HHsearch alignment for GI: 254781047 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=97.49 E-value=0.0011 Score=43.39 Aligned_cols=122 Identities=25% Similarity=0.297 Sum_probs=70.2
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCH---H----HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 886499888887728999999998578111---4----688899999999999999713112246655780789999996
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEK---K----CRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIA 137 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~---K----~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~ 137 (404)
T Consensus 150 APknVLFyGppGTGKTm~Akalane~kvp~l~vkat~liGehVGdgar~Ihely~rA~~~a------------------- 210 (368)
T COG1223 150 APKNVLFYGPPGTGKTMMAKALANEAKVPLLLVKATELIGEHVGDGARRIHELYERARKAA------------------- 210 (368)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------
T ss_conf 7541687789996487999987254578548711688888774359899999999887519-------------------
Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHH-------------------HHCCCEEEEECCCCHHHHHCCCCCHHHHHHHH
Q ss_conf 13879998423204713588899999999-------------------85496899817868677523874056689899
Q gi|254781047|r 138 LESRVLCFDEFMITNIADAIILSRLFAAL-------------------FSHGCIIVMTSNFIPENLYKDEINRNVLVSFI 198 (404)
Q Consensus 138 ~~~~lLCfDEF~V~DiaDAmil~rl~~~l-------------------f~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI 198 (404)
T Consensus 211 --PcivFiDE~------DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p-~~L--D~aiRsRFEeEI 279 (368)
T COG1223 211 --PCIVFIDEL------DAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRP-ELL--DPAIRSRFEEEI 279 (368)
T ss_pred --CEEEEEHHH------HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCH-HHC--CHHHHHHHHHEE
T ss_conf --849984002------455530457886454999999999850174457756999505984-650--788886556506
Q ss_pred -----------HHHHHCCEEEECCCCCHH
Q ss_conf -----------999850508980473112
Q gi|254781047|r 199 -----------ELLEKKLEIISLDSGQDY 216 (404)
Q Consensus 199 -----------~~lk~~~~V~~l~~~~DY 216 (404)
T Consensus 280 EF~LP~~eEr~~ile~y~k~~Plpv~~~~ 308 (368)
T COG1223 280 EFKLPNDEERLEILEYYAKKFPLPVDADL 308 (368)
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 56488858999999998985897655689