HHsearch alignment for GI: 254781047 and conserved domain: PRK08084
>PRK08084 DNA replication initiation factor; Provisional.
Probab=94.82 E-value=0.19 Score=29.19 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=52.2
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 8999998537889981898787246389998999999982289-82899807897880134676531348998988745
Q gi|254781047|r 290 NDFVEIANRFDVVIINDIPLLKEDRKDWIKRFIMLIDVFYEHK-IGLIISSEENIEDLFPYKLRKGAFEIQRTVSRLYE 367 (404)
Q Consensus 290 ~DYi~Ia~~f~ti~I~~VP~l~~~~~d~arRFI~LID~lYd~k-v~Li~sa~~~~~~L~~~~~~~~~F~f~Rt~SRL~E 367 (404)
T Consensus 89 ~~~l~~l~~~dll~iDDi~~i~g~-~~~ee~lF~l~N~~~~~g~~~ll~ts~~~P~~l~----~----~l~DL~SRl~~ 158 (235)
T PRK08084 89 PEVLEGMEQLSLVCIDNIECIAGD-ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLN----L----GLPDLASRLDW 158 (235)
T ss_pred HHHHHHHHHCCEEEEECHHHHCCC-HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCC----C----CCHHHHHHHHC
T ss_conf 999987641898998274554699-7899999999999998489669996798824302----3----12889999956