HHsearch alignment for GI: 254781047 and conserved domain: PRK05642

>PRK05642 DNA replication initiation factor; Validated.
Probab=98.94  E-value=4.6e-09  Score=77.57  Aligned_cols=97  Identities=19%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             64998888877289999999985781114688899999999999999713112246655780789999996138799984
Q gi|254781047|r   67 QGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLCFD  146 (404)
Q Consensus        67 kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLCfD  146 (404)
T Consensus        46 ~~l~i~G~~G~GKTHLL~A~~~~~~~~~-~~~~yl~~-~~~~~~~-----------------~~--~~~~l~~~d~l~ID  104 (234)
T PRK05642         46 SLIYLWGKDGVGRSHLLQAACLRFEQRG-EPAVYLPL-AELLDRG-----------------PE--LLDNLEQYELVCID  104 (234)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEEH-HHHHHHH-----------------HH--HHHHHHHCCEEEEE
T ss_conf             8389988999988999999999998079-96799789-9987544-----------------99--98624227989893


Q ss_pred             EEEEC--CCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf             23204--713588899999999854968998178686775
Q gi|254781047|r  147 EFMIT--NIADAIILSRLFAALFSHGCIIVMTSNFIPENL  184 (404)
Q Consensus       147 EF~V~--DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dL  184 (404)
T Consensus       105 Di~~i~g~~~~e~~lF~l~N~~~~~~~~llits~~~P~~l  144 (234)
T PRK05642        105 DLDVIAGKADWEEALFHLFNRLRDSGRRLLLAASKSPREL  144 (234)
T ss_pred             CHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf             6455468859999999999999983995999578795552