HHsearch alignment for GI: 254781047 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=91.69 E-value=0.78 Score=25.34 Aligned_cols=148 Identities=18% Similarity=0.279 Sum_probs=79.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE-CCCCCCH
Q ss_conf 970058999999997488778989999999999999998613543332256643102466666688649988-8887728
Q gi|254781047|r 1 MSLDLVSSRLISLIQDKKLKYNPAQESVVKSFDRLLVDLYKQQKQEQGIFSWLWNLRGIKRKYCSMQGIYLH-GDVGQGK 79 (404)
Q Consensus 1 m~~~~~~~~y~~~v~~~~i~~D~~Q~~~i~~L~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kGlYL~-G~VG~GK 79 (404)
T Consensus 1 msy~vlark~RP----~~f~e~vGQ~~v~~~l~n---al~~~---------r-------------l~haylf~G~rGvGK 51 (816)
T PRK07003 1 MTYQVLARKWRP----KDFASLVGQEHVVRALTH---ALDGG---------R-------------LHHAYLFTGTRGVGK 51 (816)
T ss_pred CCCHHHHHHHCC----CCHHHHCCCHHHHHHHHH---HHHCC---------C-------------CCCEEEEECCCCCCH
T ss_conf 942777755089----857662384999999999---99709---------8-------------631475117898888
Q ss_pred HHHHHHHHHHCCCCH------------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH---HHH-----HHCC
Q ss_conf 999999998578111------------46888999999999999997131122466557807899---999-----9613
Q gi|254781047|r 80 SMLMNLFFALVPIEK------------KCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLV---ASS-----IALE 139 (404)
Q Consensus 80 T~LMdlFy~~l~~~~------------K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~v---a~~-----l~~~ 139 (404)
T Consensus 52 Tt~aRi~Ak~lnC~~~~~~~pcg~C~~C~~i~~g~~~-----d~iEiDaA-------S~~~vd~~r~l~~~~~y~p~~~r 119 (816)
T PRK07003 52 TTLSRIFAKALNCETGVTSQPCGVCRACREIDEGRFV-----DYVEMDAA-------SNRGVDEMAALLERAVYAPVDAR 119 (816)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC-----CEEEEECC-------CCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 8999999998678999998978775557877558877-----54786355-------43576899999986224786674
Q ss_pred CCEEEEEEEEECCCHHHHHHHHHHHHHH-------HCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECC
Q ss_conf 8799984232047135888999999998-------54968998178686775238740566898999998505089804
Q gi|254781047|r 140 SRVLCFDEFMITNIADAIILSRLFAALF-------SHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLD 211 (404)
Q Consensus 140 ~~lLCfDEF~V~DiaDAmil~rl~~~lf-------~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~ 211 (404)
T Consensus 120 ~KvyiiDEvH-------mls~~afnalLKtlEepP~hv~FilaTTd--~~k~-------------p~tilSRc~~f~l~ 176 (816)
T PRK07003 120 FKVYMIDEVH-------MLTNHAFNAMLKTLEEPPPHVKFILATTD--PQKI-------------PVTVLSRCLQFNLK 176 (816)
T ss_pred EEEEEEECHH-------HCCHHHHHHHHHHHCCCCCCEEEEEECCC--HHHC-------------CHHHHHHHHHCCCC
T ss_conf 4799984154-------33999999999840379866489995588--0115-------------28898777652236