HHsearch alignment for GI: 254781047 and conserved domain: CHL00095

>CHL00095 clpC Clp protease ATP binding subunit.
Probab=93.91  E-value=0.53  Score=26.42  Aligned_cols=114  Identities=21%  Similarity=0.213  Sum_probs=68.1

Q ss_pred             CCCCCCE-EEEECCCCCCHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCCHHHHHHH
Q ss_conf             6668864-998888877289999999985781--11468889999999999999971311----2246655780789999
Q gi|254781047|r   62 KYCSMQG-IYLHGDVGQGKSMLMNLFFALVPI--EKKCRLHFYEFMKDVHSRIIMYRKKI----EFGEILESDPIPLVAS  134 (404)
Q Consensus        62 ~~~~~kG-lYL~G~VG~GKT~LMdlFy~~l~~--~~K~R~HFh~FM~~ih~~l~~~~~~~----~~~~~~~~dpl~~va~  134 (404)
T Consensus       534 ~~~rPigsFlf~GPTGvGKTElAK~LA~~LFg~e~~liR~DMSEy~E~--hsvsrLIGaPPGYVGy~eGG~--LTeaV--  607 (823)
T CHL00095        534 NPNRPIASFIFCGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMEK--HTVSKLIGSPPGYVGYNEGGQ--LTEAV--  607 (823)
T ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC--CCHHHHCCCCCCCCCCCCCCC--HHHHH--
T ss_conf             899974689987899887799999999997478202588535101554--207674589987667787882--01988--


Q ss_pred             HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHC--------------CCEEEEECCCCHHHHHC
Q ss_conf             99613879998423204713588899999999854--------------96899817868677523
Q gi|254781047|r  135 SIALESRVLCFDEFMITNIADAIILSRLFAALFSH--------------GCIIVMTSNFIPENLYK  186 (404)
Q Consensus       135 ~l~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~--------------gv~lV~TSN~~P~dLY~  186 (404)
T Consensus       608 -rr~PysVvLfDEIEKAH---pdV~nilLQ-vlDdG~LtD~~Gr~vdF~NtIIImTSNlGs~~i~~  668 (823)
T CHL00095        608 -RKKPYTVVLFDEIEKAH---PDIFNLLLQ-ILDDGRLTDSKGRTIDFKNTLIIMTSNLGSKVIEK  668 (823)
T ss_pred             -HCCCCEEEEECHHHHCC---HHHHHHHHH-HCCCCCCCCCCCCEEECEEEEEEECCCCCHHHHHH
T ss_conf             -71998699862131138---899998876-51688434899998843103999716505588874