HHsearch alignment for GI: 254781047 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].

Probab=96.18  E-value=0.018  Score=35.80  Aligned_cols=113  Identities=16%  Similarity=0.105  Sum_probs=52.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCHHHHH-------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC--
Q ss_conf             4998888877289999999985781114688-------8999999999999997131122466557807899999961--
Q gi|254781047|r   68 GIYLHGDVGQGKSMLMNLFFALVPIEKKCRL-------HFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIAL--  138 (404)
Q Consensus        68 GlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~-------HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~--  138 (404)
T Consensus        44 n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t-~~~i~~~i~~~~~~~p~~g~~~~~~~~~l~~~~~~~~  122 (366)
T COG1474          44 NIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRT-PYQVLSKILNKLGKVPLTGDSSLEILKRLYDNLSKKG  122 (366)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             079988999873289999999997331567579995130787-8799999999826899767632689999999777418


Q ss_pred             CCCEEEEEEEEECCCHHHHHHHHHHHHHH--HCCCEEEEECCCCH
Q ss_conf             38799984232047135888999999998--54968998178686
Q gi|254781047|r  139 ESRVLCFDEFMITNIADAIILSRLFAALF--SHGCIIVMTSNFIP  181 (404)
Q Consensus       139 ~~~lLCfDEF~V~DiaDAmil~rl~~~lf--~~gv~lV~TSN~~P  181 (404)
T Consensus       123 ~~~IvvLDEid~L~~~~~~~LY~L~r~~~~~~~~v~vi~i~n~~~  167 (366)
T COG1474         123 KTVIVILDEVDALVDKDGEVLYSLLRAPGENKVKVSIIAVSNDDK  167 (366)
T ss_pred             CEEEEEECCHHHHHCCCCCHHHHEECCCCCCCEEEEEEEEECCHH
T ss_conf             759999764765415464145511124776753799999735488