HHsearch alignment for GI: 254781047 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=99.02 E-value=2.5e-09 Score=79.25 Aligned_cols=126 Identities=20% Similarity=0.274 Sum_probs=82.3
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 86499888887728999999998578----11146888999999999999997131122466557807899999961387
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVP----IEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESR 141 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~----~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~ 141 (404)
T Consensus 113 ~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~---a~~~----------~~~~~Fk~~y--~~d 177 (408)
T COG0593 113 YNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVK---ALRD----------NEMEKFKEKY--SLD 177 (408)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH---HHHH----------HHHHHHHHHH--CCC
T ss_conf 895799879999789999999999986299864885048998999999---9885----------0488888764--267
Q ss_pred EEEEEEEEEC--CCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCC-H--HHHHHHHHHHHHCCEEEECCCCCHH
Q ss_conf 9998423204--713588899999999854968998178686775238740-5--6689899999850508980473112
Q gi|254781047|r 142 VLCFDEFMIT--NIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEIN-R--NVLVSFIELLEKKLEIISLDSGQDY 216 (404)
Q Consensus 142 lLCfDEF~V~--DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLq-R--~~FlPfI~~lk~~~~V~~l~~~~DY 216 (404)
T Consensus 178 lllIDDiq~l~gk~~~qeefFh~FN~l~~~~kqIvltsdr~P~~l--~~~~~rL~SR~--------~~Gl~~~I~~Pd~e 247 (408)
T COG0593 178 LLLIDDIQFLAGKERTQEEFFHTFNALLENGKQIVLTSDRPPKEL--NGLEDRLRSRL--------EWGLVVEIEPPDDE 247 (408)
T ss_pred EEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH--CCCCHHHHHHH--------HCEEEEEECCCCHH
T ss_conf 355513867567715799999999988850887999707883221--10358899898--------63057752798889