HHsearch alignment for GI: 254781047 and conserved domain: PRK04841
>PRK04841 transcriptional regulator MalT; Provisional.
Probab=94.21 E-value=0.47 Score=26.72 Aligned_cols=115 Identities=12% Similarity=0.093 Sum_probs=55.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCCCCCHHHH---
Q ss_conf 86499888887728999999998578------111468889999999999999971311-----2246655780789---
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVP------IEKKCRLHFYEFMKDVHSRIIMYRKKI-----EFGEILESDPIPL--- 131 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~------~~~K~R~HFh~FM~~ih~~l~~~~~~~-----~~~~~~~~dpl~~--- 131 (404)
T Consensus 32 ~~l~lv~APaG~GKTtl~a~w~~~~~~~~Wlsld~~-d~~~~~f~~~l~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (903)
T PRK04841 32 YRLVLVRSPAGYGKTTLASQWAAGKNNVGWYSLDES-DNQPERFASYLIAALQQATNGHCSKSEALAEKRQYASLTSLFA 110 (903)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHH
T ss_conf 997999779998899999999834998599858854-4899999999999999856543311231135566554999999
Q ss_pred -HHHHHHCC--CCEEEEEEEEE-CCCHHHHHHHHHHHHHHHCCCEEEEECC-CCHH
Q ss_conf -99999613--87999842320-4713588899999999854968998178-6867
Q gi|254781047|r 132 -VASSIALE--SRVLCFDEFMI-TNIADAIILSRLFAALFSHGCIIVMTSN-FIPE 182 (404)
Q Consensus 132 -va~~l~~~--~~lLCfDEF~V-~DiaDAmil~rl~~~lf~~gv~lV~TSN-~~P~ 182 (404)
T Consensus 111 ~l~~~l~~~~~~~~lvlDD~h~i~~~~~~~~l~~Ll~~~p~-~l~lvl~sR~~p~l 165 (903)
T PRK04841 111 QLFIELSDWHQPLYLVLDDYHLITNPEIHEAMRFFLRHQPE-NLTLVVLSRNLPPL 165 (903)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC-CEEEEEEECCCCCC
T ss_conf 99999755899869998683648886899999999983898-83899876899987