HHsearch alignment for GI: 254781047 and conserved domain: COG1484

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=99.15  E-value=3.1e-09  Score=78.72  Aligned_cols=142  Identities=13%  Similarity=0.135  Sum_probs=97.7

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             886499888887728999999998578111468---88999999999999997131122466557807899999961387
Q gi|254781047|r   65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCR---LHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESR  141 (404)
Q Consensus        65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R---~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~  141 (404)
T Consensus       104 ~~~nl~l~G~~G~GKthLa~Ai~~~l~-~~g~sv~f~~~~el~~~Lk~~~~~-------------~~~~~~l~~~l~~~d  169 (254)
T COG1484         104 RGENLVLLGPPGVGKTHLAIAIGNELL-KAGISVLFITAPDLLSKLKAAFDE-------------GRLEEKLLRELKKVD  169 (254)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHH-HCCCEEEEEEHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHCC
T ss_conf             588289989999879999999999999-839849998859999999998745-------------526899998875289


Q ss_pred             EEEEEEEEE--CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHC
Q ss_conf             999842320--471358889999999985496899817868677523874056689899999850508980473112211
Q gi|254781047|r  142 VLCFDEFMI--TNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDSGQDYRRK  219 (404)
Q Consensus       142 lLCfDEF~V--~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~~~DYR~~  219 (404)
T Consensus       170 lLIiDDlG~~~~~~~~~~~~~q~I~~r~~~~~~-~~tsN~~~~~~~~~~~~~~~~e~~~dRi~~~~~~~~~~-g~s~rl~  247 (254)
T COG1484         170 LLIIDDIGYEPFSQEEADLLFQLISRRYESRSL-IITSNLSFGEWDELFGDDALTEALLDRILHHSHVIVIK-GESYRLN  247 (254)
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEC-CHHHHHH
T ss_conf             899823677668815587999999999973054-20205882788866067511689999998616103761-5167653


Q ss_pred             CCC
Q ss_conf             236
Q gi|254781047|r  220 EQS  222 (404)
Q Consensus       220 ~~~  222 (404)
T Consensus       248 ~~~  250 (254)
T COG1484         248 VRR  250 (254)
T ss_pred             CCC
T ss_conf             022