HHsearch alignment for GI: 254781047 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=94.43 E-value=0.056 Score=32.59 Aligned_cols=163 Identities=19% Similarity=0.231 Sum_probs=87.4
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE-CCCCCCH
Q ss_conf 970058999999997488778989999999999999998613543332256643102466666688649988-8887728
Q gi|254781047|r 1 MSLDLVSSRLISLIQDKKLKYNPAQESVVKSFDRLLVDLYKQQKQEQGIFSWLWNLRGIKRKYCSMQGIYLH-GDVGQGK 79 (404)
Q Consensus 1 m~~~~~~~~y~~~v~~~~i~~D~~Q~~~i~~L~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kGlYL~-G~VG~GK 79 (404)
T Consensus 1 M~y~aLyrkyRP----~~F~dvvGQ~~v~~~L~nai~---~~---------------r-------i~HAyLF~GprGtGK 51 (563)
T PRK06674 1 MSYQALYRVFRP----QKFEDVVGQEHVTKTLQNALL---QE---------------K-------VSHAYLFSGPRGTGK 51 (563)
T ss_pred CCCHHHHHHHCC----CCHHHHCCHHHHHHHHHHHHH---CC---------------C-------CCCEEEEECCCCCCH
T ss_conf 952878876389----976552480999999999998---49---------------9-------650343128998689
Q ss_pred HHHHHHHHHHCCCCHHH-------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-----HCCCCEEEEEE
Q ss_conf 99999999857811146-------8889999999999999971311224665578078999999-----61387999842
Q gi|254781047|r 80 SMLMNLFFALVPIEKKC-------RLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-----ALESRVLCFDE 147 (404)
Q Consensus 80 T~LMdlFy~~l~~~~K~-------R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-----~~~~~lLCfDE 147 (404)
T Consensus 52 ts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g~~~DviEiDaa--sn--~gVd~IR~i~~~v~~~P~~~~yKV~IIDe 127 (563)
T PRK06674 52 TSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNGSISDVLEIDAA--SN--NGVDEIRDIRDKVKFAPSAVEYKVYIIDE 127 (563)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCC--CC--CCHHHHHHHHHHHCCCCCCCCEEEEEEEC
T ss_conf 999999999857999999887766878999855899877985255--55--78799999999826488678737999854
Q ss_pred EEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECC
Q ss_conf 3204713588899999999854968998178686775238740566898999998505089804
Q gi|254781047|r 148 FMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLD 211 (404)
Q Consensus 148 F~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~ 211 (404)
T Consensus 128 ah~Lt~~A~NALLKtLEEPP~~viFILaTte--p~ki-------------~~TI~SRCQrf~F~ 176 (563)
T PRK06674 128 VHMLSIGAFNALLKTLEEPPGHVIFILATTE--PHKI-------------PPTIISRCQRFDFR 176 (563)
T ss_pred HHHCCHHHHHHHHHHHHCCCCCEEEEEECCC--HHHC-------------CHHHHHHHEEEECC
T ss_conf 5637999999999986388756499996599--4758-------------47887331031278