HHsearch alignment for GI: 254781047 and conserved domain: PRK00080

Probab=95.10  E-value=0.12  Score=30.58  Aligned_cols=108  Identities=20%  Similarity=0.177  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             89999999999999998613543332256643102466666688649988888772899999999857811146888999
Q gi|254781047|r   23 PAQESVVKSFDRLLVDLYKQQKQEQGIFSWLWNLRGIKRKYCSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYE  102 (404)
Q Consensus        23 ~~Q~~~i~~L~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~  102 (404)
T Consensus        28 iGQ~~i~~~L~v~i~Aak~--------------------r~e~ldH~Ll~GPPGlGKTTLA~iiA~E~~~~~--------   79 (328)
T PRK00080         28 IGQEKVKENLKIFIEAAKK--------------------RGEALDHVLLYGPPGLGKTTLANIIANEMGVNI--------   79 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHH--------------------CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC--------
T ss_conf             5959999999999999996--------------------499988057658899889999999999868881--------


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             9999999999971311224665578078999999613879998423204713588899999999854968998
Q gi|254781047|r  103 FMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVM  175 (404)
Q Consensus       103 FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~  175 (404)
T Consensus        80 ---------~~---tsGP~lek~~DL~~iL--t~l~~~dvLFIDEIHRl~~~vEE~---LY~AMEDf~iDi~i  135 (328)
T PRK00080         80 ---------RI---TSGPALEKAGDLAALL--TNLEEGDVLFIDEIHRLSPVVEEI---LYPAMEDFRLDIMI  135 (328)
T ss_pred             ---------EE---CCCCCCCCHHHHHHHH--HHCCCCCEEEEHHHHHCCHHHHHH---HHHHHHHCEEEEEE
T ss_conf             ---------56---2450016747899999--608878767650653248889988---57987752345786