HHsearch alignment for GI: 254781047 and conserved domain: COG2255
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair].
Probab=95.20 E-value=0.12 Score=30.52 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=41.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 68864998888877289999999985781114688899999999999999713112246655780789999996138799
Q gi|254781047|r 64 CSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVL 143 (404)
Q Consensus 64 ~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lL 143 (404)
T Consensus 50 e~lDHvLl~GPPGlGKTTLA~IIA~Emgvn~--------------------k~tsGp~leK~gDlaaiL--t~Le~~DVL 107 (332)
T COG2255 50 EALDHVLLFGPPGLGKTTLAHIIANELGVNL--------------------KITSGPALEKPGDLAAIL--TNLEEGDVL 107 (332)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCE--------------------EECCCCCCCCHHHHHHHH--HCCCCCCEE
T ss_conf 8767478647998768889999999856773--------------------763662015726599998--639867767
Q ss_pred EEEEEEECCCHHHHHH
Q ss_conf 9842320471358889
Q gi|254781047|r 144 CFDEFMITNIADAIIL 159 (404)
Q Consensus 144 CfDEF~V~DiaDAmil 159 (404)
T Consensus 108 FIDEIHrl~~~vEE~L 123 (332)
T COG2255 108 FIDEIHRLSPAVEEVL 123 (332)
T ss_pred EEEHHHHCCHHHHHHH
T ss_conf 7725531474289896