HHsearch alignment for GI: 254781047 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=97.79 E-value=0.00013 Score=49.32 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=61.1
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCH-HHH-H--------HHHHHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHH
Q ss_conf 886499888887728999999998578111-468-8--------899999999999999713112-24665578078999
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEK-KCR-L--------HFYEFMKDVHSRIIMYRKKIE-FGEILESDPIPLVA 133 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~-K~R-~--------HFh~FM~~ih~~l~~~~~~~~-~~~~~~~dpl~~va 133 (404)
T Consensus 54 ~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i~~~i~~~L---~~~~~p~~G~s~~~~~~~l~ 130 (394)
T PRK00411 54 RPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAILSEIARSL---FGHPPPSSGLSFDELFDKIA 130 (394)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH---CCCCCCCCCCCHHHHHHHHH
T ss_conf 998479988999989999999999999746896599996966898999999999995---69989877878999999999
Q ss_pred HHHHCCC--CEEEEEEEEE-CCCHHHHHHHHHHHH---HHHCCCEEEEECCCC
Q ss_conf 9996138--7999842320-471358889999999---985496899817868
Q gi|254781047|r 134 SSIALES--RVLCFDEFMI-TNIADAIILSRLFAA---LFSHGCIIVMTSNFI 180 (404)
Q Consensus 134 ~~l~~~~--~lLCfDEF~V-~DiaDAmil~rl~~~---lf~~gv~lV~TSN~~ 180 (404)
T Consensus 131 ~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~~~~~~~~~vI~IsN~~ 183 (394)
T PRK00411 131 EYLDERDRVLIVALDDINYLVEKEGNDVLYSLLRAHEEYPGARIGVIGISSDL 183 (394)
T ss_pred HHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCC
T ss_conf 98616697589999655402036650899999854022688738999997687