLPLMSRDASSQFCLRKG 77 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 F+ + + S R + ++CV C CS CP + Sbjct: 78 MFHENIDLMLSTELASLEGEPGKFFVSLSRRSPLVDPHKCVSCGKCSEVCPVK--VPSEF 135 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++ +L LD L C C ++CP G Sbjct: 136 -NAGLTQRSAVYLPVPHAIPNHYVLD-------LDNCIRCWKCHEACPTG 177 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 3/29 (10%) Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 R L DP + C + C++ CP + Sbjct: 107 RRSPLVDPHK---CVSCGKCSEVCPVKVP 132 >gi|220908067|ref|YP_002483378.1| 4Fe-4S ferredoxin, iron-sulfur-binding [Cyanothece sp. PCC 7425] gi|219864678|gb|ACL45017.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cyanothece sp. PCC 7425] Length = 391 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 23/136 (16%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + + + L + E + D C+ CA C+ CP+ + ++ Sbjct: 239 GQMGRSMNTDGIKELLYNNLEHPRWNDVASRCLTCANCTLVCPTCFCSTVEDTTDLQGDH 298 Query: 199 AYRW------------LIDS----RDEFQGE-------RLDNLEDPFRLYRCHTIMNCTQ 235 A RW + R + +L D F C C Sbjct: 299 AERWRRWDSCFTMDFSYLHGGGSVRPSNRSRYRQWMTHKLATWIDQFGTSGCVGCGRCIT 358 Query: 236 SCPKGLNPAKAIAKIK 251 CP ++ + + I+ Sbjct: 359 WCPVAIDITEEVRAIR 374 >gi|167622747|ref|YP_001673041.1| formate dehydrogenase subunit alpha [Shewanella halifaxensis HAW-EB4] gi|167352769|gb|ABZ75382.1| formate dehydrogenase, alpha subunit [Shewanella halifaxensis HAW-EB4] Length = 1441 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 31/112 (27%), Gaps = 13/112 (11%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP------SYWWNSDRYL 191 + + A+ C+ C C +C + + D Y Sbjct: 619 EYKVKASELDISQAQHFSIDSSAPFITFDANRCISCGACVETCKGASGHNAISFAKDHYQ 678 Query: 192 GPAILLQAYRWLIDSRDEFQGERL---DNLEDPFRLYRCHTIMNCTQSCPKG 240 I + DE + R+ ++ D C NC Q CP G Sbjct: 679 AIPISCASSCDSSYDSDERKAPRVGFSASMNDSD----CVQCGNCVQVCPTG 726 >gi|15644177|ref|NP_229226.1| Fe-hydrogenase, subunit alpha [Thermotoga maritima MSB8] gi|4981990|gb|AAD36496.1|AE001794_12 Fe-hydrogenase, subunit alpha [Thermotoga maritima MSB8] gi|2865517|gb|AAC02686.1| Fe-hydrogenase alpha subunit [Thermotoga maritima MSB8] Length = 645 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 64/231 (27%), Gaps = 30/231 (12%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCR-EGICGSCGMNIDGT----NTL 98 +D V +++ +L+ L + +I P L G C C + I+G TL Sbjct: 4 YVDGREVIINDNERNLLEALKNVGIEI-PNLCYLSEASIYGACRMCLVEINGQITTSCTL 62 Query: 99 ACVKDMKDIKGAIAVYPLPH-------MSVIKDLVVD-MSHFYSQHRSIEPWLKTVSP-K 149 + MK +Y + + +D + + E + + Sbjct: 63 KPYEGMKVKTNTPEIYEMRRNILELILATHNRDCTTCDRNGSCKLQKYAEDFGIRKIRFE 122 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 K+ E + +C++C C C D+ Sbjct: 123 ALKKEHVRDESAPVVRDTSKCILCGDCVRVCEEIQGVGVIEFAKRGFESVVTTAFDTPLI 182 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPAKAIAKIKMMLLDRKI 259 C C CP G L+ I K+ L KI Sbjct: 183 ETE--------------CVLCGQCVAYCPTGALSIRNDIDKLIEALESDKI 219 >gi|14324334|dbj|BAB59262.1| ferredoxin [Thermoplasma volcanium GSS1] Length = 145 Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 34/126 (26%), Gaps = 14/126 (11%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 YP+ D V +P+ + + C+ Sbjct: 27 YPITGQHNNHD--VRAEGMQRMDADGKPYPTKLGIHGTHVAVDWDC----------CIAD 74 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP + + G + + S DE+ R D DP R C M C Sbjct: 75 GACMDVCPVNLYEWNLNPGKSGTGNDKKVEKGS-DEWNKYRTDK-CDPVRESDCIFCMAC 132 Query: 234 TQSCPK 239 CP Sbjct: 133 ESVCPV 138 >gi|332284829|ref|YP_004416740.1| hypothetical protein PT7_1576 [Pusillimonas sp. T7-7] gi|330428782|gb|AEC20116.1| hypothetical protein PT7_1576 [Pusillimonas sp. T7-7] Length = 1002 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 7/84 (8%) Query: 167 LYECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C C T CPSY D R + + D L Sbjct: 589 IEMCNNNGHCRKFDAGTMCPSYRVTHDEQHLTRGRANTLRLALSGQMGSDAFTSDELRQT 648 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAK 245 L C + C + CP G++ AK Sbjct: 649 --LDLCVSCKGCKRECPTGVDMAK 670 >gi|311279054|ref|YP_003941285.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Enterobacter cloacae SCF1] gi|308748249|gb|ADO48001.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Enterobacter cloacae SCF1] Length = 451 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 13/112 (11%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 P + E C C C+ CP + L P +L++A + + Sbjct: 243 HPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLI--GHALSPHLLVRAVNF----QH 296 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKIKMMLLDRKI 259 + L + C C CP G++P + +K L + + Sbjct: 297 TATPQMLLSALT------CSECSVCESVACPVGISPMRINRMLKRELRAQNL 342 >gi|307296796|ref|ZP_07576614.1| cytochrome c oxidase accessory protein CcoG [Sphingobium chlorophenolicum L-1] gi|306877709|gb|EFN08935.1| cytochrome c oxidase accessory protein CcoG [Sphingobium chlorophenolicum L-1] Length = 476 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 23/79 (29%), Gaps = 4/79 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + L L+ YR R E +G P Sbjct: 202 FVLGGFMREQVCIYMCP-WPRIQTAMLDEKSLVVTYR---HWRGEKRGSLKKAEAHPGDY 257 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 258 GDCIDCNQCVAVCPTGIDI 276 >gi|255527638|ref|ZP_05394499.1| sulfite reductase, subunit A [Clostridium carboxidivorans P7] gi|296185316|ref|ZP_06853726.1| sulfite reductase, subunit A [Clostridium carboxidivorans P7] gi|255508680|gb|EET85059.1| sulfite reductase, subunit A [Clostridium carboxidivorans P7] gi|296050150|gb|EFG89574.1| sulfite reductase, subunit A [Clostridium carboxidivorans P7] Length = 333 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 24/120 (20%) Query: 163 KIDGLYECVMCACCSTSCPSYW---------------------WNSDRYLGPAILLQAYR 201 + C+ C C+T C + W S + G + + Sbjct: 214 WKEYSQRCIACGRCNTVCGTCACFTMQDIFYKDNEKTGERRRVWASCQVDGFTDMAGGHS 273 Query: 202 WLIDSRDEFQGERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 + D + + + + + D F + C C +CP+ ++ + I K+ + + K Sbjct: 274 FRKDQGERMRFKVMHKVYDFKKRFGYHMCVGCGRCDDACPEYISLSNCINKLNNAMEEVK 333 >gi|148244247|ref|YP_001218941.1| ferredoxin [Candidatus Vesicomyosocius okutanii HA] gi|146326074|dbj|BAF61217.1| ferredoxin [Candidatus Vesicomyosocius okutanii HA] Length = 464 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 5/79 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C CP Y + +L Y + R E +G RL + Sbjct: 204 YVFAGFMREQTCLWICP-YARIQGAMVDEQSILPTYDYY---RGERRG-RLKKGKFVKGF 258 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 259 GDCVDCHQCVAVCPTGVDI 277 >gi|148978308|ref|ZP_01814813.1| FixG-related protein [Vibrionales bacterium SWAT-3] gi|145962467|gb|EDK27745.1| FixG-related protein [Vibrionales bacterium SWAT-3] Length = 472 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 5/90 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 + C CP Y + Y R E +G R + Sbjct: 211 AGCTYANAGWMRSIVCLHMCP-YARFQSAMFDKDTFIVGYDTE---RGESRGPRSRKADP 266 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 267 KALGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|15895497|ref|NP_348846.1| pyruvate:ferredoxin oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|15025228|gb|AAK80186.1|AE007723_4 Pyruvate:ferredoxin oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|325509644|gb|ADZ21280.1| Pyruvate:ferredoxin oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 1171 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 4/80 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C CS CP L A + + + + + L Sbjct: 682 PEWNVDKCIQCNQCSFVCP--HAVIRPALMTAEEAKNAPEGMQYKKAMGVKSDEELNFSI 739 Query: 223 RLY--RCHTIMNCTQSCPKG 240 + C NC + CP Sbjct: 740 VISPLDCTGCGNCAEVCPAK 759 >gi|313681377|ref|YP_004059115.1| cytochrome c oxidase accessory protein ccog [Sulfuricurvum kujiense DSM 16994] gi|313154237|gb|ADR32915.1| cytochrome c oxidase accessory protein CcoG [Sulfuricurvum kujiense DSM 16994] Length = 442 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 44/180 (24%), Gaps = 16/180 (8%) Query: 72 PTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSH 131 P R R+ I G+ + N K M + + + + S Sbjct: 84 PQTIFRTIYRDLIQGTLLDLRNNANK---QKRMDTSPLENKLKIVVGFLLWTLIATTAST 140 Query: 132 FYSQH----RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW--- 184 + + ++ + + I + + + C+ CP Sbjct: 141 NFIWYFVPPEDFFTYMYHPEEHLFIIIFIATTAAFLIYDIVW-MQESFCTYLCPYSRIQT 199 Query: 185 -WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 D + + + + + C T C + CP ++ Sbjct: 200 VLYDDNTKHVVYNHNRGGLIYQNNQKQITDSKQWIGTEE----CTTCEACVKVCPTHIDI 255 >gi|325109600|ref|YP_004270668.1| cytochrome C oxidase accessory protein CcoG [Planctomyces brasiliensis DSM 5305] gi|324969868|gb|ADY60646.1| cytochrome c oxidase accessory protein CcoG [Planctomyces brasiliensis DSM 5305] Length = 460 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L ++ + W+ + + + C +CP Y Sbjct: 164 LAHTFLAYFVGVERLGRWVTQSPIEHPGPFFVMVITTGLMMFDFVFFREQLCLIACP-YG 222 Query: 185 WNSDRYLGPAILLQAY-RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 L L+ AY R + R + + L +E P C C ++CP G++ Sbjct: 223 RFQSVLLDRDSLIVAYDRNRGEPRGKLNKQ-LPVIEKPRG--DCVDCGLCVKTCPTGIDI 279 >gi|299067332|emb|CBJ38529.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Ralstonia solanacearum CMR15] Length = 487 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 16/110 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP-----SYWWNSDRYLGP 193 +E W ++ P +L G + C CP S + D Y+ Sbjct: 194 MEVWTLSLGPWQTFWMLFY---AFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT 250 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 + R ++ L C C Q CP G++ Sbjct: 251 YDTQR-------GEPRGSRSRSEDFAAK-GLGACVDCSICVQVCPTGIDI 292 >gi|229829385|ref|ZP_04455454.1| hypothetical protein GCWU000342_01474 [Shuttleworthia satelles DSM 14600] gi|229792548|gb|EEP28662.1| hypothetical protein GCWU000342_01474 [Shuttleworthia satelles DSM 14600] Length = 364 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 32/123 (26%), Gaps = 8/123 (6%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKI--DGLYECVMCACC--STSCPSYWWNS 187 Q R ++ +E E R+ L C C C CP Sbjct: 237 NMEQMRDNLSFMTDYRHLTEEEKKAIEEVRRIFLDQNLIPCTSCHYCVEENHCPKDILIP 296 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D + Q W +D + L C C + CP+ L + Sbjct: 297 DLFSCLNGKRQFDSWN---QDFYYQTVL-TANGHGSASSCIKCGKCEKVCPQHLPIRDLL 352 Query: 248 AKI 250 + Sbjct: 353 VDV 355 >gi|209525020|ref|ZP_03273564.1| ferredoxin [Arthrospira maxima CS-328] gi|209494429|gb|EDZ94740.1| ferredoxin [Arthrospira maxima CS-328] Length = 238 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 21/76 (27%) Query: 169 ECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-L 224 C++C C C + GPA + + L P+ + Sbjct: 147 RCILCTRCQRVCDEIEGAHVWDVAFRGPAAKM-----------------ITGLNQPWGAV 189 Query: 225 YRCHTIMNCTQSCPKG 240 C + C +CP G Sbjct: 190 DACTSCGKCVDACPTG 205 >gi|254431184|ref|ZP_05044887.1| NADH-plastoquinone oxidoreductase, I subunit [Cyanobium sp. PCC 7001] gi|197625637|gb|EDY38196.1| NADH-plastoquinone oxidoreductase, I subunit [Cyanobium sp. PCC 7001] Length = 207 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L V H + +++ + + P +E +C+ C C Sbjct: 19 AQYMTQGLAVTFDHLRRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--TTKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|188528009|ref|YP_001910696.1| D-lactate dehydrogenase [Helicobacter pylori Shi470] gi|188144249|gb|ACD48666.1| D-lactate dehydrogenase [Helicobacter pylori Shi470] Length = 946 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 497 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIHPIEEHLDMCMECGFCERVC 556 Query: 181 PSYWWNSDRYLGPAILLQAYRWLID-----SRDEFQGERL--DNLEDPFRLYR--CHTIM 231 PS D L P + +R + S + + L + L++ L C Sbjct: 557 PS----KDLSLTPRQRIVIHREVERLKERVSHGHHKDQVLLDELLKESEYLAHATCAVCH 612 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP G++ K Sbjct: 613 MCSMLCPLGIDTGKI 627 >gi|113955570|ref|YP_731812.1| NADH dehydrogenase subunit I [Synechococcus sp. CC9311] gi|123327562|sp|Q0I6W0|NDHI_SYNS3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|113882921|gb|ABI47879.1| NADH-plastoquinone oxidoreductase, I subunit [Synechococcus sp. CC9311] Length = 219 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 ++ + L V H + +++ + + P +E +C+ C C Sbjct: 19 ARNLTQGLSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W+++ E + + L N F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WVMNK--ETKKKELRNYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|86751413|ref|YP_487909.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86574441|gb|ABD08998.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 479 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 20/79 (25%), Gaps = 1/79 (1%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + A+ + + R + L Sbjct: 203 YTLAGFMREQVCIYMCPWPRIQAALTDEWALNVTYRVDRGEPRMSVKKAELARQHGE-SA 261 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 262 GDCVDCHQCVNVCPTGVDI 280 >gi|255527529|ref|ZP_05394396.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridium carboxidivorans P7] gi|296187916|ref|ZP_06856308.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium carboxidivorans P7] gi|255508767|gb|EET85140.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridium carboxidivorans P7] gi|296047042|gb|EFG86484.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium carboxidivorans P7] Length = 723 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C C+ CP L + A +++D + L Sbjct: 237 PEWQMDKCIQCNQCAFVCP--HAAIRPILANEAEVAAAPAGFEAKDASGAKGLKFHMAVS 294 Query: 223 RLYRCHTIMNCTQSCPKG 240 L C NC CP Sbjct: 295 PL-DCLGCGNCADICPAK 311 >gi|228932018|ref|ZP_04094910.1| formate dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827601|gb|EEM73343.1| formate dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 978 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|218673284|ref|ZP_03522953.1| ferrodoxin oxidase protein [Rhizobium etli GR56] Length = 309 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNCT 234 C+ CP L L+ Y D R E + + + C C Sbjct: 233 CTYMCPWPRIQG-AMLDENSLVVTY---NDWRGEQRSRHTKKAQAKGLPVGDCVDCNACV 288 Query: 235 QSCPKGLNPAK 245 CP G++ Sbjct: 289 AVCPMGIDIRD 299 >gi|78212152|ref|YP_380931.1| oxidoreductase [Synechococcus sp. CC9605] gi|78196611|gb|ABB34376.1| putative oxidoreductase, aldo/keto reductase family [Synechococcus sp. CC9605] Length = 373 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 13/93 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-- 225 C C C CP + P +L + +EF ER + + + Sbjct: 278 EHCKQCQACIP-CP------NEVPIPELLRLRNLAIGHGLNEFAQERYNLIGRAGHWWEE 330 Query: 226 ----RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C CP L +A L Sbjct: 331 HDASDCERCGACLPRCPHHLPIPDLLADTHQRL 363 >gi|72383362|ref|YP_292717.1| NADH dehydrogenase subunit I [Prochlorococcus marinus str. NATL2A] gi|110287704|sp|Q46HL4|NDHI_PROMT RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|72003212|gb|AAZ59014.1| NADH-plastoquinone oxidoreductase, subunit I:NADH-quinone oxidoreductase, chain I [Prochlorococcus marinus str. NATL2A] Length = 218 Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 24/114 (21%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V H + +++ + + P +E +C+ C C CP Sbjct: 26 LGVTFDHMRRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCVRVCPINL 78 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D W+++ + + R +++ C NC + CP Sbjct: 79 PVVD-------------WVMNKETKKKELRNYSID----FGACIFCGNCVEYCP 115 >gi|291438951|ref|ZP_06578341.1| LOW QUALITY PROTEIN: oxidoreductase [Streptomyces ghanaensis ATCC 14672] gi|291341846|gb|EFE68802.1| LOW QUALITY PROTEIN: oxidoreductase [Streptomyces ghanaensis ATCC 14672] Length = 820 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + + ++ G R + Sbjct: 381 RRCVGVAKCRTASASGPAVMCPSFRATGEEEHSTRGRARLLHEMLAGELVTDGWRSTEVR 440 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 441 DA--LDLCLSCKGCRSDCPVGVD 461 >gi|288819089|ref|YP_003433437.1| NADH dehydrogenase I chain I [Hydrogenobacter thermophilus TK-6] gi|288788489|dbj|BAI70236.1| NADH dehydrogenase I chain I [Hydrogenobacter thermophilus TK-6] gi|308752672|gb|ADO46155.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobacter thermophilus TK-6] Length = 201 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 22/80 (27%), Gaps = 17/80 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G CV C C T+CP P + + D + Sbjct: 78 MSYEKGKSRCVACYMCQTACPM----------PTLFRIEAVQMPDGT-------KKVVRF 120 Query: 221 PFRLYRCHTIMNCTQSCPKG 240 LY C C +CP G Sbjct: 121 DMNLYNCLFCGLCVDACPVG 140 >gi|269838309|ref|YP_003320537.1| FAD linked oxidase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787572|gb|ACZ39715.1| FAD linked oxidase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 983 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 31/111 (27%), Gaps = 6/111 (5%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRYLGPAI 195 + K L + + C C T CPSY D + Sbjct: 536 RYGPDYRTLEPKTHLSFAREGGFAAAIEMCNGAGVCRKVGSGTMCPSYMATRDEHDTTRA 595 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 A R + R + L E L C + C CP ++ AK Sbjct: 596 RANALRAALSGRLLSHSQ-LTAKETYDVLDLCLSCKACKTECPSSVDMAKI 645 >gi|145298168|ref|YP_001141009.1| pyruvate ferrodoxin/flavodoxin oxidoreductase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850940|gb|ABO89261.1| pyruvate ferrodoxin/flavodoxin oxidoreductase [Aeromonas salmonicida subsp. salmonicida A449] Length = 1177 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 23/91 (25%), Gaps = 7/91 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCP---SYWWNSDRYLGPAILLQAYRWLIDSRDE 209 ++ I C C C +CP D+ + +RD Sbjct: 673 WEKRNIAKEVPIWQADLCTRCNYCVAACPHSAIRAKVVDKASLTDAPTTLDALDVKARDM 732 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 733 RGQQYVLQVAPED----CTGCNLCVEVCPAK 759 >gi|90415121|ref|ZP_01223076.1| putative formate dehydrogenase, alpha subunit [Photobacterium profundum 3TCK] gi|90323766|gb|EAS40385.1| putative formate dehydrogenase, alpha subunit [Photobacterium profundum 3TCK] Length = 1385 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 9/95 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLID 205 + + ++ + C+ C C +C + + A A R + Sbjct: 597 TNESCQKFHVDDSSEFIVFDANRCISCGQCVEACNEKAVHGTLSFAKNADGSSASR--PE 654 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R F C C Q CP G Sbjct: 655 CRPGFDK------GYSMGDSNCVQCGACVQVCPTG 683 >gi|328943786|ref|ZP_08241251.1| pyruvate-ferredoxin oxidoreductase [Atopobium vaginae DSM 15829] gi|327491755|gb|EGF23529.1| pyruvate-ferredoxin oxidoreductase [Atopobium vaginae DSM 15829] Length = 1172 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 22/82 (26%), Gaps = 5/82 (6%) Query: 161 RQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C+ C CS CP + + A R + G + Sbjct: 681 MVPHWDETKCIQCNNCSFVCPHSTIRPIAMTEAEAAAAPAQMRMIDAKGKGADGLKFAIA 740 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 P C NC CPK Sbjct: 741 VSPL---DCMGCTNCVYVCPKD 759 >gi|229154293|ref|ZP_04282413.1| formate dehydrogenase [Bacillus cereus ATCC 4342] gi|228629117|gb|EEK85824.1| formate dehydrogenase [Bacillus cereus ATCC 4342] Length = 978 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|187735302|ref|YP_001877414.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425354|gb|ACD04633.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 1192 Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 7/81 (8%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA---YRWLIDSRDEFQGERLDNLE 219 C+ C C+ CP + ++ P L A + L +++GE+ Sbjct: 695 PEWDPTLCIQCGKCTAVCP-HAVIRSKFFSPDALANAPEGFECLDAKHPDWKGEKFVIQI 753 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 P C C CP Sbjct: 754 SPN---DCTGCTLCADVCPAK 771 >gi|310780367|ref|YP_003968699.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ilyobacter polytropus DSM 2926] gi|309749690|gb|ADO84351.1| protein of unknown function DUF224 cysteine-rich region domain protein [Ilyobacter polytropus DSM 2926] Length = 419 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 17/112 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ-AYRWLIDSRDEFQGE 213 L ++ + Q+ + L +C C C CP + + P + + ++L + Sbjct: 5 LVNYMNNQRKNILKKCTQCGLCIKKCPIIKNTKLKNITPQNIQKEVIKFLKEGIPNETV- 63 Query: 214 RLDNLEDPFRLYRCHTIMNCTQS-CPKGLNPAKAIAKI------KMMLLDRK 258 R + C C + CP+GL+P I + + L++ K Sbjct: 64 -------YNRGFSCMECFGCVDACCPQGLDPM-LINDMIKWDYRRNNLIESK 107 >gi|311278312|ref|YP_003940543.1| formate hydrogenlyase complex iron-sulfur subunit [Enterobacter cloacae SCF1] gi|308747507|gb|ADO47259.1| formate hydrogenlyase complex iron-sulfur subunit [Enterobacter cloacae SCF1] Length = 180 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L A A+++ L RC Sbjct: 39 QCIGCAACVNACPSNALTVETDL--AGNALAWQFN--------------------LGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|304438803|ref|ZP_07398730.1| Na(+)-translocating NADH-quinone reductase subunit A [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372726|gb|EFM26305.1| Na(+)-translocating NADH-quinone reductase subunit A [Peptoniphilus duerdenii ATCC BAA-1640] Length = 443 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 20/106 (18%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA-YRWLIDSRDEFQGE 213 L ++ C+ C+ C CP+ + P+ + A R +D+ + Sbjct: 356 LVFTDEDIDTYEESPCIRCSRCIDHCPAR-------INPSGINGAILRGNVDACIGLHAD 408 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 + C C+ CP + ++I K + + + Sbjct: 409 Q------------CMECGICSFVCPAKRHLTQSIKLAKREIRMKSV 442 >gi|294146500|ref|YP_003559166.1| nitrogen fixation protein FixG [Sphingobium japonicum UT26S] gi|292676917|dbj|BAI98434.1| nitrogen fixation protein FixG [Sphingobium japonicum UT26S] Length = 476 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 20/83 (24%), Gaps = 12/83 (14%) Query: 165 DGLYECVMCACCSTSCP----SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 L + C CP ++ L R E +G Sbjct: 202 FVLGGFMREQVCIYMCPWPRIQTAMLDEKSLVVTYKHW--------RGEKRGSLKKAEAR 253 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 P C C CP G++ Sbjct: 254 PGAFGDCIDCNQCVAVCPTGIDI 276 >gi|291544597|emb|CBL17706.1| Predicted oxidoreductases of the aldo/keto reductase family [Ruminococcus sp. 18P13] Length = 371 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 36/126 (28%), Gaps = 7/126 (5%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M +E + + + D C C C CP Sbjct: 246 MSSMEQLQDNMSYMEQFQPMKPEEIDLCMQVR--DIINGTIAVPCTACRYCVEGCPMQIP 303 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTIMNCTQSCPKGLNPA 244 D + L A ++ Q +NL + C C Q CP+ ++ Sbjct: 304 IPDYF----ALYNAELQEVEKPFTVQQTYYENLTRQYGKASDCVACRQCEQHCPQHISIV 359 Query: 245 KAIAKI 250 + + K+ Sbjct: 360 ENLKKV 365 >gi|260576447|ref|ZP_05844437.1| formate dehydrogenase, alpha subunit [Rhodobacter sp. SW2] gi|259021330|gb|EEW24636.1| formate dehydrogenase, alpha subunit [Rhodobacter sp. SW2] Length = 958 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 15/118 (12%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACCSTSC 180 +D+ + ++ ++E K S A L Q+ + +C++C+ C +C Sbjct: 130 QDMAGAVGLRDVRYEAVETHFKPRSNGEANPLFQAKDQSNPYFTYDPAKCIVCSRCVRAC 189 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + I R D F C + C Q+CP Sbjct: 190 EEVQGT-------------FALTIQGRGFDSRVVAGMTGDTFLTSDCVSCGACVQACP 234 >gi|257451992|ref|ZP_05617291.1| putative oxidoreductase [Fusobacterium sp. 3_1_5R] gi|257466207|ref|ZP_05630518.1| putative oxidoreductase [Fusobacterium gonidiaformans ATCC 25563] Length = 461 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIKMMLLDRK 258 RC N C Q+CP ++ I +IK L Sbjct: 39 RCLQCKNPLCVQACPVSIDIPTFIREIKEDNLQAA 73 >gi|257053504|ref|YP_003131337.1| D-lactate dehydrogenase (cytochrome) [Halorhabdus utahensis DSM 12940] gi|256692267|gb|ACV12604.1| D-lactate dehydrogenase (cytochrome) [Halorhabdus utahensis DSM 12940] Length = 1015 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 16/125 (12%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYW 184 + ++ + +L+ + + C C C CP++ Sbjct: 571 HDMTENLRFSPEYDFELGFDPVLEWDNENGMQGMVELCHGCGGCRGPQETTGGVMCPTFR 630 Query: 185 WNSDRYLGPAILLQAYRWLID---SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 + + R + D E + + D C C + CP + Sbjct: 631 ASEEEVTSTRGRANMLRQAMSGDLPADVTDEEFMTEVLD-----LCIGCKGCAKDCPSEV 685 Query: 242 NPAKA 246 + AK Sbjct: 686 DMAKL 690 >gi|146342635|ref|YP_001207683.1| putative glutamate synthase (NADPH) 2-ketoglutarate NADP oxidoreductase subunit gamma (korC-like) [Bradyrhizobium sp. ORS278] gi|146195441|emb|CAL79466.1| putative glutamate synthase (NADPH); putative 2-ketoglutarate: NADP oxidoreductase, gamma subunit (korC-like) [Bradyrhizobium sp. ORS278] Length = 599 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 18/147 (12%) Query: 103 DMKDIKGAIAVYPLPHMSV-IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR 161 + + + P V +D VV + ++ + + D Sbjct: 436 GIHEWSYDNDISPEKRFKVPHRDKVVALKDIRTEVELGYDVKLALGEAHRC----LNCDV 491 Query: 162 QKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLID-----SRDEFQGE 213 Q + C+ C C+ CP + L+A D S D G Sbjct: 492 QTVFSNTLCIECDACADICPMDCITFTENGEEADLRSRLKAPSVHPDQSLYVSSDLKTGR 551 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++D C C + CP G Sbjct: 552 VM--VKDEDV---CLHCGLCAERCPTG 573 >gi|117620985|ref|YP_857665.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562392|gb|ABK39340.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1181 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--ID--SRD 208 ++ I C C C +CP + + + L QA L +D +RD Sbjct: 677 WEKRNIAKEVPIWQADLCTQCNYCVAACP-HSAIRAKVVDKEALEQAPATLDALDVKARD 735 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C C + CP Sbjct: 736 MRGQQYVLQVAPED----CTGCNLCVEVCPAK 763 >gi|332529347|ref|ZP_08405308.1| formate dehydrogenase, alpha subunit [Hylemonella gracilis ATCC 19624] gi|332041145|gb|EGI77510.1| formate dehydrogenase, alpha subunit [Hylemonella gracilis ATCC 19624] Length = 961 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L + R DSR ++P Sbjct: 168 YFNYDASKCIVCNRCVRAC-------EETQGTFALTISGR-GFDSRVSPGQ------DEP 213 Query: 222 FRLYRCHTIMNCTQSCP 238 F C + C ++CP Sbjct: 214 FMASECVSCGACVEACP 230 >gi|325846673|ref|ZP_08169588.1| pyruvate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481431|gb|EGC84472.1| pyruvate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 1176 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 22/98 (22%), Gaps = 13/98 (13%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P K + + C+ C CS CP +L Sbjct: 665 EPGTTKYEKRGIALNVPEWQIDNCIQCNQCSYVCP--HAVIRPFLVTEDEKSNA-----P 717 Query: 207 RDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCP 238 + + D + C NC CP Sbjct: 718 EGFETKKAIGKGMDGYDFRIQISPLDCTGCGNCADVCP 755 >gi|324324630|gb|ADY19890.1| molybdopterin oxidoreductase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 978 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|307579280|gb|ADN63249.1| NADH dehydrogenase subunit I [Xylella fastidiosa subsp. fastidiosa GB514] Length = 158 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 33 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 92 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 93 ID------------------LFKCIFCGFCEESCPVD 111 >gi|302543436|ref|ZP_07295778.1| NADH-quinone oxidoreductase, I subunit [Streptomyces hygroscopicus ATCC 53653] gi|302461054|gb|EFL24147.1| NADH-quinone oxidoreductase, I subunit [Streptomyces himastatinicus ATCC 53653] Length = 221 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 12/95 (12%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 A H+ + DGL +C+ C C+ +CP+ Y+ A + R+ Sbjct: 42 PEEKKPTAPRFHGRHQLNRHPDGLEKCIGCELCAWACPA----DAIYVEGADNTEEERYS 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 GER + L RC C ++CP Sbjct: 98 P-------GERYGRVYQINYL-RCILCGLCVEACP 124 >gi|258652228|ref|YP_003201384.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] gi|258555453|gb|ACV78395.1| D-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] Length = 947 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 29/107 (27%), Gaps = 11/107 (10%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--------SCPSYWWNSDRYLGPAI 195 P PA+ + + CV C CPSY D Sbjct: 519 PRAGPLPARMFALPADRNDLGIAAHRCVGVGKCRADTTATGGVMCPSYLATRDEKDSTRA 578 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + + L E L C + C+ CP G++ Sbjct: 579 RARVLQEAANGGLVAG---LAAPEVLESLDLCLSCKGCSVDCPAGVD 622 >gi|229089652|ref|ZP_04220914.1| formate dehydrogenase [Bacillus cereus Rock3-42] gi|228693682|gb|EEL47383.1| formate dehydrogenase [Bacillus cereus Rock3-42] Length = 978 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|198276155|ref|ZP_03208686.1| hypothetical protein BACPLE_02344 [Bacteroides plebeius DSM 17135] gi|198270967|gb|EDY95237.1| hypothetical protein BACPLE_02344 [Bacteroides plebeius DSM 17135] Length = 149 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 19/122 (15%) Query: 122 IKDLVVDMSHFYS---QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL--YECVMCACC 176 +K L+V M Q + E + + +D + C+ C C Sbjct: 15 VKSLLVGMRTSMKVFCQKKITEQYPENRHTTLHIPERHRAMLVMPVDEEGNHHCIACGLC 74 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 SCP+ ++ + ++ D + + L ++ + L C M C + Sbjct: 75 QMSCPN------------GTIRLTTEMRETEDGKKKKFL--VKYEYNLGSCMFCMLCVNA 120 Query: 237 CP 238 CP Sbjct: 121 CP 122 >gi|217958175|ref|YP_002336719.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH187] gi|217066922|gb|ACJ81172.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH187] Length = 978 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|90407578|ref|ZP_01215759.1| hydrogenase 4 Fe-S subunit [Psychromonas sp. CNPT3] gi|90311281|gb|EAS39385.1| hydrogenase 4 Fe-S subunit [Psychromonas sp. CNPT3] Length = 206 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 24/109 (22%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ--KIDGLYECVMCACCSTSCPSYWWNSDR 189 + ++I + + L+ +D + +C+ CA C+ +CP Sbjct: 1 MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACP-------- 52 Query: 190 YLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 A ++++ E R + RC C + CP Sbjct: 53 ---------ANALIMETDTENNLRRWEI-----SFARCIYCGRCEEVCP 87 >gi|28210852|ref|NP_781796.1| pyruvate-flavodoxin oxidoreductase [Clostridium tetani E88] gi|28203291|gb|AAO35733.1| pyruvate-flavodoxin oxidoreductase [Clostridium tetani E88] Length = 1175 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 22/87 (25%), Gaps = 19/87 (21%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + +C+ C CS CP +L +R E + Sbjct: 680 MVPQWQIEKCIQCNQCSYICP--HAVIRPFLVTE--------EEQNRAPKTFETKKAVGK 729 Query: 221 PFRLYR---------CHTIMNCTQSCP 238 F Y C NC CP Sbjct: 730 GFENYGYRIQVSPLDCTGCGNCADVCP 756 >gi|117924887|ref|YP_865504.1| periplasmic nitrate reductase subunit NapH [Magnetococcus sp. MC-1] gi|117608643|gb|ABK44098.1| periplasmic nitrate reductase subunit NapH [Magnetococcus sp. MC-1] Length = 285 Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 33/136 (24%), Gaps = 33/136 (24%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL-----------QSHEDRQKID 165 P V + L+ + ++ W VSP+ L + R Sbjct: 159 PVSMVQRGLIFGFGFAWMAVAALFLWELLVSPQGWCGRLCPHGALFSLLGRWAPLRIHTP 218 Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 +C C C CP G + R+ + Sbjct: 219 TREKCDDCMDCYQVCPEPQVIKPALKG---------------GDATVPRIGEIN------ 257 Query: 226 RCHTIMNCTQSCPKGL 241 C C CP+ + Sbjct: 258 -CTNCGRCIDVCPQSI 272 >gi|320120380|gb|ADW16133.1| hypothetical protein HMPREF0389_01687 [Filifactor alocis ATCC 35896] Length = 1172 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 19/74 (25%), Gaps = 3/74 (4%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV C CS CP + + + +G R P Sbjct: 679 WNPENCVQCNQCSFVCPHAVIRPFLMTEEETKRYGAKGIPANGKGLEGYRYRIQISPL-- 736 Query: 225 YRCHTIMNCTQSCP 238 C NC CP Sbjct: 737 -DCTGCGNCADVCP 749 >gi|237736965|ref|ZP_04567446.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium mortiferum ATCC 9817] gi|229420827|gb|EEO35874.1| pyruvate-flavodoxin oxidoreductase [Fusobacterium mortiferum ATCC 9817] Length = 1191 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 5/82 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 C+ C CS CP +L +A + + + G+ L+ L+ Sbjct: 693 HVPEWKAENCIQCNQCSYVCP--HAVIRPFL-MTEEEKAASPVELTTIKPVGKGLEGLQY 749 Query: 221 PFRLY--RCHTIMNCTQSCPKG 240 ++ C +C CP Sbjct: 750 RMQVSTLDCTGCGSCANVCPAK 771 >gi|228983790|ref|ZP_04143987.1| formate dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775985|gb|EEM24354.1| formate dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 978 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|222054990|ref|YP_002537352.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter sp. FRC-32] gi|221564279|gb|ACM20251.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter sp. FRC-32] Length = 328 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 32/124 (25%), Gaps = 23/124 (18%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR--------WL 203 + + D C+ C CS CP+ + R G A R + Sbjct: 205 QRHETFDDSPLWDDFARRCLSCGACSLCCPTCYCLDVREYGALDGQTATRIQEWDNCLFK 264 Query: 204 IDS--------RDEFQGE-RLDNLEDPFRLY------RCHTIMNCTQSCPKGLNPAKAIA 248 R Q R L + C C + CP ++ + Sbjct: 265 AHGEVTGGINFRKTRQERFRYRFLHKYYGFGPLRGVISCVGCGRCREVCPVRIDLLELFC 324 Query: 249 KIKM 252 + + Sbjct: 325 EQRN 328 >gi|209693676|ref|YP_002261604.1| putative ferredoxin [Aliivibrio salmonicida LFI1238] gi|208007627|emb|CAQ77731.1| putative ferredoxin [Aliivibrio salmonicida LFI1238] Length = 472 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 24/91 (26%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGER-LDNL 218 G + C CP Y + Y D R E +G R Sbjct: 211 AACTYGNAGWMRSIVCLHMCP-YARFQSAMFDKDTYIVGY----DPKRGESRGPRSRKKD 265 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 HKALGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|164663359|ref|XP_001732801.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] gi|159106704|gb|EDP45587.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] Length = 245 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 20/118 (16%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + L + + +F+ +I+ + + H R+ G C+ C C CP+ Sbjct: 101 RGLWMTLENFFRPPYTIQYPFEKG--PVSPRFRGEHALRRYPTGEERCIACKLCEAICPA 158 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + R+ ID +C C ++CP Sbjct: 159 LAITIESEPRMDGSRRTTRYDIDMT------------------KCIYCGMCQEACPVD 198 >gi|148262230|ref|YP_001228936.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|148265606|ref|YP_001232312.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146395730|gb|ABQ24363.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] gi|146399106|gb|ABQ27739.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 315 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 22/96 (22%), Gaps = 9/96 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + CV C C + CP + + R + Sbjct: 197 FWKEHFSRCVRCLACRSICPFCYCEQC----MCDRNRPQAVETSPRPAGNMA-WHIVRAM 251 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 RC C ++CP + + + Sbjct: 252 HLSGRCAGCAECERACPMDIPL----NLLNRKMAKE 283 >gi|148254249|ref|YP_001238834.1| nitrogen fixation protein [Bradyrhizobium sp. BTAi1] gi|146406422|gb|ABQ34928.1| nitrogen fixation protein [Bradyrhizobium sp. BTAi1] Length = 488 Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 3/82 (3%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE-FQGERLDNLEDPFR 223 L + C CP + A+ + +SR + L L P Sbjct: 214 YTLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYRYDRGESRMSVKKAAELRALGQPAG 273 Query: 224 LYRCHTIMNCTQSCPKGLNPAK 245 C C CP G++ Sbjct: 274 --DCIDCKQCVAVCPTGIDIRD 293 >gi|315187124|gb|EFU20881.1| Fe-S cluster domain protein [Spirochaeta thermophila DSM 6578] Length = 574 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 35/103 (33%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R +C C C CP + E ++ L Sbjct: 4 QRLIYTVTSDCFDCYKCIRECPVKAIRIS--------------------SGRAEVVEEL- 42 Query: 220 DPFRLYRCHTIMNCTQSCPKG-------LNPAKAIAKIKMMLL 255 C +C + CP G ++ AK I ++ ++ Sbjct: 43 -------CLYCGHCVEVCPSGAKRVRSDVDRAKTILSLRSKVV 78 >gi|326777493|ref|ZP_08236758.1| D-lactate dehydrogenase (cytochrome) [Streptomyces cf. griseus XylebKG-1] gi|326657826|gb|EGE42672.1| D-lactate dehydrogenase (cytochrome) [Streptomyces cf. griseus XylebKG-1] Length = 961 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + + ++ G R + Sbjct: 537 RRCVGVAKCRTTGPSGAGVMCPSFRATGEEAHSTRGRARLLHEMLAGEVITDGWRSTEVR 596 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 597 DA--LDLCLSCKGCRSDCPVGVD 617 >gi|182436895|ref|YP_001824614.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465411|dbj|BAG19931.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 944 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 10/83 (12%) Query: 168 YECVMCACCSTS--------CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T+ CPS+ + + ++ G R + Sbjct: 520 RRCVGVAKCRTTGPSGAGVMCPSFRATGEEAHSTRGRARLLHEMLAGEVITDGWRSTEVR 579 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C + C CP G++ Sbjct: 580 DA--LDLCLSCKGCRSDCPVGVD 600 >gi|170759059|ref|YP_001787930.1| hypothetical protein CLK_1997 [Clostridium botulinum A3 str. Loch Maree] gi|169406048|gb|ACA54459.1| cysteine-rich domain protein [Clostridium botulinum A3 str. Loch Maree] Length = 381 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 63 YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 95 >gi|164686402|ref|ZP_02210432.1| hypothetical protein CLOBAR_02840 [Clostridium bartlettii DSM 16795] gi|164602004|gb|EDQ95469.1| hypothetical protein CLOBAR_02840 [Clostridium bartlettii DSM 16795] Length = 1177 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP + ++ + +G+ + L+ Sbjct: 682 PEWKPENCIQCNRCSFVCPHACIRPVLVTEEELAAAPEAFVA---VDAKGKEVKGLKYRM 738 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++ C NC CP Sbjct: 739 QVSTMDCTGCGNCADVCPAK 758 >gi|104782052|ref|YP_608550.1| iron-sulfur cluster-binding protein [Pseudomonas entomophila L48] gi|95111039|emb|CAK15759.1| putative iron-sulfur cluster-binding protein [Pseudomonas entomophila L48] Length = 469 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 5/73 (6%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMN 232 A C CP Y L AY SR E +G R + L C Sbjct: 218 AVCMHMCP-YARFQSVMFDKDTLAVAYDP---SRGESRGPRKKGSDPRSQGLGDCIDCTL 273 Query: 233 CTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 274 CVQVCPTGIDIRD 286 >gi|49480180|ref|YP_034847.1| formate dehydrogenase subunit alpha, anaerobic [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331736|gb|AAT62382.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 978 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|83312473|ref|YP_422737.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1] gi|82947314|dbj|BAE52178.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1] Length = 500 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 13/123 (10%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW--- 202 + R + CV C C+ C + D P +R Sbjct: 54 EKRAVEHMGSLVSKYRSLQVYMDICVKCGACTDKCHYFLGTHDPKNMPVARADLFRSVYR 113 Query: 203 --------LIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + D L++ F + C C+ CP G++ A+ I+ Sbjct: 114 RYFTPAGKIAPGLVGARDMTKDVLDEWFNYFHQCSQCRRCSVFCPYGIDTAE-ISMAARD 172 Query: 254 LLD 256 ++D Sbjct: 173 IMD 175 >gi|47567169|ref|ZP_00237885.1| NAD-dependent formate dehydrogenase, alpha subunit [Bacillus cereus G9241] gi|47556225|gb|EAL14560.1| NAD-dependent formate dehydrogenase, alpha subunit [Bacillus cereus G9241] Length = 978 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|227499429|ref|ZP_03929540.1| pyruvate synthase [Anaerococcus tetradius ATCC 35098] gi|227218491|gb|EEI83734.1| pyruvate synthase [Anaerococcus tetradius ATCC 35098] Length = 1175 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 19/82 (23%), Gaps = 13/82 (15%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP +L + + D + Sbjct: 682 PEWQIDNCIQCNQCSYVCP--HAVIRPFLVTEEEKANA-----PEGFTTKKAIGKGMDGY 734 Query: 223 RLY------RCHTIMNCTQSCP 238 C NC CP Sbjct: 735 EFRIQVSPLDCTGCGNCADVCP 756 >gi|281420085|ref|ZP_06251084.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella copri DSM 18205] gi|281405885|gb|EFB36565.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Prevotella copri DSM 18205] Length = 1192 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 5/88 (5%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + E + + C+ C CS CP ++ A + ++D Sbjct: 675 FEKRGVEAFVPVWNVENCIQCNKCSFVCP--HAAIRPFVLT-DEELAGIEGLKTQDVKAP 731 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCP 238 + L + + C NC CP Sbjct: 732 KALAGMHFRIEISVLDCLGCGNCADVCP 759 >gi|88603270|ref|YP_503448.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein [Methanospirillum hungatei JF-1] gi|88188732|gb|ABD41729.1| formate dehydrogenase, beta subunit (F420) [Methanospirillum hungatei JF-1] Length = 414 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 20/80 (25%), Gaps = 8/80 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + +C+ C C +CP + P W I + Sbjct: 286 MMSESSKCIKCYACVEACPICYCIECSTKKP--------WYIAPGVLPTSFMFHLIRFAH 337 Query: 223 RLYRCHTIMNCTQSCPKGLN 242 C C + CP + Sbjct: 338 VSDSCINCGQCEELCPMEIP 357 >gi|54302442|ref|YP_132435.1| putative formate dehydrogenase, alphasubunit [Photobacterium profundum SS9] gi|46915864|emb|CAG22635.1| putative formate dehydrogenase, alphasubunit [Photobacterium profundum SS9] Length = 1394 Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 9/95 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLGPAILLQAYRWLID 205 + + ++ + C+ C C +C + + A A R + Sbjct: 606 TNESCQKFHVDDSSEFIVFDANRCISCGQCVEACNEKAVHGTLSFAKNADGSSASR--PE 663 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R F C C Q CP G Sbjct: 664 CRPGFDK------GYSMGDSNCVQCGACVQVCPTG 692 >gi|332885913|gb|EGK06157.1| hypothetical protein HMPREF9456_00031 [Dysgonomonas mossii DSM 22836] Length = 195 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 14/116 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + + +++ + + + + + C C C +CP+ Sbjct: 22 MRITWGELWTKKITEQYPENRATLVIPDRFRGELTMPHDENNEHACTACGICQMNCPN-- 79 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +Q I++ D + + LD L C C +CP Sbjct: 80 ----------GTIQVISRSIETEDGKKKKVLDKYIYDLGL--CTFCNLCVITCPSD 123 >gi|289423744|ref|ZP_06425539.1| glutamate synthase (NADPH), homotetrameric [Peptostreptococcus anaerobius 653-L] gi|289155783|gb|EFD04453.1| glutamate synthase (NADPH), homotetrameric [Peptostreptococcus anaerobius 653-L] Length = 464 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%) Query: 226 RCHTIM--NCTQSCPKGLNPAKAIAKIKMMLLDRK 258 RC C + CP +N I ++K ++ Sbjct: 39 RCLNCKKPRCVEGCPVSINIPDFIQELKEGNIEEA 73 >gi|322421842|ref|YP_004201065.1| NADH-quinone oxidoreductase subunit I [Geobacter sp. M18] gi|320128229|gb|ADW15789.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M18] Length = 132 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M +IK L + +SH + + +++ + KP L + +CV C C T Sbjct: 3 MPLIKGLQITISHMFKKPVTLQYPTERPEIKPGFRGLHAL---NVSHDKAKCVACYLCPT 59 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + A ++ ID RC C ++CP Sbjct: 60 VCPAKCITVEAGEDENHDKYAAKYEIDML------------------RCIFCGYCVEACP 101 Query: 239 KG 240 Sbjct: 102 VD 103 >gi|228913279|ref|ZP_04076913.1| formate dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846330|gb|EEM91348.1| formate dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 978 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|229194900|ref|ZP_04321683.1| formate dehydrogenase [Bacillus cereus m1293] gi|228588604|gb|EEK46639.1| formate dehydrogenase [Bacillus cereus m1293] Length = 978 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|222110094|ref|YP_002552358.1| NADH dehydrogenase subunit I [Acidovorax ebreus TPSY] gi|221729538|gb|ACM32358.1| NADH-quinone oxidoreductase, chain I [Acidovorax ebreus TPSY] Length = 170 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 34 YTFRRKVTVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALAITIESDVR 93 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 94 EDGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 123 >gi|254171912|ref|ZP_04878588.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Thermococcus sp. AM4] gi|214033808|gb|EEB74634.1| hydrogenase (cytochrome-c3 hydrogenase beta chain) [Thermococcus sp. AM4] Length = 367 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 22/107 (20%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPS--------------------YWWNSDRYLGPAILL 197 + + +C+ C C+T+CP+ W+S ++ ++ Sbjct: 221 MQHPMWEEESEKCLACGICNTTCPTCRCYEVQDIVNLDGVTGYRERRWDSCQFRSHGLVA 280 Query: 198 QAYRWLIDSRDEFQGERL--DNLEDPFRLYRCHTIMNCTQSCPKGLN 242 + + +D F L ++ + L C CT CP G++ Sbjct: 281 GGHNFRPTKKDRFMNRYLCKNSYNEKLGLSFCVGCGRCTAFCPAGIS 327 >gi|187932923|ref|YP_001885655.1| respiratory-chain NADH dehydrogenase domain, 51 kda subunit [Clostridium botulinum B str. Eklund 17B] gi|187721076|gb|ACD22297.1| respiratory-chain NADH dehydrogenase domain, 51 kda subunit [Clostridium botulinum B str. Eklund 17B] Length = 442 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 14/124 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + ++ + P D+ K C C C+ CP + + P + Sbjct: 221 KKNKGFVILKNDHPLIRKKSVTMDQAKKINKSSCEQCRMCTDMCPRFLLGHNT--QPHKM 278 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT-QSCPKGLNPAKAIAKIKMMLL 255 ++A + +D+ + + +L C C SCP GL P + K L Sbjct: 279 MRAMSYNLDNIEGQKIAQL-----------CCQCNLCELFSCPAGLYPKSSNLYFKQKLA 327 Query: 256 DRKI 259 ++ I Sbjct: 328 EQNI 331 >gi|45358548|ref|NP_988105.1| acetyl-CoA decarbonylase/synthase complex subunit alpha [Methanococcus maripaludis S2] gi|44921306|emb|CAF30541.1| CO dehydrogenase/acetyl-CoA synthase complex subunit alpha [Methanococcus maripaludis S2] Length = 778 Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 17/95 (17%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 + EC C C CP+ R ++D+ L L + + Sbjct: 400 PEIAKECTECGWCVRVCPNN-----------------RPIMDAVTSAAKGDLTKLANLYE 442 Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 C+T C + C + L I K + + Sbjct: 443 HDMCYTCGRCEEECERNLPLVSFITKAGDHFVKNQ 477 >gi|329962487|ref|ZP_08300487.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] gi|328530043|gb|EGF56931.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] Length = 187 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + K + + + + CV C C T+CP+ Sbjct: 42 MKTTMTVFCRKKTTEQYPENRATLKLSDRFRGTLTMPHNANNEHHCVACGLCQTACPN-- 99 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ +I++ + + + L + L C C +CP Sbjct: 100 ----------DTIKVTSEMIETEEGKKKKILAKY--EYDLGSCMFCQLCVNACP 141 >gi|319793816|ref|YP_004155456.1| D-lactate dehydrogenase (cytochrome) [Variovorax paradoxus EPS] gi|315596279|gb|ADU37345.1| D-lactate dehydrogenase (cytochrome) [Variovorax paradoxus EPS] Length = 1028 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 11/94 (11%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R + + + + + Sbjct: 598 EMCNNNGHCRKFDAGTMCPSYRVTRDEQHLTRGRANTLRLALSGQLGADAFTSEAMHETM 657 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 L C C + CP G++ +AK+K+ LD Sbjct: 658 DL--CVGCKGCKRDCPTGVD----MAKMKIEFLD 685 >gi|256545265|ref|ZP_05472630.1| pyruvate-ferredoxin oxidoreductase [Anaerococcus vaginalis ATCC 51170] gi|256399092|gb|EEU12704.1| pyruvate-ferredoxin oxidoreductase [Anaerococcus vaginalis ATCC 51170] Length = 1176 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 22/98 (22%), Gaps = 13/98 (13%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P + + + C+ C CS CP +L Sbjct: 665 EPGTTQYEKRGIALNVPEWQIDNCIQCNQCSYVCP--HAVIRPFLLTEEEKANA-----P 717 Query: 207 RDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCP 238 + + D + C NC CP Sbjct: 718 EGFETKKAIGKGMDGYDFRIQVSPLDCTGCGNCADVCP 755 >gi|253577809|ref|ZP_04855081.1| ferredoxin [Ruminococcus sp. 5_1_39B_FAA] gi|251850127|gb|EES78085.1| ferredoxin [Ruminococcus sp. 5_1_39BFAA] Length = 225 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 44/169 (26%) Query: 78 RSCREGICGSCGM--NIDGTNTL-ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYS 134 CR G CG+C I G N L C+ ++ + V +P K L Sbjct: 38 CGCRHGFCGACATIYRIKGENELKTCLACQTQVQEGMYVASIPFFPTDKRLY-------- 89 Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPA 194 + +Y C+ C C+ +C + N +Y+ Sbjct: 90 --------------NIEDLKPNQQVMMELYPEIYSCIGCNACTKAC-TQDLNVMQYI--- 131 Query: 195 ILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 +R + + + C + C+ CP G++ Sbjct: 132 ---------------AYAQRGELEKCAEESFDCVSCGCCSVRCPAGISH 165 >gi|222094341|ref|YP_002528400.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus cereus Q1] gi|221238398|gb|ACM11108.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus cereus Q1] Length = 978 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|217420611|ref|ZP_03452116.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 576] gi|237813332|ref|YP_002897783.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei MSHR346] gi|217396023|gb|EEC36040.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 576] gi|237504923|gb|ACQ97241.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei MSHR346] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|167903758|ref|ZP_02490963.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei NCTC 13177] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|167895371|ref|ZP_02482773.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei 7894] gi|167919996|ref|ZP_02507087.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei BCC215] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|167830015|ref|ZP_02461486.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 9] gi|226197869|ref|ZP_03793443.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|225930057|gb|EEH26070.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei Pakistan 9] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|167720689|ref|ZP_02403925.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei DM98] Length = 978 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 181 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 230 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 231 E----CVSCGACVAACP 243 >gi|134277066|ref|ZP_01763781.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 305] gi|134250716|gb|EBA50795.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 305] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|53724804|ref|YP_102259.1| formate dehydrogenase subunit alpha [Burkholderia mallei ATCC 23344] gi|121599913|ref|YP_993895.1| formate dehydrogenase, alpha subunit [Burkholderia mallei SAVP1] gi|124385511|ref|YP_001026956.1| formate dehydrogenase, alpha subunit [Burkholderia mallei NCTC 10229] gi|126448429|ref|YP_001079756.1| formate dehydrogenase, alpha subunit [Burkholderia mallei NCTC 10247] gi|238561694|ref|ZP_00441684.2| formate dehydrogenase, alpha subunit [Burkholderia mallei GB8 horse 4] gi|251766976|ref|ZP_02265541.2| formate dehydrogenase, alpha subunit [Burkholderia mallei PRL-20] gi|254203944|ref|ZP_04910304.1| formate dehydrogenase, alpha subunit [Burkholderia mallei FMH] gi|254208924|ref|ZP_04915272.1| formate dehydrogenase, alpha subunit [Burkholderia mallei JHU] gi|254360021|ref|ZP_04976291.1| formate dehydrogenase, alpha subunit [Burkholderia mallei 2002721280] gi|52428227|gb|AAU48820.1| formate dehydrogenase, alpha subunit [Burkholderia mallei ATCC 23344] gi|121228723|gb|ABM51241.1| formate dehydrogenase, alpha subunit [Burkholderia mallei SAVP1] gi|124293531|gb|ABN02800.1| putative sulfite reductase [NADPH] flavoprotein, alpha-component [Burkholderia mallei NCTC 10229] gi|126241299|gb|ABO04392.1| putative sulfite reductase [NADPH] flavoprotein, alpha-component [Burkholderia mallei NCTC 10247] gi|147745456|gb|EDK52536.1| formate dehydrogenase, alpha subunit [Burkholderia mallei FMH] gi|147750800|gb|EDK57869.1| formate dehydrogenase, alpha subunit [Burkholderia mallei JHU] gi|148029261|gb|EDK87166.1| formate dehydrogenase, alpha subunit [Burkholderia mallei 2002721280] gi|238524153|gb|EEP87588.1| formate dehydrogenase, alpha subunit [Burkholderia mallei GB8 horse 4] gi|243064205|gb|EES46391.1| formate dehydrogenase, alpha subunit [Burkholderia mallei PRL-20] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|147669455|ref|YP_001214273.1| NADH-quinone oxidoreductase, chain I [Dehalococcoides sp. BAV1] gi|289432722|ref|YP_003462595.1| NADH-quinone oxidoreductase, chain I [Dehalococcoides sp. GT] gi|146270403|gb|ABQ17395.1| NADH-quinone oxidoreductase, chain I [Dehalococcoides sp. BAV1] gi|288946442|gb|ADC74139.1| NADH-quinone oxidoreductase, chain I [Dehalococcoides sp. GT] Length = 183 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 18/102 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 PW+ P+ + + Q I C+ C C+ +CP N + Sbjct: 21 HLFRPWITVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEV------- 73 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SR E + ++D++ F L C C +SCP Sbjct: 74 ---------SRGEDRKLKVDHMSIDFGL--CIFCGLCVESCP 104 >gi|254195604|ref|ZP_04902031.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei S13] gi|169652350|gb|EDS85043.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei S13] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|126438525|ref|YP_001059920.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 668] gi|126218018|gb|ABN81524.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 668] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|254181072|ref|ZP_04887670.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 1655] gi|184211611|gb|EDU08654.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 1655] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|53720140|ref|YP_109126.1| NAD-dependent formate dehydrogenase subunit alpha [Burkholderia pseudomallei K96243] gi|76810667|ref|YP_334390.1| NAD-dependent formate dehydrogenase subunit alpha [Burkholderia pseudomallei 1710b] gi|167739673|ref|ZP_02412447.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei 14] gi|167816881|ref|ZP_02448561.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei 91] gi|167912020|ref|ZP_02499111.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei 112] gi|254192308|ref|ZP_04898797.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254258592|ref|ZP_04949646.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 1710a] gi|254295605|ref|ZP_04963063.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 406e] gi|52210554|emb|CAH36537.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei K96243] gi|76580120|gb|ABA49595.1| NAD-dependent formate dehydrogenase alpha subunit [Burkholderia pseudomallei 1710b] gi|157805558|gb|EDO82728.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 406e] gi|157987503|gb|EDO95279.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254217281|gb|EET06665.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 1710a] Length = 984 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAG--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|325921403|ref|ZP_08183260.1| NADH dehydrogenase subunit I [Xanthomonas gardneri ATCC 19865] gi|325548161|gb|EGD19158.1| NADH dehydrogenase subunit I [Xanthomonas gardneri ATCC 19865] Length = 162 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 37 PMEKFPQSPRFRGVHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGSRRTTRYD 96 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 97 ID------------------LFKCIFCGFCEESCPVD 115 >gi|311104666|ref|YP_003977519.1| NADH-quinone oxidoreductase subunit 9 [Achromobacter xylosoxidans A8] gi|310759355|gb|ADP14804.1| NADH-quinone oxidoreductase subunit 9 [Achromobacter xylosoxidans A8] Length = 162 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + +F+ R + + H R+ +G C+ C C Sbjct: 15 ELLKGMRLTGKYFFK--RKVTLRYPQEKTPASPRFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + D RD+ D L +C C +SCP Sbjct: 73 CPALAITIES---------------DQRDDGTRRTTRYDID---LTKCIFCGFCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|313114797|ref|ZP_07800297.1| electron transport complex, RnfABCDGE type, C subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310622852|gb|EFQ06307.1| electron transport complex, RnfABCDGE type, C subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 444 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 18/91 (19%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 + + + + C+ C C CP L P + QAY +RD + + Sbjct: 353 IFLSKAAAEPAPVNPCIRCGRCVEYCPM-------GLEPVEVNQAYA----ARDVQELGK 401 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 L C +C+ CP + Sbjct: 402 LHA-------DYCFNCGSCSFVCPAKRPVTQ 425 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%) Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 C C + CP GL P ++ R + Sbjct: 368 CIRCGRCVEYCPMGLEPV----EVNQAYAARDV 396 >gi|319763994|ref|YP_004127931.1| cytochrome c oxidase accessory protein ccog [Alicycliphilus denitrificans BC] gi|330823742|ref|YP_004387045.1| cytochrome c oxidase accessory protein CcoG [Alicycliphilus denitrificans K601] gi|317118555|gb|ADV01044.1| cytochrome c oxidase accessory protein CcoG [Alicycliphilus denitrificans BC] gi|329309114|gb|AEB83529.1| cytochrome c oxidase accessory protein CcoG [Alicycliphilus denitrificans K601] Length = 480 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 9/88 (10%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS--------RDEFQGERLD 216 + + +Y+ P Q+ + D+ R E +G R Sbjct: 204 QIFWVFFYGFATYGNAGYLREQVCKYMCPYARFQSAMFDKDTLIVTYDPERGEPRGPRTK 263 Query: 217 NLE-DPFRLYRCHTIMNCTQSCPKGLNP 243 +++ L C C Q CP G++ Sbjct: 264 SVDYKAKGLGDCIDCTLCVQVCPTGIDI 291 >gi|293557151|ref|ZP_06675705.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1039] gi|291600720|gb|EFF31018.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1039] Length = 1230 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 8/147 (5%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + + ++ + V + L + +Q ++ + S Sbjct: 616 AIPEHWRTLEMPEKINKRNTGYVQEILEPVNAQEGNQLSVGTLVANGMTTGEMPLGMASI 675 Query: 159 EDR-----QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 E R C MC C+ CP + +++ G Sbjct: 676 EKRGVALEVPEWISDRCTMCNECAFVCPHAAIRPFLADEEEMEEAPEGFIVREMRGADGV 735 Query: 214 RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + C C ++CP Sbjct: 736 KYRIQV---SVEDCTGCGLCVEACPAK 759 >gi|283798986|ref|ZP_06348139.1| formate hydrogenlyase subunit 6 [Clostridium sp. M62/1] gi|291073254|gb|EFE10618.1| formate hydrogenlyase subunit 6 [Clostridium sp. M62/1] Length = 112 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L A A+++ L RC Sbjct: 35 QCIGCAACVNACPSNALTVETLL--ATNELAWQFN--------------------LGRCI 72 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 73 FCGRCEEVCP 82 >gi|251778554|ref|ZP_04821474.1| hydrogenase-1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082869|gb|EES48759.1| hydrogenase-1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 576 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 37/212 (17%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREG-ICGSCGMNIDGTNTLACVKDMKDI 107 V + G +L+ L +I PTL C CG C + I+G LA + + Sbjct: 10 EVSVKEEGKTILEVALENNIEI-PTLCYLNDCSNTGKCGVCAVEIEGQEELALSCET-LV 67 Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS-----------------IEPWLKTVSPKP 150 + + + V + + + ++ +H I+ + P Sbjct: 68 QDKMVIR-TDSEKVQEAIKLRVAEMLDKHEFKCGPCKRREDCEFLKLVIKTKARANKPFI 126 Query: 151 AKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K+ + +DR K + +CV+C C +C + + + D+ D Sbjct: 127 VKDKSEYVDDRSKSIVIDRSKCVLCGRCEAACSEKTAT-----------NSIKIIDDNGD 175 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D C C +CP Sbjct: 176 KKVATIDGKCFDDT---NCLLCGQCVAACPVD 204 >gi|229056364|ref|ZP_04195780.1| formate dehydrogenase [Bacillus cereus AH603] gi|228720969|gb|EEL72514.1| formate dehydrogenase [Bacillus cereus AH603] Length = 980 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 55/216 (25%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D V ++ + L + C C +C + ++G+ A Sbjct: 4 QTVRVTVDGKEFFVSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGSLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLEDGMHIERQSERAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMEIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|229165530|ref|ZP_04293309.1| formate dehydrogenase [Bacillus cereus AH621] gi|228617932|gb|EEK74978.1| formate dehydrogenase [Bacillus cereus AH621] Length = 980 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 55/216 (25%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D V ++ + L + C C +C + ++G+ A Sbjct: 4 QTVRVTVDGKEFFVSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGSLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLEDGMHIERQSERAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMEIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|322806939|emb|CBZ04509.1| putative iron-sulfur binding reductase [Clostridium botulinum H04402 065] Length = 381 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 63 YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 95 >gi|228944343|ref|ZP_04106716.1| formate dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815245|gb|EEM61493.1| formate dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 978 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|196035704|ref|ZP_03103107.1| molybdopterin oxidoreductase family protein [Bacillus cereus W] gi|195991671|gb|EDX55636.1| molybdopterin oxidoreductase family protein [Bacillus cereus W] Length = 978 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|167589050|ref|ZP_02381438.1| FAD linked oxidase domain protein [Burkholderia ubonensis Bu] Length = 804 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 7/88 (7%) Query: 158 HEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E + C+ C + CPSY + + ++ + Sbjct: 389 PEGDGMQRAIERCIGMGKCRSLDGGTMCPSYRATREEKFSTRGRAHLFWEMLQG--DVIK 446 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + ++ E L C C CP Sbjct: 447 DGWNSAEVKEALDACLGCKGCKSDCPTH 474 >gi|51473963|ref|YP_067720.1| NADH dehydrogenase subunit I [Rickettsia typhi str. Wilmington] gi|81389938|sp|Q68VV4|NUOI_RICTY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|51460275|gb|AAU04238.1| NADH dehydrogenase (ubiquinone) subunit I [Rickettsia typhi str. Wilmington] Length = 159 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 24/124 (19%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 +++ L + + +F+ +I + H R+ +G C+ C C Sbjct: 11 YEIVRGLTLTLKYFFKPKVTINY--PYEKSPVSPRFKGEHALRRYENGEERCIACKLCEA 68 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQS 236 CP+ QA D RD+ R D C C ++ Sbjct: 69 VCPA---------------QAIVIESDERDDGSRRTTRYDIDMTK-----CIYCGLCQEA 108 Query: 237 CPKG 240 CP Sbjct: 109 CPVD 112 >gi|160891809|ref|ZP_02072812.1| hypothetical protein BACUNI_04266 [Bacteroides uniformis ATCC 8492] gi|156858287|gb|EDO51718.1| hypothetical protein BACUNI_04266 [Bacteroides uniformis ATCC 8492] Length = 467 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M H R+ P + + LL+ R C C C CP Sbjct: 326 MTYMEHLQDNLRTFSPLVP--CTEEEFTLLEDTAQRMLQYPTVPCNDCKYCMP-CPYGLD 382 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 L + +S+DE + R L R RC C C Sbjct: 383 IPAILLHYNRCINEGNVPQNSQDENYREARRAFLIGYDRSVPRLRQANRCTGCGQCNPHC 442 Query: 238 PKGLNPAKAIAKI 250 P+G++ + +I Sbjct: 443 PQGIDIPAKLQEI 455 >gi|52144723|ref|YP_082108.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus cereus E33L] gi|51978192|gb|AAU19742.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus cereus E33L] Length = 978 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|319779206|ref|YP_004130119.1| NADH-ubiquinone oxidoreductase chain I [Taylorella equigenitalis MCE9] gi|317109230|gb|ADU91976.1| NADH-ubiquinone oxidoreductase chain I [Taylorella equigenitalis MCE9] Length = 161 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 20/130 (15%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + V +F+ + H R+ +G C+ C C Sbjct: 14 ELLKGMAVTGKYFFKP--KFTLRYPYEKTPMSPRFRGLHAQRRYENGEERCIACKLCEAV 71 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP A I+S + G R + D L +C C +SCP Sbjct: 72 CP-----------------AMAITIESHEREDGARKTSRYDID-LTKCIFCGFCEESCPV 113 Query: 240 GLNPAKAIAK 249 I + Sbjct: 114 EAIVETHIHE 123 >gi|301166686|emb|CBW26262.1| putative ferredoxin [Bacteriovorax marinus SJ] Length = 467 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLI-DSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C +CP Y + ++ AY + + R + ++ ++ + C C Sbjct: 219 FCLIACP-YGRFQSVMMDENSMVVAYDYNRGEPRRQKGQKKDEHAD-------CVDCYAC 270 Query: 234 TQSCPKGLNP 243 ++CP G++ Sbjct: 271 VKACPTGIDI 280 >gi|237743730|ref|ZP_04574211.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 7_1] gi|256028188|ref|ZP_05442022.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. D11] gi|260495794|ref|ZP_05815915.1| NADH dehydrogenase [Fusobacterium sp. 3_1_33] gi|289766120|ref|ZP_06525498.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. D11] gi|229432761|gb|EEO42973.1| nitrogen fixation iron-sulphur protein RNFC [Fusobacterium sp. 7_1] gi|260196641|gb|EEW94167.1| NADH dehydrogenase [Fusobacterium sp. 3_1_33] gi|289717675|gb|EFD81687.1| nitrogen fixation iron-sulfur protein RNFC [Fusobacterium sp. D11] Length = 438 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C+ C+ C ++CP + A Q DE Sbjct: 354 EEMRPYKTKSCISCSKCVSACP-MGLEPLMFDRLAANKQY--------DE---------M 395 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 + L C +C CP A+AI Sbjct: 396 AEYNLMDCIECGSCNYICPANRPLAEAI 423 >gi|227485074|ref|ZP_03915390.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172] gi|227236907|gb|EEI86922.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172] Length = 1175 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 19/82 (23%), Gaps = 13/82 (15%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP +L + + D F Sbjct: 682 PEWQIDNCIQCNQCSYVCP--HAVIRPFLVTEEEKANA-----PEGFETKKAIGKGMDGF 734 Query: 223 RLY------RCHTIMNCTQSCP 238 C NC CP Sbjct: 735 TFRIQVSPLDCTGCGNCADVCP 756 >gi|170078052|ref|YP_001734690.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Synechococcus sp. PCC 7002] gi|169885721|gb|ACA99434.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Synechococcus sp. PCC 7002] Length = 1178 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 7/97 (7%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--I 204 +K ++ C+ C C CP + + P +L A I Sbjct: 667 PTGTSKWEKRNVAQFIPEWDPEVCIQCGKCVMVCP-HATIRAKVYEPNLLGNAPESFKSI 725 Query: 205 DSRDEF-QGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D++D+ G++ P C C CP Sbjct: 726 DAKDKNFSGQKFTIQVAPE---DCTGCGVCVDVCPAK 759 >gi|196041311|ref|ZP_03108605.1| molybdopterin oxidoreductase family protein [Bacillus cereus NVH0597-99] gi|196027796|gb|EDX66409.1| molybdopterin oxidoreductase family protein [Bacillus cereus NVH0597-99] Length = 978 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|30260746|ref|NP_843123.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Ames] gi|47525864|ref|YP_017213.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183583|ref|YP_026835.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Sterne] gi|165871793|ref|ZP_02216437.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0488] gi|167635652|ref|ZP_02393963.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0442] gi|167640648|ref|ZP_02398909.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0193] gi|170688486|ref|ZP_02879693.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0465] gi|170708211|ref|ZP_02898657.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0389] gi|177653752|ref|ZP_02935853.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0174] gi|190568151|ref|ZP_03021060.1| molybdopterin oxidoreductase family protein [Bacillus anthracis Tsiankovskii-I] gi|218901784|ref|YP_002449618.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH820] gi|227816540|ref|YP_002816549.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. CDC 684] gi|228925778|ref|ZP_04088862.1| formate dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120240|ref|ZP_04249491.1| formate dehydrogenase [Bacillus cereus 95/8201] gi|229601455|ref|YP_002865191.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0248] gi|254684332|ref|ZP_05148192.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. CNEVA-9066] gi|254722134|ref|ZP_05183923.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A1055] gi|254738796|ref|ZP_05196499.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Western North America USA6153] gi|254743818|ref|ZP_05201502.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Kruger B] gi|254755020|ref|ZP_05207054.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Vollum] gi|254762246|ref|ZP_05214090.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Australia 94] gi|30254195|gb|AAP24609.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Ames] gi|47501012|gb|AAT29688.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177510|gb|AAT52886.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. Sterne] gi|164712518|gb|EDR18051.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0488] gi|167511363|gb|EDR86748.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0193] gi|167528911|gb|EDR91667.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0442] gi|170126867|gb|EDS95748.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0389] gi|170667511|gb|EDT18267.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0465] gi|172081144|gb|EDT66220.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0174] gi|190560643|gb|EDV14619.1| molybdopterin oxidoreductase family protein [Bacillus anthracis Tsiankovskii-I] gi|218539273|gb|ACK91671.1| molybdopterin oxidoreductase family protein [Bacillus cereus AH820] gi|227004272|gb|ACP14015.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. CDC 684] gi|228663281|gb|EEL18870.1| formate dehydrogenase [Bacillus cereus 95/8201] gi|228833793|gb|EEM79346.1| formate dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229265863|gb|ACQ47500.1| molybdopterin oxidoreductase family protein [Bacillus anthracis str. A0248] Length = 978 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|13474888|ref|NP_106458.1| ferredoxin 2[4Fe-4S] III, fdxB [Mesorhizobium loti MAFF303099] gi|14025644|dbj|BAB52244.1| ferredoxin 2[4Fe-4S] III; FdxB [Mesorhizobium loti MAFF303099] Length = 105 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 23/85 (27%), Gaps = 3/85 (3%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 C+ C C C S + A + D + + R+ Sbjct: 12 PWTPHYLTAIDGATCIGCGRCFKVC-SREVMHLHGVDDAGEILGICAGEDDDFDGEPNRM 70 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 + D RC C + CPK Sbjct: 71 VMIVDHAG--RCIGCGACGRVCPKN 93 >gi|255728045|ref|XP_002548948.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133264|gb|EER32820.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 231 Score = 42.1 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + M ++ + + H R+ G C+ C C Sbjct: 84 EIARGMYICMEMYFR--SPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 141 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 142 CPAQAITIEAEERIDGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 183 Query: 240 G 240 Sbjct: 184 D 184 >gi|218674605|ref|ZP_03524274.1| NADH-ubiquinone oxidoreductase protein, chain G [Rhizobium etli GR56] Length = 527 Score = 42.1 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 56/213 (26%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL------A 99 T V+ G VL + I L+R C C + I+G L A Sbjct: 9 QTLEVEA---GSTVLQAARRLGIDIPTFCYLKRLPPLASCRMCLVEIEGQRRLQPSCATA 65 Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDL--------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 + M + + L + D + + S Sbjct: 66 VTEGMVVRANTALIEETRASMLDMLLANHPLDCPICDKGGECELQNMVMAYGPRKSEFHD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + ED + I + C+ C C C + +G L A + Sbjct: 126 PKRVFHSEDIRLSPVIIMNVNRCIQCQRCVRMC-------EEVVGAVALGTAEK----GM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|158520862|ref|YP_001528732.1| molybdopterin oxidoreductase Fe4S4 region [Desulfococcus oleovorans Hxd3] gi|158509688|gb|ABW66655.1| molybdopterin oxidoreductase Fe4S4 region [Desulfococcus oleovorans Hxd3] Length = 376 Score = 42.1 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 25/90 (27%), Gaps = 18/90 (20%) Query: 154 LLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE 213 + I C+ C C +C N +A +L D D Sbjct: 155 YPMEMANPFIIRDFSRCIRCGRCVKACNEVQVN-----------KAIDYLRDDEDRILKI 203 Query: 214 RL---DNLEDPFRLYRCHTIMNCTQSCPKG 240 L+D C C Q+CP G Sbjct: 204 VAGDDKPLKDSE----CVFCGECVQACPVG 229 >gi|297180801|gb|ADI17007.1| polyferredoxin [uncultured Vibrionales bacterium HF0010_22E23] Length = 475 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 5/88 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 G + C CP + S + ++ + R E +G R + Sbjct: 213 CTYGNAGWMRSIMCLHICPYARFQSVMFDKDTFIVG----YDEKRGESRGPRSKKQDHKA 268 Query: 223 -RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 269 LGLGDCVDCNLCVQVCPTGIDIRDGLQY 296 >gi|299143379|ref|ZP_07036459.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517864|gb|EFI41603.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 1175 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 22/80 (27%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED-- 220 C+ C CS CP +L + ++ E L LE Sbjct: 689 PHWNKDNCIQCNQCSFVCP--HAAIRPFLLNTEEVANKPAEFETLAAKGKE-LAGLEYRI 745 Query: 221 PFRLYRCHTIMNCTQSCPKG 240 + C NC CP Sbjct: 746 QVSVLDCTGCGNCADVCPAK 765 >gi|261213239|ref|ZP_05927521.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio sp. RC341] gi|260837513|gb|EEX64216.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio sp. RC341] Length = 474 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 AICTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDAA-------RGEQRGPRARK 264 Query: 218 LE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|238757223|ref|ZP_04618410.1| Hydrogenase-4 component H [Yersinia aldovae ATCC 35236] gi|238704601|gb|EEP97131.1| Hydrogenase-4 component H [Yersinia aldovae ATCC 35236] Length = 184 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + L Sbjct: 33 PQYDAGQCIACGACTMACPANALTMETDLAKGTRQWQLF--------------------- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|255039058|ref|YP_003089679.1| cytochrome c oxidase accessory protein CcoG [Dyadobacter fermentans DSM 18053] gi|254951814|gb|ACT96514.1| cytochrome c oxidase accessory protein CcoG [Dyadobacter fermentans DSM 18053] Length = 479 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 7/83 (8%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ CP Y L + AY R E +G+ + Sbjct: 220 AVFYWNFAW-LREQACTVVCP-YGRLQSVLLDRNSINVAY---DHERGEPRGKLHKGSDR 274 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 275 TEG--DCINCFQCVAVCPTGIDI 295 >gi|209518988|ref|ZP_03267797.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. H160] gi|209500571|gb|EEA00618.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. H160] Length = 1010 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 31/96 (32%), Gaps = 9/96 (9%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C T CPSY D R I + G L + + Sbjct: 596 EMCNNNGHCRKFDAGTMCPSYRVTKDEQHLTRGRANTLRLAISGQLGESG--LASDDVKE 653 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + C + CP G++ AK KI+ K Sbjct: 654 TLDLCVSCKGCKRDCPTGVDMAKF--KIEARAARAK 687 >gi|182414283|ref|YP_001819349.1| NADH ubiquinone oxidoreductase 20 kDa subunit [Opitutus terrae PB90-1] gi|177841497|gb|ACB75749.1| NADH ubiquinone oxidoreductase 20 kDa subunit [Opitutus terrae PB90-1] Length = 285 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 13/88 (14%) Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 CA C+ CP+ + + A A + D +G + L RC Sbjct: 47 CAACAEVCPT------QAITVADSKVAPPGITDGTPGPRGNASALPKITLDLGRCVFCAE 100 Query: 233 CTQSCPKGLNPAKAIAKI--KMMLLDRK 258 C ++CP G AI + M + R+ Sbjct: 101 CVKTCPAG-----AITQTGDHRMAVRRR 123 >gi|317480291|ref|ZP_07939394.1| tat pathway signal sequence [Bacteroides sp. 4_1_36] gi|316903546|gb|EFV25397.1| tat pathway signal sequence [Bacteroides sp. 4_1_36] Length = 467 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M H R+ P + + LL+ R C C C CP Sbjct: 326 MTYMEHLQDNLRTFSPLVP--CTEEEFTLLEDTAQRMLQYPTVPCNDCKYCMP-CPYGLD 382 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 L + +S+DE + R L R RC C C Sbjct: 383 IPAILLHYNRCINEGNVPQNSQDENYREARRAFLIGYDRSVPRLRQANRCTGCGQCNPHC 442 Query: 238 PKGLNPAKAIAKI 250 P+G++ + +I Sbjct: 443 PQGIDIPAKLQEI 455 >gi|303325741|ref|ZP_07356184.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Desulfovibrio sp. 3_1_syn3] gi|302863657|gb|EFL86588.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Desulfovibrio sp. 3_1_syn3] Length = 1178 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C CS CP L L+ +++D E L L+ Sbjct: 680 PEWQVANCIQCCQCSFVCP--HAAIRPVLATEAELEGAPAGFETKDAMGKE-LKGLKFRI 736 Query: 223 RLY--RCHTIMNCTQSCPKG 240 ++Y C +C CP Sbjct: 737 QVYPEDCLGCGSCADICPAK 756 >gi|303247133|ref|ZP_07333408.1| response regulator receiver protein [Desulfovibrio fructosovorans JJ] gi|302491559|gb|EFL51444.1| response regulator receiver protein [Desulfovibrio fructosovorans JJ] Length = 1162 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 43/170 (25%), Gaps = 16/170 (9%) Query: 77 RRSCREGICGSCGMNIDGTNTLA------CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMS 130 R + G ID + + D G + PL + + Sbjct: 18 RAALDLAEAGHTVTVIDKRPHIGGILTRLDHQFPSDHCGMCKMLPLTEREASSEFCLRKG 77 Query: 131 HFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY 190 F+ + T R +CV C C+ CP + + Sbjct: 78 LFHRNIDIMLSSELTSLDGEPGAFSAVINRRSPFVDATKCVGCGACAKVCPV--SVPNEF 135 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + +L +D L C C ++CP G Sbjct: 136 -NAGLTSRGAVYLPVPHAIPNHYVVD-------LDACQRCWQCYEACPTG 177 >gi|167033385|ref|YP_001668616.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida GB-1] gi|166859873|gb|ABY98280.1| cytochrome c oxidase accessory protein CcoG [Pseudomonas putida GB-1] Length = 467 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIM 231 A C CP Y L AY D R E +G R + L C Sbjct: 216 AVCLHMCP-YARFQSVMFDKDTLAVAY----DPRRGETRGPRKKGSDVQAQGLGDCIDCT 270 Query: 232 NCTQSCPKGLNPAK 245 C Q CP G++ Sbjct: 271 LCVQVCPTGIDIRD 284 >gi|153004089|ref|YP_001378414.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027662|gb|ABS25430.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 407 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 19/74 (25%), Gaps = 20/74 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 V C+T CP LQ + + R C Sbjct: 169 FVRETFCATVCP------------YAKLQGVLFDRHTLVVAYDRRRAA--------DCVD 208 Query: 230 IMNCTQSCPKGLNP 243 C + CP G++ Sbjct: 209 CGACVRVCPTGIDI 222 >gi|307637939|gb|ADN80389.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori 908] gi|325996543|gb|ADZ51948.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori 2018] gi|325998132|gb|ADZ50340.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori 2017] Length = 220 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + H Sbjct: 13 AEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|229137387|ref|ZP_04265999.1| formate dehydrogenase [Bacillus cereus BDRD-ST26] gi|228646086|gb|EEL02308.1| formate dehydrogenase [Bacillus cereus BDRD-ST26] Length = 969 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 43/173 (24%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + +DG AC K+ + L + + + + Sbjct: 38 QTCDTCIVEVDGKLMRACSTQIENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNN 97 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 98 NGNCKVHNTVHMMGIEEQKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQV 157 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + W +D R + ++ D C + C CP Sbjct: 158 NETISID---------WSLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 196 >gi|182416719|ref|ZP_02948119.1| pyruvate:ferredoxin oxidoreductase [Clostridium butyricum 5521] gi|237667533|ref|ZP_04527517.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379444|gb|EDT76938.1| pyruvate:ferredoxin oxidoreductase [Clostridium butyricum 5521] gi|237655881|gb|EEP53437.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1171 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 24/88 (27%), Gaps = 7/88 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP +L S + + L Sbjct: 683 PEWIPDRCIQCNQCSYVCP--HATIRPFLLTDEEKNKAPQGFKSVLPKGIKSEEQLNYTI 740 Query: 223 RLY--RCHTIMNCTQSCPKGLNPAKAIA 248 + C NC + CP P KA+ Sbjct: 741 GVSPLDCTGCGNCAEVCPA---PGKALI 765 >gi|187251216|ref|YP_001875698.1| pyruvate:ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] gi|186971376|gb|ACC98361.1| Pyruvate:ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] Length = 1185 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 20/79 (25%), Gaps = 2/79 (2%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C CS CP Y A L S D + + Sbjct: 684 CPQWDPEVCIQCGICSLVCPHAAIRMKAY--SADQLDNAPKTFKSADGKADLAGNKVTIQ 741 Query: 222 FRLYRCHTIMNCTQSCPKG 240 + C C +CP Sbjct: 742 VAVEDCTGCGACVFNCPAK 760 >gi|153938858|ref|YP_001391909.1| hypothetical protein CLI_2675 [Clostridium botulinum F str. Langeland] gi|152934754|gb|ABS40252.1| cysteine-rich domain protein [Clostridium botulinum F str. Langeland] Length = 381 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 63 YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 95 >gi|150392337|ref|YP_001322386.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149952199|gb|ABR50727.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Alkaliphilus metalliredigens QYMF] Length = 1171 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 30/102 (29%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG----ERLDNL 218 + +C+ C C+ CP +L+D ++ Q + L + Sbjct: 682 PEWQMEKCIQCNQCAYVCP--------------HAAIRPFLVDEKEAAQAPEGFKTLKAM 727 Query: 219 EDPF-RLY--------RCHTIMNCTQSCPKGLNPAKAIAKIK 251 F L C NC CP KAI ++K Sbjct: 728 GKEFNGLQYRLQVSTLDCTGCGNCVDICPA--PKGKAI-EMK 766 >gi|229010017|ref|ZP_04167231.1| formate dehydrogenase [Bacillus mycoides DSM 2048] gi|228751150|gb|EEM00962.1| formate dehydrogenase [Bacillus mycoides DSM 2048] Length = 980 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 55/216 (25%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D V ++ + L + C C +C + ++G+ A Sbjct: 4 QTVRVTVDGKEFFVSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGSLLRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTKLEDGMHIERQSERAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMEIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + ++ R Sbjct: 124 QKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWSLDRP--RV 181 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ + D C + C CP Sbjct: 182 IWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|212696067|ref|ZP_03304195.1| hypothetical protein ANHYDRO_00603 [Anaerococcus hydrogenalis DSM 7454] gi|212676696|gb|EEB36303.1| hypothetical protein ANHYDRO_00603 [Anaerococcus hydrogenalis DSM 7454] Length = 1176 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 22/98 (22%), Gaps = 13/98 (13%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 P K + + C+ C CS CP +L Sbjct: 665 EPGTTKYEKRGIALNVPEWQIDNCIQCNQCSYVCP--HAVIRPFLVTEDEKANA-----P 717 Query: 207 RDEFQGERLDNLEDPFRLY------RCHTIMNCTQSCP 238 + + D + C NC CP Sbjct: 718 EGFETKKAIGKGMDGYDFRIQISPLDCTGCGNCADVCP 755 >gi|212550599|ref|YP_002308916.1| hydrogenase 4Fe-4S binding subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548837|dbj|BAG83505.1| putative hydrogenase 4Fe-4S binding subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 267 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + + C+ C C +CP + + + + +W+ ++ + Sbjct: 149 FWQNEMKNCIRCYACRQACPLCYCSQC-----VVEINQPQWIPVFANKIGNTEWHIMRAM 203 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C + CP+ + ++ + Sbjct: 204 HLAGRCVECGQCGRVCPENIPIHLLPIRLAREI 236 >gi|21232095|ref|NP_638012.1| formate dehydrogenase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767778|ref|YP_242540.1| formate dehydrogenase related protein [Xanthomonas campestris pv. campestris str. 8004] gi|188990892|ref|YP_001902902.1| formate dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|21113840|gb|AAM41936.1| formate dehydrogenase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573110|gb|AAY48520.1| formate dehydrogenase related protein [Xanthomonas campestris pv. campestris str. 8004] gi|167732652|emb|CAP50846.1| formate dehydrogenase [Xanthomonas campestris pv. campestris] Length = 990 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 19/113 (16%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + F I+ + P +C++C C +C Sbjct: 111 CTLHNTFADMKMPIQRYAFQRKPYEKDHSNPF-----YTYDPDQCILCGRCVEACQKVEV 165 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + L ++ R L D P C + +C CP Sbjct: 166 --NETLSIDFSMEHPRVLWDG------------GKPINASSCVSCGHCVTVCP 204 >gi|21243424|ref|NP_643006.1| NADH dehydrogenase subunit I [Xanthomonas axonopodis pv. citri str. 306] gi|78048401|ref|YP_364576.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|289667371|ref|ZP_06488446.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294624670|ref|ZP_06703340.1| NADH dehydrogenase subunit I [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666769|ref|ZP_06732003.1| NADH dehydrogenase subunit I [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325924683|ref|ZP_08186121.1| NADH dehydrogenase subunit I [Xanthomonas perforans 91-118] gi|81860560|sp|Q8PJ48|NUOI_XANAC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|115502547|sp|Q3BRN7|NUOI_XANC5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21108976|gb|AAM37542.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas axonopodis pv. citri str. 306] gi|78036831|emb|CAJ24524.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292601026|gb|EFF45093.1| NADH dehydrogenase subunit I [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603430|gb|EFF46847.1| NADH dehydrogenase subunit I [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544889|gb|EGD16234.1| NADH dehydrogenase subunit I [Xanthomonas perforans 91-118] Length = 162 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 37 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 96 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 97 ID------------------LFKCIFCGFCEESCPVD 115 >gi|114048627|ref|YP_739177.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113890069|gb|ABI44120.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 476 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +R E +G R + Sbjct: 216 AICTYLNAGWMREQMCLHCCPYARFQAVMFDANTKTVTYDA----ARGEARGPRKRKQQT 271 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 272 E--LGDCVDCNLCVEVCPTGIDI 292 >gi|320106211|ref|YP_004181801.1| NADH-quinone oxidoreductase subunit I [Terriglobus saanensis SP1PR4] gi|319924732|gb|ADV81807.1| NADH-quinone oxidoreductase, chain I [Terriglobus saanensis SP1PR4] Length = 167 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 K + H+ ++ +GL +CV C C+ +CPS Y+ A + R Sbjct: 36 PMRGAKFQERFRGKHQLQRDENGLEKCVACFLCAAACPSNCI----YIEAAENTEEVRI- 90 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 ER + + RC C ++CP AI Sbjct: 91 ------SSAERYAKVYNIDY-NRCIFCGYCVEACP-----TDAITH 124 >gi|257452067|ref|ZP_05617366.1| anaerobic sulfite reductase subunit A [Fusobacterium sp. 3_1_5R] gi|317058615|ref|ZP_07923100.1| anaerobic sulfite reductase subunit A [Fusobacterium sp. 3_1_5R] gi|313684291|gb|EFS21126.1| anaerobic sulfite reductase subunit A [Fusobacterium sp. 3_1_5R] Length = 335 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 24/147 (16%) Query: 135 QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS--------YWWN 186 ++ ++ + + + C+ C C+ +CP+ ++ Sbjct: 186 NIDFVKENKFSIEVPENIDFMHLQSHSMWDEYDTRCIACGRCNFTCPTCTCFSMQDIYYR 245 Query: 187 SDRYLGPAILLQA------YRWLIDSRDEFQGE----RLDNLEDPF------RLYRCHTI 230 ++ +G + A Y + + R L C Sbjct: 246 ENQNVGERRRVWASCQVDGYTRIAGGHSFRNKQGQRMRFKTLHKIHDFKKRFGYNMCVGC 305 Query: 231 MNCTQSCPKGLNPAKAIAKIKMMLLDR 257 C +CP+ ++ ++AI K+K + ++ Sbjct: 306 GRCDDACPQYISFSEAITKVKNAMDEK 332 >gi|209731956|gb|ACI66847.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L MS+ + +I + + H R+ +G C+ C Sbjct: 59 LLWTELFRGLGTTMSYLLREPATINYPFEKG--PLSPRFRGEHALRRYPNGEERCIACKL 116 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 117 CEAVCPAQAITIEAETRADGSRRTTRYDIDMT------------------KCIYCGFCQE 158 Query: 236 SCPKG 240 +CP Sbjct: 159 ACPVD 163 >gi|119476273|ref|ZP_01616624.1| putative glutamate synthase small subunit [marine gamma proteobacterium HTCC2143] gi|119450137|gb|EAW31372.1| putative glutamate synthase small subunit [marine gamma proteobacterium HTCC2143] Length = 604 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 12/87 (13%) Query: 160 DRQKIDGLYECVMCACCSTSCPS-----YWWNSDRYLGPAILLQAYRWLID---SRDEFQ 211 D Q + +C+ C C CP+ ++ L + A D S D+ Sbjct: 495 DAQTVFTEAKCIECDACVDICPTDCITFTHSGTEAELRTRLSAPANNLDQDLYISTDKLP 554 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCP 238 R+ ++D C C + CP Sbjct: 555 TGRI-MVKDENV---CLHCGLCAERCP 577 >gi|119472464|ref|ZP_01614563.1| putative iron-sulfur cluster-binding protein FixG [Alteromonadales bacterium TW-7] gi|119444901|gb|EAW26200.1| putative iron-sulfur cluster-binding protein FixG [Alteromonadales bacterium TW-7] Length = 459 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE- 219 G + C+ +CP + S + +++ R E +G R + Sbjct: 197 AGCTYGNAGFLREKMCTIACPYSRFQSVMFDKDTLVVTYDA----ERGENRGPRKRKADP 252 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 253 KSLNLGDCVDCNLCVEVCPAGIDI 276 >gi|119472786|ref|ZP_01614723.1| hypothetical protein ATW7_17552 [Alteromonadales bacterium TW-7] gi|119444745|gb|EAW26050.1| hypothetical protein ATW7_17552 [Alteromonadales bacterium TW-7] Length = 476 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 5/84 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 G + C CP + S + + +SR E +G R + Sbjct: 211 AVCTYGNAGWMREIMCLHICPYSRFQSAMFDKDTYTVT----YDESRGESRGPRSRKVAH 266 Query: 221 PF-RLYRCHTIMNCTQSCPKGLNP 243 + C C Q CP G++ Sbjct: 267 ADLEIGDCIDCNLCVQVCPTGIDI 290 >gi|86739259|ref|YP_479659.1| NADH dehydrogenase subunit I [Frankia sp. CcI3] gi|110287761|sp|Q2JFL2|NUOI_FRASC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|86566121|gb|ABD09930.1| NADH dehydrogenase subunit I [Frankia sp. CcI3] Length = 217 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 K V + + + A H+ + DGL +CV C C+ +CP+ Sbjct: 8 KGFGVTFGTMFK--KPTTEQYPEEKKETAPRFHGRHQLNRHPDGLEKCVGCELCAWACPA 65 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A +A R+ GER + L RC C ++CP Sbjct: 66 ----DAIYVEGADNTEAERYSP-------GERYGRVYQINYL-RCILCGLCIEACP 109 >gi|319955925|ref|YP_004167188.1| NADH dehydrogenase subunit i [Nitratifractor salsuginis DSM 16511] gi|319418329|gb|ADV45439.1| NADH dehydrogenase subunit I [Nitratifractor salsuginis DSM 16511] Length = 207 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 19/107 (17%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYL 191 F + +I+ + P + R G Y C+ C C C + D Sbjct: 60 FMGEMHTIK-YPFEKLPIAPRYRAIHEMKRLLESGHYRCIGCGLCEKICIANCIRIDT-- 116 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R+ + R E L+ RC C + CP Sbjct: 117 ---------RYDENQRKEVSEYTLN-------FGRCIFCGYCAEVCP 147 >gi|270296499|ref|ZP_06202699.1| aldo/keto reductase [Bacteroides sp. D20] gi|270273903|gb|EFA19765.1| aldo/keto reductase [Bacteroides sp. D20] Length = 467 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M H R+ P + + LL+ R C C C CP Sbjct: 326 MTYMEHLQDNLRTFSPLVP--CTEEEFTLLEDTAQRMLQYPTVPCNDCKYCMP-CPYGLD 382 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 L + +S+DE + R L R RC C C Sbjct: 383 IPAILLHYNRCINEGNVPQNSQDENYREARRAFLIGYDRSVPRLRQANRCTGCGQCNPHC 442 Query: 238 PKGLNPAKAIAKI 250 P+G++ + +I Sbjct: 443 PQGIDIPAKLQEI 455 >gi|170757766|ref|YP_001782227.1| hypothetical protein CLD_1953 [Clostridium botulinum B1 str. Okra] gi|169122978|gb|ACA46814.1| cysteine-rich domain protein [Clostridium botulinum B1 str. Okra] Length = 381 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 Y C C + CPK LN AKA +++ +++ Sbjct: 63 YSCAICGKCREVCPKDLNMAKAFMDLRVETVEQ 95 >gi|71275682|ref|ZP_00651967.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Dixon] gi|71897774|ref|ZP_00680000.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Ann-1] gi|71897862|ref|ZP_00680088.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Ann-1] gi|170729497|ref|YP_001774930.1| NADH dehydrogenase subunit I [Xylella fastidiosa M12] gi|182680813|ref|YP_001828973.1| NADH dehydrogenase subunit I [Xylella fastidiosa M23] gi|71163573|gb|EAO13290.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Dixon] gi|71732329|gb|EAO34383.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Ann-1] gi|71732417|gb|EAO34471.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa Ann-1] gi|167964290|gb|ACA11300.1| NADH dehydrogenase [Xylella fastidiosa M12] gi|182630923|gb|ACB91699.1| NADH-quinone oxidoreductase, chain I [Xylella fastidiosa M23] Length = 162 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 37 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 96 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 97 ID------------------LFKCIFCGFCEESCPVD 115 >gi|301052239|ref|YP_003790450.1| formate dehydrogenase subunit alpha [Bacillus anthracis CI] gi|300374408|gb|ADK03312.1| formate dehydrogenase, alpha subunit, anaerobic [Bacillus cereus biovar anthracis str. CI] Length = 978 Score = 42.1 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 52/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKGAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|225862561|ref|YP_002747939.1| molybdopterin oxidoreductase family protein [Bacillus cereus 03BB102] gi|229182920|ref|ZP_04310153.1| formate dehydrogenase [Bacillus cereus BGSC 6E1] gi|225788100|gb|ACO28317.1| molybdopterin oxidoreductase family protein [Bacillus cereus 03BB102] gi|228600544|gb|EEK58131.1| formate dehydrogenase [Bacillus cereus BGSC 6E1] Length = 978 Score = 42.1 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQAEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|167752661|ref|ZP_02424788.1| hypothetical protein ALIPUT_00917 [Alistipes putredinis DSM 17216] gi|167659730|gb|EDS03860.1| hypothetical protein ALIPUT_00917 [Alistipes putredinis DSM 17216] Length = 606 Score = 42.1 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 32/131 (24%), Gaps = 14/131 (10%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PL I + + +S++ I + + + K E C Sbjct: 218 YEPLWWAYSICLGLFFIVLPFSRYMHIFTEIPLIFLRRYKLHSTEKEGSFDRFQTDACSR 277 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C C + L+ R+ R C Sbjct: 278 CGICIDPCQLQSELGIDDVQSVYFLRDRRYN-HLRQSVAN-------------NCLMCGR 323 Query: 233 CTQSCPKGLNP 243 C Q CP G+ Sbjct: 324 CEQRCPVGIEL 334 >gi|89893619|ref|YP_517106.1| hypothetical protein DSY0873 [Desulfitobacterium hafniense Y51] gi|89333067|dbj|BAE82662.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 757 Score = 42.1 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 37/159 (23%), Gaps = 25/159 (15%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 + + P +V D Q ++ L + A+ Sbjct: 243 YIQTKSMSGQPETFIEDEPRFTVAID------RNSRQIIPLKNDLYDIDETIAESKRCIM 296 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 D C C C + + + ER+ Sbjct: 297 CD------------CTACMDGCDFLKSMGMYPKELEDHVLSAVNMPH---AAFVERV--- 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 ++ C +C CP+G++ + K L Sbjct: 339 -GSRTIFSCSVCGHCQSVCPRGISLENLLLDCKKSLFKA 376 >gi|328954390|ref|YP_004371724.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacca acetoxidans DSM 11109] gi|328454714|gb|AEB10543.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacca acetoxidans DSM 11109] Length = 545 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 12/97 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 R CV C C+ C + D P + + R + + G+ L L Sbjct: 83 RSLKLFFDICVRCGACADKCHFFLGTGDPKNMPVMRAELMRSVYRRYFKTAGKVLGELAG 142 Query: 221 P------------FRLYRCHTIMNCTQSCPKGLNPAK 245 F L++C C+ CP G++ A+ Sbjct: 143 ARDLTEDVLKEWFFYLHQCTICRRCSVFCPYGIDMAE 179 >gi|253701642|ref|YP_003022831.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251776492|gb|ACT19073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 407 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 20/76 (26%), Gaps = 20/76 (26%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 V + C T CP R E DP R C Sbjct: 175 FVRRSFCKTVCPYGRIQLMTM---------------ERGTLTLEF-----DPARKDACLR 214 Query: 230 IMNCTQSCPKGLNPAK 245 C ++CP G++ Sbjct: 215 CGACVRACPMGIDIRD 230 >gi|121702465|ref|XP_001269497.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus clavatus NRRL 1] gi|119397640|gb|EAW08071.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus clavatus NRRL 1] Length = 228 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + V M F+ + + H R+ G C+ C C Sbjct: 81 ELFRGMYVVMEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEAI 138 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 139 CPAQAITIEAEEREDGSRRTTRYDIDMT------------------KCIYCGYCQESCPV 180 Query: 240 G 240 Sbjct: 181 D 181 >gi|113969230|ref|YP_733023.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113883914|gb|ABI37966.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 476 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +R E +G R + Sbjct: 216 AICTYLNAGWMREQMCLHCCPYARFQAVMFDANTKTVTYDA----ARGEARGPRKRKQQT 271 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C + CP G++ Sbjct: 272 E--LGDCVDCNLCVEVCPTGIDI 292 >gi|317401996|gb|EFV82596.1| NADH-quinone oxidoreductase subunit I [Achromobacter xylosoxidans C54] Length = 162 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + +F+ R + + H R+ +G C+ C C Sbjct: 15 ELLKGMRLTGKYFFK--RKVTLRYPQEKTPTSARFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + D RD+ D L +C C +SCP Sbjct: 73 CPALAITIES---------------DQRDDGTRRTTRYDID---LTKCIFCGFCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|218555264|ref|YP_002388177.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli IAI1] gi|300815876|ref|ZP_07096100.1| hydrogenase 4 subunit H [Escherichia coli MS 107-1] gi|218362032|emb|CAQ99639.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli IAI1] gi|300531805|gb|EFK52867.1| hydrogenase 4 subunit H [Escherichia coli MS 107-1] Length = 180 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVEA------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|196046780|ref|ZP_03114002.1| molybdopterin oxidoreductase family protein [Bacillus cereus 03BB108] gi|196022315|gb|EDX61000.1| molybdopterin oxidoreductase family protein [Bacillus cereus 03BB108] Length = 978 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 4 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 63 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 64 CSTQIENGMHIERQSQRAKEAQAEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 123 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 124 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 174 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 175 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 205 >gi|160933601|ref|ZP_02080989.1| hypothetical protein CLOLEP_02455 [Clostridium leptum DSM 753] gi|156867478|gb|EDO60850.1| hypothetical protein CLOLEP_02455 [Clostridium leptum DSM 753] Length = 1188 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 50/209 (23%), Gaps = 14/209 (6%) Query: 30 YRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCG 89 ++I P+ M + + + + I+ ++ Sbjct: 567 FKIANIIPEADAVQYMKDAATKSYSKKGEKIVAMNHAA--IERGVSDVHKVEVPASWKDA 624 Query: 90 MNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 D + + + + P+ K L V + T Sbjct: 625 CACDEKKLVTTDRKDLEQYVNNVLNPVNAYQGNK-LPVST--------FMPHVDGTAPQG 675 Query: 150 PAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDE 209 + + C+ C CS CP A L A S+D Sbjct: 676 SSAFEKRGIAVDVPEWNPQNCIQCNFCSYVCPHAVIRPVAM--TADELAAAPEGTKSKDM 733 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + L C +C Q CP Sbjct: 734 TGVPGMKFVMTISTL-DCTGCGSCAQVCP 761 >gi|153864316|ref|ZP_01997257.1| oxidoreductase [Beggiatoa sp. SS] gi|152146186|gb|EDN72740.1| oxidoreductase [Beggiatoa sp. SS] Length = 246 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAILLQAYRWLID 205 + +D +C C T CPSY + Y ++ Sbjct: 19 QTQFDWQKDLGLKAAAEKCNGSGVCRKSVGRGTMCPSYMATKEEYYSTRGRSNLLIQALN 78 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 S + + + L L C + C CP ++ +A++K L Sbjct: 79 SANPIEEFASEEL--KKTLDLCLSCKACKSECPANVD----MARLKSEFL 122 >gi|84624716|ref|YP_452088.1| NADH dehydrogenase subunit I [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577688|ref|YP_001914617.1| NADH dehydrogenase subunit I [Xanthomonas oryzae pv. oryzae PXO99A] gi|115502548|sp|Q2P0W3|NUOI_XANOM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|84368656|dbj|BAE69814.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522140|gb|ACD60085.1| NADH-quinone oxidoreductase chain 9 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 162 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 37 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 96 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 97 ID------------------LFKCIFCGFCEESCPVD 115 >gi|327291045|ref|XP_003230232.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [Anolis carolinensis] Length = 208 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L +I+ L + MS+ + + +I + + H R+ G C+ C Sbjct: 57 LLWTELIRGLAMTMSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 114 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 115 CEAICPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFCQE 156 Query: 236 SCPKG 240 +CP Sbjct: 157 ACPVD 161 >gi|167042651|gb|ABZ07372.1| putative 4Fe-4S binding domain protein [uncultured marine crenarchaeote HF4000_ANIW133M9] Length = 188 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Query: 168 YECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C +CP W+ +D+ + ++ + ERLD + + Sbjct: 70 DSCIADGACIEACPVQIFQWYRTDKDISGIDAVKDKTTWKGLGTTEKEERLDYTDKADAI 129 Query: 225 --YRCHTIMNCTQSCP 238 + C M C CP Sbjct: 130 REHDCIWCMACVSVCP 145 >gi|78224539|ref|YP_386286.1| NADH dehydrogenase I subunit G [Geobacter metallireducens GS-15] gi|78195794|gb|ABB33561.1| NADH dehydrogenase I, G subunit, putative [Geobacter metallireducens GS-15] Length = 828 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 37/175 (21%), Gaps = 31/175 (17%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL-----------PHMSVIKDLVVD 128 +C + G AC + + + P + D V Sbjct: 43 GGCRMCLVEVEQMKGRQIPACTTPVTEGMIVNTMTPEIIQARKLVLELLLLKHPIDCPVC 102 Query: 129 M---SHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + +++ + CV C C+ C Sbjct: 103 DAAGDCDLQNLTYEYQVNSNRFKDEKFQHQIDYQNPLIERDMNRCVHCGKCARICDEIVS 162 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 AY ++ + G D C +C CP G Sbjct: 163 FG-----------AYTFINRGLEAKIGTEFD------GPLNCEFCGSCVSVCPVG 200 >gi|57168998|ref|ZP_00368127.1| conserved hypothetical protein [Campylobacter coli RM2228] gi|57019664|gb|EAL56353.1| conserved hypothetical protein [Campylobacter coli RM2228] Length = 357 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 4/121 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E RI+R++ Y V + L LL D ++ + I + Sbjct: 5 ELRIFRFDKQKDYEAYYKPY-VYNNYENFATLYDLLLQVQNDDIYFDFEKNDKSYIVVNK 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 T +K + + PL +KDL+++ F + + + P+ Sbjct: 64 EFLPLNTPL---DILVKKYDFNLIIEPLSTKRSVKDLIINKDDFLEKFKYLAPFANEEDK 120 Query: 149 K 149 K Sbjct: 121 K 121 >gi|318604975|emb|CBY26473.1| formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit [Yersinia enterocolitica subsp. palearctica Y11] Length = 195 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 23/76 (30%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + D +G R L Sbjct: 33 PQYDAEQCIACGACTMACPANALTMET------------------DFAKGTRQWQLF--- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|308233843|ref|ZP_07664580.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Atopobium vaginae DSM 15829] Length = 953 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 22/82 (26%), Gaps = 5/82 (6%) Query: 161 RQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 +C+ C CS CP + + A R + G + Sbjct: 462 MVPHWDETKCIQCNNCSFVCPHSTIRPIAMTEAEAAAAPAQMRMIDAKGKGADGLKFAIA 521 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 P C NC CPK Sbjct: 522 VSPL---DCMGCTNCVYVCPKD 540 >gi|305432251|ref|ZP_07401414.1| conserved hypothetical protein [Campylobacter coli JV20] gi|304444599|gb|EFM37249.1| conserved hypothetical protein [Campylobacter coli JV20] Length = 357 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 4/121 (3%) Query: 29 EYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSC 88 E RI+R++ Y V + L LL D ++ + I + Sbjct: 5 ELRIFRFDKQKDYEAYYKPY-VYNNYENFATLYDLLLQVQNDDIYFDFEKNDKSYIVVNK 63 Query: 89 GMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 T +K + + PL +KDL+++ F + + + P+ Sbjct: 64 EFLPLNTPL---DILVKKYDFNLIIEPLSTKRSVKDLIINKDDFLEKFKYLAPFANEEDK 120 Query: 149 K 149 K Sbjct: 121 K 121 >gi|224538464|ref|ZP_03679003.1| hypothetical protein BACCELL_03358 [Bacteroides cellulosilyticus DSM 14838] gi|224519932|gb|EEF89037.1| hypothetical protein BACCELL_03358 [Bacteroides cellulosilyticus DSM 14838] Length = 768 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 60/216 (27%), Gaps = 38/216 (17%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + I G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITIGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + E +K Sbjct: 244 ---GHQVDFDEMLKRMGAFKSIEREEMHKLEEDESCKAAPEPTQEVDEKSRNAAW----- 295 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD------EFQGERLDNLEDPFRLY--- 225 + + P R ++ D + E L + L Sbjct: 296 ---------RLELRKAMKPKERTAIPRVEMNELDPEYRSHSRKEEVNQGLTEEQALTEAK 346 Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKI-KMMLLDRK 258 RC N C + CP G++ + I I + +L+ Sbjct: 347 RCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAA 382 >gi|148379479|ref|YP_001254020.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A str. ATCC 3502] gi|153932468|ref|YP_001383856.1| aldo/keto reductase family oxidoreductase [Clostridium botulinum A str. ATCC 19397] gi|153935212|ref|YP_001387406.1| aldo/keto reductase family oxidoreductase [Clostridium botulinum A str. Hall] gi|148288963|emb|CAL83050.1| putative oxidoreductase [Clostridium botulinum A str. ATCC 3502] gi|152928512|gb|ABS34012.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A str. ATCC 19397] gi|152931126|gb|ABS36625.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A str. Hall] Length = 378 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 10/136 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + +M H + + + EL+ ++ +C C C Sbjct: 245 PEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNPAKAIAKI 250 ++CP+ + + ++ Sbjct: 357 EACPQNIKIRNMLEEV 372 >gi|118476276|ref|YP_893427.1| formate dehydrogenase, subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|118415501|gb|ABK83920.1| formate dehydrogenase, alpha subunit [Bacillus thuringiensis str. Al Hakam] Length = 986 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 37/216 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCRE------GICGSCGMNIDGTNTLA 99 T V +D ++ + L + C C +C + +DG A Sbjct: 12 QTVRVTVDGKEFSASGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVDGKLMRA 71 Query: 100 CVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146 C K+ + L + + + + + H ++ Sbjct: 72 CSTQIENGMHIERQSQRAKEAQAEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMGIEE 131 Query: 147 S----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 +C+ C C C + N + W Sbjct: 132 QKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISID---------W 182 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +D R + ++ D C + C CP Sbjct: 183 SLD-RPRVIWDHGVSINDS----SCVSCGQCVTVCP 213 >gi|150375768|ref|YP_001312364.1| molybdopterin oxidoreductase [Sinorhizobium medicae WSM419] gi|150030315|gb|ABR62431.1| molybdopterin oxidoreductase [Sinorhizobium medicae WSM419] Length = 850 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 56/213 (26%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKD 103 T V+ G VL + +I +R C C + I+G L AC Sbjct: 9 QTLEVEA---GSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATV 65 Query: 104 MKDIKGAIAVYPL--PHMSVIKDL----------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 D PL + + D+ + D + + S Sbjct: 66 AADGMAVRTNTPLIEETRASMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + +D + I + C+ C C C + A + Sbjct: 126 PKRVFHSKDIRLSPVIIMNVNRCIQCQRCVRMCEEV-----------VGAVALGTVEKGM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|13540950|ref|NP_110638.1| ferredoxin [Thermoplasma volcanium GSS1] Length = 140 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 34/126 (26%), Gaps = 14/126 (11%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 YP+ D V +P+ + + C+ Sbjct: 22 YPITGQHNNHD--VRAEGMQRMDADGKPYPTKLGIHGTHVAVDWDC----------CIAD 69 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP + + G + + S DE+ R D DP R C M C Sbjct: 70 GACMDVCPVNLYEWNLNPGKSGTGNDKKVEKGS-DEWNKYRTDK-CDPVRESDCIFCMAC 127 Query: 234 TQSCPK 239 CP Sbjct: 128 ESVCPV 133 >gi|320165166|gb|EFW42065.1| mitochondrial NADH:ubiquinone oxidoreductase complex I [Capsaspora owczarzaki ATCC 30864] Length = 230 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + +F+ ++ + + H R+ G C+ C C Sbjct: 83 ELFGGMRLTLDYFFRPKATLHYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCEAI 140 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID L +C C ++CP Sbjct: 141 CPAMAITIEAEPRADGSRRTTRYDID------------------LTKCIYCGFCQEACPV 182 Query: 240 G 240 Sbjct: 183 D 183 >gi|300087353|ref|YP_003757875.1| formate dehydrogenase subunit alpha [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527086|gb|ADJ25554.1| formate dehydrogenase, alpha subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 886 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 24/91 (26%), Gaps = 14/91 (15%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 P + C++CA C+ +C N L DSR Sbjct: 124 PPSTPTRPIDDSNPFFRLDRAYCILCARCTRACDEITGNGAIELTGRGY--------DSR 175 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +R D C + C CP Sbjct: 176 VGTVADRPLAETD------CRSCGECVARCP 200 >gi|156934234|ref|YP_001438150.1| formate hydrogenlyase complex iron-sulfur subunit [Cronobacter sakazakii ATCC BAA-894] gi|156532488|gb|ABU77314.1| hypothetical protein ESA_02064 [Cronobacter sakazakii ATCC BAA-894] Length = 180 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L D L+ F L RC Sbjct: 39 QCIGCAACINACPSNALTVETDLQH----------------------DRLDWQFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|282165123|ref|YP_003357508.1| coenzyme F420 hydrogenase subunit gamma [Methanocella paludicola SANAE] gi|282157437|dbj|BAI62525.1| coenzyme F420 hydrogenase subunit gamma [Methanocella paludicola SANAE] Length = 235 Score = 41.7 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 28/87 (32%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C+ +CP+ +++ R ER C Sbjct: 176 CIGCGACAMACPTRAIT----------------MVEGRPNNVFER------------CVK 207 Query: 230 IMNCTQSCPKGLNPAKAIAKIKMMLLD 256 C CP+ P AI K+ L++ Sbjct: 208 CGACYAQCPRSFLPTAAIEKLMDRLME 234 >gi|46446201|ref|YP_007566.1| NADH-ubiquinone oxidoreductase chain I [Candidatus Protochlamydia amoebophila UWE25] gi|46399842|emb|CAF23291.1| probable NADH-ubiquinone oxidoreductase chain I [Candidatus Protochlamydia amoebophila UWE25] Length = 143 Score = 41.7 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 12/78 (15%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 DGL CV C C+ CP+ Y+ PA GER + Sbjct: 37 WNDGLERCVGCELCAIVCPAQAI----YVKPAANEP-------GHIHSHGERYASDFQIN 85 Query: 223 RLYRCHTIMNCTQSCPKG 240 L RC C ++CP G Sbjct: 86 ML-RCIFCGYCEEACPTG 102 >gi|319950459|ref|ZP_08024373.1| NADH dehydrogenase subunit I [Dietzia cinnamea P4] gi|319435882|gb|EFV91088.1| NADH dehydrogenase subunit I [Dietzia cinnamea P4] Length = 186 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 20/126 (15%) Query: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVM 172 + PL V + + + + E + + P + + +R DGL +C+ Sbjct: 8 LEPLAGFGV------TFATMFRK-KHTEQYPEEKVPTAPRYHGRHQLNR-YADGLEKCIG 59 Query: 173 CACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 C C+ +CP+ Y+ A R+ GER + L RC Sbjct: 60 CELCAWACPA----DAIYVEGADNTAEERFSP-------GERYGRIYQINYL-RCIGCGL 107 Query: 233 CTQSCP 238 C ++CP Sbjct: 108 CVEACP 113 >gi|315125837|ref|YP_004067840.1| hypothetical protein PSM_A0741 [Pseudoalteromonas sp. SM9913] gi|315014351|gb|ADT67689.1| hypothetical protein PSM_A0741 [Pseudoalteromonas sp. SM9913] Length = 476 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 5/70 (7%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF-RLYRCHTIMNC 233 C CP + S + + ++R E +G R + L C C Sbjct: 225 MCLHICPYSRFQSAMFDKDTFTVS----YDETRGENRGPRSRKQDPKELGLGDCIDCNLC 280 Query: 234 TQSCPKGLNP 243 Q CP G++ Sbjct: 281 VQVCPTGIDI 290 >gi|296132264|ref|YP_003639511.1| molybdopterin oxidoreductase [Thermincola sp. JR] gi|296030842|gb|ADG81610.1| molybdopterin oxidoreductase [Thermincola potens JR] Length = 352 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 27/105 (25%), Gaps = 14/105 (13%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + K+ + +C++C C C D G + Sbjct: 114 YAYYYGIRKSSFEGERHNDPVDDSSAVILRDTNKCILCGKCVRVC-------DEIQGRHV 166 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L YR F + + C + +C CP G Sbjct: 167 LDFMYR-------GFNTKVGPAFNEGMGDSECVSCGSCVAVCPVG 204 >gi|270297046|ref|ZP_06203245.1| NADH:ubiquinone oxidoreductase [Bacteroides sp. D20] gi|270273033|gb|EFA18896.1| NADH:ubiquinone oxidoreductase [Bacteroides sp. D20] Length = 588 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 36/174 (20%), Gaps = 30/174 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFY----- 133 C C + ++G LA + + + + V+ +L++ Sbjct: 52 ASCRICVVEVEGRRNLAPACATRCTEEMVVRTSTLRVMNARKVVAELILSDHPNDCLTCP 111 Query: 134 -------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + + +C+ C C + C Sbjct: 112 KCGNCELQTLALRFNIRTMPFNGGELSPRKREVTSSIVRNMDKCIFCRRCESVCNDVQTV 171 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D + D C C CP G Sbjct: 172 GALGAIRRGFNTTIAPAFD----------KMMTDSE----CTYCGQCVAVCPVG 211 >gi|226941015|ref|YP_002796089.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] gi|226715942|gb|ACO75080.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] Length = 463 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 8/76 (10%) Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 A C CP + ++ QA R R + + C C Sbjct: 216 AVCQHMCPYARFQG------VMVDQATRNAGYDRQRGEPRHVRRQAGEQG--SCIDCGIC 267 Query: 234 TQSCPKGLNPAKAIAK 249 Q+CP G++ + Sbjct: 268 VQACPVGIDIRDGLQY 283 >gi|218886693|ref|YP_002436014.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757647|gb|ACL08546.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 207 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 5/77 (6%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR-- 226 +C+ C C ++CPS R P + + + ++ + + + Sbjct: 64 KCIACMLCVSACPSNCITVTRAPTPKPTPEELKAMAEAEARGEKPKKPAPPKAPGTWTYD 123 Query: 227 ---CHTIMNCTQSCPKG 240 C +C ++CP Sbjct: 124 FSLCSLCGSCVEACPVD 140 >gi|157779397|gb|ABV71241.1| soluble [NiFe] hydrogenase diaphorase beta subunit [Thermococcus litoralis DSM 5473] Length = 334 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 20/112 (17%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS--DRYLGPAILLQAYRW---------LIDSRDEFQ 211 C+ C C+ CP+ D ++ ++ R+ L+ F+ Sbjct: 222 WKKYEKICLGCGNCNMVCPTCRCYEVCDLWMNAYEAVRVRRYDSCFMETHGLVAGGHNFR 281 Query: 212 GERLDNLE---------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RLD DP + C C + CP + K + +++ L Sbjct: 282 PTRLDRFRHRYYCKSYFDPSAGFNCVGCGRCDEFCPAKIEHVKVLDEVREGL 333 >gi|77416915|gb|ABA81853.1| NADH:ubiquinone oxidoreductase-like [Solanum tuberosum] Length = 229 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 24/123 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L++ + +F+ + +I + + H R+ G C+ C C Sbjct: 82 EMVRGLMLTLKYFFEKKVTINYPFEKG--PLSPRFRGEHALRRYATGEERCIACKLCEAI 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 140 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 179 Query: 238 PKG 240 P Sbjct: 180 PVD 182 >gi|75908927|ref|YP_323223.1| NADH dehydrogenase subunit I [Anabaena variabilis ATCC 29413] gi|110287695|sp|Q3M9K8|NDHI_ANAVT RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|75702652|gb|ABA22328.1| NADH-plastoquinone oxidoreductase, subunit I [Anabaena variabilis ATCC 29413] Length = 194 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L V H + +++ + + P +E +C+ C C Sbjct: 19 GRYIGQGLSVTFDHMRRRPVTVQYPYEKLIPGERFRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W D + ++L++ F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WEFDK--ATKKKKLNHYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|55742238|ref|NP_001006930.1| NADH dehydrogenase ubiquinone Fe-S 8 [Xenopus (Silurana) tropicalis] gi|50416643|gb|AAH77660.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus (Silurana) tropicalis] gi|89271932|emb|CAJ82191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus (Silurana) tropicalis] Length = 209 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L + + L + +S+ + + +I + + H R+ G C+ C Sbjct: 58 LLWTELFRGLGMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 115 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 116 CEAVCPAQAITIEAEPRTDGSRRTTRYDIDMT------------------KCIYCGFCQE 157 Query: 236 SCPKG 240 +CP Sbjct: 158 ACPVD 162 >gi|163938512|ref|YP_001643396.1| formate dehydrogenase, alpha subunit [Bacillus weihenstephanensis KBAB4] gi|163860709|gb|ABY41768.1| formate dehydrogenase, alpha subunit [Bacillus weihenstephanensis KBAB4] Length = 980 Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 44/173 (25%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + ++G+ AC K+ + L + + + + Sbjct: 47 QTCDTCIVEVNGSLLRACSTKLEDGMYIERQSERAKEAQTEAMDRILENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 107 NGNCKVHNTVHMMEIEEQKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + ++ R + D+ + D C + C CP Sbjct: 167 NETLSIDWSLDRP--RVIWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|229131527|ref|ZP_04260415.1| formate dehydrogenase [Bacillus cereus BDRD-ST196] gi|228651927|gb|EEL07876.1| formate dehydrogenase [Bacillus cereus BDRD-ST196] Length = 980 Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 44/173 (25%), Gaps = 31/173 (17%) Query: 83 GICGSCGMNIDGTNTLACVK-------------DMKDIKGAIAVYPLPHMSVIKDLVVDM 129 C +C + ++G+ AC K+ + L + + + + Sbjct: 47 QTCDTCIVEVNGSLLRACSTKLEDGMHIERQSERAKEAQTEAMDRILENHLLYCTVCDNN 106 Query: 130 SHFYSQHRSIEPWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + H ++ +C+ C C C + Sbjct: 107 NGNCKVHNTVHMMEIEEQKYPYEPKVSACEVDTSHPFYRYDPNQCIACGQCVEVCQNLQV 166 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 N + ++ R + D+ + D C + C CP Sbjct: 167 NETLSIDWSLDRP--RVIWDNGVS--------INDS----SCVSCGQCVTVCP 205 >gi|197121272|ref|YP_002133223.1| FAD linked oxidase [Anaeromyxobacter sp. K] gi|196171121|gb|ACG72094.1| FAD linked oxidase domain protein [Anaeromyxobacter sp. K] Length = 1052 Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 21/81 (25%), Gaps = 7/81 (8%) Query: 167 LYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 CV C CPSY + L+ G R + D Sbjct: 590 AARCVGVGECRRDEGGVMCPSYRVTREEKHSTRGRAHLLHELMLGDPLRGGWRSAEVADA 649 Query: 222 FRLYRCHTIMNCTQSCPKGLN 242 L C C CP ++ Sbjct: 650 LHL--CLACKGCKSDCPMNVD 668 >gi|160900604|ref|YP_001566186.1| NADH dehydrogenase subunit I [Delftia acidovorans SPH-1] gi|160366188|gb|ABX37801.1| NADH-quinone oxidoreductase, chain I [Delftia acidovorans SPH-1] Length = 169 Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + + Sbjct: 33 YTFRRKVTVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPAMAITIESDVR 92 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 93 DDGSRRTTRYDID------------------LTKCIFCGFCEESCPVD 122 >gi|34496907|ref|NP_901122.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Chromobacterium violaceum ATCC 12472] gi|34102763|gb|AAQ59127.1| probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Chromobacterium violaceum ATCC 12472] Length = 468 Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 6/81 (7%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + + C CP + + +++ + R + Q + + Sbjct: 207 FTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLVISYDAKRGEPRGKTQAKSDAQTK--- 263 Query: 223 RLYRCHTIMNCTQSCPKGLNP 243 C C Q CP G++ Sbjct: 264 ---GCIDCGICVQVCPTGIDI 281 >gi|317178438|dbj|BAJ56226.1| NADH dehydrogenase subunit I [Helicobacter pylori F30] Length = 220 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|284167342|ref|YP_003405620.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulphur binding protein [Haloterrigena turkmenica DSM 5511] gi|284016997|gb|ADB62947.1| NADH:ubiquinone oxidoreductase, subunit G, iron- sulphur binding protein [Haloterrigena turkmenica DSM 5511] Length = 320 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 29/117 (24%), Gaps = 19/117 (16%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + +E V +C++C C +C L Sbjct: 151 QDVEEPRYGVRDDRDDYEPIDDSSSFIQIDRNKCILCNRCVEACNDVQVEG--VLRMEGS 208 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP------KGLNPAKAI 247 Q R S E E C + +C CP KG+ A I Sbjct: 209 GQDTRIGFQSDAETMEES-----------TCVSCGHCVTVCPTGSLVEKGIENATTI 254 >gi|312200059|ref|YP_004020120.1| NADH-quinone oxidoreductase chain I [Frankia sp. EuI1c] gi|311231395|gb|ADP84250.1| NADH-quinone oxidoreductase, chain I [Frankia sp. EuI1c] Length = 185 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 14/120 (11%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 K + + + + + A H+ + DGL +CV C C+ Sbjct: 4 FDFFKGFGLTFGNMFR--KPVTESYPEQKKPTAPRFHGRHQLNRHPDGLEKCVGCELCAW 61 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y+ A R+ GER + L RC C ++CP Sbjct: 62 ACPA----DAIYVEGADNTDEERFSP-------GERYGKVYQINYL-RCILCGLCIEACP 109 >gi|269102484|ref|ZP_06155181.1| anaerobic sulfite reductase subunit A [Photobacterium damselae subsp. damselae CIP 102761] gi|268162382|gb|EEZ40878.1| anaerobic sulfite reductase subunit A [Photobacterium damselae subsp. damselae CIP 102761] Length = 348 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 26/149 (17%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPS---- 182 + + Q I+ L +++ Q + D + C+ C C+TSCP+ Sbjct: 187 EYEPKFVQENQIKVRLPDQVCSDPQKIRQILQNDPSWAEYDRRCIGCGRCTTSCPTCSCY 246 Query: 183 ----YWWNSDRYLGPAILLQAYRWLID--------SRDEFQGERL-----DNLED----P 221 + ++ + G A + D S + GERL + D Sbjct: 247 SVFDFAYDENPTYGERRRQHASCMVGDFTAIAGGHSFRDKTGERLRFRALHKVNDYKARQ 306 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + C C CP+ ++ + I ++ Sbjct: 307 GTHHMCVGCGRCIDRCPQYISFTRIINRM 335 >gi|221632184|ref|YP_002521405.1| iron-sulfur cluster-binding protein [Thermomicrobium roseum DSM 5159] gi|221156600|gb|ACM05727.1| iron-sulfur cluster-binding protein [Thermomicrobium roseum DSM 5159] Length = 433 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%) Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 NL D L+ C T NC + CPK ++ + + + + Sbjct: 92 NLLDSPDLWLCTTCANCLRVCPKQVDMIQIMPAAREHAM 130 >gi|213161867|ref|ZP_03347577.1| sn-glycerol-3-phosphate dehydrogenase subunit C [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 344 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 5/29 (17%), Positives = 9/29 (31%) Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C +CP + I + + Sbjct: 3 YCINCKRCEVACPSDVKIGDIIQRARAKY 31 >gi|171680662|ref|XP_001905276.1| hypothetical protein [Podospora anserina S mat+] gi|170939958|emb|CAP65184.1| unnamed protein product [Podospora anserina S mat+] Length = 220 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ + V M F+ + + H R+ G C+ C C Sbjct: 73 EMMRGMYVLMEQFFRP--PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAV 130 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 131 CPAQAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQESCPV 172 Query: 240 G 240 Sbjct: 173 D 173 >gi|54611544|gb|AAH21616.2| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Mus musculus] Length = 212 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 20/127 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L +I+ L + +S+ + + +I + + H R+ G C+ C Sbjct: 59 RILMWTELIRGLGMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIAC 116 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP+ + + R+ ID +C C Sbjct: 117 KLCEAICPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFC 158 Query: 234 TQSCPKG 240 ++CP Sbjct: 159 QEACPVD 165 >gi|126451593|ref|YP_001067208.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei 1106a] gi|167846784|ref|ZP_02472292.1| formate dehydrogenase, alpha subunit [Burkholderia pseudomallei B7210] gi|242314359|ref|ZP_04813375.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 1106b] gi|126225235|gb|ABN88775.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 1106a] gi|242137598|gb|EES24000.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia pseudomallei 1106b] Length = 984 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 +C++C C +C + G L A R +SR + D Sbjct: 187 YFSYDPSKCIVCNRCVRAC-------EETQGTFALTIASR-GFESRVAASAC--EAFMDS 236 Query: 222 FRLYRCHTIMNCTQSCP 238 C + C +CP Sbjct: 237 E----CVSCGACVAACP 249 >gi|116619528|ref|YP_821684.1| aldo/keto reductase [Candidatus Solibacter usitatus Ellin6076] gi|116222690|gb|ABJ81399.1| aldo/keto reductase [Candidatus Solibacter usitatus Ellin6076] Length = 393 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 34/128 (26%), Gaps = 13/128 (10%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P++ + DM R+ + + + C MC C Sbjct: 267 PNIHTTVPSMTDMDQLDENIRAGVQAFSDSDARLLAAHRE-------LIRPIYCNMCGQC 319 Query: 177 STSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQS 236 CP D L A + Y R ER L RC CT Sbjct: 320 DGMCPKGLPVQDV-LRFATYAEGYGQFALGR-----ERFQELSAEHASVRCGECPECTVR 373 Query: 237 CPKGLNPA 244 CP G+ Sbjct: 374 CPHGVQVV 381 >gi|317011468|gb|ADU85215.1| NADH dehydrogenase subunit I [Helicobacter pylori SouthAfrica7] Length = 220 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 37/136 (27%), Gaps = 19/136 (13%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + + + K L + + F+S +I + P + H R Sbjct: 16 HSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRL 74 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 G C+ C C C S R + + + R Sbjct: 75 LDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDSYTI 116 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 117 NLGRCIYCGLCAEVCP 132 >gi|296533038|ref|ZP_06895684.1| oxidoreductase [Roseomonas cervicalis ATCC 49957] gi|296266624|gb|EFH12603.1| oxidoreductase [Roseomonas cervicalis ATCC 49957] Length = 971 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 168 YECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D R + + + + + Sbjct: 569 EMCNNNGTCRKFDANVMCPSYRVTRDEQHLTRGRANTLRLALTGQLGPDALAGEEVAEAL 628 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 L C + C + CP G++ AK Sbjct: 629 SL--CVSCKGCKRECPTGVDMAK 649 >gi|229490857|ref|ZP_04384692.1| NADH-quinone oxidoreductase subunit i [Rhodococcus erythropolis SK121] gi|229322247|gb|EEN88033.1| NADH-quinone oxidoreductase subunit i [Rhodococcus erythropolis SK121] Length = 185 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V +S + + + + A H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTLSTMFKKPET--EFYPEEKRPTAPGYHGRHQLNRYADGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A + R+ GER + L RC C ++CP Sbjct: 67 --DAIYVEGADNTEEERFSP-------GERYGRVYQINYL-RCIGCGLCVEACP 110 >gi|254524848|ref|ZP_05136903.1| NADH-quinone oxidoreductase subunit i [Stenotrophomonas sp. SKA14] gi|219722439|gb|EED40964.1| NADH-quinone oxidoreductase subunit i [Stenotrophomonas sp. SKA14] Length = 162 Score = 41.7 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 28/103 (27%), Gaps = 18/103 (17%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + H R+ +G C+ C C CP+ D Sbjct: 31 KYTMMYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTR 90 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L++C C +SCP Sbjct: 91 RTTRYDID------------------LFKCIFCGFCEESCPVD 115 >gi|323485356|ref|ZP_08090705.1| hypothetical protein HMPREF9474_02456 [Clostridium symbiosum WAL-14163] gi|323401392|gb|EGA93741.1| hypothetical protein HMPREF9474_02456 [Clostridium symbiosum WAL-14163] Length = 452 Score = 41.7 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 13/95 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF--RLY 225 C+ C+ CS CP P + R L D + L+D Sbjct: 253 SACIQCSFCSQLCPRALLG-----HPLKPHRIMRKLASCHDIT-----EILDDSDIRNAA 302 Query: 226 RCHTIMNCT-QSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL P + +K L + Sbjct: 303 LCCECGICEIFACPMGLQPRRINGILKGELAKAGL 337 >gi|302526482|ref|ZP_07278824.1| D-lactate dehydrogenase [Streptomyces sp. AA4] gi|302435377|gb|EFL07193.1| D-lactate dehydrogenase [Streptomyces sp. AA4] Length = 927 Score = 41.7 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 15/99 (15%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + CV C CPSY D + + + + + Sbjct: 527 HRCVGVGKCRADNRAAGGFMCPSYLATRDEKDSTRGRARVLQEVANGTLVSG---WSDAA 583 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 L C + C CP G++ A+ K L RK Sbjct: 584 VHESLDLCLSCKACGSDCPAGVDLAQY----KSEALHRK 618 >gi|118444862|ref|YP_878758.1| anaerobic sulfite reductase subunit A [Clostridium novyi NT] gi|118135318|gb|ABK62362.1| anaerobic sulfite reductase subunit A [Clostridium novyi NT] Length = 333 Score = 41.7 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 37/117 (31%), Gaps = 24/117 (20%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA---------------------Y 200 + C+ C C+ CP+ + + + + + Sbjct: 212 MWDEYSTRCIACGRCNFVCPTCTCFTMQDIFYRDNRKNGERRRVWASCQVDGFTNMAGGH 271 Query: 201 RWLIDSRDEFQGERLDNLED---PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + D+ + + + + D F + C C CP+ ++ + I K++ + Sbjct: 272 GFRKDNGSRMRFKVMHKVYDFNKRFGYHMCVGCGRCDDVCPEYISFSNCINKLEKAM 328 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 8/136 (5%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLR-RSCREGICGSCGMNIDGTNTLACVKDMKDI 107 +D + ++ I +I + S R CG C T C Sbjct: 186 TIDYVTENKVSVNIPENIDERIFKSNMWDEYSTRCIACGRCNFVC---PTCTCFTMQDIF 242 Query: 108 KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGL 167 + + ++ + K + +++ D K G Sbjct: 243 YRDNR----KNGERRRVWASCQVDGFTNMAGGHGFRKDNGSRMRFKVMHKVYDFNKRFGY 298 Query: 168 YECVMCACCSTSCPSY 183 + CV C C CP Y Sbjct: 299 HMCVGCGRCDDVCPEY 314 >gi|312885980|ref|ZP_07745608.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] gi|311301517|gb|EFQ78558.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] Length = 197 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 10/125 (8%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE--DRQKIDGLYECVMC 173 L H V S + + T + + ++ L E Q + +C++C Sbjct: 20 LRHFFASNKQRVVSSVKSDNYFEEQDGKGTNTIQYPQQKLPVPEVGRYQLDVEMDDCIVC 79 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C+ CP D ++A + + D RL + + +C C Sbjct: 80 DLCAKVCPVDCITID-------SIKATEAIGQTSDGTTK-RLYAAKFDIDMAKCMYCGLC 131 Query: 234 TQSCP 238 T CP Sbjct: 132 TVVCP 136 >gi|317050320|ref|YP_004111436.1| D-lactate dehydrogenase (cytochrome) [Desulfurispirillum indicum S5] gi|316945404|gb|ADU64880.1| D-lactate dehydrogenase (cytochrome) [Desulfurispirillum indicum S5] Length = 987 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 8/92 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ-GERLDNLEDP- 221 + + +C+ C C +CPS L P + R++ R Q GE L +ED Sbjct: 547 HEIIDKCIECGFCEVNCPSRNLT----LTPRQRITTQRYITSLRAIGQSGELLKRVEDDY 602 Query: 222 --FRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C +CP ++ ++ Sbjct: 603 QYMGEATCAADGLCATTCPVAIDTGSHTKNLR 634 >gi|295676045|ref|YP_003604569.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. CCGE1002] gi|295435888|gb|ADG15058.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. CCGE1002] Length = 162 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + Sbjct: 26 YTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|218961951|ref|YP_001741726.1| putative bifunctional glutamate synthase [NADPH] small chain / formate dehydrogenase large chain (Glutamate synthase beta subunit / formate dehydrogenase alpha subunit) [Candidatus Cloacamonas acidaminovorans] gi|167730608|emb|CAO81520.1| putative bifunctional glutamate synthase [NADPH] small chain / formate dehydrogenase large chain (Glutamate synthase beta subunit / formate dehydrogenase alpha subunit) [Candidatus Cloacamonas acidaminovorans] Length = 1115 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 14/120 (11%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + V+ + ++ + + + + +C+ C C +C Sbjct: 578 LECGCFVNETCSLRKYCTDYFVNPAQFLGDKNKHPIDYSHPFIMRDPNKCIYCGRCIRTC 637 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 GPA+L YR F D C + C CP G Sbjct: 638 AEIQ-------GPAVLGYIYR-------GFATLVAPEFGDSLTKTSCLSCGKCIDVCPVG 683 >gi|82778087|ref|YP_404436.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella dysenteriae Sd197] gi|309786197|ref|ZP_07680825.1| formate hydrogenlyase subunit 6 [Shigella dysenteriae 1617] gi|81242235|gb|ABB62945.1| probable iron-sulfur protein of hydrogenase 3 [Shigella dysenteriae Sd197] gi|308925942|gb|EFP71421.1| formate hydrogenlyase subunit 6 [Shigella dysenteriae 1617] Length = 180 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L L+ F L RC Sbjct: 39 QCIGCAACVNACPSNALTVETDLATGELVW----------------------EFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|21231952|ref|NP_637869.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767921|ref|YP_242683.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. campestris str. 8004] gi|188991037|ref|YP_001903047.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. campestris str. B100] gi|81306102|sp|Q4UWB0|NUOI_XANC8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81860266|sp|Q8P7U0|NUOI_XANCP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21113682|gb|AAM41793.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573253|gb|AAY48663.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167732797|emb|CAP50991.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas campestris pv. campestris] Length = 163 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 38 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 98 ID------------------LFKCIFCGFCEESCPVD 116 >gi|289665181|ref|ZP_06486762.1| NADH dehydrogenase subunit I [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 163 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 38 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 98 ID------------------LFKCIFCGFCEESCPVD 116 >gi|270158106|ref|ZP_06186763.1| NADH-quinone oxidoreductase I subunit [Legionella longbeachae D-4968] gi|289163629|ref|YP_003453767.1| NADH-quinone oxidoreductase chain I [Legionella longbeachae NSW150] gi|269990131|gb|EEZ96385.1| NADH-quinone oxidoreductase I subunit [Legionella longbeachae D-4968] gi|288856802|emb|CBJ10613.1| NADH-quinone oxidoreductase chain I [Legionella longbeachae NSW150] Length = 166 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I + R+ +G C+ C C CP+ + Sbjct: 34 KKITVQFPEEKTPISPRFRGLLALRRYPNGEERCIACKLCEAVCPALAITIEAQPREDGT 93 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID ++C C +SCP Sbjct: 94 RRTTRYDIDM------------------FKCINCGLCEESCPVD 119 >gi|261250614|ref|ZP_05943189.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio orientalis CIP 102891] gi|260939183|gb|EEX95170.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio orientalis CIP 102891] Length = 472 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 25/91 (27%), Gaps = 7/91 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE 219 + C CP Y + Y DS R E +G R + Sbjct: 211 AGCTYANAGWMRSIMCIHMCP-YARFQSAMFDKDTFIVGY----DSKRGETRGPRSRKAD 265 Query: 220 DPF-RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 266 HKALGLGDCIDCDLCVQVCPTGIDIRDGLQY 296 >gi|315230303|ref|YP_004070739.1| sulfhydrogenase II subunit b [Thermococcus barophilus MP] gi|315183331|gb|ADT83516.1| sulfhydrogenase II subunit b [Thermococcus barophilus MP] Length = 367 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 26/109 (23%) Query: 158 HEDRQKIDGLYECVMCACCSTSCPS---YWWNSDRYLGPAILLQAYRWLIDS-------- 206 E + C+ C C+ +CP+ Y L ++ RW DS Sbjct: 221 MEHPMWDEQSELCLGCGNCNLTCPTCRCYDVQDIPNLDGDTGVRIRRW--DSCQLRSHGL 278 Query: 207 -------RDEFQGERLD------NLEDPFRLYRCHTIMNCTQSCPKGLN 242 R + ++ + + C CT CP G++ Sbjct: 279 VAGGHNFRPTKKSRFMNRYLCKNAYNEKLGISYCVGCGRCTYFCPAGIS 327 >gi|254167854|ref|ZP_04874703.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|197623145|gb|EDY35711.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] Length = 350 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 7/87 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C CP + + ++ + D+ G RL + F Sbjct: 217 EDFLSSCLNCHNCKDMCPICFCKECFFEDHSVFDYESNKFYNWADDKDGIRLPTDKSLFH 276 Query: 224 LYR-------CHTIMNCTQSCPKGLNP 243 + R C C Q+CP + Sbjct: 277 IGRLIHMGTSCVGCGLCQQACPMDIPL 303 >gi|170751379|ref|YP_001757639.1| formate dehydrogenase, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170657901|gb|ACB26956.1| formate dehydrogenase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 953 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 31/105 (29%), Gaps = 15/105 (14%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGP 193 R V P K L + + +C++C C +C + G Sbjct: 137 RDVRYGYEGDNHVRPSSEKYLPKDESNPYFTYDPSKCIVCNRCVRAC-------EEVQGT 189 Query: 194 AILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L A R DSR E C + C Q+CP Sbjct: 190 FALTIAGR-GFDSRVAAGPTNFFESE-------CVSCGACVQACP 226 >gi|167752660|ref|ZP_02424787.1| hypothetical protein ALIPUT_00916 [Alistipes putredinis DSM 17216] gi|167659729|gb|EDS03859.1| hypothetical protein ALIPUT_00916 [Alistipes putredinis DSM 17216] Length = 111 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 15/100 (15%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 +S E +++ L C+ C C+ +C + + + R Sbjct: 24 RKSDEILREMPELQTCIGCGGCTATCTAGNLTD--FNFRKLHTLVRRGEYQG-------V 74 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + + +C C CP+G+N + IK L Sbjct: 75 YEQMN------KCMLCGKCRLVCPRGINTRAVVMLIKRKL 108 >gi|18369662|emb|CAD21635.1| putative dehydrogenase subunit [Azoarcus evansii] Length = 850 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 22/121 (18%) Query: 134 SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSD-RYLG 192 + T P +L ++ C+ C C +C + G Sbjct: 164 RKVSDYIGIPNTTPPYKPAQLPVVLDEPFFDRDYNLCIDCRRCLVACNDVRGVGCLEFKG 223 Query: 193 PAILLQAYRWLIDSRDEFQGER--LDNLEDPFRLYRCHTIMNCTQSCPKG------LNPA 244 SRD +QG+R + + C C CP G L+PA Sbjct: 224 -------------SRDAWQGKRTYVGTIAPTLIESGCTFCQACVTVCPTGALMDRTLDPA 270 Query: 245 K 245 K Sbjct: 271 K 271 >gi|55376868|ref|YP_134719.1| formate dehydrogenase alpha subunit [Haloarcula marismortui ATCC 43049] gi|55229593|gb|AAV45013.1| formate dehydrogenase alpha subunit [Haloarcula marismortui ATCC 43049] Length = 1103 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/174 (10%), Positives = 45/174 (25%), Gaps = 28/174 (16%) Query: 82 EGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY-PLPHMSVIKDLVVDMSHFYSQHRSIE 140 G+ SC + +++ + ++ + L + ++ Q +I Sbjct: 120 HGLVPSCSFPAEDGLSVSTDTPDAEEARSVNLDLVLSNHNLRCTTCNGNGRCELQDAAIS 179 Query: 141 PWLKTVS----PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + +C++C C +C Sbjct: 180 EGVDHPRYGVFDERDQYEPIDDTSSFIQIDRNKCILCNRCVDACNDVQVEG--------- 230 Query: 197 LQAYRWLIDSRDEFQ--GERLDNLEDPFRLYRCHTIMNCTQSCP------KGLN 242 R D + + D C + +C CP KG++ Sbjct: 231 --VLRIEGHGEDTRIGFQSDAETMHDSE----CVSCGHCATVCPTGSLTEKGID 278 >gi|83589371|ref|YP_429380.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572285|gb|ABC18837.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 386 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 8/81 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 + + C C C +CP+ + L P + +L R E L Sbjct: 172 EAGQPLTQATCRNCGRCLAACPTGALVAPGRLHPELC---LSYLTQKRGVIPVELRPALG 228 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 ++ C C + CP+ Sbjct: 229 --RHIWGCD---ACQEVCPEN 244 >gi|17227720|ref|NP_484268.1| NADH dehydrogenase subunit I [Nostoc sp. PCC 7120] gi|28201842|sp|Q9WWM6|NDHI_ANASP RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I gi|5042149|emb|CAB44669.1| NDH-I protein [Nostoc sp. PCC 7120] gi|17135202|dbj|BAB77748.1| NADH dehydrogenase subunit I [Nostoc sp. PCC 7120] Length = 194 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 24/121 (19%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + L V H + +++ + + P +E +C+ C C Sbjct: 19 GRYIGQGLSVTFDHMRRRPVTVQYPYEKLIPGERFRGRIHYE-------FDKCIACEVCV 71 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP D W D + ++L++ F + C NC + C Sbjct: 72 RVCPINLPVVD-------------WEFDK--ATKKKKLNHYSIDFGV--CIFCGNCVEYC 114 Query: 238 P 238 P Sbjct: 115 P 115 >gi|86131880|ref|ZP_01050477.1| cytochrome c oxidase accessory protein CcoG [Dokdonia donghaensis MED134] gi|85817702|gb|EAQ38876.1| cytochrome c oxidase accessory protein CcoG [Dokdonia donghaensis MED134] Length = 473 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 8/84 (9%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF- 222 ++ C +CP Y L ++ AY R E + R ++ Sbjct: 207 FYFIFAWFREQVCIIACP-YGRLQGVLLDNKSIVVAY---DHKRGEKEEGRAKFKKNEER 262 Query: 223 ---RLYRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 263 ATTGKGDCIDCFACVHVCPTGIDI 286 >gi|321460435|gb|EFX71477.1| hypothetical protein DAPPUDRAFT_93364 [Daphnia pulex] Length = 183 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + V ++HF+ + +I + + H R+ G C+ C C Sbjct: 36 EIFRGFGVTLAHFFKEPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCEAI 93 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 94 CPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFCQEACPV 135 Query: 240 G 240 Sbjct: 136 D 136 >gi|304310833|ref|YP_003810431.1| 4fe-4s ferredoxin, iron-sulfur binding protein [gamma proteobacterium HdN1] gi|301796566|emb|CBL44778.1| 4fe-4s ferredoxin, iron-sulfur binding protein [gamma proteobacterium HdN1] Length = 478 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP + S + +++ +R E +G+R + L C C Sbjct: 229 CIYMCPYARFQSVMFDRDTLIVTYDA----ARGEARGKRKKAADPKALDLGDCVDCQLCV 284 Query: 235 QSCPKGLNP 243 Q CP G++ Sbjct: 285 QVCPTGIDI 293 >gi|291544145|emb|CBL17254.1| hypothetical protein RUM_11010 [Ruminococcus sp. 18P13] Length = 341 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 21/116 (18%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYR------WLIDSRDE 209 + + + D C+ C C+ CP+ + ++ +R + ++ Sbjct: 220 KFFDAPEWKDLSATCLGCGTCTFVCPTCQCYDIKDFNTGHGVKRFRCWDSCMYSDFTKMS 279 Query: 210 FQGERLDNLE---------------DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 RL LE + ++ C C CP +N K + K+ Sbjct: 280 AGQPRLTQLERFRQRFMHKLVYYPTNNDGMFSCVGCGRCLAKCPIQMNIVKVMKKL 335 >gi|240102569|ref|YP_002958878.1| hypothetical protein TGAM_0512 [Thermococcus gammatolerans EJ3] gi|239910123|gb|ACS33014.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase), containing one PUA domain and 2 4Fe-4S binding domains [Thermococcus gammatolerans EJ3] Length = 634 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 25/98 (25%), Gaps = 26/98 (26%) Query: 141 PWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY 200 + A + ++ + YECV C C CP + D Sbjct: 550 EFFTRTRKAKAPDEREAVSAYYLVKRAYECVGCGVCVGKCPEEALSIDE----------- 598 Query: 201 RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + D RC C + CP Sbjct: 599 ------------KSKKIVVDWN---RCTHCRECMEVCP 621 >gi|226365388|ref|YP_002783171.1| NADH dehydrogenase subunit I [Rhodococcus opacus B4] gi|254772596|sp|C1AZF5|NUOI_RHOOB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226243878|dbj|BAH54226.1| NADH-quinone oxidoreductase chain I [Rhodococcus opacus B4] Length = 188 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 20/117 (17%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V S + + + + A H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTFSTMFKKANT--EFYPEEKTPTAPRYHGRHQLNRYADGLEKCIGCELCAWACPADA 68 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ DE + GER + L RC C ++CP Sbjct: 69 IFVEG--------------ADNTDEERYSPGERYGRVYQINYL-RCIGCGLCIEACP 110 >gi|298529033|ref|ZP_07016436.1| hypothetical protein Dthio_PD1724 [Desulfonatronospira thiodismutans ASO3-1] gi|298510469|gb|EFI34372.1| hypothetical protein Dthio_PD1724 [Desulfonatronospira thiodismutans ASO3-1] Length = 610 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 27/191 (14%) Query: 75 TLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGA--------IAVYPLPHMSVIKDLV 126 T + G+ + ++ + L ++ +DI I + PL ++ L Sbjct: 165 TFFWVSQLGMLPGTFVFVNAGSHLGRIQSTEDIFSPGLIISLALIGILPLAAKKIVGILK 224 Query: 127 VDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 P + + C C C + C Sbjct: 225 KKYGSQEDHSELSVPVTNPAVSFAPQGMPSESLIHLAEANQQGCSRCEVCVSQC----EF 280 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 +Y P + Q ++D ++ + C C CP+ L+PA Sbjct: 281 LKKYGMPGDIAQG---ILDGKNSTDP------------FECSLCDLCGAICPEKLSPADM 325 Query: 247 IAKIKMMLLDR 257 ++ + Sbjct: 326 FLDMRRQAVQE 336 >gi|225026272|ref|ZP_03715464.1| hypothetical protein EUBHAL_00513 [Eubacterium hallii DSM 3353] gi|224956380|gb|EEG37589.1| hypothetical protein EUBHAL_00513 [Eubacterium hallii DSM 3353] Length = 442 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 48/162 (29%), Gaps = 19/162 (11%) Query: 98 LACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQS 157 LA + I P+ V D + ++ + + P + ++ Sbjct: 190 LAGGVTVNGPYVVINGGPMMGKHVALDSKIT--------KTTKGLIVLPEDHPLIQDVKL 241 Query: 158 HEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 + C C+ CS CP + I +Y L D D Sbjct: 242 PIPKMLHMAKAACCHCSMCSEVCPRHLIGHRIEPNKTIRFASYGSLCDGSDT-------- 293 Query: 218 LEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRKI 259 P + C C +C L P K ++K ++ + I Sbjct: 294 ---PMIAFLCSECRLCQYACIMNLQPWKVNHELKGIMAKQGI 332 >gi|219852224|ref|YP_002466656.1| aldo/keto reductase [Methanosphaerula palustris E1-9c] gi|219546483|gb|ACL16933.1| aldo/keto reductase [Methanosphaerula palustris E1-9c] Length = 380 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 29/103 (28%), Gaps = 3/103 (2%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 E++ D C C C CP D + +A I S+ Sbjct: 267 NPEEYEIIGQVVDIINETTAIPCTNCRYCEGDCPQTIAIPDYFALYNSSKRAVTGNISSQ 326 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKI 250 + L L C C +CP+ L + + + Sbjct: 327 FVYYIN-LTALHGRAG--DCIECRQCESACPQHLKITELLRDV 366 >gi|126133937|ref|XP_001383493.1| mitochondrial complex I NUIM TYKY subunit (proton translocation) [Scheffersomyces stipitis CBS 6054] gi|126095642|gb|ABN65464.1| mitochondrial complex I NUIM TYKY subunit (proton translocation) [Scheffersomyces stipitis CBS 6054] Length = 226 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + M ++ + + H R+ G C+ C C Sbjct: 79 EIARGMYICMEMYFR--SPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 136 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 137 CPAQAITIEAEERIDGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 178 Query: 240 G 240 Sbjct: 179 D 179 >gi|46195430|ref|NP_659119.2| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor [Mus musculus] gi|47117242|sp|Q8K3J1|NDUS8_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|22074762|gb|AAM34451.1| NADH dehydrogenase:ubiquinone Fe-S protein 8 [Mus musculus] gi|56540975|gb|AAH86766.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Mus musculus] gi|74139889|dbj|BAE31784.1| unnamed protein product [Mus musculus] gi|74150399|dbj|BAE32243.1| unnamed protein product [Mus musculus] gi|74204045|dbj|BAE29018.1| unnamed protein product [Mus musculus] gi|74204318|dbj|BAE39914.1| unnamed protein product [Mus musculus] gi|74227922|dbj|BAE37960.1| unnamed protein product [Mus musculus] gi|148701022|gb|EDL32969.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, isoform CRA_a [Mus musculus] gi|148701023|gb|EDL32970.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, isoform CRA_a [Mus musculus] Length = 212 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 20/127 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L +I+ L + +S+ + + +I + + H R+ G C+ C Sbjct: 59 RILMWTELIRGLGMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIAC 116 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP+ + + R+ ID +C C Sbjct: 117 KLCEAICPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFC 158 Query: 234 TQSCPKG 240 ++CP Sbjct: 159 QEACPVD 165 >gi|150019130|ref|YP_001311384.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905595|gb|ABR36428.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 1169 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 19/93 (20%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C CS CP + +L A + L+ Sbjct: 682 PEWDKDKCIQCNQCSMVCP--HASIRPFLLTEAEKNAA------PSANKAVAAKGLKTEE 733 Query: 223 RLY--------RCHTIMNCTQSCPKGLNPAKAI 247 L+ C NC Q CP P KA+ Sbjct: 734 PLFYTMGVTPLDCSGCGNCAQVCPA---PGKAL 763 >gi|116749577|ref|YP_846264.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698641|gb|ABK17829.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 261 Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 34/136 (25%), Gaps = 11/136 (8%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHED---RQKIDGLYECVMCACCSTSC 180 D F EP + L + + C+ C C C Sbjct: 107 DCCECRQPFPDLLDYGEPAAPVTQSRKVDALQAMAMSERRAWWLTHMNRCIHCHGCRDVC 166 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P + L L+ + DS + RC C + CP Sbjct: 167 PVCFCTECS-LEHRELVSGAKLPPDS-------SFHLVRAVHMGGRCIDCGLCEEICPAR 218 Query: 241 LNPAKAIAKIKMMLLD 256 + ++ ++ + Sbjct: 219 IPLRSLYKEVNRLVEE 234 >gi|289620443|emb|CBI53016.1| unnamed protein product [Sordaria macrospora] Length = 221 Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + V M F+ + + H R+ G C+ C C Sbjct: 74 EMFRGMYVAMEQFFRP--PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAV 131 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 132 CPAQAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQESCPV 173 Query: 240 G 240 Sbjct: 174 D 174 >gi|15612254|ref|NP_223907.1| NADH dehydrogenase subunit I [Helicobacter pylori J99] gi|81555114|sp|Q9ZJV9|NUOI_HELPJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|4155779|gb|AAD06755.1| NADH oxidoreductase I [Helicobacter pylori J99] Length = 220 Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + H Sbjct: 13 AEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|74149244|dbj|BAE22408.1| unnamed protein product [Mus musculus] Length = 212 Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 20/127 (15%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 L +I+ L + +S+ + + +I + + H R+ G C+ C Sbjct: 59 RILMWTELIRGLGMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIAC 116 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C CP+ + + R+ ID +C C Sbjct: 117 KLCEAICPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFC 158 Query: 234 TQSCPKG 240 ++CP Sbjct: 159 QEACPVD 165 >gi|117927484|ref|YP_872035.1| NADH dehydrogenase subunit I [Acidothermus cellulolyticus 11B] gi|156632698|sp|A0LRI9|NUOI_ACIC1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|117647947|gb|ABK52049.1| NADH dehydrogenase subunit I [Acidothermus cellulolyticus 11B] Length = 199 Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 16/125 (12%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 LP ++ V + + + + + P + DGL +C+ C Sbjct: 3 NILPG--PLRGFGVTFGTMFRRVTTEQYPDEKKPTMPRYHGRHVL--NRHPDGLEKCIGC 58 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C+ +CP+ Y+ A + R+ GER + L RC C Sbjct: 59 ELCAWACPA----DAIYVEGADNTEEERYSP-------GERYGRVYQINYL-RCIFCGYC 106 Query: 234 TQSCP 238 ++CP Sbjct: 107 IEACP 111 >gi|85076501|ref|XP_955936.1| NADH:ubiquinone oxidoreductase 21.3c kD subunit [Neurospora crassa OR74A] gi|3929361|sp|Q12644|NDUS8_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; Flags: Precursor gi|1246816|emb|CAA64794.1| ferredoxin-like iron-sulfur subunit of mitochondrial complex I [Neurospora crassa] gi|28916969|gb|EAA26700.1| NADH:ubiquinone oxidoreductase 21.3c kD subunit [Neurospora crassa OR74A] Length = 219 Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + V M F+ + + H R+ G C+ C C Sbjct: 72 EMFRGMYVAMEQFFRP--PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAV 129 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 130 CPAQAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQESCPV 171 Query: 240 G 240 Sbjct: 172 D 172 >gi|322379055|ref|ZP_08053458.1| D-lactate dehydrogenase [Helicobacter suis HS1] gi|321148547|gb|EFX43044.1| D-lactate dehydrogenase [Helicobacter suis HS1] Length = 938 Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 13/99 (13%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-------SRDEFQGERLDN 217 L C+ C C CPS + + L P + R + Q + Sbjct: 537 PELEPCMECGFCERICPSRYLS----LTPRQRIVLQREIAHLQERVKNGHVSDQAMLKEL 592 Query: 218 LEDPFRLYR--CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 LE L C C+ CP G++ A K + + Sbjct: 593 LEGYDFLSDETCAACHMCSTLCPLGIDSATIALKSRQRV 631 >gi|256829736|ref|YP_003158464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578912|gb|ACU90048.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 398 Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 18/86 (20%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 C+ C C CP+ + P ++ + + I F+ R ++E C Sbjct: 317 PCINCGECVLVCPAR-------IQPGMISRYAEFNI-----FESTRSQHVE------ACL 358 Query: 229 TIMNCTQSCPKGLNPAKAIAKIKMML 254 CT CP + + K L Sbjct: 359 ECGMCTFVCPANRPVMQYLLLAKKQL 384 >gi|224370246|ref|YP_002604410.1| HmeD [Desulfobacterium autotrophicum HRM2] gi|223692963|gb|ACN16246.1| HmeD [Desulfobacterium autotrophicum HRM2] Length = 548 Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 27/182 (14%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVI----KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELL 155 AV P M + L + Q ++ K Sbjct: 15 DYTPTSGSWMNTAVQIRPGMYCYAAKPESLETLSAPNARQWNPLDKDWKLPENWQQIIHE 74 Query: 156 QSHED----RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ 211 + R + CV C C+ C + D P + + R + + Sbjct: 75 GIKDRLEKFRTFKIFMDVCVRCGACADKCHFFLGTGDPKNMPVLRAELLRSVYRNDFTTV 134 Query: 212 GERLDNLEDPFRL------------------YRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 G+ L + RL ++C C+ CP G++ A+ I + Sbjct: 135 GKILSKVPGGDRLAGGRPMTVDVLKEWWYYFFQCSECRRCSVFCPYGIDTAE-ITIMGRE 193 Query: 254 LL 255 LL Sbjct: 194 LL 195 >gi|219849508|ref|YP_002463941.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543767|gb|ACL25505.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Chloroflexus aggregans DSM 9485] Length = 1192 Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 23/98 (23%), Gaps = 9/98 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + C+ C C CP + P L S Sbjct: 670 PTGTTKWEKRNIAIEIPVWDPNICIQCNKCVFVCP--HATIRAKVYPEEALAGAPEGFQS 727 Query: 207 RDEFQGE----RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 E R P C C ++CP Sbjct: 728 APARFKEFPGQRYTLQVAPE---DCTGCGLCVEACPVK 762 >gi|15836916|ref|NP_297604.1| NADH dehydrogenase subunit I [Xylella fastidiosa 9a5c] gi|28198179|ref|NP_778493.1| NADH dehydrogenase subunit I [Xylella fastidiosa Temecula1] gi|81839557|sp|Q87EP7|NUOI_XYLFT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81858452|sp|Q9PGI7|NUOI_XYLFA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|9105136|gb|AAF83124.1|AE003884_9 NADH-ubiquinone oxidoreductase, NQO9 subunit [Xylella fastidiosa 9a5c] gi|28056249|gb|AAO28142.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xylella fastidiosa Temecula1] Length = 163 Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 38 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 98 ID------------------LFKCIFCGFCEESCPVD 116 >gi|332975511|gb|EGK12401.1| formate dehydrogenase [Desmospora sp. 8437] Length = 991 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 54/212 (25%), Gaps = 34/212 (16%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLACVK 102 +D V G +L+ + + P + C C + DG AC Sbjct: 8 YLDE-QVIPAREGQTILEAAREAEVSL-PGICYHPQLGGLQTCDVCLVEADGEWVRACAT 65 Query: 103 D----MKDIKGAIAVY---------PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPK 149 MK + V L + + + + + H + + Sbjct: 66 PARPGMKVVSRGERVEAARYEAMSRVLHNHELYCTVCDNNNGNCEVHNTAQQLRLNHQEY 125 Query: 150 PAKELLQSHEDRQKIDGL--YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID-S 206 + ++ +C++C C +C + N + W D Sbjct: 126 DFEPKPDPPDNSHPFYRYEPDQCILCGRCVEACQNLQVNETLTIDWNRDRPRVVWDHDVP 185 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 D C + +C CP Sbjct: 186 IDRS---------------SCVSCGHCVTVCP 202 >gi|331006088|ref|ZP_08329424.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC1989] gi|330420125|gb|EGG94455.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC1989] Length = 484 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 21/87 (24%), Gaps = 3/87 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C CP + S Y + + D R + D Sbjct: 215 MTYMNAGFLREQVCKYMCPYARFQSVMYDDDTLAVHYDTERGDPRGARKP---DEDYKAE 271 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP ++ + Sbjct: 272 GKGDCIDCSWCVQVCPVDIDIRDGLQY 298 >gi|325915547|ref|ZP_08177858.1| NADH dehydrogenase subunit I [Xanthomonas vesicatoria ATCC 35937] gi|325538263|gb|EGD09948.1| NADH dehydrogenase subunit I [Xanthomonas vesicatoria ATCC 35937] Length = 163 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 38 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGSRRTTRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 98 ID------------------LFKCIFCGFCEESCPVD 116 >gi|323693878|ref|ZP_08108067.1| hypothetical protein HMPREF9475_02930 [Clostridium symbiosum WAL-14673] gi|323502074|gb|EGB17947.1| hypothetical protein HMPREF9475_02930 [Clostridium symbiosum WAL-14673] Length = 386 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 9/98 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNL 218 D + + C CA C CP + + + AY + +D FQ L Sbjct: 285 DMFLKNKMIPCTGCAYCRE-CP-------KQVNIPKIFAAYNQYLVGKDNFQFYNAYSKL 336 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + R C C + CP+G+ ++ + I+ +++ Sbjct: 337 KAEERAGNCIGCRKCMEHCPQGIRISEELDMIQKLVVR 374 >gi|323485718|ref|ZP_08091055.1| hypothetical protein HMPREF9474_02806 [Clostridium symbiosum WAL-14163] gi|323400981|gb|EGA93342.1| hypothetical protein HMPREF9474_02806 [Clostridium symbiosum WAL-14163] Length = 386 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 9/98 (9%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG-ERLDNL 218 D + + C CA C CP + + + AY + +D FQ L Sbjct: 285 DMFLKNKMIPCTGCAYCRE-CP-------KQVNIPKIFAAYNQYLVGKDNFQFYNAYSKL 336 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + R C C + CP+G+ + + I+ +++ Sbjct: 337 KAEERAGNCIGCRKCIEHCPQGIRITEELDMIQKLVVR 374 >gi|313672863|ref|YP_004050974.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Calditerrivibrio nitroreducens DSM 19672] gi|312939619|gb|ADR18811.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Calditerrivibrio nitroreducens DSM 19672] Length = 1185 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 27/95 (28%), Gaps = 3/95 (3%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRY-LGPAILLQAYRWLID 205 +K ++ + C+ C CS CP Y + + D Sbjct: 674 PTGTSKYEKRNIANFVPEWDPEICIQCGICSFVCPHATIRMKIYEPDVLKNVPSTFKSAD 733 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +R + ++ + C C +CP Sbjct: 734 ARGKEFAGMKCTIQVA--VEDCTGCGACVYNCPAK 766 >gi|315587159|gb|ADU41540.1| NADH-quinone oxidoreductase subunit I [Helicobacter pylori 35A] Length = 220 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|255019946|ref|ZP_05292020.1| NADH-ubiquinone oxidoreductase chain I [Acidithiobacillus caldus ATCC 51756] gi|254970605|gb|EET28093.1| NADH-ubiquinone oxidoreductase chain I [Acidithiobacillus caldus ATCC 51756] Length = 173 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEP--WLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 V++ +V Q P+ + DG CV C CS Sbjct: 3 PVLRSWIVGFWTTLRQLGRWPVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCS 62 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ + P D R + R++ RC C ++C Sbjct: 63 AVCPTQCIELEGDDRP-----------DGRRYARTFRIN-------FSRCIYCGLCEEAC 104 Query: 238 P 238 P Sbjct: 105 P 105 >gi|256830114|ref|YP_003158842.1| Formate dehydrogenase [Desulfomicrobium baculatum DSM 4028] gi|256579290|gb|ACU90426.1| Formate dehydrogenase [Desulfomicrobium baculatum DSM 4028] Length = 380 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 165 DGLYECVMCACCSTSCPS------------YWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 L CV C C +CP + +YL A + + D+ + Sbjct: 251 QYLGSCVNCYNCRVACPVCYCKECVFNTDVFEHKPWQYLDWAKRKGSLKLPTDT-VFYHL 309 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 R+ ++ C C+ +CP G+ + Sbjct: 310 TRMAHMST-----ACVGCGQCSNACPNGVEVVEL 338 >gi|110632767|ref|YP_672975.1| FAD linked oxidase-like [Mesorhizobium sp. BNC1] gi|110283751|gb|ABG61810.1| FAD linked oxidase-like protein [Chelativorans sp. BNC1] Length = 951 Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 10/122 (8%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + + + P L + + +C+ C C CPS + L P Sbjct: 501 KGVLNPGVVICDDPGIHLRDLKQLPSVNPVIDKCIECGFCEPVCPSRALS----LTPRQR 556 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 + A R + R+ G + C C ++CP G++ ++ + Sbjct: 557 IAATRAMA-GREGETGP-FAASYAYQAVETCAGDGLCARNCPVGIDTG----EMMRLQRA 610 Query: 257 RK 258 RK Sbjct: 611 RK 612 >gi|330831550|ref|YP_004394502.1| cytochrome c oxidase accessory protein CcoG [Aeromonas veronii B565] gi|328806686|gb|AEB51885.1| Cytochrome c oxidase accessory protein CcoG [Aeromonas veronii B565] Length = 483 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 7/84 (8%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS-RDEFQGERLDNLE-DPFRLY 225 + C CP Y + Y D+ R E +G R + L Sbjct: 223 AGWMRAIMCIHMCP-YARFQSAMFDKDTFIVGY----DTKRGETRGARSRKADPKAMGLG 277 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAK 249 C C Q CP G++ + Sbjct: 278 DCIDCDLCVQVCPTGIDIRDGLQY 301 >gi|304410532|ref|ZP_07392150.1| formate dehydrogenase, alpha subunit [Shewanella baltica OS183] gi|307304625|ref|ZP_07584375.1| formate dehydrogenase, alpha subunit [Shewanella baltica BA175] gi|304351016|gb|EFM15416.1| formate dehydrogenase, alpha subunit [Shewanella baltica OS183] gi|306912027|gb|EFN42451.1| formate dehydrogenase, alpha subunit [Shewanella baltica BA175] Length = 1425 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 19/81 (23%), Gaps = 6/81 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C QA L E R + Sbjct: 643 FIQFDANRCISCGKCVDVC-QLQSGHCAIQFAHDSYQA---LPQDLSETIERRAPRVGFS 698 Query: 222 FRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 699 ASMADSKCVQCGNCVQVCPTG 719 >gi|217974577|ref|YP_002359328.1| formate dehydrogenase subunit alpha [Shewanella baltica OS223] gi|217499712|gb|ACK47905.1| formate dehydrogenase, alpha subunit [Shewanella baltica OS223] Length = 1425 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 19/81 (23%), Gaps = 6/81 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C QA L E R + Sbjct: 643 FIQFDANRCISCGKCVDVC-QLQSGHCAIQFAHDSYQA---LPQDLSETIERRAPRVGFS 698 Query: 222 FRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 699 ASMADSKCVQCGNCVQVCPTG 719 >gi|153002002|ref|YP_001367683.1| formate dehydrogenase subunit alpha [Shewanella baltica OS185] gi|151366620|gb|ABS09620.1| formate dehydrogenase, alpha subunit [Shewanella baltica OS185] Length = 1425 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 19/81 (23%), Gaps = 6/81 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C QA L E R + Sbjct: 643 FIQFDANRCISCGKCVDVC-QLQSGHCAIQFAHDSYQA---LPQDLSETIERRAPRVGFS 698 Query: 222 FRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 699 ASMADSKCVQCGNCVQVCPTG 719 >gi|39995455|ref|NP_951406.1| NADH dehydrogenase I subunit I [Geobacter sulfurreducens PCA] gi|81703471|sp|Q74GA0|NUOI1_GEOSL RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|39982218|gb|AAR33679.1| NADH dehydrogenase I, I subunit [Geobacter sulfurreducens PCA] gi|298504454|gb|ADI83177.1| NADH dehydrogenase I, I subunit [Geobacter sulfurreducens KN400] Length = 132 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M +I L + + H + + +++ + +P P L + + +CV C C T Sbjct: 3 MPLINGLKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALK---VSHDKAKCVACYLCPT 59 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + A R+ ID RC C ++CP Sbjct: 60 VCPAKCITVEAGEDATHDKYAERYEIDML------------------RCIFCGYCVEACP 101 Query: 239 KG 240 Sbjct: 102 VD 103 >gi|126173116|ref|YP_001049265.1| formate dehydrogenase subunit alpha [Shewanella baltica OS155] gi|125996321|gb|ABN60396.1| formate dehydrogenase, alpha subunit [Shewanella baltica OS155] Length = 1425 Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 19/81 (23%), Gaps = 6/81 (7%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 C+ C C C QA L E R + Sbjct: 643 FIQFDANRCISCGKCVDVC-QLQSGHCAIQFAHDSYQA---LPQDLSETIERRAPRVGFS 698 Query: 222 FRLYR--CHTIMNCTQSCPKG 240 + C NC Q CP G Sbjct: 699 ASMADSKCVQCGNCVQVCPTG 719 >gi|311897898|dbj|BAJ30306.1| putative NADH-quinone oxidoreductase subunit I [Kitasatospora setae KM-6054] Length = 195 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 A H+ + DGL +CV C C+ +CP+ + Sbjct: 34 PEYKKPTAPRFHGRHQLNRHPDGLEKCVGCELCAWACPADAIYVEG-------------- 79 Query: 204 IDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCP 238 D+RD+ + GER + RC C ++CP Sbjct: 80 ADNRDDERYSPGERYGAVYQINYA-RCILCGLCVEACP 116 >gi|322421844|ref|YP_004201067.1| molybdopterin oxidoreductase [Geobacter sp. M18] gi|320128231|gb|ADW15791.1| molybdopterin oxidoreductase [Geobacter sp. M18] Length = 821 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 22/93 (23%), Gaps = 17/93 (18%) Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 +E+ + C+ C C+ C AY ++ Sbjct: 125 TDEKFNHEIDYENPLIERDMNRCIHCGKCARICDEIVSYG-----------AYTFINRGI 173 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + C +C CP G Sbjct: 174 EA------KMGTEFDGPLNCEFCGSCVSVCPVG 200 >gi|251792878|ref|YP_003007604.1| hydrogenase-4 subunit H [Aggregatibacter aphrophilus NJ8700] gi|247534271|gb|ACS97517.1| hydrogenase-4 component H [Aggregatibacter aphrophilus NJ8700] Length = 215 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 28/117 (23%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID-GLYECVMCACCSTSCPSYWWNSDRY 190 + +++ + P K + R K + +C++CA C+ +CP+ Sbjct: 1 MFKLLKTVFKTGDATTKYPFKPYEVDEDFRGKPELNSDQCIVCAACTMTCPANALTMRT- 59 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D GER +L L RC C + CP KAI Sbjct: 60 -----------------DPVTGERTWSLF----LGRCIFCGRCEEVCP-----TKAI 90 >gi|150401008|ref|YP_001324774.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanococcus aeolicus Nankai-3] gi|150013711|gb|ABR56162.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanococcus aeolicus Nankai-3] Length = 374 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 19/84 (22%), Gaps = 8/84 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C +CP + ++ + Sbjct: 272 WKEYWSRCIKCYGCRDACPLC--------FCKECALSQDYMDKGEIPPDPIMFQGIRLSH 323 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKA 246 + C C CP + A Sbjct: 324 MSFSCINCGQCEDVCPIEIPVAHI 347 >gi|108760010|ref|YP_631840.1| FAD-binding oxidoreductase [Myxococcus xanthus DK 1622] gi|108463890|gb|ABF89075.1| oxidoreductase, FAD-binding [Myxococcus xanthus DK 1622] Length = 1067 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 32/124 (25%), Gaps = 8/124 (6%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSC 180 VVD + + R + +D CV C T C Sbjct: 559 VVDPNPIDQELRLGRDFRARTWKPRTHFKYP-DDDGLLYRATERCVGVGKCRRDGGGTMC 617 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 PSY + ++ G R D + L C C CP Sbjct: 618 PSYMVTKEEKHTTRGRAHLLFEMLQGEVIKNGWRDDKV--KESLDLCLACKGCKGDCPVQ 675 Query: 241 LNPA 244 ++ A Sbjct: 676 VDLA 679 >gi|58582850|ref|YP_201866.1| NADH dehydrogenase subunit I [Xanthomonas oryzae pv. oryzae KACC10331] gi|75508126|sp|Q5GXU0|NUOI_XANOR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|58427444|gb|AAW76481.1| NADH-ubiquinone oxidoreductase NQO9 subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 163 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 + H R+ +G C+ C C CP+ D + R+ Sbjct: 38 PMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYD 97 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ID L++C C +SCP Sbjct: 98 ID------------------LFKCIFCGFCEESCPVD 116 >gi|308064046|gb|ADO05933.1| NADH dehydrogenase subunit I [Helicobacter pylori Sat464] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 19/129 (14%) Query: 110 AIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE 169 + + + K L + + F+S +I + P + H R G Sbjct: 23 KDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSER 81 Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C C C S R + + + R L RC Sbjct: 82 CIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIY 123 Query: 230 IMNCTQSCP 238 C + CP Sbjct: 124 CGLCAEVCP 132 >gi|308185016|ref|YP_003929149.1| NADH dehydrogenase subunit I [Helicobacter pylori SJM180] gi|308060936|gb|ADO02832.1| NADH dehydrogenase subunit I [Helicobacter pylori SJM180] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + H Sbjct: 13 SEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|296448076|ref|ZP_06889979.1| formate dehydrogenase, alpha subunit [Methylosinus trichosporium OB3b] gi|296254433|gb|EFH01557.1| formate dehydrogenase, alpha subunit [Methylosinus trichosporium OB3b] Length = 959 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%), Gaps = 14/106 (13%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y + + + + + + +C++C C +C + G Sbjct: 143 YDGANHVFARSRKDGAANFEWMPKDESNPYFTYDPSKCIVCNRCVRAC-------EETQG 195 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 L R DSR + + C + C Q+CP Sbjct: 196 TFALTIDGR-GFDSRVSPGMA--EAFMESE----CVSCGACVQACP 234 >gi|208435162|ref|YP_002266828.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori G27] gi|226737395|sp|B5Z8R3|NUOI_HELPG RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|208433091|gb|ACI27962.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori G27] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + H Sbjct: 13 SEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|149246748|ref|XP_001527799.1| NADH-quinone oxidoreductase chain I [Lodderomyces elongisporus NRRL YB-4239] gi|146447753|gb|EDK42141.1| NADH-quinone oxidoreductase chain I [Lodderomyces elongisporus NRRL YB-4239] Length = 246 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + + ++ + + H R+ G C+ C C Sbjct: 99 EIFRGMYICLEMYFR--SPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 156 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 157 CPAQAITIEAEERADGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 198 Query: 240 G 240 Sbjct: 199 D 199 >gi|108563637|ref|YP_627953.1| NADH dehydrogenase subunit I [Helicobacter pylori HPAG1] gi|115502531|sp|Q1CRZ3|NUOI_HELPH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|107837410|gb|ABF85279.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori HPAG1] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + H Sbjct: 13 AEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|91782620|ref|YP_557826.1| NADH dehydrogenase subunit I [Burkholderia xenovorans LB400] gi|296160637|ref|ZP_06843452.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. Ch1-1] gi|115502523|sp|Q142G5|NUOI_BURXL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91686574|gb|ABE29774.1| NADH dehydrogenase subunit I [Burkholderia xenovorans LB400] gi|295889163|gb|EFG68966.1| NADH-quinone oxidoreductase, chain I [Burkholderia sp. Ch1-1] Length = 162 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + Sbjct: 26 YTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|83313289|ref|YP_423553.1| protein rdxB [Magnetospirillum magneticum AMB-1] gi|82948130|dbj|BAE52994.1| Protein rdxB [Magnetospirillum magneticum AMB-1] Length = 481 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 5/68 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + ++++ W + + + C +C Q Sbjct: 223 CVYLCPYSRFQSAMFDEHSLIVTYEAWRGEPGGPARKG-----QSFEGRGHCVDCRSCVQ 277 Query: 236 SCPKGLNP 243 +CP G++ Sbjct: 278 ACPTGIDI 285 >gi|332674071|gb|AEE70888.1| NADH-quinone oxidoreductase subunit I [Helicobacter pylori 83] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|303235326|ref|ZP_07321944.1| putative electron transport complex protein RnfC [Finegoldia magna BVS033A4] gi|302493640|gb|EFL53428.1| putative electron transport complex protein RnfC [Finegoldia magna BVS033A4] Length = 442 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 26/98 (26%), Gaps = 18/98 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E + C+ CA C CP + LQ D + Sbjct: 355 MNEKDATLASPEPCIKCAKCVDVCPIGLLP--------LFLQLKSLNGDFEGAEK----- 401 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C+ CP +AI K L Sbjct: 402 -----MHLNDCIECGTCSYICPSNRPLVEAIVHAKTQL 434 >gi|302381047|ref|ZP_07269507.1| putative electron transport complex protein RnfC [Finegoldia magna ACS-171-V-Col3] gi|302311094|gb|EFK93115.1| putative electron transport complex protein RnfC [Finegoldia magna ACS-171-V-Col3] Length = 442 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 26/98 (26%), Gaps = 18/98 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E + C+ CA C CP + LQ D + Sbjct: 355 MNEKDATLASPEPCIKCAKCVDVCPIGLLP--------LFLQLKSLNGDFEGAEK----- 401 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C+ CP +AI K L Sbjct: 402 -----MHLNDCIECGTCSYICPSNRPLVEAIVHAKTQL 434 >gi|294814183|ref|ZP_06772826.1| Putative oxidoreductase [Streptomyces clavuligerus ATCC 27064] gi|326442582|ref|ZP_08217316.1| putative oxidoreductase [Streptomyces clavuligerus ATCC 27064] gi|294326782|gb|EFG08425.1| Putative oxidoreductase [Streptomyces clavuligerus ATCC 27064] Length = 1001 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 25/83 (30%), Gaps = 10/83 (12%) Query: 168 YECVMCACCST--------SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 CV A C T CPSY + + ++ G R + Sbjct: 558 RRCVGVAKCRTEEPGPSSVMCPSYRVTGEEAHSTRGRARLLHEMLAGELVRDGWRSREVR 617 Query: 220 DPFRLYRCHTIMNCTQSCPKGLN 242 D L C C CP G++ Sbjct: 618 DA--LDLCLACKGCRSDCPVGVD 638 >gi|169824043|ref|YP_001691654.1| electron transport complex protein [Finegoldia magna ATCC 29328] gi|167830848|dbj|BAG07764.1| electron transport complex protein [Finegoldia magna ATCC 29328] Length = 442 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 26/98 (26%), Gaps = 18/98 (18%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLD 216 +E + C+ CA C CP + LQ D + Sbjct: 355 MNEKDATLASPEPCIKCAKCVDVCPIGLLP--------LFLQLKSLNGDFEGAEK----- 401 Query: 217 NLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 L C C+ CP +AI K L Sbjct: 402 -----MHLNDCIECGTCSYICPSNRPLVEAIVHAKTQL 434 >gi|163855995|ref|YP_001630293.1| NADH dehydrogenase subunit I [Bordetella petrii DSM 12804] gi|163259723|emb|CAP42024.1| NADH-ubiquinone oxidoreductase, chain I [Bordetella petrii] Length = 162 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++K + + +F+ R + + H R+ +G C+ C C Sbjct: 15 ELLKGMRLTGKYFFK--RKVTLRYPMEKTPISARFRGLHALRRYPNGEERCIACKLCEAV 72 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + D RD+ D L +C C +SCP Sbjct: 73 CPALAITIES---------------DQRDDGTRRTTRYDID---LTKCIFCGFCEESCPV 114 Query: 240 G 240 Sbjct: 115 D 115 >gi|189423933|ref|YP_001951110.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189420192|gb|ACD94590.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 308 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 5/93 (5%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + +C+ C C CP + + + + + Sbjct: 190 YWKEQFSKCIKCYACRQVCPFCFCEQCLCDRNRPQM-----VEQTPRPAGNTAWHLVRAM 244 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 RC C ++CP + K+ L Sbjct: 245 HLAGRCAGCAECERACPMDIPLNLLNRKMAREL 277 >gi|189426179|ref|YP_001953356.1| NADH-quinone oxidoreductase, chain I [Geobacter lovleyi SZ] gi|189422438|gb|ACD96836.1| NADH-quinone oxidoreductase, chain I [Geobacter lovleyi SZ] Length = 135 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 21/127 (16%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMC 173 P P +++ + + + H + + + PK A+ H + +CV C Sbjct: 1 MPNPFTPIMQGMKITLGHVFK--KPVTLMYPDERPKVAERFRGLHA-LKVSHNKAKCVAC 57 Query: 174 ACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNC 233 C T CP+ + A ++ ID RC C Sbjct: 58 YLCPTVCPAKCITVEAGEDANHDKFAAKYEIDML------------------RCIFCGYC 99 Query: 234 TQSCPKG 240 ++CP Sbjct: 100 VEACPVD 106 >gi|187923348|ref|YP_001894990.1| NADH dehydrogenase subunit I [Burkholderia phytofirmans PsJN] gi|187714542|gb|ACD15766.1| NADH-quinone oxidoreductase, chain I [Burkholderia phytofirmans PsJN] Length = 162 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + + H R+ +G C+ C C CP+ + Sbjct: 26 YTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|57234302|ref|YP_181653.1| proton-translocating NADH-quinone oxidoreductase, I subunit [Dehalococcoides ethenogenes 195] gi|57224750|gb|AAW39807.1| proton-translocating NADH-quinone oxidoreductase, I subunit [Dehalococcoides ethenogenes 195] Length = 169 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 18/102 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 PW+ P+ + + Q I C+ C C+ +CP N + Sbjct: 7 HLFRPWITVQYPEEKLTMSKRIRGTQVIWVKETCIACLACARACPVKAINMEV------- 59 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 SR E + ++D++ F L C C +SCP Sbjct: 60 ---------SRGEDRKLKVDHMSIDFGL--CVFCGLCVESCP 90 >gi|297159516|gb|ADI09228.1| NADH dehydrogenase subunit I [Streptomyces bingchenggensis BCW-1] Length = 203 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 12/95 (12%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203 A H+ + DGL +C+ C C+ +CP+ Y+ A + R+ Sbjct: 28 PEEKKPTAPRFHGRHQLNRHPDGLEKCIGCELCAWACPA----DAIYVEGADNTEEERYS 83 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 GER + L RC C ++CP Sbjct: 84 P-------GERYGRVYQINYL-RCILCGLCVEACP 110 >gi|291280505|ref|YP_003497340.1| ferredoxin-dependent glutamate synthase subunit alpha [Deferribacter desulfuricans SSM1] gi|290755207|dbj|BAI81584.1| ferredoxin-dependent glutamate synthase, alpha subunit [Deferribacter desulfuricans SSM1] Length = 546 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 10/93 (10%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-EFQGERLDNLE 219 Q C +C C +CP + + + + + + + + Sbjct: 16 WQIEYKHDRCTLCGRCVAACPFKAI--EARVERRRKVISDDITPNPKVIFQTVPVIKQVV 73 Query: 220 DPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKM 252 D + C C + CP AI ++ Sbjct: 74 DEYNF--CRGCGICEKVCPN-----DAIRPVRN 99 >gi|238062219|ref|ZP_04606928.1| NADH-quinone oxidoreductase, I subunit [Micromonospora sp. ATCC 39149] gi|237884030|gb|EEP72858.1| NADH-quinone oxidoreductase, I subunit [Micromonospora sp. ATCC 39149] Length = 213 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 40/122 (32%), Gaps = 24/122 (19%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 K V SH + + + + K P + DGL +C+ C C+ +CP Sbjct: 8 FKGFGVTFSHMFRKVVTTDYPFKPPVSAPRYHGRHIL--NRHPDGLEKCIGCELCAWACP 65 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY-----RCHTIMNCTQS 236 A ++ D + RL E +Y RC C ++ Sbjct: 66 -----------------ADAIYVEGGDNTEENRLSPGERHASVYQINYARCIFCGLCIEA 108 Query: 237 CP 238 CP Sbjct: 109 CP 110 >gi|229495879|ref|ZP_04389605.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Porphyromonas endodontalis ATCC 35406] gi|229317192|gb|EEN83099.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Porphyromonas endodontalis ATCC 35406] Length = 1181 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 20/82 (24%), Gaps = 17/82 (20%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 + C+ C C+ CP +L A + E + L Sbjct: 685 WKMENCIQCNQCAFVCP--HATIRPFLLDAAEKN-------TTGVATLEAMGKGLKEAGL 735 Query: 225 Y--------RCHTIMNCTQSCP 238 C NC CP Sbjct: 736 GFRIQVDVLDCLGCGNCVNVCP 757 >gi|329944210|ref|ZP_08292469.1| NADH-quinone oxidoreductase, chain I [Actinomyces sp. oral taxon 170 str. F0386] gi|328530940|gb|EGF57796.1| NADH-quinone oxidoreductase, chain I [Actinomyces sp. oral taxon 170 str. F0386] Length = 237 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 14/148 (9%) Query: 91 NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKP 150 D + D + + V +S + + P+ Sbjct: 1 MTDRRPNRSRGSQHDDWLRDAPSAVARAFAPVAGYGVTISSMFRPV--VTEQYPFEPPQV 58 Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 H+ + DGL +C+ C C+ +CP+ Y+ A ++ Sbjct: 59 MPRYHGRHQLNRYDDGLEKCIGCELCAWACPA----DAIYVEAASNEPGAQYSP------ 108 Query: 211 QGERLDNLEDPFRLYRCHTIMNCTQSCP 238 GER + L RC C ++CP Sbjct: 109 -GERYGRVYQINYL-RCIFCGMCIEACP 134 >gi|317178011|dbj|BAJ55800.1| NADH dehydrogenase subunit I [Helicobacter pylori F16] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|301059644|ref|ZP_07200553.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 2 [delta proteobacterium NaphS2] gi|300446290|gb|EFK10146.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 2 [delta proteobacterium NaphS2] Length = 554 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 20/150 (13%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 M +D V+ + + E W V + L + R + CV C C+ Sbjct: 48 GMPNPRDWRVEDDDW----QLPEDWHHIVMEGLKERLHRF---RSLQIFMDICVRCGACA 100 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL------------Y 225 C + + D P + + R + G + + +L + Sbjct: 101 DKCHFFIGSGDPKNMPVLRAELLRSVYRYDFTRAGRIMGKMVGARKLTKAVIREWWYYFF 160 Query: 226 RCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 +C C+ CP G++ A+ I + LL Sbjct: 161 QCSECRRCSLFCPYGIDTAE-ITILGRELL 189 >gi|270294465|ref|ZP_06200667.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275932|gb|EFA21792.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 167 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + K + + + CV C C +CP+ Sbjct: 22 MKTTMTVFCRRKTTEQYPENRSTLKLSDRFRGTLTMPHNDKNEHRCVACGLCQMACPN-- 79 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ ++++ D + + L ++ + L C C +CP Sbjct: 80 ----------DTIKVTGEMVETEDGKKKKIL--VKYEYDLGSCMFCQLCVNACP 121 >gi|261838591|gb|ACX98357.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori 51] gi|317180994|dbj|BAJ58780.1| NADH dehydrogenase subunit I [Helicobacter pylori F32] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|217033589|ref|ZP_03439017.1| hypothetical protein HP9810_899g25 [Helicobacter pylori 98-10] gi|216943935|gb|EEC23369.1| hypothetical protein HP9810_899g25 [Helicobacter pylori 98-10] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|210135427|ref|YP_002301866.1| NADH dehydrogenase subunit I [Helicobacter pylori P12] gi|226737394|sp|B6JNA8|NUOI_HELP2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|210133395|gb|ACJ08386.1| NADH-ubiquinone oxidoreductase chain I [Helicobacter pylori P12] Length = 220 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 19/121 (15%) Query: 118 HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS 177 + + K L + + F+S +I + P + H R G C+ C C Sbjct: 31 GLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCE 89 Query: 178 TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 C S R + + + R L RC C + C Sbjct: 90 KICTSNCI---------------RIITH---KGEDNRKKIDSYTINLGRCIYCGLCAEVC 131 Query: 238 P 238 P Sbjct: 132 P 132 >gi|160891174|ref|ZP_02072177.1| hypothetical protein BACUNI_03621 [Bacteroides uniformis ATCC 8492] gi|317481070|ref|ZP_07940149.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|156859395|gb|EDO52826.1| hypothetical protein BACUNI_03621 [Bacteroides uniformis ATCC 8492] gi|316902783|gb|EFV24658.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 167 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M+ F + + + + K + + + CV C C +CP+ Sbjct: 22 MKTTMTVFCRRKTTEQYPENRSTLKLSDRFRGTLTMPHNDKNEHRCVACGLCQMACPN-- 79 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 ++ ++++ D + + L ++ + L C C +CP Sbjct: 80 ----------DTIKVTGEMVETEDGKKKKIL--VKYEYDLGSCMFCQLCVNACP 121 >gi|150007053|ref|YP_001301796.1| aldo/keto reductase [Parabacteroides distasonis ATCC 8503] gi|149935477|gb|ABR42174.1| aldo/keto reductase [Parabacteroides distasonis ATCC 8503] Length = 464 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 38/133 (28%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +V M H R+ P + + L+ +R C C C CP Sbjct: 323 MVYMEHLQENIRTFSPLEPI--TEQENKALEEVTERMLHSDFVPCTECQYCMP-CPYGLD 379 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 + + S+D + R L R C C C Sbjct: 380 IPGTFAHYNRCVNDELVAKSSQDANYREARRAFLVGYDRKVPKLRQAGHCIGCDKCVPKC 439 Query: 238 PKGLNPAKAIAKI 250 P+G+ + + KI Sbjct: 440 PQGIKIPEQMRKI 452 >gi|6226880|sp|P80269|NDUS8_SOLTU RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=Complex I-28.5kD; Short=CI-28.5kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|668985|emb|CAA59062.1| NADH dehydrogenase [Solanum tuberosum] Length = 229 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 24/123 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L++ + +F+ + +I + + H R+ G C+ C C Sbjct: 82 EMVRGLMLTLKYFFEKKVTINYPFEKG--PLSPRFRGEHALRRYATGEERCIACKLCEAI 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 140 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 179 Query: 238 PKG 240 P Sbjct: 180 PVD 182 >gi|66818078|ref|XP_642732.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium discoideum AX4] gi|60470829|gb|EAL68801.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium discoideum AX4] Length = 210 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++ L + M +F+ + +I + + H R+ G C+ C C Sbjct: 63 EIMWGLYITMGYFFRKKCTINYPFEKG--PLSPRFRGEHALRRYPTGEERCIACKLCEAI 120 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 121 CPAQAITIEAEPRQDGSRRTTRYDIDMT------------------KCIYCGFCQEACPV 162 Query: 240 G 240 Sbjct: 163 D 163 >gi|323694119|ref|ZP_08108298.1| hypothetical protein HMPREF9475_03161 [Clostridium symbiosum WAL-14673] gi|323501836|gb|EGB17719.1| hypothetical protein HMPREF9475_03161 [Clostridium symbiosum WAL-14673] Length = 452 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 13/95 (13%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF--RLY 225 C+ C+ CS CP P + R L D + L+D Sbjct: 253 SACIQCSFCSQLCPRALLG-----HPLKPHRIMRKLASCHDIT-----EILDDSDIRNAA 302 Query: 226 RCHTIMNCT-QSCPKGLNPAKAIAKIKMMLLDRKI 259 C C +CP GL P + +K L + Sbjct: 303 LCCECGICEIFACPMGLQPRRINGILKGELAKAGL 337 >gi|313904002|ref|ZP_07837382.1| glutamate synthase (NADPH), homotetrameric [Eubacterium cellulosolvens 6] gi|313471151|gb|EFR66473.1| glutamate synthase (NADPH), homotetrameric [Eubacterium cellulosolvens 6] Length = 466 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Query: 226 RCHTIMN--CTQSCPKGLNPAKAIAKIKM 252 RC N C + CP +N I +IK Sbjct: 41 RCLNCKNPKCVEGCPVHINIPGFIEQIKN 69 >gi|308270108|emb|CBX26720.1| hypothetical protein N47_A07490 [uncultured Desulfobacterium sp.] Length = 57 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP-KGLNPAKAIAKIKMMLLDRKI 259 + ++ ++D LY C C + CP ++ ++++ R + Sbjct: 6 DEGDRVVEAVQD--GLYECIMCGRCNEVCPAAEIDHLGVYSELRKEAEKRGL 55 >gi|259501865|ref|ZP_05744767.1| cysteine-rich domain protein [Lactobacillus antri DSM 16041] gi|259170190|gb|EEW54685.1| cysteine-rich domain protein [Lactobacillus antri DSM 16041] Length = 134 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 16/104 (15%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 H + + C C C +CP Q ++ +D D Sbjct: 1 MKFSRHTKALAKNIVENCTECGRCMPNCPFLQAYC------QSPKQLFQKFLDDGD---- 50 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLD 256 DP Y C +CT+ CP+ L +A ++ L+ Sbjct: 51 ------IDPEIPYSCLLCSHCTRVCPQQLKLDEAFYSMRKDLIK 88 >gi|240168691|ref|ZP_04747350.1| pyruvate ferredoxin/flavodoxin oxidoreductase family protein [Mycobacterium kansasii ATCC 12478] Length = 1190 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 D + C+ C C+ CP + Y R +S L+ + Sbjct: 682 DLVAVWDPDTCIQCGNCAFVCPHSVIRTTFY-----QQDLLREAPESFPSAP---LNTVG 733 Query: 220 DPFR-------LYRCHTIMNCTQSCPK---GLNPAKAIAKIKMM 253 P + C C ++CP G KAI + Sbjct: 734 LPGARYTLQVYVEDCTGCNLCVEACPAVVPGTPVTKAINLARRE 777 >gi|237722431|ref|ZP_04552912.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_2_4] gi|229448241|gb|EEO54032.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_2_4] Length = 588 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 20/174 (11%), Positives = 43/174 (24%), Gaps = 30/174 (17%) Query: 83 GICGSCGMNIDGTNTLACVKDMK----DIKGAIAVYPLPHMSVIKDLVVDMSHFY----- 133 C C + + G LA + + + + V+ +L++ Sbjct: 52 ASCRICVVEVIGRRNLAPACATRCTEGMVVKTSTLRVMNARKVVAELILSDHPNDCLTCP 111 Query: 134 -------SQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 + + + + +C+ C C + C Sbjct: 112 KCGNCELQTLALRFNIREMPFNGGELSPRKREITASIVRNMDKCIFCRRCESVCNDVQTV 171 Query: 187 SDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 L A R ++ +R+ + + C C CP G Sbjct: 172 G--------ALGAIRRGFNTTIAPAFDRM--MTESE----CTYCGQCVAVCPVG 211 >gi|218261658|ref|ZP_03476393.1| hypothetical protein PRABACTJOHN_02061 [Parabacteroides johnsonii DSM 18315] gi|218223886|gb|EEC96536.1| hypothetical protein PRABACTJOHN_02061 [Parabacteroides johnsonii DSM 18315] Length = 1182 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 4/87 (4%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-LIDSRDEFQ 211 + + C+ C C+ CP + ++ + + ++D + Sbjct: 673 YEKRGVAAFVPVWNEANCIQCNQCAYVCP--HASIRPFVLNDEEQKGANFPMLDVKAPAT 730 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + L C NC CP Sbjct: 731 MKGMKFRMQVDVL-DCLGCGNCADICP 756 >gi|189423928|ref|YP_001951105.1| heterodisulfide reductase subunit [Geobacter lovleyi SZ] gi|189420187|gb|ACD94585.1| heterodisulfide reductase subunit [Geobacter lovleyi SZ] Length = 194 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP--SYWWNSDRYLGPAIL 196 ++ +S + + + + C C CS CP ++ + + + Sbjct: 1 MKKKKMLLSQETMDIAMVRKVEALSGTSVRRCFQCGKCSAGCPMATFMEHPPNRVVRLLQ 60 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 L ++ ++ R ++ C + C+ CP ++ A + ++ + Sbjct: 61 LGQWQRILAGR---------------SIWYCASCETCSTRCPNKVHLASIMDALRKL 102 >gi|329765883|ref|ZP_08257449.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137726|gb|EGG41996.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 184 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 5/75 (6%) Query: 168 YECVMCACCSTSCPS--YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE--DPFR 223 CV C +CP + W P + + + ER D + DP R Sbjct: 76 DSCVADGACIEACPVQVFQWYRTDKDIPNTEALNATF-KGTGSSVKEERKDLTDKADPIR 134 Query: 224 LYRCHTIMNCTQSCP 238 + C M C CP Sbjct: 135 EHDCIWCMACVSVCP 149 >gi|295695743|ref|YP_003588981.1| formate dehydrogenase, alpha subunit [Bacillus tusciae DSM 2912] gi|295411345|gb|ADG05837.1| formate dehydrogenase, alpha subunit [Bacillus tusciae DSM 2912] Length = 991 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 60/206 (29%), Gaps = 31/206 (15%) Query: 49 YVDLDNCGPMVLDGLLYIKNKIDPTLTLRRS-CREGICGSCGMNIDGTNTLAC------- 100 V VL+ LL +I P + S C +C + IDG +C Sbjct: 22 EVRRGRLDRTVLEVLLEQGEEI-PHVCYHPSLGPIQTCDTCLVEIDGELVRSCGVKVTEG 80 Query: 101 ------VKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKEL 154 + ++ + L + + + + + H +++ +P Sbjct: 81 MRIDTRSERVRRARLEAVDRILVNHELYCTVCDNNNGNCVVHNTVKQLGVQHQREPFSPK 140 Query: 155 LQSHEDRQKIDGLY--ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 +D +C++C C +C + N + ++ R + D Sbjct: 141 PYDVDDTNPFYRYDPNQCILCGRCVEACQNLQVNETLSIDWSLERP--RVVWDGGVPIDQ 198 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCP 238 C + +C CP Sbjct: 199 S------------SCVSCGHCVTVCP 212 >gi|257054400|ref|YP_003132232.1| NADH dehydrogenase subunit I [Saccharomonospora viridis DSM 43017] gi|256584272|gb|ACU95405.1| NADH dehydrogenase subunit I [Saccharomonospora viridis DSM 43017] Length = 187 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 14/120 (11%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 IK V + + + + E A H+ + DGL +CV C C+ Sbjct: 4 FDPIKGFGVTFATMFKKVATEEY--PEAGAPAAPRYHGRHQLNRHPDGLEKCVGCELCAW 61 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +CP+ Y+ + R+ GER L RC C ++CP Sbjct: 62 ACPA----DAIYVEGGDNTEEARYSP-------GERYGKNYQINYL-RCIGCGLCVEACP 109 >gi|254439108|ref|ZP_05052602.1| NADH-quinone oxidoreductase, chain I subfamily [Octadecabacter antarcticus 307] gi|198254554|gb|EDY78868.1| NADH-quinone oxidoreductase, chain I subfamily [Octadecabacter antarcticus 307] Length = 168 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 34/120 (28%), Gaps = 24/120 (20%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 K + +F++ + + H R+ +G C+ C C CP+ Sbjct: 24 KGFRLGFKYFFAP--KVTLNYPHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPA 81 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 QA + RD+ R D C C ++CP Sbjct: 82 ---------------QAITIDAEPRDDGSRRTTRYDIDMTK-----CIYCGFCEEACPVD 121 >gi|194366596|ref|YP_002029206.1| NADH dehydrogenase subunit I [Stenotrophomonas maltophilia R551-3] gi|194349400|gb|ACF52523.1| NADH-quinone oxidoreductase, chain I [Stenotrophomonas maltophilia R551-3] Length = 162 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 28/103 (27%), Gaps = 18/103 (17%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + H R+ +G C+ C C CP+ D Sbjct: 31 KYTMMYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTR 90 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L++C C +SCP Sbjct: 91 RTTRYDID------------------LFKCIFCGFCEESCPVD 115 >gi|86157600|ref|YP_464385.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774111|gb|ABC80948.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 409 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 20/74 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C+T+CP + D L D R C Sbjct: 170 FLRQRFCATACPYAKLQGVLF-----------------DRST---LVVAYDAGRAADCVD 209 Query: 230 IMNCTQSCPKGLNP 243 C + CP G++ Sbjct: 210 CGACVRVCPTGIDI 223 >gi|305665372|ref|YP_003861659.1| putative iron-sulfur protein [Maribacter sp. HTCC2170] gi|88710127|gb|EAR02359.1| probable iron-sulfur protein [Maribacter sp. HTCC2170] Length = 472 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 19/68 (27%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C +CP +I++ + + R + D C C Sbjct: 218 CIIACPYGRMQGVLLDNKSIIVAYDHKRGEGESGRKKIRKNEDRDALGHGDCIDCKQCVH 277 Query: 236 SCPKGLNP 243 CP ++ Sbjct: 278 VCPTNIDI 285 >gi|77463081|ref|YP_352585.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides 2.4.1] gi|126461953|ref|YP_001043067.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17029] gi|221638937|ref|YP_002525199.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides KD131] gi|332557954|ref|ZP_08412276.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] gi|115502510|sp|Q3J3F0|NUOI1_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|156632691|sp|A3PIX9|NUOI1_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|77387499|gb|ABA78684.1| Subunit of NADH-ubiquinone oxidoreductase (Complex I) that contains 2 Fe-S centers [Rhodobacter sphaeroides 2.4.1] gi|126103617|gb|ABN76295.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17029] gi|221159718|gb|ACM00698.1| NADH-quinone oxidoreductase subunit I 1 [Rhodobacter sphaeroides KD131] gi|332275666|gb|EGJ20981.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] Length = 167 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 20/119 (16%) Query: 122 IKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 IK + M +F++ ++ + H R+ +G C+ C C CP Sbjct: 22 IKGFGLGMKYFFAPKHTVNY--PHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCP 79 Query: 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + D + R+ ID +C C ++CP Sbjct: 80 AQAITIDAEPREDGSRRTTRYDIDMT------------------KCIYCGFCQEACPVD 120 >gi|311696283|gb|ADP99156.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [marine bacterium HP15] Length = 1199 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 4/78 (5%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 CV C C+ CP S + ++ + + E Q L+ L+ ++ Sbjct: 689 WESDLCVQCNFCAMICPHTAITSKVFEPESVKGAPEAFEVVP--ETQTSELEGLDYRIQV 746 Query: 225 --YRCHTIMNCTQSCPKG 240 C C + CP Sbjct: 747 APDDCTGCGLCVEVCPAK 764 >gi|307108270|gb|EFN56510.1| hypothetical protein CHLNCDRAFT_34957 [Chlorella variabilis] Length = 677 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 14/75 (18%) Query: 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY 225 L +C+ C C T C + + SR G ++ D + Sbjct: 185 DLEKCIKCGRCVTMCGQVQ-----------QMNVLGMINRSRMAHPGVLIEEALDHSK-- 231 Query: 226 RCHTIMNCTQSCPKG 240 C C+ CP G Sbjct: 232 -CIECGQCSSVCPVG 245 >gi|260597691|ref|YP_003210262.1| formate hydrogenlyase complex iron-sulfur subunit [Cronobacter turicensis z3032] gi|260216868|emb|CBA30405.1| Formate hydrogenlyase subunit 6 [Cronobacter turicensis z3032] Length = 180 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L D L+ F L RC Sbjct: 39 QCIGCAACINACPSNALTVETDLEH----------------------DRLDWQFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|289804003|ref|ZP_06534632.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 154 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L A A+++ L RC Sbjct: 39 QCIGCAACVNACPSNALTVETDL--ATNELAWQFN--------------------LGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|154174150|ref|YP_001408944.1| iron-sulfur cluster-binding domain-containing protein [Campylobacter curvus 525.92] gi|153793054|gb|EAU01433.2| iron-sulfur cluster-binding domain protein [Campylobacter curvus 525.92] Length = 568 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 27/103 (26%), Gaps = 26/103 (25%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I +L SP + +++ +C C CPS + Sbjct: 185 EILEFLNAHSPSYPYKSFITYDSSICQYHERREEICGRCVEVCPSVAILKE--------- 235 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 DE + +++ C C CP G Sbjct: 236 ----------DETKHLVFSHID-------CVNCGECVSVCPSG 261 >gi|34556904|ref|NP_906719.1| NADH oxidoreductase I [Wolinella succinogenes DSM 1740] gi|34482619|emb|CAE09619.1| NADH OXIDOREDUCTASE I [Wolinella succinogenes] Length = 309 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 57/216 (26%), Gaps = 22/216 (10%) Query: 44 CMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTL--RRSCREGICGSCGMNIDGTNTLACV 101 +D V + ++ + P + R S C C + DG AC Sbjct: 7 WIDEREVRCEEGEYLLQVA--RARGIFIPAICYLSRCSPTLA-CKLCMVEADGKRVYACN 63 Query: 102 KDMKDIKGAIAVYPLP-------------HMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP 148 K+ P + + + Q+ ++E + T Sbjct: 64 AKTKEGMRVYTKTPEILEERRAIMQVYDINHPLECGVCDKSGECELQNYTLEMGVYTQDY 123 Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 + Q + C++C C T C +++ + L DS Sbjct: 124 SIRDSSKEKATWGQALYDPNLCIVCERCVTVCKDMVGSANLKTIKRDADAPAKELKDSMP 183 Query: 209 EFQ----GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + +L C C CP G Sbjct: 184 KDAYGVWNKMSKSLIGHVGEEDCTDCGECISVCPVG 219 >gi|332880411|ref|ZP_08448085.1| pyruvate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681399|gb|EGJ54322.1| pyruvate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 1182 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 31/109 (28%), Gaps = 8/109 (7%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + C+ C C+ CP + ++ A ++ + + Sbjct: 673 YEKRGVAAFVPTWNADNCIQCNKCAYVCP--HASIRPFVLDAEEMKG--FNAPVIEMKAP 728 Query: 213 ERLDNLED--PFRLYRCHTIMNCTQSCPKGLNPAKAI--AKIKMMLLDR 257 + + + C NC CP KA+ ++ L + Sbjct: 729 AAMKGMNFRIQVSVMDCLGCGNCADVCPGNPKLGKALTMVPLEQELAEA 777 >gi|330830388|ref|YP_004393340.1| ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase [Aeromonas veronii B565] gi|328805524|gb|AEB50723.1| ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase [Aeromonas veronii B565] Length = 1191 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 5/77 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C CP + Y A +A + + + F R P Sbjct: 689 WHSDICIQCGNCVFVCPHAALRAKFYHQDWLATAPEAAQSVPVTAKGFPDSRYTLQLYPE 748 Query: 223 RLYRCHTIMNCTQSCPK 239 C C Q+CP Sbjct: 749 ---DCTGCGQCVQACPV 762 >gi|324497291|gb|ADY39446.1| formate hydrogenlyase complex iron-sulfur subunit [bacterium enrichment culture clone P24-9H] Length = 180 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 22/102 (21%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 + I+ +T S + + + +C+ CA C +CPS + L L Sbjct: 7 KVIKTGTQTSSYPLEPMPVDKNFRGKPEHNPQQCIGCAACVNACPSNALTVETDLKTGEL 66 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 F L RC C + CP Sbjct: 67 AWQ----------------------FNLGRCIFCGRCEEVCP 86 >gi|308270556|emb|CBX27168.1| Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 [uncultured Desulfobacterium sp.] Length = 539 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 13/107 (12%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW-----------LIDSRDE 209 R + CV C C+ C + D P + + R + Sbjct: 85 RSFKVFMDICVRCGACADKCHFFIGTGDPKNMPVLRAELLRSVYRNDFTTAGKIFGKVAG 144 Query: 210 FQGERLDNLEDP-FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 + LD L++ + ++C C+ CP G++ A+ I + + Sbjct: 145 AREMTLDVLKEWWYYFFQCTECRRCSVFCPYGIDTAE-ITIMAREIF 190 >gi|298377474|ref|ZP_06987426.1| aldo/keto reductase [Bacteroides sp. 3_1_19] gi|298265493|gb|EFI07154.1| aldo/keto reductase [Bacteroides sp. 3_1_19] Length = 466 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 38/133 (28%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 +V M H R+ P + + L+ +R C C C CP Sbjct: 325 MVYMEHLQENIRTFSPLEPI--TEQENKALEEVTERMLHSDFVPCTECQYCMP-CPYGLD 381 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 + + S+D + R L R C C C Sbjct: 382 IPGTFAHYNRCVNDELVAKSSQDANYREARRAFLVGYDRKVPKLRQAGHCIGCDKCVPKC 441 Query: 238 PKGLNPAKAIAKI 250 P+G+ + + KI Sbjct: 442 PQGIKIPEQMRKI 454 >gi|289596655|ref|YP_003483351.1| Formate dehydrogenase [Aciduliprofundum boonei T469] gi|289534442|gb|ADD08789.1| Formate dehydrogenase [Aciduliprofundum boonei T469] Length = 355 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 7/87 (8%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 D L C+ C C CP + + ++ + D+ G RL + F Sbjct: 222 EDFLSSCLNCHNCKDMCPICFCKECFFEDHSVFDYESNKFYNWADDKDGIRLPTDKSLFH 281 Query: 224 LYR-------CHTIMNCTQSCPKGLNP 243 + R C C Q+CP + Sbjct: 282 IGRLIHMGTSCVGCGLCQQACPMDIPL 308 >gi|257058012|ref|YP_003135900.1| bidirectional hydrogenase complex protein HoxU [Cyanothece sp. PCC 8802] gi|256588178|gb|ACU99064.1| ferredoxin [Cyanothece sp. PCC 8802] Length = 238 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 37/164 (22%), Gaps = 17/164 (10%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL--PHMSVIKDLVVDMSHFYSQHR 137 + +C I + + +A+ L V VV+ + Sbjct: 56 GSSKLQPACVTQIQEEMVVHTNTEKLQEYRRMAIELLFAEGNHVCAVCVVNGNCELQSMA 115 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW-WNSDRYLGPAIL 196 + P + Q C++C C C + Sbjct: 116 VKLGMDHSRFPYQFPDRKIDVSHPQFGIDHNRCILCTRCVRVCDEIEGAHVWDVANRGGN 175 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C + C ++CP G Sbjct: 176 SFIVSGINQPWGD--------------VDACTSCGKCVEACPTG 205 >gi|197121645|ref|YP_002133596.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196171494|gb|ACG72467.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 409 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 20/74 (27%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 + C+T+CP + D L D R C Sbjct: 170 FLRQRFCATACPYAKLQGVLF-----------------DRST---LVVAYDARRAQDCVD 209 Query: 230 IMNCTQSCPKGLNP 243 C + CP G++ Sbjct: 210 CGACVRVCPTGIDI 223 >gi|167751835|ref|ZP_02423962.1| hypothetical protein ALIPUT_00077 [Alistipes putredinis DSM 17216] gi|167660076|gb|EDS04206.1| hypothetical protein ALIPUT_00077 [Alistipes putredinis DSM 17216] Length = 1180 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 22/89 (24%), Gaps = 6/89 (6%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL-IDSRDEFQ 211 + + +C+ C C+ CP +L A + + Sbjct: 681 WEKRGIAVNVPEWQVDKCIQCNQCAYVCP--HAVIRPFLATETEAAASGTEWKQGLGDTK 738 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + P C NC CP Sbjct: 739 EYKFRIQISPL---DCTGCSNCVDVCPAK 764 >gi|154508535|ref|ZP_02044177.1| hypothetical protein ACTODO_01036 [Actinomyces odontolyticus ATCC 17982] gi|153798169|gb|EDN80589.1| hypothetical protein ACTODO_01036 [Actinomyces odontolyticus ATCC 17982] Length = 1008 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 32/125 (25%), Gaps = 13/125 (10%) Query: 124 DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS---- 179 +L + R + + ++ C C Sbjct: 527 ELQPGIDSLDRNLRRVAAQPMPADGGFSFTHDGGD----FTAAVHRCTGVGKCRAVVSGT 582 Query: 180 --CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSC 237 CPSY + + + +S+ + + L L C C+ C Sbjct: 583 FMCPSYLATREEKDVTRGRARILQEAANSQLVKAIDSPEVL---EALDLCLACKACSADC 639 Query: 238 PKGLN 242 P G++ Sbjct: 640 PAGVD 644 >gi|94676995|ref|YP_588861.1| pyruvate-flavodoxin oxidoreductase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220145|gb|ABF14304.1| Pyruvate-flavodoxin oxidoreductase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 1163 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 9/90 (10%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA---YRWL-IDSRD 208 ++ + I C C C +CP + + + P L A +++ R Sbjct: 672 WEKRNIAETIPIWTAELCTQCNYCVAACP-HAAIRAKVVAPTALDGAPTSLKFIDAKMRH 730 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + + L + C C + CP Sbjct: 731 MYGQKYLLQVAPED----CTGCGLCVKVCP 756 >gi|41409307|ref|NP_962143.1| NADH dehydrogenase subunit I [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466656|ref|YP_883193.1| NADH dehydrogenase subunit I [Mycobacterium avium 104] gi|254776463|ref|ZP_05217979.1| NADH dehydrogenase subunit I [Mycobacterium avium subsp. avium ATCC 25291] gi|81700407|sp|Q73V07|NUOI2_MYCPA RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|156633525|sp|A0QJV5|NUOI_MYCA1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|41398127|gb|AAS05757.1| NuoI_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167943|gb|ABK68840.1| NADH-quinone oxidoreductase chain 1 [Mycobacterium avium 104] Length = 181 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 14/114 (12%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 V + + +H + A H+ + DGL +C+ C C+ +CP+ Sbjct: 11 FGVTFASMFKKH--VTEEYPEKPGPVAPRYHGRHQLNRYPDGLEKCIGCELCAWACPA-- 66 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 Y+ A + R+ GER + L RC C ++CP Sbjct: 67 --DAIYVEGADNTEELRYSP-------GERYGRVYQINYL-RCIGCGLCVEACP 110 >gi|283853030|ref|ZP_06370287.1| hydrogenase, putative [Desulfovibrio sp. FW1012B] gi|283571567|gb|EFC19570.1| hydrogenase, putative [Desulfovibrio sp. FW1012B] Length = 349 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 32/126 (25%) Query: 157 SHEDRQKIDGLYECVMCACCSTSCPSYW--WNSDRYLGPAIL-LQAYRWLID-------- 205 + D +C+ C C+ CP+ + +D G ++++ + Sbjct: 228 FDDMDFWRDQSDKCISCGACTYLCPTCYCFTITDEPAGMKGRRMRSWDACMHFQFTLEAS 287 Query: 206 ---SRDEFQGERLDNLEDP---------FRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 R + RL N L C C +SCP ++ Sbjct: 288 GHNPRPT-KAHRLKNRVGHKFSYYPTLHDGLIACCGCGRCVKSCPVSVDI--------RE 338 Query: 254 LLDRKI 259 ++ + Sbjct: 339 IVQNAV 344 >gi|255281565|ref|ZP_05346120.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Bryantella formatexigens DSM 14469] gi|255268053|gb|EET61258.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Bryantella formatexigens DSM 14469] Length = 1179 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 16/74 (21%), Gaps = 3/74 (4%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C CS CP G + + Sbjct: 688 WNPDNCIQCNRCSYVCPHAVIRPIALTEEEAAAAPEGMKTLPMTGMAGYKFAMVVSA--- 744 Query: 225 YRCHTIMNCTQSCP 238 Y C +C CP Sbjct: 745 YDCTGCGSCANVCP 758 >gi|218678471|ref|ZP_03526368.1| NADH dehydrogenase subunit I [Rhizobium etli CIAT 894] Length = 160 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 19/116 (16%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 + M +F+ Q +I + + H R+ +G C+ C C CP+ Sbjct: 17 FFLSMRYFFRQKATINYPFEKG--PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQA 74 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + GP R + D + C C ++CP Sbjct: 75 ITIEA--GPRRNDGTRRTVRYDIDMVK---------------CIYCGFCQEACPVD 113 >gi|28869202|ref|NP_791821.1| FixG-like protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967521|ref|ZP_03395669.1| FixG-related protein [Pseudomonas syringae pv. tomato T1] gi|301386484|ref|ZP_07234902.1| FixG-related protein [Pseudomonas syringae pv. tomato Max13] gi|302062816|ref|ZP_07254357.1| FixG-related protein [Pseudomonas syringae pv. tomato K40] gi|302131315|ref|ZP_07257305.1| FixG-related protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852442|gb|AAO55516.1| FixG-related protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927822|gb|EEB61369.1| FixG-related protein [Pseudomonas syringae pv. tomato T1] Length = 470 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + +++ + R + E + L C C Q Sbjct: 222 CIYMCPYARFQSVMFDKDTLVISYDPRRGEPRGPRKKETDHQAQ---GLGDCIDCTLCVQ 278 Query: 236 SCPKGLNPAK 245 CP G++ Sbjct: 279 VCPTGIDIRD 288 >gi|33597903|ref|NP_885546.1| NADH dehydrogenase subunit I [Bordetella parapertussis 12822] gi|33574332|emb|CAE38668.1| NADH-ubiquinone oxidoreductase, chain I [Bordetella parapertussis] Length = 147 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 20/120 (16%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + K L + +F+ R + + H R+ +G C+ C C C Sbjct: 1 MFKGLRLTGKYFFK--RKVTLRYPMEKTPTSARFRGLHALRRYPNGEERCIACKLCEAVC 58 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P+ + + R+ ID L +C C +SCP Sbjct: 59 PALAITIESEQRDDGTRRTTRYDID------------------LTKCIFCGFCEESCPVD 100 >gi|326387453|ref|ZP_08209062.1| NADH dehydrogenase subunit I [Novosphingobium nitrogenifigens DSM 19370] gi|326208109|gb|EGD58917.1| NADH dehydrogenase subunit I [Novosphingobium nitrogenifigens DSM 19370] Length = 161 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 22/97 (22%) Query: 146 VSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205 + H R+ +G C+ C C CP+ QA + Sbjct: 38 EKNPISPRFRGEHALRRYPNGEERCIACKLCEAVCPA---------------QAITIEAE 82 Query: 206 SRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 RD+ R D C C ++CP Sbjct: 83 PRDDGSRRTTRYDIDMTK-----CIFCGFCQEACPVD 114 >gi|323477038|gb|ADX82276.1| Fe-S oxidoreductase-like protein [Sulfolobus islandicus HVE10/4] Length = 423 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 23/107 (21%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPA---------------ILLQAYRWLIDSRDE 209 G+ C+ C CS SCP + Y PA R+L R Sbjct: 38 MGIENCMRCGICSYSCPFWLETKKFYDVPAWRTYEINKIYSMFYTGYGIVARYLKLRRIS 97 Query: 210 FQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN--PAKAIAKIKMML 254 + Y C CT + P + I ++ +L Sbjct: 98 GNEFK----HWTESAYDCTACGACTYTSPMEVPNWYTAII--MRRIL 138 >gi|313836208|gb|EFS73922.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL037PA2] gi|314927643|gb|EFS91474.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL044PA1] gi|314971358|gb|EFT15456.1| NADH-quinone oxidoreductase, chain I [Propionibacterium acnes HL037PA3] gi|328906295|gb|EGG26070.1| NADH-quinone oxidoreductase, chain I [Propionibacterium sp. P08] Length = 198 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M + + + + K + H+ + DGL +CV C C+ Sbjct: 1 MGAWSGFGITFETMFRKPFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW 60 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQ 235 +CP+ + D+ DE + GER + + L RC C + Sbjct: 61 ACPADAIYVEG--------------ADNTDEERYSPGERYGRVYEINYL-RCILCGMCIE 105 Query: 236 SCP 238 +CP Sbjct: 106 ACP 108 >gi|260948246|ref|XP_002618420.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238848292|gb|EEQ37756.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 219 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 + + + + M ++ + + H R+ G C+ C C Sbjct: 72 EIARGMYICMEMYFR--SPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 129 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + Y++ ID +C C +SCP Sbjct: 130 CPAQAITIEAEERIDGSRRTYKYDIDMT------------------KCIYCGYCQESCPV 171 Query: 240 G 240 Sbjct: 172 D 172 >gi|219851239|ref|YP_002465671.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanosphaerula palustris E1-9c] gi|219545498|gb|ACL15948.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanosphaerula palustris E1-9c] Length = 413 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 15/144 (10%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A + + GAIA P P K + + + + + W + + + Sbjct: 229 ADLLTRAEQAGAIATEPAPA----KGIEIRGKIEGAMLKLGDKWRAKDFTELGQGQTRLE 284 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C+ C C +CP + PA++ I F R ++ Sbjct: 285 K---IMKATARCIKCYSCIEACPICYCVDCSTKNPALVTPG---EIPPNFMFHLIRYAHI 338 Query: 219 EDPFRLYRCHTIMNCTQSCPKGLN 242 D C C + CP + Sbjct: 339 SD-----SCVNCGQCEELCPAEIP 357 >gi|5650750|emb|CAB51635.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium meliloti] Length = 853 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 54/213 (25%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKD 103 + V+ G VL + +I +R C C + I+G L AC Sbjct: 9 QSLEVEA---GSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATV 65 Query: 104 MKDIKGAIAVYPLPHMSVIKDL------------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 D PL + L + D + + S Sbjct: 66 AADGMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + +D + I + C+ C C C + A + Sbjct: 126 PKRVFHSKDIRLSPVIIMNVNRCIQCQRCVRMCEEV-----------VGAVALGTVEKGM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|260060763|ref|YP_003193843.1| iron-sulfur cluster-binding protein [Robiginitalea biformata HTCC2501] gi|88784893|gb|EAR16062.1| iron-sulfur cluster-binding protein [Robiginitalea biformata HTCC2501] Length = 471 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 8/72 (11%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF----RLYRCHTIM 231 C +CP Y L ++ AY + R E + R + C + Sbjct: 217 CIIACP-YGRMQGVLLDEKSVVVAYDY---KRGEAEKGRKKFRKGEDRQALGYGDCIDCL 272 Query: 232 NCTQSCPKGLNP 243 C CP G++ Sbjct: 273 QCVHVCPTGIDI 284 >gi|238782630|ref|ZP_04626661.1| Pyruvate-flavodoxin oxidoreductase [Yersinia bercovieri ATCC 43970] gi|238716557|gb|EEQ08538.1| Pyruvate-flavodoxin oxidoreductase [Yersinia bercovieri ATCC 43970] Length = 1177 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 3/89 (3%) Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD-EFQ 211 ++ + I C C C +CP + P + + S D + + Sbjct: 672 WEKRNIAENIPIWQPDLCTQCNHCVAACP--HSAIRAKVIPPDAMAGAPESLQSLDVKAR 729 Query: 212 GERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R C C + CP Sbjct: 730 DMRGQKYVLQVAPEDCTGCNLCYEVCPAK 758 >gi|333001063|gb|EGK20633.1| formate hydrogenlyase subunit 6 [Shigella flexneri K-272] gi|333015432|gb|EGK34771.1| formate hydrogenlyase subunit 6 [Shigella flexneri K-227] Length = 180 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + L L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVETDLPTGELAW----------------------EFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|325856666|ref|ZP_08172304.1| putative iron-sulfur cluster-binding protein [Prevotella denticola CRIS 18C-A] gi|325483380|gb|EGC86355.1| putative iron-sulfur cluster-binding protein [Prevotella denticola CRIS 18C-A] Length = 365 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 71/238 (29%), Gaps = 32/238 (13%) Query: 20 APTGEKNLKEYRIYRW--NPDNKGNPCMDTYYVDLDNCGPMV--LDGLLYIKNKIDPTLT 75 P E ++YR RW N + M Y + +V + ++ + P+ Sbjct: 80 GPVDESTAQQYR--RWLDNGEEASMAYMANYQEKRLDPRLLVPGVRSIISLALNYAPS-- 135 Query: 76 LRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP-----HMSVIKDLVVDMS 130 R + + L K K + PLP + D + Sbjct: 136 -RLLPEGEYQFAAYALGQDYHNLMKEKMRKLAEEIENQQPLPLEEDLSIRCFCDTAPVLE 194 Query: 131 HFYSQHRSIEPWLKTVSPKPAKE----------LLQSHEDRQKIDGLYECVMCACCSTSC 180 +++Q ++ W+ + D C C C +C Sbjct: 195 RYWAQ-KAGLGWVGRNHQLIIPHAGSMFFLGEIFIPFDVDAYDEPMPNRCGNCHRCIDAC 253 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 P++ A +Y+ + ++R E E + D +Y C C +CP Sbjct: 254 PTHAIVPGE-DFHARRCLSYQLI-ENRGELSEEAKAAMGDT--IYGCD---RCQTACP 304 >gi|308274678|emb|CBX31277.1| hypothetical protein N47_E47890 [uncultured Desulfobacterium sp.] Length = 1155 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 11/121 (9%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + F+ + A + + C C C+ C Sbjct: 74 CLRKGLFHENIEILPSTDLMSVEGEAGQFKVTIRQHLNWVDPNLCTGCGYCADVCQV--E 131 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG-LNPA 244 D++ +A +L +D C C + CP G +N Sbjct: 132 IPDKFNENIGTHKAV-YLPVPHAIPNPYIID-------FTSCTRCGACIKVCPTGAINLP 183 Query: 245 K 245 + Sbjct: 184 Q 184 >gi|284007432|emb|CBA72869.1| putative pyruvate-flavodoxin oxidoreductase [Arsenophonus nasoniae] Length = 1180 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 31/121 (25%), Gaps = 12/121 (9%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCP---SYWWNSDRYLGPAILLQAYRWL 203 K ++ + I C C C +CP + + A Sbjct: 673 PTGTTKWEKRNIAETIPIWLPDLCTQCNYCVAACPHAAIRAKVTSAEILKAAPASLPSLA 732 Query: 204 IDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK-----MMLLDRK 258 + SRD + + C C + CP I I L+ K Sbjct: 733 VKSRDMRGLNYVLQVAPED----CTGCNLCYEVCPAKDRQNPQIRAINMQPRVEHLIAEK 788 Query: 259 I 259 I Sbjct: 789 I 789 >gi|170741704|ref|YP_001770359.1| ferredoxin III, nif-specific [Methylobacterium sp. 4-46] gi|168195978|gb|ACA17925.1| ferredoxin III, nif-specific [Methylobacterium sp. 4-46] Length = 104 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 23/85 (27%), Gaps = 2/85 (2%) Query: 155 LQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGER 214 D C+ C C C + A R + DEF G+ Sbjct: 9 RAWMPDYLVAIDAKTCIGCGRCYKVCS--RDVMHLFGVGAENALLGRVGDEDDDEFDGKL 66 Query: 215 LDNLEDPFRLYRCHTIMNCTQSCPK 239 + + C C + CPK Sbjct: 67 VRKVMVVDEAGACIGCGACARVCPK 91 >gi|16263281|ref|NP_436074.1| NuoG2 NADH I chain G 2 [Sinorhizobium meliloti 1021] gi|17380454|sp|P56914|NUOG2_RHIME RecName: Full=NADH-quinone oxidoreductase subunit G 2; AltName: Full=NADH dehydrogenase I subunit G 2; AltName: Full=NDH-1 subunit G 2 gi|14523958|gb|AAK65486.1| NuoG2 NADH:quinone oxidoreductase subunit 7 (chain G2) [Sinorhizobium meliloti 1021] Length = 853 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 54/213 (25%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKD 103 + V+ G VL + +I +R C C + I+G L AC Sbjct: 9 QSLEVEA---GSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATV 65 Query: 104 MKDIKGAIAVYPLPHMSVIKDL------------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 D PL + L + D + + S Sbjct: 66 AADGMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + +D + I + C+ C C C + A + Sbjct: 126 PKRVFHSKDIRLSPVIIMNVNRCIQCQRCVRMCEEV-----------VGAVALGTVEKGM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|328947025|ref|YP_004364362.1| Ferredoxin hydrogenase [Treponema succinifaciens DSM 2489] gi|328447349|gb|AEB13065.1| Ferredoxin hydrogenase [Treponema succinifaciens DSM 2489] Length = 492 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 19/121 (15%) Query: 143 LKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRW 202 DR+ C+ C C +CP + P +A Sbjct: 121 CYARPCMVNCPRKAITVDRRATIDEKLCINCGKCMENCPYHSIIK----IPVPCEEACPV 176 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMML 254 S+DE E++D ++C NC + CP G ++ K I K ++ Sbjct: 177 GAISKDEKGHEKIDY-------HKCIFCGNCMRECPFGAMMDKSQLVDVIKHIMNCKKVV 229 Query: 255 L 255 Sbjct: 230 A 230 >gi|319943356|ref|ZP_08017638.1| NADH-quinone oxidoreductase subunit I [Lautropia mirabilis ATCC 51599] gi|319743171|gb|EFV95576.1| NADH-quinone oxidoreductase subunit I [Lautropia mirabilis ATCC 51599] Length = 162 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + + Sbjct: 30 RKITVQYPEQKTPLSPRFRGLHALRRYSNGEERCIACKLCEAVCPAMAITIESAVRADGQ 89 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 90 RRTTRYDID------------------LTKCIFCGLCEESCPVD 115 >gi|307304400|ref|ZP_07584151.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Sinorhizobium meliloti BL225C] gi|306902602|gb|EFN33196.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Sinorhizobium meliloti BL225C] Length = 853 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 54/213 (25%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKD 103 + V+ G VL + +I +R C C + I+G L AC Sbjct: 9 QSLEVEA---GSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATV 65 Query: 104 MKDIKGAIAVYPLPHMSVIKDL------------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 D PL + L + D + + S Sbjct: 66 AADGMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + +D + I + C+ C C C + A + Sbjct: 126 PKRVFHSKDIRLSPVIIMNVNRCIQCQRCVRMCEEV-----------VGAVALGTVEKGM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|296415821|ref|XP_002837584.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633457|emb|CAZ81775.1| unnamed protein product [Tuber melanosporum] Length = 232 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 24/153 (15%) Query: 88 CGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVS 147 G+ + T + D G I + +++ + V + F+ Sbjct: 57 SGLRTNRTPNWEEGESALDKAGRIFLMTE----MLRGMYVVLEQFFR--APYTIMYPFEK 110 Query: 148 PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + H R+ G C+ C C CP+ + + R+ ID Sbjct: 111 GPISPRFRGEHALRRYPSGEERCIACKLCEAICPALAITIEAEEREDGSRRTTRYDIDMT 170 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +C C +SCP Sbjct: 171 ------------------KCIYCGFCQESCPVD 185 >gi|295087525|emb|CBK69048.1| hydrogenases, Fe-only [Bacteroides xylanisolvens XB1A] Length = 599 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 51/208 (24%), Gaps = 35/208 (16%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCRE-----GICGSCGMNIDGTNTLACVKDMK--- 105 G +L+ + I I + C C + + G LA + Sbjct: 29 PEGSTILEAAIKIGINIPTLCHIDLKGTCIKNNPASCRICVVEVMGRRNLAPACATRCTE 88 Query: 106 -DIKGAIAVYPLPHMSVIKDLVVDMSHFY------------SQHRSIEPWLKTVSPKPAK 152 + + + V+ +L++ + Sbjct: 89 GMVVKTSTLRVMNARKVVAELILSDHPNDCLTCPKCGNCELQTLALRFNIREMPFNGGEL 148 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + + +C+ C C + C L A R ++ Sbjct: 149 SPRKREITASIVRNMDKCIFCRRCESVCNDVQTVG--------ALGAIRRGFNTTIAPAF 200 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +R+ + + C C CP G Sbjct: 201 DRM--MTESE----CTYCGQCVAVCPVG 222 >gi|238749375|ref|ZP_04610880.1| Pyruvate-flavodoxin oxidoreductase [Yersinia rohdei ATCC 43380] gi|238712030|gb|EEQ04243.1| Pyruvate-flavodoxin oxidoreductase [Yersinia rohdei ATCC 43380] Length = 1177 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 9/94 (9%) Query: 151 AKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEF 210 + ++ + + C C C +CP + + + P L A DS Sbjct: 670 TQWEKRNIAENIPLWQPDLCTQCNHCVAACP-HSAIRAKVVPPEALSGA----PDSLQSL 724 Query: 211 QGERLDNLEDPFRLY----RCHTIMNCTQSCPKG 240 + D + L C C + CP Sbjct: 725 DVKARDMRGQKYILQVAPEDCTGCNLCYEVCPAK 758 >gi|257064349|ref|YP_003144021.1| hydrogenase, Fe-only [Slackia heliotrinireducens DSM 20476] gi|256792002|gb|ACV22672.1| hydrogenase, Fe-only [Slackia heliotrinireducens DSM 20476] Length = 569 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 38/163 (23%), Gaps = 16/163 (9%) Query: 79 SCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRS 138 C + SC N+ + + L + + Sbjct: 51 DCDGELVPSCNTNVREGMVIKTGTPRVVAARKANIETLMESHRGECSSCVRQETCALRAL 110 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW-NSDRYLGPAILL 197 + S E ED I +C+ C C C + + + GP + Sbjct: 111 ASDFNVGESAYCLPEKGIWDEDFPLIRDASKCIKCMRCVAECSKVQYCSVWEHSGPGPHM 170 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 ++ D D C C CP G Sbjct: 171 NV--FVKDGL----------AIDAAG---CALCGQCITHCPTG 198 >gi|212704088|ref|ZP_03312216.1| hypothetical protein DESPIG_02143 [Desulfovibrio piger ATCC 29098] gi|212672448|gb|EEB32931.1| hypothetical protein DESPIG_02143 [Desulfovibrio piger ATCC 29098] Length = 298 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 16/69 (23%), Gaps = 27/69 (39%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 CV C C CP+ RD + C Sbjct: 55 CVSCGACMQVCPNGAVVPLENGKM------------GRDTEK---------------CTH 87 Query: 230 IMNCTQSCP 238 CT+ CP Sbjct: 88 CGACTEVCP 96 >gi|156598257|gb|ABU85392.1| NADH-plastoquinone oxidoreductase subunit I [Ginkgo biloba] Length = 183 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 17/75 (22%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 +C+ C C CP D +++ D +RL+N F Sbjct: 58 HFEFDKCIACEVCVRVCPINLPVVD-----------WKFGED----IGKKRLENYSIDFG 102 Query: 224 LYRCHTIMNCTQSCP 238 + C NC + CP Sbjct: 103 I--CIFCGNCVEYCP 115 >gi|139439415|ref|ZP_01772856.1| Hypothetical protein COLAER_01876 [Collinsella aerofaciens ATCC 25986] gi|133775194|gb|EBA39014.1| Hypothetical protein COLAER_01876 [Collinsella aerofaciens ATCC 25986] Length = 469 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 6/50 (12%) Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMN--CTQSCPKGLNPAKAIAKIKMM 253 D+ E + E RC C + CP +N + I +I+ Sbjct: 33 PVDKGFTEEMALAEAE----RCLNCKKPFCVEGCPVNINIPRFIEQIREK 78 >gi|150398095|ref|YP_001328562.1| formate dehydrogenase subunit alpha [Sinorhizobium medicae WSM419] gi|150029610|gb|ABR61727.1| formate dehydrogenase, alpha subunit [Sinorhizobium medicae WSM419] Length = 959 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 14/94 (14%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLI 204 AK + + + +C++C+ C +C + G L + R Sbjct: 153 NNGEINAKWMPKDESNPYFTYDPAKCIVCSRCVRAC-------EEVQGTFALTISGR-GF 204 Query: 205 DSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 DSR + + F C + C Q+CP Sbjct: 205 DSRVSAG------MNEDFVSSECVSCGACVQACP 232 >gi|308062552|gb|ADO04440.1| NADH dehydrogenase subunit I [Helicobacter pylori Cuz20] Length = 220 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + + Sbjct: 13 AEAHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHNL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|299148592|ref|ZP_07041654.1| glutamate synthase, small subunit [Bacteroides sp. 3_1_23] gi|298513353|gb|EFI37240.1| glutamate synthase, small subunit [Bacteroides sp. 3_1_23] Length = 766 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 62/202 (30%), Gaps = 29/202 (14%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + + G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITVGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + KE+ + + L + + Sbjct: 244 ---GHQVNFDEMLKRMGAFKNIEREEMHKLESECEATKEIDEKSRNATWRQELRKSMK-- 298 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 +R P + + + SR E + L + RC N Sbjct: 299 -----------PKERTAIPRVEMNELDAEYRSHSRKEEVNQGLTAEQAVTEAKRCLDCAN 347 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 C + CP G++ + I I+ Sbjct: 348 PGCMEGCPVGIDIPRFIKNIER 369 >gi|311113698|ref|YP_003984920.1| oxidoreductase [Rothia dentocariosa ATCC 17931] gi|310945192|gb|ADP41486.1| oxidoreductase [Rothia dentocariosa ATCC 17931] Length = 295 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%) Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 +C ++ + Y+ ++ L + F E L + + C C CP Sbjct: 126 ACLNWMLDDRVYVQRLGVVVLMSLL--GTEYFSPEHLRKEYEYNGIETCAVDGMCQTRCP 183 Query: 239 KGLNPAKAIAKIKMM 253 +N I +++ Sbjct: 184 VNINTGDLIRRLRSE 198 >gi|257469750|ref|ZP_05633842.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063982|ref|ZP_07928467.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313689658|gb|EFS26493.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 291 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C CP+ + I + + F R ++ Sbjct: 167 FWSNEFSRCIRCNACRNICPACSCVKCVFDNDDINVLGKANIAPENGFFHLTRAYHVA-- 224 Query: 222 FRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKM 252 C C + CP + K I I Sbjct: 225 ---GNCVDCGECARICPAHIRLDLLNRKIIKDINE 256 >gi|255693385|ref|ZP_05417060.1| glutamate synthase, small subunit [Bacteroides finegoldii DSM 17565] gi|260620862|gb|EEX43733.1| glutamate synthase, small subunit [Bacteroides finegoldii DSM 17565] Length = 766 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 64/202 (31%), Gaps = 29/202 (14%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + + G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITVGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + KE+ ++ + L + + Sbjct: 244 ---GHQVNFDEMLKRMGAFKNIEREEMHKLESECEATKEIDENSRNAAWRQELRKSMK-- 298 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAY--RWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 +R P + + + SR E + L + RC N Sbjct: 299 -----------PKERTAIPRVEMNELDPEYRSHSRKEEVNQGLTAEQAVTEAKRCLDCAN 347 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 CT+ CP G++ + I I+ Sbjct: 348 PGCTEGCPVGIDIPRFIKNIER 369 >gi|148243377|ref|YP_001228534.1| NADH dehydrogenase subunit I [Synechococcus sp. RCC307] gi|147851687|emb|CAK29181.1| NAD(P)H-quinone oxidoreductase subunit I [Synechococcus sp. RCC307] Length = 212 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 24/119 (20%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 ++ + L V H + +++ + + P +E +C+ C C Sbjct: 34 NIARGLSVTFDHLRRRPVTVQYPYEKLIPSERYRGRIHYE-------FDKCIACEVCVRV 86 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP D W+++ + + L N F + C NC + CP Sbjct: 87 CPINLPVVD-------------WVMNK--ATKKKELRNYSIDFGV--CIFCGNCVEYCP 128 >gi|11466187|ref|NP_066510.1| NADH dehydrogenase subunit 8 [Naegleria gruberi] gi|10444222|gb|AAG17788.1|AF288092_13 NADH dehydrogenase subunit 8 [Naegleria gruberi] Length = 159 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L V + + +S+ +I + + H R+ +G C+ C C Sbjct: 12 ELMRGLFVALKNLFSKKVTINYPFEKG--AISPRFRGEHALRRYSNGEERCIACKLCEVV 69 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ D Q R+ ID +C C ++CP Sbjct: 70 CPALAITIDSAQQLNGSRQTTRYDIDMT------------------KCIYCGLCQEACPV 111 Query: 240 G 240 Sbjct: 112 D 112 >gi|30249729|ref|NP_841799.1| NADH dehydrogenase subunit I [Nitrosomonas europaea ATCC 19718] gi|75540328|sp|Q82TV1|NUOI_NITEU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|30180766|emb|CAD85680.1| nuoI; NADH dehydrogenase I (chain I) oxidoreductase protein [Nitrosomonas europaea ATCC 19718] Length = 162 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 33/114 (28%), Gaps = 23/114 (20%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 I + H R+ +G C+ C C CP+ + Sbjct: 31 KITVHYPEEKTPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPAMAITIES-------- 82 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 + RD+ R D + +C C ++CP AI + + Sbjct: 83 -------EQRDDST--RRTTRYDIDMI-KCIFCGFCEEACPV-----DAIVETR 121 >gi|302335791|ref|YP_003800998.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Olsenella uli DSM 7084] gi|301319631|gb|ADK68118.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Olsenella uli DSM 7084] Length = 708 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 21/87 (24%), Gaps = 15/87 (17%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C C +C L R ID + Sbjct: 140 HMFTRCIRCGRCVRACRDLRGVG--VLDYQRTESGIRIGIDGGVSLEEA----------- 186 Query: 225 YRCHTIMNCTQSCPKGLNPAKAIAKIK 251 C C + CP G + A+ K Sbjct: 187 -GCRFCGACVEVCPTG-SIVDALGLAK 211 >gi|302335002|ref|YP_003800209.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] gi|301318842|gb|ADK67329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] Length = 423 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 38/149 (25%) Query: 121 VIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSC 180 + + + S + + + + + + L + E R + C MC C T+C Sbjct: 274 LERTVGGKTSGNRRRILTQKRKMMLTAIQHHPGLSRDLELRVPVCDPTLCTMCGACVTAC 333 Query: 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 P + + D G + AY C C CP+ Sbjct: 334 PPHACDLDER-GHFSVEPAY--------------------------CVNCGACATVCPEH 366 Query: 241 ------LNPAKAI-----AKIKMMLLDRK 258 +P + A+ + +R+ Sbjct: 367 ALAMEPCDPQDLVIRDEEAERRRKAAERQ 395 >gi|291522098|emb|CBK80391.1| electron transport complex, RnfABCDGE type, C subunit [Coprococcus catus GD/7] Length = 442 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 18/92 (19%) Query: 149 KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRD 208 K L E K C+ C C +CP + L A + + Sbjct: 350 KQNNAFLAFDEAEAKSLEPTACISCGRCVNACPMNLMPTK--LEAATIYK---------- 397 Query: 209 EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R+D+L+ + + C C CP Sbjct: 398 -----RVDDLK-KYSVMTCMECGCCAFVCPAN 423 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 9/21 (42%) Query: 226 RCHTIMNCTQSCPKGLNPAKA 246 C + C +CP L P K Sbjct: 370 ACISCGRCVNACPMNLMPTKL 390 >gi|262273090|ref|ZP_06050907.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Grimontia hollisae CIP 101886] gi|262222846|gb|EEY74154.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Grimontia hollisae CIP 101886] Length = 475 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 23/88 (26%), Gaps = 5/88 (5%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP- 221 + C CP Y + Y R E +G R + Sbjct: 213 CTYANAGWMRSIVCIHMCP-YARFQSAMFDKDTFIVGYDA---KRGETRGPRSRKADPKT 268 Query: 222 FRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 L C C Q CP G++ + Sbjct: 269 MGLGDCIDCNLCVQVCPTGIDIRDGLQY 296 >gi|226948842|ref|YP_002803933.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A2 str. Kyoto] gi|226842562|gb|ACO85228.1| oxidoreductase, aldo/keto reductase family [Clostridium botulinum A2 str. Kyoto] Length = 378 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 117 PHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACC 176 P ++V+ + +M H + + + EL+ ++ +C C C Sbjct: 245 PEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTNCRYC 304 Query: 177 STSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 CP + +YL A + + + + + +++L + C C Sbjct: 305 MP-CPFGVNIPKNFKYLNMASIYSDVK-------KQKKKYINHLNKNEKASNCRKCGKCE 356 Query: 235 QSCPKGLNP 243 ++CP+ + Sbjct: 357 EACPQNIKI 365 >gi|190575270|ref|YP_001973115.1| NADH dehydrogenase subunit I [Stenotrophomonas maltophilia K279a] gi|190013192|emb|CAQ46825.1| putative NADH-ubiquinone dehydrogenase I chain I [Stenotrophomonas maltophilia K279a] Length = 163 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 28/103 (27%), Gaps = 18/103 (17%) Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILL 197 + H R+ +G C+ C C CP+ D Sbjct: 32 KYTMMYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTR 91 Query: 198 QAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L++C C +SCP Sbjct: 92 RTTRYDID------------------LFKCIFCGFCEESCPVD 116 >gi|237859138|gb|ACR23742.1| RnfC [Acetobacterium woodii DSM 1030] Length = 443 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 18/91 (19%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 C+ C C CP + + L A Q R+ + +N D C Sbjct: 367 SNCIHCGKCVGVCPIHL----QPLNIAEYSQ--------RNMWDKCESNNAMD------C 408 Query: 228 HTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 +C+ CP +I K ++ ++ Sbjct: 409 IECGSCSYICPAKRTLVSSIRVAKREIIAQR 439 >gi|161525536|ref|YP_001580548.1| formate dehydrogenase subunit alpha [Burkholderia multivorans ATCC 17616] gi|189349736|ref|YP_001945364.1| formate dehydrogenase subunit alpha [Burkholderia multivorans ATCC 17616] gi|160342965|gb|ABX16051.1| formate dehydrogenase, alpha subunit [Burkholderia multivorans ATCC 17616] gi|189333758|dbj|BAG42828.1| formate dehydrogenase alpha subunit [Burkholderia multivorans ATCC 17616] Length = 983 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 14/92 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +C++C C +C + G L A R +S Sbjct: 172 DGANHLHDRKDESNPYFTYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFES 223 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R +PF C + C +CP Sbjct: 224 RVAAGE------SEPFMESECVSCGACVAACP 249 >gi|170728320|ref|YP_001762346.1| cytochrome c oxidase accessory protein CcoG [Shewanella woodyi ATCC 51908] gi|169813667|gb|ACA88251.1| cytochrome c oxidase accessory protein CcoG [Shewanella woodyi ATCC 51908] Length = 496 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + S + + +R E +G R E Sbjct: 236 AICTYLNAGWMREQMCLHCCPYSRFQSVMFDANTKTVTYDA----NRGESRGARKRKQET 291 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 L C C CP G++ Sbjct: 292 E--LGDCVDCHLCVDVCPTGIDI 312 >gi|15645836|ref|NP_208014.1| D-lactate dehydrogenase (dld) [Helicobacter pylori 26695] gi|2314381|gb|AAD08264.1| D-lactate dehydrogenase (dld) [Helicobacter pylori 26695] Length = 948 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 22/135 (16%) Query: 130 SHFYSQHRSIEPWLKTVSPKPAKELLQSHED---------RQKIDGLYECVMCACCSTSC 180 Y H+ I+ ++ + ++ + L C+ C C C Sbjct: 499 EKAYKIHKQIKELFDPNGILNPDVIITNDKEIHTKNLKSIYPIEEHLDMCMECGFCERIC 558 Query: 181 PSYWWNSDRYLGPAILLQAYRWLID-----SRDEFQGERL--DNLEDPFRLYR--CHTIM 231 PS D L P + +R + S + + L + L++ L C Sbjct: 559 PS----KDLSLTPRQRIVIHREVEHLKERVSHGHHEDQVLLDELLKESEYLAHATCAVCH 614 Query: 232 NCTQSCPKGLNPAKA 246 C+ CP ++ K Sbjct: 615 MCSTLCPLEIDTGKI 629 >gi|260892256|ref|YP_003238353.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] gi|260864397|gb|ACX51503.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] Length = 995 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 28/115 (24%), Gaps = 15/115 (13%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 + + E + + EC C C CP D + Sbjct: 70 HRNIEILTGAEVKGLSGEPGNFRVKLELHPRGVKVEECRACGVCFKVCPV--EVPDEFNQ 127 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 +A + + + +D C C +CP KAI Sbjct: 128 GLSSRKAI-YQPYPQAFPRAAVIDW-------GSCTRCGRCRDTCP-----TKAI 169 >gi|238749930|ref|ZP_04611434.1| Hydrogenase-4 component H [Yersinia rohdei ATCC 43380] gi|238711859|gb|EEQ04073.1| Hydrogenase-4 component H [Yersinia rohdei ATCC 43380] Length = 206 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 22/76 (28%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + + A + ++ Sbjct: 33 PQYDAEQCIACGACTMACPANALTMETDI--ANSTRQWQLF------------------- 71 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 72 -LGRCIFCGRCEEVCP 86 >gi|218256876|ref|ZP_03474373.1| hypothetical protein PRABACTJOHN_00025 [Parabacteroides johnsonii DSM 18315] gi|218225908|gb|EEC98558.1| hypothetical protein PRABACTJOHN_00025 [Parabacteroides johnsonii DSM 18315] Length = 488 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 36/133 (27%), Gaps = 11/133 (8%) Query: 126 VVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWW 185 + M H RS P + L D C C C CP Sbjct: 347 MTYMEHLQDNLRSYCPLQPLTEEEN--HFLFDTADLMMQYPTIPCNDCKYCMP-CPYGID 403 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEF-QGERLDNLEDPFR-------LYRCHTIMNCTQSC 237 L + +DE + R L R C + C C Sbjct: 404 IPGILLHYNKCVNEGNVPQSGQDENYREARRAYLIGYDRSVPKLRQADHCTSCNQCNPHC 463 Query: 238 PKGLNPAKAIAKI 250 P+G++ K + +I Sbjct: 464 PQGIDIPKELQRI 476 >gi|225679000|gb|EEH17284.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Paracoccidioides brasiliensis Pb03] Length = 213 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 38/134 (28%), Gaps = 25/134 (18%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ + V + F+ + + H R+ G C+ C C Sbjct: 82 EMLRGMYVVLEQFFRP--PYTIFYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 139 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C +SCP Sbjct: 140 CPAQAITIEAEEREDGSRRTTRYDIDMT------------------KCIYCGFCQESCPV 181 Query: 240 GLNPAKAIAKIKMM 253 AI + K Sbjct: 182 -----DAIVEYKRK 190 >gi|225387468|ref|ZP_03757232.1| hypothetical protein CLOSTASPAR_01221 [Clostridium asparagiforme DSM 15981] gi|225046398|gb|EEG56644.1| hypothetical protein CLOSTASPAR_01221 [Clostridium asparagiforme DSM 15981] Length = 224 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 42/168 (25%) Query: 78 RSCREGICGSCGM--NIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQ 135 CR G CG+C I G N L + V + + V F+ Sbjct: 37 CGCRHGFCGACATIYRIKGKNELKTCLACQT-------------QVQEGMYVASIPFFPT 83 Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAI 195 + + + L +Y C+ C C+ +CP N +Y+ Sbjct: 84 DKRTYNLEEIKPKEQIMMEL--------YPEIYSCIGCNACTKACPQ-KLNVMQYI---- 130 Query: 196 LLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 +R + + + C C+ CP G++ Sbjct: 131 --------------AYAQRGEFEKCAHESFDCVGCGICSTRCPAGISH 164 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 224 LYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDR 257 +Y C CT++CP+ LN + IA + ++ Sbjct: 107 IYSCIGCNACTKACPQKLNVMQYIAYAQRGEFEK 140 >gi|239627165|ref|ZP_04670196.1| ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239517311|gb|EEQ57177.1| ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 696 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 25/95 (26%), Gaps = 19/95 (20%) Query: 165 DGLYECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 CV C C +C Y+ ++A E + L Sbjct: 140 HLFTRCVRCGRCIRACQDLRGVKVLDYIKTDAGVRA------GIPEGKS--LKEA----- 186 Query: 224 LYRCHTIMNCTQSCPKGLNPAKA--IAKIKMMLLD 256 C C + CP G + I K + + Sbjct: 187 --GCRFCGACIEVCPTG-SIMDQVKIMKENRSMAE 218 >gi|224050711|ref|XP_002196899.1| PREDICTED: similar to NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Taeniopygia guttata] Length = 235 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 20/125 (16%) Query: 116 LPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCAC 175 L +++ L + +S+ + + +I + + H R+ G C+ C Sbjct: 84 LLWTELVRGLAMTLSYLFREPATINYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKL 141 Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP+ + + R+ ID +C C + Sbjct: 142 CEAVCPAQAITIEAEPRADGSRRTTRYDIDMT------------------KCIYCGFCQE 183 Query: 236 SCPKG 240 +CP Sbjct: 184 ACPVD 188 >gi|164687680|ref|ZP_02211708.1| hypothetical protein CLOBAR_01322 [Clostridium bartlettii DSM 16795] gi|164603454|gb|EDQ96919.1| hypothetical protein CLOBAR_01322 [Clostridium bartlettii DSM 16795] Length = 308 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 9/104 (8%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 ++E C+ C C CP + + P L ++ ++E + Sbjct: 166 NNYEFEPDKPSEKSCLKCNKCVKYCPGNAILGNFEIDPRKCL---SYITQKKEELSESEI 222 Query: 216 DNLEDPFRLYRCHTIMNCTQSCP--KGLNPAKAIAKIKMMLLDR 257 L++ +++ C C CP K + K I + L+ + Sbjct: 223 QLLKENGKVFGCDI---CQDVCPHNKDIQTTK-ICEFNNELITK 262 >gi|20804166|emb|CAD31369.1| PROBABLE FDXB FERREDOXIN III PROTEIN [Mesorhizobium loti R7A] Length = 105 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 23/85 (27%), Gaps = 3/85 (3%) Query: 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERL 215 C+ C C C S + A + D D+F GE Sbjct: 12 PWTPHYLTAIDGATCIGCGRCFKVC-SREVMHLHGVDDAGEILGICAGED--DDFDGELN 68 Query: 216 DNLEDPFRLYRCHTIMNCTQSCPKG 240 + RC C + CPK Sbjct: 69 RMVMIVDHAGRCIGCGACGRVCPKN 93 >gi|117921666|ref|YP_870858.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117613998|gb|ABK49452.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 477 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 24/83 (28%), Gaps = 6/83 (7%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C CP + + + + +R E +G R Sbjct: 217 AICTYLNAGWMREQMCLHCCPYARFQAVMFDANTKTVTYDA----ARGEARGPRKRK--Q 270 Query: 221 PFRLYRCHTIMNCTQSCPKGLNP 243 P L C C + CP G++ Sbjct: 271 PTELGDCVDCNLCVEVCPTGIDI 293 >gi|325278925|ref|YP_004251467.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Odoribacter splanchnicus DSM 20712] gi|324310734|gb|ADY31287.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Odoribacter splanchnicus DSM 20712] Length = 1178 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 9/82 (10%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 + C+ C C+ CP +L L A ++ E F Sbjct: 687 PEWQVENCIQCNQCAYVCP--HAAIRPFLMSDEELAAAPAGTQAKPAIGKE---LAGYKF 741 Query: 223 RLY----RCHTIMNCTQSCPKG 240 R+ C NC CP Sbjct: 742 RIQVSPLDCTGCGNCADVCPAK 763 >gi|322694431|gb|EFY86261.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Metarhizium acridum CQMa 102] Length = 320 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 20/118 (16%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 + + V M F+ + + H R+ G C+ C C CP+ Sbjct: 176 RGMYVLMEQFFRP--PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPA 233 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + R+ ID +C C +SCP Sbjct: 234 QAITIEAEERADGSRRTTRYDIDMT------------------KCIYCGFCQESCPVD 273 >gi|253584344|ref|ZP_04861542.1| 4Fe-4S ferredoxin [Fusobacterium varium ATCC 27725] gi|251834916|gb|EES63479.1| 4Fe-4S ferredoxin [Fusobacterium varium ATCC 27725] Length = 291 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 9/95 (9%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 + C+ C C CP+ + I + + F R ++ Sbjct: 167 FWSNEFSRCIRCNACRNVCPACSCVKCVFDNDDINVLGKANVAPENGFFHLTRAYHIA-- 224 Query: 222 FRLYRCHTIMNCTQSCPKGLNPA----KAIAKIKM 252 C C + CP + K I I Sbjct: 225 ---GNCVDCGECARICPAHIRLDLLNRKIIKDINE 256 >gi|302879333|ref|YP_003847897.1| NADH-quinone oxidoreductase, chain I [Gallionella capsiferriformans ES-2] gi|302582122|gb|ADL56133.1| NADH-quinone oxidoreductase, chain I [Gallionella capsiferriformans ES-2] Length = 162 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 32/115 (27%), Gaps = 23/115 (20%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 R I + H R+ +G C+ C C CP+ + Sbjct: 30 RKITVQFPDEKTPQSFRFRGLHAQRRYENGEERCIGCKLCEAVCPAM-----------AI 78 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIK 251 A D +D L +C C +SCP AI + + Sbjct: 79 KIAVAEREDGTRRTTQYDID-------LTKCIFCGFCEESCPV-----DAIVETR 121 >gi|254413252|ref|ZP_05027023.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcoleus chthonoplastes PCC 7420] gi|196179872|gb|EDX74865.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcoleus chthonoplastes PCC 7420] Length = 238 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 42/175 (24%), Gaps = 31/175 (17%) Query: 83 GICGSCGMNIDGTNTLACVK------DMKDIKGAIAVYPLPHMSVI---------KDLVV 127 G C C + I+G N L MK + M V + V Sbjct: 45 GACRLCLVEIEGINKLLPACVTEVSEGMKVHTNTETLQEYRRMVVEMLFSEGNHICAVCV 104 Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID-GLYECVMCACCSTSCPSYW-W 185 + Q +IE + + C++C C C Sbjct: 105 VNGNCQLQDAAIEVGMDHTRFPYRFPQRDVDVSHDRFGLDHNRCILCTRCVRVCDEIEGA 164 Query: 186 NSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + G + L E + C + C +CP G Sbjct: 165 HVWDVAGRGPASRIISGLAQPWGE--------------VEACTSCGKCVDACPTG 205 >gi|193069699|ref|ZP_03050651.1| formate hydrogenlyase, subunit F [Escherichia coli E110019] gi|192957062|gb|EDV87513.1| formate hydrogenlyase, subunit F [Escherichia coli E110019] Length = 180 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|326428756|gb|EGD74326.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Salpingoeca sp. ATCC 50818] Length = 209 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 20/121 (16%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 V++ + + +S+++ + +I + + H R+ G C+ C C Sbjct: 62 EVLRGMGMTLSYYFRKPATIYYPFEKG--PLSPRFRGEHALRRYPSGEERCIACKLCEAI 119 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 CP+ + + R+ ID +C C ++CP Sbjct: 120 CPAQAITIETVPREDGSRRTTRYDIDMT------------------KCIFCGFCQEACPV 161 Query: 240 G 240 Sbjct: 162 D 162 >gi|209920159|ref|YP_002294243.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli SE11] gi|209913418|dbj|BAG78492.1| formate hydrogenlyase subunit [Escherichia coli SE11] gi|324017033|gb|EGB86252.1| hydrogenase 4 subunit H [Escherichia coli MS 117-3] Length = 180 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|170290727|ref|YP_001737543.1| membrane associated Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174807|gb|ACB07860.1| Membrane associated Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 431 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 13/89 (14%) Query: 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYR 226 + +C C C+ CP+ ++ R + + + L + Sbjct: 81 IRKCYQCGTCTAICPNSEIQ---------TVRVRRLIKKIQLGAKDGVL----GDPTPWT 127 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 C+ +C +CPK P + + + Sbjct: 128 CYFCGDCNATCPKDATPGYIMDSARKYQI 156 >gi|150388738|ref|YP_001318787.1| aldo/keto reductase [Alkaliphilus metalliredigens QYMF] gi|149948600|gb|ABR47128.1| aldo/keto reductase [Alkaliphilus metalliredigens QYMF] Length = 364 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 20/133 (15%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYE--CVMCACCSTSCPSYWWNSDRY 190 +E +K V + E R KI + C C C+ CP Sbjct: 242 MGTIEEVEENVKIVDHPLTVSKEKVQEIRSKITESMDMLCTACGYCNK-CPQK------- 293 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL-------YRCHTIMNCTQSCPKGLNP 243 + ++AY I D+ RL+ L + ++ C C + C + L Sbjct: 294 INIPTYMEAYNLSILKDDQETKHRLNWLREQEKIKEDDAKTDACVACGICEELCTQKLPI 353 Query: 244 AKAIAKIKMMLLD 256 I ++K M L Sbjct: 354 ---IERLKEMSLK 363 >gi|157157477|ref|YP_001464032.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli E24377A] gi|218696314|ref|YP_002403981.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 55989] gi|256019501|ref|ZP_05433366.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] gi|260856827|ref|YP_003230718.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O26:H11 str. 11368] gi|260869395|ref|YP_003235797.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O111:H- str. 11128] gi|293449036|ref|ZP_06663457.1| hycF [Escherichia coli B088] gi|300820495|ref|ZP_07100646.1| hydrogenase 4 subunit H [Escherichia coli MS 119-7] gi|300906777|ref|ZP_07124459.1| hydrogenase 4 subunit H [Escherichia coli MS 84-1] gi|300919244|ref|ZP_07135767.1| hydrogenase 4 subunit H [Escherichia coli MS 115-1] gi|300922238|ref|ZP_07138364.1| hydrogenase 4 subunit H [Escherichia coli MS 182-1] gi|301305389|ref|ZP_07211483.1| hydrogenase 4 subunit H [Escherichia coli MS 124-1] gi|301326245|ref|ZP_07219628.1| hydrogenase 4 subunit H [Escherichia coli MS 78-1] gi|331669453|ref|ZP_08370299.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA271] gi|331678694|ref|ZP_08379368.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H591] gi|332280623|ref|ZP_08393036.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] gi|157079507|gb|ABV19215.1| formate hydrogenlyase, subunit F [Escherichia coli E24377A] gi|218353046|emb|CAU98871.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli 55989] gi|257755476|dbj|BAI26978.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O26:H11 str. 11368] gi|257765751|dbj|BAI37246.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O111:H- str. 11128] gi|291322126|gb|EFE61555.1| hycF [Escherichia coli B088] gi|300401471|gb|EFJ85009.1| hydrogenase 4 subunit H [Escherichia coli MS 84-1] gi|300413689|gb|EFJ96999.1| hydrogenase 4 subunit H [Escherichia coli MS 115-1] gi|300421368|gb|EFK04679.1| hydrogenase 4 subunit H [Escherichia coli MS 182-1] gi|300526759|gb|EFK47828.1| hydrogenase 4 subunit H [Escherichia coli MS 119-7] gi|300839309|gb|EFK67069.1| hydrogenase 4 subunit H [Escherichia coli MS 124-1] gi|300847090|gb|EFK74850.1| hydrogenase 4 subunit H [Escherichia coli MS 78-1] gi|315254502|gb|EFU34470.1| hydrogenase 4 subunit H [Escherichia coli MS 85-1] gi|320202370|gb|EFW76940.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli EC4100B] gi|323154936|gb|EFZ41128.1| formate hydrogenlyase subunit 6 [Escherichia coli EPECa14] gi|323180141|gb|EFZ65693.1| formate hydrogenlyase subunit 6 [Escherichia coli 1180] gi|323183247|gb|EFZ68644.1| formate hydrogenlyase subunit 6 [Escherichia coli 1357] gi|323946399|gb|EGB42427.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324119970|gb|EGC13848.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|331063121|gb|EGI35034.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA271] gi|331073524|gb|EGI44845.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H591] gi|332102975|gb|EGJ06321.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] Length = 180 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|163847637|ref|YP_001635681.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525495|ref|YP_002569966.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668926|gb|ABY35292.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449374|gb|ACM53640.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Chloroflexus sp. Y-400-fl] Length = 1192 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 28/96 (29%), Gaps = 5/96 (5%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 K ++ + C+ C C CP + Y A+ +L Sbjct: 670 PTGTTKWEKRNIALEIPVWDPNICIQCNKCVFVCPHATIRAKVYPEEALAGAPEGFLSAP 729 Query: 207 RD--EFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 EF G+R P C C ++CP Sbjct: 730 ARFKEFPGQRYTLQVAPE---DCTGCGLCVEACPVK 762 >gi|124266604|ref|YP_001020608.1| NADH dehydrogenase subunit I [Methylibium petroleiphilum PM1] gi|156633524|sp|A2SFN4|NUOI_METPP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|124259379|gb|ABM94373.1| NADH dehydrogenase [Methylibium petroleiphilum PM1] Length = 165 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 18/102 (17%) Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 I + H R+ +G C+ C C CP+ + + + Sbjct: 35 ITVQFPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIESEVRDDGSRR 94 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R+ ID L +C C +SCP Sbjct: 95 TTRYDID------------------LTKCIFCGFCEESCPVD 118 >gi|307318107|ref|ZP_07597543.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Sinorhizobium meliloti AK83] gi|306896148|gb|EFN26898.1| NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding [Sinorhizobium meliloti AK83] Length = 853 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 54/213 (25%), Gaps = 38/213 (17%) Query: 46 DTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTL--ACVKD 103 + V+ G VL + +I +R C C + I+G L AC Sbjct: 9 QSLEVEA---GSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATV 65 Query: 104 MKDIKGAIAVYPLPHMSVIKDL------------VVDMSHFYSQHRSIEPWLKTVSPKPA 151 D PL + L + D + + S Sbjct: 66 AADGMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125 Query: 152 KELLQSHEDRQ----KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR 207 + + +D + I + C+ C C C + A + Sbjct: 126 PKRVFHSKDIRLSPVIIMNVNRCIQCQRCVRMCEEV-----------VGAVALGTVEKGM 174 Query: 208 DEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 D L C NC + CP G Sbjct: 175 DTA------VTGFEGSLASCDQCGNCVEVCPVG 201 >gi|300786460|ref|YP_003766751.1| formate dehydrogenase alpha subunit [Amycolatopsis mediterranei U32] gi|299795974|gb|ADJ46349.1| formate dehydrogenase alpha subunit [Amycolatopsis mediterranei U32] Length = 285 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 56/222 (25%), Gaps = 48/222 (21%) Query: 44 CMDTYYVDLD----NCGPMVLDGLLYIKNKIDPTLTL-RRSCREGICGSCGMNIDGTNTL 98 + + VD + G +LD I PTL C C + ++G+ TL Sbjct: 11 RLVEFTVDGETIRVPEGSTILDACTAAGKDI-PTLCYGDTLEPANACRVCMVEVEGSRTL 69 Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKD--------------------LVVDMSHFYSQHRS 138 K P M V D L + Sbjct: 70 VPSCSRKV---------EPGMVVHTDSERTRTSRKVVLELLASATDLSTTPGVAEWMAET 120 Query: 139 IEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQ 198 + ++ + +C++C C +C W + + A Sbjct: 121 GADPGRFGPDAATVAQPVLVDNELYVRDYGKCILCYKCVDACGE-QWQNSFAITVAGRGF 179 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 R E L D C NC + CP G Sbjct: 180 DARI--------STEFSSPLPDS----ACVYCGNCVEVCPTG 209 >gi|317133642|ref|YP_004092956.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Ethanoligenens harbinense YUAN-3] gi|315471621|gb|ADU28225.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Ethanoligenens harbinense YUAN-3] Length = 1180 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 3/76 (3%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C CS CP ++ A + + + + +P Sbjct: 689 PEWQPENCIQCNFCSYVCP--HAVIRPFVLTADEAEKAPASMKHKPATALAGFEFSINP- 745 Query: 223 RLYRCHTIMNCTQSCP 238 + C +C CP Sbjct: 746 SVLDCTGCGSCANVCP 761 >gi|257081914|ref|ZP_05576275.1| pyruvate flavodoxin/ferredoxin oxidoreductase [Enterococcus faecalis E1Sol] gi|256989944|gb|EEU77246.1| pyruvate flavodoxin/ferredoxin oxidoreductase [Enterococcus faecalis E1Sol] Length = 1177 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 163 KIDGLYECVMCACCSTSCPSYW----WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + +C MC C+ CP + L A A R + + ++ Sbjct: 684 PEWQMDKCTMCNECAFVCPHAAIRPFLADEEELKEAPAGFAMREM-----RGTDGLMYHI 738 Query: 219 EDPFRLYRCHTIMNCTQSCPKG 240 + L C C Q+CP Sbjct: 739 Q--VSLEDCTGCGLCVQACPVK 758 >gi|209761898|gb|ACI79261.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|320645910|gb|EFX14891.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H- str. 493-89] gi|320651210|gb|EFX19645.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H- str. H 2687] Length = 180 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|167044609|gb|ABZ09282.1| putative 4Fe-4S binding domain protein [uncultured marine crenarchaeote HF4000_APKG7F11] Length = 188 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Query: 168 YECVMCACCSTSCPSY---WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 C+ C +CP W+ +D+ + ++ + ERLD + + Sbjct: 70 DSCIADGACIEACPVQIFQWYRTDKDISGIDAVKDKTPWKGLGTTEKEERLDYTDKADAI 129 Query: 225 --YRCHTIMNCTQSCP 238 + C M C CP Sbjct: 130 REHDCIWCMACVSVCP 145 >gi|160887228|ref|ZP_02068231.1| hypothetical protein BACOVA_05245 [Bacteroides ovatus ATCC 8483] gi|156107639|gb|EDO09384.1| hypothetical protein BACOVA_05245 [Bacteroides ovatus ATCC 8483] Length = 337 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 21/109 (19%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRWL-------------IDSRD 208 C+ C C+ CP+ + + W + R Sbjct: 225 WKQQSERCLGCGACAYVCPTCACFDIQEDAKGSSGHRVRCWDSCGFSLFTLHTSGHNPRP 284 Query: 209 EFQGERLDNLEDPFRLY-------RCHTIMNCTQSCPKGLNPAKAIAKI 250 + F C C+++CP +N + + I Sbjct: 285 TQSARWRQRILHKFSYMPERIQETGCTGCGRCSRACPVDMNILEHLISI 333 >gi|83646257|ref|YP_434692.1| polyferredoxin [Hahella chejuensis KCTC 2396] gi|83634300|gb|ABC30267.1| Polyferredoxin [Hahella chejuensis KCTC 2396] Length = 465 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE-DPFRLYRCHTIMNCT 234 C CP Y L L+ Y +R E +G R N L C C Sbjct: 216 CFHMCP-YGRFQSSMLDEDSLVVTYDA---ARGESRGPRKKNANYRAQGLGDCVDCSLCV 271 Query: 235 QSCPKGLNPAK 245 Q CP G++ Sbjct: 272 QVCPTGIDIRD 282 >gi|85712890|ref|ZP_01043931.1| Two domain protein containing GlcD-like FAD/FMN dehydrogenase and GlpC-like Fe-S oxidoreductase [Idiomarina baltica OS145] gi|85693270|gb|EAQ31227.1| Two domain protein containing GlcD-like FAD/FMN dehydrogenase and GlpC-like Fe-S oxidoreductase [Idiomarina baltica OS145] Length = 1011 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 28/120 (23%) Query: 152 KELLQSHEDRQKIDGLYECVMCACCS------TSCPSYWWNSDRYLGPAILL-------- 197 + + R D C C CPSY DR + P Sbjct: 563 FDRQIPIQTRDYYDNAMSCNGNGLCFNYDTKAAMCPSYKVTRDRRMSPKGRASLMREWLR 622 Query: 198 ----QAYRWLIDSRDE--------FQGERLDNLEDPFRL--YRCHTIMNCTQSCPKGLNP 243 Q YR DE + + D+ ++ +C CT CP ++ Sbjct: 623 LTAEQNYRAEKQPDDEVSWFEKWRNRNDSKDDYSHEVKVSMDKCLACKACTNQCPVSVDV 682 >gi|290958203|ref|YP_003489385.1| NADH dehydrogenase subunit NuoI2 [Streptomyces scabiei 87.22] gi|260647729|emb|CBG70834.1| NADH dehydrogenase subunit NuoI2 [Streptomyces scabiei 87.22] Length = 192 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 27/131 (20%) Query: 114 YPLPHMSVIKDLVVDMSHFYSQHRSIEPWL-KTVSPKPAKELLQSHEDRQKIDGLYECVM 172 PLP + K L V + + + + + P + ++ E+ C + Sbjct: 2 APLPGSGLAKGLAVTLRTMTRKTVTAQYPDVQPELPPRTRGVIGLFEE--------NCTV 53 Query: 173 CACCSTSCPSYWWNSD---RYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY--RC 227 C C+ CP + D + P+ ER N+ D F + C Sbjct: 54 CMLCARECPDWCIYIDSHKETVPPSAP-------------GGRERSRNVLDRFAIDFSLC 100 Query: 228 HTIMNCTQSCP 238 C + CP Sbjct: 101 MYCGICIEVCP 111 >gi|260171116|ref|ZP_05757528.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] gi|315919436|ref|ZP_07915676.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] gi|313693311|gb|EFS30146.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] Length = 588 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 51/208 (24%), Gaps = 35/208 (16%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCRE-----GICGSCGMNIDGTNTLACVKDMK--- 105 G +L+ + I I + C C + + G LA + Sbjct: 18 PEGSTILEAAIKIGINIPTLCHIDLKGTCIKNNPASCRICVVEVMGRRNLAPACATRCTE 77 Query: 106 -DIKGAIAVYPLPHMSVIKDLVVDMSHFY------------SQHRSIEPWLKTVSPKPAK 152 + + + V+ +L++ + Sbjct: 78 GMVVKTSTLRVMNARKVVAELILSDHPNDCLTCPKCGNCELQTLALRFNIREMPFNGGEL 137 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + + +C+ C C + C L A R ++ Sbjct: 138 SPRKREITASIVRNMDKCIFCRRCESVCNDVQTVG--------ALGAIRRGFNTTIAPAF 189 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +R+ + + C C CP G Sbjct: 190 DRM--MTESE----CTYCGQCVAVCPVG 211 >gi|254563536|ref|YP_003070631.1| D-lactate dehydrogenase [Methylobacterium extorquens DM4] gi|254270814|emb|CAX26819.1| putative D-lactate dehydrogenase (cytochrome) [Methylobacterium extorquens DM4] Length = 990 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 32/115 (27%), Gaps = 10/115 (8%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRY 190 R + + K A + + C C CPSY D Sbjct: 546 MRFGPDYAVSEPQKTALDWSDWG---GFGPAVEMCNNNGTCRKLAGGAMCPSYRATRDEQ 602 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + R I + ++ L C + C + CP G++ AK Sbjct: 603 HLTRGRANSLRLAISGQLGPDAFLSPEMKRTMDL--CVSCKACRRECPTGVDMAK 655 >gi|237721365|ref|ZP_04551846.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp. 2_2_4] gi|293369931|ref|ZP_06616502.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD CMC 3f] gi|229449161|gb|EEO54952.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp. 2_2_4] gi|292634977|gb|EFF53498.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD CMC 3f] Length = 766 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 62/202 (30%), Gaps = 29/202 (14%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + + G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITVGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + KE+ + + L + + Sbjct: 244 ---GHQVNFDEMLKRMGAFKNIEREEMHKLESECEATKEIDEKSRNAAWRQELRKSMK-- 298 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 +R P + + + SR E + L + RC N Sbjct: 299 -----------PKERTAIPRVEMNELDAEYRSHSRKEEVNQGLTAEQAVTEAKRCLDCAN 347 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 C + CP G++ + I I+ Sbjct: 348 PGCMEGCPVGIDIPRFIKNIER 369 >gi|170741649|ref|YP_001770304.1| FAD linked oxidase domain-containing protein [Methylobacterium sp. 4-46] gi|168195923|gb|ACA17870.1| FAD linked oxidase domain protein [Methylobacterium sp. 4-46] Length = 983 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 11/93 (11%) Query: 168 YECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C + CPSY R + + + L E Sbjct: 558 EMCNNNGTCRSLAGGVMCPSYRATRSEEHLTRGRANTLRLALSGQ--LGPDALTAPETKR 615 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLL 255 L C + C + CP G++ +A++K+ +L Sbjct: 616 ALDLCVSCKGCRRECPTGVD----MARMKIEVL 644 >gi|163853601|ref|YP_001641644.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium extorquens PA1] gi|163665206|gb|ABY32573.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium extorquens PA1] Length = 990 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 32/115 (27%), Gaps = 10/115 (8%) Query: 136 HRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCS-----TSCPSYWWNSDRY 190 R + + K A + + C C CPSY D Sbjct: 546 MRFGPDYAVSEPQKTALDWSDWG---GFGPAVEMCNNNGTCRKLAGGAMCPSYRATRDEQ 602 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAK 245 + R I + ++ L C + C + CP G++ AK Sbjct: 603 HLTRGRANSLRLAISGQLGPDAFLSPEMKRTMDL--CVSCKACRRECPTGVDMAK 655 >gi|77919331|ref|YP_357146.1| aldo/keto reductase family oxidoreductase [Pelobacter carbinolicus DSM 2380] gi|77545414|gb|ABA88976.1| predicted oxidoreductases of the aldo/keto reductase family [Pelobacter carbinolicus DSM 2380] Length = 382 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 10/88 (11%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN--LEDPFRLYR 226 C C C CPS + L R++ D R+ + Sbjct: 297 PCTACGYCMP-CPSGVNIPRIF-----NLYNDRFIY--GDSGFPHRMYTITMNAAELASN 348 Query: 227 CHTIMNCTQSCPKGLNPAKAIAKIKMML 254 C C + CP+ + + + L Sbjct: 349 CTRCGLCEKHCPQHIRIMDMLEECHRTL 376 >gi|315925133|ref|ZP_07921350.1| ferredoxin hydrogenase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622032|gb|EFV01996.1| ferredoxin hydrogenase [Pseudoramibacter alactolyticus ATCC 23263] Length = 580 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 26/98 (26%), Gaps = 16/98 (16%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS-DRYLGPAILLQAYRW 202 + V + E + D I +C+ C C C + G Sbjct: 119 QDVPFESCIERRPWNRDFPLIRDAAKCIKCMRCIQVCDKMQSLGVWDFEGTG-------- 170 Query: 203 LIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 SR N+ED C C CP G Sbjct: 171 ---SRSTVNVSHARNIEDA----GCSLCGQCVTHCPVG 201 >gi|307726470|ref|YP_003909683.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1003] gi|307586995|gb|ADN60392.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1003] Length = 993 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 158 HEDRQKIDGLYECVMCACCST-----SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 E + C+ C + CPS+ + + ++ E Sbjct: 569 PEGDGMQRAVERCIGMGKCRSLEGGTMCPSFRATREEKFSTRGRAHLFWEMLQG--EVVK 626 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + +++E L C C CP Sbjct: 627 DGWNSVEVKEALDTCLACKGCKSDCPTH 654 >gi|261868404|ref|YP_003256326.1| hydrogenase-4 subunit H [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413736|gb|ACX83107.1| hydrogenase-4 component H [Aggregatibacter actinomycetemcomitans D11S-1] Length = 215 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 28/117 (23%) Query: 132 FYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKID-GLYECVMCACCSTSCPSYWWNSDRY 190 + +++ + P K + R K + +C++CA C+ +CP+ Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRT- 59 Query: 191 LGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAI 247 D G+R +L L RC C + CP KAI Sbjct: 60 -----------------DPVTGDRTWSLF----LGRCIFCGRCEEVCP-----TKAI 90 >gi|218244988|ref|YP_002370359.1| bidirectional hydrogenase complex protein HoxU [Cyanothece sp. PCC 8801] gi|218165466|gb|ACK64203.1| 4Fe-4S ferredoxin, iron-sulphur binding, conserved site [Cyanothece sp. PCC 8801] Length = 238 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 37/164 (22%), Gaps = 17/164 (10%) Query: 80 CREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPL--PHMSVIKDLVVDMSHFYSQHR 137 + +C I + + +A+ L V VV+ + Sbjct: 56 GSSKLQPACVTQIQEEMVVHTNTEKLQEYRRMAIELLFAEGNHVCAVCVVNGNCELQSMA 115 Query: 138 SIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW-WNSDRYLGPAIL 196 + P + Q C++C C C + Sbjct: 116 VKLGMDHSRFPYQFPDRKIDVSHPQFGIDHNRCILCTRCVRVCDEIEGAHVWDVANRGGN 175 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + + + C + C ++CP G Sbjct: 176 SFIVSGINQPWGD--------------VDACTSCGKCVEACPTG 205 >gi|158634510|gb|ABW76107.1| Fe-hydrogenase [Retortamonas sp. Vale] Length = 602 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 19/108 (17%) Query: 166 GLYECVMCACCSTSC---PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C C + + ++G + Y D + +L +++ Sbjct: 22 DYALCIGCNACVRQCANXHVFXFKPSEFVGYPPFINYY---ADPASSREDIKLKHVDSKD 78 Query: 223 RLYR--------CHTIMNCTQSCPKG-LNPAKAIAKIKM--MLLDRKI 259 R C C CP L P A ++ ++RK+ Sbjct: 79 APKRSVKLESSFCVNCGQCASVCPTNALQPNHA--DVERVLRAIERKV 124 >gi|134094848|ref|YP_001099923.1| putative ferredoxin transmembrane protein [Herminiimonas arsenicoxydans] Length = 466 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 3/74 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + ++++ + + R E +L C C Q Sbjct: 212 CKYMCPYARFQSSMFDKDSLIITYDQKRGEPRGMPGK---SASETDKKLGDCIDCTMCVQ 268 Query: 236 SCPKGLNPAKAIAK 249 CP G++ + Sbjct: 269 VCPVGIDIRDGLQY 282 >gi|224026048|ref|ZP_03644414.1| hypothetical protein BACCOPRO_02801 [Bacteroides coprophilus DSM 18228] gi|224019284|gb|EEF77282.1| hypothetical protein BACCOPRO_02801 [Bacteroides coprophilus DSM 18228] Length = 155 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 15/117 (12%) Query: 125 LVVDMSHFYS-QHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSY 183 + M F+ + P + + + + + CV C C +CP+ Sbjct: 22 MRTSMKVFWQPKVTEQYPENRHTTLHIPERHRAMLVMPHDSENHHHCVACGLCQMACPN- 80 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G + R DE ++ ++ + L C C +CP G Sbjct: 81 --------GTIKVTSETR-----EDEDGKKKKFLVKYEYNLGSCMFCQLCVNACPHG 124 >gi|220903579|ref|YP_002478891.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867878|gb|ACL48213.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1178 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 + C+ C CS CP L L+ ++D E L L+ Sbjct: 678 AIPEWQVENCIQCCQCSFVCP--HAAIRPVLATEEELEGAPAAFATKDAMGKE-LKGLKF 734 Query: 221 PFRLY--RCHTIMNCTQSCPKG 240 ++Y C +C CP Sbjct: 735 RIQVYPEDCLGCGSCADVCPAK 756 >gi|220927475|ref|YP_002504384.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium cellulolyticum H10] gi|219997803|gb|ACL74404.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Clostridium cellulolyticum H10] Length = 1183 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 22/81 (27%), Gaps = 8/81 (9%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAY---RWLIDSRDEFQGERLDNLE 219 C+ C C+ C ++ ++A L D+R + + Sbjct: 690 PEWDASLCLQCNSCAFVCS--HATIRPFMLSEDEIKAAPSNIKLADTRPKASEYKFTMSV 747 Query: 220 DPFRLYRCHTIMNCTQSCPKG 240 P C C CP Sbjct: 748 SPL---DCMGCGECITVCPVK 765 >gi|117618882|ref|YP_856035.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560289|gb|ABK37237.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1191 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 5/77 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLG--PAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C CP + Y A +A + + + F R P Sbjct: 689 WHSDICIQCGNCVFVCPHAALRAKFYHQDWLATAPEAAQSVPVTAKGFPDSRYTLQLYPE 748 Query: 223 RLYRCHTIMNCTQSCPK 239 C C ++CP Sbjct: 749 ---DCTGCGQCVKACPV 762 >gi|222053578|ref|YP_002535940.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. FRC-32] gi|221562867|gb|ACM18839.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. FRC-32] Length = 132 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 21/122 (17%) Query: 119 MSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST 178 M ++K L + +SH + + +++ + +CV C C T Sbjct: 3 MPLLKGLGITLSHLFKKPVTLQY---PDERPEVAPTFRGLHALNISHDKAKCVACYLCPT 59 Query: 179 SCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 CP+ + A + ID RC C ++CP Sbjct: 60 VCPAKCIKVEAGEDENHNKYAAEYEIDML------------------RCIFCGFCVEACP 101 Query: 239 KG 240 Sbjct: 102 VD 103 >gi|94271444|ref|ZP_01291957.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93450441|gb|EAT01627.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 295 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 23/67 (34%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C T+CP + ++ R +D + RC C Sbjct: 205 FCRTTCPL-----GAFYALFAKVRLVRLRLD------------------VNRCTNCKACH 241 Query: 235 QSCPKGL 241 Q CP G+ Sbjct: 242 QVCPMGV 248 >gi|313202859|ref|YP_004041516.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Paludibacter propionicigenes WB4] gi|312442175|gb|ADQ78531.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Paludibacter propionicigenes WB4] Length = 1177 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 26/104 (25%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 +K + + C+ C C+ CP +++D Sbjct: 668 DQGTSKYEKRGVASHVPVWNSSNCIQCNQCAYVCP--------------HAAIRPFILDL 713 Query: 207 RDEFQGERLDNLEDPFR------------LYRCHTIMNCTQSCP 238 +++ + + L+ + + C NC + CP Sbjct: 714 KEQENAPQFEMLKTNGKQFADMTFRIQVDVLDCMGCNNCAEVCP 757 >gi|288559598|ref|YP_003423084.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] gi|288542308|gb|ADC46192.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] Length = 367 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 33/109 (30%), Gaps = 19/109 (17%) Query: 144 KTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDR------------YL 191 K K E+R + CV C C +CP + D + Sbjct: 6 KETEGKNFCIKRSLGEERVLSFKDHVCVGCGLCEATCPVEAISLDEVAPIERKYVDTYFS 65 Query: 192 GPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 G + Q Y + D +LD ED C C+ CP G Sbjct: 66 GHEKIAQNYALFTN--DNEIKAKLDICEDK-----CVLCGLCSGVCPAG 107 Score = 35.9 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 20/71 (28%), Gaps = 20/71 (28%) Query: 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRC 227 +C C C CP + + GP G+R +L C Sbjct: 287 EKCGTCGACIDVCPCNVLSFPKSTGP------------------GDRGTHLVKEE--DYC 326 Query: 228 HTIMNCTQSCP 238 C + CP Sbjct: 327 IHCGACAKVCP 337 >gi|257469693|ref|ZP_05633785.1| putative oxidoreductase [Fusobacterium ulcerans ATCC 49185] gi|317063925|ref|ZP_07928410.1| oxidoreductase [Fusobacterium ulcerans ATCC 49185] gi|313689601|gb|EFS26436.1| oxidoreductase [Fusobacterium ulcerans ATCC 49185] Length = 373 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 8/140 (5%) Query: 116 LPHMSVIKDLVVDMSHF--YSQHRSIEPWLKTVSPKPAKEL--LQSHEDRQKIDGLYECV 171 + + KD+++ +S SQ + ++ P +E + + C Sbjct: 232 IRFAASQKDVMMVLSGMSEMSQLENNTDYMADFKPFTQEEYELIDNVVKIISESIAIPCT 291 Query: 172 MCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR-LYRCHTI 230 C C CP + ++ + ++ Q NL C Sbjct: 292 ACQYCVEGCPKNIAIPSYF---SLYNNEKQSIVTGTFSLQKLYYTNLSQNHGKASDCIEC 348 Query: 231 MNCTQSCPKGLNPAKAIAKI 250 C ++CP+ + KA+ + Sbjct: 349 KKCEKACPQHIEIVKALKDV 368 >gi|255536839|ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] gi|223549385|gb|EEF50873.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] Length = 222 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 24/123 (19%) Query: 120 SVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTS 179 +++ L + + +F+ + +I + + H R+ G C+ C C Sbjct: 75 EMVRGLSLTLKYFFEKKVTINYPFEKG--PLSPRFRGEHALRRYPTGEERCIACKLCEAI 132 Query: 180 CPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSC 237 CP+ QA + R++ R D C C ++C Sbjct: 133 CPA---------------QAITIEAEEREDGSRRTTRYDIDMTK-----CIYCGFCQEAC 172 Query: 238 PKG 240 P Sbjct: 173 PVD 175 >gi|160887094|ref|ZP_02068097.1| hypothetical protein BACOVA_05110 [Bacteroides ovatus ATCC 8483] gi|156107505|gb|EDO09250.1| hypothetical protein BACOVA_05110 [Bacteroides ovatus ATCC 8483] Length = 766 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 62/202 (30%), Gaps = 29/202 (14%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + + G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITVGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + KE+ + + L + + Sbjct: 244 ---GHQVNFDEMLKRMGAFKNIEREEMHKLESECEATKEIDEKSRNAAWRQELRKSMK-- 298 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 +R P + + + SR E + L + RC N Sbjct: 299 -----------PKERTAIPRVEMNELDAEYRSHSRKEEVNQGLTAEQAVTEAKRCLDCAN 347 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 C + CP G++ + I I+ Sbjct: 348 PGCMEGCPVGIDIPRFIKNIER 369 >gi|217032331|ref|ZP_03437827.1| hypothetical protein HPB128_132g29 [Helicobacter pylori B128] gi|298735708|ref|YP_003728233.1| NADH dehydrogenase I subunit I [Helicobacter pylori B8] gi|216945997|gb|EEC24611.1| hypothetical protein HPB128_132g29 [Helicobacter pylori B128] gi|298354897|emb|CBI65769.1| NADH dehydrogenase I chain I [Helicobacter pylori B8] Length = 220 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + + Sbjct: 13 AEAHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHNL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|188528057|ref|YP_001910744.1| NADH dehydrogenase subunit I [Helicobacter pylori Shi470] gi|226737396|sp|B2UV32|NUOI_HELPS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|188144297|gb|ACD48714.1| NADH dehydrogenase subunit I [Helicobacter pylori Shi470] Length = 220 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 100 CVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE 159 + + + + K L + + F+S +I + P + + Sbjct: 13 AEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHNL 71 Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLE 219 R G C+ C C C S R + + + R Sbjct: 72 QRLLDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDS 113 Query: 220 DPFRLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 114 YTINLGRCIYCGLCAEVCP 132 >gi|148555900|ref|YP_001263482.1| NADH dehydrogenase subunit I [Sphingomonas wittichii RW1] gi|148501090|gb|ABQ69344.1| NADH-quinone oxidoreductase, chain I [Sphingomonas wittichii RW1] Length = 161 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 33/115 (28%), Gaps = 24/115 (20%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + +F+ +I + H R+ +G C+ C C CP+ Sbjct: 22 TLKYFFRAKATINY--PFEKNPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPA----- 74 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 QA + RD+ R D C C ++CP Sbjct: 75 ----------QAITIEAEPRDDGSRRTTRYDIDMTK-----CIFCGFCQEACPVD 114 >gi|148546847|ref|YP_001266949.1| cytochrome c oxidase cbb3 type, accessory protein FixG [Pseudomonas putida F1] gi|148510905|gb|ABQ77765.1| Cytochrome c oxidase cbb3 type, accessory protein FixG [Pseudomonas putida F1] Length = 472 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R + + L C C Sbjct: 223 CVYMCPYARFQSVMFDKDTLIVSY-----DPRRGETRGPRKKDTDYKAQGLGDCIDCTMC 277 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 278 VQVCPTGIDIRD 289 >gi|294783062|ref|ZP_06748386.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Fusobacterium sp. 1_1_41FAA] gi|294479940|gb|EFG27717.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Fusobacterium sp. 1_1_41FAA] Length = 1188 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 5/78 (6%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L +C+ C CS CP +L + + S + G+ L+NL ++ Sbjct: 696 WNLDKCIQCNQCSYVCP--HAAIRAFLIT-DEEKVASPIEFSTLKANGKGLENLSYRIQV 752 Query: 225 Y--RCHTIMNCTQSCPKG 240 C +C CP Sbjct: 753 TPLDCTGCGSCANVCPAK 770 >gi|260171594|ref|ZP_05758006.1| putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta [Bacteroides sp. D2] gi|315919908|ref|ZP_07916148.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp. D2] gi|313693783|gb|EFS30618.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp. D2] Length = 766 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 62/202 (30%), Gaps = 29/202 (14%) Query: 57 PMVLDGLLYIKNKI--DPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVY 114 M LL K +I D +L G+CG+C + + G CV + Sbjct: 191 MMKFVCLLTKKYEIPTDVSLNTIMVDGTGMCGACRITVGGKTKFVCVDGPEFD------- 243 Query: 115 PLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCA 174 V D ++ + E + KE+ + + L + + Sbjct: 244 ---GHQVNFDEMLKRMGAFKNIEREEMHKLESECEATKEIDEKSRNAAWRQELRKSMK-- 298 Query: 175 CCSTSCPSYWWNSDRYLGPAILLQ--AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMN 232 +R P + + + SR E + L + RC N Sbjct: 299 -----------PKERTAIPRVEMNELDAEYRSHSRKEEVNQGLTAEQAVTEAKRCLDCAN 347 Query: 233 --CTQSCPKGLNPAKAIAKIKM 252 C + CP G++ + I I+ Sbjct: 348 PGCMEGCPVGIDIPRFIKNIER 369 >gi|240141022|ref|YP_002965502.1| putative D-lactate dehydrogenase (cytochrome) [Methylobacterium extorquens AM1] gi|240010999|gb|ACS42225.1| putative D-lactate dehydrogenase (cytochrome) [Methylobacterium extorquens AM1] Length = 990 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D + R I + ++ Sbjct: 575 EMCNNNGTCRKLAGGAMCPSYRATRDEQHLTRGRANSLRLAISGQLGPDAFLSPEMKRTM 634 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 L C + C + CP G++ AK Sbjct: 635 DL--CVSCKACRRECPTGVDMAK 655 >gi|218780439|ref|YP_002431757.1| electron transport complex, RnfABCDGE type, B subunit [Desulfatibacillum alkenivorans AK-01] gi|218761823|gb|ACL04289.1| Putative electron transport complex, RnfB protein [Desulfatibacillum alkenivorans AK-01] Length = 672 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 18/72 (25%), Gaps = 27/72 (37%) Query: 170 CVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHT 229 C+ C +CP A D E +C Sbjct: 138 CLGLGSCVKACP---------------FGALEMGEDGLPRVIAE------------KCTG 170 Query: 230 IMNCTQSCPKGL 241 C + CPKG+ Sbjct: 171 CGTCERVCPKGI 182 >gi|167585980|ref|ZP_02378368.1| NADH dehydrogenase subunit I [Burkholderia ubonensis Bu] Length = 162 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 30/108 (27%), Gaps = 18/108 (16%) Query: 133 YSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLG 192 Y+ R + H R+ +G C+ C C CP+ + Sbjct: 26 YAFRRKFTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPAMAITIESETR 85 Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID L +C C +SCP Sbjct: 86 ADNTRRTTRYDID------------------LTKCIFCGFCEESCPVD 115 >gi|160933984|ref|ZP_02081371.1| hypothetical protein CLOLEP_02846 [Clostridium leptum DSM 753] gi|156866657|gb|EDO60029.1| hypothetical protein CLOLEP_02846 [Clostridium leptum DSM 753] Length = 379 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 13/126 (10%) Query: 128 DMSHFYSQHRSIEPWLKTVS-PKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWN 186 MS+ +I+ + + E L + C C C + CP Sbjct: 257 GMSNSEQLRENIQTFEEEKPLNSKEMEKLLKIANNMVEKIALPCTACRYCVSHCPQ---- 312 Query: 187 SDRYLGPAILLQAYRWLIDSRDEF---QGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 G I + + L +++ R C +C CP+ + Sbjct: 313 -----GLDIPALLALYNEHCVTDGGFIAPMALSAIQEEKRPGACIGCRSCEAVCPQQIKV 367 Query: 244 AKAIAK 249 ++A+A Sbjct: 368 SEAMAD 373 >gi|218532462|ref|YP_002423278.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium chloromethanicum CM4] gi|218524765|gb|ACK85350.1| D-lactate dehydrogenase (cytochrome) [Methylobacterium chloromethanicum CM4] Length = 990 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 168 YECVMCACCS-----TSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C C CPSY D + R I + ++ Sbjct: 575 EMCNNNGTCRKLAGGAMCPSYRATRDEQHLTRGRANSLRLAISGQLGPDAFLSPEMKRTM 634 Query: 223 RLYRCHTIMNCTQSCPKGLNPAK 245 L C + C + CP G++ AK Sbjct: 635 DL--CVSCKACRRECPTGVDMAK 655 >gi|126736053|ref|ZP_01751797.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] gi|126714610|gb|EBA11477.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] Length = 167 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 24/120 (20%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 K + M +F+S ++ + H R+ +G C+ C C CP+ Sbjct: 23 KGFSLGMKYFFSPKATLNY--PHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPA 80 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 QA + RD+ R D C C ++CP Sbjct: 81 ---------------QAITIDAEPRDDGSRRTTRYDIDMTK-----CIYCGFCQEACPVD 120 >gi|94496472|ref|ZP_01303049.1| NADH-quinone oxidoreductase, chain I [Sphingomonas sp. SKA58] gi|94424218|gb|EAT09242.1| NADH-quinone oxidoreductase, chain I [Sphingomonas sp. SKA58] Length = 161 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 32/115 (27%), Gaps = 24/115 (20%) Query: 128 DMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNS 187 + +F+ +I + H R+ +G C+ C C CP+ Sbjct: 22 TLKYFFKPKATINY--PYEKNPISPRFRGEHALRRYPNGEERCIACKLCEAVCPA----- 74 Query: 188 DRYLGPAILLQAYRWLIDSRDEFQGE--RLDNLEDPFRLYRCHTIMNCTQSCPKG 240 QA RD+ R D C C ++CP Sbjct: 75 ----------QAITIEAQPRDDGSRRTTRYDIDMTK-----CIYCGFCQEACPVD 114 >gi|94263263|ref|ZP_01287079.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93456346|gb|EAT06470.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 295 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 23/67 (34%) Query: 175 CCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCT 234 C T+CP + ++ R +D + RC C Sbjct: 205 FCRTTCPL-----GAFYALFAKVRLVRLRLD------------------VNRCTNCKACH 241 Query: 235 QSCPKGL 241 Q CP G+ Sbjct: 242 QVCPMGV 248 >gi|90421539|ref|YP_529909.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopseudomonas palustris BisB18] gi|90103553|gb|ABD85590.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Rhodopseudomonas palustris BisB18] Length = 485 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 1/79 (1%) Query: 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRL 224 L + C CP + A+ + Y++ + + ++ Sbjct: 211 YLLAGFMREQVCVYMCPWPRIQAALTDEWALNVT-YKYDRGEQRTSLKKAEQARAQGEKV 269 Query: 225 YRCHTIMNCTQSCPKGLNP 243 C C CP G++ Sbjct: 270 GDCVDCNQCVAVCPTGIDI 288 >gi|312144646|ref|YP_003996092.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Halanaerobium sp. 'sapolanicus'] gi|311905297|gb|ADQ15738.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Halanaerobium sp. 'sapolanicus'] Length = 1178 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 5/80 (6%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 C+ C C+ +CP +L + + E +G++L+ LE Sbjct: 683 PDWKDDICIQCNQCALACP--HAVIRPFLLDEEEVANAPEGFKT-IEAKGKQLEGLEYKI 739 Query: 223 RL--YRCHTIMNCTQSCPKG 240 ++ Y C C CP Sbjct: 740 QVSPYDCTGCGVCVDVCPVN 759 >gi|297380448|gb|ADI35335.1| NADH-quinone oxidoreductase, chain I [Helicobacter pylori v225d] Length = 220 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 19/136 (13%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQ 162 + + + + K L + + F+S +I + P + + R Sbjct: 16 HSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIH-YPMEQLPLSPRYRAVHNLQRL 74 Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 G C+ C C C S R + + + R Sbjct: 75 LDSGSERCIGCGLCEKICTSNCI---------------RIITH---KGEDNRKKIDSYTI 116 Query: 223 RLYRCHTIMNCTQSCP 238 L RC C + CP Sbjct: 117 NLGRCIYCGLCAEVCP 132 >gi|288917191|ref|ZP_06411560.1| NADH-quinone oxidoreductase, chain I [Frankia sp. EUN1f] gi|288351382|gb|EFC85590.1| NADH-quinone oxidoreductase, chain I [Frankia sp. EUN1f] Length = 223 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 20/119 (16%) Query: 123 KDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 K V S + + + + P + DGL +CV C C+ +CP+ Sbjct: 8 KGFGVTFSTMFKKPTTEQYPEYKKETAPRFHGRHQL--NRHPDGLEKCVGCELCAWACPA 65 Query: 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQ---GERLDNLEDPFRLYRCHTIMNCTQSCP 238 + D+ DE + GER + L RC C ++CP Sbjct: 66 DAIYVEG--------------ADNTDEERYSPGERYGRVYQINYL-RCILCGLCIEACP 109 >gi|288940021|ref|YP_003442261.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Allochromatium vinosum DSM 180] gi|288895393|gb|ADC61229.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Allochromatium vinosum DSM 180] Length = 1193 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 23/82 (28%), Gaps = 12/82 (14%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLG------PAILLQAYRWLIDSRDEFQGERLD 216 C C C CP + Y PA A I +D +G R+ Sbjct: 691 PKWDENLCTQCGKCPLVCPHAAIRAKVYPAALTNGAPASFKHAA---IKGKDFPEGYRVS 747 Query: 217 NLEDPFRLYRCHTIMNCTQSCP 238 P C C + CP Sbjct: 748 YQIAPD---DCTGCGLCAEVCP 766 >gi|257053167|ref|YP_003131000.1| ferredoxin [Halorhabdus utahensis DSM 12940] gi|256691930|gb|ACV12267.1| ferredoxin [Halorhabdus utahensis DSM 12940] Length = 609 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 14/79 (17%) Query: 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDP 221 L C+ C C +C + L + + DS P Sbjct: 147 YITMDLDRCISCGRCVRTCE--EVVGNDTLNFGNRGKDTTIIADS------------GVP 192 Query: 222 FRLYRCHTIMNCTQSCPKG 240 C + C Q+CP G Sbjct: 193 LGESSCTSCGGCVQACPTG 211 >gi|220935360|ref|YP_002514259.1| reductase, iron-sulfur binding subunit, putative [Thioalkalivibrio sp. HL-EbGR7] gi|219996670|gb|ACL73272.1| reductase, iron-sulfur binding subunit, putative [Thioalkalivibrio sp. HL-EbGR7] Length = 496 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 16/109 (14%) Query: 160 DRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL--------------ID 205 +R + CV C C+ C + SD P R + + Sbjct: 64 NRGLQVFMDSCVKCGACTDKCHYFLGTSDPRNMPVARQDLLRGVYRRYYTLPGKLFPKLV 123 Query: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254 + E LD ++C C+ CP G++ A+ + ++ Sbjct: 124 GAMDLTEEVLDQWYSY--FHQCSECRRCSVFCPYGIDTAEITMATREIM 170 >gi|147918931|ref|YP_687343.1| NADPH-dependent glutamate synthase, small subunit [uncultured methanogenic archaeon RC-I] gi|110622739|emb|CAJ38017.1| NADPH-dependent glutamate synthase, small subunit [uncultured methanogenic archaeon RC-I] Length = 466 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Query: 193 PAILLQAYRWLIDSRDEFQGERLDNLEDPFRLY----------RCHTIM--NCTQSCPKG 240 P + R ID +++ ER+ N ++ Y RC C + CP G Sbjct: 2 PDKEIIDRRHRIDPKEQEPAERIKNFDEVASTYTEEEALAEAKRCLKCKTPMCIEGCPVG 61 Query: 241 LNPAKAIAKIKM 252 ++ + I +IK Sbjct: 62 IDIRQFIDEIKQ 73 >gi|121998536|ref|YP_001003323.1| NADH dehydrogenase subunit I [Halorhodospira halophila SL1] gi|156633521|sp|A1WXV9|NUOI_HALHL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|121589941|gb|ABM62521.1| NADH dehydrogenase subunit I [Halorhodospira halophila SL1] Length = 163 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 RSI + R+ +G C+ C C CP+ D + Sbjct: 31 RSITLEFPEERAPKSPRFRGHLALRRYPNGEERCIACKLCEAVCPALAITIDSHQRADGT 90 Query: 197 LQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 + R+ ID ++C C +SCP Sbjct: 91 RRTTRYDIDM------------------FKCIYCGFCEESCPVD 116 >gi|323706270|ref|ZP_08117837.1| aldo/keto reductase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534434|gb|EGB24218.1| aldo/keto reductase [Thermoanaerobacterium xylanolyticum LX-11] Length = 379 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 12/157 (7%) Query: 99 ACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSH 158 A VK V+ P +S++ + M S + +L+ Sbjct: 228 ASVKRTPAEWALQWVWNHPEVSLVLSGMSTMEQVKQNIESASRSKANGLTENEVKLVDKV 287 Query: 159 EDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNL 218 + + C C C CP+ + A+ +A+ + E L N Sbjct: 288 RETYERLSPVGCTACNYCMP-CPNGVNIPKNF---AVYNEAHMYNNY------DEALRNY 337 Query: 219 ED--PFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMM 253 + + C C CP+ L + ++ Sbjct: 338 NNLNEGKASSCIECGECETKCPQHLTIIDYLKDVRRY 374 >gi|312962429|ref|ZP_07776920.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] gi|311283356|gb|EFQ61946.1| iron-sulfur cluster-binding protein [Pseudomonas fluorescens WH6] Length = 307 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP + S + +++ D R E +G R + L C C Sbjct: 58 CIYMCPYARFQSVMFDKDTLIVSY-----DPRRGELRGPRKKGADYQAQGLGDCIDCTMC 112 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 113 VQVCPTGIDIRD 124 >gi|317153661|ref|YP_004121709.1| ferredoxin-dependent glutamate synthase [Desulfovibrio aespoeensis Aspo-2] gi|316943912|gb|ADU62963.1| ferredoxin-dependent glutamate synthase [Desulfovibrio aespoeensis Aspo-2] Length = 544 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 22/88 (25%), Gaps = 5/88 (5%) Query: 161 RQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLED 220 Q + C C C+ CP + I + ++ + Sbjct: 19 WQIKWDIATCTKCGRCTAVCPVNAIELGVFRKREINAP---MGLQAKPSNTFSVYYGIRQ 75 Query: 221 -PFRLYRCHTIMNCTQSCPKG-LNPAKA 246 Y C C CP + P + Sbjct: 76 RTDPAYACIGCAMCAMVCPNNAIEPTRQ 103 >gi|221213583|ref|ZP_03586557.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD1] gi|221166372|gb|EED98844.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD1] Length = 983 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 14/92 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +C++C C +C + G L A R +S Sbjct: 172 DGANHLHDRKDESNPYFTYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFES 223 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R +PF C + C +CP Sbjct: 224 RVAAGE------SEPFMESECVSCGACVAACP 249 >gi|223934850|ref|ZP_03626769.1| FAD linked oxidase domain protein [bacterium Ellin514] gi|223896303|gb|EEF62745.1| FAD linked oxidase domain protein [bacterium Ellin514] Length = 1052 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 8/104 (7%) Query: 145 TVSPKPAKELLQSHEDRQKIDGLY-ECVMCACCSTS-----CPSYWWNSDRYLGPAILLQ 198 P Q DR CV C CPSY + + Sbjct: 567 DYDPPNPTTYFQYPADRHTFSRAALRCVGIGECRRHSDQVMCPSYQVTMEEKHSTRGRAR 626 Query: 199 AYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLN 242 +++ +G + + + L C C CP ++ Sbjct: 627 LLWEMLNGGLLKKGWKNEAV--KEALDLCLACKGCKHDCPVNVD 668 >gi|332999463|gb|EGK19048.1| formate hydrogenlyase subunit 6 [Shigella flexneri VA-6] Length = 180 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|330876064|gb|EGH10213.1| FixG-like protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 470 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 7/72 (9%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSR-DEFQGERLDNLE-DPFRLYRCHTIMNC 233 C CP Y L+ +Y D R E +G R + L C C Sbjct: 222 CIYMCP-YARFQSVMFDKDTLVISY----DPRRGEPRGPRKKETDYQAQGLGDCIDCTLC 276 Query: 234 TQSCPKGLNPAK 245 Q CP G++ Sbjct: 277 VQVCPTGIDIRD 288 >gi|327482947|gb|AEA77354.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Vibrio cholerae LMA3894-4] Length = 474 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 ALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVA-------RGEQRGPRSRK 264 Query: 218 LE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|299146441|ref|ZP_07039509.1| putative [Fe] hydrogenase, large subunit HymC [Bacteroides sp. 3_1_23] gi|298516932|gb|EFI40813.1| putative [Fe] hydrogenase, large subunit HymC [Bacteroides sp. 3_1_23] Length = 588 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 51/208 (24%), Gaps = 35/208 (16%) Query: 54 NCGPMVLDGLLYIKNKIDPTLTLRRSCRE-----GICGSCGMNIDGTNTLACVKDMK--- 105 G +L+ + I I + C C + + G LA + Sbjct: 18 PEGSTILEAAIKIGINIPTLCHIDLKGTCIKNNPASCRICVVEVMGRRNLAPACATRCTE 77 Query: 106 -DIKGAIAVYPLPHMSVIKDLVVDMSHFY------------SQHRSIEPWLKTVSPKPAK 152 + + + V+ +L++ + Sbjct: 78 GMVVKTSTLRVMNARKVVAELILSDHPNDCLTCPKCGNCELQTLALRFNIREMPFNGGEL 137 Query: 153 ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQG 212 + + + +C+ C C + C L A R ++ Sbjct: 138 SPRKREITASIVRNMDKCIFCRRCESVCNDVQTVG--------ALGAIRRGFNTTIAPAF 189 Query: 213 ERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 +R+ + + C C CP G Sbjct: 190 DRM--MTESE----CTYCGQCVAVCPVG 211 >gi|293568092|ref|ZP_06679429.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1071] gi|291589174|gb|EFF20985.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Enterococcus faecium E1071] Length = 1230 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 35/143 (24%), Gaps = 8/143 (5%) Query: 103 DMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDR- 161 + ++ + V + L + +Q ++ S E R Sbjct: 620 HWRTLEMPEKINKRNTGYVQEILEPVNAQEGNQLSVGTLVANGMTTGEMPLGTASMEKRG 679 Query: 162 ----QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 C MC C+ CP + +++ G + Sbjct: 680 VALEVPQWISDRCTMCNECAFVCPHAAIRPFLADEEEMEEAPEGFIVREMRGADGVKYRI 739 Query: 218 LEDPFRLYRCHTIMNCTQSCPKG 240 + C C ++CP Sbjct: 740 QV---SVEDCTGCGLCVEACPAK 759 >gi|257459158|ref|ZP_05624277.1| 4Fe-4S binding domain protein [Campylobacter gracilis RM3268] gi|257443543|gb|EEV18667.1| 4Fe-4S binding domain protein [Campylobacter gracilis RM3268] Length = 401 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 27/115 (23%), Gaps = 19/115 (16%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHE-DRQKIDGLYECVMCACCSTSCPSY 183 L V + + + + S H+ R G C+ C C C + Sbjct: 36 LWVVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVAN 95 Query: 184 WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 + LG R L RC C CP Sbjct: 96 CIAMETSLG------------------SDGRKKVDNYSINLGRCVYCGLCADVCP 132 >gi|268678788|ref|YP_003303219.1| NADH-quinone oxidoreductase, chain I [Sulfurospirillum deleyianum DSM 6946] gi|268616819|gb|ACZ11184.1| NADH-quinone oxidoreductase, chain I [Sulfurospirillum deleyianum DSM 6946] Length = 204 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 28/114 (24%), Gaps = 18/114 (15%) Query: 125 LVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYW 184 L V + + + R G C+ C C C Sbjct: 47 LWVVLREMIRFDIHTLKYPSEKMEMGPRYRAIHRLLRLFESGSERCIGCGLCEKIC---- 102 Query: 185 WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 A +++R + + R + + RC C + CP Sbjct: 103 -------------IAKCIRMETRIDEKS-RKEVSQYSINFGRCIFCGYCAEVCP 142 >gi|221201244|ref|ZP_03574284.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD2M] gi|221206302|ref|ZP_03579315.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD2] gi|221173611|gb|EEE06045.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD2] gi|221179094|gb|EEE11501.1| formate dehydrogenase, NAD-dependent, alpha subunit [Burkholderia multivorans CGD2M] Length = 983 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 14/92 (15%) Query: 147 SPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDS 206 + + +C++C C +C + G L A R +S Sbjct: 172 DGANHLHDRKDESNPYFTYDPSKCIVCNRCVRAC-------EETQGTFALTIAAR-GFES 223 Query: 207 RDEFQGERLDNLEDPFRLYRCHTIMNCTQSCP 238 R +PF C + C +CP Sbjct: 224 RVAAGE------SEPFMESECVSCGACVAACP 249 >gi|218701212|ref|YP_002408841.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli IAI39] gi|218371198|emb|CAR19029.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli IAI39] Length = 180 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 22/70 (31%) Query: 169 ECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCH 228 +C+ CA C +CPS + D GE L F L RC Sbjct: 39 QCIGCAACVNACPSNALTVET------------------DLATGE----LAWEFNLGRCI 76 Query: 229 TIMNCTQSCP 238 C + CP Sbjct: 77 FCGRCEEVCP 86 >gi|193222326|emb|CAL61798.2| Putative ferredoxin [Herminiimonas arsenicoxydans] Length = 472 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 3/74 (4%) Query: 176 CSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQ 235 C CP + S + ++++ + + R E +L C C Q Sbjct: 218 CKYMCPYARFQSSMFDKDSLIITYDQKRGEPRGMPGK---SASETDKKLGDCIDCTMCVQ 274 Query: 236 SCPKGLNPAKAIAK 249 CP G++ + Sbjct: 275 VCPVGIDIRDGLQY 288 >gi|118444967|ref|YP_878935.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] gi|118135423|gb|ABK62467.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] Length = 494 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 29/100 (29%), Gaps = 18/100 (18%) Query: 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFR 223 C C C CP Y S+ + I +D R + D Sbjct: 134 YINQDVCRECGMCKQVCP-YNAISEVMRPCKKVCPTEAICISPQD-----RRAEINDEE- 186 Query: 224 LYRCHTIMNCTQSCPKG--------LNPAKAIAKIKMMLL 255 C + C ++CP G + +AI K + Sbjct: 187 ---CISCGACMKACPFGAISDKSYIVPVVEAIKNNKKVYA 223 >gi|255746782|ref|ZP_05420728.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholera CIRS 101] gi|262155863|ref|ZP_06028985.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholerae INDRE 91/1] gi|262166906|ref|ZP_06034627.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholerae RC27] gi|255735539|gb|EET90938.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholera CIRS 101] gi|262024677|gb|EEY43357.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholerae RC27] gi|262030315|gb|EEY48957.1| type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation [Vibrio cholerae INDRE 91/1] Length = 474 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 24/93 (25%), Gaps = 11/93 (11%) Query: 161 RQKIDGLYECVMCACCSTSCPSYW---WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDN 217 G + C CP D+ A R E +G R Sbjct: 212 ALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVA-------RGEQRGPRSRK 264 Query: 218 LE-DPFRLYRCHTIMNCTQSCPKGLNPAKAIAK 249 + L C C Q CP G++ + Sbjct: 265 ADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQY 297 >gi|50120179|ref|YP_049346.1| hydrogenase 4 subunit H [Pectobacterium atrosepticum SCRI1043] gi|49610705|emb|CAG74150.1| hydrogenase-4 component H [Pectobacterium atrosepticum SCRI1043] Length = 183 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 22/86 (25%), Gaps = 27/86 (31%) Query: 163 KIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPF 222 +C+ C C+ +CP+ + + Sbjct: 34 PEYDAQQCIACGACTIACPANALTMETDIETGARTWQLF--------------------- 72 Query: 223 RLYRCHTIMNCTQSCPKGLNPAKAIA 248 L RC C + CP +AI Sbjct: 73 -LGRCIFCGRCEEVCP-----TRAIQ 92 >gi|117923368|ref|YP_863985.1| Fe-S oxidoreductase [Magnetococcus sp. MC-1] gi|117607124|gb|ABK42579.1| Fe-S oxidoreductase [Magnetococcus sp. MC-1] Length = 500 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 40/130 (30%), Gaps = 15/130 (11%) Query: 137 RSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAIL 196 +E W + K + R + CV C C+ C Y D P Sbjct: 45 ERVENWQQAGIEKFGD---LLSKYRSLQVFMDICVKCGSCTDKCHYYLGTQDPNNMPVQR 101 Query: 197 LQAYRW-----------LIDSRDEFQGERLDNLEDPFRLYR-CHTIMNCTQSCPKGLNPA 244 + R L S + + LE F + C C+ CP G++ A Sbjct: 102 AELMREVYRRYFTPGGKLFPSLVKASDFNEETLEKWFTYFHQCSQCRRCSVFCPYGIDTA 161 Query: 245 KAIAKIKMML 254 + + ++ Sbjct: 162 EVTMAARELM 171 >gi|15803237|ref|NP_289269.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 EDL933] gi|15832830|ref|NP_311603.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. Sakai] gi|74313287|ref|YP_311706.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sonnei Ss046] gi|82545205|ref|YP_409152.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella boydii Sb227] gi|110806653|ref|YP_690173.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella flexneri 5 str. 8401] gi|157162166|ref|YP_001459484.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli HS] gi|168749955|ref|ZP_02774977.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4113] gi|168755465|ref|ZP_02780472.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4401] gi|168762881|ref|ZP_02787888.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4501] gi|168768811|ref|ZP_02793818.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4486] gi|168774748|ref|ZP_02799755.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4196] gi|168778702|ref|ZP_02803709.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4076] gi|168787975|ref|ZP_02812982.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC869] gi|168800199|ref|ZP_02825206.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC508] gi|170019034|ref|YP_001723988.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli ATCC 8739] gi|188492377|ref|ZP_02999647.1| iron-sulfur binding domain protein [Escherichia coli 53638] gi|191166826|ref|ZP_03028652.1| formate hydrogenlyase, subunit F [Escherichia coli B7A] gi|193065016|ref|ZP_03046091.1| formate hydrogenlyase, subunit F [Escherichia coli E22] gi|194427901|ref|ZP_03060447.1| formate hydrogenlyase, subunit F [Escherichia coli B171] gi|194438985|ref|ZP_03071069.1| formate hydrogenlyase, subunit F [Escherichia coli 101-1] gi|195938470|ref|ZP_03083852.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. EC4024] gi|208805909|ref|ZP_03248246.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4206] gi|208813713|ref|ZP_03255042.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4045] gi|208818938|ref|ZP_03259258.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4042] gi|209396172|ref|YP_002272183.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4115] gi|217327035|ref|ZP_03443118.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. TW14588] gi|218547772|ref|YP_002381563.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia fergusonii ATCC 35469] gi|253772425|ref|YP_003035256.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037759|ref|ZP_04871817.1| formate hydrogenlyase [Escherichia sp. 1_1_43] gi|254162651|ref|YP_003045759.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B str. REL606] gi|254794660|ref|YP_003079497.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. TW14359] gi|260845363|ref|YP_003223141.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O103:H2 str. 12009] gi|261226014|ref|ZP_05940295.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256728|ref|ZP_05949261.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O157:H7 str. FRIK966] gi|291284047|ref|YP_003500865.1| Formate hydrogenlyase, subunit F [Escherichia coli O55:H7 str. CB9615] gi|293415970|ref|ZP_06658610.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B185] gi|300930578|ref|ZP_07145970.1| hydrogenase 4 subunit H [Escherichia coli MS 187-1] gi|301027130|ref|ZP_07190499.1| hydrogenase 4 subunit H [Escherichia coli MS 69-1] gi|307312857|ref|ZP_07592487.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309795180|ref|ZP_07689599.1| hydrogenase 4 subunit H [Escherichia coli MS 145-7] gi|312973070|ref|ZP_07787243.1| formate hydrogenlyase subunit 6 [Escherichia coli 1827-70] gi|331654197|ref|ZP_08355197.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli M718] gi|331674228|ref|ZP_08374988.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA280] gi|331684333|ref|ZP_08384925.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H299] gi|12517168|gb|AAG57827.1|AE005500_6 probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) [Escherichia coli O157:H7 str. EDL933] gi|13363047|dbj|BAB36999.1| formate hydrogenlyase subunit-7 component F [Escherichia coli O157:H7 str. Sakai] gi|73856764|gb|AAZ89471.1| probable iron-sulfur protein of hydrogenase 3 [Shigella sonnei Ss046] gi|81246616|gb|ABB67324.1| probable iron-sulfur protein of hydrogenase 3 [Shigella boydii Sb227] gi|110616201|gb|ABF04868.1| probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) [Shigella flexneri 5 str. 8401] gi|157067846|gb|ABV07101.1| formate hydrogenlyase, subunit F [Escherichia coli HS] gi|169753962|gb|ACA76661.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|187769586|gb|EDU33430.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4196] gi|188015821|gb|EDU53943.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4113] gi|188487576|gb|EDU62679.1| iron-sulfur binding domain protein [Escherichia coli 53638] gi|189003527|gb|EDU72513.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4076] gi|189357266|gb|EDU75685.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4401] gi|189362055|gb|EDU80474.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4486] gi|189366888|gb|EDU85304.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4501] gi|189372135|gb|EDU90551.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC869] gi|189377500|gb|EDU95916.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC508] gi|190903197|gb|EDV62920.1| formate hydrogenlyase, subunit F [Escherichia coli B7A] gi|192927313|gb|EDV81932.1| formate hydrogenlyase, subunit F [Escherichia coli E22] gi|194414134|gb|EDX30410.1| formate hydrogenlyase, subunit F [Escherichia coli B171] gi|194422106|gb|EDX38109.1| formate hydrogenlyase, subunit F [Escherichia coli 101-1] gi|208725710|gb|EDZ75311.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4206] gi|208734990|gb|EDZ83677.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4045] gi|208739061|gb|EDZ86743.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4042] gi|209157572|gb|ACI35005.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4115] gi|209761900|gb|ACI79262.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761902|gb|ACI79263.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761904|gb|ACI79264.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761906|gb|ACI79265.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|217319402|gb|EEC27827.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. TW14588] gi|218355313|emb|CAQ87920.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia fergusonii ATCC 35469] gi|222034414|emb|CAP77156.1| Formate hydrogenlyase subunit 6 [Escherichia coli LF82] gi|226839383|gb|EEH71404.1| formate hydrogenlyase [Escherichia sp. 1_1_43] gi|242378277|emb|CAQ33052.1| formate hydrogenlyase complex iron-sulfur protein, subunit of hydrogenase 3 and formate hydrogenlyase complex [Escherichia coli BL21(DE3)] gi|253323469|gb|ACT28071.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974552|gb|ACT40223.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli B str. REL606] gi|253978719|gb|ACT44389.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli BL21(DE3)] gi|254594060|gb|ACT73421.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli O157:H7 str. TW14359] gi|257760510|dbj|BAI32007.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O103:H2 str. 12009] gi|290763920|gb|ADD57881.1| Formate hydrogenlyase, subunit F [Escherichia coli O55:H7 str. CB9615] gi|291432159|gb|EFF05141.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B185] gi|300395162|gb|EFJ78700.1| hydrogenase 4 subunit H [Escherichia coli MS 69-1] gi|300461520|gb|EFK25013.1| hydrogenase 4 subunit H [Escherichia coli MS 187-1] gi|306907292|gb|EFN37798.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|308121151|gb|EFO58413.1| hydrogenase 4 subunit H [Escherichia coli MS 145-7] gi|309703079|emb|CBJ02411.1| formate hydrogenlyase subunit 6 [Escherichia coli ETEC H10407] gi|310333012|gb|EFQ00226.1| formate hydrogenlyase subunit 6 [Escherichia coli 1827-70] gi|312947249|gb|ADR28076.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315061996|gb|ADT76323.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli W] gi|315298792|gb|EFU58046.1| hydrogenase 4 subunit H [Escherichia coli MS 16-3] gi|320173427|gb|EFW48626.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Shigella dysenteriae CDC 74-1112] gi|320186506|gb|EFW61234.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Shigella flexneri CDC 796-83] gi|320189052|gb|EFW63711.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia